-- dump date 20120504_155712 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004330139.1 331693900 10368550 121..1788 1 NC_015312.1 SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: ami:Amir_0001 chromosomal replication initiation protein; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; chromosome replication initiator DnaA 1788 10368550 Psed_0001 Pseudonocardia dioxanivorans CB1190 chromosome replication initiator DnaA YP_004330139.1 121 D 675635 CDS YP_004330140.1 331693901 10361803 2771..3901 1 NC_015312.1 SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: amd:AMED_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, C-terminal; DNA polymerase III subunit beta 3901 10361803 Psed_0002 Pseudonocardia dioxanivorans CB1190 DNA polymerase III subunit beta YP_004330140.1 2771 D 675635 CDS YP_004330141.1 331693902 10361804 4026..5168 1 NC_015312.1 TIGRFAM: DNA-binding, RecF; HAMAP: DNA-binding, RecF; KEGG: ami:Amir_0004 recombination protein F; PFAM: RecF/RecN/SMC; DNA replication and repair protein RecF 5168 10361804 Psed_0003 Pseudonocardia dioxanivorans CB1190 DNA replication and repair protein RecF YP_004330141.1 4026 D 675635 CDS YP_004330142.1 331693903 10361805 5311..5907 1 NC_015312.1 KEGG: sen:SACE_0006 hypothetical protein; HAMAP: Uncharacterised protein family UPF0232, actinobacteria; PFAM: Protein of unknown function DUF721/UPF0232; hypothetical protein 5907 10361805 Psed_0004 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330142.1 5311 D 675635 CDS YP_004330143.1 331693904 10361806 6257..8239 1 NC_015312.1 SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; TIGRFAM: DNA gyrase, subunit B; KEGG: rha:RHA1_ro03674 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA gyrase subunit B 8239 10361806 Psed_0005 Pseudonocardia dioxanivorans CB1190 DNA gyrase subunit B YP_004330143.1 6257 D 675635 CDS YP_004330144.1 331693905 10361807 8283..10802 1 NC_015312.1 SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: sen:SACE_0009 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA gyrase subunit A 10802 10361807 Psed_0006 Pseudonocardia dioxanivorans CB1190 DNA gyrase subunit A YP_004330144.1 8283 D 675635 CDS YP_004330145.1 331693906 10361808 10861..11964 1 NC_015312.1 KEGG: ami:Amir_0008 hypothetical protein; hypothetical protein 11964 10361808 Psed_0007 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330145.1 10861 D 675635 CDS YP_004330146.1 331693907 10361810 12174..12293 1 NC_015312.1 hypothetical protein 12293 10361810 Psed_0008 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330146.1 12174 D 675635 CDS YP_004330147.1 331693908 10361812 12492..13814 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: fri:FraEuI1c_5809 integrase protein; integrase protein 13814 10361812 Psed_0009 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004330147.1 12492 D 675635 CDS YP_004330148.1 331693909 10361813 14562..14732 1 NC_015312.1 hypothetical protein 14732 10361813 Psed_0010 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330148.1 14562 D 675635 CDS YP_004330149.1 331693910 10361814 14977..15759 1 NC_015312.1 KEGG: nar:Saro_3091 hypothetical protein; hypothetical protein 15759 10361814 Psed_0011 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330149.1 14977 D 675635 CDS YP_004330150.1 331693911 10361815 15947..16051 1 NC_015312.1 hypothetical protein 16051 10361815 Psed_0012 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330150.1 15947 D 675635 CDS YP_004330151.1 331693912 10361816 16048..16314 1 NC_015312.1 hypothetical protein 16314 10361816 Psed_0013 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330151.1 16048 D 675635 CDS YP_004330152.1 331693913 10361817 complement(16335..17228) 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 17228 10361817 Psed_0014 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004330152.1 16335 R 675635 CDS YP_004330153.1 331693914 10361819 17717..19462 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: cai:Caci_3873 integrase catalytic region; integrase catalytic subunit 19462 10361819 Psed_0016 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004330153.1 17717 D 675635 CDS YP_004330154.1 331693915 10361820 19459..20271 1 NC_015312.1 KEGG: cai:Caci_3872 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 20271 10361820 Psed_0017 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004330154.1 19459 D 675635 CDS YP_004330155.1 331693916 10361821 20268..21545 1 NC_015312.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 21545 10361821 Psed_0018 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004330155.1 20268 D 675635 CDS YP_004330156.1 331693917 10361823 complement(22458..22712) 1 NC_015312.1 hypothetical protein 22712 10361823 Psed_0020 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330156.1 22458 R 675635 CDS YP_004330157.1 331693918 10361824 complement(22895..23455) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: saq:Sare_1936 isochorismatase hydrolase; isochorismatase hydrolase 23455 10361824 Psed_0021 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004330157.1 22895 R 675635 CDS YP_004330158.1 331693919 10361825 complement(23458..24651) 1 NC_015312.1 KEGG: saq:Sare_1935 hypothetical protein; hypothetical protein 24651 10361825 Psed_0022 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330158.1 23458 R 675635 CDS YP_004330159.1 331693920 10361826 complement(24733..25074) 1 NC_015312.1 KEGG: kfl:Kfla_2179 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 25074 10361826 Psed_0023 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004330159.1 24733 R 675635 CDS YP_004330160.1 331693921 10361827 25222..25554 1 NC_015312.1 TIGRFAM: Excisionase/Xis, DNA-binding; excisionase 25554 10361827 Psed_0024 Pseudonocardia dioxanivorans CB1190 excisionase YP_004330160.1 25222 D 675635 CDS YP_004330161.1 331693922 10361828 25503..25784 1 NC_015312.1 hypothetical protein 25784 10361828 Psed_0025 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330161.1 25503 D 675635 CDS YP_004330162.1 331693923 10361830 complement(26618..27409) 1 NC_015312.1 KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 27409 10361830 Psed_0027 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004330162.1 26618 R 675635 CDS YP_004330163.1 331693924 10361831 complement(27406..28992) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 28992 10361831 Psed_0028 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004330163.1 27406 R 675635 CDS YP_004330164.1 331693925 10361832 29105..29545 1 NC_015312.1 hypothetical protein 29545 10361832 Psed_0029 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330164.1 29105 D 675635 CDS YP_004330165.1 331693926 10361833 29542..29904 1 NC_015312.1 hypothetical protein 29904 10361833 Psed_0030 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330165.1 29542 D 675635 CDS YP_004330166.1 331693927 10361834 29901..31760 1 NC_015312.1 KEGG: kfl:Kfla_2184 type IV secretory pathway VirD4 protein-like protein; type IV secretory pathway VirD4 protein-like protein 31760 10361834 Psed_0031 Pseudonocardia dioxanivorans CB1190 type IV secretory pathway VirD4 protein-like protein YP_004330166.1 29901 D 675635 CDS YP_004330167.1 331693928 10361835 31852..32511 1 NC_015312.1 KEGG: kfl:Kfla_2188 hypothetical protein; hypothetical protein 32511 10361835 Psed_0032 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330167.1 31852 D 675635 CDS YP_004330168.1 331693929 10361836 32508..32909 1 NC_015312.1 hypothetical protein 32909 10361836 Psed_0033 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330168.1 32508 D 675635 CDS YP_004330169.1 331693930 10361837 32906..33823 1 NC_015312.1 KEGG: mlu:Mlut_00270 hypothetical protein; hypothetical protein 33823 10361837 Psed_0034 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330169.1 32906 D 675635 CDS YP_004330170.1 331693931 10361838 34056..38453 1 NC_015312.1 PFAM: TrwC relaxase; KEGG: kfl:Kfla_2190 TrwC relaxase; TrwC relaxase 38453 10361838 Psed_0035 Pseudonocardia dioxanivorans CB1190 TrwC relaxase YP_004330170.1 34056 D 675635 CDS YP_004330171.1 331693932 10361839 38992..40461 1 NC_015312.1 KEGG: stp:Strop_4139 RNA-directed DNA polymerase; PFAM: Reverse transcriptase; Group II intron, maturase-specific; RNA-directed DNA polymerase 40461 10361839 Psed_0036 Pseudonocardia dioxanivorans CB1190 RNA-directed DNA polymerase YP_004330171.1 38992 D 675635 CDS YP_004330172.1 331693933 10361840 40461..40649 1 NC_015312.1 hypothetical protein 40649 10361840 Psed_0037 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330172.1 40461 D 675635 CDS YP_004330173.1 331693934 10361841 complement(41442..41780) 1 NC_015312.1 KEGG: stp:Strop_2011 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 41780 10361841 Psed_0038 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004330173.1 41442 R 675635 CDS YP_004330174.1 331693935 10361842 41885..43894 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; KEGG: ami:Amir_4284 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 43894 10361842 Psed_0039 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004330174.1 41885 D 675635 CDS YP_004330175.1 331693936 10361843 44373..45707 1 NC_015312.1 KEGG: ttr:Tter_2338 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; MgtE integral membrane protein 45707 10361843 Psed_0040 Pseudonocardia dioxanivorans CB1190 MgtE integral membrane protein YP_004330175.1 44373 D 675635 CDS YP_004330176.1 331693937 10361844 45778..47082 1 NC_015312.1 PFAM: Natural resistance-associated macrophage protein; KEGG: ttr:Tter_2339 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 47082 10361844 Psed_0041 Pseudonocardia dioxanivorans CB1190 natural resistance-associated macrophage protein YP_004330176.1 45778 D 675635 CDS YP_004330177.1 331693938 10361845 complement(47852..48400) 1 NC_015312.1 KEGG: mgi:Mflv_1496 hypothetical protein; hypothetical protein 48400 10361845 Psed_0042 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330177.1 47852 R 675635 CDS YP_004330178.1 331693939 10361846 49081..50421 1 NC_015312.1 KEGG: amd:AMED_8638 UDP-N-acetylmuramyl tripeptide synthase; manually curated; PFAM: Domain of unknown function DUF1727; Mur ligase, central; hypothetical protein 50421 10361846 Psed_0043 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330178.1 49081 D 675635 CDS YP_004330179.1 331693940 10361847 50451..51206 1 NC_015312.1 PFAM: CobB/CobQ-like glutamine amidotransferase; KEGG: tpr:Tpau_4003 CobB/CobQ domain protein glutamine amidotransferase; CobB/CobQ domain-containing protein glutamine amidotransferase 51206 10361847 Psed_0044 Pseudonocardia dioxanivorans CB1190 CobB/CobQ domain-containing protein glutamine amidotransferase YP_004330179.1 50451 D 675635 CDS YP_004330180.1 331693941 10361848 complement(51369..51908) 1 NC_015312.1 hypothetical protein 51908 10361848 Psed_0045 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330180.1 51369 R 675635 CDS YP_004330181.1 331693942 10361849 52457..52735 1 NC_015312.1 KEGG: rop:ROP_41980 hypothetical membrane protein; hypothetical protein 52735 10361849 Psed_0046 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330181.1 52457 D 675635 CDS YP_004330182.1 331693943 10361851 53643..54872 1 NC_015312.1 KEGG: gob:Gobs_3530 transposase; transposase 54872 10361851 Psed_0048 Pseudonocardia dioxanivorans CB1190 transposase YP_004330182.1 53643 D 675635 CDS YP_004330183.1 331693944 10361852 55050..56279 1 NC_015312.1 KEGG: gob:Gobs_3530 transposase; transposase 56279 10361852 Psed_0049 Pseudonocardia dioxanivorans CB1190 transposase YP_004330183.1 55050 D 675635 CDS YP_004330184.1 331693945 10361853 56460..57737 1 NC_015312.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 57737 10361853 Psed_0050 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004330184.1 56460 D 675635 CDS YP_004330185.1 331693946 10361854 complement(57937..59517) 1 NC_015312.1 KEGG: amd:AMED_7688 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 59517 10361854 Psed_0051 Pseudonocardia dioxanivorans CB1190 cell envelope-related transcriptional attenuator YP_004330185.1 57937 R 675635 CDS YP_004330186.1 331693947 10361855 complement(59565..59984) 1 NC_015312.1 KEGG: ami:Amir_0798 sec-independent translocase; manually curated; TIGRFAM: Twin-arginine translocation protein TatB; twin-arginine translocation protein subunit TatB 59984 10361855 Psed_0052 Pseudonocardia dioxanivorans CB1190 twin-arginine translocation protein subunit TatB YP_004330186.1 59565 R 675635 CDS YP_004330187.1 331693948 10361857 complement(60331..61167) 1 NC_015312.1 KEGG: fra:Francci3_2368 zinc/iron permease; zinc/iron permease 61167 10361857 Psed_0054 Pseudonocardia dioxanivorans CB1190 zinc/iron permease YP_004330187.1 60331 R 675635 CDS YP_004330188.1 331693949 10361858 61752..65753 1 NC_015312.1 SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Non-ribosomal peptide synthetase C-terminal; Amino acid adenylation; KEGG: req:REQ_05560 non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Bacterial transferase hexapeptide repeat; non-ribosomal peptide synthetase domain-containing protein 65753 10361858 Psed_0055 Pseudonocardia dioxanivorans CB1190 non-ribosomal peptide synthetase domain-containing protein YP_004330188.1 61752 D 675635 CDS YP_004330189.1 331693950 10361859 65863..67650 1 NC_015312.1 KEGG: rha:RHA1_ro01089 cell division protein, FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 67650 10361859 Psed_0056 Pseudonocardia dioxanivorans CB1190 cell division protein FtsW YP_004330189.1 65863 D 675635 CDS YP_004330190.1 331693951 10361860 complement(67660..68691) 1 NC_015312.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: amd:AMED_1208 hypothetical protein; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein 68691 10361860 Psed_0057 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase caa3-type, assembly factor CtaG-like protein YP_004330190.1 67660 R 675635 CDS YP_004330191.1 331693952 10361861 68882..69658 1 NC_015312.1 KEGG: nml:Namu_2480 hypothetical protein; hypothetical protein 69658 10361861 Psed_0058 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330191.1 68882 D 675635 CDS YP_004330192.1 331693953 10361862 69730..70041 1 NC_015312.1 KEGG: nml:Namu_2159 twin-arginine translocation protein, TatB subunit; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; twin-arginine translocation protein subunit TatB 70041 10361862 Psed_0059 Pseudonocardia dioxanivorans CB1190 twin-arginine translocation protein subunit TatB YP_004330192.1 69730 D 675635 CDS YP_004330193.1 331693954 10361864 complement(70695..71879) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit 71879 10361864 Psed_0061 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004330193.1 70695 R 675635 CDS YP_004330194.1 331693955 10361865 72240..73442 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: fri:FraEuI1c_1501 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 73442 10361865 Psed_0062 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004330194.1 72240 D 675635 CDS YP_004330195.1 331693956 10361867 complement(75439..77016) 1 NC_015312.1 KEGG: sro:Sros_2709 membrane protein-like protein; hypothetical protein 77016 10361867 Psed_0064 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330195.1 75439 R 675635 CDS YP_004330196.1 331693957 10361868 77188..78543 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: sgr:SGR_4241 FAD-dependent oxygenase; FAD linked oxidase domain-containing protein 78543 10361868 Psed_0065 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004330196.1 77188 D 675635 CDS YP_004330197.1 331693958 10361869 78637..81444 1 NC_015312.1 KEGG: nml:Namu_4693 winged helix family transcriptional regulator; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; NB-ARC; SMART: Signal transduction response regulator, C-terminal; ATPase, AAA+ type, core; winged helix family transcriptional regulator 81444 10361869 Psed_0066 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004330197.1 78637 D 675635 CDS YP_004330198.1 331693959 10361870 81555..82061 1 NC_015312.1 PFAM: Uncharacterised conserved protein UCP014873, membrane associated; KEGG: nfa:nfa32860 hypothetical protein; hypothetical protein 82061 10361870 Psed_0067 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330198.1 81555 D 675635 CDS YP_004330199.1 331693960 10361871 82058..83578 1 NC_015312.1 KEGG: mex:Mext_3068 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 83578 10361871 Psed_0068 Pseudonocardia dioxanivorans CB1190 pentachlorophenol monooxygenase YP_004330199.1 82058 D 675635 CDS YP_004330200.1 331693961 10361872 83739..84473 1 NC_015312.1 KEGG: amd:AMED_3321 ArsR family transcriptional regulator; PFAM: Protein-tyrosine phosphatase, low molecular weight; HTH transcriptional regulator, ArsR; SMART: Protein-tyrosine phosphatase, low molecular weight; HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 84473 10361872 Psed_0069 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004330200.1 83739 D 675635 CDS YP_004330201.1 331693962 10361873 84470..84844 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amd:AMED_3320 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 84844 10361873 Psed_0070 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004330201.1 84470 D 675635 CDS YP_004330202.1 331693963 10361874 complement(85198..86553) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro10195 4-hydroxybenzoate transporter; major facilitator superfamily protein 86553 10361874 Psed_0071 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330202.1 85198 R 675635 CDS YP_004330203.1 331693964 10361875 complement(86550..87254) 1 NC_015312.1 KEGG: rha:RHA1_ro07102 hypothetical protein; hypothetical protein 87254 10361875 Psed_0072 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330203.1 86550 R 675635 CDS YP_004330204.1 331693965 10361876 complement(87341..88348) 1 NC_015312.1 KEGG: rha:RHA1_ro10196 ferredoxin--NAD(+) reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin; ferredoxin--NAD(+) reductase 88348 10361876 Psed_0073 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004330204.1 87341 R 675635 CDS YP_004330205.1 331693966 10361877 complement(88345..89307) 1 NC_015312.1 KEGG: rha:RHA1_ro10197 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 89307 10361877 Psed_0074 Pseudonocardia dioxanivorans CB1190 4-hydroxythreonine-4-phosphate dehydrogenase YP_004330205.1 88345 R 675635 CDS YP_004330206.1 331693967 10361878 complement(89304..89768) 1 NC_015312.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: rha:RHA1_ro10198 aromatic ring dioxygenase beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 89768 10361878 Psed_0075 Pseudonocardia dioxanivorans CB1190 aromatic-ring-hydroxylating dioxygenase subunit beta YP_004330206.1 89304 R 675635 CDS YP_004330207.1 331693968 10361880 91241..91993 1 NC_015312.1 TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: rha:RHA1_ro10200 IclR family transcriptional regulator; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 91993 10361880 Psed_0077 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004330207.1 91241 D 675635 CDS YP_004330208.1 331693969 10361881 complement(92079..92834) 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: nfa:nfa21360 hypothetical protein; type 12 methyltransferase 92834 10361881 Psed_0078 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004330208.1 92079 R 675635 CDS YP_004330209.1 331693970 10361882 92939..94462 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sen:SACE_6324 peptide ABC transporter peptide-binding protein; ABC transporter substrate-binding protein 94462 10361882 Psed_0079 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004330209.1 92939 D 675635 CDS YP_004330210.1 331693971 10361883 94459..95400 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_5744 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 95400 10361883 Psed_0080 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004330210.1 94459 D 675635 CDS YP_004330211.1 331693972 10361884 95397..96257 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_81881 transporter integral membrane protein; ABC transporter permease 96257 10361884 Psed_0081 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004330211.1 95397 D 675635 CDS YP_004330212.1 331693973 10361885 96254..97690 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sro:Sros_5586 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 97690 10361885 Psed_0082 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004330212.1 96254 D 675635 CDS YP_004330213.1 331693974 10361886 complement(97738..98370) 1 NC_015312.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sro:Sros_0182 amino acid transporter LysE; lysine exporter protein LysE/YggA 98370 10361886 Psed_0083 Pseudonocardia dioxanivorans CB1190 lysine exporter protein LysE/YggA YP_004330213.1 97738 R 675635 CDS YP_004330214.1 331693975 10361887 98478..98930 1 NC_015312.1 KEGG: sco:SCO3361 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 98930 10361887 Psed_0084 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004330214.1 98478 D 675635 CDS YP_004330215.1 331693976 10361888 complement(98980..99987) 1 NC_015312.1 KEGG: amd:AMED_4131 chemotaxis-specific methylesterase CheB; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; chemotaxis protein CheB 99987 10361888 Psed_0085 Pseudonocardia dioxanivorans CB1190 chemotaxis protein CheB YP_004330215.1 98980 R 675635 CDS YP_004330216.1 331693977 10361889 100481..101236 1 NC_015312.1 KEGG: bcv:Bcav_1669 ANTAR domain protein with unknown sensor; PFAM: ANTAR; GAF; SMART: GAF; ANTAR domain-containing protein 101236 10361889 Psed_0086 Pseudonocardia dioxanivorans CB1190 ANTAR domain-containing protein YP_004330216.1 100481 D 675635 CDS YP_004330217.1 331693978 10361890 101380..102042 1 NC_015312.1 KEGG: tpr:Tpau_3922 hypothetical protein; hypothetical protein 102042 10361890 Psed_0087 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330217.1 101380 D 675635 CDS YP_004330218.1 331693979 10361891 102303..102653 1 NC_015312.1 PFAM: Protein of unknown function DUF485; KEGG: xce:Xcel_1074 protein of unknown function DUF485; hypothetical protein 102653 10361891 Psed_0088 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330218.1 102303 D 675635 CDS YP_004330219.1 331693980 10361892 102650..104287 1 NC_015312.1 KEGG: amd:AMED_1584 solute:Na+ symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter; SSS sodium solute transporter superfamily protein 104287 10361892 Psed_0089 Pseudonocardia dioxanivorans CB1190 SSS sodium solute transporter superfamily protein YP_004330219.1 102650 D 675635 CDS YP_004330220.1 331693981 10361893 104353..105021 1 NC_015312.1 KEGG: sco:SCO0406 hypothetical protein; hypothetical protein 105021 10361893 Psed_0090 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330220.1 104353 D 675635 CDS YP_004330221.1 331693982 10361894 105008..106012 1 NC_015312.1 KEGG: sro:Sros_4910 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; PBS lyase HEAT-like repeat; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 106012 10361894 Psed_0091 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004330221.1 105008 D 675635 CDS YP_004330222.1 331693983 10361895 106278..107246 1 NC_015312.1 KEGG: rha:RHA1_ro05161 hypothetical protein; hypothetical protein 107246 10361895 Psed_0092 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330222.1 106278 D 675635 CDS YP_004330223.1 331693984 10361896 107277..107624 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mil:ML5_1284 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 107624 10361896 Psed_0093 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004330223.1 107277 D 675635 CDS YP_004330224.1 331693985 10361897 107742..108164 1 NC_015312.1 PFAM: YCII-related; KEGG: nfa:nfa38190 hypothetical protein; hypothetical protein 108164 10361897 Psed_0094 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330224.1 107742 D 675635 CDS YP_004330225.1 331693986 10361898 108168..109448 1 NC_015312.1 KEGG: nda:Ndas_2135 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 109448 10361898 Psed_0095 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330225.1 108168 D 675635 CDS YP_004330226.1 331693987 10361899 109564..110244 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0126; KEGG: bcm:Bcenmc03_5111 hypothetical protein; hypothetical protein 110244 10361899 Psed_0096 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330226.1 109564 D 675635 CDS YP_004330227.1 331693988 10361900 complement(110267..110812) 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: gob:Gobs_3191 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 110812 10361900 Psed_0097 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004330227.1 110267 R 675635 CDS YP_004330228.1 331693989 10361901 complement(110936..111685) 1 NC_015312.1 KEGG: sro:Sros_6337 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 111685 10361901 Psed_0098 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004330228.1 110936 R 675635 CDS YP_004330229.1 331693990 10361902 111751..112362 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: nca:Noca_4064 dehydratase; acyl dehydratase MaoC 112362 10361902 Psed_0099 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004330229.1 111751 D 675635 CDS YP_004330230.1 331693991 10361903 112503..113594 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: rxy:Rxyl_2379 zinc-binding alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; L-iditol 2-dehydrogenase 113594 10361903 Psed_0100 Pseudonocardia dioxanivorans CB1190 L-iditol 2-dehydrogenase YP_004330230.1 112503 D 675635 CDS YP_004330231.1 331693992 10361904 113591..115027 1 NC_015312.1 PFAM: MmgE/PrpD; KEGG: bur:Bcep18194_B1168 MmgE/PrpD family protein; MmgE/PrpD family protein 115027 10361904 Psed_0101 Pseudonocardia dioxanivorans CB1190 MmgE/PrpD family protein YP_004330231.1 113591 D 675635 CDS YP_004330232.1 331693993 10361905 complement(114981..115199) 1 NC_015312.1 KEGG: ace:Acel_0074 hypothetical protein; hypothetical protein 115199 10361905 Psed_0102 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330232.1 114981 R 675635 CDS YP_004330233.1 331693994 10361906 complement(115262..115918) 1 NC_015312.1 PFAM: MT-A70; KEGG: ace:Acel_2063 MT-A70 family protein; MT-A70 family protein 115918 10361906 Psed_0103 Pseudonocardia dioxanivorans CB1190 MT-A70 family protein YP_004330233.1 115262 R 675635 CDS YP_004330234.1 331693995 10361907 complement(115915..116931) 1 NC_015312.1 KEGG: sen:SACE_7244 DeoR family transcriptional regulator; DeoR family transcriptional regulator 116931 10361907 Psed_0104 Pseudonocardia dioxanivorans CB1190 DeoR family transcriptional regulator YP_004330234.1 115915 R 675635 CDS YP_004330235.1 331693996 10361908 116982..118337 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; KEGG: sen:SACE_7243 FAD-dependent oxygenase; FAD linked oxidase domain-containing protein 118337 10361908 Psed_0105 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004330235.1 116982 D 675635 CDS YP_004330236.1 331693997 10361909 complement(118734..119306) 1 NC_015312.1 KEGG: cur:cur_1817 Fe-S oxidoreductase; Fe-S oxidoreductase 119306 10361909 Psed_0106 Pseudonocardia dioxanivorans CB1190 Fe-S oxidoreductase YP_004330236.1 118734 R 675635 CDS YP_004330237.1 331693998 10361910 119547..120647 1 NC_015312.1 KEGG: ami:Amir_0659 dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein; dipeptidylaminopeptidase/acylaminoacyl- peptidase-like protein 120647 10361910 Psed_0107 Pseudonocardia dioxanivorans CB1190 dipeptidylaminopeptidase/acylaminoacyl- peptidase-like protein YP_004330237.1 119547 D 675635 CDS YP_004330238.1 331693999 10361911 complement(120927..121361) 1 NC_015312.1 hypothetical protein 121361 10361911 Psed_0108 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330238.1 120927 R 675635 CDS YP_004330239.1 331694000 10361912 121410..121952 1 NC_015312.1 KEGG: gbr:Gbro_0020 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; peptidyl-prolyl isomerase 121952 10361912 Psed_0109 Pseudonocardia dioxanivorans CB1190 peptidyl-prolyl isomerase YP_004330239.1 121410 D 675635 CDS YP_004330240.1 331694001 10361913 121966..122820 1 NC_015312.1 PFAM: Peptidase S54, rhomboid domain; KEGG: req:REQ_00180 serine peptidase; peptidase S54, rhomboid domain-containing protein 122820 10361913 Psed_0110 Pseudonocardia dioxanivorans CB1190 peptidase S54, rhomboid domain-containing protein YP_004330240.1 121966 D 675635 CDS YP_004330241.1 331694002 10361914 complement(122831..123325) 1 NC_015312.1 KEGG: saq:Sare_4994 hypothetical protein; hypothetical protein 123325 10361914 Psed_0111 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330241.1 122831 R 675635 CDS YP_004330242.1 331694003 10361915 complement(123402..123659) 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0233; KEGG: svi:Svir_00290 septation inhibitor protein; hypothetical protein 123659 10361915 Psed_0112 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330242.1 123402 R 675635 CDS YP_004330243.1 331694004 10361916 complement(123780..124421) 1 NC_015312.1 TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: svi:Svir_00350 anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase 124421 10361916 Psed_0113 Pseudonocardia dioxanivorans CB1190 glutamine amidotransferase of anthranilate synthase YP_004330243.1 123780 R 675635 CDS YP_004330244.1 331694005 10361917 complement(124423..126354) 1 NC_015312.1 PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: ami:Amir_0021 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; PASTA; serine/threonine protein kinase with PASTA sensor(s) 126354 10361917 Psed_0114 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase with PASTA sensor(s) YP_004330244.1 124423 R 675635 CDS YP_004330245.1 331694006 10361918 complement(126463..129105) 1 NC_015312.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: ami:Amir_0022 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 129105 10361918 Psed_0115 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004330245.1 126463 R 675635 CDS YP_004330246.1 331694007 10361919 complement(129102..130571) 1 NC_015312.1 KEGG: req:REQ_00250 penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase 130571 10361919 Psed_0116 Pseudonocardia dioxanivorans CB1190 peptidoglycan glycosyltransferase YP_004330246.1 129102 R 675635 CDS YP_004330247.1 331694008 10361920 complement(130568..132031) 1 NC_015312.1 PFAM: Cell cycle protein; KEGG: nfa:nfa830 cell division protein; cell cycle protein 132031 10361920 Psed_0117 Pseudonocardia dioxanivorans CB1190 cell cycle protein YP_004330247.1 130568 R 675635 CDS YP_004330248.1 331694009 10361921 complement(132031..133428) 1 NC_015312.1 PFAM: Protein phosphatase 2C, N-terminal; KEGG: sen:SACE_0048 protein serine/threonine phosphatases; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase 133428 10361921 Psed_0118 Pseudonocardia dioxanivorans CB1190 Ser/Thr phosphatase YP_004330248.1 132031 R 675635 CDS YP_004330249.1 331694010 10361922 complement(133544..134002) 1 NC_015312.1 KEGG: sen:SACE_0049 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; FHA domain-containing protein 134002 10361922 Psed_0119 Pseudonocardia dioxanivorans CB1190 FHA domain-containing protein YP_004330249.1 133544 R 675635 CDS YP_004330250.1 331694011 10361923 complement(134058..135296) 1 NC_015312.1 KEGG: amd:AMED_0057 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; FHA domain-containing protein 135296 10361923 Psed_0120 Pseudonocardia dioxanivorans CB1190 FHA domain-containing protein YP_004330250.1 134058 R 675635 CDS YP_004330251.1 331694012 10361925 complement(135592..136215) 1 NC_015312.1 KEGG: mil:ML5_5510 hypothetical protein; hypothetical protein 136215 10361925 Psed_0121 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330251.1 135592 R 675635 CDS YP_004330252.1 331694013 10361926 complement(136291..136557) 1 NC_015312.1 KEGG: kfl:Kfla_3461 hypothetical protein; hypothetical protein 136557 10361926 Psed_0122 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330252.1 136291 R 675635 CDS YP_004330253.1 331694014 10361927 136648..137220 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: scb:SCAB_90371 hypothetical protein; carboxymuconolactone decarboxylase 137220 10361927 Psed_0123 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004330253.1 136648 D 675635 CDS YP_004330254.1 331694015 10361928 137272..138060 1 NC_015312.1 KEGG: sen:SACE_6393 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 138060 10361928 Psed_0124 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004330254.1 137272 D 675635 CDS YP_004330255.1 331694016 10361929 complement(138087..138983) 1 NC_015312.1 KEGG: svi:Svir_24560 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 138983 10361929 Psed_0125 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004330255.1 138087 R 675635 CDS YP_004330256.1 331694017 10361930 139003..140103 1 NC_015312.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: rxy:Rxyl_1586 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 140103 10361930 Psed_0126 Pseudonocardia dioxanivorans CB1190 vitamin-B12 independent methionine synthase YP_004330256.1 139003 D 675635 CDS YP_004330257.1 331694018 10361932 complement(140871..141554) 1 NC_015312.1 KEGG: gob:Gobs_4382 haloacid dehalogenase I; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase; haloacid dehalogenase 141554 10361932 Psed_0128 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004330257.1 140871 R 675635 CDS YP_004330258.1 331694019 10361933 complement(141678..142391) 1 NC_015312.1 PFAM: Domain of unknown function DUF59; KEGG: gob:Gobs_1749 hypothetical protein; hypothetical protein 142391 10361933 Psed_0129 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330258.1 141678 R 675635 CDS YP_004330259.1 331694020 10361934 complement(142426..143490) 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: amd:AMED_4328 amidohydrolase; amidohydrolase 143490 10361934 Psed_0130 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004330259.1 142426 R 675635 CDS YP_004330260.1 331694021 10361935 complement(143546..144574) 1 NC_015312.1 KEGG: gob:Gobs_1750 alcohol dehydrogenase GroES domain-containing protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES 144574 10361935 Psed_0131 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroES YP_004330260.1 143546 R 675635 CDS YP_004330261.1 331694022 10361936 complement(144817..145242) 1 NC_015312.1 PFAM: Limonene-1,2-epoxide hydrolase; KEGG: cai:Caci_4134 4-oxalocrotonate tautomerase; limonene-12-epoxide hydrolase 145242 10361936 Psed_0132 Pseudonocardia dioxanivorans CB1190 limonene-12-epoxide hydrolase YP_004330261.1 144817 R 675635 CDS YP_004330262.1 331694023 10361937 complement(145358..147172) 1 NC_015312.1 KEGG: sen:SACE_5343 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 147172 10361937 Psed_0133 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004330262.1 145358 R 675635 CDS YP_004330263.1 331694024 10361938 147188..147721 1 NC_015312.1 KEGG: ami:Amir_0304 hypothetical protein; hypothetical protein 147721 10361938 Psed_0134 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330263.1 147188 D 675635 CDS YP_004330264.1 331694025 10361939 147733..148389 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: tfu:Tfu_2676 hypothetical protein; NAD-dependent epimerase/dehydratase 148389 10361939 Psed_0135 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004330264.1 147733 D 675635 CDS YP_004330265.1 331694026 10361940 148386..149798 1 NC_015312.1 KEGG: kra:Krad_4083 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 149798 10361940 Psed_0136 Pseudonocardia dioxanivorans CB1190 dihydrolipoyl dehydrogenase YP_004330265.1 148386 D 675635 CDS YP_004330266.1 331694027 10361941 complement(149819..150799) 1 NC_015312.1 PFAM: Copper resistance D; KEGG: sen:SACE_0677 copper resistance transporter; copper resistance D domain-containing protein 150799 10361941 Psed_0137 Pseudonocardia dioxanivorans CB1190 copper resistance D domain-containing protein YP_004330266.1 149819 R 675635 CDS YP_004330267.1 331694028 10361942 complement(150813..151361) 1 NC_015312.1 PFAM: Copper resistance protein CopC, core; KEGG: sen:SACE_0073 copper resistance protein; copper resistance protein CopC 151361 10361942 Psed_0138 Pseudonocardia dioxanivorans CB1190 copper resistance protein CopC YP_004330267.1 150813 R 675635 CDS YP_004330268.1 331694029 10361943 complement(151358..152134) 1 NC_015312.1 PFAM: GLE1, N-terminal, bacteria; KEGG: sen:SACE_0074 hypothetical protein; nuclear export factor GLE1 152134 10361943 Psed_0139 Pseudonocardia dioxanivorans CB1190 nuclear export factor GLE1 YP_004330268.1 151358 R 675635 CDS YP_004330269.1 331694030 10361944 complement(152202..152702) 1 NC_015312.1 KEGG: amd:AMED_0095 hypothetical protein; hypothetical protein 152702 10361944 Psed_0140 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330269.1 152202 R 675635 CDS YP_004330270.1 331694031 10361945 complement(152885..153592) 1 NC_015312.1 KEGG: rer:RER_01330 hypothetical protein; hypothetical protein 153592 10361945 Psed_0141 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330270.1 152885 R 675635 CDS YP_004330271.1 331694032 10361946 153695..155452 1 NC_015312.1 TIGRFAM: RecB family nuclease, TM0106, KEGG: ami:Amir_0046 nuclease (RecB family)-like protein; RecB family nuclease 155452 10361946 Psed_0142 Pseudonocardia dioxanivorans CB1190 RecB family nuclease YP_004330271.1 153695 D 675635 CDS YP_004330272.1 331694033 10361947 155585..156886 1 NC_015312.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: sen:SACE_5565 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 156886 10361947 Psed_0143 Pseudonocardia dioxanivorans CB1190 nucleotide sugar dehydrogenase YP_004330272.1 155585 D 675635 CDS YP_004330273.1 331694034 10361948 157253..157804 1 NC_015312.1 KEGG: sen:SACE_2073 methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 157804 10361948 Psed_0144 Pseudonocardia dioxanivorans CB1190 methylated-DNA--protein-cysteine methyltransferase YP_004330273.1 157253 D 675635 CDS YP_004330274.1 331694035 10361949 complement(157893..158696) 1 NC_015312.1 KEGG: sen:SACE_7200 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein 158696 10361949 Psed_0145 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330274.1 157893 R 675635 CDS YP_004330275.1 331694036 10361950 complement(158693..161581) 1 NC_015312.1 KEGG: amd:AMED_9128 MFS transporter, multidrug efflux transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; Collagen-binding surface protein Cna-like, B-type domain; EmrB/QacA subfamily drug resistance transporter 161581 10361950 Psed_0146 Pseudonocardia dioxanivorans CB1190 EmrB/QacA subfamily drug resistance transporter YP_004330275.1 158693 R 675635 CDS YP_004330276.1 331694037 10361951 complement(161581..162117) 1 NC_015312.1 KEGG: ami:Amir_0305 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 162117 10361951 Psed_0147 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004330276.1 161581 R 675635 CDS YP_004330277.1 331694038 10361952 162371..162913 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: msm:MSMEG_0644 cupin domain-containing protein; cupin 162913 10361952 Psed_0148 Pseudonocardia dioxanivorans CB1190 cupin YP_004330277.1 162371 D 675635 CDS YP_004330278.1 331694039 10361953 163002..163448 1 NC_015312.1 KEGG: amd:AMED_0129 hypothetical protein; hypothetical protein 163448 10361953 Psed_0149 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330278.1 163002 D 675635 CDS YP_004330279.1 331694040 10361954 163448..164323 1 NC_015312.1 PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: mpa:MAP0889 hypothetical protein; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-formamidopyrimidine glycosylase 164323 10361954 Psed_0150 Pseudonocardia dioxanivorans CB1190 DNA-formamidopyrimidine glycosylase YP_004330279.1 163448 D 675635 CDS YP_004330280.1 331694041 10361955 164334..165542 1 NC_015312.1 KEGG: sen:SACE_0115 sensor kinase, two-component system; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; signal transduction histidine kinase LytS 165542 10361955 Psed_0151 Pseudonocardia dioxanivorans CB1190 signal transduction histidine kinase LytS YP_004330280.1 164334 D 675635 CDS YP_004330281.1 331694042 10361956 165618..166499 1 NC_015312.1 PFAM: Peptidase S49; KEGG: amd:AMED_0132 serine protease; peptidase S49 166499 10361956 Psed_0152 Pseudonocardia dioxanivorans CB1190 peptidase S49 YP_004330281.1 165618 D 675635 CDS YP_004330282.1 331694043 10361957 166668..167534 1 NC_015312.1 KEGG: mil:ML5_6160 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; LytTR family two component transcriptional regulator 167534 10361957 Psed_0153 Pseudonocardia dioxanivorans CB1190 LytTR family two component transcriptional regulator YP_004330282.1 166668 D 675635 CDS YP_004330283.1 331694044 10361958 167641..169197 1 NC_015312.1 KEGG: rha:RHA1_ro05042 hypothetical protein; hypothetical protein 169197 10361958 Psed_0154 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330283.1 167641 D 675635 CDS YP_004330284.1 331694045 10361959 169204..170943 1 NC_015312.1 PFAM: Sodium/solute symporter; KEGG: rop:ROP_51070 SSS family transporter; Na+/solute symporter 170943 10361959 Psed_0155 Pseudonocardia dioxanivorans CB1190 Na+/solute symporter YP_004330284.1 169204 D 675635 CDS YP_004330285.1 331694046 10361960 170940..172682 1 NC_015312.1 PFAM: Sodium/solute symporter; KEGG: rha:RHA1_ro05043 sodium:solute symporter, SSF; Na+/solute symporter 172682 10361960 Psed_0156 Pseudonocardia dioxanivorans CB1190 Na+/solute symporter YP_004330285.1 170940 D 675635 CDS YP_004330286.1 331694047 10361961 172734..173063 1 NC_015312.1 KEGG: nml:Namu_0213 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 173063 10361961 Psed_0157 Pseudonocardia dioxanivorans CB1190 rhodanese-like protein YP_004330286.1 172734 D 675635 CDS YP_004330287.1 331694048 10361962 173294..174355 1 NC_015312.1 KEGG: ami:Amir_0075 hypothetical protein; hypothetical protein 174355 10361962 Psed_0158 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330287.1 173294 D 675635 CDS YP_004330288.1 331694049 10361963 174393..175340 1 NC_015312.1 PFAM: FAD-binding 9, siderophore-interacting; SEC-C motif; KEGG: ami:Amir_0079 sec-C motif domain protein; FAD-binding 9 siderophore-interacting domain-containing protein 175340 10361963 Psed_0159 Pseudonocardia dioxanivorans CB1190 FAD-binding 9 siderophore-interacting domain-containing protein YP_004330288.1 174393 D 675635 CDS YP_004330289.1 331694050 10361964 175420..176355 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tcu:Tcur_0098 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 176355 10361964 Psed_0160 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004330289.1 175420 D 675635 CDS YP_004330290.1 331694051 10361965 complement(176489..177307) 1 NC_015312.1 PFAM: Abortive infection protein; KEGG: sen:SACE_0132 abortive infection protein; abortive infection protein 177307 10361965 Psed_0161 Pseudonocardia dioxanivorans CB1190 abortive infection protein YP_004330290.1 176489 R 675635 CDS YP_004330291.1 331694052 10361966 177366..177809 1 NC_015312.1 KEGG: sen:SACE_6354 hypothetical protein; hypothetical protein 177809 10361966 Psed_0162 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330291.1 177366 D 675635 CDS YP_004330292.1 331694053 10361967 177861..178211 1 NC_015312.1 KEGG: gob:Gobs_3347 hypothetical protein; hypothetical protein 178211 10361967 Psed_0163 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330292.1 177861 D 675635 CDS YP_004330293.1 331694054 10361968 complement(178233..179060) 1 NC_015312.1 KEGG: ami:Amir_0086 hypothetical protein; hypothetical protein 179060 10361968 Psed_0164 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330293.1 178233 R 675635 CDS YP_004330294.1 331694055 10361969 179182..180066 1 NC_015312.1 KEGG: ami:Amir_0089 hypothetical protein; hypothetical protein 180066 10361969 Psed_0165 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330294.1 179182 D 675635 CDS YP_004330295.1 331694056 10361970 180288..181235 1 NC_015312.1 KEGG: gob:Gobs_0268 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Prephenate dehydratase 181235 10361970 Psed_0166 Pseudonocardia dioxanivorans CB1190 Prephenate dehydratase YP_004330295.1 180288 D 675635 CDS YP_004330296.1 331694057 10361971 181232..182026 1 NC_015312.1 KEGG: sen:SACE_0153 2,3-PDG dependent phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 182026 10361971 Psed_0167 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004330296.1 181232 D 675635 CDS YP_004330297.1 331694058 10361972 complement(182051..182401) 1 NC_015312.1 PFAM: Protein of unknown function DUF1025; KEGG: ami:Amir_0112 protein of unknown function DUF1025; hypothetical protein 182401 10361972 Psed_0168 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330297.1 182051 R 675635 CDS YP_004330298.1 331694059 10361973 complement(182415..183638) 1 NC_015312.1 KEGG: sen:SACE_0155 secreted protein; hypothetical protein 183638 10361973 Psed_0169 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330298.1 182415 R 675635 CDS YP_004330299.1 331694060 10361974 183765..184451 1 NC_015312.1 KEGG: ami:Amir_0114 hypothetical protein; hypothetical protein 184451 10361974 Psed_0170 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330299.1 183765 D 675635 CDS YP_004330300.1 331694061 10361975 184452..185618 1 NC_015312.1 KEGG: sen:SACE_0157 hypothetical protein; PFAM: Glutathionylspermidine synthase; Trypanothione synthase 185618 10361975 Psed_0171 Pseudonocardia dioxanivorans CB1190 Trypanothione synthase YP_004330300.1 184452 D 675635 CDS YP_004330301.1 331694062 10361976 185642..186094 1 NC_015312.1 PFAM: Protein of unknown function DUF350; KEGG: ami:Amir_0116 protein of unknown function DUF350; hypothetical protein 186094 10361976 Psed_0172 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330301.1 185642 D 675635 CDS YP_004330302.1 331694063 10361977 186133..186981 1 NC_015312.1 KEGG: msm:MSMEG_6407 Cof-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3; HAD-superfamily hydrolase 186981 10361977 Psed_0173 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004330302.1 186133 D 675635 CDS YP_004330303.1 331694064 10361978 187068..187715 1 NC_015312.1 KEGG: sen:SACE_0167 membrane-associated phospholipid phosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 187715 10361978 Psed_0174 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004330303.1 187068 D 675635 CDS YP_004330304.1 331694065 10361979 187741..188661 1 NC_015312.1 PFAM: UbiA prenyltransferase; KEGG: amd:AMED_0226 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; UbiA prenyltransferase 188661 10361979 Psed_0175 Pseudonocardia dioxanivorans CB1190 UbiA prenyltransferase YP_004330304.1 187741 D 675635 CDS YP_004330305.1 331694066 10361980 188671..189582 1 NC_015312.1 TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: nml:Namu_4180 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 189582 10361980 Psed_0176 Pseudonocardia dioxanivorans CB1190 glucose-1-phosphate thymidylyltransferase YP_004330305.1 188671 D 675635 CDS YP_004330306.1 331694067 10361981 189579..190553 1 NC_015312.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: svi:Svir_06090 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 190553 10361981 Psed_0177 Pseudonocardia dioxanivorans CB1190 dTDP-glucose 4,6-dehydratase YP_004330306.1 189579 D 675635 CDS YP_004330307.1 331694068 10361983 191929..192624 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: rer:RER_02530 hypothetical protein; type 12 methyltransferase 192624 10361983 Psed_0179 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004330307.1 191929 D 675635 CDS YP_004330308.1 331694069 10361984 192621..193391 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: cmi:CMM_2310 glycosyl transferase; family 2 glycosyl transferase 193391 10361984 Psed_0180 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004330308.1 192621 D 675635 CDS YP_004330309.1 331694070 10361985 193391..193804 1 NC_015312.1 KEGG: art:Arth_2682 hypothetical protein; hypothetical protein 193804 10361985 Psed_0181 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330309.1 193391 D 675635 CDS YP_004330310.1 331694071 10361986 complement(193829..194866) 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: ske:Sked_08990 glycosyltransferase; family 2 glycosyl transferase 194866 10361986 Psed_0182 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004330310.1 193829 R 675635 CDS YP_004330311.1 331694072 10361987 complement(194863..196152) 1 NC_015312.1 KEGG: cai:Caci_0997 hypothetical protein; hypothetical protein 196152 10361987 Psed_0183 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330311.1 194863 R 675635 CDS YP_004330312.1 331694073 10361988 complement(196206..198311) 1 NC_015312.1 KEGG: amd:AMED_0223 hypothetical protein; hypothetical protein 198311 10361988 Psed_0184 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330312.1 196206 R 675635 CDS YP_004330313.1 331694074 10361989 198424..199617 1 NC_015312.1 TIGRFAM: UDP-galactopyranose mutase; KEGG: svi:Svir_01310 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase, C-terminal; FAD dependent oxidoreductase; UDP-galactopyranose mutase 199617 10361989 Psed_0185 Pseudonocardia dioxanivorans CB1190 UDP-galactopyranose mutase YP_004330313.1 198424 D 675635 CDS YP_004330314.1 331694075 10361990 199766..201487 1 NC_015312.1 KEGG: svi:Svir_28170 hypothetical protein; hypothetical protein 201487 10361990 Psed_0186 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330314.1 199766 D 675635 CDS YP_004330315.1 331694076 10361991 201621..203609 1 NC_015312.1 KEGG: sen:SACE_5734 galactofuranosyl transferase; galactofuranosyl transferase 203609 10361991 Psed_0187 Pseudonocardia dioxanivorans CB1190 galactofuranosyl transferase YP_004330315.1 201621 D 675635 CDS YP_004330316.1 331694077 10361992 complement(203688..205625) 1 NC_015312.1 KEGG: svi:Svir_01420 predicted glycosyltransferase; glycosyltransferase 205625 10361992 Psed_0188 Pseudonocardia dioxanivorans CB1190 glycosyltransferase YP_004330316.1 203688 R 675635 CDS YP_004330317.1 331694078 10361993 complement(205823..208810) 1 NC_015312.1 PFAM: Mycobacterial cell wall arabinan synthesis protein; KEGG: sen:SACE_5736 arabinosyl transferase; cell wall arabinan synthesis protein 208810 10361993 Psed_0189 Pseudonocardia dioxanivorans CB1190 cell wall arabinan synthesis protein YP_004330317.1 205823 R 675635 CDS YP_004330318.1 331694079 10361994 209040..210443 1 NC_015312.1 PFAM: Acyltransferase 3; KEGG: gob:Gobs_4357 acyltransferase 3; acyltransferase 210443 10361994 Psed_0190 Pseudonocardia dioxanivorans CB1190 acyltransferase YP_004330318.1 209040 D 675635 CDS YP_004330319.1 331694080 10361995 210495..211154 1 NC_015312.1 hypothetical protein 211154 10361995 Psed_0191 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330319.1 210495 D 675635 CDS YP_004330320.1 331694081 10361996 211154..211819 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: gbr:Gbro_1352 nitroreductase; nitroreductase 211819 10361996 Psed_0192 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004330320.1 211154 D 675635 CDS YP_004330321.1 331694082 10361997 211939..213945 1 NC_015312.1 KEGG: art:Arth_2686 hypothetical protein; hypothetical protein 213945 10361997 Psed_0193 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330321.1 211939 D 675635 CDS YP_004330322.1 331694083 10361998 complement(213986..214741) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_0229 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 214741 10361998 Psed_0194 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004330322.1 213986 R 675635 CDS YP_004330323.1 331694084 10361999 complement(214745..216118) 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; D-arabinono-1,4-lactone oxidase; KEGG: sen:SACE_0195 FAD linked oxidoreductase; FAD linked oxidase domain-containing protein 216118 10361999 Psed_0195 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004330323.1 214745 R 675635 CDS YP_004330324.1 331694085 10362000 216293..218053 1 NC_015312.1 KEGG: fra:Francci3_0362 hypothetical protein; hypothetical protein 218053 10362000 Psed_0196 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330324.1 216293 D 675635 CDS YP_004330325.1 331694086 10362001 218086..218697 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: sro:Sros_0038 hypothetical protein; hypothetical protein 218697 10362001 Psed_0197 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330325.1 218086 D 675635 CDS YP_004330326.1 331694087 10362002 complement(218725..219474) 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: ske:Sked_36170 multidrug ABC transporter permease; ABC transporter 219474 10362002 Psed_0198 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330326.1 218725 R 675635 CDS YP_004330327.1 331694088 10362003 complement(219471..220394) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: mil:ML5_0344 abc transporter related protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 220394 10362003 Psed_0199 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004330327.1 219471 R 675635 CDS YP_004330328.1 331694089 10362004 complement(220391..220750) 1 NC_015312.1 KEGG: amd:AMED_1510 MarR family transcriptional regulator; MarR family transcriptional regulator 220750 10362004 Psed_0200 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004330328.1 220391 R 675635 CDS YP_004330329.1 331694090 10362005 complement(220747..221394) 1 NC_015312.1 KEGG: bcv:Bcav_4027 hypothetical protein; hypothetical protein 221394 10362005 Psed_0201 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330329.1 220747 R 675635 CDS YP_004330330.1 331694091 10362006 221619..224291 1 NC_015312.1 KEGG: gob:Gobs_1678 ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 224291 10362006 Psed_0202 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004330330.1 221619 D 675635 CDS YP_004330331.1 331694092 10362007 224497..224718 1 NC_015312.1 KEGG: gob:Gobs_1989 hypothetical protein; hypothetical protein 224718 10362007 Psed_0203 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330331.1 224497 D 675635 CDS YP_004330332.1 331694093 10362008 224740..225459 1 NC_015312.1 KEGG: gob:Gobs_1683 hypothetical protein; hypothetical protein 225459 10362008 Psed_0204 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330332.1 224740 D 675635 CDS YP_004330333.1 331694094 10362009 225608..226048 1 NC_015312.1 PFAM: GtrA-like protein; KEGG: svi:Svir_01410 predicted membrane protein; GtrA family protein 226048 10362009 Psed_0205 Pseudonocardia dioxanivorans CB1190 GtrA family protein YP_004330333.1 225608 D 675635 CDS YP_004330334.1 331694095 10362010 complement(226056..226970) 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: amd:AMED_0238 glycosyltransferase; family 2 glycosyl transferase 226970 10362010 Psed_0206 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004330334.1 226056 R 675635 CDS YP_004330335.1 331694096 10362011 complement(226967..227737) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sen:SACE_0200 ABC transport system, ATP-binding protein; SMART: ATPase, AAA+ type, core; teichoic-acid-transporting AtPase 227737 10362011 Psed_0207 Pseudonocardia dioxanivorans CB1190 teichoic-acid-transporting AtPase YP_004330335.1 226967 R 675635 CDS YP_004330336.1 331694097 10362012 complement(227742..228557) 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: gob:Gobs_4323 ABC-2 type transporter; ABC transporter 228557 10362012 Psed_0208 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330336.1 227742 R 675635 CDS YP_004330337.1 331694098 10362013 complement(228750..229304) 1 NC_015312.1 PFAM: Protein of unknown function DUF2587; KEGG: ami:Amir_0135 hypothetical protein; hypothetical protein 229304 10362013 Psed_0209 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330337.1 228750 R 675635 CDS YP_004330338.1 331694099 10362014 complement(229354..230373) 1 NC_015312.1 SMART: Polyketide synthase, enoylreductase; TIGRFAM: Quinone oxidoreductase , PIG3; KEGG: rop:ROP_39810 oxidoreductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; NAD(P)H quinone oxidoreductase 230373 10362014 Psed_0210 Pseudonocardia dioxanivorans CB1190 NAD(P)H quinone oxidoreductase YP_004330338.1 229354 R 675635 CDS YP_004330339.1 331694100 10362015 230383..231030 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ami:Amir_0140 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 231030 10362015 Psed_0211 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004330339.1 230383 D 675635 CDS YP_004330340.1 331694101 10362016 complement(231040..231999) 1 NC_015312.1 PFAM: Uncharacterised protein family, zinc metallopeptidase KEGG: amd:AMED_0245 metallopeptidase; hypothetical protein 231999 10362016 Psed_0212 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330340.1 231040 R 675635 CDS YP_004330341.1 331694102 10362017 232096..232584 1 NC_015312.1 KEGG: ami:Amir_0144 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 232584 10362017 Psed_0213 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004330341.1 232096 D 675635 CDS YP_004330342.1 331694103 10362019 complement(232685..233575) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fri:FraEuI1c_5356 alpha/beta hydrolase fold protein; alpha/beta hydrolase 233575 10362019 Psed_0214 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004330342.1 232685 R 675635 CDS YP_004330343.1 331694104 10362020 complement(233569..234120) 1 NC_015312.1 KEGG: azl:AZL_012780 flavin reductase; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 234120 10362020 Psed_0215 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004330343.1 233569 R 675635 CDS YP_004330344.1 331694105 10362021 complement(234117..235598) 1 NC_015312.1 TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; KEGG: gtn:GTNG_3160 aromatic compound hydroxylase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit 235598 10362021 Psed_0216 Pseudonocardia dioxanivorans CB1190 4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit YP_004330344.1 234117 R 675635 CDS YP_004330345.1 331694106 10362022 complement(235595..236563) 1 NC_015312.1 KEGG: amd:AMED_5706 2,3-dihydroxyphenylpropionate 1,2-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; 3-carboxyethylcatechol 2,3-dioxygenase 236563 10362022 Psed_0217 Pseudonocardia dioxanivorans CB1190 3-carboxyethylcatechol 2,3-dioxygenase YP_004330345.1 235595 R 675635 CDS YP_004330346.1 331694107 10362023 complement(236592..237125) 1 NC_015312.1 KEGG: swi:Swit_1555 hypothetical protein; hypothetical protein 237125 10362023 Psed_0218 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330346.1 236592 R 675635 CDS YP_004330347.1 331694108 10362024 complement(237283..238017) 1 NC_015312.1 KEGG: cai:Caci_6492 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 238017 10362024 Psed_0219 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004330347.1 237283 R 675635 CDS YP_004330348.1 331694109 10362025 complement(238014..239216) 1 NC_015312.1 KEGG: sco:SCO3636 cytochrome P-450 hydroxylase; PFAM: Cytochrome P450; peroxidase 239216 10362025 Psed_0220 Pseudonocardia dioxanivorans CB1190 peroxidase YP_004330348.1 238014 R 675635 CDS YP_004330349.1 331694110 10362026 239347..241119 1 NC_015312.1 KEGG: nml:Namu_4896 transcriptional regulator CdaR; transcriptional regulator CdaR 241119 10362026 Psed_0221 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004330349.1 239347 D 675635 CDS YP_004330350.1 331694111 10362027 complement(241130..241690) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fri:FraEuI1c_3930 regulatory protein TetR; TetR family transcriptional regulator 241690 10362027 Psed_0222 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330350.1 241130 R 675635 CDS YP_004330351.1 331694112 10362028 241790..242686 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fri:FraEuI1c_3929 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 242686 10362028 Psed_0223 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004330351.1 241790 D 675635 CDS YP_004330352.1 331694113 10362029 complement(242668..243063) 1 NC_015312.1 KEGG: sna:Snas_2024 hypothetical protein; hypothetical protein 243063 10362029 Psed_0224 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330352.1 242668 R 675635 CDS YP_004330353.1 331694114 10362030 complement(243073..243777) 1 NC_015312.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: sen:SACE_2030 peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 243777 10362030 Psed_0225 Pseudonocardia dioxanivorans CB1190 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004330353.1 243073 R 675635 CDS YP_004330354.1 331694115 10362031 243855..244469 1 NC_015312.1 KEGG: gob:Gobs_1121 hypothetical protein; hypothetical protein 244469 10362031 Psed_0226 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330354.1 243855 D 675635 CDS YP_004330355.1 331694116 10362032 complement(244384..244989) 1 NC_015312.1 KEGG: rop:ROP_51490 hypothetical protein; hypothetical protein 244989 10362032 Psed_0227 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330355.1 244384 R 675635 CDS YP_004330356.1 331694117 10362033 complement(245104..245550) 1 NC_015312.1 PFAM: Protein of unknown function DUF1905; KEGG: rha:RHA1_ro06736 hypothetical protein; hypothetical protein 245550 10362033 Psed_0228 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330356.1 245104 R 675635 CDS YP_004330357.1 331694118 10362034 complement(245776..247029) 1 NC_015312.1 KEGG: sgr:SGR_3783 aminopeptidase 2; PFAM: Peptidase M18; aspartyl aminopeptidase 247029 10362034 Psed_0229 Pseudonocardia dioxanivorans CB1190 aspartyl aminopeptidase YP_004330357.1 245776 R 675635 CDS YP_004330358.1 331694119 10362035 247030..248481 1 NC_015312.1 KEGG: gob:Gobs_4747 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; choline dehydrogenase 248481 10362035 Psed_0230 Pseudonocardia dioxanivorans CB1190 choline dehydrogenase YP_004330358.1 247030 D 675635 CDS YP_004330359.1 331694120 10362036 248478..250511 1 NC_015312.1 KEGG: svi:Svir_19990 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 250511 10362036 Psed_0231 Pseudonocardia dioxanivorans CB1190 peptidyl-dipeptidase Dcp YP_004330359.1 248478 D 675635 CDS YP_004330360.1 331694121 10362037 251070..251801 1 NC_015312.1 KEGG: bge:BC1002_2527 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; winged helix family two component transcriptional regulator 251801 10362037 Psed_0232 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004330360.1 251070 D 675635 CDS YP_004330361.1 331694122 10362038 252112..252384 1 NC_015312.1 KEGG: amd:AMED_9197 transglycosylase associated protein; transglycosylase associated protein 252384 10362038 Psed_0233 Pseudonocardia dioxanivorans CB1190 transglycosylase associated protein YP_004330361.1 252112 D 675635 CDS YP_004330362.1 331694123 10362039 complement(252469..253521) 1 NC_015312.1 PFAM: Aminotransferase, class I/classII; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: svi:Svir_01830 aminotransferase; histidinol-phosphate aminotransferase 253521 10362039 Psed_0234 Pseudonocardia dioxanivorans CB1190 histidinol-phosphate aminotransferase YP_004330362.1 252469 R 675635 CDS YP_004330363.1 331694124 10362040 253578..254282 1 NC_015312.1 PFAM: Dienelactone hydrolase; KEGG: sen:SACE_0218 carboxymethylenebutenolidase; dienelactone hydrolase 254282 10362040 Psed_0235 Pseudonocardia dioxanivorans CB1190 dienelactone hydrolase YP_004330363.1 253578 D 675635 CDS YP_004330364.1 331694125 10362041 254324..256303 1 NC_015312.1 TIGRFAM: Acetoacetyl-CoA synthase; KEGG: msp:Mspyr1_32060 acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; acetoacetyl-CoA synthase 256303 10362041 Psed_0236 Pseudonocardia dioxanivorans CB1190 acetoacetyl-CoA synthase YP_004330364.1 254324 D 675635 CDS YP_004330365.1 331694126 10362044 complement(256746..257654) 1 NC_015312.1 KEGG: fre:Franean1_6636 NmrA family protein; NmrA family protein 257654 10362044 Psed_0237 Pseudonocardia dioxanivorans CB1190 NmrA family protein YP_004330365.1 256746 R 675635 CDS YP_004330366.1 331694127 10362045 257751..258302 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_0878 transcriptional regulator; TetR family transcriptional regulator 258302 10362045 Psed_0238 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330366.1 257751 D 675635 CDS YP_004330367.1 331694128 10362046 complement(258323..259624) 1 NC_015312.1 PFAM: Cation/H+ exchanger; KEGG: rha:RHA1_ro03768 CPA1 family Na(+)/H(+) antiporter; sodium/hydrogen exchanger 259624 10362046 Psed_0239 Pseudonocardia dioxanivorans CB1190 sodium/hydrogen exchanger YP_004330367.1 258323 R 675635 CDS YP_004330368.1 331694129 10362047 complement(259805..260275) 1 NC_015312.1 KEGG: cai:Caci_5138 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 260275 10362047 Psed_0240 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330368.1 259805 R 675635 CDS YP_004330369.1 331694130 10362048 complement(260620..260985) 1 NC_015312.1 KEGG: fal:FRAAL0869 hypothetical protein; hypothetical protein 260985 10362048 Psed_0241 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330369.1 260620 R 675635 CDS YP_004330370.1 331694131 10362049 complement(260982..261365) 1 NC_015312.1 KEGG: nca:Noca_4890 hypothetical protein; hypothetical protein 261365 10362049 Psed_0242 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330370.1 260982 R 675635 CDS YP_004330371.1 331694132 10362050 complement(261463..263037) 1 NC_015312.1 KEGG: cwo:Cwoe_3826 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Metal-dependent phosphohydrolase, HD subdomain; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 263037 10362050 Psed_0243 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004330371.1 261463 R 675635 CDS YP_004330372.1 331694133 10362051 263202..264107 1 NC_015312.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mil:ML5_2012 extradiol ring-cleavage dioxygenase class III protein subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 264107 10362051 Psed_0244 Pseudonocardia dioxanivorans CB1190 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004330372.1 263202 D 675635 CDS YP_004330373.1 331694134 10362052 complement(264184..264678) 1 NC_015312.1 KEGG: gob:Gobs_0027 hypothetical protein; hypothetical protein 264678 10362052 Psed_0245 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330373.1 264184 R 675635 CDS YP_004330374.1 331694135 10362053 complement(264813..265898) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: rer:RER_31070 iron-siderophore ABC transporter permease; ABC transporter permease 265898 10362053 Psed_0246 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004330374.1 264813 R 675635 CDS YP_004330375.1 331694136 10362054 complement(265895..266932) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: sro:Sros_7986 ABC transporter, permease, Fe3+-siderophore transport system; ABC transporter permease 266932 10362054 Psed_0247 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004330375.1 265895 R 675635 CDS YP_004330376.1 331694137 10362055 complement(267075..268106) 1 NC_015312.1 PFAM: Periplasmic binding protein; KEGG: msm:MSMEG_0020 periplasmic binding protein; ABC transporter substrate-binding protein 268106 10362055 Psed_0248 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004330376.1 267075 R 675635 CDS YP_004330377.1 331694138 10362056 268320..269645 1 NC_015312.1 KEGG: msm:MSMEG_0022 L-ornithine 5-monooxygenase; L-lysine 6-monooxygenase 269645 10362056 Psed_0249 Pseudonocardia dioxanivorans CB1190 L-lysine 6-monooxygenase YP_004330377.1 268320 D 675635 CDS YP_004330378.1 331694139 10362057 269646..271364 1 NC_015312.1 KEGG: req:REQ_07550 abc transporter integral membrane subunit; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; xenobiotic-transporting ATPase 271364 10362057 Psed_0250 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004330378.1 269646 D 675635 CDS YP_004330379.1 331694140 10362058 271364..273199 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: req:REQ_07560 abc transporter integral membrane subunit; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 273199 10362058 Psed_0251 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004330379.1 271364 D 675635 CDS YP_004330380.1 331694141 10362059 273268..297006 1 NC_015312.1 SMART: Polyketide synthase, phosphopantetheine-binding; Polyketide synthase, thioesterase domain; TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; KEGG: msm:MSMEG_0019 amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain; Thioesterase; amino acid adenylation protein 297006 10362059 Psed_0252 Pseudonocardia dioxanivorans CB1190 amino acid adenylation protein YP_004330380.1 273268 D 675635 CDS YP_004330381.1 331694142 10362060 297178..298605 1 NC_015312.1 KEGG: kfl:Kfla_1528 monooxygenase FAD-binding protein; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 298605 10362060 Psed_0253 Pseudonocardia dioxanivorans CB1190 pentachlorophenol monooxygenase YP_004330381.1 297178 D 675635 CDS YP_004330382.1 331694143 10362061 complement(298668..299153) 1 NC_015312.1 KEGG: rha:RHA1_ro03513 hypothetical protein; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 299153 10362061 Psed_0254 Pseudonocardia dioxanivorans CB1190 alkylhydroperoxidase YP_004330382.1 298668 R 675635 CDS YP_004330383.1 331694144 10362062 299254..300192 1 NC_015312.1 manually curated; TIGRFAM: RNA polymerase sigma-70, ECF type; RNA polymerase sigma-70; KEGG: rha:RHA1_ro03512 sigma factor, sigma 70 type, group 4; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 300192 10362062 Psed_0255 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330383.1 299254 D 675635 CDS YP_004330384.1 331694145 10362063 complement(300217..301038) 1 NC_015312.1 KEGG: mkm:Mkms_5393 MOSC domain-containing protein; manually curated; PFAM: Molybdenum cofactor sulfurase, C-terminal; MOSC, N-terminal beta barrel; MOSC domain-containing protein 301038 10362063 Psed_0256 Pseudonocardia dioxanivorans CB1190 MOSC domain-containing protein YP_004330384.1 300217 R 675635 CDS YP_004330385.1 331694146 10362064 301173..302291 1 NC_015312.1 KEGG: sro:Sros_5246 hypothetical protein; hypothetical protein 302291 10362064 Psed_0257 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330385.1 301173 D 675635 CDS YP_004330386.1 331694147 10362065 complement(302362..303984) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: vei:Veis_0939 extracellular solute-binding protein; ABC transporter substrate-binding protein 303984 10362065 Psed_0258 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004330386.1 302362 R 675635 CDS YP_004330387.1 331694148 10362066 304527..305588 1 NC_015312.1 KEGG: saq:Sare_2028 O-methyltransferase protein; PFAM: O-methyltransferase, family 2; O-demethylpuromycin O-methyltransferase 305588 10362066 Psed_0259 Pseudonocardia dioxanivorans CB1190 O-demethylpuromycin O-methyltransferase YP_004330387.1 304527 D 675635 CDS YP_004330388.1 331694149 10362067 complement(305624..306778) 1 NC_015312.1 KEGG: bbr:BB1086 thiolase; PFAM: Thiolase, N-terminal; propanoyl-CoA C-acyltransferase 306778 10362067 Psed_0260 Pseudonocardia dioxanivorans CB1190 propanoyl-CoA C-acyltransferase YP_004330388.1 305624 R 675635 CDS YP_004330389.1 331694150 10362068 complement(306808..307380) 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: sma:SAV_429 hypothetical protein; carboxymuconolactone decarboxylase 307380 10362068 Psed_0261 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004330389.1 306808 R 675635 CDS YP_004330390.1 331694151 10362069 complement(307380..308594) 1 NC_015312.1 KEGG: reu:Reut_A1827 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 308594 10362069 Psed_0262 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004330390.1 307380 R 675635 CDS YP_004330391.1 331694152 10362070 308711..309454 1 NC_015312.1 KEGG: rop:ROP_51360 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 309454 10362070 Psed_0263 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004330391.1 308711 D 675635 CDS YP_004330392.1 331694153 10362071 complement(309451..310251) 1 NC_015312.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: nml:Namu_0793 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 310251 10362071 Psed_0264 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004330392.1 309451 R 675635 CDS YP_004330393.1 331694154 10362072 complement(310253..311320) 1 NC_015312.1 KEGG: bcg:BCG9842_B2827 surface layer protein; surface layer protein 311320 10362072 Psed_0265 Pseudonocardia dioxanivorans CB1190 surface layer protein YP_004330393.1 310253 R 675635 CDS YP_004330394.1 331694155 10362073 complement(311317..311607) 1 NC_015312.1 PFAM: YCII-related; KEGG: bph:Bphy_0288 YCII-related; hypothetical protein 311607 10362073 Psed_0266 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330394.1 311317 R 675635 CDS YP_004330395.1 331694156 10362074 311798..313159 1 NC_015312.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: avn:Avin_31500 flavin-dependent oxidoreductase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 313159 10362074 Psed_0267 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004330395.1 311798 D 675635 CDS YP_004330396.1 331694157 10362075 313391..315727 1 NC_015312.1 KEGG: sen:SACE_2975 isoquinoline 1-oxidoreductase, beta subunit; Isoquinoline 1-oxidoreductase 315727 10362075 Psed_0268 Pseudonocardia dioxanivorans CB1190 Isoquinoline 1-oxidoreductase YP_004330396.1 313391 D 675635 CDS YP_004330397.1 331694158 10362076 315744..316214 1 NC_015312.1 KEGG: sen:SACE_2974 isoquinoline 1-oxidoreductase, alpha subunit; PFAM: [2Fe-2S]-binding; Ferredoxin; Isoquinoline 1-oxidoreductase 316214 10362076 Psed_0269 Pseudonocardia dioxanivorans CB1190 Isoquinoline 1-oxidoreductase YP_004330397.1 315744 D 675635 CDS YP_004330398.1 331694159 10362077 316223..316492 1 NC_015312.1 hypothetical protein 316492 10362077 Psed_0270 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330398.1 316223 D 675635 CDS YP_004330399.1 331694160 10362078 complement(316583..316837) 1 NC_015312.1 hypothetical protein 316837 10362078 Psed_0271 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330399.1 316583 R 675635 CDS YP_004330400.1 331694161 10362079 317357..318127 1 NC_015312.1 KEGG: gbr:Gbro_2781 hypothetical protein; hypothetical protein 318127 10362079 Psed_0272 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330400.1 317357 D 675635 CDS YP_004330401.1 331694162 10362080 318196..318810 1 NC_015312.1 KEGG: sma:SAV_7098 hypothetical protein; hypothetical protein 318810 10362080 Psed_0273 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330401.1 318196 D 675635 CDS YP_004330402.1 331694163 10362081 318880..319380 1 NC_015312.1 KEGG: fri:FraEuI1c_2884 aromatic-ring-hydroxylating dioxygenase beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 319380 10362081 Psed_0274 Pseudonocardia dioxanivorans CB1190 aromatic-ring-hydroxylating dioxygenase subunit beta YP_004330402.1 318880 D 675635 CDS YP_004330403.1 331694164 10362082 complement(319377..320462) 1 NC_015312.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: lxx:Lxx00940 secreted protein; Lactonase, 7-bladed beta propeller 320462 10362082 Psed_0275 Pseudonocardia dioxanivorans CB1190 Lactonase, 7-bladed beta propeller YP_004330403.1 319377 R 675635 CDS YP_004330404.1 331694165 10362083 320550..321977 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bay:RBAM_029980 YusP; major facilitator superfamily protein 321977 10362083 Psed_0276 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330404.1 320550 D 675635 CDS YP_004330405.1 331694166 10362084 322079..323740 1 NC_015312.1 KEGG: rop:ROP_49840 monooxygenase; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 323740 10362084 Psed_0277 Pseudonocardia dioxanivorans CB1190 pentachlorophenol monooxygenase YP_004330405.1 322079 D 675635 CDS YP_004330406.1 331694167 10362085 323850..324335 1 NC_015312.1 PFAM: Redoxin; KEGG: mmr:Mmar10_2222 redoxin domain-containing protein; redoxin domain-containing protein 324335 10362085 Psed_0278 Pseudonocardia dioxanivorans CB1190 redoxin domain-containing protein YP_004330406.1 323850 D 675635 CDS YP_004330407.1 331694168 10362087 325245..326636 1 NC_015312.1 KEGG: nml:Namu_5171 alanine--tRNA ligase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; alanyl-tRNA synthetase 326636 10362087 Psed_0280 Pseudonocardia dioxanivorans CB1190 alanyl-tRNA synthetase YP_004330407.1 325245 D 675635 CDS YP_004330408.1 331694169 10362088 complement(326829..328970) 1 NC_015312.1 KEGG: rer:RER_32310 hypothetical protein; hypothetical protein 328970 10362088 Psed_0281 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330408.1 326829 R 675635 CDS YP_004330409.1 331694170 10362089 complement(328984..330267) 1 NC_015312.1 PFAM: esterase; KEGG: art:Arth_4531 esterase; esterase 330267 10362089 Psed_0282 Pseudonocardia dioxanivorans CB1190 esterase YP_004330409.1 328984 R 675635 CDS YP_004330410.1 331694171 10362090 330422..330841 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amd:AMED_3391 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 330841 10362090 Psed_0283 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004330410.1 330422 D 675635 CDS YP_004330411.1 331694172 10362091 complement(330846..331235) 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mva:Mvan_0766 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 331235 10362091 Psed_0284 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004330411.1 330846 R 675635 CDS YP_004330412.1 331694173 10362092 331702..332535 1 NC_015312.1 SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: amd:AMED_0484 AraC family transcriptional regulator; AraC family transcriptional regulator 332535 10362092 Psed_0285 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004330412.1 331702 D 675635 CDS YP_004330413.1 331694174 10362093 332487..333485 1 NC_015312.1 KEGG: kfl:Kfla_3032 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SMART: Polyketide synthase/Fatty acid synthase, KR; NAD-dependent epimerase/dehydratase 333485 10362093 Psed_0286 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004330413.1 332487 D 675635 CDS YP_004330414.1 331694175 10362094 333497..334093 1 NC_015312.1 KEGG: mau:Micau_2727 hypothetical protein; hypothetical protein 334093 10362094 Psed_0287 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330414.1 333497 D 675635 CDS YP_004330415.1 331694176 10362095 334377..335423 1 NC_015312.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: rdn:HMPREF0733_10992 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; S-(hydroxymethyl)glutathione dehydrogenase 335423 10362095 Psed_0288 Pseudonocardia dioxanivorans CB1190 S-(hydroxymethyl)glutathione dehydrogenase YP_004330415.1 334377 D 675635 CDS YP_004330416.1 331694177 10362096 335560..336210 1 NC_015312.1 KEGG: fra:Francci3_1236 hypothetical protein; hypothetical protein 336210 10362096 Psed_0289 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330416.1 335560 D 675635 CDS YP_004330417.1 331694178 10362097 complement(336227..336964) 1 NC_015312.1 KEGG: tfu:Tfu_1507 methylated-DNA-(protein)-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Ada DNA repair, metal-binding; methylated-DNA--protein-cysteine methyltransferase 336964 10362097 Psed_0290 Pseudonocardia dioxanivorans CB1190 methylated-DNA--protein-cysteine methyltransferase YP_004330417.1 336227 R 675635 CDS YP_004330418.1 331694179 10362098 complement(336961..337572) 1 NC_015312.1 KEGG: sen:SACE_3367 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 337572 10362098 Psed_0291 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330418.1 336961 R 675635 CDS YP_004330419.1 331694180 10362099 complement(337611..338459) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro08833 epoxide hydrolase; alpha/beta hydrolase 338459 10362099 Psed_0292 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004330419.1 337611 R 675635 CDS YP_004330420.1 331694181 10362100 complement(338469..339857) 1 NC_015312.1 KEGG: nda:Ndas_2704 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 339857 10362100 Psed_0293 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004330420.1 338469 R 675635 CDS YP_004330421.1 331694182 10362102 complement(340259..341035) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: amd:AMED_5287 enoyl-CoA hydratase; enoyl-CoA hydratase 341035 10362102 Psed_0295 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004330421.1 340259 R 675635 CDS YP_004330422.1 331694183 10362103 complement(341035..342267) 1 NC_015312.1 KEGG: lsp:Bsph_0910 hypothetical protein; PFAM: CoA-transferase III; formyl-CoA transferase 342267 10362103 Psed_0296 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004330422.1 341035 R 675635 CDS YP_004330423.1 331694184 10362104 342479..342625 1 NC_015312.1 hypothetical protein 342625 10362104 Psed_0297 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330423.1 342479 D 675635 CDS YP_004330424.1 331694185 10362105 complement(342636..343319) 1 NC_015312.1 PFAM: Protein of unknown function DUF2086; KEGG: cak:Caul_4049 hypothetical protein; hypothetical protein 343319 10362105 Psed_0298 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330424.1 342636 R 675635 CDS YP_004330425.1 331694186 10362106 complement(343414..343812) 1 NC_015312.1 KEGG: msm:MSMEG_3380 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 343812 10362106 Psed_0299 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004330425.1 343414 R 675635 CDS YP_004330426.1 331694187 10362107 complement(343809..344819) 1 NC_015312.1 KEGG: dge:Dgeo_2171 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; pyridoxine 4-dehydrogenase 344819 10362107 Psed_0300 Pseudonocardia dioxanivorans CB1190 pyridoxine 4-dehydrogenase YP_004330426.1 343809 R 675635 CDS YP_004330427.1 331694188 10362108 344917..346092 1 NC_015312.1 KEGG: rha:RHA1_ro08443 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; alcohol dehydrogenase 346092 10362108 Psed_0301 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004330427.1 344917 D 675635 CDS YP_004330428.1 331694189 10362109 complement(346064..346741) 1 NC_015312.1 KEGG: nar:Saro_0570 epoxide hydrolase domain-containing phosphatase; TIGRFAM: HAD-superfamily phosphatase, subfamily IA/Epoxide hydrolase, N-terminal; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 346741 10362109 Psed_0302 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004330428.1 346064 R 675635 CDS YP_004330429.1 331694190 10362110 complement(346738..347715) 1 NC_015312.1 KEGG: mau:Micau_5172 DNA polymerase LigD polymerase subunit; TIGRFAM: DNA polymerase LigD, polymerase domain; PFAM: DNA primase, small subunit; DNA polymerase LigD, polymerase domain-containing protein 347715 10362110 Psed_0303 Pseudonocardia dioxanivorans CB1190 DNA polymerase LigD, polymerase domain-containing protein YP_004330429.1 346738 R 675635 CDS YP_004330430.1 331694191 10362111 347900..349144 1 NC_015312.1 PFAM: Transposase, mutator type; KEGG: gob:Gobs_2905 transposase mutator type; transposase mutator type 349144 10362111 Psed_0304 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004330430.1 347900 D 675635 CDS YP_004330431.1 331694192 10362112 complement(349343..351331) 1 NC_015312.1 KEGG: esc:Entcl_2744 cell wall surface anchor family protein; cell wall surface anchor family protein 351331 10362112 Psed_0305 Pseudonocardia dioxanivorans CB1190 cell wall surface anchor family protein YP_004330431.1 349343 R 675635 CDS YP_004330432.1 331694193 10362113 351556..352944 1 NC_015312.1 KEGG: sen:SACE_4673 hypothetical protein; PFAM: Aminotransferase class-III; acetylornithine transaminase 352944 10362113 Psed_0306 Pseudonocardia dioxanivorans CB1190 acetylornithine transaminase YP_004330432.1 351556 D 675635 CDS YP_004330433.1 331694194 10362114 352941..354101 1 NC_015312.1 KEGG: sen:SACE_3049 aminotransferase; PFAM: Aminotransferase, class I/classII; cystathionine beta-lyase 354101 10362114 Psed_0307 Pseudonocardia dioxanivorans CB1190 cystathionine beta-lyase YP_004330433.1 352941 D 675635 CDS YP_004330434.1 331694195 10362115 354145..356085 1 NC_015312.1 PFAM: ABC-1; KEGG: nml:Namu_4857 ABC-1 domain-containing protein; ABC transporter 356085 10362115 Psed_0308 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330434.1 354145 D 675635 CDS YP_004330435.1 331694196 10362116 complement(356218..358224) 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: mil:ML5_1065 abc transporter transmembrane region; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 358224 10362116 Psed_0309 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004330435.1 356218 R 675635 CDS YP_004330436.1 331694197 10362117 complement(358221..359954) 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: mil:ML5_1066 abc transporter related protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 359954 10362117 Psed_0310 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004330436.1 358221 R 675635 CDS YP_004330437.1 331694198 10362118 complement(359959..360609) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: kfl:Kfla_3613 transcriptional regulator, TetR family; TetR family transcriptional regulator 360609 10362118 Psed_0311 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330437.1 359959 R 675635 CDS YP_004330438.1 331694199 10362119 complement(360708..361127) 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 361127 10362119 Psed_0312 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004330438.1 360708 R 675635 CDS YP_004330439.1 331694200 10362120 complement(361433..361840) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_0703 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 361840 10362120 Psed_0313 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004330439.1 361433 R 675635 CDS YP_004330440.1 331694201 10362121 complement(361972..362691) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: kfl:Kfla_0717 hypothetical protein; hypothetical protein 362691 10362121 Psed_0314 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330440.1 361972 R 675635 CDS YP_004330441.1 331694202 10362122 362880..363668 1 NC_015312.1 KEGG: amd:AMED_4171 hypothetical protein; hypothetical protein 363668 10362122 Psed_0315 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330441.1 362880 D 675635 CDS YP_004330442.1 331694203 10362123 complement(363692..364399) 1 NC_015312.1 KEGG: amd:AMED_2410 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 364399 10362123 Psed_0316 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004330442.1 363692 R 675635 CDS YP_004330443.1 331694204 10362124 complement(364351..365472) 1 NC_015312.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: amd:AMED_2411 two-component system histidine kinase; histidine kinase 365472 10362124 Psed_0317 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004330443.1 364351 R 675635 CDS YP_004330444.1 331694205 10362125 complement(365469..365984) 1 NC_015312.1 KEGG: amd:AMED_8940 hypothetical protein; hypothetical protein 365984 10362125 Psed_0318 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330444.1 365469 R 675635 CDS YP_004330445.1 331694206 10362126 366171..366410 1 NC_015312.1 hypothetical protein 366410 10362126 Psed_0319 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330445.1 366171 D 675635 CDS YP_004330446.1 331694207 10362127 complement(366420..367034) 1 NC_015312.1 KEGG: sgr:SGR_303 hypothetical protein; hypothetical protein 367034 10362127 Psed_0320 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330446.1 366420 R 675635 CDS YP_004330447.1 331694208 10362128 complement(367031..367786) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: bcv:Bcav_3884 transcriptional regulator, TetR family; TetR family transcriptional regulator 367786 10362128 Psed_0321 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330447.1 367031 R 675635 CDS YP_004330448.1 331694209 10362129 367875..368834 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: aau:AAur_3041 ABC-type multidrug transport system, ATPase component; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 368834 10362129 Psed_0322 Pseudonocardia dioxanivorans CB1190 polyamine-transporting ATPase YP_004330448.1 367875 D 675635 CDS YP_004330449.1 331694210 10362130 368834..369631 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: aau:AAur_3042 ABC-type multidrug transport system, permease component; ABC transporter 369631 10362130 Psed_0323 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330449.1 368834 D 675635 CDS YP_004330450.1 331694211 10362131 complement(369686..370450) 1 NC_015312.1 PFAM: Nucleoside phosphorylase domain; KEGG: fal:FRAAL4002 purine-nucleoside phosphorylase; purine or other phosphorylase 1 370450 10362131 Psed_0324 Pseudonocardia dioxanivorans CB1190 purine or other phosphorylase 1 YP_004330450.1 369686 R 675635 CDS YP_004330451.1 331694212 10362132 370453..371073 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ami:Amir_1766 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 371073 10362132 Psed_0325 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004330451.1 370453 D 675635 CDS YP_004330452.1 331694213 10362133 371346..372380 1 NC_015312.1 KEGG: tcu:Tcur_1808 cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 372380 10362133 Psed_0326 Pseudonocardia dioxanivorans CB1190 cell envelope-related transcriptional attenuator YP_004330452.1 371346 D 675635 CDS YP_004330453.1 331694214 10362134 complement(372417..373409) 1 NC_015312.1 TIGRFAM: Ku, prokaryotic type; PFAM: DNA helicase, ATP-dependent, Ku type; KEGG: cfl:Cfla_1902 Ku protein; SMART: DNA helicase, ATP-dependent, Ku type; Ku protein 373409 10362134 Psed_0327 Pseudonocardia dioxanivorans CB1190 Ku protein YP_004330453.1 372417 R 675635 CDS YP_004330454.1 331694215 10362135 373507..374439 1 NC_015312.1 KEGG: cfl:Cfla_1903 DNA polymerase LigD, ligase domain protein; manually curated; PFAM: DNA ligase, ATP-dependent, central; ATP dependent DNA ligase 374439 10362135 Psed_0328 Pseudonocardia dioxanivorans CB1190 ATP dependent DNA ligase YP_004330454.1 373507 D 675635 CDS YP_004330455.1 331694216 10362136 374516..374704 1 NC_015312.1 KEGG: amd:AMED_0309 hypothetical protein; hypothetical protein 374704 10362136 Psed_0329 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330455.1 374516 D 675635 CDS YP_004330456.1 331694217 10362137 374867..375460 1 NC_015312.1 PFAM: Protein of unknown function DUF1089; KEGG: ami:Amir_0163 protein of unknown function DUF1089; hypothetical protein 375460 10362137 Psed_0330 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330456.1 374867 D 675635 CDS YP_004330457.1 331694218 10362138 complement(375486..376433) 1 NC_015312.1 PFAM: Prephenate dehydrogenase; KEGG: ami:Amir_0168 prephenate dehydrogenase; prephenate dehydrogenase 376433 10362138 Psed_0331 Pseudonocardia dioxanivorans CB1190 prephenate dehydrogenase YP_004330457.1 375486 R 675635 CDS YP_004330458.1 331694219 10362139 complement(376478..377806) 1 NC_015312.1 PFAM: Amidase; KEGG: nml:Namu_0017 amidase; amidase 377806 10362139 Psed_0332 Pseudonocardia dioxanivorans CB1190 amidase YP_004330458.1 376478 R 675635 CDS YP_004330459.1 331694220 10362140 complement(377853..379073) 1 NC_015312.1 TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: ami:Amir_0169 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase 379073 10362140 Psed_0333 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004330459.1 377853 R 675635 CDS YP_004330460.1 331694221 10362141 379178..379690 1 NC_015312.1 KEGG: svi:Svir_36890 hypothetical protein; hypothetical protein 379690 10362141 Psed_0334 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330460.1 379178 D 675635 CDS YP_004330461.1 331694222 10362142 379714..380175 1 NC_015312.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sen:SACE_0233 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase zinc-binding protein 380175 10362142 Psed_0335 Pseudonocardia dioxanivorans CB1190 CMP/dCMP deaminase zinc-binding protein YP_004330461.1 379714 D 675635 CDS YP_004330462.1 331694223 10362143 380228..380680 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: fre:Franean1_5579 NUDIX hydrolase; NUDIX hydrolase 380680 10362143 Psed_0336 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004330462.1 380228 D 675635 CDS YP_004330463.1 331694224 10362145 complement(380849..381163) 1 NC_015312.1 PFAM: Small multidrug resistance protein; KEGG: tbi:Tbis_0442 small multidrug resistance protein; small multidrug resistance protein 381163 10362145 Psed_0337 Pseudonocardia dioxanivorans CB1190 small multidrug resistance protein YP_004330463.1 380849 R 675635 CDS YP_004330464.1 331694225 10362146 381334..382065 1 NC_015312.1 KEGG: sgr:SGR_4166 hypothetical protein; hypothetical protein 382065 10362146 Psed_0338 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330464.1 381334 D 675635 CDS YP_004330465.1 331694226 10362147 382253..383623 1 NC_015312.1 KEGG: sen:SACE_0625 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; Bcr/CflA subfamily drug resistance transporter 383623 10362147 Psed_0339 Pseudonocardia dioxanivorans CB1190 Bcr/CflA subfamily drug resistance transporter YP_004330465.1 382253 D 675635 CDS YP_004330466.1 331694227 10362148 383736..384320 1 NC_015312.1 hypothetical protein 384320 10362148 Psed_0340 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330466.1 383736 D 675635 CDS YP_004330467.1 331694228 10362149 384373..385458 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: rxy:Rxyl_3149 glycosyl transferase protein; type 12 methyltransferase 385458 10362149 Psed_0341 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004330467.1 384373 D 675635 CDS YP_004330468.1 331694229 10362150 385497..385856 1 NC_015312.1 KEGG: fal:FRAAL0866 hypothetical protein; hypothetical protein 385856 10362150 Psed_0342 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330468.1 385497 D 675635 CDS YP_004330469.1 331694230 10362151 complement(385916..387205) 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: rha:RHA1_ro04297 dipeptidase; amidohydrolase 387205 10362151 Psed_0343 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004330469.1 385916 R 675635 CDS YP_004330470.1 331694231 10362152 complement(387238..387999) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro04298 hydrolase; alpha/beta hydrolase 387999 10362152 Psed_0344 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004330470.1 387238 R 675635 CDS YP_004330471.1 331694232 10362153 complement(388030..388920) 1 NC_015312.1 KEGG: bpt:Bpet4196 fumarylacetoacetate hydrolase protein; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 388920 10362153 Psed_0345 Pseudonocardia dioxanivorans CB1190 ureidoglycolate lyase YP_004330471.1 388030 R 675635 CDS YP_004330472.1 331694233 10362154 389077..389739 1 NC_015312.1 KEGG: axy:AXYL_04513 GntR family regulatory protein 50; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 389739 10362154 Psed_0346 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004330472.1 389077 D 675635 CDS YP_004330473.1 331694234 10362155 complement(389743..390465) 1 NC_015312.1 KEGG: mau:Micau_2738 hypothetical protein; hypothetical protein 390465 10362155 Psed_0347 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330473.1 389743 R 675635 CDS YP_004330474.1 331694235 10362158 390996..393485 1 NC_015312.1 SMART: ATPase, AAA+ type, core; manually curated; KEGG: sen:SACE_0251 DNA polymerase III gamma subunit; TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; DNA polymerase III subunits gamma and tau 393485 10362158 Psed_0348 Pseudonocardia dioxanivorans CB1190 DNA polymerase III subunits gamma and tau YP_004330474.1 390996 D 675635 CDS YP_004330475.1 331694236 10362159 393574..395952 1 NC_015312.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: rer:RER_45380 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; ATPase 395952 10362159 Psed_0349 Pseudonocardia dioxanivorans CB1190 ATPase YP_004330475.1 393574 D 675635 CDS YP_004330476.1 331694237 10362160 complement(395977..396999) 1 NC_015312.1 PFAM: Bile acid:sodium symporter; KEGG: amd:AMED_6378 predicted Na+-dependent transporter; bile acid:sodium symporter 396999 10362160 Psed_0350 Pseudonocardia dioxanivorans CB1190 bile acid:sodium symporter YP_004330476.1 395977 R 675635 CDS YP_004330477.1 331694238 10362161 397058..397921 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: scb:SCAB_16931 LysR family transcriptional regulator; LysR family transcriptional regulator 397921 10362161 Psed_0351 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004330477.1 397058 D 675635 CDS YP_004330478.1 331694239 10362162 complement(397942..398772) 1 NC_015312.1 KEGG: amd:AMED_8913 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; cell wall hydrolase/autolysin 398772 10362162 Psed_0352 Pseudonocardia dioxanivorans CB1190 cell wall hydrolase/autolysin YP_004330478.1 397942 R 675635 CDS YP_004330479.1 331694240 10362163 398854..399195 1 NC_015312.1 TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: rop:ROP_41370 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein 399195 10362163 Psed_0353 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330479.1 398854 D 675635 CDS YP_004330480.1 331694241 10362164 399200..399817 1 NC_015312.1 SMART: Toprim domain; TIGRFAM: RecR protein; KEGG: svi:Svir_36550 recombination protein RecR; HAMAP: RecR protein; PFAM: Toprim domain; Zinc finger C4-type, RecR; Recombination protein recR 399817 10362164 Psed_0354 Pseudonocardia dioxanivorans CB1190 Recombination protein recR YP_004330480.1 399200 D 675635 CDS YP_004330481.1 331694242 10362165 complement(399846..400079) 1 NC_015312.1 hypothetical protein 400079 10362165 Psed_0355 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330481.1 399846 R 675635 CDS YP_004330482.1 331694243 10362166 complement(400231..400413) 1 NC_015312.1 hypothetical protein 400413 10362166 Psed_0356 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330482.1 400231 R 675635 CDS YP_004330483.1 331694244 10362167 400846..401742 1 NC_015312.1 KEGG: mil:ML5_0071 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 401742 10362167 Psed_0357 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004330483.1 400846 D 675635 CDS YP_004330484.1 331694245 10362168 401739..401924 1 NC_015312.1 PFAM: Domain of unknown function DUF397; KEGG: svi:Svir_12060 protein of unknown function (DUF397); hypothetical protein 401924 10362168 Psed_0358 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330484.1 401739 D 675635 CDS YP_004330485.1 331694246 10362169 complement(402097..403893) 1 NC_015312.1 KEGG: ami:Amir_0213 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; TIGRFAM: Yeast 2-isopropylmalate synthase; HAMAP: 2-isopropylmalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase 403893 10362169 Psed_0359 Pseudonocardia dioxanivorans CB1190 2-isopropylmalate synthase YP_004330485.1 402097 R 675635 CDS YP_004330486.1 331694247 10362170 404193..404495 1 NC_015312.1 KEGG: amd:AMED_8885 hypothetical protein; hypothetical protein 404495 10362170 Psed_0360 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330486.1 404193 D 675635 CDS YP_004330487.1 331694248 10362171 complement(404539..405756) 1 NC_015312.1 KEGG: ami:Amir_0216 hypothetical protein; hypothetical protein 405756 10362171 Psed_0361 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330487.1 404539 R 675635 CDS YP_004330488.1 331694249 10362172 405994..407259 1 NC_015312.1 KEGG: nml:Namu_0694 aspartate kinase; TIGRFAM: Aspartate kinase domain; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase 407259 10362172 Psed_0362 Pseudonocardia dioxanivorans CB1190 aspartate kinase YP_004330488.1 405994 D 675635 CDS YP_004330489.1 331694250 10362173 407256..408329 1 NC_015312.1 SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: sen:SACE_0283 aspartate-semialdehyde dehydrogenase, USG-1 related; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase 408329 10362173 Psed_0363 Pseudonocardia dioxanivorans CB1190 aspartate-semialdehyde dehydrogenase YP_004330489.1 407256 D 675635 CDS YP_004330490.1 331694251 10362174 complement(408345..409517) 1 NC_015312.1 KEGG: ami:Amir_0216 hypothetical protein; hypothetical protein 409517 10362174 Psed_0364 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330490.1 408345 R 675635 CDS YP_004330491.1 331694252 10362175 409604..410110 1 NC_015312.1 KEGG: sen:SACE_0433 plant-type carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; carbonic anhydrase 410110 10362175 Psed_0365 Pseudonocardia dioxanivorans CB1190 carbonic anhydrase YP_004330491.1 409604 D 675635 CDS YP_004330492.1 331694253 10362177 complement(410427..410816) 1 NC_015312.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: krh:KRH_04440 hypothetical protein; thiol-disulfide oxidoreductase 410816 10362177 Psed_0367 Pseudonocardia dioxanivorans CB1190 thiol-disulfide oxidoreductase YP_004330492.1 410427 R 675635 CDS YP_004330493.1 331694254 10362178 410845..411204 1 NC_015312.1 KEGG: tkm:TK90_0559 arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: Arsenate reductase-like; arsenate reductase 411204 10362178 Psed_0368 Pseudonocardia dioxanivorans CB1190 arsenate reductase YP_004330493.1 410845 D 675635 CDS YP_004330494.1 331694255 10362179 complement(411215..412285) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; Amino acid-binding ACT; KEGG: sma:SAV_7063 hypothetical protein; GCN5-like N-acetyltransferase 412285 10362179 Psed_0369 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004330494.1 411215 R 675635 CDS YP_004330495.1 331694256 10362180 complement(412377..412631) 1 NC_015312.1 hypothetical protein 412631 10362180 Psed_0370 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330495.1 412377 R 675635 CDS YP_004330496.1 331694257 10362181 complement(412669..414513) 1 NC_015312.1 KEGG: sen:SACE_0309 peptide hydrolase; acylaminoacyl peptidase 414513 10362181 Psed_0371 Pseudonocardia dioxanivorans CB1190 acylaminoacyl peptidase YP_004330496.1 412669 R 675635 CDS YP_004330497.1 331694258 10362182 414581..415084 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: gob:Gobs_0130 hypothetical protein; hypothetical protein 415084 10362182 Psed_0372 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330497.1 414581 D 675635 CDS YP_004330498.1 331694259 10362183 complement(415112..415771) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mil:ML5_3711 regulatory protein TetR; TetR family transcriptional regulator 415771 10362183 Psed_0373 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330498.1 415112 R 675635 CDS YP_004330499.1 331694260 10362184 415829..416317 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: mil:ML5_3712 cupin 2 conserved barrel domain protein; cupin 416317 10362184 Psed_0374 Pseudonocardia dioxanivorans CB1190 cupin YP_004330499.1 415829 D 675635 CDS YP_004330500.1 331694261 10362185 complement(416352..416939) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_1492 transcriptional regulator, TetR family; TetR family transcriptional regulator 416939 10362185 Psed_0375 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330500.1 416352 R 675635 CDS YP_004330501.1 331694262 10362186 complement(417045..418286) 1 NC_015312.1 KEGG: mau:Micau_0584 sigma-70 family RNA polymerase; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 418286 10362186 Psed_0376 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330501.1 417045 R 675635 CDS YP_004330502.1 331694263 10362187 complement(418283..418648) 1 NC_015312.1 PFAM: YCII-related; KEGG: mil:ML5_0780 YCII-related protein; hypothetical protein 418648 10362187 Psed_0377 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330502.1 418283 R 675635 CDS YP_004330503.1 331694264 10362188 418826..419461 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: reu:Reut_A0240 bifunctional deaminase-reductase, C-terminal; bifunctional deaminase-reductase domain-containing protein 419461 10362188 Psed_0378 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004330503.1 418826 D 675635 CDS YP_004330504.1 331694265 10362189 419600..419851 1 NC_015312.1 hypothetical protein 419851 10362189 Psed_0379 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330504.1 419600 D 675635 CDS YP_004330505.1 331694266 10362190 complement(419866..420819) 1 NC_015312.1 PFAM: ATP-grasp fold, RimK-type; KEGG: hau:Haur_5021 RimK domain-containing protein ATP-grasp; RimK domain-containing protein ATP-grasp 420819 10362190 Psed_0380 Pseudonocardia dioxanivorans CB1190 RimK domain-containing protein ATP-grasp YP_004330505.1 419866 R 675635 CDS YP_004330506.1 331694267 10362191 complement(420816..421010) 1 NC_015312.1 hypothetical protein 421010 10362191 Psed_0381 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330506.1 420816 R 675635 CDS YP_004330507.1 331694268 10362192 complement(421053..421274) 1 NC_015312.1 hypothetical protein 421274 10362192 Psed_0382 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330507.1 421053 R 675635 CDS YP_004330508.1 331694269 10362193 421579..422319 1 NC_015312.1 hypothetical protein 422319 10362193 Psed_0383 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330508.1 421579 D 675635 CDS YP_004330509.1 331694270 10362194 422349..423062 1 NC_015312.1 manually curated; TIGRFAM: Protein of unknown function DUF124; KEGG: azc:AZC_0415 hypothetical protein; PFAM: Protein of unknown function DUF124; hypothetical protein 423062 10362194 Psed_0384 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330509.1 422349 D 675635 CDS YP_004330510.1 331694271 10362195 complement(423020..424615) 1 NC_015312.1 KEGG: gsu:GSU0248 BchE/P-methylase protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein 424615 10362195 Psed_0385 Pseudonocardia dioxanivorans CB1190 Radical SAM domain-containing protein YP_004330510.1 423020 R 675635 CDS YP_004330511.1 331694272 10362196 complement(424749..425387) 1 NC_015312.1 PFAM: ThiJ/PfpI; KEGG: mmi:MMAR_0071 transcriptional regulatory protein; ThiJ/PfpI domain-containing protein 425387 10362196 Psed_0386 Pseudonocardia dioxanivorans CB1190 ThiJ/PfpI domain-containing protein YP_004330511.1 424749 R 675635 CDS YP_004330512.1 331694273 10362197 complement(425401..426375) 1 NC_015312.1 KEGG: mjl:Mjls_0741 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 426375 10362197 Psed_0387 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004330512.1 425401 R 675635 CDS YP_004330513.1 331694274 10362198 426517..427914 1 NC_015312.1 KEGG: fal:FRAAL0556 carboxylesterase; PFAM: Carboxylesterase, type B; acetylcholinesterase 427914 10362198 Psed_0388 Pseudonocardia dioxanivorans CB1190 acetylcholinesterase YP_004330513.1 426517 D 675635 CDS YP_004330514.1 331694275 10362199 428058..428681 1 NC_015312.1 KEGG: htu:Htur_4265 hypothetical protein; hypothetical protein 428681 10362199 Psed_0389 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330514.1 428058 D 675635 CDS YP_004330515.1 331694276 10362200 428678..429085 1 NC_015312.1 KEGG: sti:Sthe_2946 hypothetical protein; hypothetical protein 429085 10362200 Psed_0390 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330515.1 428678 D 675635 CDS YP_004330516.1 331694277 10362202 complement(429280..430218) 1 NC_015312.1 PFAM: Metallo-dependent phosphatase; KEGG: ami:Amir_0233 metallophosphoesterase; metallophosphoesterase 430218 10362202 Psed_0391 Pseudonocardia dioxanivorans CB1190 metallophosphoesterase YP_004330516.1 429280 R 675635 CDS YP_004330517.1 331694278 10362203 430222..430710 1 NC_015312.1 KEGG: sen:SACE_0312 GatB/YqeY; hypothetical protein 430710 10362203 Psed_0392 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330517.1 430222 D 675635 CDS YP_004330518.1 331694279 10362204 complement(430735..433593) 1 NC_015312.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: rha:RHA1_ro04353 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase I 433593 10362204 Psed_0393 Pseudonocardia dioxanivorans CB1190 DNA topoisomerase I YP_004330518.1 430735 R 675635 CDS YP_004330519.1 331694280 10362205 complement(433817..434452) 1 NC_015312.1 KEGG: sen:SACE_0376 hypothetical protein; hypothetical protein 434452 10362205 Psed_0394 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330519.1 433817 R 675635 CDS YP_004330520.1 331694281 10362206 complement(434527..435120) 1 NC_015312.1 KEGG: ami:Amir_0285 hypothetical protein; hypothetical protein 435120 10362206 Psed_0395 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330520.1 434527 R 675635 CDS YP_004330521.1 331694282 10362207 complement(435233..435775) 1 NC_015312.1 KEGG: ami:Amir_0285 hypothetical protein; hypothetical protein 435775 10362207 Psed_0396 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330521.1 435233 R 675635 CDS YP_004330522.1 331694283 10362208 complement(436062..438389) 1 NC_015312.1 PFAM: Pyrophosphate-energised proton pump; TIGRFAM: Pyrophosphate-energised proton pump; HAMAP: Pyrophosphate-energised proton pump; KEGG: ami:Amir_0284 membrane-bound proton-translocating pyrophosphatase; pyrophosphate-energized proton pump 438389 10362208 Psed_0397 Pseudonocardia dioxanivorans CB1190 pyrophosphate-energized proton pump YP_004330522.1 436062 R 675635 CDS YP_004330523.1 331694284 10362209 438685..441036 1 NC_015312.1 TIGRFAM: DEAD/DEAH-box helicase, PFAM: Protein of unknown function DUF1998; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: svi:Svir_35840 helicase protein with metal-binding cysteine cluster; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; helicase/secretion DEAH-box helicase 441036 10362209 Psed_0398 Pseudonocardia dioxanivorans CB1190 helicase/secretion DEAH-box helicase YP_004330523.1 438685 D 675635 CDS YP_004330524.1 331694285 10362210 complement(441519..442505) 1 NC_015312.1 TIGRFAM: Helicase/secretion neighbourhood TadE-like protein; KEGG: mab:MAB_0475 hypothetical protein; helicase/secretion neighborhood TadE-like protein 442505 10362210 Psed_0399 Pseudonocardia dioxanivorans CB1190 helicase/secretion neighborhood TadE-like protein YP_004330524.1 441519 R 675635 CDS YP_004330525.1 331694286 10362211 complement(442538..442792) 1 NC_015312.1 KEGG: rha:RHA1_ro04343 hypothetical protein; hypothetical protein 442792 10362211 Psed_0400 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330525.1 442538 R 675635 CDS YP_004330526.1 331694287 10362212 complement(442848..443579) 1 NC_015312.1 PFAM: Type II secretion system F domain; KEGG: rop:ROP_42520 hypothetical membrane protein; type II secretion system F domain-containing protein 443579 10362212 Psed_0401 Pseudonocardia dioxanivorans CB1190 type II secretion system F domain-containing protein YP_004330526.1 442848 R 675635 CDS YP_004330527.1 331694288 10362213 complement(443576..444385) 1 NC_015312.1 PFAM: Type II secretion system F domain; KEGG: ami:Amir_0277 type II secretion system protein; type II secretion system F domain-containing protein 444385 10362213 Psed_0402 Pseudonocardia dioxanivorans CB1190 type II secretion system F domain-containing protein YP_004330527.1 443576 R 675635 CDS YP_004330528.1 331694289 10362214 complement(444379..445527) 1 NC_015312.1 KEGG: nfa:nfa3590 hypothetical protein; TIGRFAM: Helicase/secretion neighbourhood ATPase; PFAM: Type II secretion system protein E; helicase/secretion ATPase 445527 10362214 Psed_0403 Pseudonocardia dioxanivorans CB1190 helicase/secretion ATPase YP_004330528.1 444379 R 675635 CDS YP_004330529.1 331694290 10362215 complement(445524..446603) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03815, CpaE-like; KEGG: ami:Amir_0275 hypothetical protein; helicase/secretion CpaE-like protein 446603 10362215 Psed_0404 Pseudonocardia dioxanivorans CB1190 helicase/secretion CpaE-like protein YP_004330529.1 445524 R 675635 CDS YP_004330530.1 331694291 10362216 447100..447912 1 NC_015312.1 manually curated; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: sen:SACE_0365 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 447912 10362216 Psed_0405 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004330530.1 447100 D 675635 CDS YP_004330531.1 331694292 10362217 complement(448397..449152) 1 NC_015312.1 KEGG: rha:RHA1_ro04337 hypothetical protein; hypothetical protein 449152 10362217 Psed_0406 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330531.1 448397 R 675635 CDS YP_004330532.1 331694293 10362218 449345..451321 1 NC_015312.1 PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate-CoA ligase; HAMAP: Acetate-CoA ligase; KEGG: ami:Amir_0262 acetyl-CoA synthetase; acetyl-coenzyme A synthetase 451321 10362218 Psed_0407 Pseudonocardia dioxanivorans CB1190 acetyl-coenzyme A synthetase YP_004330532.1 449345 D 675635 CDS YP_004330533.1 331694294 10362221 452801..453544 1 NC_015312.1 PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: fri:FraEuI1c_3893 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 453544 10362221 Psed_0410 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004330533.1 452801 D 675635 CDS YP_004330534.1 331694295 10362222 453553..454545 1 NC_015312.1 PFAM: ATPase, AAA-3; KEGG: fri:FraEuI1c_3894 ATPase associated with various cellular activities AAA_3; ATPase 454545 10362222 Psed_0411 Pseudonocardia dioxanivorans CB1190 ATPase YP_004330534.1 453553 D 675635 CDS YP_004330535.1 331694296 10362223 454542..455432 1 NC_015312.1 KEGG: pol:Bpro_3892 hypothetical protein; PFAM: Domain of unknown function DUF58; SMART: von Willebrand factor, type A; hypothetical protein 455432 10362223 Psed_0412 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330535.1 454542 D 675635 CDS YP_004330536.1 331694297 10362224 455432..456430 1 NC_015312.1 KEGG: azo:azo2860 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 456430 10362224 Psed_0413 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004330536.1 455432 D 675635 CDS YP_004330537.1 331694298 10362225 456432..457520 1 NC_015312.1 KEGG: fri:FraEuI1c_3897 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 457520 10362225 Psed_0414 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004330537.1 456432 D 675635 CDS YP_004330538.1 331694299 10362226 457551..457979 1 NC_015312.1 PFAM: Peptide chain release factor class I/class II; KEGG: amd:AMED_9033 peptide chain release factor class I; class I peptide chain release factor 457979 10362226 Psed_0415 Pseudonocardia dioxanivorans CB1190 class I peptide chain release factor YP_004330538.1 457551 D 675635 CDS YP_004330539.1 331694300 10362227 458065..459285 1 NC_015312.1 TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: amd:AMED_8822 Na+:H+ antiporter, NhaA family; PFAM: Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter NhaA 459285 10362227 Psed_0416 Pseudonocardia dioxanivorans CB1190 Na(+)/H(+) antiporter NhaA YP_004330539.1 458065 D 675635 CDS YP_004330540.1 331694301 10362228 459529..460014 1 NC_015312.1 KEGG: req:REQ_05220 integral membrane protein; hypothetical protein 460014 10362228 Psed_0417 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330540.1 459529 D 675635 CDS YP_004330541.1 331694302 10362229 460018..461004 1 NC_015312.1 KEGG: ami:Amir_0259 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; soluble epoxide hydrolase 461004 10362229 Psed_0418 Pseudonocardia dioxanivorans CB1190 soluble epoxide hydrolase YP_004330541.1 460018 D 675635 CDS YP_004330542.1 331694303 10362230 complement(460940..461959) 1 NC_015312.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: svi:Svir_38180 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 461959 10362230 Psed_0419 Pseudonocardia dioxanivorans CB1190 glycerophosphoryl diester phosphodiesterase YP_004330542.1 460940 R 675635 CDS YP_004330543.1 331694304 10362231 462121..463374 1 NC_015312.1 PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: amd:AMED_9086 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 463374 10362231 Psed_0420 Pseudonocardia dioxanivorans CB1190 phosphoribosylamine--glycine ligase YP_004330543.1 462121 D 675635 CDS YP_004330544.1 331694305 10362232 complement(463479..464300) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nfa:nfa21520 transcriptional regulator; LysR family transcriptional regulator 464300 10362232 Psed_0421 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004330544.1 463479 R 675635 CDS YP_004330545.1 331694306 10362234 464800..465963 1 NC_015312.1 KEGG: mva:Mvan_5290 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; aspartate transaminase 465963 10362234 Psed_0423 Pseudonocardia dioxanivorans CB1190 aspartate transaminase YP_004330545.1 464800 D 675635 CDS YP_004330546.1 331694307 10362235 466022..466789 1 NC_015312.1 PFAM: Ion transport 2; KEGG: ach:Achl_2774 ion transport 2 domain protein; Ion transport 2 domain-containing protein 466789 10362235 Psed_0424 Pseudonocardia dioxanivorans CB1190 Ion transport 2 domain-containing protein YP_004330546.1 466022 D 675635 CDS YP_004330547.1 331694308 10362236 complement(466734..467897) 1 NC_015312.1 KEGG: ami:Amir_6894 aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; tjhreonine aldolase 467897 10362236 Psed_0425 Pseudonocardia dioxanivorans CB1190 tjhreonine aldolase YP_004330547.1 466734 R 675635 CDS YP_004330548.1 331694309 10362237 468081..468608 1 NC_015312.1 KEGG: ami:Amir_6893 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-E type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 468608 10362237 Psed_0426 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330548.1 468081 D 675635 CDS YP_004330549.1 331694310 10362238 468622..469281 1 NC_015312.1 KEGG: sen:SACE_7160 hypothetical protein; hypothetical protein 469281 10362238 Psed_0427 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330549.1 468622 D 675635 CDS YP_004330550.1 331694311 10362239 469345..470763 1 NC_015312.1 TIGRFAM: Adenylosuccinate lyase; KEGG: sma:SAV_7077 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal metazoa/fungi; adenylosuccinate lyase 470763 10362239 Psed_0428 Pseudonocardia dioxanivorans CB1190 adenylosuccinate lyase YP_004330550.1 469345 D 675635 CDS YP_004330551.1 331694312 10362240 470760..471611 1 NC_015312.1 PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: SAICAR synthetase; KEGG: sna:Snas_4833 phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 471611 10362240 Psed_0429 Pseudonocardia dioxanivorans CB1190 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004330551.1 470760 D 675635 CDS YP_004330552.1 331694313 10362241 471667..472410 1 NC_015312.1 KEGG: rop:ROP_49090 hypothetical protein; hypothetical protein 472410 10362241 Psed_0430 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330552.1 471667 D 675635 CDS YP_004330553.1 331694314 10362242 complement(473078..473782) 1 NC_015312.1 KEGG: sen:SACE_7147 beta-lactamase-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 473782 10362242 Psed_0431 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004330553.1 473078 R 675635 CDS YP_004330554.1 331694315 10362243 473850..474083 1 NC_015312.1 manually curated; TIGRFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; KEGG: svi:Svir_38000 phosphoribosylformylglycinamidine synthase, PurS protein; PFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; phosphoribosylformylglycinamidine synthase PurS 474083 10362243 Psed_0432 Pseudonocardia dioxanivorans CB1190 phosphoribosylformylglycinamidine synthase PurS YP_004330554.1 473850 D 675635 CDS YP_004330555.1 331694316 10362244 474080..474766 1 NC_015312.1 PFAM: CobB/CobQ-like glutamine amidotransferase; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; HAMAP: Phosphoribosylformylglycinamidine synthase I; KEGG: tpr:Tpau_3613 phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase 1 474766 10362244 Psed_0433 Pseudonocardia dioxanivorans CB1190 phosphoribosylformylglycinamidine synthase 1 YP_004330555.1 474080 D 675635 CDS YP_004330556.1 331694317 10362245 474860..476053 1 NC_015312.1 KEGG: mil:ML5_2885 response regulator receiver modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; Protein phosphatase 2C-like; response regulator receiver modulated serine phosphatase 476053 10362245 Psed_0434 Pseudonocardia dioxanivorans CB1190 response regulator receiver modulated serine phosphatase YP_004330556.1 474860 D 675635 CDS YP_004330557.1 331694318 10362246 476050..477840 1 NC_015312.1 KEGG: cwo:Cwoe_5360 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; CHASE3; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 477840 10362246 Psed_0435 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004330557.1 476050 D 675635 CDS YP_004330558.1 331694319 10362247 477837..478280 1 NC_015312.1 KEGG: tcu:Tcur_1124 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 478280 10362247 Psed_0436 Pseudonocardia dioxanivorans CB1190 response regulator receiver protein YP_004330558.1 477837 D 675635 CDS YP_004330559.1 331694320 10362249 478676..480961 1 NC_015312.1 PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase II; HAMAP: Phosphoribosylformylglycinamidine synthase II; KEGG: sen:SACE_7142 phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase 2 480961 10362249 Psed_0438 Pseudonocardia dioxanivorans CB1190 phosphoribosylformylglycinamidine synthase 2 YP_004330559.1 478676 D 675635 CDS YP_004330560.1 331694321 10362250 480954..481286 1 NC_015312.1 KEGG: saq:Sare_0162 hypothetical protein; hypothetical protein 481286 10362250 Psed_0439 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330560.1 480954 D 675635 CDS YP_004330561.1 331694322 10362251 481427..483631 1 NC_015312.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-3; KEGG: ami:Amir_6871 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 483631 10362251 Psed_0440 Pseudonocardia dioxanivorans CB1190 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004330561.1 481427 D 675635 CDS YP_004330562.1 331694323 10362252 483669..485252 1 NC_015312.1 TIGRFAM: Amidophosphoribosyl transferase; KEGG: sen:SACE_7125 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase 485252 10362252 Psed_0441 Pseudonocardia dioxanivorans CB1190 amidophosphoribosyltransferase YP_004330562.1 483669 D 675635 CDS YP_004330563.1 331694324 10362253 485605..486729 1 NC_015312.1 TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: sen:SACE_7124 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; phosphoribosylformylglycinamidine cyclo-ligase 486729 10362253 Psed_0442 Pseudonocardia dioxanivorans CB1190 phosphoribosylformylglycinamidine cyclo-ligase YP_004330563.1 485605 D 675635 CDS YP_004330564.1 331694325 10362254 complement(487022..487717) 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: sna:Snas_0306 NUDIX hydrolase; NUDIX hydrolase 487717 10362254 Psed_0443 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004330564.1 487022 R 675635 CDS YP_004330565.1 331694326 10362255 complement(487877..488236) 1 NC_015312.1 KEGG: gob:Gobs_1106 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 488236 10362255 Psed_0444 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004330565.1 487877 R 675635 CDS YP_004330566.1 331694327 10362256 complement(488238..489188) 1 NC_015312.1 KEGG: sgr:SGR_2260 hypothetical protein; hypothetical protein 489188 10362256 Psed_0445 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330566.1 488238 R 675635 CDS YP_004330567.1 331694328 10362257 complement(489360..489566) 1 NC_015312.1 KEGG: car:cauri_2161 hypothetical protein; hypothetical protein 489566 10362257 Psed_0446 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330567.1 489360 R 675635 CDS YP_004330568.1 331694329 10362258 489740..490570 1 NC_015312.1 KEGG: ami:Amir_6841 hypothetical protein; hypothetical protein 490570 10362258 Psed_0447 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330568.1 489740 D 675635 CDS YP_004330569.1 331694330 10362259 complement(490592..491680) 1 NC_015312.1 KEGG: ami:Amir_6837 folate-binding protein YgfZ; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; folate-binding protein YgfZ 491680 10362259 Psed_0448 Pseudonocardia dioxanivorans CB1190 folate-binding protein YgfZ YP_004330569.1 490592 R 675635 CDS YP_004330570.1 331694331 10362260 complement(491677..492156) 1 NC_015312.1 PFAM: Ferric-uptake regulator; KEGG: ami:Amir_6836 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 492156 10362260 Psed_0449 Pseudonocardia dioxanivorans CB1190 Fur family ferric uptake regulator YP_004330570.1 491677 R 675635 CDS YP_004330571.1 331694332 10362261 492358..494766 1 NC_015312.1 KEGG: lbz:LbrM34_V2.0530 proteophosphoglycan ppg4; hypothetical protein 494766 10362261 Psed_0450 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330571.1 492358 D 675635 CDS YP_004330572.1 331694333 10362262 494812..496689 1 NC_015312.1 KEGG: cbr:CBG02561 Hypothetical protein CBG02561; hypothetical protein 496689 10362262 Psed_0451 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330572.1 494812 D 675635 CDS YP_004330573.1 331694334 10362263 complement(496791..497435) 1 NC_015312.1 KEGG: ami:Amir_6831 hypothetical protein; HAMAP: Uncharacterised protein family UPF0678; PFAM: Domain of unknown function DUF1794; hypothetical protein 497435 10362263 Psed_0452 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330573.1 496791 R 675635 CDS YP_004330574.1 331694335 10362264 complement(497432..497539) 1 NC_015312.1 hypothetical protein 497539 10362264 Psed_0453 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330574.1 497432 R 675635 CDS YP_004330575.1 331694336 10362265 complement(497650..497949) 1 NC_015312.1 PFAM: Protein of unknown function DUF1416; KEGG: nfa:nfa5930 hypothetical protein; hypothetical protein 497949 10362265 Psed_0454 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330575.1 497650 R 675635 CDS YP_004330576.1 331694337 10362266 complement(497949..498788) 1 NC_015312.1 PFAM: Rhodanese-like; KEGG: ami:Amir_6828 rhodanese domain protein; SMART: Rhodanese-like; thiosulfate sulfurtransferase 498788 10362266 Psed_0455 Pseudonocardia dioxanivorans CB1190 thiosulfate sulfurtransferase YP_004330576.1 497949 R 675635 CDS YP_004330577.1 331694338 10362267 complement(498785..499297) 1 NC_015312.1 KEGG: svi:Svir_37700 hypothetical protein; hypothetical protein 499297 10362267 Psed_0456 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330577.1 498785 R 675635 CDS YP_004330578.1 331694339 10362268 complement(499551..499985) 1 NC_015312.1 KEGG: amd:AMED_9010 thioredoxin; thioredoxin 499985 10362268 Psed_0457 Pseudonocardia dioxanivorans CB1190 thioredoxin YP_004330578.1 499551 R 675635 CDS YP_004330579.1 331694340 10362269 complement(500036..500839) 1 NC_015312.1 KEGG: ami:Amir_6825 hypothetical protein; hypothetical protein 500839 10362269 Psed_0458 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330579.1 500036 R 675635 CDS YP_004330580.1 331694341 10362270 501108..501866 1 NC_015312.1 KEGG: ami:Amir_6823 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 501866 10362270 Psed_0459 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004330580.1 501108 D 675635 CDS YP_004330581.1 331694342 10362271 501915..502817 1 NC_015312.1 KEGG: mil:ML5_2774 mycothiol biosynthesis acetyltransferase; TIGRFAM: Mycothiol biosynthesis protein, MshD; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; mycothiol biosynthesis acetyltransferase 502817 10362271 Psed_0460 Pseudonocardia dioxanivorans CB1190 mycothiol biosynthesis acetyltransferase YP_004330581.1 501915 D 675635 CDS YP_004330582.1 331694343 10362272 503033..504154 1 NC_015312.1 KEGG: ami:Amir_6821 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1; phosphate ABC transporter substrate-binding protein 504154 10362272 Psed_0461 Pseudonocardia dioxanivorans CB1190 phosphate ABC transporter substrate-binding protein YP_004330582.1 503033 D 675635 CDS YP_004330583.1 331694344 10362273 504195..505265 1 NC_015312.1 KEGG: ami:Amir_6820 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 505265 10362273 Psed_0462 Pseudonocardia dioxanivorans CB1190 phosphate ABC transporter permease YP_004330583.1 504195 D 675635 CDS YP_004330584.1 331694345 10362274 505300..506211 1 NC_015312.1 KEGG: ami:Amir_6819 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 506211 10362274 Psed_0463 Pseudonocardia dioxanivorans CB1190 phosphate ABC transporter permease YP_004330584.1 505300 D 675635 CDS YP_004330585.1 331694346 10362275 506225..507001 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease 1; KEGG: msp:Mspyr1_10410 phosphate ABC transporter ATP-binding protein, PhoT family; PFAM: ABC transporter-like; phosphate ABC transporter ATPase 507001 10362275 Psed_0464 Pseudonocardia dioxanivorans CB1190 phosphate ABC transporter ATPase YP_004330585.1 506225 D 675635 CDS YP_004330586.1 331694347 10362276 complement(507034..507690) 1 NC_015312.1 KEGG: amd:AMED_9002 phosphate transport system protein; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU 507690 10362276 Psed_0465 Pseudonocardia dioxanivorans CB1190 phosphate uptake regulator PhoU YP_004330586.1 507034 R 675635 CDS YP_004330587.1 331694348 10362277 complement(507787..507996) 1 NC_015312.1 PFAM: Dodecin flavoprotein; KEGG: scb:SCAB_11251 hypothetical protein; hypothetical protein 507996 10362277 Psed_0466 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330587.1 507787 R 675635 CDS YP_004330588.1 331694349 10362278 complement(508025..508681) 1 NC_015312.1 KEGG: amd:AMED_9002 phosphate transport system protein; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU 508681 10362278 Psed_0467 Pseudonocardia dioxanivorans CB1190 phosphate uptake regulator PhoU YP_004330588.1 508025 R 675635 CDS YP_004330589.1 331694350 10362279 complement(508783..511143) 1 NC_015312.1 KEGG: sen:SACE_7090 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 511143 10362279 Psed_0468 Pseudonocardia dioxanivorans CB1190 cell envelope-related transcriptional attenuator YP_004330589.1 508783 R 675635 CDS YP_004330590.1 331694351 10362280 complement(511287..512147) 1 NC_015312.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: sen:SACE_7088 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 512147 10362280 Psed_0469 Pseudonocardia dioxanivorans CB1190 diguanylate cyclase YP_004330590.1 511287 R 675635 CDS YP_004330591.1 331694352 10362281 complement(512281..513456) 1 NC_015312.1 KEGG: sen:SACE_7086 dihydrouridine synthase TIM-barrel protein nifR3; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nifR3 family TIM-barrel protein 513456 10362281 Psed_0470 Pseudonocardia dioxanivorans CB1190 nifR3 family TIM-barrel protein YP_004330591.1 512281 R 675635 CDS YP_004330592.1 331694353 10362282 complement(513476..514063) 1 NC_015312.1 KEGG: svi:Svir_37580 hypothetical protein; hypothetical protein 514063 10362282 Psed_0471 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330592.1 513476 R 675635 CDS YP_004330593.1 331694354 10362283 514193..514510 1 NC_015312.1 KEGG: tfu:Tfu_1551 hypothetical protein; hypothetical protein 514510 10362283 Psed_0472 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330593.1 514193 D 675635 CDS YP_004330594.1 331694355 10362284 514830..515498 1 NC_015312.1 hypothetical protein 515498 10362284 Psed_0473 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330594.1 514830 D 675635 CDS YP_004330595.1 331694356 10362286 complement(516658..517959) 1 NC_015312.1 PFAM: Endoribonuclease L-PSP; KEGG: lhk:LHK_01898 endoribonuclease L-PSP; endoribonuclease L-PSP 517959 10362286 Psed_0475 Pseudonocardia dioxanivorans CB1190 endoribonuclease L-PSP YP_004330595.1 516658 R 675635 CDS YP_004330596.1 331694357 10362287 518157..518543 1 NC_015312.1 KEGG: sen:SACE_0961 suppressor protein DnaK; suppressor protein DnaK 518543 10362287 Psed_0476 Pseudonocardia dioxanivorans CB1190 suppressor protein DnaK YP_004330596.1 518157 D 675635 CDS YP_004330597.1 331694358 10362288 518760..520193 1 NC_015312.1 manually curated; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; KEGG: sgr:SGR_2706 transcriptional regulator; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 520193 10362288 Psed_0477 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004330597.1 518760 D 675635 CDS YP_004330598.1 331694359 10362289 520360..521601 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: pol:Bpro_4134 major facilitator transporter; major facilitator superfamily protein 521601 10362289 Psed_0478 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330598.1 520360 D 675635 CDS YP_004330599.1 331694360 10362290 521621..522205 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: msm:MSMEG_4136 dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase 522205 10362290 Psed_0479 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004330599.1 521621 D 675635 CDS YP_004330600.1 331694361 10362293 523020..524351 1 NC_015312.1 PFAM: General substrate transporter; KEGG: rha:RHA1_ro06087 major facilitator transporter; general substrate transporter 524351 10362293 Psed_0481 Pseudonocardia dioxanivorans CB1190 general substrate transporter YP_004330600.1 523020 D 675635 CDS YP_004330601.1 331694362 10362294 complement(524383..525096) 1 NC_015312.1 PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: amd:AMED_0557 integral membrane protein; phosphoesterase PA-phosphatase-like protein 525096 10362294 Psed_0482 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004330601.1 524383 R 675635 CDS YP_004330602.1 331694363 10362295 525218..525535 1 NC_015312.1 KEGG: mjl:Mjls_3508 hypothetical protein; hypothetical protein 525535 10362295 Psed_0483 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330602.1 525218 D 675635 CDS YP_004330603.1 331694364 10362296 525678..526568 1 NC_015312.1 PFAM: Abortive infection protein; KEGG: xce:Xcel_2718 abortive infection protein; abortive infection protein 526568 10362296 Psed_0484 Pseudonocardia dioxanivorans CB1190 abortive infection protein YP_004330603.1 525678 D 675635 CDS YP_004330604.1 331694365 10362297 complement(526575..526967) 1 NC_015312.1 KEGG: req:REQ_44380 hypothetical protein; hypothetical protein 526967 10362297 Psed_0485 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330604.1 526575 R 675635 CDS YP_004330605.1 331694366 10362298 complement(527012..527638) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fri:FraEuI1c_3546 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 527638 10362298 Psed_0486 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004330605.1 527012 R 675635 CDS YP_004330606.1 331694367 10362299 complement(527716..527898) 1 NC_015312.1 hypothetical protein 527898 10362299 Psed_0487 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330606.1 527716 R 675635 CDS YP_004330607.1 331694368 10362300 complement(527933..529543) 1 NC_015312.1 KEGG: nda:Ndas_5034 cyclohexanone monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclohexanone monooxygenase 529543 10362300 Psed_0488 Pseudonocardia dioxanivorans CB1190 cyclohexanone monooxygenase YP_004330607.1 527933 R 675635 CDS YP_004330608.1 331694369 10362301 complement(529622..530530) 1 NC_015312.1 KEGG: pol:Bpro_5566 alpha/beta hydrolase fold-3; alpha/beta hydrolase 530530 10362301 Psed_0489 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004330608.1 529622 R 675635 CDS YP_004330609.1 331694370 10362302 530716..532443 1 NC_015312.1 PFAM: Helix-turn-helix, Fis-type; RNA polymerase sigma factor 54, interaction; KEGG: rha:RHA1_ro00452 transcriptional regulator; Fis family transcriptional regulator 532443 10362302 Psed_0490 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004330609.1 530716 D 675635 CDS YP_004330610.1 331694371 10362306 complement(533514..534506) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: cwo:Cwoe_1096 alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 534506 10362306 Psed_0493 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004330610.1 533514 R 675635 CDS YP_004330611.1 331694372 10362307 complement(534689..535879) 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: amd:AMED_4704 cytochrome P450; cytochrome P450 535879 10362307 Psed_0494 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004330611.1 534689 R 675635 CDS YP_004330612.1 331694373 10362308 535977..537056 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_3550 transcriptional regulator, TetR family; TetR family transcriptional regulator 537056 10362308 Psed_0495 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330612.1 535977 D 675635 CDS YP_004330613.1 331694374 10362309 complement(537283..538416) 1 NC_015312.1 KEGG: ttr:Tter_1915 hypothetical protein; hypothetical protein 538416 10362309 Psed_0496 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330613.1 537283 R 675635 CDS YP_004330614.1 331694375 10362310 complement(538525..539277) 1 NC_015312.1 KEGG: rsa:RSal33209_1050 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 539277 10362310 Psed_0497 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004330614.1 538525 R 675635 CDS YP_004330615.1 331694376 10362311 complement(539292..540356) 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 540356 10362311 Psed_0498 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004330615.1 539292 R 675635 CDS YP_004330616.1 331694377 10362312 540714..542360 1 NC_015312.1 KEGG: nca:Noca_4137 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 542360 10362312 Psed_0499 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004330616.1 540714 D 675635 CDS YP_004330617.1 331694378 10362313 complement(542464..543378) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nca:Noca_4120 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 543378 10362313 Psed_0500 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004330617.1 542464 R 675635 CDS YP_004330618.1 331694379 10362314 complement(543402..543776) 1 NC_015312.1 KEGG: nca:Noca_4119 hypothetical protein; hypothetical protein 543776 10362314 Psed_0501 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330618.1 543402 R 675635 CDS YP_004330619.1 331694380 10362315 543847..544101 1 NC_015312.1 PFAM: Biotin/lipoyl attachment; KEGG: fre:Franean1_0965 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 544101 10362315 Psed_0502 Pseudonocardia dioxanivorans CB1190 biotin/lipoyl attachment domain-containing protein YP_004330619.1 543847 D 675635 CDS YP_004330620.1 331694381 10362316 544098..544895 1 NC_015312.1 PFAM: Crotonase, core; KEGG: nca:Noca_4110 short chain enoyl-CoA hydratase; enoyl-CoA hydratase 544895 10362316 Psed_0503 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004330620.1 544098 D 675635 CDS YP_004330621.1 331694382 10362317 544892..545335 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: nca:Noca_4135 dehydratase; acyl dehydratase MaoC 545335 10362317 Psed_0504 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004330621.1 544892 D 675635 CDS YP_004330622.1 331694383 10362318 545332..546408 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: nca:Noca_4129 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 546408 10362318 Psed_0505 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004330622.1 545332 D 675635 CDS YP_004330623.1 331694384 10362319 546570..547460 1 NC_015312.1 KEGG: ade:Adeh_3688 response regulator receiver domain-containing protein; hypothetical protein 547460 10362319 Psed_0506 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330623.1 546570 D 675635 CDS YP_004330624.1 331694385 10362320 complement(547533..548189) 1 NC_015312.1 KEGG: gob:Gobs_3775 TetR family transcriptional regulator; manually curated; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator 548189 10362320 Psed_0507 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330624.1 547533 R 675635 CDS YP_004330625.1 331694386 10362321 548383..549603 1 NC_015312.1 PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: nca:Noca_4118 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; 3-ketoacyl-ACP synthase II 549603 10362321 Psed_0508 Pseudonocardia dioxanivorans CB1190 3-ketoacyl-ACP synthase II YP_004330625.1 548383 D 675635 CDS YP_004330626.1 331694387 10362322 549815..550996 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: nca:Noca_4117 extracellular ligand-binding receptor; ABC transporter substrate-binding protein 550996 10362322 Psed_0509 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004330626.1 549815 D 675635 CDS YP_004330627.1 331694388 10362323 551071..552603 1 NC_015312.1 KEGG: nca:Noca_4116 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 552603 10362323 Psed_0510 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004330627.1 551071 D 675635 CDS YP_004330628.1 331694389 10362324 552607..553470 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: nca:Noca_4115 inner-membrane translocator; ABC transporter permease 553470 10362324 Psed_0511 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004330628.1 552607 D 675635 CDS YP_004330629.1 331694390 10362325 553488..554504 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: nca:Noca_4114 inner-membrane translocator; ABC transporter permease 554504 10362325 Psed_0512 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004330629.1 553488 D 675635 CDS YP_004330630.1 331694391 10362326 554501..555250 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: nca:Noca_4113 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 555250 10362326 Psed_0513 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004330630.1 554501 D 675635 CDS YP_004330631.1 331694392 10362327 555247..555966 1 NC_015312.1 KEGG: nca:Noca_4112 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 555966 10362327 Psed_0514 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330631.1 555247 D 675635 CDS YP_004330632.1 331694393 10362328 complement(555975..557111) 1 NC_015312.1 manually curated; KEGG: ami:Amir_5665 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase 557111 10362328 Psed_0515 Pseudonocardia dioxanivorans CB1190 alpha-methylacyl-CoA racemase YP_004330632.1 555975 R 675635 CDS YP_004330633.1 331694394 10362329 557210..557977 1 NC_015312.1 PFAM: Crotonase, core; KEGG: nca:Noca_4107 enoyl-CoA hydratase; enoyl-CoA hydratase 557977 10362329 Psed_0516 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004330633.1 557210 D 675635 CDS YP_004330634.1 331694395 10362330 557974..559371 1 NC_015312.1 KEGG: ace:Acel_0874 propionyl-CoA carboxylase; PFAM: Carboxyl transferase; propionyl-CoA carboxylase 559371 10362330 Psed_0517 Pseudonocardia dioxanivorans CB1190 propionyl-CoA carboxylase YP_004330634.1 557974 D 675635 CDS YP_004330635.1 331694396 10362331 559368..560012 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nca:Noca_4111 regulatory protein, TetR; TetR family transcriptional regulator 560012 10362331 Psed_0518 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330635.1 559368 D 675635 CDS YP_004330636.1 331694397 10362332 560009..561259 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: nca:Noca_4134 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 561259 10362332 Psed_0519 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004330636.1 560009 D 675635 CDS YP_004330637.1 331694398 10362333 561256..562089 1 NC_015312.1 KEGG: nca:Noca_4133 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 562089 10362333 Psed_0520 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004330637.1 561256 D 675635 CDS YP_004330638.1 331694399 10362334 562107..562523 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: nca:Noca_4132 hypothetical protein; hypothetical protein 562523 10362334 Psed_0521 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330638.1 562107 D 675635 CDS YP_004330639.1 331694400 10362335 562520..563671 1 NC_015312.1 KEGG: nca:Noca_4131 lipid-transfer protein; propanoyl-CoA C-acyltransferase 563671 10362335 Psed_0522 Pseudonocardia dioxanivorans CB1190 propanoyl-CoA C-acyltransferase YP_004330639.1 562520 D 675635 CDS YP_004330640.1 331694401 10362336 563683..564981 1 NC_015312.1 KEGG: nca:Noca_4130 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; (R)-benzylsuccinyl-CoA dehydrogenase 564981 10362336 Psed_0523 Pseudonocardia dioxanivorans CB1190 (R)-benzylsuccinyl-CoA dehydrogenase YP_004330640.1 563683 D 675635 CDS YP_004330641.1 331694402 10362337 564993..566099 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: fri:FraEuI1c_5059 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 566099 10362337 Psed_0524 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004330641.1 564993 D 675635 CDS YP_004330642.1 331694403 10362338 complement(566152..568437) 1 NC_015312.1 KEGG: scb:SCAB_6041 SecDF protein-export membrane protein; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; SecF protein; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecD 568437 10362338 Psed_0525 Pseudonocardia dioxanivorans CB1190 protein-export membrane protein SecD YP_004330642.1 566152 R 675635 CDS YP_004330643.1 331694404 10362339 complement(568495..568857) 1 NC_015312.1 hypothetical protein 568857 10362339 Psed_0526 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330643.1 568495 R 675635 CDS YP_004330644.1 331694405 10362340 569280..570593 1 NC_015312.1 KEGG: acd:AOLE_11755 hypothetical protein; hypothetical protein 570593 10362340 Psed_0527 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330644.1 569280 D 675635 CDS YP_004330645.1 331694406 10362341 complement(570663..571265) 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: nca:Noca_4462 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 571265 10362341 Psed_0528 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004330645.1 570663 R 675635 CDS YP_004330646.1 331694407 10362342 complement(571324..571788) 1 NC_015312.1 hypothetical protein 571788 10362342 Psed_0529 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330646.1 571324 R 675635 CDS YP_004330647.1 331694408 10362343 571984..572319 1 NC_015312.1 KEGG: amd:AMED_5389 hypothetical protein; hypothetical protein 572319 10362343 Psed_0530 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330647.1 571984 D 675635 CDS YP_004330648.1 331694409 10362344 572476..572715 1 NC_015312.1 KEGG: pmb:A9601_05461 G3E family GTPase; G3E family GTPase 572715 10362344 Psed_0531 Pseudonocardia dioxanivorans CB1190 G3E family GTPase YP_004330648.1 572476 D 675635 CDS YP_004330649.1 331694410 10362345 complement(572838..573491) 1 NC_015312.1 PFAM: Cation efflux protein; KEGG: mil:ML5_5458 cation efflux protein; cation efflux protein 573491 10362345 Psed_0532 Pseudonocardia dioxanivorans CB1190 cation efflux protein YP_004330649.1 572838 R 675635 CDS YP_004330650.1 331694411 10362346 complement(573488..573895) 1 NC_015312.1 KEGG: stp:Strop_1675 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 573895 10362346 Psed_0533 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004330650.1 573488 R 675635 CDS YP_004330651.1 331694412 10362347 573902..575026 1 NC_015312.1 PFAM: Alanine racemase, N-terminal; KEGG: aau:AAur_0212 alanine racemase N-terminal domain-containing protein; alanine racemase 575026 10362347 Psed_0534 Pseudonocardia dioxanivorans CB1190 alanine racemase YP_004330651.1 573902 D 675635 CDS YP_004330652.1 331694413 10362348 complement(575067..575747) 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0272; KEGG: fri:FraEuI1c_0110 protein of unknown function DUF111; hypothetical protein 575747 10362348 Psed_0535 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330652.1 575067 R 675635 CDS YP_004330653.1 331694414 10362349 complement(575828..576136) 1 NC_015312.1 KEGG: mxa:MXAN_4234 hypothetical protein; hypothetical protein 576136 10362349 Psed_0536 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330653.1 575828 R 675635 CDS YP_004330654.1 331694415 10362350 576374..577120 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: apb:SAR116_0795 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 577120 10362350 Psed_0537 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004330654.1 576374 D 675635 CDS YP_004330655.1 331694416 10362354 complement(583070..584176) 1 NC_015312.1 PFAM: Dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase, class 2; KEGG: tfu:Tfu_0927 dihydroorotate dehydrogenase 2; dihydroorotate dehydrogenase 584176 10362354 Psed_0538 Pseudonocardia dioxanivorans CB1190 dihydroorotate dehydrogenase YP_004330655.1 583070 R 675635 CDS YP_004330656.1 331694417 10362355 complement(584213..584584) 1 NC_015312.1 KEGG: tfu:Tfu_1642 RNA-binding S4; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein 584584 10362355 Psed_0539 Pseudonocardia dioxanivorans CB1190 RNA-binding S4 domain-containing protein YP_004330656.1 584213 R 675635 CDS YP_004330657.1 331694418 10362356 complement(584602..585399) 1 NC_015312.1 KEGG: rha:RHA1_ro01770 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 585399 10362356 Psed_0540 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004330657.1 584602 R 675635 CDS YP_004330658.1 331694419 10362357 complement(585401..585736) 1 NC_015312.1 KEGG: aac:Aaci_0812 ethyl tert-butyl ether degradation EthD; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 585736 10362357 Psed_0541 Pseudonocardia dioxanivorans CB1190 ethyl tert-butyl ether degradation EthD YP_004330658.1 585401 R 675635 CDS YP_004330659.1 331694420 10362358 585803..587302 1 NC_015312.1 KEGG: sen:SACE_3387 bile acid-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 587302 10362358 Psed_0542 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004330659.1 585803 D 675635 CDS YP_004330660.1 331694421 10362359 587299..587961 1 NC_015312.1 PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: reu:Reut_B4781 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 587961 10362359 Psed_0543 Pseudonocardia dioxanivorans CB1190 dimethylmenaquinone methyltransferase YP_004330660.1 587299 D 675635 CDS YP_004330661.1 331694422 10362360 complement(588066..590009) 1 NC_015312.1 TIGRFAM: Glycoside hydrolase, family 77; KEGG: mgi:Mflv_0996 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; 4-alpha-glucanotransferase 590009 10362360 Psed_0544 Pseudonocardia dioxanivorans CB1190 4-alpha-glucanotransferase YP_004330661.1 588066 R 675635 CDS YP_004330662.1 331694423 10362361 590233..593448 1 NC_015312.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: lma:LmjF35.0540 proteophosphoglycan 5; Cna B domain-containing protein 593448 10362361 Psed_0545 Pseudonocardia dioxanivorans CB1190 Cna B domain-containing protein YP_004330662.1 590233 D 675635 CDS YP_004330663.1 331694424 10362362 593445..594290 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: req:REQ_42200 alpha/beta hydrolase; alpha/beta hydrolase 594290 10362362 Psed_0546 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004330663.1 593445 D 675635 CDS YP_004330664.1 331694425 10362363 complement(594294..594983) 1 NC_015312.1 PFAM: Acetoacetate decarboxylase; KEGG: sro:Sros_1360 hypothetical protein; acetoacetate decarboxylase 594983 10362363 Psed_0547 Pseudonocardia dioxanivorans CB1190 acetoacetate decarboxylase YP_004330664.1 594294 R 675635 CDS YP_004330665.1 331694426 10362364 595142..599347 1 NC_015312.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; PAS fold-3; GAF; ATPase-like, ATP-binding domain; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: gob:Gobs_0116 multi-sensor signal transduction histidine kinase; SMART: Protein phosphatase 2C-like; Signal transduction response regulator, receiver domain; PAC motif; GAF; PAS/PAC sensor protein 599347 10362364 Psed_0548 Pseudonocardia dioxanivorans CB1190 PAS/PAC sensor protein YP_004330665.1 595142 D 675635 CDS YP_004330666.1 331694427 10362365 599568..600095 1 NC_015312.1 PFAM: Cysteine dioxygenase type I; KEGG: nda:Ndas_1387 cysteine dioxygenase type I; cysteine dioxygenase type I 600095 10362365 Psed_0549 Pseudonocardia dioxanivorans CB1190 cysteine dioxygenase type I YP_004330666.1 599568 D 675635 CDS YP_004330667.1 331694428 10362366 600092..600469 1 NC_015312.1 SMART: Rhodanese-like; KEGG: gob:Gobs_4874 rhodanese domain-containing protein; rhodanese-like protein 600469 10362366 Psed_0550 Pseudonocardia dioxanivorans CB1190 rhodanese-like protein YP_004330667.1 600092 D 675635 CDS YP_004330668.1 331694429 10362367 complement(600462..601652) 1 NC_015312.1 KEGG: gob:Gobs_2382 glutaryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; glutaryl-CoA dehydrogenase 601652 10362367 Psed_0551 Pseudonocardia dioxanivorans CB1190 glutaryl-CoA dehydrogenase YP_004330668.1 600462 R 675635 CDS YP_004330669.1 331694430 10362368 601714..602412 1 NC_015312.1 KEGG: cai:Caci_7507 protein of unknown function DUF1275; manually curated; PFAM: Protein of unknown function DUF1275; hypothetical protein 602412 10362368 Psed_0552 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330669.1 601714 D 675635 CDS YP_004330670.1 331694431 10362369 complement(602458..606699) 1 NC_015312.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605; KEGG: svi:Svir_13420 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal; ATP-dependent helicase HrpA 606699 10362369 Psed_0553 Pseudonocardia dioxanivorans CB1190 ATP-dependent helicase HrpA YP_004330670.1 602458 R 675635 CDS YP_004330671.1 331694432 10362370 complement(606729..606989) 1 NC_015312.1 KEGG: gob:Gobs_2136 hypothetical protein; hypothetical protein 606989 10362370 Psed_0554 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330671.1 606729 R 675635 CDS YP_004330672.1 331694433 10362371 complement(607359..607862) 1 NC_015312.1 KEGG: ago:AGOS_ACL074W hypothetical protein; hypothetical protein 607862 10362371 Psed_0555 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330672.1 607359 R 675635 CDS YP_004330673.1 331694434 10362372 complement(608016..608840) 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: amd:AMED_2723 beta-lactamase class C; beta-lactamase 608840 10362372 Psed_0556 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004330673.1 608016 R 675635 CDS YP_004330674.1 331694435 10362373 608858..609760 1 NC_015312.1 PFAM: Protein of unknown function DUF72; KEGG: sen:SACE_3121 hypothetical protein; hypothetical protein 609760 10362373 Psed_0557 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330674.1 608858 D 675635 CDS YP_004330675.1 331694436 10362374 complement(609753..610940) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mau:Micau_0410 major facilitator superfamily protein; major facilitator superfamily protein 610940 10362374 Psed_0558 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330675.1 609753 R 675635 CDS YP_004330676.1 331694437 10362375 complement(611023..612627) 1 NC_015312.1 KEGG: rha:RHA1_ro10402 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 612627 10362375 Psed_0559 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004330676.1 611023 R 675635 CDS YP_004330677.1 331694438 10362376 complement(612706..612909) 1 NC_015312.1 KEGG: nda:Ndas_0433 protein of unknown function DUF1271; hypothetical protein 612909 10362376 Psed_0560 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330677.1 612706 R 675635 CDS YP_004330678.1 331694439 10362377 complement(613009..613230) 1 NC_015312.1 hypothetical protein 613230 10362377 Psed_0561 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330678.1 613009 R 675635 CDS YP_004330679.1 331694440 10362378 complement(613378..615267) 1 NC_015312.1 KEGG: nml:Namu_2393 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; acetate--CoA ligase 615267 10362378 Psed_0562 Pseudonocardia dioxanivorans CB1190 acetate--CoA ligase YP_004330679.1 613378 R 675635 CDS YP_004330680.1 331694441 10362379 615547..616887 1 NC_015312.1 PFAM: Lipase, GDSL; KEGG: bxe:Bxe_A0297 lipase/acylhydrolase; G-D-S-L family lipolytic protein 616887 10362379 Psed_0563 Pseudonocardia dioxanivorans CB1190 G-D-S-L family lipolytic protein YP_004330680.1 615547 D 675635 CDS YP_004330681.1 331694442 10362380 complement(617197..617658) 1 NC_015312.1 KEGG: svi:Svir_37150 hypothetical protein; hypothetical protein 617658 10362380 Psed_0564 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330681.1 617197 R 675635 CDS YP_004330682.1 331694443 10362381 complement(617696..617917) 1 NC_015312.1 PFAM: Heavy metal transport/detoxification protein; KEGG: gbr:Gbro_4238 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 617917 10362381 Psed_0565 Pseudonocardia dioxanivorans CB1190 heavy metal transport/detoxification protein YP_004330682.1 617696 R 675635 CDS YP_004330683.1 331694444 10362382 complement(617984..618265) 1 NC_015312.1 PFAM: Protein of unknown function DUF156; KEGG: amd:AMED_6896 hypothetical protein; hypothetical protein 618265 10362382 Psed_0566 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330683.1 617984 R 675635 CDS YP_004330684.1 331694445 10362383 618560..618793 1 NC_015312.1 KEGG: ami:Amir_6795 hypothetical protein; hypothetical protein 618793 10362383 Psed_0567 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330684.1 618560 D 675635 CDS YP_004330685.1 331694446 10362387 complement(619449..621002) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_4676 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein 621002 10362387 Psed_0568 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004330685.1 619449 R 675635 CDS YP_004330686.1 331694447 10362388 complement(620999..621619) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_4675 TetR family transcriptional regulator; TetR family transcriptional regulator 621619 10362388 Psed_0569 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330686.1 620999 R 675635 CDS YP_004330687.1 331694448 10362389 622067..622471 1 NC_015312.1 KEGG: cai:Caci_0444 ricin B lectin; ricin B lectin 622471 10362389 Psed_0570 Pseudonocardia dioxanivorans CB1190 ricin B lectin YP_004330687.1 622067 D 675635 CDS YP_004330688.1 331694449 10362390 complement(622511..625210) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; Glycosyl transferase, family 2; KEGG: sco:SCO4554 bi-functional transferase/deacetylase; polysaccharide deacetylase 625210 10362390 Psed_0571 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004330688.1 622511 R 675635 CDS YP_004330689.1 331694450 10362391 complement(625207..625740) 1 NC_015312.1 KEGG: scb:SCAB_55801 hypothetical protein; hypothetical protein 625740 10362391 Psed_0572 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330689.1 625207 R 675635 CDS YP_004330690.1 331694451 10362392 complement(625737..626738) 1 NC_015312.1 KEGG: sna:Snas_4397 hydrolase transmembrane protein; hydrolase transmembrane protein 626738 10362392 Psed_0573 Pseudonocardia dioxanivorans CB1190 hydrolase transmembrane protein YP_004330690.1 625737 R 675635 CDS YP_004330691.1 331694452 10362393 complement(627067..629274) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; Glycosyl transferase, family 2; KEGG: svi:Svir_26930 glycosyl transferase; polysaccharide deacetylase 629274 10362393 Psed_0574 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004330691.1 627067 R 675635 CDS YP_004330692.1 331694453 10362394 complement(629271..630128) 1 NC_015312.1 KEGG: vcn:VOLCADRAFT_104860 hypothetical protein; hypothetical protein 630128 10362394 Psed_0575 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330692.1 629271 R 675635 CDS YP_004330693.1 331694454 10362395 630659..631267 1 NC_015312.1 KEGG: cai:Caci_0444 ricin B lectin; hypothetical protein 631267 10362395 Psed_0576 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330693.1 630659 D 675635 CDS YP_004330694.1 331694455 10362396 complement(631329..631817) 1 NC_015312.1 KEGG: sen:SACE_1607 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 631817 10362396 Psed_0577 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004330694.1 631329 R 675635 CDS YP_004330695.1 331694456 10362397 631872..632393 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: sro:Sros_8205 hypothetical protein; cupin 632393 10362397 Psed_0578 Pseudonocardia dioxanivorans CB1190 cupin YP_004330695.1 631872 D 675635 CDS YP_004330696.1 331694457 10362398 632425..633042 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nml:Namu_2350 TetR family transcriptional regulator; TetR family transcriptional regulator 633042 10362398 Psed_0579 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330696.1 632425 D 675635 CDS YP_004330697.1 331694458 10362399 complement(633287..634027) 1 NC_015312.1 KEGG: bmj:BMULJ_03470 highly repetitive protein; highly repetitive protein 634027 10362399 Psed_0580 Pseudonocardia dioxanivorans CB1190 highly repetitive protein YP_004330697.1 633287 R 675635 CDS YP_004330698.1 331694459 10362400 634636..634839 1 NC_015312.1 KEGG: tcu:Tcur_2880 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 634839 10362400 Psed_0581 Pseudonocardia dioxanivorans CB1190 cold-shock DNA-binding domain-containing protein YP_004330698.1 634636 D 675635 CDS YP_004330699.1 331694460 10362401 635243..635770 1 NC_015312.1 KEGG: amd:AMED_8800 hypothetical protein; hypothetical protein 635770 10362401 Psed_0582 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330699.1 635243 D 675635 CDS YP_004330700.1 331694461 10362402 636039..637385 1 NC_015312.1 PFAM: Protein of unknown function DUF445, transmembrane; KEGG: ami:Amir_6776 protein of unknown function DUF445; hypothetical protein 637385 10362402 Psed_0583 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330700.1 636039 D 675635 CDS YP_004330701.1 331694462 10362403 637671..638687 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: amd:AMED_5929 ATPase component of ABC-type multidrug transport system; PFAM: ABC transporter-like; daunorubicin resistance ABC transporter ATPase subunit 638687 10362403 Psed_0584 Pseudonocardia dioxanivorans CB1190 daunorubicin resistance ABC transporter ATPase subunit YP_004330701.1 637671 D 675635 CDS YP_004330702.1 331694463 10362404 638684..639487 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: amd:AMED_5930 ABC-2 type transporter; ABC transporter 639487 10362404 Psed_0585 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330702.1 638684 D 675635 CDS YP_004330703.1 331694464 10362405 complement(639513..639881) 1 NC_015312.1 TIGRFAM: Camphor resistance CrcB protein; HAMAP: Camphor resistance CrcB protein; KEGG: scb:SCAB_83531 integral membrane protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein 639881 10362405 Psed_0586 Pseudonocardia dioxanivorans CB1190 CrcB-like protein YP_004330703.1 639513 R 675635 CDS YP_004330704.1 331694465 10362406 complement(639878..640366) 1 NC_015312.1 TIGRFAM: Camphor resistance CrcB protein; HAMAP: Camphor resistance CrcB protein; KEGG: fri:FraEuI1c_4222 CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein 640366 10362406 Psed_0587 Pseudonocardia dioxanivorans CB1190 CrcB-like protein YP_004330704.1 639878 R 675635 CDS YP_004330705.1 331694466 10362407 640527..640976 1 NC_015312.1 KEGG: sen:SACE_6990 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 640976 10362407 Psed_0588 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004330705.1 640527 D 675635 CDS YP_004330706.1 331694467 10362408 640982..641782 1 NC_015312.1 KEGG: amd:AMED_0427 membrane spanning protein; hypothetical protein 641782 10362408 Psed_0589 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330706.1 640982 D 675635 CDS YP_004330707.1 331694468 10362409 641940..642293 1 NC_015312.1 PFAM: Protein of unknown function DUF2516; KEGG: sen:SACE_6988 hypothetical protein; hypothetical protein 642293 10362409 Psed_0590 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330707.1 641940 D 675635 CDS YP_004330708.1 331694469 10362410 642290..642847 1 NC_015312.1 PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: ami:Amir_6768 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 642847 10362410 Psed_0591 Pseudonocardia dioxanivorans CB1190 prolyl-tRNA synthetase YP_004330708.1 642290 D 675635 CDS YP_004330709.1 331694470 10362411 642937..645252 1 NC_015312.1 SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: mau:Micau_3432 ATP-dependent protease La; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal; anti-sigma H sporulation factor LonB 645252 10362411 Psed_0592 Pseudonocardia dioxanivorans CB1190 anti-sigma H sporulation factor LonB YP_004330709.1 642937 D 675635 CDS YP_004330710.1 331694471 10362412 complement(645414..646355) 1 NC_015312.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: amd:AMED_0445 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase 646355 10362412 Psed_0593 Pseudonocardia dioxanivorans CB1190 formyltetrahydrofolate deformylase YP_004330710.1 645414 R 675635 CDS YP_004330711.1 331694472 10362413 646439..647614 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: dat:HRM2_33900 permease of the major facilitator superfamily; major facilitator superfamily protein 647614 10362413 Psed_0594 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330711.1 646439 D 675635 CDS YP_004330712.1 331694473 10362414 complement(647583..648089) 1 NC_015312.1 PFAM: Protein of unknown function DUF2505; KEGG: sen:SACE_6979 hypothetical protein; hypothetical protein 648089 10362414 Psed_0595 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330712.1 647583 R 675635 CDS YP_004330713.1 331694474 10362415 648114..649193 1 NC_015312.1 KEGG: ami:Amir_6761 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; UDP-N-acetylenolpyruvoylglucosamine reductase 649193 10362415 Psed_0596 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004330713.1 648114 D 675635 CDS YP_004330714.1 331694475 10362416 649335..650522 1 NC_015312.1 PFAM: YkuD domain; KEGG: nfa:nfa51960 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 650522 10362416 Psed_0597 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004330714.1 649335 D 675635 CDS YP_004330715.1 331694476 10362417 complement(650548..651564) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: ach:Achl_2099 alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 651564 10362417 Psed_0598 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004330715.1 650548 R 675635 CDS YP_004330716.1 331694477 10362418 complement(651566..652312) 1 NC_015312.1 KEGG: ami:Amir_6759 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; serine 3-dehydrogenase 652312 10362418 Psed_0599 Pseudonocardia dioxanivorans CB1190 serine 3-dehydrogenase YP_004330716.1 651566 R 675635 CDS YP_004330717.1 331694478 10362419 complement(652349..652639) 1 NC_015312.1 PFAM: Protein of unknown function DUF2530; KEGG: ami:Amir_0487 hypothetical protein; hypothetical protein 652639 10362419 Psed_0600 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330717.1 652349 R 675635 CDS YP_004330718.1 331694479 10362420 652676..654232 1 NC_015312.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: amd:AMED_8482 MFS transporter, xanthine/uracil permease; xanthine/uracil/vitamin C permease 654232 10362420 Psed_0601 Pseudonocardia dioxanivorans CB1190 xanthine/uracil/vitamin C permease YP_004330718.1 652676 D 675635 CDS YP_004330719.1 331694480 10362421 654312..655628 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_0490 major facilitator superfamily MFS_1; major facilitator superfamily protein 655628 10362421 Psed_0602 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330719.1 654312 D 675635 CDS YP_004330720.1 331694481 10362422 complement(655724..656470) 1 NC_015312.1 KEGG: kfl:Kfla_2555 hypothetical protein; hypothetical protein 656470 10362422 Psed_0603 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330720.1 655724 R 675635 CDS YP_004330721.1 331694482 10362423 656482..657618 1 NC_015312.1 KEGG: ade:Adeh_0244 LigA; hypothetical protein 657618 10362423 Psed_0604 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330721.1 656482 D 675635 CDS YP_004330722.1 331694483 10362424 complement(657561..659069) 1 NC_015312.1 KEGG: amd:AMED_8474 hypothetical protein; hypothetical protein 659069 10362424 Psed_0605 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330722.1 657561 R 675635 CDS YP_004330723.1 331694484 10362426 660273..660845 1 NC_015312.1 KEGG: amd:AMED_8472 hypothetical protein; hypothetical protein 660845 10362426 Psed_0607 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330723.1 660273 D 675635 CDS YP_004330724.1 331694485 10362427 complement(660855..662309) 1 NC_015312.1 KEGG: sen:SACE_0629 hypothetical protein; hypothetical protein 662309 10362427 Psed_0608 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330724.1 660855 R 675635 CDS YP_004330725.1 331694486 10362428 complement(662598..663731) 1 NC_015312.1 PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase, Mycobacterial-type; HAMAP: Phosphoserine aminotransferase; KEGG: msp:Mspyr1_11040 phosphoserine aminotransferase; phosphoserine aminotransferase 663731 10362428 Psed_0609 Pseudonocardia dioxanivorans CB1190 phosphoserine aminotransferase YP_004330725.1 662598 R 675635 CDS YP_004330726.1 331694487 10362429 complement(663920..665092) 1 NC_015312.1 KEGG: amd:AMED_8451 citrate synthase; PFAM: Citrate synthase-like; citrate (Si)-synthase 665092 10362429 Psed_0610 Pseudonocardia dioxanivorans CB1190 citrate (Si)-synthase YP_004330726.1 663920 R 675635 CDS YP_004330727.1 331694488 10362430 665365..666024 1 NC_015312.1 PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: amd:AMED_8441 pyridoxamine 5'-phosphate oxidase; pyridoxine/pyridoxamine 5'-phosphate oxidase 666024 10362430 Psed_0611 Pseudonocardia dioxanivorans CB1190 pyridoxine/pyridoxamine 5'-phosphate oxidase YP_004330727.1 665365 D 675635 CDS YP_004330728.1 331694489 10362431 666122..667615 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_0642 major facilitator superfamily multidrug resistance protein; major facilitator superfamily protein 667615 10362431 Psed_0612 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330728.1 666122 D 675635 CDS YP_004330729.1 331694490 10362432 667721..669025 1 NC_015312.1 TIGRFAM: Citrate synthase, type II; KEGG: svi:Svir_33600 citrate synthase; PFAM: Citrate synthase-like; citrate synthase I 669025 10362432 Psed_0613 Pseudonocardia dioxanivorans CB1190 citrate synthase I YP_004330729.1 667721 D 675635 CDS YP_004330730.1 331694491 10362433 669131..670519 1 NC_015312.1 KEGG: rer:RER_45790 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; deoxyribodipyrimidine photo-lyase 670519 10362433 Psed_0614 Pseudonocardia dioxanivorans CB1190 deoxyribodipyrimidine photo-lyase YP_004330730.1 669131 D 675635 CDS YP_004330731.1 331694492 10362434 670574..671947 1 NC_015312.1 KEGG: mgm:Mmc1_2162 TPR repeat-containing protein; hypothetical protein 671947 10362434 Psed_0615 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330731.1 670574 D 675635 CDS YP_004330732.1 331694493 10362435 complement(672287..672931) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sgr:SGR_3980 TetR family transcriptional regulator; TetR family transcriptional regulator 672931 10362435 Psed_0616 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330732.1 672287 R 675635 CDS YP_004330733.1 331694494 10362436 672984..674543 1 NC_015312.1 KEGG: cai:Caci_5384 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 674543 10362436 Psed_0617 Pseudonocardia dioxanivorans CB1190 pentachlorophenol monooxygenase YP_004330733.1 672984 D 675635 CDS YP_004330734.1 331694495 10362437 complement(674540..675727) 1 NC_015312.1 KEGG: ami:Amir_0532 ABC-type Na+ efflux pump permease component; Na+ efflux pump ABC transporter permease 675727 10362437 Psed_0618 Pseudonocardia dioxanivorans CB1190 Na+ efflux pump ABC transporter permease YP_004330734.1 674540 R 675635 CDS YP_004330735.1 331694496 10362438 complement(675724..676626) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: amd:AMED_2105 ABC transport system ATP-binding protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 676626 10362438 Psed_0619 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004330735.1 675724 R 675635 CDS YP_004330736.1 331694497 10362439 complement(676671..677414) 1 NC_015312.1 KEGG: tfu:Tfu_1277 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 677414 10362439 Psed_0620 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004330736.1 676671 R 675635 CDS YP_004330737.1 331694498 10362440 complement(677431..679392) 1 NC_015312.1 KEGG: has:Halsa_0700 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, 4TM/12TM fusion protein 679392 10362440 Psed_0621 Pseudonocardia dioxanivorans CB1190 TRAP transporter, 4TM/12TM fusion protein YP_004330737.1 677431 R 675635 CDS YP_004330738.1 331694499 10362441 complement(679389..680201) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: pol:Bpro_1857 3-oxoadipate enol-lactonase; alpha/beta hydrolase 680201 10362441 Psed_0622 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004330738.1 679389 R 675635 CDS YP_004330739.1 331694500 10362442 complement(680188..681681) 1 NC_015312.1 KEGG: rop:ROP_29740 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 681681 10362442 Psed_0623 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004330739.1 680188 R 675635 CDS YP_004330740.1 331694501 10362443 complement(681678..682745) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: bts:Btus_1633 luciferase-like, subgroup; luciferase-like protein 682745 10362443 Psed_0624 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004330740.1 681678 R 675635 CDS YP_004330741.1 331694502 10362444 complement(682760..683761) 1 NC_015312.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: hje:HacjB3_10950 hypothetical protein; TRAP transporter solute receptor, TAXI family 683761 10362444 Psed_0625 Pseudonocardia dioxanivorans CB1190 TRAP transporter solute receptor, TAXI family YP_004330741.1 682760 R 675635 CDS YP_004330742.1 331694503 10362445 complement(683879..684283) 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: amd:AMED_3868 hypothetical protein; hypothetical protein 684283 10362445 Psed_0626 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330742.1 683879 R 675635 CDS YP_004330743.1 331694504 10362446 complement(684280..685458) 1 NC_015312.1 KEGG: bts:Btus_1262 thiolase; thiolase 685458 10362446 Psed_0627 Pseudonocardia dioxanivorans CB1190 thiolase YP_004330743.1 684280 R 675635 CDS YP_004330744.1 331694505 10362447 complement(685729..687639) 1 NC_015312.1 PFAM: Helix-turn-helix, Fis-type; GAF; KEGG: amd:AMED_4322 Fis family transcriptional regulator; Fis family transcriptional regulator 687639 10362447 Psed_0628 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004330744.1 685729 R 675635 CDS YP_004330745.1 331694506 10362448 687992..689644 1 NC_015312.1 KEGG: amd:AMED_4324 methane monooxygenase; PFAM: Methane/phenol/toluene hydroxylase; methane monooxygenase 689644 10362448 Psed_0629 Pseudonocardia dioxanivorans CB1190 methane monooxygenase YP_004330745.1 687992 D 675635 CDS YP_004330746.1 331694507 10362449 689747..690802 1 NC_015312.1 KEGG: amd:AMED_4325 CDP-6-deoxy-delta-3,4-glucoseen reductase; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; ferredoxin--NAD(+) reductase 690802 10362449 Psed_0630 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004330746.1 689747 D 675635 CDS YP_004330747.1 331694508 10362450 690799..691986 1 NC_015312.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: amd:AMED_4326 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 691986 10362450 Psed_0631 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004330747.1 690799 D 675635 CDS YP_004330748.1 331694509 10362451 691983..692360 1 NC_015312.1 PFAM: Monooxygenase component MmoB/DmpM; KEGG: amd:AMED_4327 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 692360 10362451 Psed_0632 Pseudonocardia dioxanivorans CB1190 monooxygenase component MmoB/DmpM YP_004330748.1 691983 D 675635 CDS YP_004330749.1 331694510 10362452 692489..694174 1 NC_015312.1 KEGG: amd:AMED_4331 chaperonin GroEL; TIGRFAM: Chaperonin Cpn60; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 694174 10362452 Psed_0633 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroEL YP_004330749.1 692489 D 675635 CDS YP_004330750.1 331694511 10362453 694268..695410 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: sen:SACE_6395 amidohydrolase 2; amidohydrolase 695410 10362453 Psed_0634 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004330750.1 694268 D 675635 CDS YP_004330751.1 331694512 10362454 695558..696973 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sna:Snas_0952 general substrate transporter; major facilitator superfamily protein 696973 10362454 Psed_0635 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330751.1 695558 D 675635 CDS YP_004330752.1 331694513 10362455 complement(697001..697699) 1 NC_015312.1 KEGG: ami:Amir_0553 AIG2 family protein; AIG2 family protein 697699 10362455 Psed_0636 Pseudonocardia dioxanivorans CB1190 AIG2 family protein YP_004330752.1 697001 R 675635 CDS YP_004330753.1 331694514 10362456 697723..698691 1 NC_015312.1 TIGRFAM: translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; KEGG: cai:Caci_3517 translation initiation factor, aIF-2BI family; PFAM: Initiation factor 2B-related; translation initiation factor, aIF-2BI family 698691 10362456 Psed_0637 Pseudonocardia dioxanivorans CB1190 translation initiation factor, aIF-2BI family YP_004330753.1 697723 D 675635 CDS YP_004330754.1 331694515 10362457 698688..699836 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nda:Ndas_0293 major facilitator superfamily MFS_1; major facilitator superfamily protein 699836 10362457 Psed_0638 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330754.1 698688 D 675635 CDS YP_004330755.1 331694516 10362458 699915..700286 1 NC_015312.1 hypothetical protein 700286 10362458 Psed_0639 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330755.1 699915 D 675635 CDS YP_004330756.1 331694517 10362459 complement(700334..700960) 1 NC_015312.1 KEGG: svi:Svir_18790 Zn-dependent hydrolase, glyoxylase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 700960 10362459 Psed_0640 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004330756.1 700334 R 675635 CDS YP_004330757.1 331694518 10362460 complement(700960..702045) 1 NC_015312.1 SMART: Polyketide synthase, enoylreductase; TIGRFAM: Formaldehyde dehydrogenase, mycothiol-dependent; KEGG: mil:ML5_5136 mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; mycothiol-dependent formaldehyde dehydrogenase 702045 10362460 Psed_0641 Pseudonocardia dioxanivorans CB1190 mycothiol-dependent formaldehyde dehydrogenase YP_004330757.1 700960 R 675635 CDS YP_004330758.1 331694519 10362461 702173..702925 1 NC_015312.1 PFAM: Crotonase, core; KEGG: rha:RHA1_ro10427 enoyl-CoA hydratase; enoyl-CoA hydratase 702925 10362461 Psed_0642 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004330758.1 702173 D 675635 CDS YP_004330759.1 331694520 10362462 703125..704288 1 NC_015312.1 KEGG: nda:Ndas_1870 fumarylacetoacetase; PFAM: Fumarylacetoacetase, C-terminal-like; Fumarylacetoacetase 704288 10362462 Psed_0643 Pseudonocardia dioxanivorans CB1190 Fumarylacetoacetase YP_004330759.1 703125 D 675635 CDS YP_004330760.1 331694521 10362463 complement(704325..704744) 1 NC_015312.1 PFAM: Thioesterase superfamily; KEGG: mjl:Mjls_2763 thioesterase superfamily protein; thioesterase 704744 10362463 Psed_0644 Pseudonocardia dioxanivorans CB1190 thioesterase YP_004330760.1 704325 R 675635 CDS YP_004330761.1 331694522 10362464 complement(704741..705064) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: kfl:Kfla_0197 cupin 2 conserved barrel domain protein; cupin 705064 10362464 Psed_0645 Pseudonocardia dioxanivorans CB1190 cupin YP_004330761.1 704741 R 675635 CDS YP_004330762.1 331694523 10362465 705162..705404 1 NC_015312.1 hypothetical protein 705404 10362465 Psed_0646 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330762.1 705162 D 675635 CDS YP_004330763.1 331694524 10362466 complement(705522..706313) 1 NC_015312.1 KEGG: tcu:Tcur_1157 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 706313 10362466 Psed_0647 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004330763.1 705522 R 675635 CDS YP_004330764.1 331694525 10362467 706423..707643 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: nca:Noca_4563 acetyl-CoA acetyltransferases; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase 707643 10362467 Psed_0648 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004330764.1 706423 D 675635 CDS YP_004330765.1 331694526 10362468 707645..709807 1 NC_015312.1 KEGG: sma:SAV_1680 fatty acid oxidation complex alpha-subunit; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxybutyryl-CoA epimerase 709807 10362468 Psed_0649 Pseudonocardia dioxanivorans CB1190 3-hydroxybutyryl-CoA epimerase YP_004330765.1 707645 D 675635 CDS YP_004330766.1 331694527 10362469 complement(709924..711030) 1 NC_015312.1 TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase, predicted; KEGG: sgr:SGR_459 carboxylate-amine ligase; PFAM: Glutamate--cysteine ligase, GCS2; carboxylate-amine ligase ybdK 711030 10362469 Psed_0650 Pseudonocardia dioxanivorans CB1190 carboxylate-amine ligase ybdK YP_004330766.1 709924 R 675635 CDS YP_004330767.1 331694528 10362470 711117..711890 1 NC_015312.1 KEGG: sen:SACE_1903 response regulator receiver/ANTAR domain-containing protein; PFAM: ANTAR; SMART: GAF; ANTAR domain-containing protein 711890 10362470 Psed_0651 Pseudonocardia dioxanivorans CB1190 ANTAR domain-containing protein YP_004330767.1 711117 D 675635 CDS YP_004330768.1 331694529 10362471 complement(711838..713145) 1 NC_015312.1 KEGG: amd:AMED_1255 hypothetical protein; hypothetical protein 713145 10362471 Psed_0652 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330768.1 711838 R 675635 CDS YP_004330769.1 331694530 10362472 713336..713626 1 NC_015312.1 KEGG: gob:Gobs_0179 stress responsive alpha-beta barrel domain-containing protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; stress responsive alpha-beta barrel domain-containing protein 713626 10362472 Psed_0653 Pseudonocardia dioxanivorans CB1190 stress responsive alpha-beta barrel domain-containing protein YP_004330769.1 713336 D 675635 CDS YP_004330770.1 331694531 10362473 713693..714601 1 NC_015312.1 KEGG: ami:Amir_2133 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 714601 10362473 Psed_0654 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330770.1 713693 D 675635 CDS YP_004330771.1 331694532 10362474 714598..715257 1 NC_015312.1 KEGG: ami:Amir_2134 hypothetical protein; hypothetical protein 715257 10362474 Psed_0655 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330771.1 714598 D 675635 CDS YP_004330772.1 331694533 10362475 complement(715264..715956) 1 NC_015312.1 KEGG: amd:AMED_6611 hypothetical protein; hypothetical protein 715956 10362475 Psed_0656 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330772.1 715264 R 675635 CDS YP_004330773.1 331694534 10362476 complement(715956..716936) 1 NC_015312.1 PFAM: Protein of unknown function DUF318, transmembrane; KEGG: sen:SACE_1496 permease; hypothetical protein 716936 10362476 Psed_0657 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330773.1 715956 R 675635 CDS YP_004330774.1 331694535 10362477 complement(717009..717569) 1 NC_015312.1 KEGG: tfu:Tfu_1924 hypothetical protein; hypothetical protein 717569 10362477 Psed_0658 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330774.1 717009 R 675635 CDS YP_004330775.1 331694536 10362478 717624..718196 1 NC_015312.1 KEGG: sro:Sros_0898 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; ECF subfamily RNA polymerase sigma-24 subunit 718196 10362478 Psed_0659 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330775.1 717624 D 675635 CDS YP_004330776.1 331694537 10362479 718193..718843 1 NC_015312.1 PFAM: Anti-sigma K factor RskA; KEGG: ace:Acel_0058 transmembrane anti-sigma factor; anti-sigma-K factor RskA 718843 10362479 Psed_0660 Pseudonocardia dioxanivorans CB1190 anti-sigma-K factor RskA YP_004330776.1 718193 D 675635 CDS YP_004330777.1 331694538 10362480 complement(718920..720032) 1 NC_015312.1 KEGG: nfa:nfa11970 dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES 720032 10362480 Psed_0661 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroES YP_004330777.1 718920 R 675635 CDS YP_004330778.1 331694539 10362481 720220..720876 1 NC_015312.1 KEGG: nml:Namu_4774 hypothetical protein; hypothetical protein 720876 10362481 Psed_0662 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330778.1 720220 D 675635 CDS YP_004330779.1 331694540 10362482 complement(720922..722262) 1 NC_015312.1 PFAM: General substrate transporter; KEGG: rxy:Rxyl_1587 major facilitator transporter; general substrate transporter 722262 10362482 Psed_0663 Pseudonocardia dioxanivorans CB1190 general substrate transporter YP_004330779.1 720922 R 675635 CDS YP_004330780.1 331694541 10362483 complement(722259..723266) 1 NC_015312.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: atu:Atu1400 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 723266 10362483 Psed_0664 Pseudonocardia dioxanivorans CB1190 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004330780.1 722259 R 675635 CDS YP_004330781.1 331694542 10362484 complement(723263..724405) 1 NC_015312.1 KEGG: bmj:BMULJ_05466 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase 724405 10362484 Psed_0665 Pseudonocardia dioxanivorans CB1190 maleylacetate reductase YP_004330781.1 723263 R 675635 CDS YP_004330782.1 331694543 10362485 complement(724402..725598) 1 NC_015312.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: mlo:mll7085 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; galactonate dehydratase 725598 10362485 Psed_0666 Pseudonocardia dioxanivorans CB1190 galactonate dehydratase YP_004330782.1 724402 R 675635 CDS YP_004330783.1 331694544 10362486 725719..726609 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: smd:Smed_6318 LysR family transcriptional regulator; LysR family transcriptional regulator 726609 10362486 Psed_0667 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004330783.1 725719 D 675635 CDS YP_004330784.1 331694545 10362487 complement(726672..726956) 1 NC_015312.1 KEGG: nml:Namu_3919 hypothetical protein; hypothetical protein 726956 10362487 Psed_0668 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330784.1 726672 R 675635 CDS YP_004330785.1 331694546 10362488 complement(727053..728003) 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: nml:Namu_5292 hypothetical protein; hypothetical protein 728003 10362488 Psed_0669 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330785.1 727053 R 675635 CDS YP_004330786.1 331694547 10362489 complement(728000..728986) 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: rer:RER_47080 hypothetical protein; hypothetical protein 728986 10362489 Psed_0670 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330786.1 728000 R 675635 CDS YP_004330787.1 331694548 10362490 complement(729144..729581) 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0066; KEGG: amd:AMED_7744 hypothetical protein; hypothetical protein 729581 10362490 Psed_0671 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330787.1 729144 R 675635 CDS YP_004330788.1 331694549 10362491 729660..730064 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH02714 glyoxalase/bleomycin resistance-like protein; glyoxalase/bleomycin resistance protein/dioxygenase 730064 10362491 Psed_0672 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004330788.1 729660 D 675635 CDS YP_004330789.1 331694550 10362492 730133..730327 1 NC_015312.1 hypothetical protein 730327 10362492 Psed_0673 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330789.1 730133 D 675635 CDS YP_004330790.1 331694551 10362493 730600..731610 1 NC_015312.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; KEGG: azo:azo2612 GAF/GGDEF-domain-containing protein; SMART: Diguanylate cyclase, predicted; GAF; GAF sensor-containing diguanylate cyclase 731610 10362493 Psed_0674 Pseudonocardia dioxanivorans CB1190 GAF sensor-containing diguanylate cyclase YP_004330790.1 730600 D 675635 CDS YP_004330791.1 331694552 10362494 complement(731618..732343) 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: nfa:nfa24980 transcriptional regulator; HxlR family transcriptional regulator 732343 10362494 Psed_0675 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004330791.1 731618 R 675635 CDS YP_004330792.1 331694553 10362495 732415..733533 1 NC_015312.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: pzu:PHZ_c3106 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 733533 10362495 Psed_0676 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004330792.1 732415 D 675635 CDS YP_004330793.1 331694554 10362496 complement(733538..734071) 1 NC_015312.1 PFAM: Protein of unknown function DUF664; KEGG: kfl:Kfla_2986 protein of unknown function DUF664; hypothetical protein 734071 10362496 Psed_0677 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330793.1 733538 R 675635 CDS YP_004330794.1 331694555 10362497 complement(734206..734385) 1 NC_015312.1 KEGG: mav:MAV_0775 zinc transporter Slc39a7; zinc transporter Slc39a7 734385 10362497 Psed_0678 Pseudonocardia dioxanivorans CB1190 zinc transporter Slc39a7 YP_004330794.1 734206 R 675635 CDS YP_004330795.1 331694556 10362498 734633..735484 1 NC_015312.1 KEGG: mau:Micau_2627 hypothetical protein; hypothetical protein 735484 10362498 Psed_0679 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330795.1 734633 D 675635 CDS YP_004330796.1 331694557 10362499 complement(735528..735968) 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: rha:RHA1_ro01404 hypothetical protein; HxlR family transcriptional regulator 735968 10362499 Psed_0680 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004330796.1 735528 R 675635 CDS YP_004330797.1 331694558 10362500 736079..736624 1 NC_015312.1 KEGG: fal:FRAAL2803 hypothetical protein; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; carbonic anhydrase 736624 10362500 Psed_0681 Pseudonocardia dioxanivorans CB1190 carbonic anhydrase YP_004330797.1 736079 D 675635 CDS YP_004330798.1 331694559 10362501 736814..737833 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease 737833 10362501 Psed_0682 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004330798.1 736814 D 675635 CDS YP_004330799.1 331694560 10362502 737907..739085 1 NC_015312.1 KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein 739085 10362502 Psed_0683 Pseudonocardia dioxanivorans CB1190 sugar ABC transporter substrate-binding protein YP_004330799.1 737907 D 675635 CDS YP_004330800.1 331694561 10362503 739111..739893 1 NC_015312.1 KEGG: amd:AMED_0066 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 739893 10362503 Psed_0684 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004330800.1 739111 D 675635 CDS YP_004330801.1 331694562 10362504 739890..741401 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_5697 ABC transporter related protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 741401 10362504 Psed_0685 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004330801.1 739890 D 675635 CDS YP_004330802.1 331694563 10362505 741488..742924 1 NC_015312.1 KEGG: ctc:CTC01781 phenylhydantoinase; PFAM: Amidohydrolase 1; dihydropyrimidinase 742924 10362505 Psed_0686 Pseudonocardia dioxanivorans CB1190 dihydropyrimidinase YP_004330802.1 741488 D 675635 CDS YP_004330803.1 331694564 10362506 742924..743931 1 NC_015312.1 PFAM: Asparaginase/glutaminase; KEGG: rxy:Rxyl_2741 asparaginase; SMART: Asparaginase/glutaminase; asparaginase 743931 10362506 Psed_0687 Pseudonocardia dioxanivorans CB1190 asparaginase YP_004330803.1 742924 D 675635 CDS YP_004330804.1 331694565 10362507 743956..745095 1 NC_015312.1 KEGG: mil:ML5_3221 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 745095 10362507 Psed_0688 Pseudonocardia dioxanivorans CB1190 3-isopropylmalate dehydrogenase YP_004330804.1 743956 D 675635 CDS YP_004330805.1 331694566 10362508 complement(745239..746456) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: msm:MSMEG_2810 major facilitator superfamily protein; major facilitator superfamily protein 746456 10362508 Psed_0689 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004330805.1 745239 R 675635 CDS YP_004330806.1 331694567 10362509 746662..747954 1 NC_015312.1 PFAM: Peptidase M23; KEGG: scb:SCAB_47131 peptidase; peptidase M23 747954 10362509 Psed_0690 Pseudonocardia dioxanivorans CB1190 peptidase M23 YP_004330806.1 746662 D 675635 CDS YP_004330807.1 331694568 10362510 748004..748543 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: mtb:TBMG_01108 hypothetical protein; hypothetical protein 748543 10362510 Psed_0691 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330807.1 748004 D 675635 CDS YP_004330808.1 331694569 10362511 complement(748530..748850) 1 NC_015312.1 hypothetical protein 748850 10362511 Psed_0692 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330808.1 748530 R 675635 CDS YP_004330809.1 331694570 10362512 complement(749058..749357) 1 NC_015312.1 hypothetical protein 749357 10362512 Psed_0693 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330809.1 749058 R 675635 CDS YP_004330810.1 331694571 10362513 complement(749712..750629) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msm:MSMEG_1985 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 750629 10362513 Psed_0694 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004330810.1 749712 R 675635 CDS YP_004330811.1 331694572 10362514 750746..751816 1 NC_015312.1 TIGRFAM: Tartrate dehydrogenase; KEGG: msm:MSMEG_1986 tartrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 751816 10362514 Psed_0695 Pseudonocardia dioxanivorans CB1190 tartrate dehydrogenase YP_004330811.1 750746 D 675635 CDS YP_004330812.1 331694573 10362515 751953..752234 1 NC_015312.1 KEGG: vcn:VOLCADRAFT_89522 hypothetical protein; hypothetical protein 752234 10362515 Psed_0696 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330812.1 751953 D 675635 CDS YP_004330813.1 331694574 10362516 752429..753136 1 NC_015312.1 KEGG: pmx:PERMA_1659 flavin reductase domain protein, FMN-binding; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 753136 10362516 Psed_0697 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004330813.1 752429 D 675635 CDS YP_004330814.1 331694575 10362517 753268..753675 1 NC_015312.1 PFAM: YCII-related; KEGG: cai:Caci_4747 YCII-related protein; hypothetical protein 753675 10362517 Psed_0698 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330814.1 753268 D 675635 CDS YP_004330815.1 331694576 10362518 753672..754823 1 NC_015312.1 KEGG: cai:Caci_4746 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 754823 10362518 Psed_0699 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330815.1 753672 D 675635 CDS YP_004330816.1 331694577 10362519 754863..757109 1 NC_015312.1 KEGG: rxy:Rxyl_2946 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 757109 10362519 Psed_0700 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004330816.1 754863 D 675635 CDS YP_004330817.1 331694578 10362520 757166..758722 1 NC_015312.1 manually curated; KEGG: amd:AMED_5441 FAD-dependent oxidoreductase; PFAM: Monooxygenase, FAD-binding; 2,4-dichlorophenol 6-monooxygenase 758722 10362520 Psed_0701 Pseudonocardia dioxanivorans CB1190 2,4-dichlorophenol 6-monooxygenase YP_004330817.1 757166 D 675635 CDS YP_004330818.1 331694579 10362521 complement(758828..759850) 1 NC_015312.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: scb:SCAB_61641 adenosine/AMP deaminase; adenosine deaminase 759850 10362521 Psed_0702 Pseudonocardia dioxanivorans CB1190 adenosine deaminase YP_004330818.1 758828 R 675635 CDS YP_004330819.1 331694580 10362522 complement(759943..762012) 1 NC_015312.1 PFAM: Membrane transport protein, MMPL type; KEGG: svi:Svir_37330 predicted RND superfamily drug exporter; MMPL domain-containing protein 762012 10362522 Psed_0703 Pseudonocardia dioxanivorans CB1190 MMPL domain-containing protein YP_004330819.1 759943 R 675635 CDS YP_004330820.1 331694581 10362523 complement(762251..763510) 1 NC_015312.1 KEGG: mil:ML5_0800 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; SMART: Protein phosphatase 2C-like; GAF sensor-containing protein serine/threonine phosphatase 763510 10362523 Psed_0704 Pseudonocardia dioxanivorans CB1190 GAF sensor-containing protein serine/threonine phosphatase YP_004330820.1 762251 R 675635 CDS YP_004330821.1 331694582 10362524 763668..764552 1 NC_015312.1 PFAM: UspA; KEGG: req:REQ_23940 universal stress family protein; UspA domain-containing protein 764552 10362524 Psed_0705 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004330821.1 763668 D 675635 CDS YP_004330822.1 331694583 10362525 764549..764902 1 NC_015312.1 KEGG: gob:Gobs_1336 hypothetical protein; hypothetical protein 764902 10362525 Psed_0706 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330822.1 764549 D 675635 CDS YP_004330823.1 331694584 10362526 765030..765959 1 NC_015312.1 PFAM: UspA; KEGG: cef:CE2791 hypothetical protein; UspA domain-containing protein 765959 10362526 Psed_0707 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004330823.1 765030 D 675635 CDS YP_004330824.1 331694585 10362527 766129..766743 1 NC_015312.1 KEGG: sen:SACE_2402 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing membrane protein 766743 10362527 Psed_0708 Pseudonocardia dioxanivorans CB1190 CBS domain-containing membrane protein YP_004330824.1 766129 D 675635 CDS YP_004330825.1 331694586 10362528 complement(766856..767707) 1 NC_015312.1 PFAM: UspA; KEGG: sro:Sros_5439 universal stress protein UspA and related nucleotide-binding protein-like protein; UspA domain-containing protein 767707 10362528 Psed_0709 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004330825.1 766856 R 675635 CDS YP_004330826.1 331694587 10362529 complement(767925..768470) 1 NC_015312.1 PFAM: Flavodoxin/nitric oxide synthase; KEGG: fra:Francci3_1002 hypothetical protein; flavodoxin/nitric oxide synthase 768470 10362529 Psed_0710 Pseudonocardia dioxanivorans CB1190 flavodoxin/nitric oxide synthase YP_004330826.1 767925 R 675635 CDS YP_004330827.1 331694588 10362530 768750..769343 1 NC_015312.1 KEGG: sma:SAV_1301 hypothetical protein; hypothetical protein 769343 10362530 Psed_0711 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330827.1 768750 D 675635 CDS YP_004330828.1 331694589 10362531 complement(769352..770329) 1 NC_015312.1 KEGG: ami:Amir_1917 nitroreductase; nitroreductase 770329 10362531 Psed_0712 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004330828.1 769352 R 675635 CDS YP_004330829.1 331694590 10362532 complement(770386..771294) 1 NC_015312.1 PFAM: UspA; KEGG: amd:AMED_5483 universal stress protein; UspA domain-containing protein 771294 10362532 Psed_0713 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004330829.1 770386 R 675635 CDS YP_004330830.1 331694591 10362533 complement(771417..772415) 1 NC_015312.1 KEGG: ami:Amir_1906 nitroreductase; nitroreductase 772415 10362533 Psed_0714 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004330830.1 771417 R 675635 CDS YP_004330831.1 331694592 10362534 772589..774232 1 NC_015312.1 KEGG: ami:Amir_1907 GAF sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; GAF; SMART: GAF; ATPase-like, ATP-binding domain; GAF sensor signal transduction histidine kinase 774232 10362534 Psed_0715 Pseudonocardia dioxanivorans CB1190 GAF sensor signal transduction histidine kinase YP_004330831.1 772589 D 675635 CDS YP_004330832.1 331694593 10362535 774295..775209 1 NC_015312.1 PFAM: UspA; KEGG: sen:SACE_2425 universal stress protein; UspA domain-containing protein 775209 10362535 Psed_0716 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004330832.1 774295 D 675635 CDS YP_004330833.1 331694594 10362536 775206..776051 1 NC_015312.1 PFAM: UspA; KEGG: sro:Sros_3526 hypothetical protein; UspA domain-containing protein 776051 10362536 Psed_0717 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004330833.1 775206 D 675635 CDS YP_004330834.1 331694595 10362537 complement(776089..776733) 1 NC_015312.1 KEGG: ami:Amir_6098 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 776733 10362537 Psed_0718 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004330834.1 776089 R 675635 CDS YP_004330835.1 331694596 10362538 776882..777475 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fri:FraEuI1c_4013 regulatory protein TetR; TetR family transcriptional regulator 777475 10362538 Psed_0719 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330835.1 776882 D 675635 CDS YP_004330836.1 331694597 10362539 777475..778146 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: fri:FraEuI1c_4014 protein of unknown function DUF1503; hypothetical protein 778146 10362539 Psed_0720 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330836.1 777475 D 675635 CDS YP_004330837.1 331694598 10362540 complement(778280..778642) 1 NC_015312.1 KEGG: sen:SACE_6553 hypothetical protein; hypothetical protein 778642 10362540 Psed_0721 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330837.1 778280 R 675635 CDS YP_004330838.1 331694599 10362542 complement(778924..779901) 1 NC_015312.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: amd:AMED_1631 purine nucleosidase; inosine/uridine-preferring nucleoside hydrolase 779901 10362542 Psed_0723 Pseudonocardia dioxanivorans CB1190 inosine/uridine-preferring nucleoside hydrolase YP_004330838.1 778924 R 675635 CDS YP_004330839.1 331694600 10362544 complement(780600..781535) 1 NC_015312.1 KEGG: rop:ROP_47630 acid phosphatase; acid phosphatase 781535 10362544 Psed_0725 Pseudonocardia dioxanivorans CB1190 acid phosphatase YP_004330839.1 780600 R 675635 CDS YP_004330840.1 331694601 10362545 complement(781620..782528) 1 NC_015312.1 KEGG: svi:Svir_26230 hypothetical protein; manually curated; PFAM: Sulphatase-modifying factor; sulfatase-modifying factor protein 782528 10362545 Psed_0726 Pseudonocardia dioxanivorans CB1190 sulfatase-modifying factor protein YP_004330840.1 781620 R 675635 CDS YP_004330841.1 331694602 10362546 782789..785164 1 NC_015312.1 PFAM: Sulfatase; KEGG: rop:ROP_36660 arylsulfatase; sulfatase 785164 10362546 Psed_0727 Pseudonocardia dioxanivorans CB1190 sulfatase YP_004330841.1 782789 D 675635 CDS YP_004330842.1 331694603 10362547 complement(785232..786122) 1 NC_015312.1 KEGG: gob:Gobs_3031 diacylglycerol kinase catalytic subunit; PFAM: Diacylglycerol kinase, catalytic domain; SMART: Diacylglycerol kinase, catalytic domain; diacylglycerol kinase catalytic subunit 786122 10362547 Psed_0728 Pseudonocardia dioxanivorans CB1190 diacylglycerol kinase catalytic subunit YP_004330842.1 785232 R 675635 CDS YP_004330843.1 331694604 10362548 786353..787663 1 NC_015312.1 KEGG: xau:Xaut_2680 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; acyl-CoA dehydrogenase 787663 10362548 Psed_0729 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004330843.1 786353 D 675635 CDS YP_004330844.1 331694605 10362549 787749..788195 1 NC_015312.1 KEGG: pla:Plav_2689 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 788195 10362549 Psed_0730 Pseudonocardia dioxanivorans CB1190 BadM/Rrf2 family transcriptional regulator YP_004330844.1 787749 D 675635 CDS YP_004330845.1 331694606 10362550 788247..789575 1 NC_015312.1 KEGG: xau:Xaut_2682 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; acyl-CoA dehydrogenase 789575 10362550 Psed_0731 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004330845.1 788247 D 675635 CDS YP_004330846.1 331694607 10362551 789869..791260 1 NC_015312.1 KEGG: msm:MSMEG_3730 helix-turn-helix, fis-type, PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; LytTr DNA-binding protein 791260 10362551 Psed_0732 Pseudonocardia dioxanivorans CB1190 LytTr DNA-binding protein YP_004330846.1 789869 D 675635 CDS YP_004330847.1 331694608 10362552 791493..793688 1 NC_015312.1 PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: fre:Franean1_1533 catalase/peroxidase HPI; catalase-peroxidase 793688 10362552 Psed_0733 Pseudonocardia dioxanivorans CB1190 catalase-peroxidase YP_004330847.1 791493 D 675635 CDS YP_004330848.1 331694609 10362553 793895..794356 1 NC_015312.1 PFAM: Multicopper oxidase, type 3; KEGG: msm:MSMEG_3727 hypothetical protein; multicopper oxidase type 3 794356 10362553 Psed_0734 Pseudonocardia dioxanivorans CB1190 multicopper oxidase type 3 YP_004330848.1 793895 D 675635 CDS YP_004330849.1 331694610 10362554 794371..796059 1 NC_015312.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG: sen:SACE_4449 quinoprotein ethanol dehydrogenase precursor; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; PQQ-dependent dehydrogenase 796059 10362554 Psed_0735 Pseudonocardia dioxanivorans CB1190 PQQ-dependent dehydrogenase YP_004330849.1 794371 D 675635 CDS YP_004330850.1 331694611 10362555 796095..796193 1 NC_015312.1 TIGRFAM: Coenzyme PQQ biosynthesis protein A; PFAM: Coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 796193 10362555 Psed_0736 Pseudonocardia dioxanivorans CB1190 coenzyme PQQ biosynthesis protein A YP_004330850.1 796095 D 675635 CDS YP_004330851.1 331694612 10362556 796256..797149 1 NC_015312.1 TIGRFAM: Coenzyme PQQ biosynthesis protein B; KEGG: gob:Gobs_2453 pyrroloquinoline quinone biosynthesis protein PqqB; coenzyme PQQ biosynthesis protein B 797149 10362556 Psed_0737 Pseudonocardia dioxanivorans CB1190 coenzyme PQQ biosynthesis protein B YP_004330851.1 796256 D 675635 CDS YP_004330852.1 331694613 10362557 797157..797855 1 NC_015312.1 TIGRFAM: Coenzyme PQQ biosynthesis protein C; KEGG: sen:SACE_4446 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; coenzyme PQQ biosynthesis protein C 797855 10362557 Psed_0738 Pseudonocardia dioxanivorans CB1190 coenzyme PQQ biosynthesis protein C YP_004330852.1 797157 D 675635 CDS YP_004330853.1 331694614 10362558 797861..798139 1 NC_015312.1 TIGRFAM: Coenzyme PQQ synthesis D, bacteria; KEGG: msm:MSMEG_3722 bifunctional coenzyme PQQ synthesis protein C/D; coenzyme PQQ biosynthesis protein PqqD 798139 10362558 Psed_0739 Pseudonocardia dioxanivorans CB1190 coenzyme PQQ biosynthesis protein PqqD YP_004330853.1 797861 D 675635 CDS YP_004330854.1 331694615 10362559 798136..799221 1 NC_015312.1 TIGRFAM: Coenzyme PQQ biosynthesis protein E, bacteria; PFAM: Radical SAM; KEGG: gob:Gobs_2456 coenzyme PQQ biosynthesis protein E; SMART: Elongator protein 3/MiaB/NifB; coenzyme PQQ biosynthesis protein E 799221 10362559 Psed_0740 Pseudonocardia dioxanivorans CB1190 coenzyme PQQ biosynthesis protein E YP_004330854.1 798136 D 675635 CDS YP_004330855.1 331694616 10362560 799218..799781 1 NC_015312.1 PFAM: Domain of unknown function DUF204; KEGG: btk:BT9727_5008 integral membrane protein; hypothetical protein 799781 10362560 Psed_0741 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330855.1 799218 D 675635 CDS YP_004330856.1 331694617 10362561 complement(799799..800068) 1 NC_015312.1 KEGG: nml:Namu_1619 ferredoxin; hypothetical protein 800068 10362561 Psed_0742 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330856.1 799799 R 675635 CDS YP_004330857.1 331694618 10362562 complement(800065..801339) 1 NC_015312.1 PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: amd:AMED_5939 respiratory-chain NADH dehydrogenase-related protein; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 801339 10362562 Psed_0743 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004330857.1 800065 R 675635 CDS YP_004330858.1 331694619 10362563 complement(801336..801878) 1 NC_015312.1 PFAM: Flavoprotein transmembrane component; KEGG: amd:AMED_5940 hypothetical protein; ferric reductase 801878 10362563 Psed_0744 Pseudonocardia dioxanivorans CB1190 ferric reductase YP_004330858.1 801336 R 675635 CDS YP_004330859.1 331694620 10362564 complement(801878..802810) 1 NC_015312.1 PFAM: Thiamine synthesis ApbE/UPF0280; KEGG: ami:Amir_1182 ApbE family lipoprotein; ApbE family lipoprotein 802810 10362564 Psed_0745 Pseudonocardia dioxanivorans CB1190 ApbE family lipoprotein YP_004330859.1 801878 R 675635 CDS YP_004330860.1 331694621 10362565 complement(802807..803190) 1 NC_015312.1 hypothetical protein 803190 10362565 Psed_0746 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330860.1 802807 R 675635 CDS YP_004330861.1 331694622 10362566 803236..804060 1 NC_015312.1 KEGG: nml:Namu_0038 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 804060 10362566 Psed_0747 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004330861.1 803236 D 675635 CDS YP_004330862.1 331694623 10362567 804057..805286 1 NC_015312.1 KEGG: ami:Amir_4352 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 805286 10362567 Psed_0748 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004330862.1 804057 D 675635 CDS YP_004330863.1 331694624 10362568 805356..805910 1 NC_015312.1 KEGG: nca:Noca_4421 hypothetical protein; hypothetical protein 805910 10362568 Psed_0749 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330863.1 805356 D 675635 CDS YP_004330864.1 331694625 10362569 complement(806083..806418) 1 NC_015312.1 hypothetical protein 806418 10362569 Psed_0750 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330864.1 806083 R 675635 CDS YP_004330865.1 331694626 10362572 807862..808398 1 NC_015312.1 KEGG: saq:Sare_1642 hypothetical protein; hypothetical protein 808398 10362572 Psed_0753 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330865.1 807862 D 675635 CDS YP_004330866.1 331694627 10362573 808666..808992 1 NC_015312.1 KEGG: scb:SCAB_11001 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 808992 10362573 Psed_0754 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004330866.1 808666 D 675635 CDS YP_004330867.1 331694628 10362574 809018..809503 1 NC_015312.1 PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: nml:Namu_2984 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 809503 10362574 Psed_0755 Pseudonocardia dioxanivorans CB1190 NADH ubiquinone oxidoreductase 20 kDa subunit YP_004330867.1 809018 D 675635 CDS YP_004330868.1 331694629 10362575 809517..811532 1 NC_015312.1 KEGG: nml:Namu_2985 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 811532 10362575 Psed_0756 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004330868.1 809517 D 675635 CDS YP_004330869.1 331694630 10362576 811529..812476 1 NC_015312.1 KEGG: nml:Namu_2986 respiratory-chain NADH dehydrogenase subunit 1; respiratory-chain NADH dehydrogenase subunit 1 812476 10362576 Psed_0757 Pseudonocardia dioxanivorans CB1190 respiratory-chain NADH dehydrogenase subunit 1 YP_004330869.1 811529 D 675635 CDS YP_004330870.1 331694631 10362577 812508..813185 1 NC_015312.1 KEGG: nml:Namu_2987 hypothetical protein; hypothetical protein 813185 10362577 Psed_0758 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330870.1 812508 D 675635 CDS YP_004330871.1 331694632 10362578 813182..814684 1 NC_015312.1 KEGG: nml:Namu_2988 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 814684 10362578 Psed_0759 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004330871.1 813182 D 675635 CDS YP_004330872.1 331694633 10362579 814681..816195 1 NC_015312.1 PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; Nickel-dependent hydrogenase, large subunit; KEGG: nml:Namu_2989 NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 816195 10362579 Psed_0760 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004330872.1 814681 D 675635 CDS YP_004330873.1 331694634 10362580 816327..816719 1 NC_015312.1 KEGG: sen:SACE_3300 hypothetical protein; hypothetical protein 816719 10362580 Psed_0761 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330873.1 816327 D 675635 CDS YP_004330874.1 331694635 10362581 816862..816972 1 NC_015312.1 hypothetical protein 816972 10362581 Psed_0762 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330874.1 816862 D 675635 CDS YP_004330875.1 331694636 10362582 complement(817005..817280) 1 NC_015312.1 TIGRFAM: Muconolactone delta-isomerase; KEGG: rer:RER_54210 muconolactone isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase 817280 10362582 Psed_0763 Pseudonocardia dioxanivorans CB1190 muconolactone delta-isomerase YP_004330875.1 817005 R 675635 CDS YP_004330876.1 331694637 10362583 complement(817382..818230) 1 NC_015312.1 TIGRFAM: Catechol 1,2-dioxygenase, actinobacteria; KEGG: rer:RER_54230 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; catechol 1,2-dioxygenase 818230 10362583 Psed_0764 Pseudonocardia dioxanivorans CB1190 catechol 1,2-dioxygenase YP_004330876.1 817382 R 675635 CDS YP_004330877.1 331694638 10362584 complement(818269..819372) 1 NC_015312.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: gob:Gobs_1295 mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Muconate cycloisomerase 819372 10362584 Psed_0765 Pseudonocardia dioxanivorans CB1190 Muconate cycloisomerase YP_004330877.1 818269 R 675635 CDS YP_004330878.1 331694639 10362585 complement(819398..820450) 1 NC_015312.1 KEGG: tcu:Tcur_0530 oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; phenol 2-monooxygenase 820450 10362585 Psed_0766 Pseudonocardia dioxanivorans CB1190 phenol 2-monooxygenase YP_004330878.1 819398 R 675635 CDS YP_004330879.1 331694640 10362586 complement(820460..820780) 1 NC_015312.1 PFAM: Phenol hydroxylase,conserved region; KEGG: tcu:Tcur_0527 phenol hydroxylase subunit P4; phenol hydroxylase conserved region 820780 10362586 Psed_0767 Pseudonocardia dioxanivorans CB1190 phenol hydroxylase conserved region YP_004330879.1 820460 R 675635 CDS YP_004330880.1 331694641 10362587 complement(820783..822312) 1 NC_015312.1 KEGG: tcu:Tcur_0526 methane/phenol/toluene hydroxylase; PFAM: Methane/phenol/toluene hydroxylase; YHS; phenol 2-monooxygenase 822312 10362587 Psed_0768 Pseudonocardia dioxanivorans CB1190 phenol 2-monooxygenase YP_004330880.1 820783 R 675635 CDS YP_004330881.1 331694642 10362588 complement(822314..822598) 1 NC_015312.1 PFAM: Monooxygenase component MmoB/DmpM; KEGG: tcu:Tcur_0525 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 822598 10362588 Psed_0769 Pseudonocardia dioxanivorans CB1190 monooxygenase component MmoB/DmpM YP_004330881.1 822314 R 675635 CDS YP_004330882.1 331694643 10362589 complement(822595..823542) 1 NC_015312.1 KEGG: tcu:Tcur_0524 phenol 2-monooxygenase; PFAM: Methane/phenol/toluene hydroxylase; phenol 2-monooxygenase 823542 10362589 Psed_0770 Pseudonocardia dioxanivorans CB1190 phenol 2-monooxygenase YP_004330882.1 822595 R 675635 CDS YP_004330883.1 331694644 10362590 complement(823596..823985) 1 NC_015312.1 KEGG: tcu:Tcur_0523 hypothetical protein; hypothetical protein 823985 10362590 Psed_0771 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330883.1 823596 R 675635 CDS YP_004330884.1 331694645 10362591 complement(824145..825059) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msm:MSMEG_1895 HTH-type transcriptional regulator AlsR; LysR family transcriptional regulator 825059 10362591 Psed_0772 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004330884.1 824145 R 675635 CDS YP_004330885.1 331694646 10362592 complement(825143..825601) 1 NC_015312.1 KEGG: rop:ROP_04230 carboxymuconolactone decarboxylase protein; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 825601 10362592 Psed_0773 Pseudonocardia dioxanivorans CB1190 alkylhydroperoxidase YP_004330885.1 825143 R 675635 CDS YP_004330886.1 331694647 10362593 complement(825668..826558) 1 NC_015312.1 KEGG: tcu:Tcur_3211 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 826558 10362593 Psed_0774 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004330886.1 825668 R 675635 CDS YP_004330887.1 331694648 10362596 complement(827742..828407) 1 NC_015312.1 SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: scb:SCAB_6611 3-oxoadipate CoA-transferase subunit; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 828407 10362596 Psed_0777 Pseudonocardia dioxanivorans CB1190 3-oxoacid CoA-transferase subunit B YP_004330887.1 827742 R 675635 CDS YP_004330888.1 331694649 10362597 complement(828404..829081) 1 NC_015312.1 SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: scb:SCAB_6621 3-oxoadipate CoA-transferase subunit A; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 829081 10362597 Psed_0778 Pseudonocardia dioxanivorans CB1190 3-oxoacid CoA-transferase subunit A YP_004330888.1 828404 R 675635 CDS YP_004330889.1 331694650 10362598 complement(829078..830295) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: nca:Noca_1013 acetyl-CoA acetyltransferases; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 830295 10362598 Psed_0779 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004330889.1 829078 R 675635 CDS YP_004330890.1 331694651 10362599 830352..831260 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nca:Noca_1012 LysR family transcriptional regulator; LysR family transcriptional regulator 831260 10362599 Psed_0780 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004330890.1 830352 D 675635 CDS YP_004330891.1 331694652 10362601 complement(831539..833197) 1 NC_015312.1 KEGG: mmi:MMAR_5294 PE-PGRS family protein; PE-PGRS family protein 833197 10362601 Psed_0781 Pseudonocardia dioxanivorans CB1190 PE-PGRS family protein YP_004330891.1 831539 R 675635 CDS YP_004330892.1 331694653 10362602 complement(833372..834028) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: sen:SACE_4341 methyltransferase; type 11 methyltransferase 834028 10362602 Psed_0782 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004330892.1 833372 R 675635 CDS YP_004330893.1 331694654 10362603 complement(834042..835196) 1 NC_015312.1 PFAM: Metallo-dependent phosphatase; KEGG: msp:Mspyr1_42840 phosphohydrolase; metallophosphoesterase 835196 10362603 Psed_0783 Pseudonocardia dioxanivorans CB1190 metallophosphoesterase YP_004330893.1 834042 R 675635 CDS YP_004330894.1 331694655 10362604 835263..836156 1 NC_015312.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: sco:SCO0907 dehydrogenase; 6-phosphogluconate dehydrogenase 836156 10362604 Psed_0784 Pseudonocardia dioxanivorans CB1190 6-phosphogluconate dehydrogenase YP_004330894.1 835263 D 675635 CDS YP_004330895.1 331694656 10362605 836208..836909 1 NC_015312.1 KEGG: sen:SACE_0761 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 836909 10362605 Psed_0785 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004330895.1 836208 D 675635 CDS YP_004330896.1 331694657 10362606 836906..838369 1 NC_015312.1 KEGG: sen:SACE_0762 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 838369 10362606 Psed_0786 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004330896.1 836906 D 675635 CDS YP_004330897.1 331694658 10362607 838476..840359 1 NC_015312.1 KEGG: sen:SACE_0765 serine protease, C-terminal; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 840359 10362607 Psed_0787 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004330897.1 838476 D 675635 CDS YP_004330898.1 331694659 10362608 840356..840937 1 NC_015312.1 TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: sen:SACE_0766 molybdenum cofactor biosynthesis protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 840937 10362608 Psed_0788 Pseudonocardia dioxanivorans CB1190 molybdenum cofactor synthesis domain-containing protein YP_004330898.1 840356 D 675635 CDS YP_004330899.1 331694660 10362609 complement(841110..842120) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: mab:MAB_1874 oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 842120 10362609 Psed_0789 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004330899.1 841110 R 675635 CDS YP_004330900.1 331694661 10362610 complement(842825..843460) 1 NC_015312.1 KEGG: kfl:Kfla_0038 hypothetical protein; hypothetical protein 843460 10362610 Psed_0790 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330900.1 842825 R 675635 CDS YP_004330901.1 331694662 10362611 843579..843743 1 NC_015312.1 KEGG: amd:AMED_8316 hypothetical protein; hypothetical protein 843743 10362611 Psed_0791 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330901.1 843579 D 675635 CDS YP_004330902.1 331694663 10362612 complement(844245..845150) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: amd:AMED_1937 LysR family transcriptional regulator; LysR family transcriptional regulator 845150 10362612 Psed_0792 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004330902.1 844245 R 675635 CDS YP_004330903.1 331694664 10362613 845221..846087 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_1936 carbonyl reductase; short-chain dehydrogenase/reductase SDR 846087 10362613 Psed_0793 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004330903.1 845221 D 675635 CDS YP_004330904.1 331694665 10362614 complement(846094..846522) 1 NC_015312.1 KEGG: amd:AMED_8315 large conductance mechanosensitive channel, MscL family; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 846522 10362614 Psed_0794 Pseudonocardia dioxanivorans CB1190 large conductance mechanosensitive channel protein YP_004330904.1 846094 R 675635 CDS YP_004330905.1 331694666 10362615 complement(846540..847214) 1 NC_015312.1 KEGG: rop:ROP_56940 hypothetical protein; PFAM: SAF domain; SMART: SAF domain; SAF domain-containing protein 847214 10362615 Psed_0795 Pseudonocardia dioxanivorans CB1190 SAF domain-containing protein YP_004330905.1 846540 R 675635 CDS YP_004330906.1 331694667 10362616 complement(847325..847684) 1 NC_015312.1 TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: mil:ML5_0952 regulatory protein, fmdb family; SMART: Regulatory protein, FmdB; FmdB family regulatory protein 847684 10362616 Psed_0796 Pseudonocardia dioxanivorans CB1190 FmdB family regulatory protein YP_004330906.1 847325 R 675635 CDS YP_004330907.1 331694668 10362617 complement(847764..848366) 1 NC_015312.1 KEGG: svi:Svir_32680 5,10-methenyltetrahydrofolate synthetase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 848366 10362617 Psed_0797 Pseudonocardia dioxanivorans CB1190 5-formyltetrahydrofolate cyclo-ligase YP_004330907.1 847764 R 675635 CDS YP_004330908.1 331694669 10362618 848403..849299 1 NC_015312.1 KEGG: ami:Amir_0628 nucleotidyl transferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 849299 10362618 Psed_0798 Pseudonocardia dioxanivorans CB1190 UTP-glucose-1-phosphate uridylyltransferase YP_004330908.1 848403 D 675635 CDS YP_004330909.1 331694670 10362619 849306..850532 1 NC_015312.1 TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; KEGG: ami:Amir_0629 molybdenum cofactor synthesis domain protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 850532 10362619 Psed_0799 Pseudonocardia dioxanivorans CB1190 molybdenum cofactor synthesis domain-containing protein YP_004330909.1 849306 D 675635 CDS YP_004330910.1 331694671 10362620 850542..851210 1 NC_015312.1 KEGG: amd:AMED_8309 ribosomal-protein-alanine N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; GCN5-like N-acetyltransferase 851210 10362620 Psed_0800 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004330910.1 850542 D 675635 CDS YP_004330911.1 331694672 10362621 851427..852635 1 NC_015312.1 KEGG: amd:AMED_8308 hypothetical protein; hypothetical protein 852635 10362621 Psed_0801 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330911.1 851427 D 675635 CDS YP_004330912.1 331694673 10362622 complement(852653..854341) 1 NC_015312.1 KEGG: fra:Francci3_1684 resolvase-like protein; PFAM: Resolvase, N-terminal; Recombinase; SMART: Resolvase, N-terminal; resolvase domain-containing protein 854341 10362622 Psed_0802 Pseudonocardia dioxanivorans CB1190 resolvase domain-containing protein YP_004330912.1 852653 R 675635 CDS YP_004330913.1 331694674 10362624 complement(854527..854760) 1 NC_015312.1 hypothetical protein 854760 10362624 Psed_0803 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330913.1 854527 R 675635 CDS YP_004330914.1 331694675 10362625 complement(855372..856568) 1 NC_015312.1 KEGG: stp:Strop_1985 hypothetical protein; hypothetical protein 856568 10362625 Psed_0804 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330914.1 855372 R 675635 CDS YP_004330915.1 331694676 10362627 857487..857720 1 NC_015312.1 PFAM: Biotin/lipoyl attachment; KEGG: tbi:Tbis_1751 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 857720 10362627 Psed_0806 Pseudonocardia dioxanivorans CB1190 biotin/lipoyl attachment domain-containing protein YP_004330915.1 857487 D 675635 CDS YP_004330916.1 331694677 10362628 complement(857726..858697) 1 NC_015312.1 KEGG: ttr:Tter_1968 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 858697 10362628 Psed_0807 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004330916.1 857726 R 675635 CDS YP_004330917.1 331694678 10362629 complement(858844..859134) 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nca:Noca_1187 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 859134 10362629 Psed_0808 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004330917.1 858844 R 675635 CDS YP_004330918.1 331694679 10362630 complement(859154..859915) 1 NC_015312.1 PFAM: Domain of unknown function DUF59; Ribosomal protein L22/L17; KEGG: svi:Svir_16180 predicted metal-sulfur cluster biosynthetic enzyme; hypothetical protein 859915 10362630 Psed_0809 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330918.1 859154 R 675635 CDS YP_004330919.1 331694680 10362631 complement(859943..861184) 1 NC_015312.1 KEGG: rxy:Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 861184 10362631 Psed_0810 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004330919.1 859943 R 675635 CDS YP_004330920.1 331694681 10362632 complement(861181..861507) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rme:Rmet_1314 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 861507 10362632 Psed_0811 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004330920.1 861181 R 675635 CDS YP_004330921.1 331694682 10362633 complement(861507..862559) 1 NC_015312.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0215 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 862559 10362633 Psed_0812 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004330921.1 861507 R 675635 CDS YP_004330922.1 331694683 10362634 complement(862556..862873) 1 NC_015312.1 PFAM: Monooxygenase component MmoB/DmpM; KEGG: bbt:BBta_1595 toluene-4-monooxygenase system protein D; monooxygenase component MmoB/DmpM 862873 10362634 Psed_0813 Pseudonocardia dioxanivorans CB1190 monooxygenase component MmoB/DmpM YP_004330922.1 862556 R 675635 CDS YP_004330923.1 331694684 10362635 complement(862870..863178) 1 NC_015312.1 PFAM: Toluene-4-monooxygenase system B; KEGG: fra:Francci3_0212 toluene-4-monooxygenase system B; Toluene-4-monooxygenase system B 863178 10362635 Psed_0814 Pseudonocardia dioxanivorans CB1190 Toluene-4-monooxygenase system B YP_004330923.1 862870 R 675635 CDS YP_004330924.1 331694685 10362636 complement(863175..864707) 1 NC_015312.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0211 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 864707 10362636 Psed_0815 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004330924.1 863175 R 675635 CDS YP_004330925.1 331694686 10362637 complement(864751..865227) 1 NC_015312.1 KEGG: reh:H16_B1338 hypothetical protein; hypothetical protein 865227 10362637 Psed_0816 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330925.1 864751 R 675635 CDS YP_004330926.1 331694687 10362638 complement(865236..865715) 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; hypothetical protein 865715 10362638 Psed_0817 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330926.1 865236 R 675635 CDS YP_004330927.1 331694688 10362639 complement(865712..866731) 1 NC_015312.1 PFAM: ThiJ/PfpI; KEGG: nfi:NFIA_002150 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 866731 10362639 Psed_0818 Pseudonocardia dioxanivorans CB1190 ThiJ/PfpI domain-containing protein YP_004330927.1 865712 R 675635 CDS YP_004330928.1 331694689 10362640 866992..867717 1 NC_015312.1 PFAM: ThiJ/PfpI; KEGG: rer:RER_57150 hypothetical protein; ThiJ/PfpI domain-containing protein 867717 10362640 Psed_0819 Pseudonocardia dioxanivorans CB1190 ThiJ/PfpI domain-containing protein YP_004330928.1 866992 D 675635 CDS YP_004330929.1 331694690 10362641 complement(867792..868745) 1 NC_015312.1 KEGG: pmy:Pmen_2638 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 868745 10362641 Psed_0820 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004330929.1 867792 R 675635 CDS YP_004330930.1 331694691 10362642 complement(869989..871110) 1 NC_015312.1 SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: rer:RER_54220 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; muconate and chloromuconate cycloisomerase 871110 10362642 Psed_0821 Pseudonocardia dioxanivorans CB1190 muconate and chloromuconate cycloisomerase YP_004330930.1 869989 R 675635 CDS YP_004330931.1 331694692 10362644 complement(872013..872597) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bur:Bcep18194_B1185 alpha/beta hydrolase; alpha/beta hydrolase 872597 10362644 Psed_0823 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004330931.1 872013 R 675635 CDS YP_004330932.1 331694693 10362645 873345..873902 1 NC_015312.1 hypothetical protein 873902 10362645 Psed_0824 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330932.1 873345 D 675635 CDS YP_004330933.1 331694694 10362646 874010..874975 1 NC_015312.1 KEGG: rha:RHA1_ro04796 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 874975 10362646 Psed_0825 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004330933.1 874010 D 675635 CDS YP_004330934.1 331694695 10362647 complement(874991..876574) 1 NC_015312.1 PFAM: Glycosyl transferase, family 39; KEGG: sen:SACE_0791 glycosyl transferase protein; glycosyl transferase protein 876574 10362647 Psed_0826 Pseudonocardia dioxanivorans CB1190 glycosyl transferase protein YP_004330934.1 874991 R 675635 CDS YP_004330935.1 331694696 10362648 876599..877447 1 NC_015312.1 TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: nfa:nfa49120 methyltransferase; PFAM: Tetrapyrrole methylase; ribosomal RNA small subunit methyltransferase I 877447 10362648 Psed_0827 Pseudonocardia dioxanivorans CB1190 ribosomal RNA small subunit methyltransferase I YP_004330935.1 876599 D 675635 CDS YP_004330936.1 331694697 10362649 complement(877488..878792) 1 NC_015312.1 PFAM: Cation/H+ exchanger; KEGG: amd:AMED_6003 monovalent cation:H+ antiporter-2, CPA2 family; sodium/hydrogen exchanger 878792 10362649 Psed_0828 Pseudonocardia dioxanivorans CB1190 sodium/hydrogen exchanger YP_004330936.1 877488 R 675635 CDS YP_004330937.1 331694698 10362650 complement(878792..879274) 1 NC_015312.1 PFAM: Regulator of K+ conductance, C-terminal; KEGG: amd:AMED_6002 TrkA domain-containing protein; TrkA-C domain-containing protein 879274 10362650 Psed_0829 Pseudonocardia dioxanivorans CB1190 TrkA-C domain-containing protein YP_004330937.1 878792 R 675635 CDS YP_004330938.1 331694699 10362651 complement(879325..879930) 1 NC_015312.1 TIGRFAM: Chorismate mutase, periplasmic; PFAM: Chorismate mutase, type II; KEGG: sen:SACE_7067 chorismate mutase; SMART: Chorismate mutase; chorismate mutase 879930 10362651 Psed_0830 Pseudonocardia dioxanivorans CB1190 chorismate mutase YP_004330938.1 879325 R 675635 CDS YP_004330939.1 331694700 10362652 complement(879943..880932) 1 NC_015312.1 PFAM: O-methyltransferase, family 2; KEGG: sma:SAV_2382 O-methyltransferase; O-methyltransferase 2 880932 10362652 Psed_0831 Pseudonocardia dioxanivorans CB1190 O-methyltransferase 2 YP_004330939.1 879943 R 675635 CDS YP_004330940.1 331694701 10362653 881052..881771 1 NC_015312.1 KEGG: saq:Sare_1382 LuxR family transcriptional regulator; LuxR family transcriptional regulator 881771 10362653 Psed_0832 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004330940.1 881052 D 675635 CDS YP_004330941.1 331694702 10362654 881866..883659 1 NC_015312.1 PFAM: Aminoacyl-tRNA synthetase, class I (M); TIGRFAM: Methionyl-tRNA synthetase, class Ia; HAMAP: Methionyl-tRNA synthetase; KEGG: sen:SACE_0799 methionyl-tRNA synthetase; methionyl-tRNA synthetase 883659 10362654 Psed_0833 Pseudonocardia dioxanivorans CB1190 methionyl-tRNA synthetase YP_004330941.1 881866 D 675635 CDS YP_004330942.1 331694703 10362655 883685..884587 1 NC_015312.1 KEGG: sen:SACE_0800 deoxyribonuclease; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase 884587 10362655 Psed_0834 Pseudonocardia dioxanivorans CB1190 TatD family hydrolase YP_004330942.1 883685 D 675635 CDS YP_004330943.1 331694704 10362656 884784..886937 1 NC_015312.1 PFAM: Transglycosylase-like; G5; Domain of unknown function DUF348; KEGG: svi:Svir_32470 hypothetical protein; transglycosylase-like domain-containing protein 886937 10362656 Psed_0835 Pseudonocardia dioxanivorans CB1190 transglycosylase-like domain-containing protein YP_004330943.1 884784 D 675635 CDS YP_004330944.1 331694705 10362657 886972..887826 1 NC_015312.1 SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: sen:SACE_0802 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; ribosomal RNA small subunit methyltransferase A 887826 10362657 Psed_0836 Pseudonocardia dioxanivorans CB1190 ribosomal RNA small subunit methyltransferase A YP_004330944.1 886972 D 675635 CDS YP_004330945.1 331694706 10362658 888194..888754 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: art:Arth_3006 PadR family transcriptional regulator; PadR family transcriptional regulator 888754 10362658 Psed_0837 Pseudonocardia dioxanivorans CB1190 PadR family transcriptional regulator YP_004330945.1 888194 D 675635 CDS YP_004330946.1 331694707 10362659 888730..890256 1 NC_015312.1 KEGG: ach:Achl_2717 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 890256 10362659 Psed_0838 Pseudonocardia dioxanivorans CB1190 EmrB/QacA subfamily drug resistance transporter YP_004330946.1 888730 D 675635 CDS YP_004330947.1 331694708 10362660 890328..891299 1 NC_015312.1 PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: amd:AMED_8246 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 891299 10362660 Psed_0839 Pseudonocardia dioxanivorans CB1190 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_004330947.1 890328 D 675635 CDS YP_004330948.1 331694709 10362661 891299..893089 1 NC_015312.1 KEGG: ami:Amir_0650 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 893089 10362661 Psed_0840 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330948.1 891299 D 675635 CDS YP_004330949.1 331694710 10362662 893210..893575 1 NC_015312.1 KEGG: rop:ROP_10760 hypothetical protein; hypothetical protein 893575 10362662 Psed_0841 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330949.1 893210 D 675635 CDS YP_004330950.1 331694711 10362663 complement(893750..894184) 1 NC_015312.1 manually curated; KEGG: fre:Franean1_2584 hypothetical protein; hypothetical protein 894184 10362663 Psed_0842 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330950.1 893750 R 675635 CDS YP_004330951.1 331694712 10362664 894259..894816 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_2583 TetR family transcriptional regulator; TetR family transcriptional regulator 894816 10362664 Psed_0843 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004330951.1 894259 D 675635 CDS YP_004330952.1 331694713 10362665 894906..895886 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: tcu:Tcur_1684 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like; daunorubicin resistance ABC transporter ATPase subunit 895886 10362665 Psed_0844 Pseudonocardia dioxanivorans CB1190 daunorubicin resistance ABC transporter ATPase subunit YP_004330952.1 894906 D 675635 CDS YP_004330953.1 331694714 10362666 895883..896758 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: sen:SACE_0423 multidrug ABC transporter permease; ABC transporter 896758 10362666 Psed_0845 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330953.1 895883 D 675635 CDS YP_004330954.1 331694715 10362667 complement(896740..899961) 1 NC_015312.1 KEGG: cai:Caci_4666 transcriptional regulator, winged helix family; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 899961 10362667 Psed_0846 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004330954.1 896740 R 675635 CDS YP_004330955.1 331694716 10362668 complement(900086..901438) 1 NC_015312.1 KEGG: msp:Mspyr1_19610 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; beta-Ala-His dipeptidase 901438 10362668 Psed_0847 Pseudonocardia dioxanivorans CB1190 beta-Ala-His dipeptidase YP_004330955.1 900086 R 675635 CDS YP_004330956.1 331694717 10362669 901477..903147 1 NC_015312.1 KEGG: ami:Amir_0652 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain fatty acid--ACP ligase 903147 10362669 Psed_0848 Pseudonocardia dioxanivorans CB1190 long-chain fatty acid--ACP ligase YP_004330956.1 901477 D 675635 CDS YP_004330957.1 331694718 10362670 complement(903230..903811) 1 NC_015312.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: req:REQ_12410 aminoacyl-tRNA hydrolase pth; peptidyl-tRNA hydrolase 903811 10362670 Psed_0849 Pseudonocardia dioxanivorans CB1190 peptidyl-tRNA hydrolase YP_004330957.1 903230 R 675635 CDS YP_004330958.1 331694719 10362671 complement(903817..904467) 1 NC_015312.1 TIGRFAM: Ribosomal protein L25, long-form; HAMAP: Ribosomal protein L25, long-form; KEGG: rop:ROP_57640 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25, short-form; 50S ribosomal protein L25 904467 10362671 Psed_0850 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L25 YP_004330958.1 903817 R 675635 CDS YP_004330959.1 331694720 10362673 complement(907472..907891) 1 NC_015312.1 hypothetical protein 907891 10362673 Psed_0852 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330959.1 907472 R 675635 CDS YP_004330960.1 331694721 10362674 908425..908793 1 NC_015312.1 hypothetical protein 908793 10362674 Psed_0853 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330960.1 908425 D 675635 CDS YP_004330961.1 331694722 10362675 908790..908987 1 NC_015312.1 hypothetical protein 908987 10362675 Psed_0854 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330961.1 908790 D 675635 CDS YP_004330962.1 331694723 10362676 908975..909661 1 NC_015312.1 KEGG: fre:Franean1_4241 hypothetical protein; hypothetical protein 909661 10362676 Psed_0855 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330962.1 908975 D 675635 CDS YP_004330963.1 331694724 10362677 909658..911694 1 NC_015312.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fre:Franean1_1448 cell divisionFtsK/SpoIIIE; DNA translocase FtsK 911694 10362677 Psed_0856 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004330963.1 909658 D 675635 CDS YP_004330964.1 331694725 10362678 911767..911928 1 NC_015312.1 hypothetical protein 911928 10362678 Psed_0857 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330964.1 911767 D 675635 CDS YP_004330965.1 331694726 10362679 911940..912188 1 NC_015312.1 hypothetical protein 912188 10362679 Psed_0858 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330965.1 911940 D 675635 CDS YP_004330966.1 331694727 10362680 complement(912190..912414) 1 NC_015312.1 hypothetical protein 912414 10362680 Psed_0859 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330966.1 912190 R 675635 CDS YP_004330967.1 331694728 10362681 complement(912527..916072) 1 NC_015312.1 KEGG: ote:Oter_1689 cell wall surface anchor family protein; hypothetical protein 916072 10362681 Psed_0860 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330967.1 912527 R 675635 CDS YP_004330968.1 331694729 10362682 complement(916077..916403) 1 NC_015312.1 hypothetical protein 916403 10362682 Psed_0861 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330968.1 916077 R 675635 CDS YP_004330969.1 331694730 10362683 complement(916558..916971) 1 NC_015312.1 hypothetical protein 916971 10362683 Psed_0862 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330969.1 916558 R 675635 CDS YP_004330970.1 331694731 10362684 complement(916971..917678) 1 NC_015312.1 hypothetical protein 917678 10362684 Psed_0863 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330970.1 916971 R 675635 CDS YP_004330971.1 331694732 10362685 complement(917685..918101) 1 NC_015312.1 hypothetical protein 918101 10362685 Psed_0864 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330971.1 917685 R 675635 CDS YP_004330972.1 331694733 10362686 complement(918904..920181) 1 NC_015312.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 920181 10362686 Psed_0865 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004330972.1 918904 R 675635 CDS YP_004330973.1 331694734 10362687 complement(920178..920933) 1 NC_015312.1 manually curated; PFAM: IstB-like ATP-binding protein; KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 920933 10362687 Psed_0866 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004330973.1 920178 R 675635 CDS YP_004330974.1 331694735 10362688 complement(921004..922629) 1 NC_015312.1 KEGG: rer:pREL1_0265 transposase; manually curated; PFAM: Integrase, catalytic core; integrase catalytic subunit 922629 10362688 Psed_0867 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004330974.1 921004 R 675635 CDS YP_004330975.1 331694736 10362689 complement(923208..923516) 1 NC_015312.1 hypothetical protein 923516 10362689 Psed_0868 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330975.1 923208 R 675635 CDS YP_004330976.1 331694737 10362690 complement(923513..923836) 1 NC_015312.1 hypothetical protein 923836 10362690 Psed_0869 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330976.1 923513 R 675635 CDS YP_004330977.1 331694738 10362691 complement(923886..925340) 1 NC_015312.1 KEGG: mkm:Mkms_2962 hypothetical protein; hypothetical protein 925340 10362691 Psed_0870 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330977.1 923886 R 675635 CDS YP_004330978.1 331694739 10362692 complement(925337..925672) 1 NC_015312.1 hypothetical protein 925672 10362692 Psed_0871 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330978.1 925337 R 675635 CDS YP_004330979.1 331694740 10362693 complement(925890..926156) 1 NC_015312.1 PFAM: Prophage CP4-57 regulatory; KEGG: gob:Gobs_0015 regulatory protein MerR; prophage CP4-57 regulator 926156 10362693 Psed_0872 Pseudonocardia dioxanivorans CB1190 prophage CP4-57 regulator YP_004330979.1 925890 R 675635 CDS YP_004330980.1 331694741 10362694 926175..926834 1 NC_015312.1 KEGG: msp:Mspyr1_12070 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 926834 10362694 Psed_0873 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004330980.1 926175 D 675635 CDS YP_004330981.1 331694742 10362695 926836..928029 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: mau:Micau_5363 integrase protein; integrase protein 928029 10362695 Psed_0874 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004330981.1 926836 D 675635 CDS YP_004330982.1 331694743 10362696 complement(928078..929058) 1 NC_015312.1 TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: sen:SACE_0816 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 929058 10362696 Psed_0875 Pseudonocardia dioxanivorans CB1190 ribose-phosphate pyrophosphokinase YP_004330982.1 928078 R 675635 CDS YP_004330983.1 331694744 10362697 complement(929055..930656) 1 NC_015312.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: ami:Amir_0657 UDP-N-acetylglucosamine pyrophosphorylase; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 930656 10362697 Psed_0876 Pseudonocardia dioxanivorans CB1190 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_004330983.1 929055 R 675635 CDS YP_004330984.1 331694745 10362698 931022..931486 1 NC_015312.1 PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 931486 10362698 Psed_0877 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004330984.1 931022 D 675635 CDS YP_004330985.1 331694746 10362699 931597..932034 1 NC_015312.1 KEGG: ske:Sked_32410 regulator of disulfide bond formation; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; PFAM: Peroxiredoxin, OsmC-like protein; peroxiredoxin 932034 10362699 Psed_0878 Pseudonocardia dioxanivorans CB1190 peroxiredoxin YP_004330985.1 931597 D 675635 CDS YP_004330986.1 331694747 10362701 932367..933371 1 NC_015312.1 KEGG: svi:Svir_16070 delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 933371 10362701 Psed_0879 Pseudonocardia dioxanivorans CB1190 stearoyl-CoA 9-desaturase YP_004330986.1 932367 D 675635 CDS YP_004330987.1 331694748 10362702 933568..934242 1 NC_015312.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: amd:AMED_0567 LmbE family protein; LmbE family protein 934242 10362702 Psed_0880 Pseudonocardia dioxanivorans CB1190 LmbE family protein YP_004330987.1 933568 D 675635 CDS YP_004330988.1 331694749 10362703 934289..934558 1 NC_015312.1 PFAM: Protein of unknown function DUF2277; KEGG: ami:Amir_0703 hypothetical protein; hypothetical protein 934558 10362703 Psed_0881 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330988.1 934289 D 675635 CDS YP_004330989.1 331694750 10362704 934580..937948 1 NC_015312.1 KEGG: scb:SCAB_61611 protease; PFAM: Peptidase S41; WD40-like Beta Propeller; SMART: Peptidase S41; peptidase S41 937948 10362704 Psed_0882 Pseudonocardia dioxanivorans CB1190 peptidase S41 YP_004330989.1 934580 D 675635 CDS YP_004330990.1 331694751 10362705 938034..939044 1 NC_015312.1 KEGG: fra:Francci3_4341 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 939044 10362705 Psed_0883 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004330990.1 938034 D 675635 CDS YP_004330991.1 331694752 10362706 939041..939793 1 NC_015312.1 KEGG: sen:SACE_7259 ABC transporter membrane protein; ABC transporter membrane protein 939793 10362706 Psed_0884 Pseudonocardia dioxanivorans CB1190 ABC transporter membrane protein YP_004330991.1 939041 D 675635 CDS YP_004330992.1 331694753 10362707 939949..943533 1 NC_015312.1 TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Transcription-repair-coupling factor domain; KEGG: sen:SACE_0826 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; transcription-repair coupling factor 943533 10362707 Psed_0885 Pseudonocardia dioxanivorans CB1190 transcription-repair coupling factor YP_004330992.1 939949 D 675635 CDS YP_004330993.1 331694754 10362708 943665..944612 1 NC_015312.1 KEGG: ami:Amir_0666 hypothetical protein; hypothetical protein 944612 10362708 Psed_0886 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004330993.1 943665 D 675635 CDS YP_004330994.1 331694755 10362709 944620..945636 1 NC_015312.1 KEGG: svi:Svir_32280 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; nucleotide pyrophosphohydrolase 945636 10362709 Psed_0887 Pseudonocardia dioxanivorans CB1190 nucleotide pyrophosphohydrolase YP_004330994.1 944620 D 675635 CDS YP_004330995.1 331694756 10362710 945696..947096 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: nml:Namu_1755 transposase IS4 family protein; transposase IS4 family protein 947096 10362710 Psed_0888 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004330995.1 945696 D 675635 CDS YP_004330996.1 331694757 10362711 complement(947228..948544) 1 NC_015312.1 KEGG: ami:Amir_4289 Dyp-type peroxidase; TIGRFAM: Tat-translocated enzyme; Dyp-type peroxidase; PFAM: Dyp-type peroxidase; Tat-translocated protein 948544 10362711 Psed_0889 Pseudonocardia dioxanivorans CB1190 Tat-translocated protein YP_004330996.1 947228 R 675635 CDS YP_004330997.1 331694758 10362712 complement(948556..949695) 1 NC_015312.1 PFAM: Peptidase M75, Imelysin; KEGG: ami:Amir_4288 hypothetical protein; peptidase M75, Imelysin 949695 10362712 Psed_0890 Pseudonocardia dioxanivorans CB1190 peptidase M75, Imelysin YP_004330997.1 948556 R 675635 CDS YP_004330998.1 331694759 10362713 complement(949728..950549) 1 NC_015312.1 PFAM: Iron permease FTR1; KEGG: ami:Amir_4287 iron permease FTR1; iron permease 950549 10362713 Psed_0891 Pseudonocardia dioxanivorans CB1190 iron permease YP_004330998.1 949728 R 675635 CDS YP_004330999.1 331694760 10362714 950944..951777 1 NC_015312.1 PFAM: Iron permease FTR1; KEGG: fal:FRAAL1404 transmembrane protein; iron permease 951777 10362714 Psed_0892 Pseudonocardia dioxanivorans CB1190 iron permease YP_004330999.1 950944 D 675635 CDS YP_004331000.1 331694761 10362715 951815..952942 1 NC_015312.1 PFAM: Peptidase M75, Imelysin; KEGG: fri:FraEuI1c_6364 peptidase M75, imelysin; peptidase M75, Imelysin 952942 10362715 Psed_0893 Pseudonocardia dioxanivorans CB1190 peptidase M75, Imelysin YP_004331000.1 951815 D 675635 CDS YP_004331001.1 331694762 10362716 952951..954198 1 NC_015312.1 KEGG: cai:Caci_3900 Dyp-type peroxidase; TIGRFAM: Tat-translocated enzyme; Twin-arginine translocation pathway, signal sequence; Dyp-type peroxidase; PFAM: Dyp-type peroxidase; Tat-translocated protein 954198 10362716 Psed_0894 Pseudonocardia dioxanivorans CB1190 Tat-translocated protein YP_004331001.1 952951 D 675635 CDS YP_004331002.1 331694763 10362717 complement(954213..954650) 1 NC_015312.1 KEGG: ami:Amir_0670 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; hypothetical protein 954650 10362717 Psed_0895 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331002.1 954213 R 675635 CDS YP_004331003.1 331694764 10362718 954823..956115 1 NC_015312.1 PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: sen:SACE_0838 phosphopyruvate hydratase; enolase 956115 10362718 Psed_0896 Pseudonocardia dioxanivorans CB1190 enolase YP_004331003.1 954823 D 675635 CDS YP_004331004.1 331694765 10362719 956118..956633 1 NC_015312.1 PFAM: Septum formation initiator; KEGG: sen:SACE_0839 septum formation initiator; septum formation initiator 956633 10362719 Psed_0897 Pseudonocardia dioxanivorans CB1190 septum formation initiator YP_004331004.1 956118 D 675635 CDS YP_004331005.1 331694766 10362720 956630..957160 1 NC_015312.1 PFAM: Protein of unknown function DUF501; KEGG: sna:Snas_5821 hypothetical protein; hypothetical protein 957160 10362720 Psed_0898 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331005.1 956630 D 675635 CDS YP_004331006.1 331694767 10362721 complement(957147..959261) 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; KEGG: mil:ML5_5311 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 959261 10362721 Psed_0899 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004331006.1 957147 R 675635 CDS YP_004331007.1 331694768 10362722 959373..960326 1 NC_015312.1 PFAM: Ppx/GppA phosphatase; KEGG: sen:SACE_0843 Ppx/GppA family phosphatase; Ppx/GppA phosphatase 960326 10362722 Psed_0900 Pseudonocardia dioxanivorans CB1190 Ppx/GppA phosphatase YP_004331007.1 959373 D 675635 CDS YP_004331008.1 331694769 10362723 960336..961049 1 NC_015312.1 PFAM: Uracil-DNA glycosylase-like; KEGG: rop:ROP_60020 uracil-DNA glycosylase; uracil-DNA glycosylase 961049 10362723 Psed_0901 Pseudonocardia dioxanivorans CB1190 uracil-DNA glycosylase YP_004331008.1 960336 D 675635 CDS YP_004331009.1 331694770 10362724 961079..962554 1 NC_015312.1 KEGG: ami:Amir_0688 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase (ubiquinone) 962554 10362724 Psed_0902 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (ubiquinone) YP_004331009.1 961079 D 675635 CDS YP_004331010.1 331694771 10362725 complement(962717..963736) 1 NC_015312.1 KEGG: sro:Sros_4162 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; hypothetical protein 963736 10362725 Psed_0903 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331010.1 962717 R 675635 CDS YP_004331011.1 331694772 10362726 complement(963733..964176) 1 NC_015312.1 KEGG: mav:MAV_2709 short chain dehydrogenase; manually curated; PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 964176 10362726 Psed_0904 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004331011.1 963733 R 675635 CDS YP_004331012.1 331694773 10362727 964288..965217 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msm:MSMEG_6677 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 965217 10362727 Psed_0905 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004331012.1 964288 D 675635 CDS YP_004331013.1 331694774 10362729 965443..965985 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sro:Sros_3264 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 965985 10362729 Psed_0906 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004331013.1 965443 D 675635 CDS YP_004331014.1 331694775 10362730 966672..967145 1 NC_015312.1 KEGG: ank:AnaeK_3390 MJ0042 family finger-like protein; hypothetical protein 967145 10362730 Psed_0907 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331014.1 966672 D 675635 CDS YP_004331015.1 331694776 10362731 967904..969442 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mav:MAV_3533 transposase; integrase catalytic subunit 969442 10362731 Psed_0909 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004331015.1 967904 D 675635 CDS YP_004331016.1 331694777 10362732 969439..970218 1 NC_015312.1 KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 970218 10362732 Psed_0910 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004331016.1 969439 D 675635 CDS YP_004331017.1 331694778 10362733 complement(971810..972202) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cai:Caci_4804 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 972202 10362733 Psed_0911 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331017.1 971810 R 675635 CDS YP_004331018.1 331694779 10362734 972462..973226 1 NC_015312.1 KEGG: amd:AMED_6526 two-component system response regulator; PFAM: ANTAR; GAF; SMART: GAF; ANTAR domain-containing protein 973226 10362734 Psed_0912 Pseudonocardia dioxanivorans CB1190 ANTAR domain-containing protein YP_004331018.1 972462 D 675635 CDS YP_004331019.1 331694780 10362736 complement(974176..975168) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: amd:AMED_3495 luciferase-like protein; luciferase-like protein 975168 10362736 Psed_0914 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331019.1 974176 R 675635 CDS YP_004331020.1 331694781 10362737 complement(975281..975862) 1 NC_015312.1 KEGG: pla:Plav_1269 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; phosphinothricin acetyltransferase 975862 10362737 Psed_0915 Pseudonocardia dioxanivorans CB1190 phosphinothricin acetyltransferase YP_004331020.1 975281 R 675635 CDS YP_004331021.1 331694782 10362738 complement(975925..976932) 1 NC_015312.1 KEGG: aeh:Mlg_1624 hypothetical protein; hypothetical protein 976932 10362738 Psed_0916 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331021.1 975925 R 675635 CDS YP_004331022.1 331694783 10362739 complement(977009..977389) 1 NC_015312.1 KEGG: svi:Svir_02010 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 977389 10362739 Psed_0917 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004331022.1 977009 R 675635 CDS YP_004331023.1 331694784 10362740 977464..977937 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amd:AMED_0761 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 977937 10362740 Psed_0918 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331023.1 977464 D 675635 CDS YP_004331024.1 331694785 10362741 complement(978010..978750) 1 NC_015312.1 KEGG: cai:Caci_0325 hypothetical protein; hypothetical protein 978750 10362741 Psed_0919 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331024.1 978010 R 675635 CDS YP_004331025.1 331694786 10362742 complement(978936..979670) 1 NC_015312.1 PFAM: Metallo-dependent phosphatase; KEGG: sco:SCO6075 hypothetical protein; metallophosphoesterase 979670 10362742 Psed_0920 Pseudonocardia dioxanivorans CB1190 metallophosphoesterase YP_004331025.1 978936 R 675635 CDS YP_004331026.1 331694787 10362743 979775..980125 1 NC_015312.1 KEGG: fre:Franean1_6246 hypothetical protein; hypothetical protein 980125 10362743 Psed_0921 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331026.1 979775 D 675635 CDS YP_004331027.1 331694788 10362744 980290..980544 1 NC_015312.1 KEGG: vcn:VOLCADRAFT_89522 hypothetical protein; hypothetical protein 980544 10362744 Psed_0922 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331027.1 980290 D 675635 CDS YP_004331028.1 331694789 10362745 980801..981271 1 NC_015312.1 KEGG: ppy:PPE_00386 hypothetical protein; hypothetical protein 981271 10362745 Psed_0923 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331028.1 980801 D 675635 CDS YP_004331029.1 331694790 10362746 complement(981274..981807) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aai:AARI_11220 GNAT family acetyltransferase; GCN5-like N-acetyltransferase 981807 10362746 Psed_0924 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004331029.1 981274 R 675635 CDS YP_004331030.1 331694791 10362747 982041..982877 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_5262 acetyltransferase; GCN5-like N-acetyltransferase 982877 10362747 Psed_0925 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004331030.1 982041 D 675635 CDS YP_004331031.1 331694792 10362748 complement(982889..983344) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: cai:Caci_6233 cupin 2 conserved barrel domain protein; cupin 983344 10362748 Psed_0926 Pseudonocardia dioxanivorans CB1190 cupin YP_004331031.1 982889 R 675635 CDS YP_004331032.1 331694793 10362749 983389..984009 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sma:SAV_1382 TetR family transcriptional regulator; TetR family transcriptional regulator 984009 10362749 Psed_0927 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331032.1 983389 D 675635 CDS YP_004331033.1 331694794 10362750 984101..984925 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rer:RER_54910 oxidoreductase; short-chain dehydrogenase/reductase SDR 984925 10362750 Psed_0928 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004331033.1 984101 D 675635 CDS YP_004331034.1 331694795 10362751 984948..986174 1 NC_015312.1 KEGG: sma:SAV_1381 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; acyl-CoA dehydrogenase 986174 10362751 Psed_0929 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004331034.1 984948 D 675635 CDS YP_004331035.1 331694796 10362752 986184..986684 1 NC_015312.1 KEGG: amd:AMED_2600 hypothetical protein; hypothetical protein 986684 10362752 Psed_0930 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331035.1 986184 D 675635 CDS YP_004331036.1 331694797 10362753 986792..987601 1 NC_015312.1 KEGG: sen:SACE_0895 hypothetical protein; hypothetical protein 987601 10362753 Psed_0931 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331036.1 986792 D 675635 CDS YP_004331037.1 331694798 10362754 complement(987744..988973) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: amd:AMED_8108 acetyl-CoA C-acetyltransferase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase 988973 10362754 Psed_0932 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004331037.1 987744 R 675635 CDS YP_004331038.1 331694799 10362755 989104..989559 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: amd:AMED_7439 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 989559 10362755 Psed_0933 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004331038.1 989104 D 675635 CDS YP_004331039.1 331694800 10362756 989740..990099 1 NC_015312.1 PFAM: YCII-related; KEGG: rer:RER_52620 hypothetical protein; hypothetical protein 990099 10362756 Psed_0934 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331039.1 989740 D 675635 CDS YP_004331040.1 331694801 10362757 990119..991426 1 NC_015312.1 KEGG: sro:Sros_4397 sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 991426 10362757 Psed_0935 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331040.1 990119 D 675635 CDS YP_004331041.1 331694802 10362758 complement(991420..992601) 1 NC_015312.1 KEGG: tpr:Tpau_0903 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 992601 10362758 Psed_0936 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331041.1 991420 R 675635 CDS YP_004331042.1 331694803 10362759 992975..996898 1 NC_015312.1 KEGG: cai:Caci_6918 transcriptional regulator, XRE family; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; hypothetical protein 996898 10362759 Psed_0937 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331042.1 992975 D 675635 CDS YP_004331043.1 331694804 10362760 996960..998330 1 NC_015312.1 TIGRFAM: Cystathionine beta-synthase; KEGG: sen:SACE_0899 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cystathionine beta-synthase, core; cystathionine beta-synthase 998330 10362760 Psed_0938 Pseudonocardia dioxanivorans CB1190 cystathionine beta-synthase YP_004331043.1 996960 D 675635 CDS YP_004331044.1 331694805 10362761 998360..999508 1 NC_015312.1 PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: nml:Namu_4420 cystathionine gamma-synthase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 999508 10362761 Psed_0939 Pseudonocardia dioxanivorans CB1190 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004331044.1 998360 D 675635 CDS YP_004331045.1 331694806 10362762 complement(999557..999778) 1 NC_015312.1 KEGG: sen:SACE_0903 hypothetical protein; hypothetical protein 999778 10362762 Psed_0940 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331045.1 999557 R 675635 CDS YP_004331046.1 331694807 10362763 999859..1001157 1 NC_015312.1 KEGG: svi:Svir_31840 threonine dehydratase; TIGRFAM: Threonine dehydratase II; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT; threonine dehydratase 1001157 10362763 Psed_0941 Pseudonocardia dioxanivorans CB1190 threonine dehydratase YP_004331046.1 999859 D 675635 CDS YP_004331047.1 331694808 10362764 complement(1001165..1001656) 1 NC_015312.1 KEGG: sen:SACE_0907 transcription elongation factor G; TIGRFAM: Transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; transcription elongation factor GreA 1001656 10362764 Psed_0942 Pseudonocardia dioxanivorans CB1190 transcription elongation factor GreA YP_004331047.1 1001165 R 675635 CDS YP_004331048.1 331694809 10362765 1002148..1003080 1 NC_015312.1 KEGG: amd:AMED_8090 LmbE family protein; TIGRFAM: Mycothiol conjugate amidase, Mca; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; mycothiol conjugate amidase Mca 1003080 10362765 Psed_0943 Pseudonocardia dioxanivorans CB1190 mycothiol conjugate amidase Mca YP_004331048.1 1002148 D 675635 CDS YP_004331049.1 331694810 10362766 complement(1003088..1003705) 1 NC_015312.1 KEGG: amd:AMED_5086 hypothetical protein; hypothetical protein 1003705 10362766 Psed_0944 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331049.1 1003088 R 675635 CDS YP_004331050.1 331694811 10362767 1003905..1004228 1 NC_015312.1 KEGG: sen:SACE_0910 hypothetical protein; hypothetical protein 1004228 10362767 Psed_0945 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331050.1 1003905 D 675635 CDS YP_004331051.1 331694812 10362768 1004271..1006286 1 NC_015312.1 KEGG: sen:SACE_0923 hypothetical protein; hypothetical protein 1006286 10362768 Psed_0946 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331051.1 1004271 D 675635 CDS YP_004331052.1 331694813 10362769 1006419..1007030 1 NC_015312.1 KEGG: amd:AMED_8084 hypothetical protein; hypothetical protein 1007030 10362769 Psed_0947 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331052.1 1006419 D 675635 CDS YP_004331053.1 331694814 10362770 complement(1007050..1007733) 1 NC_015312.1 manually curated; TIGRFAM: HylII; KEGG: sen:SACE_0920 hemolysin III family channel protein; PFAM: Hly-III-related; hemolysin III family channel protein 1007733 10362770 Psed_0948 Pseudonocardia dioxanivorans CB1190 hemolysin III family channel protein YP_004331053.1 1007050 R 675635 CDS YP_004331054.1 331694815 10362771 1007856..1008623 1 NC_015312.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: sen:SACE_0919 undecaprenyl pyrophosphate synthetase; UDP pyrophosphate synthase 1008623 10362771 Psed_0949 Pseudonocardia dioxanivorans CB1190 UDP pyrophosphate synthase YP_004331054.1 1007856 D 675635 CDS YP_004331055.1 331694816 10362772 complement(1008762..1009118) 1 NC_015312.1 hypothetical protein 1009118 10362772 Psed_0950 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331055.1 1008762 R 675635 CDS YP_004331056.1 331694817 10362773 complement(1009390..1009770) 1 NC_015312.1 hypothetical protein 1009770 10362773 Psed_0951 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331056.1 1009390 R 675635 CDS YP_004331057.1 331694818 10362774 1010116..1011402 1 NC_015312.1 KEGG: ami:Amir_0716 hypothetical protein; hypothetical protein 1011402 10362774 Psed_0952 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331057.1 1010116 D 675635 CDS YP_004331058.1 331694819 10362775 1011703..1013058 1 NC_015312.1 KEGG: sen:SACE_0915 PhoH-like phosphate starvation-induced protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; PhoH family protein 1013058 10362775 Psed_0953 Pseudonocardia dioxanivorans CB1190 PhoH family protein YP_004331058.1 1011703 D 675635 CDS YP_004331059.1 331694820 10362776 complement(1013232..1014683) 1 NC_015312.1 TIGRFAM: IMP dehydrogenase-related 1; KEGG: amd:AMED_8071 IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; IMP dehydrogenase 1014683 10362776 Psed_0954 Pseudonocardia dioxanivorans CB1190 IMP dehydrogenase YP_004331059.1 1013232 R 675635 CDS YP_004331060.1 331694821 10362777 1014810..1015844 1 NC_015312.1 PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; KEGG: fre:Franean1_2019 ketopantoate reductase ApbA/PanE; ketopantoate reductase ApbA/PanE domain-containing protein 1015844 10362777 Psed_0955 Pseudonocardia dioxanivorans CB1190 ketopantoate reductase ApbA/PanE domain-containing protein YP_004331060.1 1014810 D 675635 CDS YP_004331061.1 331694822 10362778 complement(1015875..1017416) 1 NC_015312.1 PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; TIGRFAM: DNA ligase, ATP-dependent; HAMAP: DNA ligase, ATP-dependent, bacterial/archaeal; KEGG: gob:Gobs_2344 DNA ligase I, ATP-dependent Dnl1; DNA ligase 1017416 10362778 Psed_0956 Pseudonocardia dioxanivorans CB1190 DNA ligase YP_004331061.1 1015875 R 675635 CDS YP_004331062.1 331694823 10362779 complement(1017493..1018683) 1 NC_015312.1 KEGG: ami:Amir_5145 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate phosphodiesterase 1018683 10362779 Psed_0957 Pseudonocardia dioxanivorans CB1190 diguanylate phosphodiesterase YP_004331062.1 1017493 R 675635 CDS YP_004331063.1 331694824 10362780 complement(1018781..1020181) 1 NC_015312.1 HAMAP: Fumarate hydratase, class II; KEGG: ami:Amir_0720 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal; class II fumarate hydratase 1020181 10362780 Psed_0958 Pseudonocardia dioxanivorans CB1190 class II fumarate hydratase YP_004331063.1 1018781 R 675635 CDS YP_004331064.1 331694825 10362781 complement(1020287..1020925) 1 NC_015312.1 PFAM: YkuD domain; KEGG: amd:AMED_8939 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 1020925 10362781 Psed_0959 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004331064.1 1020287 R 675635 CDS YP_004331065.1 331694826 10362782 complement(1021205..1022233) 1 NC_015312.1 TIGRFAM: Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase; KEGG: ami:Amir_0724 fructose 1,6-bisphosphatase II; PFAM: Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase; fructose-1,6-bisphosphatase 1022233 10362782 Psed_0960 Pseudonocardia dioxanivorans CB1190 fructose-1,6-bisphosphatase YP_004331065.1 1021205 R 675635 CDS YP_004331066.1 331694827 10362783 1022326..1023084 1 NC_015312.1 KEGG: rop:ROP_59280 hypothetical protein; hypothetical protein 1023084 10362783 Psed_0961 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331066.1 1022326 D 675635 CDS YP_004331067.1 331694828 10362784 complement(1023086..1023310) 1 NC_015312.1 TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: tpr:Tpau_3117 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; exodeoxyribonuclease 7 small subunit 1023310 10362784 Psed_0962 Pseudonocardia dioxanivorans CB1190 exodeoxyribonuclease 7 small subunit YP_004331067.1 1023086 R 675635 CDS YP_004331068.1 331694829 10362785 complement(1023307..1024578) 1 NC_015312.1 TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exonuclease VII, large subunit; KEGG: sen:SACE_0937 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; exodeoxyribonuclease 7 large subunit 1024578 10362785 Psed_0963 Pseudonocardia dioxanivorans CB1190 exodeoxyribonuclease 7 large subunit YP_004331068.1 1023307 R 675635 CDS YP_004331069.1 331694830 10362786 complement(1024575..1025225) 1 NC_015312.1 KEGG: amd:AMED_8055 hypothetical protein; hypothetical protein 1025225 10362786 Psed_0964 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331069.1 1024575 R 675635 CDS YP_004331070.1 331694831 10362787 1025359..1026318 1 NC_015312.1 PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: rer:RER_42340 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1026318 10362787 Psed_0965 Pseudonocardia dioxanivorans CB1190 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_004331070.1 1025359 D 675635 CDS YP_004331071.1 331694832 10362788 complement(1026248..1026901) 1 NC_015312.1 KEGG: ami:Amir_0730 hypothetical protein; hypothetical protein 1026901 10362788 Psed_0966 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331071.1 1026248 R 675635 CDS YP_004331072.1 331694833 10362789 complement(1026991..1028553) 1 NC_015312.1 PFAM: DNA recombination RmuC; KEGG: ace:Acel_1860 hypothetical protein; RmuC-domain-containing protein 1028553 10362789 Psed_0967 Pseudonocardia dioxanivorans CB1190 RmuC-domain-containing protein YP_004331072.1 1026991 R 675635 CDS YP_004331073.1 331694834 10362790 complement(1028691..1029185) 1 NC_015312.1 KEGG: svi:Svir_31430 O-6-methylguanine DNA methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 1029185 10362790 Psed_0968 Pseudonocardia dioxanivorans CB1190 methylated-DNA--protein-cysteine methyltransferase YP_004331073.1 1028691 R 675635 CDS YP_004331074.1 331694835 10362791 complement(1029182..1030726) 1 NC_015312.1 KEGG: svi:Svir_31420 DNA-3-methyladenine glycosylase II/DNA-O6-methylguanine--protein-cysteine S-methyltransferase/transcriptional regulator Ada; PFAM: Ada DNA repair, metal-binding; HTH transcriptional regulator, AraC; AlkA, N-terminal; HhH-GPD domain; SMART: Helix-turn-helix, AraC type, DNA binding domain; HhH-GPD domain; DNA repair protein and transcriptional regulator 1030726 10362791 Psed_0969 Pseudonocardia dioxanivorans CB1190 DNA repair protein and transcriptional regulator YP_004331074.1 1029182 R 675635 CDS YP_004331075.1 331694836 10362792 complement(1030740..1031216) 1 NC_015312.1 KEGG: mmi:MMAR_3358 hypothetical protein; hypothetical protein 1031216 10362792 Psed_0970 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331075.1 1030740 R 675635 CDS YP_004331076.1 331694837 10362793 1031340..1032413 1 NC_015312.1 KEGG: amd:AMED_8047 translation-associated GTPase; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF 1032413 10362793 Psed_0971 Pseudonocardia dioxanivorans CB1190 GTP-binding protein YchF YP_004331076.1 1031340 D 675635 CDS YP_004331077.1 331694838 10362794 complement(1032482..1033753) 1 NC_015312.1 PFAM: Protein of unknown function DUF939; KEGG: gob:Gobs_2756 hypothetical protein; hypothetical protein 1033753 10362794 Psed_0972 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331077.1 1032482 R 675635 CDS YP_004331078.1 331694839 10362795 complement(1034104..1035777) 1 NC_015312.1 KEGG: cwo:Cwoe_0574 peptidase S15; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein 1035777 10362795 Psed_0973 Pseudonocardia dioxanivorans CB1190 hydrolase CocE/NonD family protein YP_004331078.1 1034104 R 675635 CDS YP_004331079.1 331694840 10362796 complement(1035799..1036515) 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: cti:RALTA_A1302 nitroreductase; nitroreductase 1036515 10362796 Psed_0974 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004331079.1 1035799 R 675635 CDS YP_004331080.1 331694841 10362797 complement(1036512..1037042) 1 NC_015312.1 KEGG: mno:Mnod_8468 hypothetical protein; hypothetical protein 1037042 10362797 Psed_0975 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331080.1 1036512 R 675635 CDS YP_004331081.1 331694842 10362798 1037143..1037772 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_3336 TetR family transcriptional regulator; TetR family transcriptional regulator 1037772 10362798 Psed_0976 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331081.1 1037143 D 675635 CDS YP_004331082.1 331694843 10362799 1038326..1038757 1 NC_015312.1 hypothetical protein 1038757 10362799 Psed_0977 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331082.1 1038326 D 675635 CDS YP_004331083.1 331694844 10362800 complement(1038723..1039742) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: nca:Noca_3005 luciferase protein; luciferase-like protein 1039742 10362800 Psed_0978 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331083.1 1038723 R 675635 CDS YP_004331084.1 331694845 10362801 complement(1039750..1041942) 1 NC_015312.1 PFAM: DNA helicase, UvrD/REP type; KEGG: amd:AMED_8980 helicase; UvrD/REP helicase 1041942 10362801 Psed_0979 Pseudonocardia dioxanivorans CB1190 UvrD/REP helicase YP_004331084.1 1039750 R 675635 CDS YP_004331085.1 331694846 10362803 complement(1042341..1042457) 1 NC_015312.1 hypothetical protein 1042457 10362803 Psed_0981 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331085.1 1042341 R 675635 CDS YP_004331086.1 331694847 10362804 complement(1043293..1043652) 1 NC_015312.1 KEGG: mgi:Mflv_3345 fibronectin-attachment family protein; fibronectin-attachment family protein 1043652 10362804 Psed_0982 Pseudonocardia dioxanivorans CB1190 fibronectin-attachment family protein YP_004331086.1 1043293 R 675635 CDS YP_004331087.1 331694848 10362805 1043961..1044266 1 NC_015312.1 KEGG: sro:Sros_8897 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 1044266 10362805 Psed_0983 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004331087.1 1043961 D 675635 CDS YP_004331088.1 331694849 10362806 1044259..1045161 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: saq:Sare_1540 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 1045161 10362806 Psed_0984 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004331088.1 1044259 D 675635 CDS YP_004331089.1 331694850 10362807 complement(1045139..1045735) 1 NC_015312.1 KEGG: amd:AMED_0964 deaminase-reductase domain-containing protein; deaminase-reductase domain-containing protein 1045735 10362807 Psed_0985 Pseudonocardia dioxanivorans CB1190 deaminase-reductase domain-containing protein YP_004331089.1 1045139 R 675635 CDS YP_004331090.1 331694851 10362808 complement(1045856..1046923) 1 NC_015312.1 TIGRFAM: DHAP synthase, class 1; KEGG: amd:AMED_2459 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1046923 10362808 Psed_0986 Pseudonocardia dioxanivorans CB1190 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004331090.1 1045856 R 675635 CDS YP_004331091.1 331694852 10362809 complement(1047117..1047728) 1 NC_015312.1 PFAM: Protein of unknown function DUF1470; KEGG: msm:MSMEG_6742 hypothetical protein; hypothetical protein 1047728 10362809 Psed_0987 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331091.1 1047117 R 675635 CDS YP_004331092.1 331694853 10362810 1047818..1048258 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msm:MSMEG_6743 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 1048258 10362810 Psed_0988 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331092.1 1047818 D 675635 CDS YP_004331093.1 331694854 10362811 complement(1048268..1048564) 1 NC_015312.1 PFAM: Transcriptional coactivator/pterin dehydratase; KEGG: rop:ROP_59910 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase 1048564 10362811 Psed_0989 Pseudonocardia dioxanivorans CB1190 transcriptional coactivator/pterin dehydratase YP_004331093.1 1048268 R 675635 CDS YP_004331094.1 331694855 10362812 complement(1048591..1049442) 1 NC_015312.1 KEGG: sen:SACE_0994 ABC transporter integral membrane protein; ABC transporter integral membrane protein 1049442 10362812 Psed_0990 Pseudonocardia dioxanivorans CB1190 ABC transporter integral membrane protein YP_004331094.1 1048591 R 675635 CDS YP_004331095.1 331694856 10362813 complement(1049442..1050422) 1 NC_015312.1 KEGG: ami:Amir_0751 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1050422 10362813 Psed_0991 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004331095.1 1049442 R 675635 CDS YP_004331096.1 331694857 10362814 complement(1050419..1051459) 1 NC_015312.1 KEGG: sen:SACE_0996 hypothetical protein; hypothetical protein 1051459 10362814 Psed_0992 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331096.1 1050419 R 675635 CDS YP_004331097.1 331694858 10362815 1051615..1052499 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 1052499 10362815 Psed_0993 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004331097.1 1051615 D 675635 CDS YP_004331098.1 331694859 10362816 1052584..1053270 1 NC_015312.1 KEGG: ami:Amir_0753 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 1053270 10362816 Psed_0994 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004331098.1 1052584 D 675635 CDS YP_004331099.1 331694860 10362817 1053267..1054586 1 NC_015312.1 KEGG: ami:Amir_0754 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 1054586 10362817 Psed_0995 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004331099.1 1053267 D 675635 CDS YP_004331100.1 331694861 10362818 1054583..1055446 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: sen:SACE_0999 hypothetical protein; NUDIX hydrolase 1055446 10362818 Psed_0996 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004331100.1 1054583 D 675635 CDS YP_004331101.1 331694862 10362819 1055664..1056473 1 NC_015312.1 KEGG: msm:MSMEG_5844 hypothetical protein; hypothetical protein 1056473 10362819 Psed_0997 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331101.1 1055664 D 675635 CDS YP_004331102.1 331694863 10362820 complement(1056606..1056755) 1 NC_015312.1 KEGG: cef:CE1010 hypothetical protein; hypothetical protein 1056755 10362820 Psed_0998 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331102.1 1056606 R 675635 CDS YP_004331103.1 331694864 10362821 1056819..1058756 1 NC_015312.1 TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: amd:AMED_8030 GTP-binding protein TypA; SMART: Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA 1058756 10362821 Psed_0999 Pseudonocardia dioxanivorans CB1190 GTP-binding protein TypA YP_004331103.1 1056819 D 675635 CDS YP_004331104.1 331694865 10362822 1058847..1060751 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ami:Amir_0760 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 1060751 10362822 Psed_1000 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331104.1 1058847 D 675635 CDS YP_004331105.1 331694866 10362823 1060989..1062692 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ols:Olsu_1266 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 1062692 10362823 Psed_1001 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331105.1 1060989 D 675635 CDS YP_004331106.1 331694867 10362824 1062759..1063691 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sti:Sthe_2953 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 1063691 10362824 Psed_1002 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331106.1 1062759 D 675635 CDS YP_004331107.1 331694868 10362825 1063775..1064746 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: gyc:GYMC61_1354 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 1064746 10362825 Psed_1003 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331107.1 1063775 D 675635 CDS YP_004331108.1 331694869 10362826 1064746..1066860 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: sro:Sros_1953 glutathione import ATP-binding protein GsiA; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 1066860 10362826 Psed_1004 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004331108.1 1064746 D 675635 CDS YP_004331109.1 331694870 10362827 1067034..1067909 1 NC_015312.1 KEGG: sen:SACE_1008 N-acetylglucosaminylphosphatidylinositol deacetylase; TIGRFAM: Mycothiol biosynthesis protein, MshB; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase 1067909 10362827 Psed_1005 Pseudonocardia dioxanivorans CB1190 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase YP_004331109.1 1067034 D 675635 CDS YP_004331110.1 331694871 10362828 1067906..1068265 1 NC_015312.1 KEGG: amd:AMED_8022 hypothetical protein; hypothetical protein 1068265 10362828 Psed_1006 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331110.1 1067906 D 675635 CDS YP_004331111.1 331694872 10362829 1068265..1069158 1 NC_015312.1 KEGG: amd:AMED_8021 hypothetical protein; hypothetical protein 1069158 10362829 Psed_1007 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331111.1 1068265 D 675635 CDS YP_004331112.1 331694873 10362830 complement(1069140..1070147) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_1024 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1070147 10362830 Psed_1008 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004331112.1 1069140 R 675635 CDS YP_004331113.1 331694874 10362831 1070284..1070610 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: sen:SACE_1010 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin 1070610 10362831 Psed_1009 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004331113.1 1070284 D 675635 CDS YP_004331114.1 331694875 10362832 1070607..1071725 1 NC_015312.1 TIGRFAM: Succinyldiaminopimelate transaminase, actinobacteria; KEGG: amd:AMED_1027 aminotransferase; PFAM: Aminotransferase, class I/classII; succinyldiaminopimelate transaminase 1071725 10362832 Psed_1010 Pseudonocardia dioxanivorans CB1190 succinyldiaminopimelate transaminase YP_004331114.1 1070607 D 675635 CDS YP_004331115.1 331694876 10362833 1071736..1072986 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4247 cyanate MFS transporter; major facilitator superfamily protein 1072986 10362833 Psed_1011 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331115.1 1071736 D 675635 CDS YP_004331116.1 331694877 10362834 complement(1072958..1073962) 1 NC_015312.1 KEGG: sen:SACE_1012 CHAD domain-containing protein; PFAM: CHAD; SMART: CHAD; CHAD domain-containing protein 1073962 10362834 Psed_1012 Pseudonocardia dioxanivorans CB1190 CHAD domain-containing protein YP_004331116.1 1072958 R 675635 CDS YP_004331117.1 331694878 10362835 complement(1074023..1075012) 1 NC_015312.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: tbi:Tbis_2652 tetrahydrodipicolinate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1075012 10362835 Psed_1013 Pseudonocardia dioxanivorans CB1190 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004331117.1 1074023 R 675635 CDS YP_004331118.1 331694879 10362836 1075047..1076174 1 NC_015312.1 TIGRFAM: Succinyl-diaminopimelate desuccinylase; KEGG: nml:Namu_4301 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; succinyl-diaminopimelate desuccinylase 1076174 10362836 Psed_1014 Pseudonocardia dioxanivorans CB1190 succinyl-diaminopimelate desuccinylase YP_004331118.1 1075047 D 675635 CDS YP_004331119.1 331694880 10362837 1076250..1077014 1 NC_015312.1 KEGG: sen:SACE_1020 lysine decarboxylase protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 1077014 10362837 Psed_1015 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331119.1 1076250 D 675635 CDS YP_004331120.1 331694881 10362838 1077014..1077601 1 NC_015312.1 KEGG: sen:SACE_1021 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 1077601 10362838 Psed_1016 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331120.1 1077014 D 675635 CDS YP_004331121.1 331694882 10362839 1077598..1078491 1 NC_015312.1 TIGRFAM: Dihydropteroate synthase; KEGG: req:REQ_14370 dihydropteroate synthase FolP2; PFAM: Pterin-binding; dihydropteroate synthase 1078491 10362839 Psed_1017 Pseudonocardia dioxanivorans CB1190 dihydropteroate synthase YP_004331121.1 1077598 D 675635 CDS YP_004331122.1 331694883 10362840 1078488..1079438 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: svi:Svir_06330 glucosyl-3-phosphoglycerate synthase; family 2 glycosyl transferase 1079438 10362840 Psed_1018 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004331122.1 1078488 D 675635 CDS YP_004331123.1 331694884 10362841 1079448..1080386 1 NC_015312.1 TIGRFAM: DivIVA domain; KEGG: sen:SACE_1026 hypothetical protein; DivIVA domain-containing protein 1080386 10362841 Psed_1019 Pseudonocardia dioxanivorans CB1190 DivIVA domain-containing protein YP_004331123.1 1079448 D 675635 CDS YP_004331124.1 331694885 10362842 1080383..1080865 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: amd:AMED_1058 hypothetical protein; polyketide cyclase/dehydrase 1080865 10362842 Psed_1020 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004331124.1 1080383 D 675635 CDS YP_004331125.1 331694886 10362843 1080862..1081422 1 NC_015312.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: sen:SACE_1027 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; DNA-3-methyladenine glycosylase I 1081422 10362843 Psed_1021 Pseudonocardia dioxanivorans CB1190 DNA-3-methyladenine glycosylase I YP_004331125.1 1080862 D 675635 CDS YP_004331126.1 331694887 10362844 1081606..1081773 1 NC_015312.1 KEGG: mil:ML5_0910 hypothetical protein; hypothetical protein 1081773 10362844 Psed_1022 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331126.1 1081606 D 675635 CDS YP_004331127.1 331694888 10362845 complement(1081823..1082029) 1 NC_015312.1 hypothetical protein 1082029 10362845 Psed_1023 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331127.1 1081823 R 675635 CDS YP_004331128.1 331694889 10362846 1082099..1082692 1 NC_015312.1 PFAM: Protein of unknown function DUF1470; KEGG: ami:Amir_3432 protein of unknown function DUF1470; hypothetical protein 1082692 10362846 Psed_1024 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331128.1 1082099 D 675635 CDS YP_004331129.1 331694890 10362847 complement(1082729..1083892) 1 NC_015312.1 KEGG: ami:Amir_0793 glycogen synthase; TIGRFAM: Glycogen synthase, corynebacterial; PFAM: Glycosyl transferase, group 1; glycogen synthase 1083892 10362847 Psed_1025 Pseudonocardia dioxanivorans CB1190 glycogen synthase YP_004331129.1 1082729 R 675635 CDS YP_004331130.1 331694891 10362848 1084100..1085350 1 NC_015312.1 PFAM: Nucleotidyl transferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase GlgC, bacterial; KEGG: ami:Amir_0794 glucose-1-phosphate adenylyltransferase; Glucose-1-phosphate adenylyltransferase 1085350 10362848 Psed_1026 Pseudonocardia dioxanivorans CB1190 Glucose-1-phosphate adenylyltransferase YP_004331130.1 1084100 D 675635 CDS YP_004331131.1 331694892 10362849 complement(1085381..1085935) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: nml:Namu_2155 O-methyltransferase 3; type 11 methyltransferase 1085935 10362849 Psed_1027 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331131.1 1085381 R 675635 CDS YP_004331132.1 331694893 10362850 1086174..1086839 1 NC_015312.1 KEGG: amd:AMED_1067 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1086839 10362850 Psed_1028 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331132.1 1086174 D 675635 CDS YP_004331133.1 331694894 10362851 1086836..1087546 1 NC_015312.1 KEGG: ami:Amir_0796 transmembrane anti-sigma factor; hypothetical protein 1087546 10362851 Psed_1029 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331133.1 1086836 D 675635 CDS YP_004331134.1 331694895 10362852 1087867..1089642 1 NC_015312.1 KEGG: sen:SACE_1034 possinble serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 1089642 10362852 Psed_1030 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004331134.1 1087867 D 675635 CDS YP_004331135.1 331694896 10362853 1089681..1090112 1 NC_015312.1 TIGRFAM: Twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; KEGG: ami:Amir_0798 sec-independent translocase; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; Sec-independent protein translocase tatB-like protein 1090112 10362853 Psed_1031 Pseudonocardia dioxanivorans CB1190 Sec-independent protein translocase tatB-like protein YP_004331135.1 1089681 D 675635 CDS YP_004331136.1 331694897 10362854 1090153..1090872 1 NC_015312.1 KEGG: amd:AMED_2325 transmembrane protein; transmembrane protein 1090872 10362854 Psed_1032 Pseudonocardia dioxanivorans CB1190 transmembrane protein YP_004331136.1 1090153 D 675635 CDS YP_004331137.1 331694898 10362855 complement(1090946..1092334) 1 NC_015312.1 PFAM: Amidase; KEGG: msm:MSMEG_2497 amidase; amidase 1092334 10362855 Psed_1033 Pseudonocardia dioxanivorans CB1190 amidase YP_004331137.1 1090946 R 675635 CDS YP_004331138.1 331694899 10362856 complement(1092331..1093275) 1 NC_015312.1 KEGG: sen:SACE_3772 D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; glyoxylate reductase 1093275 10362856 Psed_1034 Pseudonocardia dioxanivorans CB1190 glyoxylate reductase YP_004331138.1 1092331 R 675635 CDS YP_004331139.1 331694900 10362857 1093393..1093953 1 NC_015312.1 KEGG: nda:Ndas_4752 hypothetical protein; hypothetical protein 1093953 10362857 Psed_1035 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331139.1 1093393 D 675635 CDS YP_004331140.1 331694901 10362858 1093969..1094736 1 NC_015312.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: sen:SACE_3770 Asp/Glu racemase; Asp/Glu/hydantoin racemase 1094736 10362858 Psed_1036 Pseudonocardia dioxanivorans CB1190 Asp/Glu/hydantoin racemase YP_004331140.1 1093969 D 675635 CDS YP_004331141.1 331694902 10362859 1094771..1095505 1 NC_015312.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: sen:SACE_3769 decarboxylase; Asp/Glu/hydantoin racemase 1095505 10362859 Psed_1037 Pseudonocardia dioxanivorans CB1190 Asp/Glu/hydantoin racemase YP_004331141.1 1094771 D 675635 CDS YP_004331142.1 331694903 10362860 1095557..1096273 1 NC_015312.1 KEGG: nda:Ndas_4755 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 1096273 10362860 Psed_1038 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331142.1 1095557 D 675635 CDS YP_004331143.1 331694904 10362861 1096341..1097375 1 NC_015312.1 PFAM: Auxin efflux carrier; KEGG: sen:SACE_4307 transport integral membrane protein; auxin efflux carrier family protein 1097375 10362861 Psed_1039 Pseudonocardia dioxanivorans CB1190 auxin efflux carrier family protein YP_004331143.1 1096341 D 675635 CDS YP_004331144.1 331694905 10362862 1097508..1098764 1 NC_015312.1 KEGG: sen:SACE_3766 4-aminobutyrate transaminase; PFAM: Aminotransferase class-III; acetylornithine transaminase 1098764 10362862 Psed_1040 Pseudonocardia dioxanivorans CB1190 acetylornithine transaminase YP_004331144.1 1097508 D 675635 CDS YP_004331145.1 331694906 10362863 complement(1098822..1099976) 1 NC_015312.1 PFAM: ATPase-like, ParA/MinD; Domain of unknown function DUF59; KEGG: svi:Svir_06470 chromosome partitioning ATPase; ATPase-like protein 1099976 10362863 Psed_1041 Pseudonocardia dioxanivorans CB1190 ATPase-like protein YP_004331145.1 1098822 R 675635 CDS YP_004331146.1 331694907 10362864 1100125..1100619 1 NC_015312.1 manually curated; PFAM: HTH transcriptional regulator, MarR; KEGG: ami:Amir_0800 transcriptional regulator, MarR family; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 1100619 10362864 Psed_1042 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004331146.1 1100125 D 675635 CDS YP_004331147.1 331694908 10362865 complement(1100649..1101167) 1 NC_015312.1 PFAM: Protein of unknown function DUF1003; KEGG: amd:AMED_1072 hypothetical protein; hypothetical protein 1101167 10362865 Psed_1043 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331147.1 1100649 R 675635 CDS YP_004331148.1 331694909 10362866 complement(1101160..1102470) 1 NC_015312.1 KEGG: ami:Amir_0802 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular domain; PRC-barrel; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; MgtE integral membrane protein 1102470 10362866 Psed_1044 Pseudonocardia dioxanivorans CB1190 MgtE integral membrane protein YP_004331148.1 1101160 R 675635 CDS YP_004331149.1 331694910 10362867 1102521..1103408 1 NC_015312.1 KEGG: mau:Micau_0670 phenazine biosynthesis protein PhzF family; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family 1103408 10362867 Psed_1045 Pseudonocardia dioxanivorans CB1190 phenazine biosynthesis protein PhzF family YP_004331149.1 1102521 D 675635 CDS YP_004331150.1 331694911 10362868 1103558..1104517 1 NC_015312.1 KEGG: ami:Amir_0805 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain; citryl-CoA lyase 1104517 10362868 Psed_1046 Pseudonocardia dioxanivorans CB1190 citryl-CoA lyase YP_004331150.1 1103558 D 675635 CDS YP_004331151.1 331694912 10362869 1104560..1105753 1 NC_015312.1 KEGG: amd:AMED_1078 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 1105753 10362869 Psed_1047 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004331151.1 1104560 D 675635 CDS YP_004331152.1 331694913 10362870 1106064..1106600 1 NC_015312.1 KEGG: ami:Amir_0806 hypothetical protein; hypothetical protein 1106600 10362870 Psed_1048 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331152.1 1106064 D 675635 CDS YP_004331153.1 331694914 10362871 1106827..1108197 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: rop:ROP_60480 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 1108197 10362871 Psed_1049 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331153.1 1106827 D 675635 CDS YP_004331154.1 331694915 10362872 1108194..1109153 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_60490 ABC transporter permease; ABC transporter permease 1109153 10362872 Psed_1050 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331154.1 1108194 D 675635 CDS YP_004331155.1 331694916 10362873 1109168..1110004 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_1082 permease component of ABC-type sugar transport system; ABC transporter permease 1110004 10362873 Psed_1051 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331155.1 1109168 D 675635 CDS YP_004331156.1 331694917 10362874 1110012..1111211 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: ami:Amir_0810 ABC transporter related; SMART: ATPase, AAA+ type, core; glycerol-3-phosphate-transporting ATPase 1111211 10362874 Psed_1052 Pseudonocardia dioxanivorans CB1190 glycerol-3-phosphate-transporting ATPase YP_004331156.1 1110012 D 675635 CDS YP_004331157.1 331694918 10362875 1111500..1112168 1 NC_015312.1 KEGG: sgr:SGR_2953 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 1112168 10362875 Psed_1053 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331157.1 1111500 D 675635 CDS YP_004331158.1 331694919 10362876 1112172..1113182 1 NC_015312.1 TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; KEGG: sgr:SGR_2954 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; 1-aminocyclopropane-1-carboxylate deaminase 1113182 10362876 Psed_1054 Pseudonocardia dioxanivorans CB1190 1-aminocyclopropane-1-carboxylate deaminase YP_004331158.1 1112172 D 675635 CDS YP_004331159.1 331694920 10362877 1113273..1114583 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit 1114583 10362877 Psed_1055 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004331159.1 1113273 D 675635 CDS YP_004331160.1 331694921 10362878 complement(1114720..1115559) 1 NC_015312.1 KEGG: amd:AMED_1093 hypothetical protein; hypothetical protein 1115559 10362878 Psed_1056 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331160.1 1114720 R 675635 CDS YP_004331161.1 331694922 10362879 complement(1115564..1116211) 1 NC_015312.1 PFAM: Metallo-dependent phosphatase; KEGG: amd:AMED_1094 phosphoesterase; metallophosphoesterase 1116211 10362879 Psed_1057 Pseudonocardia dioxanivorans CB1190 metallophosphoesterase YP_004331161.1 1115564 R 675635 CDS YP_004331162.1 331694923 10362880 1116278..1117072 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: mjl:Mjls_5458 methyltransferase type 12; type 11 methyltransferase 1117072 10362880 Psed_1058 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331162.1 1116278 D 675635 CDS YP_004331163.1 331694924 10362881 complement(1117073..1118065) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: amd:AMED_4084 rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 1118065 10362881 Psed_1059 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004331163.1 1117073 R 675635 CDS YP_004331164.1 331694925 10362882 complement(1118084..1119187) 1 NC_015312.1 KEGG: sen:SACE_1051 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 1119187 10362882 Psed_1060 Pseudonocardia dioxanivorans CB1190 magnesium and cobalt transport protein CorA YP_004331164.1 1118084 R 675635 CDS YP_004331165.1 331694926 10362883 1119480..1119998 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: amd:AMED_1097 MaoC-like dehydratase; acyl dehydratase MaoC 1119998 10362883 Psed_1061 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004331165.1 1119480 D 675635 CDS YP_004331166.1 331694927 10362884 complement(1120012..1120407) 1 NC_015312.1 KEGG: amd:AMED_1099 NUDIX hydrolase; manually curated; PFAM: NUDIX hydrolase domain; NUDIX hydrolase 1120407 10362884 Psed_1062 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004331166.1 1120012 R 675635 CDS YP_004331167.1 331694928 10362885 1120509..1120667 1 NC_015312.1 KEGG: amd:AMED_1100 hypothetical protein; hypothetical protein 1120667 10362885 Psed_1063 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331167.1 1120509 D 675635 CDS YP_004331168.1 331694929 10362886 1120672..1121208 1 NC_015312.1 PFAM: Domain of unknown function DUF304l; KEGG: amd:AMED_1101 hypothetical protein; hypothetical protein 1121208 10362886 Psed_1064 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331168.1 1120672 D 675635 CDS YP_004331169.1 331694930 10362887 1121260..1122123 1 NC_015312.1 KEGG: ami:Amir_0820 PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 1122123 10362887 Psed_1065 Pseudonocardia dioxanivorans CB1190 PHP domain-containing protein YP_004331169.1 1121260 D 675635 CDS YP_004331170.1 331694931 10362888 1122167..1123057 1 NC_015312.1 KEGG: svi:Svir_06610 RecB family exonuclease; RecB family exonuclease 1123057 10362888 Psed_1066 Pseudonocardia dioxanivorans CB1190 RecB family exonuclease YP_004331170.1 1122167 D 675635 CDS YP_004331171.1 331694932 10362889 1123054..1123347 1 NC_015312.1 KEGG: amd:AMED_1106 hypothetical protein; hypothetical protein 1123347 10362889 Psed_1067 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331171.1 1123054 D 675635 CDS YP_004331172.1 331694933 10362890 complement(1123394..1124647) 1 NC_015312.1 KEGG: sen:SACE_1059 hypothetical protein; hypothetical protein 1124647 10362890 Psed_1068 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331172.1 1123394 R 675635 CDS YP_004331173.1 331694934 10362891 complement(1124651..1126516) 1 NC_015312.1 KEGG: ami:Amir_0824 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1126516 10362891 Psed_1069 Pseudonocardia dioxanivorans CB1190 DEAD/DEAH box helicase domain-containing protein YP_004331173.1 1124651 R 675635 CDS YP_004331174.1 331694935 10362892 1126793..1127452 1 NC_015312.1 KEGG: sen:SACE_1062 hypothetical protein; hypothetical protein 1127452 10362892 Psed_1070 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331174.1 1126793 D 675635 CDS YP_004331175.1 331694936 10362893 1127614..1127844 1 NC_015312.1 KEGG: rha:RHA1_ro06358 hypothetical protein; hypothetical protein 1127844 10362893 Psed_1071 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331175.1 1127614 D 675635 CDS YP_004331176.1 331694937 10362894 complement(1127908..1129848) 1 NC_015312.1 KEGG: cwo:Cwoe_0952 YhgE/Pip C-terminal domain protein; TIGRFAM: Phage infection protein, YhgE, C-terminal; Phage infection protein, YhgE, N-terminal; PFAM: ABC-2 type transporter; hypothetical protein 1129848 10362894 Psed_1072 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331176.1 1127908 R 675635 CDS YP_004331177.1 331694938 10362895 complement(1129879..1130553) 1 NC_015312.1 KEGG: sgr:SGR_5405 ABC transporter ATP-binding protein; hypothetical protein 1130553 10362895 Psed_1073 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331177.1 1129879 R 675635 CDS YP_004331178.1 331694939 10362896 complement(1130615..1130923) 1 NC_015312.1 KEGG: sen:SACE_1064 flavin binding monooxygenase; flavin binding monooxygenase 1130923 10362896 Psed_1074 Pseudonocardia dioxanivorans CB1190 flavin binding monooxygenase YP_004331178.1 1130615 R 675635 CDS YP_004331179.1 331694940 10362897 complement(1130920..1131741) 1 NC_015312.1 KEGG: ami:Amir_0828 transcriptional regulator, TetR family; manually curated; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator 1131741 10362897 Psed_1075 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331179.1 1130920 R 675635 CDS YP_004331180.1 331694941 10362898 1131792..1132697 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mil:ML5_5255 short-chain dehydrogenase/reductase sdr; short-chain dehydrogenase/reductase SDR 1132697 10362898 Psed_1076 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004331180.1 1131792 D 675635 CDS YP_004331181.1 331694942 10362899 1132694..1133593 1 NC_015312.1 KEGG: ami:Amir_0829 hypothetical protein; hypothetical protein 1133593 10362899 Psed_1077 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331181.1 1132694 D 675635 CDS YP_004331182.1 331694943 10362900 1133590..1134492 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sen:SACE_1067 alpha/beta hydrolase fold; alpha/beta hydrolase 1134492 10362900 Psed_1078 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331182.1 1133590 D 675635 CDS YP_004331183.1 331694944 10362901 complement(1134532..1135149) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_1068 TetR family transcriptional regulator; TetR family transcriptional regulator 1135149 10362901 Psed_1079 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331183.1 1134532 R 675635 CDS YP_004331184.1 331694945 10362902 complement(1135233..1137560) 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: amd:AMED_3510 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 1137560 10362902 Psed_1080 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004331184.1 1135233 R 675635 CDS YP_004331185.1 331694946 10362903 complement(1137560..1138540) 1 NC_015312.1 KEGG: sro:Sros_3700 hypothetical protein; hypothetical protein 1138540 10362903 Psed_1081 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331185.1 1137560 R 675635 CDS YP_004331186.1 331694947 10362904 1138702..1139796 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: svi:Svir_06730 predicted hydrolase or acyltransferase of alpha/beta superfamily; alpha/beta hydrolase 1139796 10362904 Psed_1082 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331186.1 1138702 D 675635 CDS YP_004331187.1 331694948 10362905 1139862..1141034 1 NC_015312.1 KEGG: ami:Amir_0833 molybdopterin biosynthesis-like protein MoeZ; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; UBA/THIF-type NAD/FAD binding protein 1141034 10362905 Psed_1083 Pseudonocardia dioxanivorans CB1190 UBA/THIF-type NAD/FAD binding protein YP_004331187.1 1139862 D 675635 CDS YP_004331188.1 331694949 10362906 complement(1141385..1142701) 1 NC_015312.1 KEGG: bld:BLi00801 hypothetical protein; hypothetical protein 1142701 10362906 Psed_1084 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331188.1 1141385 R 675635 CDS YP_004331189.1 331694950 10362907 1142766..1144028 1 NC_015312.1 KEGG: bmn:BMA10247_0522 hypothetical protein; hypothetical protein 1144028 10362907 Psed_1085 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331189.1 1142766 D 675635 CDS YP_004331190.1 331694951 10362908 1144186..1144938 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP02569; KEGG: ami:Amir_0834 aminoglycoside phosphotransferase; hypothetical protein 1144938 10362908 Psed_1086 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331190.1 1144186 D 675635 CDS YP_004331191.1 331694952 10362909 1145067..1146449 1 NC_015312.1 KEGG: sgr:SGR_4575 nitrate extrusion protein; TIGRFAM: Nitrate transporter; PFAM: Major facilitator superfamily MFS-1; nitrite transporter 1146449 10362909 Psed_1087 Pseudonocardia dioxanivorans CB1190 nitrite transporter YP_004331191.1 1145067 D 675635 CDS YP_004331192.1 331694953 10362910 1146512..1148572 1 NC_015312.1 PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; KEGG: amd:AMED_1121 nitrate reductase catalytic subunit; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; nitrate reductase 1148572 10362910 Psed_1088 Pseudonocardia dioxanivorans CB1190 nitrate reductase YP_004331192.1 1146512 D 675635 CDS YP_004331193.1 331694954 10362911 1148569..1150122 1 NC_015312.1 KEGG: ami:Amir_0836 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; nitrite reductase (NAD(P)H) 1150122 10362911 Psed_1089 Pseudonocardia dioxanivorans CB1190 nitrite reductase (NAD(P)H) YP_004331193.1 1148569 D 675635 CDS YP_004331194.1 331694955 10362912 1150119..1152656 1 NC_015312.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: ami:Amir_0838 nitrite reductase (NAD(P)H), large subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; nitrite reductase (NAD(P)H) large subunit 1152656 10362912 Psed_1090 Pseudonocardia dioxanivorans CB1190 nitrite reductase (NAD(P)H) large subunit YP_004331194.1 1150119 D 675635 CDS YP_004331195.1 331694956 10362913 1152653..1153036 1 NC_015312.1 KEGG: sro:Sros_5923 nitrite reductase (NAD(P)H); TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Rieske [2Fe-2S] iron-sulphur domain; nitrite reductase (NAD(P)H) small subunit 1153036 10362913 Psed_1091 Pseudonocardia dioxanivorans CB1190 nitrite reductase (NAD(P)H) small subunit YP_004331195.1 1152653 D 675635 CDS YP_004331196.1 331694957 10362914 1153033..1154223 1 NC_015312.1 KEGG: sma:SAV_5120 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; uroporphyrinogen III synthase HEM4 1154223 10362914 Psed_1092 Pseudonocardia dioxanivorans CB1190 uroporphyrinogen III synthase HEM4 YP_004331196.1 1153033 D 675635 CDS YP_004331197.1 331694958 10362915 1154220..1154891 1 NC_015312.1 PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: rop:ROP_64300 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 1154891 10362915 Psed_1093 Pseudonocardia dioxanivorans CB1190 cobalamin (vitamin B12) biosynthesis CbiX protein YP_004331197.1 1154220 D 675635 CDS YP_004331198.1 331694959 10362916 complement(1155037..1155318) 1 NC_015312.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: svi:Svir_06790 predicted methylated DNA-protein cysteine methyltransferase; methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein 1155318 10362916 Psed_1094 Pseudonocardia dioxanivorans CB1190 methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein YP_004331198.1 1155037 R 675635 CDS YP_004331199.1 331694960 10362917 complement(1155335..1156114) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rop:ROP_64360 hydrolase; alpha/beta hydrolase 1156114 10362917 Psed_1095 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331199.1 1155335 R 675635 CDS YP_004331200.1 331694961 10362918 1156255..1159575 1 NC_015312.1 PFAM: DNA helicase, UvrD/REP type; KEGG: ami:Amir_0852 UvrD/REP helicase; UvrD/REP helicase 1159575 10362918 Psed_1096 Pseudonocardia dioxanivorans CB1190 UvrD/REP helicase YP_004331200.1 1156255 D 675635 CDS YP_004331201.1 331694962 10362919 1159572..1163246 1 NC_015312.1 PFAM: DNA helicase, UvrD/REP type; KEGG: ami:Amir_0851 UvrD/REP helicase; UvrD/REP helicase 1163246 10362919 Psed_1097 Pseudonocardia dioxanivorans CB1190 UvrD/REP helicase YP_004331201.1 1159572 D 675635 CDS YP_004331202.1 331694963 10362920 complement(1163551..1163925) 1 NC_015312.1 KEGG: gob:Gobs_2005 DoxX family protein; DoxX family protein 1163925 10362920 Psed_1098 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004331202.1 1163551 R 675635 CDS YP_004331203.1 331694964 10362921 1164027..1164590 1 NC_015312.1 KEGG: ami:Amir_2612 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 1164590 10362921 Psed_1099 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004331203.1 1164027 D 675635 CDS YP_004331204.1 331694965 10362922 1164600..1165715 1 NC_015312.1 PFAM: Saccharopine dehydrogenase / Homospermidine synthase; KEGG: tbi:Tbis_3455 saccharopine dehydrogenase; saccharopine dehydrogenase 1165715 10362922 Psed_1100 Pseudonocardia dioxanivorans CB1190 saccharopine dehydrogenase YP_004331204.1 1164600 D 675635 CDS YP_004331205.1 331694966 10362923 1165767..1166825 1 NC_015312.1 PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; KEGG: sen:SACE_1081 transmembrane cation transporter; TrkA-N domain-containing protein 1166825 10362923 Psed_1101 Pseudonocardia dioxanivorans CB1190 TrkA-N domain-containing protein YP_004331205.1 1165767 D 675635 CDS YP_004331206.1 331694967 10362924 complement(1166848..1168038) 1 NC_015312.1 PFAM: ROK; KEGG: cai:Caci_6688 ROK family protein; ROK family protein 1168038 10362924 Psed_1102 Pseudonocardia dioxanivorans CB1190 ROK family protein YP_004331206.1 1166848 R 675635 CDS YP_004331207.1 331694968 10362925 complement(1168035..1169441) 1 NC_015312.1 TIGRFAM: Xylulokinase; KEGG: gob:Gobs_2984 xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; xylulokinase 1169441 10362925 Psed_1103 Pseudonocardia dioxanivorans CB1190 xylulokinase YP_004331207.1 1168035 R 675635 CDS YP_004331208.1 331694969 10362926 complement(1169530..1170717) 1 NC_015312.1 TIGRFAM: Xylose isomerase, actinobacteria; HAMAP: Xylose isomerase; KEGG: ace:Acel_2064 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; xylose isomerase 1170717 10362926 Psed_1104 Pseudonocardia dioxanivorans CB1190 xylose isomerase YP_004331208.1 1169530 R 675635 CDS YP_004331209.1 331694970 10362927 1170764..1171633 1 NC_015312.1 KEGG: gbr:Gbro_3810 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 1171633 10362927 Psed_1105 Pseudonocardia dioxanivorans CB1190 exodeoxyribonuclease III YP_004331209.1 1170764 D 675635 CDS YP_004331210.1 331694971 10362928 1171871..1172602 1 NC_015312.1 KEGG: kfl:Kfla_1919 hypothetical protein; hypothetical protein 1172602 10362928 Psed_1106 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331210.1 1171871 D 675635 CDS YP_004331211.1 331694972 10362929 1172602..1173261 1 NC_015312.1 PFAM: Peptidase C60, sortase A/B; KEGG: kra:Krad_3106 peptidase C60 sortase A and B; peptidase C60 sortase A and B 1173261 10362929 Psed_1107 Pseudonocardia dioxanivorans CB1190 peptidase C60 sortase A and B YP_004331211.1 1172602 D 675635 CDS YP_004331212.1 331694973 10362930 1173321..1174640 1 NC_015312.1 KEGG: svi:Svir_28610 gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase 1174640 10362930 Psed_1108 Pseudonocardia dioxanivorans CB1190 glutamate-5-semialdehyde dehydrogenase YP_004331212.1 1173321 D 675635 CDS YP_004331213.1 331694974 10362931 1174727..1175809 1 NC_015312.1 KEGG: fre:Franean1_0886 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 1175809 10362931 Psed_1109 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004331213.1 1174727 D 675635 CDS YP_004331214.1 331694975 10362932 1175846..1177138 1 NC_015312.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: svi:Svir_06870 predicted Zn-dependent peptidase; peptidase M16 domain-containing protein 1177138 10362932 Psed_1110 Pseudonocardia dioxanivorans CB1190 peptidase M16 domain-containing protein YP_004331214.1 1175846 D 675635 CDS YP_004331215.1 331694976 10362933 1177135..1178508 1 NC_015312.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: svi:Svir_06880 predicted Zn-dependent peptidase; peptidase M16 domain-containing protein 1178508 10362933 Psed_1111 Pseudonocardia dioxanivorans CB1190 peptidase M16 domain-containing protein YP_004331215.1 1177135 D 675635 CDS YP_004331216.1 331694977 10362934 1178505..1179503 1 NC_015312.1 KEGG: fal:FRAAL0398 NADH pyrophosphatase; PFAM: NUDIX hydrolase domain; Zinc ribbon, NADH pyrophosphatase; NADH pyrophosphatase-like, N-terminal; NAD(+) diphosphatase 1179503 10362934 Psed_1112 Pseudonocardia dioxanivorans CB1190 NAD(+) diphosphatase YP_004331216.1 1178505 D 675635 CDS YP_004331217.1 331694978 10362935 complement(1179576..1179824) 1 NC_015312.1 KEGG: cfl:Cfla_2470 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-like protein, actinobacteria; PFAM: Glutaredoxin; glutaredoxin-like protein 1179824 10362935 Psed_1113 Pseudonocardia dioxanivorans CB1190 glutaredoxin-like protein YP_004331217.1 1179576 R 675635 CDS YP_004331218.1 331694979 10362936 1179958..1182006 1 NC_015312.1 KEGG: amd:AMED_1233 ATP-dependent DNA helicase; PFAM: DNA helicase, UvrD/REP type; Helicase/RNase D C-terminal, HRDC domain; SMART: Helicase/RNase D C-terminal, HRDC domain; UvrD/REP helicase 1182006 10362936 Psed_1114 Pseudonocardia dioxanivorans CB1190 UvrD/REP helicase YP_004331218.1 1179958 D 675635 CDS YP_004331219.1 331694980 10362937 1182124..1182327 1 NC_015312.1 hypothetical protein 1182327 10362937 Psed_1115 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331219.1 1182124 D 675635 CDS YP_004331220.1 331694981 10362938 1182452..1182829 1 NC_015312.1 PFAM: Transcription factor WhiB; AT hook, DNA-binding motif; KEGG: sen:SACE_1093 WhiB-family transcriptional regulator; transcription factor WhiB 1182829 10362938 Psed_1116 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004331220.1 1182452 D 675635 CDS YP_004331221.1 331694982 10362939 1182877..1183140 1 NC_015312.1 hypothetical protein 1183140 10362939 Psed_1117 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331221.1 1182877 D 675635 CDS YP_004331222.1 331694983 10362940 complement(1183343..1184713) 1 NC_015312.1 PFAM: ABC-1; KEGG: sen:SACE_1096 ABC transporter ATP-binding protein; ABC transporter 1184713 10362940 Psed_1118 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004331222.1 1183343 R 675635 CDS YP_004331223.1 331694984 10362941 complement(1184674..1185714) 1 NC_015312.1 KEGG: amd:AMED_1241 hypothetical protein; hypothetical protein 1185714 10362941 Psed_1119 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331223.1 1184674 R 675635 CDS YP_004331224.1 331694985 10362942 1185859..1186503 1 NC_015312.1 KEGG: ami:Amir_0937 protein of unknown function DUF45; manually curated; PFAM: Protein of unknown function DUF45; hypothetical protein 1186503 10362942 Psed_1120 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331224.1 1185859 D 675635 CDS YP_004331225.1 331694986 10362943 complement(1186508..1188052) 1 NC_015312.1 KEGG: sen:SACE_1099 hypothetical protein; TIGRFAM: Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342; hypothetical protein 1188052 10362943 Psed_1121 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331225.1 1186508 R 675635 CDS YP_004331226.1 331694987 10362944 1188334..1191243 1 NC_015312.1 KEGG: amd:AMED_1246 hypothetical protein; HAMAP: Uncharacterised protein family UPF0182; PFAM: Uncharacterised protein family UPF0182; hypothetical protein 1191243 10362944 Psed_1122 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331226.1 1188334 D 675635 CDS YP_004331227.1 331694988 10362946 complement(1191633..1192973) 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: mmc:Mmcs_1422 phage integrase; integrase protein 1192973 10362946 Psed_1123 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004331227.1 1191633 R 675635 CDS YP_004331228.1 331694989 10362947 complement(1192970..1193251) 1 NC_015312.1 hypothetical protein 1193251 10362947 Psed_1124 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331228.1 1192970 R 675635 CDS YP_004331229.1 331694990 10362948 complement(1193399..1194535) 1 NC_015312.1 KEGG: stp:Strop_0060 hypothetical protein; hypothetical protein 1194535 10362948 Psed_1125 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331229.1 1193399 R 675635 CDS YP_004331230.1 331694991 10362949 complement(1194532..1195479) 1 NC_015312.1 KEGG: sen:SACE_1124 hypothetical protein; PFAM: DNA primase/polymerase, bifunctional, N-terminal; SMART: DNA primase/polymerase, bifunctional, N-terminal; bifunctional DNA primase/polymerase 1195479 10362949 Psed_1126 Pseudonocardia dioxanivorans CB1190 bifunctional DNA primase/polymerase YP_004331230.1 1194532 R 675635 CDS YP_004331231.1 331694992 10362950 complement(1195679..1197928) 1 NC_015312.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fre:Franean1_1448 cell divisionFtsK/SpoIIIE; DNA translocase FtsK 1197928 10362950 Psed_1127 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004331231.1 1195679 R 675635 CDS YP_004331232.1 331694993 10362951 complement(1197928..1198890) 1 NC_015312.1 KEGG: kfl:Kfla_0387 hypothetical protein; hypothetical protein 1198890 10362951 Psed_1128 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331232.1 1197928 R 675635 CDS YP_004331233.1 331694994 10362952 complement(1198887..1199210) 1 NC_015312.1 KEGG: ami:Amir_3643 hypothetical protein; hypothetical protein 1199210 10362952 Psed_1129 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331233.1 1198887 R 675635 CDS YP_004331234.1 331694995 10362953 complement(1199207..1199368) 1 NC_015312.1 hypothetical protein 1199368 10362953 Psed_1130 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331234.1 1199207 R 675635 CDS YP_004331235.1 331694996 10362954 complement(1199365..1199568) 1 NC_015312.1 hypothetical protein 1199568 10362954 Psed_1131 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331235.1 1199365 R 675635 CDS YP_004331236.1 331694997 10362955 1199760..1200617 1 NC_015312.1 KEGG: nfa:nfa7010 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 1200617 10362955 Psed_1132 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331236.1 1199760 D 675635 CDS YP_004331237.1 331694998 10362956 1200617..1201171 1 NC_015312.1 KEGG: nfa:nfa7000 kinase; kinase 1201171 10362956 Psed_1133 Pseudonocardia dioxanivorans CB1190 kinase YP_004331237.1 1200617 D 675635 CDS YP_004331238.1 331694999 10362957 1201360..1202118 1 NC_015312.1 hypothetical protein 1202118 10362957 Psed_1134 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331238.1 1201360 D 675635 CDS YP_004331239.1 331695000 10362958 complement(1202445..1203551) 1 NC_015312.1 KEGG: mbt:JTY_1402 hypothetical protein; PFAM: RelA/SpoT; SMART: RelA/SpoT; RelA/SpoT domain-containing protein 1203551 10362958 Psed_1135 Pseudonocardia dioxanivorans CB1190 RelA/SpoT domain-containing protein YP_004331239.1 1202445 R 675635 CDS YP_004331240.1 331695001 10362959 complement(1204344..1205819) 1 NC_015312.1 PFAM: Protein of unknown function DUF2252; KEGG: nml:Namu_2955 hypothetical protein; hypothetical protein 1205819 10362959 Psed_1136 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331240.1 1204344 R 675635 CDS YP_004331241.1 331695002 10362960 complement(1205943..1206500) 1 NC_015312.1 PFAM: Ion transport 2; KEGG: sma:SAV_3759 hypothetical protein; Ion transport 2 domain-containing protein 1206500 10362960 Psed_1137 Pseudonocardia dioxanivorans CB1190 Ion transport 2 domain-containing protein YP_004331241.1 1205943 R 675635 CDS YP_004331242.1 331695003 10362961 1206807..1207817 1 NC_015312.1 PFAM: Bile acid:sodium symporter; KEGG: mac:MA2632 transmembrane transport protein; bile acid:sodium symporter 1207817 10362961 Psed_1138 Pseudonocardia dioxanivorans CB1190 bile acid:sodium symporter YP_004331242.1 1206807 D 675635 CDS YP_004331243.1 331695004 10362962 complement(1208073..1209119) 1 NC_015312.1 KEGG: sro:Sros_4871 hypothetical protein; hypothetical protein 1209119 10362962 Psed_1139 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331243.1 1208073 R 675635 CDS YP_004331244.1 331695005 10362963 1209256..1210143 1 NC_015312.1 KEGG: sro:Sros_4872 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1210143 10362963 Psed_1140 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331244.1 1209256 D 675635 CDS YP_004331245.1 331695006 10362964 complement(1210222..1210857) 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sen:SACE_2518 hypothetical protein; bifunctional deaminase-reductase domain-containing protein 1210857 10362964 Psed_1141 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004331245.1 1210222 R 675635 CDS YP_004331246.1 331695007 10362968 1214360..1215592 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 1215592 10362968 Psed_1145 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004331246.1 1214360 D 675635 CDS YP_004331247.1 331695008 10362969 1216133..1217719 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 1217719 10362969 Psed_1146 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004331247.1 1216133 D 675635 CDS YP_004331248.1 331695009 10362970 1217716..1218507 1 NC_015312.1 KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1218507 10362970 Psed_1147 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004331248.1 1217716 D 675635 CDS YP_004331249.1 331695010 10362972 complement(1219073..1219705) 1 NC_015312.1 PFAM: ThiJ/PfpI; KEGG: cwo:Cwoe_5674 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 1219705 10362972 Psed_1149 Pseudonocardia dioxanivorans CB1190 ThiJ/PfpI domain-containing protein YP_004331249.1 1219073 R 675635 CDS YP_004331250.1 331695011 10362973 complement(1220813..1221760) 1 NC_015312.1 KEGG: scb:SCAB_78731 acyl-CoA dehydrogenase; hypothetical protein 1221760 10362973 Psed_1150 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331250.1 1220813 R 675635 CDS YP_004331251.1 331695012 10362974 complement(1221787..1223262) 1 NC_015312.1 KEGG: rha:RHA1_ro02683 succinate-semialdehyde dehydrogenase (NAD(P)+); PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase 1223262 10362974 Psed_1151 Pseudonocardia dioxanivorans CB1190 succinate-semialdehyde dehydrogenase YP_004331251.1 1221787 R 675635 CDS YP_004331252.1 331695013 10362975 complement(1223259..1224923) 1 NC_015312.1 KEGG: pde:Pden_4407 permease for cytosine/purines, uracil, thiamine, allantoin transporter; hypothetical protein 1224923 10362975 Psed_1152 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331252.1 1223259 R 675635 CDS YP_004331253.1 331695014 10362976 1225422..1227458 1 NC_015312.1 KEGG: sno:Snov_1568 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 1227458 10362976 Psed_1153 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004331253.1 1225422 D 675635 CDS YP_004331254.1 331695015 10362977 1227455..1229461 1 NC_015312.1 KEGG: msm:MSMEG_3973 N-methylhydantoinase; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 1229461 10362977 Psed_1154 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004331254.1 1227455 D 675635 CDS YP_004331255.1 331695016 10362978 1229547..1231064 1 NC_015312.1 KEGG: rme:Rmet_1316 methane/phenol/toluene hydroxylase; PFAM: Methane/phenol/toluene hydroxylase; YHS; phenol 2-monooxygenase 1231064 10362978 Psed_1155 Pseudonocardia dioxanivorans CB1190 phenol 2-monooxygenase YP_004331255.1 1229547 D 675635 CDS YP_004331256.1 331695017 10362979 1231113..1231385 1 NC_015312.1 hypothetical protein 1231385 10362979 Psed_1156 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331256.1 1231113 D 675635 CDS YP_004331257.1 331695018 10362980 1231445..1231798 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rme:Rmet_1314 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1231798 10362980 Psed_1157 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004331257.1 1231445 D 675635 CDS YP_004331258.1 331695019 10362981 1231833..1232135 1 NC_015312.1 PFAM: Monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5676 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 1232135 10362981 Psed_1158 Pseudonocardia dioxanivorans CB1190 monooxygenase component MmoB/DmpM YP_004331258.1 1231833 D 675635 CDS YP_004331259.1 331695020 10362982 1232166..1233185 1 NC_015312.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: rme:Rmet_1312 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 1233185 10362982 Psed_1159 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004331259.1 1232166 D 675635 CDS YP_004331260.1 331695021 10362983 1233328..1234965 1 NC_015312.1 KEGG: msm:MSMEG_3975 regulatory protein; transcriptional regulator CdaR 1234965 10362983 Psed_1160 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004331260.1 1233328 D 675635 CDS YP_004331261.1 331695022 10362984 complement(1235064..1235993) 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fal:FRAAL4441 LysR-type transcriptional regulator; LysR family transcriptional regulator 1235993 10362984 Psed_1161 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004331261.1 1235064 R 675635 CDS YP_004331262.1 331695023 10362985 1236015..1236737 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL4440 keto acyl reductase; short-chain dehydrogenase/reductase SDR 1236737 10362985 Psed_1162 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004331262.1 1236015 D 675635 CDS YP_004331263.1 331695024 10362986 1236775..1237068 1 NC_015312.1 SMART: HTH transcriptional regulator, ArsR; KEGG: nfa:nfa28340 transcriptional regulator; regulatory protein ArsR 1237068 10362986 Psed_1163 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004331263.1 1236775 D 675635 CDS YP_004331264.1 331695025 10362987 1237065..1237454 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sen:SACE_4482 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1237454 10362987 Psed_1164 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331264.1 1237065 D 675635 CDS YP_004331265.1 331695026 10362989 complement(1238120..1238917) 1 NC_015312.1 KEGG: sna:Snas_1610 hypothetical protein; hypothetical protein 1238917 10362989 Psed_1166 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331265.1 1238120 R 675635 CDS YP_004331266.1 331695027 10362990 1239232..1240512 1 NC_015312.1 PFAM: Protein of unknown function DUF2088; KEGG: gob:Gobs_1559 hypothetical protein; hypothetical protein 1240512 10362990 Psed_1167 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331266.1 1239232 D 675635 CDS YP_004331267.1 331695028 10362991 complement(1240546..1241409) 1 NC_015312.1 KEGG: gob:Gobs_0783 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1241409 10362991 Psed_1168 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331267.1 1240546 R 675635 CDS YP_004331268.1 331695029 10362992 complement(1241475..1241636) 1 NC_015312.1 hypothetical protein 1241636 10362992 Psed_1169 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331268.1 1241475 R 675635 CDS YP_004331269.1 331695030 10362993 1241736..1242494 1 NC_015312.1 PFAM: Bacterial transcriptional activator domain; KEGG: cwo:Cwoe_4257 transcriptional regulator, SARP family; SARP family transcriptional regulator 1242494 10362993 Psed_1170 Pseudonocardia dioxanivorans CB1190 SARP family transcriptional regulator YP_004331269.1 1241736 D 675635 CDS YP_004331270.1 331695031 10362994 1242491..1242733 1 NC_015312.1 PFAM: RNA-binding S4; KEGG: amd:AMED_0251 RNA-binding S4 domain-containing protein; RNA-binding S4 domain-containing protein 1242733 10362994 Psed_1171 Pseudonocardia dioxanivorans CB1190 RNA-binding S4 domain-containing protein YP_004331270.1 1242491 D 675635 CDS YP_004331271.1 331695032 10362995 complement(1242759..1244801) 1 NC_015312.1 PFAM: Acyltransferase 3; KEGG: svi:Svir_21020 predicted acyltransferase; acyltransferase 1244801 10362995 Psed_1172 Pseudonocardia dioxanivorans CB1190 acyltransferase YP_004331271.1 1242759 R 675635 CDS YP_004331272.1 331695033 10362996 complement(1244921..1245730) 1 NC_015312.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: cai:Caci_0731 lytic transglycosylase catalytic; Lytic transglycosylase catalytic 1245730 10362996 Psed_1173 Pseudonocardia dioxanivorans CB1190 Lytic transglycosylase catalytic YP_004331272.1 1244921 R 675635 CDS YP_004331273.1 331695034 10362997 complement(1246149..1247216) 1 NC_015312.1 PFAM: Queuosine biosynthesis protein; KEGG: fri:FraEuI1c_5020 queuosine biosynthesis protein; Queuosine biosynthesis protein 1247216 10362997 Psed_1174 Pseudonocardia dioxanivorans CB1190 Queuosine biosynthesis protein YP_004331273.1 1246149 R 675635 CDS YP_004331274.1 331695035 10362998 complement(1247213..1247914) 1 NC_015312.1 KEGG: amd:AMED_1538 short-chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 1247914 10362998 Psed_1175 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004331274.1 1247213 R 675635 CDS YP_004331275.1 331695036 10362999 1247968..1248438 1 NC_015312.1 TIGRFAM: Redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: fre:Franean1_1287 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 1248438 10362999 Psed_1176 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004331275.1 1247968 D 675635 CDS YP_004331276.1 331695037 10363000 1248524..1248847 1 NC_015312.1 PFAM: NIPSNAP; KEGG: bra:BRADO4102 hypothetical protein; NIPSNAP family containing protein 1248847 10363000 Psed_1177 Pseudonocardia dioxanivorans CB1190 NIPSNAP family containing protein YP_004331276.1 1248524 D 675635 CDS YP_004331277.1 331695038 10363001 1248893..1249699 1 NC_015312.1 KEGG: dre:100332356 GTPase, IMAP family member 4-like; hypothetical protein 1249699 10363001 Psed_1178 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331277.1 1248893 D 675635 CDS YP_004331278.1 331695039 10363002 1249719..1250456 1 NC_015312.1 KEGG: gob:Gobs_4846 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 1250456 10363002 Psed_1179 Pseudonocardia dioxanivorans CB1190 protein tyrosine/serine phosphatase YP_004331278.1 1249719 D 675635 CDS YP_004331279.1 331695040 10363003 complement(1250467..1250859) 1 NC_015312.1 KEGG: tbi:Tbis_3044 hypothetical protein; hypothetical protein 1250859 10363003 Psed_1180 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331279.1 1250467 R 675635 CDS YP_004331280.1 331695041 10363004 complement(1250866..1251111) 1 NC_015312.1 hypothetical protein 1251111 10363004 Psed_1181 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331280.1 1250866 R 675635 CDS YP_004331281.1 331695042 10363005 1251227..1252408 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: fre:Franean1_5603 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 1252408 10363005 Psed_1182 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004331281.1 1251227 D 675635 CDS YP_004331282.1 331695043 10363006 1252417..1253430 1 NC_015312.1 PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: fri:FraEuI1c_1232 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 1253430 10363006 Psed_1183 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004331282.1 1252417 D 675635 CDS YP_004331283.1 331695044 10363007 1253513..1254022 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: sen:SACE_1104 PadR family transcriptional regulator; PadR family transcriptional regulator 1254022 10363007 Psed_1184 Pseudonocardia dioxanivorans CB1190 PadR family transcriptional regulator YP_004331283.1 1253513 D 675635 CDS YP_004331284.1 331695045 10363008 1254055..1255164 1 NC_015312.1 SMART: Peptide chain release factor; TIGRFAM: Peptide chain release factor 2; KEGG: ami:Amir_0944 peptide chain release factor 2; HAMAP: Peptide chain release factor 2, bacterial; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; peptide chain release factor 2 1255164 10363008 Psed_1185 Pseudonocardia dioxanivorans CB1190 peptide chain release factor 2 YP_004331284.1 1254055 D 675635 CDS YP_004331285.1 331695046 10363009 1255177..1256022 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: sen:SACE_1106 cell division ATP-binding protein; PFAM: ABC transporter-like; cell division ATP-binding protein FtsE 1256022 10363009 Psed_1186 Pseudonocardia dioxanivorans CB1190 cell division ATP-binding protein FtsE YP_004331285.1 1255177 D 675635 CDS YP_004331286.1 331695047 10363010 1256061..1256963 1 NC_015312.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: sen:SACE_1107 cell division membrane protein; hypothetical protein 1256963 10363010 Psed_1187 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331286.1 1256061 D 675635 CDS YP_004331287.1 331695048 10363011 1256995..1257480 1 NC_015312.1 TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: svi:Svir_07720 SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 1257480 10363011 Psed_1188 Pseudonocardia dioxanivorans CB1190 SsrA-binding protein YP_004331287.1 1256995 D 675635 CDS YP_004331288.1 331695049 10363012 1257477..1258382 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: sen:SACE_1109 hypothetical protein; amidohydrolase 1258382 10363012 Psed_1189 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004331288.1 1257477 D 675635 CDS YP_004331289.1 331695050 10363014 1259060..1260436 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: art:Arth_2493 major facilitator transporter; major facilitator superfamily protein 1260436 10363014 Psed_1190 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331289.1 1259060 D 675635 CDS YP_004331290.1 331695051 10363015 complement(1260486..1262174) 1 NC_015312.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: cai:Caci_6447 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 1262174 10363015 Psed_1191 Pseudonocardia dioxanivorans CB1190 xanthine/uracil/vitamin C permease YP_004331290.1 1260486 R 675635 CDS YP_004331291.1 331695052 10363016 complement(1262171..1262857) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: fri:FraEuI1c_3512 isochorismatase hydrolase; isochorismatase hydrolase 1262857 10363016 Psed_1192 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004331291.1 1262171 R 675635 CDS YP_004331292.1 331695053 10363017 complement(1262854..1263588) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: cms:CMS_2996 isochorismatase hydrolase; isochorismatase hydrolase 1263588 10363017 Psed_1193 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004331292.1 1262854 R 675635 CDS YP_004331293.1 331695054 10363018 complement(1263585..1264970) 1 NC_015312.1 KEGG: met:M446_3691 allophanate hydrolase; PFAM: Amidase; allophanate hydrolase 1264970 10363018 Psed_1194 Pseudonocardia dioxanivorans CB1190 allophanate hydrolase YP_004331293.1 1263585 R 675635 CDS YP_004331294.1 331695055 10363019 complement(1265032..1265721) 1 NC_015312.1 KEGG: nml:Namu_2025 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 1265721 10363019 Psed_1195 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331294.1 1265032 R 675635 CDS YP_004331295.1 331695056 10363020 complement(1265797..1266519) 1 NC_015312.1 PFAM: Domain of unknown function DUF125, transmembrane; KEGG: mil:ML5_1718 hypothetical protein; hypothetical protein 1266519 10363020 Psed_1196 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331295.1 1265797 R 675635 CDS YP_004331296.1 331695057 10363021 1266674..1267558 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 1267558 10363021 Psed_1197 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004331296.1 1266674 D 675635 CDS YP_004331297.1 331695058 10363022 1267745..1268245 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: svi:Svir_07800 DoxX protein; DoxX family protein 1268245 10363022 Psed_1198 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004331297.1 1267745 D 675635 CDS YP_004331298.1 331695059 10363023 1268247..1269002 1 NC_015312.1 KEGG: ami:Amir_0955 protein-disulfide isomerase-like protein; protein-disulfide isomerase-like protein 1269002 10363023 Psed_1199 Pseudonocardia dioxanivorans CB1190 protein-disulfide isomerase-like protein YP_004331298.1 1268247 D 675635 CDS YP_004331299.1 331695060 10363024 complement(1269063..1271045) 1 NC_015312.1 KEGG: sti:Sthe_0743 peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase active site domain-containing protein 1271045 10363024 Psed_1200 Pseudonocardia dioxanivorans CB1190 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_004331299.1 1269063 R 675635 CDS YP_004331300.1 331695061 10363025 complement(1271060..1272124) 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 1272124 10363025 Psed_1201 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004331300.1 1271060 R 675635 CDS YP_004331301.1 331695062 10363027 complement(1272472..1274250) 1 NC_015312.1 KEGG: fra:Francci3_0910 recombinase; PFAM: Resolvase, N-terminal; Recombinase; SMART: Resolvase, N-terminal; resolvase domain-containing protein 1274250 10363027 Psed_1202 Pseudonocardia dioxanivorans CB1190 resolvase domain-containing protein YP_004331301.1 1272472 R 675635 CDS YP_004331302.1 331695063 10363028 complement(1274365..1274661) 1 NC_015312.1 hypothetical protein 1274661 10363028 Psed_1203 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331302.1 1274365 R 675635 CDS YP_004331303.1 331695064 10363029 complement(1274731..1275834) 1 NC_015312.1 KEGG: fra:Francci3_1684 resolvase-like protein; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal; resolvase domain-containing protein 1275834 10363029 Psed_1204 Pseudonocardia dioxanivorans CB1190 resolvase domain-containing protein YP_004331303.1 1274731 R 675635 CDS YP_004331304.1 331695065 10363030 1276278..1276556 1 NC_015312.1 KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator 1276556 10363030 Psed_1205 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004331304.1 1276278 D 675635 CDS YP_004331305.1 331695066 10363031 complement(1276586..1277374) 1 NC_015312.1 KEGG: cai:Caci_9004 hypothetical protein; hypothetical protein 1277374 10363031 Psed_1206 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331305.1 1276586 R 675635 CDS YP_004331306.1 331695067 10363032 complement(1277371..1277898) 1 NC_015312.1 PFAM: Protein of unknown function DUF165; KEGG: kra:Krad_4383 protein of unknown function DUF165; hypothetical protein 1277898 10363032 Psed_1207 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331306.1 1277371 R 675635 CDS YP_004331307.1 331695068 10363033 complement(1277895..1278689) 1 NC_015312.1 PFAM: Recombinase; KEGG: fre:Franean1_2733 recombinase; recombinase 1278689 10363033 Psed_1208 Pseudonocardia dioxanivorans CB1190 recombinase YP_004331307.1 1277895 R 675635 CDS YP_004331308.1 331695069 10363034 complement(1278686..1279579) 1 NC_015312.1 PFAM: DNA methylase N-4/N-6; KEGG: cai:Caci_4087 RNA methylase; DNA methylase N-4/N-6 domain-containing protein 1279579 10363034 Psed_1209 Pseudonocardia dioxanivorans CB1190 DNA methylase N-4/N-6 domain-containing protein YP_004331308.1 1278686 R 675635 CDS YP_004331309.1 331695070 10363035 complement(1279632..1280624) 1 NC_015312.1 KEGG: fre:Franean1_2543 hypothetical protein; hypothetical protein 1280624 10363035 Psed_1210 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331309.1 1279632 R 675635 CDS YP_004331310.1 331695071 10363036 1280848..1282059 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_0075 transposase; transposase IS111A/IS1328/IS1533 1282059 10363036 Psed_1211 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004331310.1 1280848 D 675635 CDS YP_004331311.1 331695072 10363037 1282612..1283589 1 NC_015312.1 KEGG: fre:Franean1_2740 hypothetical protein; hypothetical protein 1283589 10363037 Psed_1212 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331311.1 1282612 D 675635 CDS YP_004331312.1 331695073 10363038 1283580..1284089 1 NC_015312.1 KEGG: fre:Franean1_2741 hypothetical protein; hypothetical protein 1284089 10363038 Psed_1213 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331312.1 1283580 D 675635 CDS YP_004331313.1 331695074 10363039 1284093..1286183 1 NC_015312.1 KEGG: fre:Franean1_2742 hypothetical protein; hypothetical protein 1286183 10363039 Psed_1214 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331313.1 1284093 D 675635 CDS YP_004331314.1 331695075 10363040 1286180..1287415 1 NC_015312.1 KEGG: fre:Franean1_2547 hypothetical protein; hypothetical protein 1287415 10363040 Psed_1215 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331314.1 1286180 D 675635 CDS YP_004331315.1 331695076 10363041 1287412..1289322 1 NC_015312.1 KEGG: fra:Francci3_1693 type IV secretory pathway VirB4 components-like protein; type IV secretory pathway VirB4 components-like protein 1289322 10363041 Psed_1216 Pseudonocardia dioxanivorans CB1190 type IV secretory pathway VirB4 components-like protein YP_004331315.1 1287412 D 675635 CDS YP_004331316.1 331695077 10363042 1289379..1290224 1 NC_015312.1 KEGG: cai:Caci_9005 hypothetical protein; hypothetical protein 1290224 10363042 Psed_1217 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331316.1 1289379 D 675635 CDS YP_004331317.1 331695078 10363043 1290274..1292817 1 NC_015312.1 KEGG: fre:Franean1_2549 hypothetical protein; hypothetical protein 1292817 10363043 Psed_1218 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331317.1 1290274 D 675635 CDS YP_004331318.1 331695079 10363044 1292946..1293989 1 NC_015312.1 KEGG: fra:Francci3_2715 hypothetical protein; hypothetical protein 1293989 10363044 Psed_1219 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331318.1 1292946 D 675635 CDS YP_004331319.1 331695080 10363045 1293994..1294950 1 NC_015312.1 PFAM: NLP/P60; Lytic transglycosylase-like, catalytic; KEGG: amd:AMED_7298 NLP/P60 protein; NLP/P60 protein 1294950 10363045 Psed_1220 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004331319.1 1293994 D 675635 CDS YP_004331320.1 331695081 10363046 complement(1295035..1296147) 1 NC_015312.1 KEGG: vvy:VV2237 hypothetical protein; hypothetical protein 1296147 10363046 Psed_1221 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331320.1 1295035 R 675635 CDS YP_004331321.1 331695082 10363047 complement(1296335..1297318) 1 NC_015312.1 manually curated; KEGG: ank:AnaeK_3342 hypothetical protein; hypothetical protein 1297318 10363047 Psed_1222 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331321.1 1296335 R 675635 CDS YP_004331322.1 331695083 10363048 complement(1297352..1297630) 1 NC_015312.1 hypothetical protein 1297630 10363048 Psed_1223 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331322.1 1297352 R 675635 CDS YP_004331323.1 331695084 10363049 complement(1297796..1298584) 1 NC_015312.1 PFAM: Protein of unknown function DUF45; KEGG: fal:FRAAL4995 hypothetical protein; hypothetical protein 1298584 10363049 Psed_1224 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331323.1 1297796 R 675635 CDS YP_004331324.1 331695085 10363050 complement(1298581..1299459) 1 NC_015312.1 KEGG: svi:Svir_09850 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 1299459 10363050 Psed_1225 Pseudonocardia dioxanivorans CB1190 DNA protecting protein DprA YP_004331324.1 1298581 R 675635 CDS YP_004331325.1 331695086 10363051 complement(1299530..1300330) 1 NC_015312.1 hypothetical protein 1300330 10363051 Psed_1226 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331325.1 1299530 R 675635 CDS YP_004331326.1 331695087 10363052 complement(1300372..1300842) 1 NC_015312.1 hypothetical protein 1300842 10363052 Psed_1227 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331326.1 1300372 R 675635 CDS YP_004331327.1 331695088 10363053 complement(1300847..1301680) 1 NC_015312.1 KEGG: msp:Mspyr1_55350 hypothetical protein; hypothetical protein 1301680 10363053 Psed_1228 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331327.1 1300847 R 675635 CDS YP_004331328.1 331695089 10363054 complement(1301740..1302267) 1 NC_015312.1 KEGG: fre:Franean1_2565 hypothetical protein; hypothetical protein 1302267 10363054 Psed_1229 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331328.1 1301740 R 675635 CDS YP_004331329.1 331695090 10363055 complement(1302393..1303643) 1 NC_015312.1 PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: mea:Mex_2p1281 hypothetical protein; phosphoadenosine phosphosulfate reductase 1303643 10363055 Psed_1230 Pseudonocardia dioxanivorans CB1190 phosphoadenosine phosphosulfate reductase YP_004331329.1 1302393 R 675635 CDS YP_004331330.1 331695091 10363056 complement(1303760..1304026) 1 NC_015312.1 hypothetical protein 1304026 10363056 Psed_1231 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331330.1 1303760 R 675635 CDS YP_004331331.1 331695092 10363057 complement(1304146..1304577) 1 NC_015312.1 hypothetical protein 1304577 10363057 Psed_1232 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331331.1 1304146 R 675635 CDS YP_004331332.1 331695093 10363058 complement(1304693..1305076) 1 NC_015312.1 hypothetical protein 1305076 10363058 Psed_1233 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331332.1 1304693 R 675635 CDS YP_004331333.1 331695094 10363059 complement(1305119..1305934) 1 NC_015312.1 KEGG: kra:Krad_4685 hypothetical protein; hypothetical protein 1305934 10363059 Psed_1234 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331333.1 1305119 R 675635 CDS YP_004331334.1 331695095 10363060 complement(1305941..1306498) 1 NC_015312.1 hypothetical protein 1306498 10363060 Psed_1235 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331334.1 1305941 R 675635 CDS YP_004331335.1 331695096 10363061 complement(1306532..1307119) 1 NC_015312.1 hypothetical protein 1307119 10363061 Psed_1236 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331335.1 1306532 R 675635 CDS YP_004331336.1 331695097 10363062 complement(1307216..1307800) 1 NC_015312.1 hypothetical protein 1307800 10363062 Psed_1237 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331336.1 1307216 R 675635 CDS YP_004331337.1 331695098 10363063 complement(1307941..1308816) 1 NC_015312.1 hypothetical protein 1308816 10363063 Psed_1238 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331337.1 1307941 R 675635 CDS YP_004331338.1 331695099 10363064 complement(1308878..1309447) 1 NC_015312.1 hypothetical protein 1309447 10363064 Psed_1239 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331338.1 1308878 R 675635 CDS YP_004331339.1 331695100 10363065 complement(1309633..1309941) 1 NC_015312.1 hypothetical protein 1309941 10363065 Psed_1240 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331339.1 1309633 R 675635 CDS YP_004331340.1 331695101 10363066 complement(1309993..1310292) 1 NC_015312.1 hypothetical protein 1310292 10363066 Psed_1241 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331340.1 1309993 R 675635 CDS YP_004331341.1 331695102 10363067 complement(1310315..1311130) 1 NC_015312.1 hypothetical protein 1311130 10363067 Psed_1242 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331341.1 1310315 R 675635 CDS YP_004331342.1 331695103 10363068 complement(1311145..1311432) 1 NC_015312.1 KEGG: rer:RER_24790 hypothetical protein; hypothetical protein 1311432 10363068 Psed_1243 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331342.1 1311145 R 675635 CDS YP_004331343.1 331695104 10363069 complement(1311449..1311844) 1 NC_015312.1 KEGG: rci:RCIX1357 hypothetical protein; hypothetical protein 1311844 10363069 Psed_1244 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331343.1 1311449 R 675635 CDS YP_004331344.1 331695105 10363071 1313834..1314556 1 NC_015312.1 KEGG: fre:Franean1_2833 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 1314556 10363071 Psed_1246 Pseudonocardia dioxanivorans CB1190 Ribulose-phosphate 3-epimerase YP_004331344.1 1313834 D 675635 CDS YP_004331345.1 331695106 10363072 1314553..1315299 1 NC_015312.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: fre:Franean1_2832 HAD family hydrolase; haloacid dehalogenase 1315299 10363072 Psed_1247 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004331345.1 1314553 D 675635 CDS YP_004331346.1 331695107 10363073 1315329..1316204 1 NC_015312.1 KEGG: fre:Franean1_2831 hypothetical protein; hypothetical protein 1316204 10363073 Psed_1248 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331346.1 1315329 D 675635 CDS YP_004331347.1 331695108 10363074 1316201..1317388 1 NC_015312.1 KEGG: fre:Franean1_2830 hypothetical protein; hypothetical protein 1317388 10363074 Psed_1249 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331347.1 1316201 D 675635 CDS YP_004331348.1 331695109 10363075 1317385..1318230 1 NC_015312.1 KEGG: fre:Franean1_2829 hypothetical protein; hypothetical protein 1318230 10363075 Psed_1250 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331348.1 1317385 D 675635 CDS YP_004331349.1 331695110 10363076 1318227..1318805 1 NC_015312.1 KEGG: fre:Franean1_2828 hypothetical protein; hypothetical protein 1318805 10363076 Psed_1251 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331349.1 1318227 D 675635 CDS YP_004331350.1 331695111 10363077 1318802..1319626 1 NC_015312.1 PFAM: Inositol monophosphatase; KEGG: kfl:Kfla_6457 inositol monophosphatase; inositol monophosphatase 1319626 10363077 Psed_1252 Pseudonocardia dioxanivorans CB1190 inositol monophosphatase YP_004331350.1 1318802 D 675635 CDS YP_004331351.1 331695112 10363078 1319620..1321329 1 NC_015312.1 KEGG: fre:Franean1_2827 aminoglycoside phosphotransferase; HAMAP: Thymidylate kinase; PFAM: Aminoglycoside phosphotransferase; thymidylate kinase 1321329 10363078 Psed_1253 Pseudonocardia dioxanivorans CB1190 thymidylate kinase YP_004331351.1 1319620 D 675635 CDS YP_004331352.1 331695113 10363079 complement(1321331..1321621) 1 NC_015312.1 KEGG: sna:Snas_4860 NUDIX hydrolase; hypothetical protein 1321621 10363079 Psed_1254 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331352.1 1321331 R 675635 CDS YP_004331353.1 331695114 10363080 1322087..1323133 1 NC_015312.1 KEGG: mav:MAV_1971 hypothetical protein; hypothetical protein 1323133 10363080 Psed_1255 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331353.1 1322087 D 675635 CDS YP_004331354.1 331695115 10363081 1323329..1324867 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mav:MAV_3533 transposase; integrase catalytic subunit 1324867 10363081 Psed_1256 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004331354.1 1323329 D 675635 CDS YP_004331355.1 331695116 10363082 1324864..1325643 1 NC_015312.1 KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1325643 10363082 Psed_1257 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004331355.1 1324864 D 675635 CDS YP_004331356.1 331695117 10363083 1325885..1326550 1 NC_015312.1 hypothetical protein 1326550 10363083 Psed_1258 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331356.1 1325885 D 675635 CDS YP_004331357.1 331695118 10363084 1327356..1328339 1 NC_015312.1 hypothetical protein 1328339 10363084 Psed_1259 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331357.1 1327356 D 675635 CDS YP_004331358.1 331695119 10363085 1328324..1331836 1 NC_015312.1 KEGG: sen:SACE_5087 hypothetical protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1331836 10363085 Psed_1260 Pseudonocardia dioxanivorans CB1190 DEAD/DEAH box helicase domain-containing protein YP_004331358.1 1328324 D 675635 CDS YP_004331359.1 331695120 10363086 1332180..1333574 1 NC_015312.1 KEGG: eba:ebA2494 hypothetical protein; hypothetical protein 1333574 10363086 Psed_1261 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331359.1 1332180 D 675635 CDS YP_004331360.1 331695121 10363087 complement(1333744..1334952) 1 NC_015312.1 KEGG: rop:ROP_pKNR-00470 hypothetical protein; hypothetical protein 1334952 10363087 Psed_1262 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331360.1 1333744 R 675635 CDS YP_004331361.1 331695122 10363088 complement(1335474..1336277) 1 NC_015312.1 KEGG: fri:FraEuI1c_0856 hypothetical protein; hypothetical protein 1336277 10363088 Psed_1263 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331361.1 1335474 R 675635 CDS YP_004331362.1 331695123 10363089 complement(1336274..1336630) 1 NC_015312.1 KEGG: amd:AMED_8298 hypothetical protein; hypothetical protein 1336630 10363089 Psed_1264 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331362.1 1336274 R 675635 CDS YP_004331363.1 331695124 10363091 complement(1337519..1337782) 1 NC_015312.1 KEGG: sco:SCO3449 hypothetical protein; hypothetical protein 1337782 10363091 Psed_1266 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331363.1 1337519 R 675635 CDS YP_004331364.1 331695125 10363092 complement(1337779..1338327) 1 NC_015312.1 KEGG: sco:SCO3450 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1338327 10363092 Psed_1267 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331364.1 1337779 R 675635 CDS YP_004331365.1 331695126 10363093 1338573..1340201 1 NC_015312.1 PFAM: Radical SAM; KEGG: stp:Strop_2597 radical SAM domain-containing protein; Radical SAM domain-containing protein 1340201 10363093 Psed_1268 Pseudonocardia dioxanivorans CB1190 Radical SAM domain-containing protein YP_004331365.1 1338573 D 675635 CDS YP_004331366.1 331695127 10363094 1340198..1341010 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: mbt:JTY_3791 transferase; type 11 methyltransferase 1341010 10363094 Psed_1269 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331366.1 1340198 D 675635 CDS YP_004331367.1 331695128 10363095 1341083..1341556 1 NC_015312.1 hypothetical protein 1341556 10363095 Psed_1270 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331367.1 1341083 D 675635 CDS YP_004331368.1 331695129 10363096 complement(1341581..1341874) 1 NC_015312.1 PFAM: Protein of unknown function DUF427; KEGG: nfa:nfa19250 hypothetical protein; hypothetical protein 1341874 10363096 Psed_1271 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331368.1 1341581 R 675635 CDS YP_004331369.1 331695130 10363097 complement(1341940..1342485) 1 NC_015312.1 KEGG: sco:SCO3441 secreted protein; hypothetical protein 1342485 10363097 Psed_1272 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331369.1 1341940 R 675635 CDS YP_004331370.1 331695131 10363098 complement(1342520..1344118) 1 NC_015312.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: mmi:MMAR_1618 multicopper oxidase, type 1, CueO; multicopper oxidase type 3 1344118 10363098 Psed_1273 Pseudonocardia dioxanivorans CB1190 multicopper oxidase type 3 YP_004331370.1 1342520 R 675635 CDS YP_004331371.1 331695132 10363099 complement(1344245..1344904) 1 NC_015312.1 PFAM: Glutaredoxin; KEGG: nca:Noca_2077 glutaredoxin; glutaredoxin 1344904 10363099 Psed_1274 Pseudonocardia dioxanivorans CB1190 glutaredoxin YP_004331371.1 1344245 R 675635 CDS YP_004331372.1 331695133 10363100 complement(1344901..1345248) 1 NC_015312.1 PFAM: Protein of unknown function DUF427; KEGG: mmi:MMAR_0866 hypothetical protein; hypothetical protein 1345248 10363100 Psed_1275 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331372.1 1344901 R 675635 CDS YP_004331373.1 331695134 10363101 1345387..1346124 1 NC_015312.1 KEGG: mbt:JTY_1688 transcriptional regulatory protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 1346124 10363101 Psed_1276 Pseudonocardia dioxanivorans CB1190 Crp/Fnr family transcriptional regulator YP_004331373.1 1345387 D 675635 CDS YP_004331374.1 331695135 10363102 1346139..1347494 1 NC_015312.1 KEGG: sco:SCO3443 pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, dimerisation; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; dihydrolipoyl dehydrogenase 1347494 10363102 Psed_1277 Pseudonocardia dioxanivorans CB1190 dihydrolipoyl dehydrogenase YP_004331374.1 1346139 D 675635 CDS YP_004331375.1 331695136 10363103 1347587..1348648 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: sco:SCO3459 hypothetical protein; type 11 methyltransferase 1348648 10363103 Psed_1278 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331375.1 1347587 D 675635 CDS YP_004331376.1 331695137 10363104 1348661..1349212 1 NC_015312.1 KEGG: amd:AMED_6852 hypothetical protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein 1349212 10363104 Psed_1279 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331376.1 1348661 D 675635 CDS YP_004331377.1 331695138 10363105 1349341..1349883 1 NC_015312.1 PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1349883 10363105 Psed_1280 Pseudonocardia dioxanivorans CB1190 CDP-alcohol phosphatidyltransferase YP_004331377.1 1349341 D 675635 CDS YP_004331378.1 331695139 10363106 complement(1349865..1350875) 1 NC_015312.1 PFAM: Phosphate transporter; KEGG: nde:NIDE3702 inorganic phosphate transporter; phosphate transporter 1350875 10363106 Psed_1281 Pseudonocardia dioxanivorans CB1190 phosphate transporter YP_004331378.1 1349865 R 675635 CDS YP_004331379.1 331695140 10363108 1351420..1351917 1 NC_015312.1 hypothetical protein 1351917 10363108 Psed_1283 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331379.1 1351420 D 675635 CDS YP_004331380.1 331695141 10363109 1352010..1352540 1 NC_015312.1 KEGG: opr:Ocepr_0380 hypothetical protein; hypothetical protein 1352540 10363109 Psed_1284 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331380.1 1352010 D 675635 CDS YP_004331381.1 331695142 10363110 1352542..1353267 1 NC_015312.1 KEGG: mmi:MMAR_1621 transcriptional regulatory protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 1353267 10363110 Psed_1285 Pseudonocardia dioxanivorans CB1190 Crp/Fnr family transcriptional regulator YP_004331381.1 1352542 D 675635 CDS YP_004331382.1 331695143 10363111 1353408..1354373 1 NC_015312.1 PFAM: Domain of unknown function DUF302; KEGG: sco:SCO3438 hypothetical protein; hypothetical protein 1354373 10363111 Psed_1286 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331382.1 1353408 D 675635 CDS YP_004331383.1 331695144 10363112 1354395..1355156 1 NC_015312.1 KEGG: sco:SCO3437 integral membrane protein; hypothetical protein 1355156 10363112 Psed_1287 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331383.1 1354395 D 675635 CDS YP_004331384.1 331695145 10363113 complement(1355216..1357666) 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: nha:Nham_4423 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 1357666 10363113 Psed_1288 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004331384.1 1355216 R 675635 CDS YP_004331385.1 331695146 10363114 1357927..1359132 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: pth:PTH_2396 transposase and inactivated derivatives; transposase IS116/IS110/IS902 family protein 1359132 10363114 Psed_1289 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004331385.1 1357927 D 675635 CDS YP_004331386.1 331695147 10363115 complement(1359150..1359374) 1 NC_015312.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mmg:MTBMA_c01180 cation transport ATPase; heavy metal transport/detoxification protein 1359374 10363115 Psed_1290 Pseudonocardia dioxanivorans CB1190 heavy metal transport/detoxification protein YP_004331386.1 1359150 R 675635 CDS YP_004331387.1 331695148 10363116 1359485..1359895 1 NC_015312.1 KEGG: mlu:Mlut_06140 predicted transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 1359895 10363116 Psed_1291 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004331387.1 1359485 D 675635 CDS YP_004331388.1 331695149 10363117 1360004..1360552 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nca:Noca_1643 hypothetical protein; alkyl hydroperoxide reductase 1360552 10363117 Psed_1292 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004331388.1 1360004 D 675635 CDS YP_004331389.1 331695150 10363118 complement(1360520..1361872) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ace:Acel_1610 major facilitator transporter; major facilitator superfamily protein 1361872 10363118 Psed_1293 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331389.1 1360520 R 675635 CDS YP_004331390.1 331695151 10363119 complement(1361841..1363286) 1 NC_015312.1 KEGG: saq:Sare_4668 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mercury(II) reductase 1363286 10363119 Psed_1294 Pseudonocardia dioxanivorans CB1190 mercury(II) reductase YP_004331390.1 1361841 R 675635 CDS YP_004331391.1 331695152 10363120 1363442..1364059 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_5058 transcriptional regulator, TetR family; TetR family transcriptional regulator 1364059 10363120 Psed_1295 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331391.1 1363442 D 675635 CDS YP_004331392.1 331695153 10363121 1364098..1364646 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: sit:TM1040_0320 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1364646 10363121 Psed_1296 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004331392.1 1364098 D 675635 CDS YP_004331393.1 331695154 10363122 1364646..1365323 1 NC_015312.1 KEGG: sen:SACE_2965 haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase; haloacid dehalogenase 1365323 10363122 Psed_1297 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004331393.1 1364646 D 675635 CDS YP_004331394.1 331695155 10363123 complement(1365320..1365664) 1 NC_015312.1 KEGG: amd:AMED_8842 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-like protein, actinobacteria; PFAM: Glutaredoxin; glutaredoxin-like protein 1365664 10363123 Psed_1298 Pseudonocardia dioxanivorans CB1190 glutaredoxin-like protein YP_004331394.1 1365320 R 675635 CDS YP_004331395.1 331695156 10363124 1365865..1366101 1 NC_015312.1 hypothetical protein 1366101 10363124 Psed_1299 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331395.1 1365865 D 675635 CDS YP_004331396.1 331695157 10363125 complement(1366103..1366969) 1 NC_015312.1 PFAM: Cytochrome c assembly protein, transmembrane domain; KEGG: mab:MAB_4275c hypothetical protein; cytochrome c biogenesis protein transmembrane region 1366969 10363125 Psed_1300 Pseudonocardia dioxanivorans CB1190 cytochrome c biogenesis protein transmembrane region YP_004331396.1 1366103 R 675635 CDS YP_004331397.1 331695158 10363126 complement(1366975..1367505) 1 NC_015312.1 PFAM: Redoxin; KEGG: mbt:JTY_1690 lipoprotein; redoxin domain-containing protein 1367505 10363126 Psed_1301 Pseudonocardia dioxanivorans CB1190 redoxin domain-containing protein YP_004331397.1 1366975 R 675635 CDS YP_004331398.1 331695159 10363127 1367739..1368089 1 NC_015312.1 PFAM: Protein of unknown function DUF156; KEGG: mbt:JTY_0992 hypothetical protein; hypothetical protein 1368089 10363127 Psed_1302 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331398.1 1367739 D 675635 CDS YP_004331399.1 331695160 10363128 1368086..1368298 1 NC_015312.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bae:BATR1942_14715 copper insertion chaperone and transporter component; heavy metal transport/detoxification protein 1368298 10363128 Psed_1303 Pseudonocardia dioxanivorans CB1190 heavy metal transport/detoxification protein YP_004331399.1 1368086 D 675635 CDS YP_004331400.1 331695161 10363129 1368324..1370537 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mmi:MMAR_1431 cation transport ATPase, ZntA; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 1370537 10363129 Psed_1304 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004331400.1 1368324 D 675635 CDS YP_004331401.1 331695162 10363130 complement(1370538..1370915) 1 NC_015312.1 KEGG: mbt:JTY_1684 hypothetical membrane protein; hypothetical protein 1370915 10363130 Psed_1305 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331401.1 1370538 R 675635 CDS YP_004331402.1 331695163 10363131 complement(1371002..1371460) 1 NC_015312.1 KEGG: ami:Amir_4079 conserved hypothetical membrane spanning protein; hypothetical protein 1371460 10363131 Psed_1306 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331402.1 1371002 R 675635 CDS YP_004331403.1 331695164 10363132 complement(1371530..1372210) 1 NC_015312.1 KEGG: saq:Sare_4665 transmembrane anti-sigma factor; hypothetical protein 1372210 10363132 Psed_1307 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331403.1 1371530 R 675635 CDS YP_004331404.1 331695165 10363133 complement(1372197..1372742) 1 NC_015312.1 KEGG: saq:Sare_4666 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 1372742 10363133 Psed_1308 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331404.1 1372197 R 675635 CDS YP_004331405.1 331695166 10363134 complement(1372860..1373336) 1 NC_015312.1 KEGG: cai:Caci_3639 conserved hypothetical membrane spanning protein; hypothetical protein 1373336 10363134 Psed_1309 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331405.1 1372860 R 675635 CDS YP_004331406.1 331695167 10363135 complement(1373481..1373960) 1 NC_015312.1 KEGG: nca:Noca_4944 hypothetical protein; hypothetical protein 1373960 10363135 Psed_1310 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331406.1 1373481 R 675635 CDS YP_004331407.1 331695168 10363136 complement(1374008..1374427) 1 NC_015312.1 KEGG: nca:Noca_4945 regulatory protein, MerR; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 1374427 10363136 Psed_1311 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004331407.1 1374008 R 675635 CDS YP_004331408.1 331695169 10363137 complement(1374484..1375269) 1 NC_015312.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: kfl:Kfla_5042 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 1375269 10363137 Psed_1312 Pseudonocardia dioxanivorans CB1190 phytanoyl-CoA dioxygenase YP_004331408.1 1374484 R 675635 CDS YP_004331409.1 331695170 10363138 complement(1375282..1375971) 1 NC_015312.1 PFAM: Alkylmercury lyase; KEGG: sna:Snas_5375 alkylmercury lyase; alkylmercury lyase 1375971 10363138 Psed_1313 Pseudonocardia dioxanivorans CB1190 alkylmercury lyase YP_004331409.1 1375282 R 675635 CDS YP_004331410.1 331695171 10363139 complement(1375976..1376629) 1 NC_015312.1 KEGG: sep:SE0086 alkylmercury lyase; PFAM: Alkylmercury lyase; Alkylmercury lyase 1376629 10363139 Psed_1314 Pseudonocardia dioxanivorans CB1190 Alkylmercury lyase YP_004331410.1 1375976 R 675635 CDS YP_004331411.1 331695172 10363140 complement(1376764..1377042) 1 NC_015312.1 KEGG: ach:Achl_4530 hypothetical protein; hypothetical protein 1377042 10363140 Psed_1315 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331411.1 1376764 R 675635 CDS YP_004331412.1 331695173 10363141 complement(1377060..1377422) 1 NC_015312.1 KEGG: mmi:MMAR_p13 transcriptional repressor protein, MerR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 1377422 10363141 Psed_1316 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004331412.1 1377060 R 675635 CDS YP_004331413.1 331695174 10363142 1377549..1378970 1 NC_015312.1 TIGRFAM: Mercury reductase, MerA; KEGG: mil:ML5_4212 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mercuric reductase 1378970 10363142 Psed_1317 Pseudonocardia dioxanivorans CB1190 mercuric reductase YP_004331413.1 1377549 D 675635 CDS YP_004331414.1 331695175 10363143 1378990..1379433 1 NC_015312.1 KEGG: nca:Noca_4945 regulatory protein, MerR; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 1379433 10363143 Psed_1318 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004331414.1 1378990 D 675635 CDS YP_004331415.1 331695176 10363144 complement(1379473..1379793) 1 NC_015312.1 KEGG: hau:Haur_0682 NUDIX hydrolase; NUDIX hydrolase 1379793 10363144 Psed_1319 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004331415.1 1379473 R 675635 CDS YP_004331416.1 331695177 10363145 complement(1380014..1380313) 1 NC_015312.1 KEGG: nca:Noca_4943 hypothetical protein; hypothetical protein 1380313 10363145 Psed_1320 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331416.1 1380014 R 675635 CDS YP_004331417.1 331695178 10363146 complement(1380428..1381243) 1 NC_015312.1 KEGG: fra:Francci3_1851 hypothetical protein; hypothetical protein 1381243 10363146 Psed_1321 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331417.1 1380428 R 675635 CDS YP_004331418.1 331695179 10363147 complement(1381240..1381698) 1 NC_015312.1 manually curated; KEGG: amd:AMED_8298 hypothetical protein; hypothetical protein 1381698 10363147 Psed_1322 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331418.1 1381240 R 675635 CDS YP_004331419.1 331695180 10363148 1383048..1383422 1 NC_015312.1 KEGG: mil:ML5_1144 hypothetical protein; hypothetical protein 1383422 10363148 Psed_1323 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331419.1 1383048 D 675635 CDS YP_004331420.1 331695181 10363149 1383419..1383727 1 NC_015312.1 KEGG: stp:Strop_1661 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1383727 10363149 Psed_1324 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004331420.1 1383419 D 675635 CDS YP_004331421.1 331695182 10363150 complement(1384109..1384462) 1 NC_015312.1 hypothetical protein 1384462 10363150 Psed_1325 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331421.1 1384109 R 675635 CDS YP_004331422.1 331695183 10363151 complement(1384459..1385241) 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: gob:Gobs_3234 nitroreductase; nitroreductase 1385241 10363151 Psed_1326 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004331422.1 1384459 R 675635 CDS YP_004331423.1 331695184 10363152 complement(1385282..1386508) 1 NC_015312.1 KEGG: bbr:BB1086 thiolase; PFAM: Thiolase, C-terminal; Beta-ketoacyl synthase, N-terminal; propanoyl-CoA C-acyltransferase 1386508 10363152 Psed_1327 Pseudonocardia dioxanivorans CB1190 propanoyl-CoA C-acyltransferase YP_004331423.1 1385282 R 675635 CDS YP_004331424.1 331695185 10363153 complement(1386531..1388096) 1 NC_015312.1 KEGG: chl:Chy400_4095 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 1388096 10363153 Psed_1328 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004331424.1 1386531 R 675635 CDS YP_004331425.1 331695186 10363154 1388263..1389975 1 NC_015312.1 KEGG: mva:Mvan_4407 GAF sensor protein; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR 1389975 10363154 Psed_1329 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004331425.1 1388263 D 675635 CDS YP_004331426.1 331695187 10363155 1390232..1391647 1 NC_015312.1 KEGG: sin:YN1551_2025 hypothetical protein; hypothetical protein 1391647 10363155 Psed_1330 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331426.1 1390232 D 675635 CDS YP_004331427.1 331695188 10363156 1391755..1392726 1 NC_015312.1 TIGRFAM: LPPG:Fo 2-phospho-L-lactate transferase; HAMAP: LPPG:FO 2-phospho-L-lactate transferase; KEGG: rrs:RoseRS_1138 LPPG:FO 2-phospho-L-lactate transferase; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; LPPG:FO 2-phospho-L-lactate transferase 1392726 10363156 Psed_1331 Pseudonocardia dioxanivorans CB1190 LPPG:FO 2-phospho-L-lactate transferase YP_004331427.1 1391755 D 675635 CDS YP_004331428.1 331695189 10363157 complement(1392763..1393779) 1 NC_015312.1 KEGG: sen:SACE_3707 branched-chain amino acid binding protein; branched-chain amino acid binding protein 1393779 10363157 Psed_1332 Pseudonocardia dioxanivorans CB1190 branched-chain amino acid binding protein YP_004331428.1 1392763 R 675635 CDS YP_004331429.1 331695190 10363158 1393925..1395028 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: swi:Swit_4272 luciferase protein; luciferase-like protein 1395028 10363158 Psed_1333 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331429.1 1393925 D 675635 CDS YP_004331430.1 331695191 10363159 1395025..1395861 1 NC_015312.1 KEGG: bra:BRADO6046 bifunctional enzyme with isomerase/decarboxylase activity; PFAM: Fumarylacetoacetase, C-terminal-like; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1395861 10363159 Psed_1334 Pseudonocardia dioxanivorans CB1190 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_004331430.1 1395025 D 675635 CDS YP_004331431.1 331695192 10363160 1395858..1396772 1 NC_015312.1 PFAM: Ornithine cyclodeaminase/mu-crystallin; KEGG: swi:Swit_3083 ornithine cyclodeaminase; ornithine cyclodeaminase/mu-crystallin 1396772 10363160 Psed_1335 Pseudonocardia dioxanivorans CB1190 ornithine cyclodeaminase/mu-crystallin YP_004331431.1 1395858 D 675635 CDS YP_004331432.1 331695193 10363161 1396769..1397680 1 NC_015312.1 TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: sro:Sros_7523 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; dihydrodipicolinate synthase 1397680 10363161 Psed_1336 Pseudonocardia dioxanivorans CB1190 dihydrodipicolinate synthase YP_004331432.1 1396769 D 675635 CDS YP_004331433.1 331695194 10363162 1397750..1398874 1 NC_015312.1 KEGG: swi:Swit_3086 gentisate 1 2-dioxygenase-like protein; gentisate 1 2-dioxygenase-like protein 1398874 10363162 Psed_1337 Pseudonocardia dioxanivorans CB1190 gentisate 1 2-dioxygenase-like protein YP_004331433.1 1397750 D 675635 CDS YP_004331434.1 331695195 10363163 complement(1398871..1399782) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pen:PSEEN2584 LysR family transcriptional regulator; LysR family transcriptional regulator 1399782 10363163 Psed_1338 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004331434.1 1398871 R 675635 CDS YP_004331435.1 331695196 10363164 complement(1399825..1400760) 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fal:FRAAL0422 oxidoreductase; NAD-dependent epimerase/dehydratase 1400760 10363164 Psed_1339 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004331435.1 1399825 R 675635 CDS YP_004331436.1 331695197 10363165 1400837..1401409 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL0421 regulatory protein; TetR family transcriptional regulator 1401409 10363165 Psed_1340 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331436.1 1400837 D 675635 CDS YP_004331437.1 331695198 10363166 1401466..1403262 1 NC_015312.1 manually curated; KEGG: sco:SCO5945 transferase; PFAM: Gamma-glutamyltranspeptidase; Gamma-glutamyltransferase 1403262 10363166 Psed_1341 Pseudonocardia dioxanivorans CB1190 Gamma-glutamyltransferase YP_004331437.1 1401466 D 675635 CDS YP_004331438.1 331695199 10363167 1403345..1404133 1 NC_015312.1 KEGG: cwo:Cwoe_2765 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 1404133 10363167 Psed_1342 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331438.1 1403345 D 675635 CDS YP_004331439.1 331695200 10363168 1404279..1406000 1 NC_015312.1 KEGG: tcu:Tcur_0775 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1406000 10363168 Psed_1343 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004331439.1 1404279 D 675635 CDS YP_004331440.1 331695201 10363169 1405997..1406926 1 NC_015312.1 PFAM: Crotonase, core; KEGG: pla:Plav_1028 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 1406926 10363169 Psed_1344 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004331440.1 1405997 D 675635 CDS YP_004331441.1 331695202 10363170 1406926..1408110 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: mva:Mvan_0394 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 1408110 10363170 Psed_1345 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004331441.1 1406926 D 675635 CDS YP_004331442.1 331695203 10363171 1408116..1409225 1 NC_015312.1 KEGG: amd:AMED_3864 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; isovaleryl-CoA dehydrogenase 1409225 10363171 Psed_1346 Pseudonocardia dioxanivorans CB1190 isovaleryl-CoA dehydrogenase YP_004331442.1 1408116 D 675635 CDS YP_004331443.1 331695204 10363172 1409293..1410204 1 NC_015312.1 PFAM: cyclase; KEGG: fre:Franean1_2682 cyclase protein; cyclase 1410204 10363172 Psed_1347 Pseudonocardia dioxanivorans CB1190 cyclase YP_004331443.1 1409293 D 675635 CDS YP_004331444.1 331695205 10363173 complement(1410209..1410979) 1 NC_015312.1 KEGG: cwo:Cwoe_2765 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 1410979 10363173 Psed_1348 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331444.1 1410209 R 675635 CDS YP_004331445.1 331695206 10363174 1411105..1413537 1 NC_015312.1 KEGG: mmi:MMAR_4757 acyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 1413537 10363174 Psed_1349 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004331445.1 1411105 D 675635 CDS YP_004331446.1 331695207 10363175 1413530..1414585 1 NC_015312.1 KEGG: fre:Franean1_4505 luciferase protein; TIGRFAM: Luciferase oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase oxidoreductase, group 1 1414585 10363175 Psed_1350 Pseudonocardia dioxanivorans CB1190 luciferase oxidoreductase, group 1 YP_004331446.1 1413530 D 675635 CDS YP_004331447.1 331695208 10363176 complement(1414621..1415145) 1 NC_015312.1 hypothetical protein 1415145 10363176 Psed_1351 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331447.1 1414621 R 675635 CDS YP_004331448.1 331695209 10363177 complement(1415142..1416992) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: fri:FraEuI1c_3097 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 1416992 10363177 Psed_1352 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004331448.1 1415142 R 675635 CDS YP_004331449.1 331695210 10363178 complement(1416989..1417873) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3096 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 1417873 10363178 Psed_1353 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331449.1 1416989 R 675635 CDS YP_004331450.1 331695211 10363179 complement(1417870..1418811) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL0338 ABC transporter oligopeptide permease; ABC transporter permease 1418811 10363179 Psed_1354 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331450.1 1417870 R 675635 CDS YP_004331451.1 331695212 10363180 complement(1418823..1420463) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fal:FRAAL0339 ABC transporter oligopeptide binding protein; ABC transporter substrate-binding protein 1420463 10363180 Psed_1355 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331451.1 1418823 R 675635 CDS YP_004331452.1 331695213 10363181 1420832..1421731 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: amd:AMED_6949 alpha/beta hydrolase; alpha/beta hydrolase 1421731 10363181 Psed_1356 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331452.1 1420832 D 675635 CDS YP_004331453.1 331695214 10363182 1421878..1422636 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fre:Franean1_4114 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 1422636 10363182 Psed_1357 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331453.1 1421878 D 675635 CDS YP_004331454.1 331695215 10363183 complement(1422689..1423420) 1 NC_015312.1 KEGG: cwo:Cwoe_4297 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 1423420 10363183 Psed_1358 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331454.1 1422689 R 675635 CDS YP_004331455.1 331695216 10363184 complement(1423563..1424765) 1 NC_015312.1 KEGG: mau:Micau_3966 MoeA domain-containing protein domain I and II; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; SMART: Molybdopterin binding; MoeA domain-containing protein domain I and II 1424765 10363184 Psed_1359 Pseudonocardia dioxanivorans CB1190 MoeA domain-containing protein domain I and II YP_004331455.1 1423563 R 675635 CDS YP_004331456.1 331695217 10363185 complement(1424803..1425417) 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: fri:FraEuI1c_5167 nitroreductase; nitroreductase 1425417 10363185 Psed_1360 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004331456.1 1424803 R 675635 CDS YP_004331457.1 331695218 10363186 complement(1425472..1426389) 1 NC_015312.1 KEGG: mav:MAV_3101 oxidoreductase, short chain dehydrogenase/reductase protein; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1426389 10363186 Psed_1361 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331457.1 1425472 R 675635 CDS YP_004331458.1 331695219 10363187 complement(1426583..1426999) 1 NC_015312.1 hypothetical protein 1426999 10363187 Psed_1362 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331458.1 1426583 R 675635 CDS YP_004331459.1 331695220 10363188 complement(1427073..1428269) 1 NC_015312.1 KEGG: nml:Namu_0044 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 1428269 10363188 Psed_1363 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004331459.1 1427073 R 675635 CDS YP_004331460.1 331695221 10363189 complement(1428278..1430080) 1 NC_015312.1 KEGG: pla:Plav_1165 cyclohexanone monooxygenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; phenylacetone monooxygenase 1430080 10363189 Psed_1364 Pseudonocardia dioxanivorans CB1190 phenylacetone monooxygenase YP_004331460.1 1428278 R 675635 CDS YP_004331461.1 331695222 10363190 1430596..1431873 1 NC_015312.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; HAMAP: GTP cyclohydrolase II, RibA; 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; Riboflavin biosynthesis protein RibBA; KEGG: amd:AMED_2773 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; GTP cyclohydrolase-2 1431873 10363190 Psed_1365 Pseudonocardia dioxanivorans CB1190 GTP cyclohydrolase-2 YP_004331461.1 1430596 D 675635 CDS YP_004331462.1 331695223 10363191 1431990..1433483 1 NC_015312.1 KEGG: mmi:MMAR_0240 monoooxygenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4-hydroxyacetophenone monooxygenase 1433483 10363191 Psed_1366 Pseudonocardia dioxanivorans CB1190 4-hydroxyacetophenone monooxygenase YP_004331462.1 1431990 D 675635 CDS YP_004331463.1 331695224 10363192 1433577..1434722 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: mmi:MMAR_0308 monooxygenase; luciferase-like protein 1434722 10363192 Psed_1367 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331463.1 1433577 D 675635 CDS YP_004331464.1 331695225 10363193 1435013..1435864 1 NC_015312.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: fri:FraEuI1c_5596 SMP-30/gluconolaconase/LRE-like region-containing protein; SMP-30/Gluconolaconase/LRE-like region-containing protein 1435864 10363193 Psed_1368 Pseudonocardia dioxanivorans CB1190 SMP-30/Gluconolaconase/LRE-like region-containing protein YP_004331464.1 1435013 D 675635 CDS YP_004331465.1 331695226 10363194 1435875..1437176 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_0210 luciferase protein; luciferase-like protein 1437176 10363194 Psed_1369 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331465.1 1435875 D 675635 CDS YP_004331466.1 331695227 10363195 1437223..1438254 1 NC_015312.1 manually curated; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; KEGG: mrb:Mrub_0282 LacI family transcriptional regulator; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 1438254 10363195 Psed_1370 Pseudonocardia dioxanivorans CB1190 LacI family transcriptional regulator YP_004331466.1 1437223 D 675635 CDS YP_004331467.1 331695228 10363196 complement(1438285..1439232) 1 NC_015312.1 TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: mab:MAB_0995 hypothetical protein; F420-dependent oxidoreductase 1439232 10363196 Psed_1371 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004331467.1 1438285 R 675635 CDS YP_004331468.1 331695229 10363197 complement(1439518..1440111) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rer:RER_50580 TetR family transcriptional regulator; TetR family transcriptional regulator 1440111 10363197 Psed_1372 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331468.1 1439518 R 675635 CDS YP_004331469.1 331695230 10363198 1440496..1441605 1 NC_015312.1 hypothetical protein 1441605 10363198 Psed_1373 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331469.1 1440496 D 675635 CDS YP_004331470.1 331695231 10363199 1441617..1443797 1 NC_015312.1 PFAM: Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; KEGG: rop:ROP_17970 oxidoreductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; nitrate reductase 1443797 10363199 Psed_1374 Pseudonocardia dioxanivorans CB1190 nitrate reductase YP_004331470.1 1441617 D 675635 CDS YP_004331471.1 331695232 10363200 1443808..1444995 1 NC_015312.1 KEGG: fre:Franean1_6244 epocide hydrolase domain-containing protein; PFAM: Epoxide hydrolase, N-terminal; Alpha/beta hydrolase fold-1; microsomal epoxide hydrolase 1444995 10363200 Psed_1375 Pseudonocardia dioxanivorans CB1190 microsomal epoxide hydrolase YP_004331471.1 1443808 D 675635 CDS YP_004331472.1 331695233 10363201 1445488..1446765 1 NC_015312.1 KEGG: fra:Francci3_0380 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; hypothetical protein 1446765 10363201 Psed_1376 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331472.1 1445488 D 675635 CDS YP_004331473.1 331695234 10363202 1446894..1449716 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter permease; KEGG: amd:AMED_7155 fused ATPase and permease components of ABC-type branched-chain amino acid transport system; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 1449716 10363202 Psed_1377 Pseudonocardia dioxanivorans CB1190 polyamine-transporting ATPase YP_004331473.1 1446894 D 675635 CDS YP_004331474.1 331695235 10363203 1449716..1450498 1 NC_015312.1 KEGG: fal:FRAAL5036 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1450498 10363203 Psed_1378 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004331474.1 1449716 D 675635 CDS YP_004331475.1 331695236 10363204 1450577..1451491 1 NC_015312.1 KEGG: mmi:MMAR_1575 oxidoreductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 1451491 10363204 Psed_1379 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004331475.1 1450577 D 675635 CDS YP_004331476.1 331695237 10363205 1451541..1452830 1 NC_015312.1 PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: sth:STH2357 acyl-CoA dehydrogenase, short-chain specific; acyl-CoA dehydrogenase 1452830 10363205 Psed_1380 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004331476.1 1451541 D 675635 CDS YP_004331477.1 331695238 10363207 1453876..1454292 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: mav:MAV_5258 hypothetical protein; hypothetical protein 1454292 10363207 Psed_1382 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331477.1 1453876 D 675635 CDS YP_004331478.1 331695239 10363208 1454289..1455419 1 NC_015312.1 KEGG: mpa:MAP4297c hypothetical protein; hypothetical protein 1455419 10363208 Psed_1383 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331478.1 1454289 D 675635 CDS YP_004331479.1 331695240 10363209 complement(1455547..1457142) 1 NC_015312.1 KEGG: msm:MSMEG_0526 oxidoreductase, GMC family protein; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; choline dehydrogenase 1457142 10363209 Psed_1384 Pseudonocardia dioxanivorans CB1190 choline dehydrogenase YP_004331479.1 1455547 R 675635 CDS YP_004331480.1 331695241 10363210 1457601..1459061 1 NC_015312.1 PFAM: Aldehyde dehydrogenase domain; KEGG: tcu:Tcur_2494 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 1459061 10363210 Psed_1385 Pseudonocardia dioxanivorans CB1190 aldehyde dehydrogenase YP_004331480.1 1457601 D 675635 CDS YP_004331481.1 331695242 10363213 1460828..1461226 1 NC_015312.1 KEGG: aau:AAur_pTC20119 hypothetical protein; hypothetical protein 1461226 10363213 Psed_1388 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331481.1 1460828 D 675635 CDS YP_004331482.1 331695243 10363214 1461223..1461885 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1461885 10363214 Psed_1389 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331482.1 1461223 D 675635 CDS YP_004331483.1 331695244 10363215 complement(1461909..1463507) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sgr:SGR_550 major facilitator superfamily permease; major facilitator superfamily protein 1463507 10363215 Psed_1390 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331483.1 1461909 R 675635 CDS YP_004331484.1 331695245 10363216 complement(1463699..1465192) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: scb:SCAB_1721 transmembrane transport protein; major facilitator superfamily protein 1465192 10363216 Psed_1391 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331484.1 1463699 R 675635 CDS YP_004331485.1 331695246 10363217 complement(1465189..1465605) 1 NC_015312.1 KEGG: axy:AXYL_04232 cupin domain-containing protein 5; cupin 1465605 10363217 Psed_1392 Pseudonocardia dioxanivorans CB1190 cupin YP_004331485.1 1465189 R 675635 CDS YP_004331486.1 331695247 10363218 1465689..1466366 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: scb:SCAB_1731 TetR family regulator; TetR family transcriptional regulator 1466366 10363218 Psed_1393 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331486.1 1465689 D 675635 CDS YP_004331487.1 331695248 10363219 complement(1466374..1467477) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 1467477 10363219 Psed_1394 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004331487.1 1466374 R 675635 CDS YP_004331488.1 331695249 10363220 complement(1467552..1469306) 1 NC_015312.1 TIGRFAM: CocE/NonD hydrolase; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S9/S15; KEGG: rxy:Rxyl_2383 peptidase S15; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein 1469306 10363220 Psed_1395 Pseudonocardia dioxanivorans CB1190 hydrolase CocE/NonD family protein YP_004331488.1 1467552 R 675635 CDS YP_004331489.1 331695250 10363221 1469459..1470214 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mxa:MXAN_0158 alpha/beta fold family hydrolase; alpha/beta hydrolase 1470214 10363221 Psed_1396 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331489.1 1469459 D 675635 CDS YP_004331490.1 331695251 10363222 1470467..1472059 1 NC_015312.1 PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; Alpha/beta hydrolase fold-1; KEGG: sen:SACE_1611 exported protease; TAP domain-containing protein 1472059 10363222 Psed_1397 Pseudonocardia dioxanivorans CB1190 TAP domain-containing protein YP_004331490.1 1470467 D 675635 CDS YP_004331491.1 331695252 10363223 1472134..1473243 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 1473243 10363223 Psed_1398 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004331491.1 1472134 D 675635 CDS YP_004331492.1 331695253 10363224 1473606..1474247 1 NC_015312.1 KEGG: spu:373354 histone H1-beta; hypothetical protein 1474247 10363224 Psed_1399 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331492.1 1473606 D 675635 CDS YP_004331493.1 331695254 10363225 1474251..1474718 1 NC_015312.1 hypothetical protein 1474718 10363225 Psed_1400 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331493.1 1474251 D 675635 CDS YP_004331494.1 331695255 10363226 complement(1474814..1475557) 1 NC_015312.1 KEGG: gob:Gobs_3806 threonyl/alanyl tRNA synthetase SAD; PFAM: Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA synthetase, class IIc, N-terminal; SMART: Threonyl/alanyl tRNA synthetase, SAD; tjhreonyl/alanyl tRNA synthetase SAD 1475557 10363226 Psed_1401 Pseudonocardia dioxanivorans CB1190 tjhreonyl/alanyl tRNA synthetase SAD YP_004331494.1 1474814 R 675635 CDS YP_004331495.1 331695256 10363227 1475689..1476384 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: stp:Strop_2558 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 1476384 10363227 Psed_1402 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004331495.1 1475689 D 675635 CDS YP_004331496.1 331695257 10363228 complement(1476263..1477021) 1 NC_015312.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tcu:Tcur_2744 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1477021 10363228 Psed_1403 Pseudonocardia dioxanivorans CB1190 CDP-alcohol phosphatidyltransferase YP_004331496.1 1476263 R 675635 CDS YP_004331497.1 331695258 10363229 1477255..1478241 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: tcu:Tcur_2745 dehydrogenase; FAD dependent oxidoreductase 1478241 10363229 Psed_1404 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004331497.1 1477255 D 675635 CDS YP_004331498.1 331695259 10363230 1478244..1478642 1 NC_015312.1 KEGG: mil:ML5_4784 6-pyruvoyl tetrahydropterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 1478642 10363230 Psed_1405 Pseudonocardia dioxanivorans CB1190 6-pyruvoyl tetrahydrobiopterin synthase YP_004331498.1 1478244 D 675635 CDS YP_004331499.1 331695260 10363231 1478632..1479714 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: sma:SAV_1795 glycosyl transferase; group 1 glycosyl transferase 1479714 10363231 Psed_1406 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004331499.1 1478632 D 675635 CDS YP_004331500.1 331695261 10363232 1479711..1480685 1 NC_015312.1 KEGG: tcu:Tcur_2749 hypothetical protein; hypothetical protein 1480685 10363232 Psed_1407 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331500.1 1479711 D 675635 CDS YP_004331501.1 331695262 10363233 1480682..1482301 1 NC_015312.1 PFAM: Sulfatase; KEGG: mil:ML5_1364 sulfatase; sulfatase 1482301 10363233 Psed_1408 Pseudonocardia dioxanivorans CB1190 sulfatase YP_004331501.1 1480682 D 675635 CDS YP_004331502.1 331695263 10363234 complement(1482289..1482789) 1 NC_015312.1 KEGG: rer:RER_50600 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 1482789 10363234 Psed_1409 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004331502.1 1482289 R 675635 CDS YP_004331503.1 331695264 10363235 1482918..1484081 1 NC_015312.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: req:REQ_44720 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 1484081 10363235 Psed_1410 Pseudonocardia dioxanivorans CB1190 4-hydroxyphenylpyruvate dioxygenase YP_004331503.1 1482918 D 675635 CDS YP_004331504.1 331695265 10363237 complement(1484510..1486147) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_4222 extracellular solute-binding protein; ABC transporter substrate-binding protein 1486147 10363237 Psed_1412 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331504.1 1484510 R 675635 CDS YP_004331505.1 331695266 10363238 complement(1486234..1486767) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mau:Micau_1726 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1486767 10363238 Psed_1413 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331505.1 1486234 R 675635 CDS YP_004331506.1 331695267 10363239 complement(1486772..1488118) 1 NC_015312.1 KEGG: reu:Reut_B5781 Rieske (2Fe-2S) region; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase 1488118 10363239 Psed_1414 Pseudonocardia dioxanivorans CB1190 phthalate 4,5-dioxygenase YP_004331506.1 1486772 R 675635 CDS YP_004331507.1 331695268 10363240 1488338..1489273 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: sco:SCO6309 LysR family transcriptional regulator; LysR family transcriptional regulator 1489273 10363240 Psed_1415 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004331507.1 1488338 D 675635 CDS YP_004331508.1 331695269 10363241 complement(1489325..1490962) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sti:Sthe_0680 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 1490962 10363241 Psed_1416 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331508.1 1489325 R 675635 CDS YP_004331509.1 331695270 10363242 complement(1491331..1492209) 1 NC_015312.1 KEGG: lch:Lcho_3754 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase; phosphoribulokinase 1492209 10363242 Psed_1417 Pseudonocardia dioxanivorans CB1190 phosphoribulokinase YP_004331509.1 1491331 R 675635 CDS YP_004331510.1 331695271 10363243 complement(1492223..1493296) 1 NC_015312.1 HAMAP: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; KEGG: cti:RALTA_B1696 fructose 1,6-bisphosphatase (RuBisCO operon); PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; fructose-1,6-bisphosphatase class 1 1493296 10363243 Psed_1418 Pseudonocardia dioxanivorans CB1190 fructose-1,6-bisphosphatase class 1 YP_004331510.1 1492223 R 675635 CDS YP_004331511.1 331695272 10363244 1493530..1494786 1 NC_015312.1 PFAM: Amidase; KEGG: rha:RHA1_ro02850 indoleacetamide hydrolase; amidase 1494786 10363244 Psed_1419 Pseudonocardia dioxanivorans CB1190 amidase YP_004331511.1 1493530 D 675635 CDS YP_004331512.1 331695273 10363245 complement(1494864..1495511) 1 NC_015312.1 KEGG: fra:Francci3_1236 hypothetical protein; hypothetical protein 1495511 10363245 Psed_1420 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331512.1 1494864 R 675635 CDS YP_004331513.1 331695274 10363246 complement(1495702..1496127) 1 NC_015312.1 PFAM: Ferric-uptake regulator; KEGG: stp:Strop_2053 ferric-uptake regulator; Fur family ferric uptake regulator 1496127 10363246 Psed_1421 Pseudonocardia dioxanivorans CB1190 Fur family ferric uptake regulator YP_004331513.1 1495702 R 675635 CDS YP_004331514.1 331695275 10363247 complement(1496100..1496540) 1 NC_015312.1 PFAM: Ferritin/Dps protein; KEGG: nfa:nfa13000 hypothetical protein; ferritin 1496540 10363247 Psed_1422 Pseudonocardia dioxanivorans CB1190 ferritin YP_004331514.1 1496100 R 675635 CDS YP_004331515.1 331695276 10363248 complement(1496650..1497264) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: kra:Krad_4434 transcriptional regulator; TetR family transcriptional regulator 1497264 10363248 Psed_1423 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331515.1 1496650 R 675635 CDS YP_004331516.1 331695277 10363249 1497338..1498585 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rop:ROP_50640 MFS transporter; major facilitator superfamily protein 1498585 10363249 Psed_1424 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331516.1 1497338 D 675635 CDS YP_004331517.1 331695278 10363250 1498602..1498871 1 NC_015312.1 KEGG: ace:Acel_0486 hypothetical protein; HAMAP: Protein of unknown function DUF167; PFAM: Protein of unknown function DUF167; hypothetical protein 1498871 10363250 Psed_1425 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331517.1 1498602 D 675635 CDS YP_004331518.1 331695279 10363251 complement(1498890..1499684) 1 NC_015312.1 KEGG: fal:FRAAL1747 hypothetical protein; hypothetical protein 1499684 10363251 Psed_1426 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331518.1 1498890 R 675635 CDS YP_004331519.1 331695280 10363252 complement(1499819..1500352) 1 NC_015312.1 hypothetical protein 1500352 10363252 Psed_1427 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331519.1 1499819 R 675635 CDS YP_004331520.1 331695281 10363253 complement(1500349..1501137) 1 NC_015312.1 KEGG: cre:CHLREDRAFT_205991 secreted protease and protease inhibitor; hypothetical protein 1501137 10363253 Psed_1428 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331520.1 1500349 R 675635 CDS YP_004331521.1 331695282 10363254 1501438..1502298 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0145; KEGG: cai:Caci_1282 hypothetical protein; hypothetical protein 1502298 10363254 Psed_1429 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331521.1 1501438 D 675635 CDS YP_004331522.1 331695283 10363255 1502340..1503173 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0145; KEGG: cai:Caci_1283 protein of unknown function DUF74; hypothetical protein 1503173 10363255 Psed_1430 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331522.1 1502340 D 675635 CDS YP_004331523.1 331695284 10363256 1503224..1503622 1 NC_015312.1 KEGG: amd:AMED_1338 hypothetical protein; hypothetical protein 1503622 10363256 Psed_1431 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331523.1 1503224 D 675635 CDS YP_004331524.1 331695285 10363257 complement(1503635..1504600) 1 NC_015312.1 KEGG: abc:ACICU_01880 AraC-type DNA-binding domain-containing protein; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 1504600 10363257 Psed_1432 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004331524.1 1503635 R 675635 CDS YP_004331525.1 331695286 10363258 1504994..1506016 1 NC_015312.1 PFAM: ThiJ/PfpI; KEGG: cai:Caci_1157 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 1506016 10363258 Psed_1433 Pseudonocardia dioxanivorans CB1190 ThiJ/PfpI domain-containing protein YP_004331525.1 1504994 D 675635 CDS YP_004331526.1 331695287 10363259 1506018..1506449 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: reh:H16_B1338 hypothetical protein; hypothetical protein 1506449 10363259 Psed_1434 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331526.1 1506018 D 675635 CDS YP_004331527.1 331695288 10363260 1506462..1506962 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: bur:Bcep18194_B3047 hypothetical protein; hypothetical protein 1506962 10363260 Psed_1435 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331527.1 1506462 D 675635 CDS YP_004331528.1 331695289 10363261 1506979..1508505 1 NC_015312.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: rme:Rmet_1316 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 1508505 10363261 Psed_1436 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004331528.1 1506979 D 675635 CDS YP_004331529.1 331695290 10363262 1508502..1508780 1 NC_015312.1 PFAM: Toluene-4-monooxygenase system B; KEGG: fra:Francci3_0212 toluene-4-monooxygenase system B; Toluene-4-monooxygenase system B 1508780 10363262 Psed_1437 Pseudonocardia dioxanivorans CB1190 Toluene-4-monooxygenase system B YP_004331529.1 1508502 D 675635 CDS YP_004331530.1 331695291 10363263 1508794..1509111 1 NC_015312.1 PFAM: Monooxygenase component MmoB/DmpM; KEGG: bbt:BBta_1595 toluene-4-monooxygenase system protein D; monooxygenase component MmoB/DmpM 1509111 10363263 Psed_1438 Pseudonocardia dioxanivorans CB1190 monooxygenase component MmoB/DmpM YP_004331530.1 1508794 D 675635 CDS YP_004331531.1 331695292 10363264 1509108..1510115 1 NC_015312.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5675 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 1510115 10363264 Psed_1439 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004331531.1 1509108 D 675635 CDS YP_004331532.1 331695293 10363265 1510288..1510644 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bts:Btus_2067 Rieske (2Fe-2S) iron-sulfur domain protein; Rieske (2Fe-2S) domain-containing protein 1510644 10363265 Psed_1440 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004331532.1 1510288 D 675635 CDS YP_004331533.1 331695294 10363266 1510648..1511880 1 NC_015312.1 KEGG: nca:Noca_4282 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 1511880 10363266 Psed_1441 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004331533.1 1510648 D 675635 CDS YP_004331534.1 331695295 10363267 1511877..1512254 1 NC_015312.1 PFAM: Ribosomal protein L22/L17; KEGG: sgr:SGR_2829 50S ribosomal protein L22; 50S ribosomal protein L22 1512254 10363267 Psed_1442 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L22 YP_004331534.1 1511877 D 675635 CDS YP_004331535.1 331695296 10363268 1512285..1512614 1 NC_015312.1 PFAM: Domain of unknown function DUF59; KEGG: tpr:Tpau_2504 protein of unknown function DUF59; hypothetical protein 1512614 10363268 Psed_1443 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331535.1 1512285 D 675635 CDS YP_004331536.1 331695297 10363269 1512626..1512922 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nca:Noca_1187 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1512922 10363269 Psed_1444 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004331536.1 1512626 D 675635 CDS YP_004331537.1 331695298 10363270 complement(1512932..1513156) 1 NC_015312.1 KEGG: kfl:Kfla_5298 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 1513156 10363270 Psed_1445 Pseudonocardia dioxanivorans CB1190 XRE family transcriptional regulator YP_004331537.1 1512932 R 675635 CDS YP_004331538.1 331695299 10363271 complement(1513169..1513648) 1 NC_015312.1 KEGG: amd:AMED_7526 integral membrane protein; hypothetical protein 1513648 10363271 Psed_1446 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331538.1 1513169 R 675635 CDS YP_004331539.1 331695300 10363272 complement(1513703..1514854) 1 NC_015312.1 PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; KEGG: fri:FraEuI1c_3679 phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; phosphoribosylaminoimidazolecarboxamide formyltransferase 1514854 10363272 Psed_1447 Pseudonocardia dioxanivorans CB1190 phosphoribosylaminoimidazolecarboxamide formyltransferase YP_004331539.1 1513703 R 675635 CDS YP_004331540.1 331695301 10363273 complement(1514986..1516641) 1 NC_015312.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: kfl:Kfla_0918 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1516641 10363273 Psed_1448 Pseudonocardia dioxanivorans CB1190 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004331540.1 1514986 R 675635 CDS YP_004331541.1 331695302 10363274 1516847..1518583 1 NC_015312.1 KEGG: rfr:Rfer_2478 thiamine pyrophosphate enzyme-like TPP binding protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase 1518583 10363274 Psed_1449 Pseudonocardia dioxanivorans CB1190 acetolactate synthase YP_004331541.1 1516847 D 675635 CDS YP_004331542.1 331695303 10363275 complement(1518621..1519037) 1 NC_015312.1 KEGG: aau:AAur_pTC20145 nitrile hydratase b-subunit; nitrile hydratase b-subunit 1519037 10363275 Psed_1450 Pseudonocardia dioxanivorans CB1190 nitrile hydratase b-subunit YP_004331542.1 1518621 R 675635 CDS YP_004331543.1 331695304 10363276 complement(1519034..1519663) 1 NC_015312.1 TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 1519663 10363276 Psed_1451 Pseudonocardia dioxanivorans CB1190 nitrile hydratase subunit alpha YP_004331543.1 1519034 R 675635 CDS YP_004331544.1 331695305 10363277 complement(1519660..1520364) 1 NC_015312.1 KEGG: aau:AAur_pTC20147 cobalt-containing nitrile hydratase beta subunit; nitrile hydratase 1520364 10363277 Psed_1452 Pseudonocardia dioxanivorans CB1190 nitrile hydratase YP_004331544.1 1519660 R 675635 CDS YP_004331545.1 331695306 10363278 complement(1520361..1521908) 1 NC_015312.1 PFAM: Amidase; KEGG: gob:Gobs_0303 amidase; amidase 1521908 10363278 Psed_1453 Pseudonocardia dioxanivorans CB1190 amidase YP_004331545.1 1520361 R 675635 CDS YP_004331546.1 331695307 10363279 complement(1522031..1522420) 1 NC_015312.1 KEGG: nfa:nfa48290 hypothetical protein; hypothetical protein 1522420 10363279 Psed_1454 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331546.1 1522031 R 675635 CDS YP_004331547.1 331695308 10363280 complement(1522606..1523865) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mjl:Mjls_1024 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1523865 10363280 Psed_1455 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331547.1 1522606 R 675635 CDS YP_004331548.1 331695309 10363281 complement(1523862..1524404) 1 NC_015312.1 KEGG: amd:AMED_0110 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1524404 10363281 Psed_1456 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331548.1 1523862 R 675635 CDS YP_004331549.1 331695310 10363282 complement(1524462..1525514) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: msv:Mesil_2128 alpha/beta hydrolase fold protein; alpha/beta hydrolase 1525514 10363282 Psed_1457 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331549.1 1524462 R 675635 CDS YP_004331550.1 331695311 10363283 complement(1525696..1526379) 1 NC_015312.1 KEGG: rlt:Rleg2_6079 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1526379 10363283 Psed_1458 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331550.1 1525696 R 675635 CDS YP_004331551.1 331695312 10363284 complement(1526376..1527218) 1 NC_015312.1 KEGG: sti:Sthe_2868 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1527218 10363284 Psed_1459 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331551.1 1526376 R 675635 CDS YP_004331552.1 331695313 10363285 complement(1527247..1527750) 1 NC_015312.1 KEGG: rxy:Rxyl_0111 (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 1527750 10363285 Psed_1460 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004331552.1 1527247 R 675635 CDS YP_004331553.1 331695314 10363286 complement(1527752..1530076) 1 NC_015312.1 KEGG: tcu:Tcur_4235 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 1530076 10363286 Psed_1461 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004331553.1 1527752 R 675635 CDS YP_004331554.1 331695315 10363287 complement(1530238..1530720) 1 NC_015312.1 KEGG: sco:SCO1119 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 1530720 10363287 Psed_1462 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004331554.1 1530238 R 675635 CDS YP_004331555.1 331695316 10363288 1530856..1534293 1 NC_015312.1 KEGG: amd:AMED_5858 indolepyruvate ferredoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; indolepyruvate ferredoxin oxidoreductase 1534293 10363288 Psed_1463 Pseudonocardia dioxanivorans CB1190 indolepyruvate ferredoxin oxidoreductase YP_004331555.1 1530856 D 675635 CDS YP_004331556.1 331695317 10363289 1534378..1535811 1 NC_015312.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: mes:Meso_0482 fumarate reductase/succinate dehydrogenase flavoprotein-like; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1535811 10363289 Psed_1464 Pseudonocardia dioxanivorans CB1190 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004331556.1 1534378 D 675635 CDS YP_004331557.1 331695318 10363290 complement(1535843..1537006) 1 NC_015312.1 KEGG: nml:Namu_2913 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1537006 10363290 Psed_1465 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004331557.1 1535843 R 675635 CDS YP_004331558.1 331695319 10363291 1537118..1537528 1 NC_015312.1 PFAM: Endoribonuclease L-PSP; KEGG: nml:Namu_2914 endoribonuclease L-PSP; endoribonuclease L-PSP 1537528 10363291 Psed_1466 Pseudonocardia dioxanivorans CB1190 endoribonuclease L-PSP YP_004331558.1 1537118 D 675635 CDS YP_004331559.1 331695320 10363292 1537555..1538916 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; KEGG: nml:Namu_2915 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 1538916 10363292 Psed_1467 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004331559.1 1537555 D 675635 CDS YP_004331560.1 331695321 10363293 complement(1538933..1539352) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: fri:FraEuI1c_3948 hypothetical protein; cupin 1539352 10363293 Psed_1468 Pseudonocardia dioxanivorans CB1190 cupin YP_004331560.1 1538933 R 675635 CDS YP_004331561.1 331695322 10363294 complement(1539474..1539938) 1 NC_015312.1 KEGG: fri:FraEuI1c_3435 hypothetical protein; hypothetical protein 1539938 10363294 Psed_1469 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331561.1 1539474 R 675635 CDS YP_004331562.1 331695323 10363295 complement(1539944..1540957) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: kfl:Kfla_3971 luciferase-like monooxygenase; luciferase-like protein 1540957 10363295 Psed_1470 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331562.1 1539944 R 675635 CDS YP_004331563.1 331695324 10363296 complement(1540954..1541340) 1 NC_015312.1 PFAM: Limonene-1,2-epoxide hydrolase; KEGG: rop:ROP_24950 hypothetical protein; limonene-12-epoxide hydrolase 1541340 10363296 Psed_1471 Pseudonocardia dioxanivorans CB1190 limonene-12-epoxide hydrolase YP_004331563.1 1540954 R 675635 CDS YP_004331564.1 331695325 10363297 complement(1541337..1542542) 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: jan:Jann_2272 cytochrome P450-like; cytochrome P450 1542542 10363297 Psed_1472 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004331564.1 1541337 R 675635 CDS YP_004331565.1 331695326 10363298 1542645..1543574 1 NC_015312.1 KEGG: fra:Francci3_2659 luciferase-like protein; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG2516, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 1543574 10363298 Psed_1473 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004331565.1 1542645 D 675635 CDS YP_004331566.1 331695327 10363299 1543779..1545251 1 NC_015312.1 KEGG: ccu:Ccur_13640 flavocytochrome c; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; succinate dehydrogenase 1545251 10363299 Psed_1474 Pseudonocardia dioxanivorans CB1190 succinate dehydrogenase YP_004331566.1 1543779 D 675635 CDS YP_004331567.1 331695328 10363300 1545308..1546336 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: tcu:Tcur_2704 luciferase-like monooxygenase; luciferase-like protein 1546336 10363300 Psed_1475 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331567.1 1545308 D 675635 CDS YP_004331568.1 331695329 10363301 1546333..1547391 1 NC_015312.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: swi:Swit_0294 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 1547391 10363301 Psed_1476 Pseudonocardia dioxanivorans CB1190 oxidoreductase domain-containing protein YP_004331568.1 1546333 D 675635 CDS YP_004331569.1 331695330 10363302 1547388..1548611 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: jan:Jann_2272 cytochrome P450-like; cytochrome P450 1548611 10363302 Psed_1477 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004331569.1 1547388 D 675635 CDS YP_004331570.1 331695331 10363303 1548619..1548843 1 NC_015312.1 PFAM: Ferredoxin soy-like; KEGG: sgr:SGR_263 ferredoxin; hypothetical protein 1548843 10363303 Psed_1478 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331570.1 1548619 D 675635 CDS YP_004331571.1 331695332 10363304 1548944..1549699 1 NC_015312.1 KEGG: tcu:Tcur_3385 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1549699 10363304 Psed_1479 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331571.1 1548944 D 675635 CDS YP_004331572.1 331695333 10363305 complement(1549751..1550389) 1 NC_015312.1 KEGG: rha:RHA1_ro00299 hypothetical protein; TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, HD subdomain; metal dependent phosphohydrolase 1550389 10363305 Psed_1480 Pseudonocardia dioxanivorans CB1190 metal dependent phosphohydrolase YP_004331572.1 1549751 R 675635 CDS YP_004331573.1 331695334 10363306 complement(1550515..1551525) 1 NC_015312.1 KEGG: sco:SCO0466 AraC family transcription regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 1551525 10363306 Psed_1481 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004331573.1 1550515 R 675635 CDS YP_004331574.1 331695335 10363307 complement(1551632..1552630) 1 NC_015312.1 KEGG: jan:Jann_2274 amidohydrolase 2; PFAM: Amidohydrolase 2; aminocarboxymuconate-semialdehyde decarboxylase 1552630 10363307 Psed_1482 Pseudonocardia dioxanivorans CB1190 aminocarboxymuconate-semialdehyde decarboxylase YP_004331574.1 1551632 R 675635 CDS YP_004331575.1 331695336 10363308 complement(1552623..1553984) 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: jan:Jann_2275 amidohydrolase; amidohydrolase 1553984 10363308 Psed_1483 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004331575.1 1552623 R 675635 CDS YP_004331576.1 331695337 10363309 1554278..1555054 1 NC_015312.1 KEGG: jan:Jann_2271 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1555054 10363309 Psed_1484 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331576.1 1554278 D 675635 CDS YP_004331577.1 331695338 10363310 1555114..1556013 1 NC_015312.1 PFAM: Transcription regulator TrmB, N-terminal; KEGG: sro:Sros_2039 helix-turn-helix family DUF118; transcriptional regulator TrmB 1556013 10363310 Psed_1485 Pseudonocardia dioxanivorans CB1190 transcriptional regulator TrmB YP_004331577.1 1555114 D 675635 CDS YP_004331578.1 331695339 10363311 complement(1556177..1557424) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rxy:Rxyl_2414 major facilitator transporter; major facilitator superfamily protein 1557424 10363311 Psed_1486 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331578.1 1556177 R 675635 CDS YP_004331579.1 331695340 10363312 complement(1557428..1558129) 1 NC_015312.1 KEGG: jan:Jann_2270 hypothetical protein; hypothetical protein 1558129 10363312 Psed_1487 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331579.1 1557428 R 675635 CDS YP_004331580.1 331695341 10363313 1558376..1559050 1 NC_015312.1 KEGG: rha:RHA1_ro02179 hypothetical protein; hypothetical protein 1559050 10363313 Psed_1488 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331580.1 1558376 D 675635 CDS YP_004331581.1 331695342 10363314 complement(1559550..1560962) 1 NC_015312.1 TIGRFAM: Benzoyl-CoA oxygenase, B subunit; KEGG: amd:AMED_8610 benzoyl-CoA oxygenase component B; benzoyl-CoA oxygenase subunit B 1560962 10363314 Psed_1489 Pseudonocardia dioxanivorans CB1190 benzoyl-CoA oxygenase subunit B YP_004331581.1 1559550 R 675635 CDS YP_004331582.1 331695343 10363315 complement(1560972..1562729) 1 NC_015312.1 KEGG: amd:AMED_8611 enoyl-CoA hydratase; TIGRFAM: Benzoyl-CoA-dihydrodiol lyase; PFAM: Crotonase, core; benzoyl-CoA-dihydrodiol lyase 1562729 10363315 Psed_1490 Pseudonocardia dioxanivorans CB1190 benzoyl-CoA-dihydrodiol lyase YP_004331582.1 1560972 R 675635 CDS YP_004331583.1 331695344 10363316 complement(1562819..1564417) 1 NC_015312.1 TIGRFAM: Benzoate-CoA ligase; KEGG: amd:AMED_8609 benzoate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; benzoate-CoA ligase 1564417 10363316 Psed_1491 Pseudonocardia dioxanivorans CB1190 benzoate-CoA ligase YP_004331583.1 1562819 R 675635 CDS YP_004331584.1 331695345 10363317 1564650..1565771 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: gbr:Gbro_3823 alcohol dehydrogenase GroES domain-containing protein; alcohol dehydrogenase 1565771 10363317 Psed_1492 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004331584.1 1564650 D 675635 CDS YP_004331585.1 331695346 10363318 1565845..1567785 1 NC_015312.1 KEGG: sti:Sthe_2861 ATPase associated with various cellular activities AAA_5; PFAM: ATPase, AAA-5; vWA containing CoxE-like; SMART: ATPase, AAA+ type, core; ATPase 1567785 10363318 Psed_1493 Pseudonocardia dioxanivorans CB1190 ATPase YP_004331585.1 1565845 D 675635 CDS YP_004331586.1 331695347 10363319 1567944..1568753 1 NC_015312.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: amd:AMED_7014 LmbE family protein; LmbE family protein 1568753 10363319 Psed_1494 Pseudonocardia dioxanivorans CB1190 LmbE family protein YP_004331586.1 1567944 D 675635 CDS YP_004331587.1 331695348 10363320 1568954..1570708 1 NC_015312.1 KEGG: amd:AMED_7729 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 1570708 10363320 Psed_1495 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase subunit I YP_004331587.1 1568954 D 675635 CDS YP_004331588.1 331695349 10363321 1570740..1572002 1 NC_015312.1 TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: sen:SACE_1188 phosphoserine phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; Amino acid-binding ACT; phosphoserine phosphatase SerB 1572002 10363321 Psed_1496 Pseudonocardia dioxanivorans CB1190 phosphoserine phosphatase SerB YP_004331588.1 1570740 D 675635 CDS YP_004331589.1 331695350 10363322 1571999..1572700 1 NC_015312.1 KEGG: amd:AMED_7727 hypothetical protein; hypothetical protein 1572700 10363322 Psed_1497 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331589.1 1571999 D 675635 CDS YP_004331590.1 331695351 10363323 complement(1572716..1573060) 1 NC_015312.1 KEGG: msp:Mspyr1_51770 hypothetical protein; hypothetical protein 1573060 10363323 Psed_1498 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331590.1 1572716 R 675635 CDS YP_004331591.1 331695352 10363324 complement(1573060..1573692) 1 NC_015312.1 TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: msp:Mspyr1_51780 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 1573692 10363324 Psed_1499 Pseudonocardia dioxanivorans CB1190 nitrile hydratase subunit alpha YP_004331591.1 1573060 R 675635 CDS YP_004331592.1 331695353 10363325 complement(1573689..1574444) 1 NC_015312.1 KEGG: msm:MSMEG_0377 nitrile hydratase; nitrile hydratase 1574444 10363325 Psed_1500 Pseudonocardia dioxanivorans CB1190 nitrile hydratase YP_004331592.1 1573689 R 675635 CDS YP_004331593.1 331695354 10363326 1574652..1575593 1 NC_015312.1 KEGG: mva:Mvan_5828 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 1575593 10363326 Psed_1501 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004331593.1 1574652 D 675635 CDS YP_004331594.1 331695355 10363327 complement(1575756..1577792) 1 NC_015312.1 SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: ami:Amir_0995 helicase C2; helicase c2 1577792 10363327 Psed_1502 Pseudonocardia dioxanivorans CB1190 helicase c2 YP_004331594.1 1575756 R 675635 CDS YP_004331595.1 331695356 10363328 1577987..1578874 1 NC_015312.1 KEGG: fri:FraEuI1c_5196 thioesterase superfamily protein; hypothetical protein 1578874 10363328 Psed_1503 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331595.1 1577987 D 675635 CDS YP_004331596.1 331695357 10363329 complement(1578973..1579521) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: ami:Amir_1003 isochorismatase hydrolase; isochorismatase hydrolase 1579521 10363329 Psed_1504 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004331596.1 1578973 R 675635 CDS YP_004331597.1 331695358 10363330 complement(1579523..1580830) 1 NC_015312.1 TIGRFAM: Nicotinate phosphoribosyltransferase KEGG: svi:Svir_29240 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 1580830 10363330 Psed_1505 Pseudonocardia dioxanivorans CB1190 nicotinate phosphoribosyltransferase YP_004331597.1 1579523 R 675635 CDS YP_004331598.1 331695359 10363331 1580887..1581183 1 NC_015312.1 KEGG: ami:Amir_1005 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adaptor protein ClpS; PFAM: Adaptor protein ClpS, core; ATP-dependent Clp protease adapter protein clpS 1581183 10363331 Psed_1506 Pseudonocardia dioxanivorans CB1190 ATP-dependent Clp protease adapter protein clpS YP_004331598.1 1580887 D 675635 CDS YP_004331599.1 331695360 10363332 1581197..1581754 1 NC_015312.1 PFAM: Domain of unknown function DUF2017; KEGG: svi:Svir_29220 protein of unknown function (DUF2017); hypothetical protein 1581754 10363332 Psed_1507 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331599.1 1581197 D 675635 CDS YP_004331600.1 331695361 10363333 complement(1581751..1582056) 1 NC_015312.1 TIGRFAM: Selenoprotein, Rdx type; KEGG: rha:RHA1_ro05355 hypothetical protein; selT/selW/selH selenoprotein domain-containing protein 1582056 10363333 Psed_1508 Pseudonocardia dioxanivorans CB1190 selT/selW/selH selenoprotein domain-containing protein YP_004331600.1 1581751 R 675635 CDS YP_004331601.1 331695362 10363334 1582143..1582616 1 NC_015312.1 KEGG: gob:Gobs_1356 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; Mov34/MPN/PAD-1 family protein 1582616 10363334 Psed_1509 Pseudonocardia dioxanivorans CB1190 Mov34/MPN/PAD-1 family protein YP_004331601.1 1582143 D 675635 CDS YP_004331602.1 331695363 10363335 1582685..1582960 1 NC_015312.1 PFAM: ThiamineS; KEGG: tpr:Tpau_1290 thiamineS protein; sulfur carrier protein ThiS 1582960 10363335 Psed_1510 Pseudonocardia dioxanivorans CB1190 sulfur carrier protein ThiS YP_004331602.1 1582685 D 675635 CDS YP_004331603.1 331695364 10363336 1583067..1584017 1 NC_015312.1 TIGRFAM: Cysteine synthase K/M; KEGG: sen:SACE_1206 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase 1584017 10363336 Psed_1511 Pseudonocardia dioxanivorans CB1190 cysteine synthase YP_004331603.1 1583067 D 675635 CDS YP_004331604.1 331695365 10363337 1584222..1584794 1 NC_015312.1 PFAM: Peptidase S54, rhomboid domain; KEGG: amd:AMED_7707 hypothetical protein; peptidase S54, rhomboid domain-containing protein 1584794 10363337 Psed_1512 Pseudonocardia dioxanivorans CB1190 peptidase S54, rhomboid domain-containing protein YP_004331604.1 1584222 D 675635 CDS YP_004331605.1 331695366 10363338 1584791..1585618 1 NC_015312.1 PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: mbo:Mb1373 glutamate racemase; glutamate racemase 1585618 10363338 Psed_1513 Pseudonocardia dioxanivorans CB1190 glutamate racemase YP_004331605.1 1584791 D 675635 CDS YP_004331606.1 331695367 10363339 complement(1585643..1586527) 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 1586527 10363339 Psed_1514 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004331606.1 1585643 R 675635 CDS YP_004331607.1 331695368 10363340 1586983..1587351 1 NC_015312.1 KEGG: gob:Gobs_5030 integral membrane protein; integral membrane protein 1587351 10363340 Psed_1515 Pseudonocardia dioxanivorans CB1190 integral membrane protein YP_004331607.1 1586983 D 675635 CDS YP_004331608.1 331695369 10363341 1587464..1587823 1 NC_015312.1 KEGG: kra:Krad_0154 integral membrane protein; integral membrane protein 1587823 10363341 Psed_1516 Pseudonocardia dioxanivorans CB1190 integral membrane protein YP_004331608.1 1587464 D 675635 CDS YP_004331609.1 331695370 10363342 1587848..1588636 1 NC_015312.1 KEGG: sen:SACE_1210 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 1588636 10363342 Psed_1517 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004331609.1 1587848 D 675635 CDS YP_004331610.1 331695371 10363343 complement(1588787..1589383) 1 NC_015312.1 KEGG: ami:Amir_1019 hypothetical protein; hypothetical protein 1589383 10363343 Psed_1518 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331610.1 1588787 R 675635 CDS YP_004331611.1 331695372 10363344 1589454..1590209 1 NC_015312.1 KEGG: sen:SACE_1212 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type; Ribonuclease PH 1590209 10363344 Psed_1519 Pseudonocardia dioxanivorans CB1190 Ribonuclease PH YP_004331611.1 1589454 D 675635 CDS YP_004331612.1 331695373 10363345 1590206..1590820 1 NC_015312.1 PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase; KEGG: sen:SACE_1213 Ham1-like protein; nucleoside-triphosphatase rdgB 1590820 10363345 Psed_1520 Pseudonocardia dioxanivorans CB1190 nucleoside-triphosphatase rdgB YP_004331612.1 1590206 D 675635 CDS YP_004331613.1 331695374 10363346 complement(1590982..1591386) 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: tcu:Tcur_3347 3-oxoadipate enol-lactonase; carboxymuconolactone decarboxylase 1591386 10363346 Psed_1521 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004331613.1 1590982 R 675635 CDS YP_004331614.1 331695375 10363347 1591516..1592229 1 NC_015312.1 PFAM: SNARE associated Golgi protein; KEGG: amd:AMED_2654 hypothetical protein; hypothetical protein 1592229 10363347 Psed_1522 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331614.1 1591516 D 675635 CDS YP_004331615.1 331695376 10363350 complement(1593008..1593475) 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: mjl:Mjls_3657 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1593475 10363350 Psed_1524 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004331615.1 1593008 R 675635 CDS YP_004331616.1 331695377 10363351 1593624..1593845 1 NC_015312.1 KEGG: ami:Amir_1029 hypothetical protein; hypothetical protein 1593845 10363351 Psed_1525 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331616.1 1593624 D 675635 CDS YP_004331617.1 331695378 10363352 complement(1593856..1595058) 1 NC_015312.1 KEGG: rop:ROP_61090 ferredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 1595058 10363352 Psed_1526 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004331617.1 1593856 R 675635 CDS YP_004331618.1 331695379 10363353 complement(1595152..1595931) 1 NC_015312.1 KEGG: svi:Svir_01790 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; SigB/F/G subfamily RNA polymerase sigma-28 subunit 1595931 10363353 Psed_1527 Pseudonocardia dioxanivorans CB1190 SigB/F/G subfamily RNA polymerase sigma-28 subunit YP_004331618.1 1595152 R 675635 CDS YP_004331619.1 331695380 10363354 complement(1595928..1596380) 1 NC_015312.1 KEGG: sen:SACE_4196 anti-sigma factor; anti-sigma factor 1596380 10363354 Psed_1528 Pseudonocardia dioxanivorans CB1190 anti-sigma factor YP_004331619.1 1595928 R 675635 CDS YP_004331620.1 331695381 10363355 1596879..1597544 1 NC_015312.1 hypothetical protein 1597544 10363355 Psed_1529 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331620.1 1596879 D 675635 CDS YP_004331621.1 331695382 10363356 complement(1597746..1598039) 1 NC_015312.1 PFAM: Transcription factor WhiB; KEGG: ami:Amir_6542 transcription factor WhiB; transcription factor WhiB 1598039 10363356 Psed_1530 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004331621.1 1597746 R 675635 CDS YP_004331622.1 331695383 10363357 complement(1598426..1598878) 1 NC_015312.1 KEGG: gob:Gobs_2116 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; anti-anti-sigma factor 1598878 10363357 Psed_1531 Pseudonocardia dioxanivorans CB1190 anti-anti-sigma factor YP_004331622.1 1598426 R 675635 CDS YP_004331623.1 331695384 10363358 complement(1598875..1600680) 1 NC_015312.1 KEGG: sen:SACE_3551 selenocysteine-specific translation elongation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 3; selenocysteine-specific translation elongation factor 1600680 10363358 Psed_1532 Pseudonocardia dioxanivorans CB1190 selenocysteine-specific translation elongation factor YP_004331623.1 1598875 R 675635 CDS YP_004331624.1 331695385 10363359 complement(1600685..1601995) 1 NC_015312.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: sro:Sros_3738 L-seryl-tRNA(sec) selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase; L-seryl-tRNA selenium transferase 1601995 10363359 Psed_1533 Pseudonocardia dioxanivorans CB1190 L-seryl-tRNA selenium transferase YP_004331624.1 1600685 R 675635 CDS YP_004331625.1 331695386 10363360 1602053..1603087 1 NC_015312.1 TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase, class I; KEGG: msm:MSMEG_1852 selenide, water dikinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; Selenide, water dikinase 1603087 10363360 Psed_1534 Pseudonocardia dioxanivorans CB1190 Selenide, water dikinase YP_004331625.1 1602053 D 675635 CDS YP_004331626.1 331695387 10363361 1603151..1604044 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 1604044 10363361 Psed_1535 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004331626.1 1603151 D 675635 CDS YP_004331627.1 331695388 10363362 complement(1604115..1604882) 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: fal:FRAAL3697 methyltransferase; type 12 methyltransferase 1604882 10363362 Psed_1536 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004331627.1 1604115 R 675635 CDS YP_004331628.1 331695389 10363363 complement(1605010..1606344) 1 NC_015312.1 PFAM: Amidase; KEGG: saq:Sare_0864 amidase; amidase 1606344 10363363 Psed_1537 Pseudonocardia dioxanivorans CB1190 amidase YP_004331628.1 1605010 R 675635 CDS YP_004331629.1 331695390 10363364 complement(1606479..1606871) 1 NC_015312.1 KEGG: gob:Gobs_2116 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 1606871 10363364 Psed_1538 Pseudonocardia dioxanivorans CB1190 anti-sigma-factor antagonist YP_004331629.1 1606479 R 675635 CDS YP_004331630.1 331695391 10363365 1607206..1608081 1 NC_015312.1 KEGG: cme:CMI243C plastid terminal oxidase; hypothetical protein 1608081 10363365 Psed_1539 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331630.1 1607206 D 675635 CDS YP_004331631.1 331695392 10363366 1608233..1609009 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_6806 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1609009 10363366 Psed_1540 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004331631.1 1608233 D 675635 CDS YP_004331632.1 331695393 10363367 1609006..1610727 1 NC_015312.1 KEGG: fri:FraEuI1c_6805 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 1610727 10363367 Psed_1541 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004331632.1 1609006 D 675635 CDS YP_004331633.1 331695394 10363368 1610729..1613089 1 NC_015312.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: fre:Franean1_6492 hypothetical protein; hypothetical protein 1613089 10363368 Psed_1542 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331633.1 1610729 D 675635 CDS YP_004331634.1 331695395 10363369 complement(1613158..1613937) 1 NC_015312.1 KEGG: amd:AMED_3094 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 1613937 10363369 Psed_1543 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004331634.1 1613158 R 675635 CDS YP_004331635.1 331695396 10363370 complement(1614045..1614827) 1 NC_015312.1 KEGG: bmd:BMD_5005 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1614827 10363370 Psed_1544 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331635.1 1614045 R 675635 CDS YP_004331636.1 331695397 10363371 1614977..1615444 1 NC_015312.1 KEGG: tro:trd_1682 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1615444 10363371 Psed_1545 Pseudonocardia dioxanivorans CB1190 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004331636.1 1614977 D 675635 CDS YP_004331637.1 331695398 10363372 1615446..1616843 1 NC_015312.1 PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; KEGG: rop:ROP_29700 acetyl-CoA carboxylase biotin carboxylase subunit; SMART: Biotin carboxylase, C-terminal; Biotin carboxylase 1616843 10363372 Psed_1546 Pseudonocardia dioxanivorans CB1190 Biotin carboxylase YP_004331637.1 1615446 D 675635 CDS YP_004331638.1 331695399 10363373 1616840..1618315 1 NC_015312.1 KEGG: rop:ROP_29690 carboxyltransferase; PFAM: Carboxylase, conserved domain; Pyruvate carboxyltransferase; pyruvate carboxylase 1618315 10363373 Psed_1547 Pseudonocardia dioxanivorans CB1190 pyruvate carboxylase YP_004331638.1 1616840 D 675635 CDS YP_004331639.1 331695400 10363374 1618382..1619107 1 NC_015312.1 KEGG: rop:ROP_29760 hypothetical protein; hypothetical protein 1619107 10363374 Psed_1548 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331639.1 1618382 D 675635 CDS YP_004331640.1 331695401 10363375 1619097..1620647 1 NC_015312.1 KEGG: rop:ROP_29750 hypothetical protein; hypothetical protein 1620647 10363375 Psed_1549 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331640.1 1619097 D 675635 CDS YP_004331641.1 331695402 10363376 1620734..1622209 1 NC_015312.1 KEGG: rop:ROP_29740 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1622209 10363376 Psed_1550 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004331641.1 1620734 D 675635 CDS YP_004331642.1 331695403 10363377 1622214..1622816 1 NC_015312.1 KEGG: rop:ROP_29730 hypothetical protein; hypothetical protein 1622816 10363377 Psed_1551 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331642.1 1622214 D 675635 CDS YP_004331643.1 331695404 10363378 1622834..1624609 1 NC_015312.1 KEGG: rop:ROP_29720 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; pyruvate, phosphate dikinase 1624609 10363378 Psed_1552 Pseudonocardia dioxanivorans CB1190 pyruvate, phosphate dikinase YP_004331643.1 1622834 D 675635 CDS YP_004331644.1 331695405 10363379 1624606..1625793 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: fri:FraEuI1c_4549 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 1625793 10363379 Psed_1553 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004331644.1 1624606 D 675635 CDS YP_004331645.1 331695406 10363380 1625790..1626533 1 NC_015312.1 KEGG: nml:Namu_2349 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 1626533 10363380 Psed_1554 Pseudonocardia dioxanivorans CB1190 protein tyrosine/serine phosphatase YP_004331645.1 1625790 D 675635 CDS YP_004331646.1 331695407 10363381 1626787..1628649 1 NC_015312.1 PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: nca:Noca_2395 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 1628649 10363381 Psed_1555 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004331646.1 1626787 D 675635 CDS YP_004331647.1 331695408 10363382 complement(1628749..1630776) 1 NC_015312.1 KEGG: amd:AMED_0311 NADPH-dependent 2,4-dienoyl-CoA reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 2,4-dienoyl-CoA reductase 1630776 10363382 Psed_1556 Pseudonocardia dioxanivorans CB1190 2,4-dienoyl-CoA reductase YP_004331647.1 1628749 R 675635 CDS YP_004331648.1 331695409 10363383 complement(1630872..1631330) 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: tcu:Tcur_0206 HxlR family transcriptional regulator; HxlR family transcriptional regulator 1631330 10363383 Psed_1557 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004331648.1 1630872 R 675635 CDS YP_004331649.1 331695410 10363384 1631467..1632156 1 NC_015312.1 PFAM: Domain of unknown function DUF125, transmembrane; KEGG: bcv:Bcav_2681 protein of unknown function DUF125 transmembrane; hypothetical protein 1632156 10363384 Psed_1558 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331649.1 1631467 D 675635 CDS YP_004331650.1 331695411 10363385 complement(1632286..1632945) 1 NC_015312.1 KEGG: fre:Franean1_6494 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 1632945 10363385 Psed_1559 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004331650.1 1632286 R 675635 CDS YP_004331651.1 331695412 10363386 1633311..1634375 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 1634375 10363386 Psed_1560 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004331651.1 1633311 D 675635 CDS YP_004331652.1 331695413 10363387 1634390..1635688 1 NC_015312.1 TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding; KEGG: mkm:Mkms_2751 competence damage-inducible protein A; SMART: Molybdopterin binding; competence/damage-inducible protein CinA 1635688 10363387 Psed_1561 Pseudonocardia dioxanivorans CB1190 competence/damage-inducible protein CinA YP_004331652.1 1634390 D 675635 CDS YP_004331653.1 331695414 10363388 complement(1635786..1636679) 1 NC_015312.1 KEGG: mtf:TBFG_13542 PE-PGRS family protein; hypothetical protein 1636679 10363388 Psed_1562 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331653.1 1635786 R 675635 CDS YP_004331654.1 331695415 10363389 complement(1636947..1637699) 1 NC_015312.1 KEGG: amd:AMED_0390 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 1637699 10363389 Psed_1563 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004331654.1 1636947 R 675635 CDS YP_004331655.1 331695416 10363390 1637769..1638950 1 NC_015312.1 KEGG: tcu:Tcur_2458 4-hydroxybenzoate 3-monooxygenase; PFAM: Monooxygenase, FAD-binding; 4-hydroxybenzoate 3-monooxygenase 1638950 10363390 Psed_1564 Pseudonocardia dioxanivorans CB1190 4-hydroxybenzoate 3-monooxygenase YP_004331655.1 1637769 D 675635 CDS YP_004331656.1 331695417 10363391 1638947..1639669 1 NC_015312.1 TIGRFAM: Protocatechuate 3,4-dioxygenase, beta subunit; KEGG: amd:AMED_1860 protocatechuate 3,4-dioxygenase, beta subunit; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; protocatechuate 3,4-dioxygenase subunit beta 1639669 10363391 Psed_1565 Pseudonocardia dioxanivorans CB1190 protocatechuate 3,4-dioxygenase subunit beta YP_004331656.1 1638947 D 675635 CDS YP_004331657.1 331695418 10363392 1639662..1640255 1 NC_015312.1 TIGRFAM: Protocatechuate 3,4-dioxygenase, alpha subunit; KEGG: svi:Svir_13020 protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; protocatechuate 3,4-dioxygenase subunit alpha 1640255 10363392 Psed_1566 Pseudonocardia dioxanivorans CB1190 protocatechuate 3,4-dioxygenase subunit alpha YP_004331657.1 1639662 D 675635 CDS YP_004331658.1 331695419 10363393 1640366..1640863 1 NC_015312.1 PFAM: GtrA-like protein; KEGG: sen:SACE_6097 glycosyl transferase; GtrA family protein 1640863 10363393 Psed_1567 Pseudonocardia dioxanivorans CB1190 GtrA family protein YP_004331658.1 1640366 D 675635 CDS YP_004331659.1 331695420 10363394 complement(1640833..1641621) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO0241 transcriptional regulator; TetR family transcriptional regulator 1641621 10363394 Psed_1568 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331659.1 1640833 R 675635 CDS YP_004331660.1 331695421 10363395 1641720..1642646 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: kfl:Kfla_5811 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1642646 10363395 Psed_1569 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004331660.1 1641720 D 675635 CDS YP_004331661.1 331695422 10363396 complement(1642678..1643850) 1 NC_015312.1 KEGG: fal:FRAAL3507 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 1643850 10363396 Psed_1570 Pseudonocardia dioxanivorans CB1190 acetyl-CoA hydrolase/transferase YP_004331661.1 1642678 R 675635 CDS YP_004331662.1 331695423 10363397 1643919..1644917 1 NC_015312.1 KEGG: cmi:CMM_2121 glutathione S-transferase; PFAM: Glutathione S-transferase, C-terminal; glutathione transferase 1644917 10363397 Psed_1571 Pseudonocardia dioxanivorans CB1190 glutathione transferase YP_004331662.1 1643919 D 675635 CDS YP_004331663.1 331695424 10363398 1644982..1646211 1 NC_015312.1 PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: svi:Svir_01720 beta-glucosidase-like glycosyl hydrolase; glycoside hydrolase protein 1646211 10363398 Psed_1572 Pseudonocardia dioxanivorans CB1190 glycoside hydrolase protein YP_004331663.1 1644982 D 675635 CDS YP_004331664.1 331695425 10363399 complement(1646334..1651955) 1 NC_015312.1 SMART: Biotin carboxylase, C-terminal; manually curated; KEGG: gob:Gobs_2423 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; Carboxyl transferase; biotin carboxylase 1651955 10363399 Psed_1573 Pseudonocardia dioxanivorans CB1190 biotin carboxylase YP_004331664.1 1646334 R 675635 CDS YP_004331665.1 331695426 10363400 1652170..1652724 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:blr2255 hypothetical protein; carboxymuconolactone decarboxylase 1652724 10363400 Psed_1574 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004331665.1 1652170 D 675635 CDS YP_004331666.1 331695427 10363401 complement(1652760..1653263) 1 NC_015312.1 hypothetical protein 1653263 10363401 Psed_1575 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331666.1 1652760 R 675635 CDS YP_004331667.1 331695428 10363402 1653372..1654538 1 NC_015312.1 KEGG: fri:FraEuI1c_6672 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 1654538 10363402 Psed_1576 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004331667.1 1653372 D 675635 CDS YP_004331668.1 331695429 10363403 1654559..1654960 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL3816 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1654960 10363403 Psed_1577 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004331668.1 1654559 D 675635 CDS YP_004331669.1 331695430 10363404 complement(1655030..1655440) 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: kfl:Kfla_3820 hypothetical protein; polyketide cyclase/dehydrase 1655440 10363404 Psed_1578 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004331669.1 1655030 R 675635 CDS YP_004331670.1 331695431 10363405 complement(1655478..1656062) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL3795 TetR family transcriptional regulator; TetR family transcriptional regulator 1656062 10363405 Psed_1579 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331670.1 1655478 R 675635 CDS YP_004331671.1 331695432 10363406 complement(1656059..1657573) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_7073 arabinose efflux permease-like protein; major facilitator superfamily protein 1657573 10363406 Psed_1580 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331671.1 1656059 R 675635 CDS YP_004331672.1 331695433 10363408 complement(1658248..1659198) 1 NC_015312.1 PFAM: Excalibur calcium-binding domain; KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA; excalibur domain-containing protein 1659198 10363408 Psed_1582 Pseudonocardia dioxanivorans CB1190 excalibur domain-containing protein YP_004331672.1 1658248 R 675635 CDS YP_004331673.1 331695434 10363409 1659389..1659781 1 NC_015312.1 KEGG: kfl:Kfla_5151 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 1659781 10363409 Psed_1583 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004331673.1 1659389 D 675635 CDS YP_004331674.1 331695435 10363410 1659895..1661268 1 NC_015312.1 KEGG: fra:Francci3_2843 diphosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase domain; 6-phosphofructokinase 1661268 10363410 Psed_1584 Pseudonocardia dioxanivorans CB1190 6-phosphofructokinase YP_004331674.1 1659895 D 675635 CDS YP_004331675.1 331695436 10363411 1661471..1662268 1 NC_015312.1 KEGG: amd:AMED_1324 hypothetical protein; hypothetical protein 1662268 10363411 Psed_1585 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331675.1 1661471 D 675635 CDS YP_004331676.1 331695437 10363412 1662265..1665066 1 NC_015312.1 PFAM: Membrane protein of unknown function; SNARE associated Golgi protein; KEGG: amd:AMED_1322 hypothetical protein; hypothetical protein 1665066 10363412 Psed_1586 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331676.1 1662265 D 675635 CDS YP_004331677.1 331695438 10363413 complement(1665201..1666694) 1 NC_015312.1 KEGG: gob:Gobs_4160 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 1666694 10363413 Psed_1587 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004331677.1 1665201 R 675635 CDS YP_004331678.1 331695439 10363414 1666837..1667736 1 NC_015312.1 KEGG: bpe:BP0285 acetyl esterase; hypothetical protein 1667736 10363414 Psed_1588 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331678.1 1666837 D 675635 CDS YP_004331679.1 331695440 10363415 1667865..1668644 1 NC_015312.1 KEGG: svi:Svir_04780 hypothetical protein; hypothetical protein 1668644 10363415 Psed_1589 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331679.1 1667865 D 675635 CDS YP_004331680.1 331695441 10363416 1668698..1669885 1 NC_015312.1 KEGG: nml:Namu_0044 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 1669885 10363416 Psed_1590 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004331680.1 1668698 D 675635 CDS YP_004331681.1 331695442 10363417 complement(1669934..1671637) 1 NC_015312.1 KEGG: sen:SACE_6340 trypsin-like serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 1671637 10363417 Psed_1591 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004331681.1 1669934 R 675635 CDS YP_004331682.1 331695443 10363418 1671782..1672147 1 NC_015312.1 KEGG: rop:ROP_03550 hypothetical protein; hypothetical protein 1672147 10363418 Psed_1592 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331682.1 1671782 D 675635 CDS YP_004331683.1 331695444 10363419 1672144..1672584 1 NC_015312.1 KEGG: mbt:JTY_1895 hypothetical protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 1672584 10363419 Psed_1593 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004331683.1 1672144 D 675635 CDS YP_004331684.1 331695445 10363420 1672809..1674032 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0016; KEGG: ami:Amir_2448 protein of unknown function UPF0016; hypothetical protein 1674032 10363420 Psed_1594 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331684.1 1672809 D 675635 CDS YP_004331685.1 331695446 10363422 complement(1674674..1676335) 1 NC_015312.1 KEGG: sds:SDEG_1595 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 1676335 10363422 Psed_1596 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004331685.1 1674674 R 675635 CDS YP_004331686.1 331695447 10363423 complement(1676411..1677037) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_0343 TetR-family protein transcriptional regulator; TetR family transcriptional regulator 1677037 10363423 Psed_1597 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331686.1 1676411 R 675635 CDS YP_004331687.1 331695448 10363424 1677133..1678284 1 NC_015312.1 KEGG: fal:FRAAL1666 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 1678284 10363424 Psed_1598 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004331687.1 1677133 D 675635 CDS YP_004331688.1 331695449 10363425 1678366..1679940 1 NC_015312.1 KEGG: afo:Afer_1027 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 1679940 10363425 Psed_1599 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004331688.1 1678366 D 675635 CDS YP_004331689.1 331695450 10363426 complement(1680007..1681047) 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: hne:HNE_1989 phosphotransferase enzyme family protein; aminoglycoside phosphotransferase 1681047 10363426 Psed_1600 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004331689.1 1680007 R 675635 CDS YP_004331690.1 331695451 10363427 complement(1681044..1682069) 1 NC_015312.1 KEGG: mva:Mvan_3374 aminoglycoside phosphotransferase; hypothetical protein 1682069 10363427 Psed_1601 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331690.1 1681044 R 675635 CDS YP_004331691.1 331695452 10363428 complement(1682066..1682632) 1 NC_015312.1 KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA; hypothetical protein 1682632 10363428 Psed_1602 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331691.1 1682066 R 675635 CDS YP_004331692.1 331695453 10363429 1682981..1684579 1 NC_015312.1 KEGG: mva:Mvan_0346 carboxyl transferase; PFAM: Carboxyl transferase; methylcrotonoyl-CoA carboxylase 1684579 10363429 Psed_1603 Pseudonocardia dioxanivorans CB1190 methylcrotonoyl-CoA carboxylase YP_004331692.1 1682981 D 675635 CDS YP_004331693.1 331695454 10363430 1684588..1686582 1 NC_015312.1 PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: mva:Mvan_0345 carbamoyl-phosphate synthase L chain, ATP-binding; SMART: Biotin carboxylase, C-terminal; methylcrotonoyl-CoA carboxylase 1686582 10363430 Psed_1604 Pseudonocardia dioxanivorans CB1190 methylcrotonoyl-CoA carboxylase YP_004331693.1 1684588 D 675635 CDS YP_004331694.1 331695455 10363431 1686653..1688224 1 NC_015312.1 KEGG: rpt:Rpal_3720 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1688224 10363431 Psed_1605 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004331694.1 1686653 D 675635 CDS YP_004331695.1 331695456 10363432 1688221..1689012 1 NC_015312.1 PFAM: Crotonase, core; KEGG: aac:Aaci_0815 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 1689012 10363432 Psed_1606 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004331695.1 1688221 D 675635 CDS YP_004331696.1 331695457 10363433 1689009..1690529 1 NC_015312.1 KEGG: rop:ROP_46660 acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1690529 10363433 Psed_1607 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004331696.1 1689009 D 675635 CDS YP_004331697.1 331695458 10363434 1690526..1691290 1 NC_015312.1 PFAM: Crotonase, core; KEGG: mjl:Mjls_3219 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 1691290 10363434 Psed_1608 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004331697.1 1690526 D 675635 CDS YP_004331698.1 331695459 10363435 1691294..1692079 1 NC_015312.1 KEGG: mgi:Mflv_4597 wyosine base formation; TIGRFAM: Conserved hypothetical protein CHP03084; Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Wyosine base formation; hypothetical protein 1692079 10363435 Psed_1609 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331698.1 1691294 D 675635 CDS YP_004331699.1 331695460 10363436 1692076..1693821 1 NC_015312.1 PFAM: Protein of unknown function DUF1446; KEGG: mgi:Mflv_4598 hypothetical protein; hypothetical protein 1693821 10363436 Psed_1610 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331699.1 1692076 D 675635 CDS YP_004331700.1 331695461 10363437 complement(1693907..1694479) 1 NC_015312.1 KEGG: fre:Franean1_3510 adenylate kinase; adenylate kinase 1694479 10363437 Psed_1611 Pseudonocardia dioxanivorans CB1190 adenylate kinase YP_004331700.1 1693907 R 675635 CDS YP_004331701.1 331695462 10363438 complement(1694493..1695344) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sgr:SGR_2246 hydrolase; alpha/beta hydrolase 1695344 10363438 Psed_1612 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331701.1 1694493 R 675635 CDS YP_004331702.1 331695463 10363439 complement(1695448..1695759) 1 NC_015312.1 KEGG: svi:Svir_33240 hypothetical protein; hypothetical protein 1695759 10363439 Psed_1613 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331702.1 1695448 R 675635 CDS YP_004331703.1 331695464 10363440 complement(1695955..1698225) 1 NC_015312.1 KEGG: bfa:Bfae_09180 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 1698225 10363440 Psed_1614 Pseudonocardia dioxanivorans CB1190 cell envelope-related transcriptional attenuator YP_004331703.1 1695955 R 675635 CDS YP_004331704.1 331695465 10363441 1698609..1699457 1 NC_015312.1 KEGG: afw:Anae109_2271 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00268; PFAM: Asparagine synthase; hypothetical protein 1699457 10363441 Psed_1615 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331704.1 1698609 D 675635 CDS YP_004331705.1 331695466 10363442 1699454..1700722 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0272; Phosphoribosylaminoimidazole carboxylase, core; KEGG: cai:Caci_4916 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; hypothetical protein 1700722 10363442 Psed_1616 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331705.1 1699454 D 675635 CDS YP_004331706.1 331695467 10363443 complement(1700632..1701108) 1 NC_015312.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: gct:GC56T3_1846 OsmC family protein; OsmC family protein 1701108 10363443 Psed_1617 Pseudonocardia dioxanivorans CB1190 OsmC family protein YP_004331706.1 1700632 R 675635 CDS YP_004331707.1 331695468 10363444 1701203..1701562 1 NC_015312.1 hypothetical protein 1701562 10363444 Psed_1618 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331707.1 1701203 D 675635 CDS YP_004331708.1 331695469 10363445 1701577..1702371 1 NC_015312.1 KEGG: cwo:Cwoe_0088 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA; phosphosulfolactate synthase 1702371 10363445 Psed_1619 Pseudonocardia dioxanivorans CB1190 phosphosulfolactate synthase YP_004331708.1 1701577 D 675635 CDS YP_004331709.1 331695470 10363446 1702368..1703435 1 NC_015312.1 KEGG: nca:Noca_4838 hypothetical protein; hypothetical protein 1703435 10363446 Psed_1620 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331709.1 1702368 D 675635 CDS YP_004331710.1 331695471 10363447 1703420..1704775 1 NC_015312.1 PFAM: Lyase 1, N-terminal; KEGG: nca:Noca_4818 fumarate lyase; Fumarate lyase 1704775 10363447 Psed_1621 Pseudonocardia dioxanivorans CB1190 Fumarate lyase YP_004331710.1 1703420 D 675635 CDS YP_004331711.1 331695472 10363448 1704772..1705755 1 NC_015312.1 KEGG: nca:Noca_4819 D-cysteine desulfhydrase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; 1-aminocyclopropane-1-carboxylate deaminase 1705755 10363448 Psed_1622 Pseudonocardia dioxanivorans CB1190 1-aminocyclopropane-1-carboxylate deaminase YP_004331711.1 1704772 D 675635 CDS YP_004331712.1 331695473 10363449 1705752..1707257 1 NC_015312.1 TIGRFAM: Argininosuccinate lyase; KEGG: nca:Noca_4820 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; argininosuccinate lyase 1707257 10363449 Psed_1623 Pseudonocardia dioxanivorans CB1190 argininosuccinate lyase YP_004331712.1 1705752 D 675635 CDS YP_004331713.1 331695474 10363450 1707443..1708777 1 NC_015312.1 KEGG: chl:Chy400_3865 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; CoA-disulfide reductase 1708777 10363450 Psed_1624 Pseudonocardia dioxanivorans CB1190 CoA-disulfide reductase YP_004331713.1 1707443 D 675635 CDS YP_004331714.1 331695475 10363451 1708784..1709611 1 NC_015312.1 KEGG: bge:BC1002_5635 hypothetical protein; hypothetical protein 1709611 10363451 Psed_1625 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331714.1 1708784 D 675635 CDS YP_004331715.1 331695476 10363452 1709725..1710339 1 NC_015312.1 hypothetical protein 1710339 10363452 Psed_1626 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331715.1 1709725 D 675635 CDS YP_004331716.1 331695477 10363453 1710336..1710842 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: azc:AZC_0070 histone acetyltransferase; GCN5-like N-acetyltransferase 1710842 10363453 Psed_1627 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004331716.1 1710336 D 675635 CDS YP_004331717.1 331695478 10363454 complement(1711067..1714255) 1 NC_015312.1 KEGG: tbi:Tbis_2669 winged helix family transcriptional regulator ATPase; PFAM: Signal transduction response regulator, C-terminal; Bacterial transcriptional activator domain; ATPase domain, prokaryote; Tetratricopeptide TPR-1; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat; winged helix family transcriptional regulator 1714255 10363454 Psed_1628 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004331717.1 1711067 R 675635 CDS YP_004331718.1 331695479 10363455 complement(1714464..1714865) 1 NC_015312.1 KEGG: gob:Gobs_2618 hypothetical protein; hypothetical protein 1714865 10363455 Psed_1629 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331718.1 1714464 R 675635 CDS YP_004331719.1 331695480 10363456 complement(1714894..1715511) 1 NC_015312.1 TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: pva:Pvag_pPag20175 nitrile hydratase alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 1715511 10363456 Psed_1630 Pseudonocardia dioxanivorans CB1190 nitrile hydratase subunit alpha YP_004331719.1 1714894 R 675635 CDS YP_004331720.1 331695481 10363457 complement(1715508..1716191) 1 NC_015312.1 KEGG: rpb:RPB_2705 nitrile hydratase; nitrile hydratase 1716191 10363457 Psed_1631 Pseudonocardia dioxanivorans CB1190 nitrile hydratase YP_004331720.1 1715508 R 675635 CDS YP_004331721.1 331695482 10363458 complement(1716379..1716894) 1 NC_015312.1 KEGG: nml:Namu_5382 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 1716894 10363458 Psed_1632 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004331721.1 1716379 R 675635 CDS YP_004331722.1 331695483 10363459 1716942..1717370 1 NC_015312.1 KEGG: sen:SACE_3300 hypothetical protein; hypothetical protein 1717370 10363459 Psed_1633 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331722.1 1716942 D 675635 CDS YP_004331723.1 331695484 10363460 complement(1717407..1718936) 1 NC_015312.1 KEGG: gob:Gobs_0281 phytochrome sensor protein; PFAM: Signal transduction response regulator, C-terminal; GAF; SMART: Signal transduction response regulator, C-terminal; phytochrome sensor protein 1718936 10363460 Psed_1634 Pseudonocardia dioxanivorans CB1190 phytochrome sensor protein YP_004331723.1 1717407 R 675635 CDS YP_004331724.1 331695485 10363461 1719129..1719863 1 NC_015312.1 KEGG: sen:SACE_2381 response regulator, two-component system; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 1719863 10363461 Psed_1635 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004331724.1 1719129 D 675635 CDS YP_004331725.1 331695486 10363462 1720039..1720755 1 NC_015312.1 KEGG: bph:Bphy_6084 XRE family transcriptional regulator; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; cupin 1720755 10363462 Psed_1636 Pseudonocardia dioxanivorans CB1190 cupin YP_004331725.1 1720039 D 675635 CDS YP_004331726.1 331695487 10363463 1720755..1721741 1 NC_015312.1 PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; KEGG: bcv:Bcav_4029 2-dehydropantoate 2-reductase; ketopantoate reductase ApbA/PanE domain-containing protein 1721741 10363463 Psed_1637 Pseudonocardia dioxanivorans CB1190 ketopantoate reductase ApbA/PanE domain-containing protein YP_004331726.1 1720755 D 675635 CDS YP_004331727.1 331695488 10363464 complement(1721777..1722163) 1 NC_015312.1 KEGG: kra:Krad_0790 hypothetical protein; hypothetical protein 1722163 10363464 Psed_1638 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331727.1 1721777 R 675635 CDS YP_004331728.1 331695489 10363465 1723002..1723325 1 NC_015312.1 hypothetical protein 1723325 10363465 Psed_1639 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331728.1 1723002 D 675635 CDS YP_004331729.1 331695490 10363466 1723328..1725184 1 NC_015312.1 KEGG: sen:SACE_5910 hypothetical protein; hypothetical protein 1725184 10363466 Psed_1640 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331729.1 1723328 D 675635 CDS YP_004331730.1 331695491 10363467 1725168..1727900 1 NC_015312.1 KEGG: sen:SACE_5909 hypothetical protein; hypothetical protein 1727900 10363467 Psed_1641 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331730.1 1725168 D 675635 CDS YP_004331731.1 331695492 10363468 1727916..1729196 1 NC_015312.1 PFAM: Domain of unknown function DUF395, YeeE/YedE; KEGG: sen:SACE_1782 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 1729196 10363468 Psed_1642 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331731.1 1727916 D 675635 CDS YP_004331732.1 331695493 10363469 1729228..1729473 1 NC_015312.1 hypothetical protein 1729473 10363469 Psed_1643 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331732.1 1729228 D 675635 CDS YP_004331733.1 331695494 10363470 complement(1729916..1730941) 1 NC_015312.1 TIGRFAM: Phosphofructokinase, pyrophosphate dependent; HAMAP: Phosphofructokinase; KEGG: sco:SCO2119 6-phosphofructokinase; PFAM: Phosphofructokinase domain; 6-phosphofructokinase 1730941 10363470 Psed_1644 Pseudonocardia dioxanivorans CB1190 6-phosphofructokinase YP_004331733.1 1729916 R 675635 CDS YP_004331734.1 331695495 10363471 complement(1731093..1731803) 1 NC_015312.1 HAMAP: Peptidase S14, ClpP; KEGG: svi:Svir_12180 ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit 1731803 10363471 Psed_1645 Pseudonocardia dioxanivorans CB1190 ATP-dependent Clp protease proteolytic subunit YP_004331734.1 1731093 R 675635 CDS YP_004331735.1 331695496 10363472 1731962..1732390 1 NC_015312.1 KEGG: stp:Strop_3944 hypothetical protein; hypothetical protein 1732390 10363472 Psed_1646 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331735.1 1731962 D 675635 CDS YP_004331736.1 331695497 10363473 complement(1732407..1733282) 1 NC_015312.1 KEGG: svi:Svir_27870 hypothetical protein; hypothetical protein 1733282 10363473 Psed_1647 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331736.1 1732407 R 675635 CDS YP_004331737.1 331695498 10363474 complement(1733443..1734756) 1 NC_015312.1 KEGG: svi:Svir_27870 hypothetical protein; hypothetical protein 1734756 10363474 Psed_1648 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331737.1 1733443 R 675635 CDS YP_004331738.1 331695499 10363475 1735295..1736173 1 NC_015312.1 PFAM: Pentapeptide repeat; KEGG: sro:Sros_5479 hypothetical protein; pentapeptide repeat-containing protein 1736173 10363475 Psed_1649 Pseudonocardia dioxanivorans CB1190 pentapeptide repeat-containing protein YP_004331738.1 1735295 D 675635 CDS YP_004331739.1 331695500 10363476 complement(1736295..1737221) 1 NC_015312.1 KEGG: sma:SAV_7424 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1737221 10363476 Psed_1650 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331739.1 1736295 R 675635 CDS YP_004331740.1 331695501 10363477 1737336..1737818 1 NC_015312.1 KEGG: cwo:Cwoe_3822 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1737818 10363477 Psed_1651 Pseudonocardia dioxanivorans CB1190 alkylhydroperoxidase YP_004331740.1 1737336 D 675635 CDS YP_004331741.1 331695502 10363478 complement(1738050..1740029) 1 NC_015312.1 PFAM: Protein of unknown function DUF477; KEGG: gob:Gobs_0486 hypothetical protein; hypothetical protein 1740029 10363478 Psed_1652 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331741.1 1738050 R 675635 CDS YP_004331742.1 331695503 10363479 complement(1740136..1741440) 1 NC_015312.1 KEGG: sen:SACE_1164 hypothetical protein; hypothetical protein 1741440 10363479 Psed_1653 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331742.1 1740136 R 675635 CDS YP_004331743.1 331695504 10363480 complement(1741440..1741934) 1 NC_015312.1 KEGG: kfl:Kfla_1656 hypothetical protein; hypothetical protein 1741934 10363480 Psed_1654 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331743.1 1741440 R 675635 CDS YP_004331744.1 331695505 10363481 complement(1741931..1742884) 1 NC_015312.1 KEGG: fre:Franean1_7244 hypothetical protein; hypothetical protein 1742884 10363481 Psed_1655 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331744.1 1741931 R 675635 CDS YP_004331745.1 331695506 10363482 complement(1743021..1743761) 1 NC_015312.1 KEGG: ret:RHE_CH03437 hypothetical protein; hypothetical protein 1743761 10363482 Psed_1656 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331745.1 1743021 R 675635 CDS YP_004331746.1 331695507 10363483 complement(1743774..1743983) 1 NC_015312.1 PFAM: Cobalt transporter subunit CbtB, KEGG: bgf:BC1003_4412 hypothetical protein; cobalt transporter subunit CbtB 1743983 10363483 Psed_1657 Pseudonocardia dioxanivorans CB1190 cobalt transporter subunit CbtB YP_004331746.1 1743774 R 675635 CDS YP_004331747.1 331695508 10363484 1744298..1746466 1 NC_015312.1 PFAM: Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase, Fe4S4 domain; Molybdopterin oxidoreductase; KEGG: rsl:RPSI07_2642 molybdopterin oxidoreductase; nitrate reductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; trimethylamine-N-oxide reductase (cytochrome c) 1746466 10363484 Psed_1658 Pseudonocardia dioxanivorans CB1190 trimethylamine-N-oxide reductase (cytochrome c) YP_004331747.1 1744298 D 675635 CDS YP_004331748.1 331695509 10363485 complement(1746463..1747407) 1 NC_015312.1 KEGG: rop:ROP_58480 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 1747407 10363485 Psed_1659 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004331748.1 1746463 R 675635 CDS YP_004331749.1 331695510 10363487 complement(1747839..1748642) 1 NC_015312.1 PFAM: Domain of unknown function DUF305; KEGG: ami:Amir_6160 protein of unknown function DUF305; hypothetical protein 1748642 10363487 Psed_1660 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331749.1 1747839 R 675635 CDS YP_004331750.1 331695511 10363488 complement(1748639..1749673) 1 NC_015312.1 KEGG: svi:Svir_29990 hypothetical protein; hypothetical protein 1749673 10363488 Psed_1661 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331750.1 1748639 R 675635 CDS YP_004331751.1 331695512 10363489 1749702..1751345 1 NC_015312.1 KEGG: sen:SACE_6300 arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; arginyl-tRNA synthetase 1751345 10363489 Psed_1662 Pseudonocardia dioxanivorans CB1190 arginyl-tRNA synthetase YP_004331751.1 1749702 D 675635 CDS YP_004331752.1 331695513 10363490 1751342..1752841 1 NC_015312.1 TIGRFAM: Diaminopimelate decarboxylase; KEGG: sen:SACE_6299 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; diaminopimelate decarboxylase 1752841 10363490 Psed_1663 Pseudonocardia dioxanivorans CB1190 diaminopimelate decarboxylase YP_004331752.1 1751342 D 675635 CDS YP_004331753.1 331695514 10363491 1753066..1754436 1 NC_015312.1 PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: amd:AMED_7795 homoserine dehydrogenase; homoserine dehydrogenase 1754436 10363491 Psed_1664 Pseudonocardia dioxanivorans CB1190 homoserine dehydrogenase YP_004331753.1 1753066 D 675635 CDS YP_004331754.1 331695515 10363492 1754510..1755598 1 NC_015312.1 TIGRFAM: Threonine synthase; KEGG: amd:AMED_7794 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 1755598 10363492 Psed_1665 Pseudonocardia dioxanivorans CB1190 threonine synthase YP_004331754.1 1754510 D 675635 CDS YP_004331755.1 331695516 10363493 1755598..1756506 1 NC_015312.1 TIGRFAM: Homoserine kinase; HAMAP: Homoserine kinase; KEGG: sen:SACE_6296 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; Homoserine kinase 1756506 10363493 Psed_1666 Pseudonocardia dioxanivorans CB1190 Homoserine kinase YP_004331755.1 1755598 D 675635 CDS YP_004331756.1 331695517 10363494 1756859..1759240 1 NC_015312.1 TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: gob:Gobs_4150 transcription termination factor Rho; SMART: Rho termination factor, N-terminal; Cold shock protein; ATPase, AAA+ type, core; transcription termination factor Rho 1759240 10363494 Psed_1667 Pseudonocardia dioxanivorans CB1190 transcription termination factor Rho YP_004331756.1 1756859 D 675635 CDS YP_004331757.1 331695518 10363495 1759395..1759616 1 NC_015312.1 TIGRFAM: Ribosomal protein L31; HAMAP: Ribosomal protein L31; KEGG: ami:Amir_6151 ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 1759616 10363495 Psed_1668 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L31 YP_004331757.1 1759395 D 675635 CDS YP_004331758.1 331695519 10363496 1759691..1760791 1 NC_015312.1 SMART: Peptide chain release factor; TIGRFAM: Peptide chain release factor 1; KEGG: ami:Amir_6150 peptide chain release factor 1; HAMAP: Peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; peptide chain release factor 1 1760791 10363496 Psed_1669 Pseudonocardia dioxanivorans CB1190 peptide chain release factor 1 YP_004331758.1 1759691 D 675635 CDS YP_004331759.1 331695520 10363497 1760826..1761701 1 NC_015312.1 KEGG: sen:SACE_6291 methyltransferase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase 1761701 10363497 Psed_1670 Pseudonocardia dioxanivorans CB1190 protein-(glutamine-N5) methyltransferase YP_004331759.1 1760826 D 675635 CDS YP_004331760.1 331695521 10363498 1761744..1762388 1 NC_015312.1 KEGG: ami:Amir_6146 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 1762388 10363498 Psed_1671 Pseudonocardia dioxanivorans CB1190 Sua5/YciO/YrdC/YwlC family protein YP_004331760.1 1761744 D 675635 CDS YP_004331761.1 331695522 10363500 complement(1763044..1763730) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tcu:Tcur_4146 TetR family transcriptional regulator; TetR family transcriptional regulator 1763730 10363500 Psed_1673 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331761.1 1763044 R 675635 CDS YP_004331762.1 331695523 10363501 1763844..1765124 1 NC_015312.1 KEGG: fal:FRAAL5942 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 1765124 10363501 Psed_1674 Pseudonocardia dioxanivorans CB1190 glycine hydroxymethyltransferase YP_004331762.1 1763844 D 675635 CDS YP_004331763.1 331695524 10363502 1765137..1766342 1 NC_015312.1 PFAM: Glycosyl transferase, family 4; KEGG: sen:SACE_6288 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; glycosyl transferase protein 1766342 10363502 Psed_1675 Pseudonocardia dioxanivorans CB1190 glycosyl transferase protein YP_004331763.1 1765137 D 675635 CDS YP_004331764.1 331695525 10363503 1766537..1766755 1 NC_015312.1 hypothetical protein 1766755 10363503 Psed_1676 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331764.1 1766537 D 675635 CDS YP_004331765.1 331695526 10363504 1766802..1767206 1 NC_015312.1 KEGG: srt:Srot_0692 ATP synthase I; ATP synthase I 1767206 10363504 Psed_1677 Pseudonocardia dioxanivorans CB1190 ATP synthase I YP_004331765.1 1766802 D 675635 CDS YP_004331766.1 331695527 10363505 1767203..1767937 1 NC_015312.1 TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATPase, F0 complex, subunit A; KEGG: srt:Srot_0693 ATP synthase F0 subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 1767937 10363505 Psed_1678 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit a YP_004331766.1 1767203 D 675635 CDS YP_004331767.1 331695528 10363506 1768045..1768320 1 NC_015312.1 TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: ace:Acel_0648 F0F1 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 1768320 10363506 Psed_1679 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit c YP_004331767.1 1768045 D 675635 CDS YP_004331768.1 331695529 10363507 1768328..1768882 1 NC_015312.1 TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: amd:AMED_7779 F-type H+-transporting ATPase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 1768882 10363507 Psed_1680 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit b YP_004331768.1 1768328 D 675635 CDS YP_004331769.1 331695530 10363508 1768882..1769409 1 NC_015312.1 TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: mjl:Mjls_3865 F0F1 ATP synthase subunit delta; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 1769409 10363508 Psed_1681 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit b YP_004331769.1 1768882 D 675635 CDS YP_004331770.1 331695531 10363509 1769409..1770251 1 NC_015312.1 TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: msp:Mspyr1_17470 ATP synthase, F1 delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta 1770251 10363509 Psed_1682 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit delta YP_004331770.1 1769409 D 675635 CDS YP_004331771.1 331695532 10363510 1770316..1771959 1 NC_015312.1 TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: msm:MSMEG_4938 F0F1 ATP synthase subunit alpha; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha 1771959 10363510 Psed_1683 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit alpha YP_004331771.1 1770316 D 675635 CDS YP_004331772.1 331695533 10363511 1771973..1772971 1 NC_015312.1 TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATPase, F1 complex, gamma subunit; KEGG: msm:MSMEG_4937 F0F1 ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma 1772971 10363511 Psed_1684 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit gamma YP_004331772.1 1771973 D 675635 CDS YP_004331773.1 331695534 10363512 1772971..1774398 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: ami:Amir_6136 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 1774398 10363512 Psed_1685 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit beta YP_004331773.1 1772971 D 675635 CDS YP_004331774.1 331695535 10363513 1774418..1774798 1 NC_015312.1 TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: svi:Svir_29540 F0F1 ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATP synthase subunit epsilon 1774798 10363513 Psed_1686 Pseudonocardia dioxanivorans CB1190 ATP synthase subunit epsilon YP_004331774.1 1774418 D 675635 CDS YP_004331775.1 331695536 10363514 1774836..1775273 1 NC_015312.1 PFAM: Protein of unknown function DUF2550; KEGG: ami:Amir_6134 hypothetical protein; hypothetical protein 1775273 10363514 Psed_1687 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331775.1 1774836 D 675635 CDS YP_004331776.1 331695537 10363515 complement(1775283..1775885) 1 NC_015312.1 TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; KEGG: fal:FRAAL5927 adenosylcobalamin-dependent diol dehydratase gamma subunit; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; ATP/cobalamin adenosyltransferase 1775885 10363515 Psed_1688 Pseudonocardia dioxanivorans CB1190 ATP/cobalamin adenosyltransferase YP_004331776.1 1775283 R 675635 CDS YP_004331777.1 331695538 10363516 1776000..1777268 1 NC_015312.1 PFAM: Enolpyruvate transferase domain; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: ami:Amir_6132 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1777268 10363516 Psed_1689 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004331777.1 1776000 D 675635 CDS YP_004331778.1 331695539 10363517 1777406..1778218 1 NC_015312.1 PFAM: Domain of unknown function DUF1206; KEGG: gob:Gobs_3823 hypothetical protein; hypothetical protein 1778218 10363517 Psed_1690 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331778.1 1777406 D 675635 CDS YP_004331779.1 331695540 10363518 1778288..1780279 1 NC_015312.1 TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: gob:Gobs_4128 methylmalonyl-CoA mutase large subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; methylmalonyl-CoA mutase large subunit 1780279 10363518 Psed_1691 Pseudonocardia dioxanivorans CB1190 methylmalonyl-CoA mutase large subunit YP_004331779.1 1778288 D 675635 CDS YP_004331780.1 331695541 10363519 complement(1780312..1781136) 1 NC_015312.1 PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; KEGG: sen:SACE_3078 hypothetical protein; ribulose bisphosphate carboxylase large chain 1781136 10363519 Psed_1692 Pseudonocardia dioxanivorans CB1190 ribulose bisphosphate carboxylase large chain YP_004331780.1 1780312 R 675635 CDS YP_004331781.1 331695542 10363520 1781401..1782303 1 NC_015312.1 TIGRFAM: Ectoine/hydroxyEctoine ABC transporter solute-binding protein; Twin-arginine translocation pathway, signal sequence; PFAM: Extracellular solute-binding protein, family 3; KEGG: svi:Svir_29490 ectoine/hydroxyectoine ABC transporter solute-binding protein; SMART: Extracellular solute-binding protein, family 3; ectoine/hydroxyectoine ABC transporter solute-binding protein 1782303 10363520 Psed_1693 Pseudonocardia dioxanivorans CB1190 ectoine/hydroxyectoine ABC transporter solute-binding protein YP_004331781.1 1781401 D 675635 CDS YP_004331782.1 331695543 10363521 1782319..1783029 1 NC_015312.1 KEGG: svi:Svir_29480 amino acid ABC transporter membrane protein; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease EhuC; Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; ectoine/hydroxyectoine ABC transporter permease EhuC 1783029 10363521 Psed_1694 Pseudonocardia dioxanivorans CB1190 ectoine/hydroxyectoine ABC transporter permease EhuC YP_004331782.1 1782319 D 675635 CDS YP_004331783.1 331695544 10363522 1783026..1783682 1 NC_015312.1 KEGG: svi:Svir_29470 amino acid ABC transporter membrane protein; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease EhuD; Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; ectoine/hydroxyectoine ABC transporter permease EhuD 1783682 10363522 Psed_1695 Pseudonocardia dioxanivorans CB1190 ectoine/hydroxyectoine ABC transporter permease EhuD YP_004331783.1 1783026 D 675635 CDS YP_004331784.1 331695545 10363523 1783669..1784460 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, ATP-binding protein; KEGG: svi:Svir_29460 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ectoine/hydroxyectoine ABC transporter ATP-binding protein 1784460 10363523 Psed_1696 Pseudonocardia dioxanivorans CB1190 ectoine/hydroxyectoine ABC transporter ATP-binding protein YP_004331784.1 1783669 D 675635 CDS YP_004331785.1 331695546 10363524 complement(1784470..1785339) 1 NC_015312.1 KEGG: svi:Svir_29490 ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein 1785339 10363524 Psed_1697 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331785.1 1784470 R 675635 CDS YP_004331786.1 331695547 10363525 complement(1785477..1786250) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: svi:Svir_29450 enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase 1786250 10363525 Psed_1698 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004331786.1 1785477 R 675635 CDS YP_004331787.1 331695548 10363526 1786264..1787019 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nda:Ndas_0675 transcriptional regulator, TetR family; TetR family transcriptional regulator 1787019 10363526 Psed_1699 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331787.1 1786264 D 675635 CDS YP_004331788.1 331695549 10363527 1787060..1788301 1 NC_015312.1 KEGG: tbi:Tbis_2110 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 1788301 10363527 Psed_1700 Pseudonocardia dioxanivorans CB1190 linalool 8-monooxygenase YP_004331788.1 1787060 D 675635 CDS YP_004331789.1 331695550 10363528 1788664..1789398 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: mav:MAV_2728 hypothetical protein; type 11 methyltransferase 1789398 10363528 Psed_1701 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331789.1 1788664 D 675635 CDS YP_004331790.1 331695551 10363529 complement(1789392..1790549) 1 NC_015312.1 KEGG: sen:SACE_3243 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 1790549 10363529 Psed_1702 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004331790.1 1789392 R 675635 CDS YP_004331791.1 331695552 10363530 complement(1790536..1791096) 1 NC_015312.1 KEGG: msp:Mspyr1_16060 NUDIX family protein; manually curated; PFAM: NUDIX hydrolase domain; NUDIX hydrolase 1791096 10363530 Psed_1703 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004331791.1 1790536 R 675635 CDS YP_004331792.1 331695553 10363531 1791126..1792091 1 NC_015312.1 manually curated; KEGG: svi:Svir_36430 predicted transcriptional regulator; transcriptional regulator 1792091 10363531 Psed_1704 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004331792.1 1791126 D 675635 CDS YP_004331793.1 331695554 10363532 complement(1792109..1793302) 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: gob:Gobs_2674 amidohydrolase; amidohydrolase 1793302 10363532 Psed_1705 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004331793.1 1792109 R 675635 CDS YP_004331794.1 331695555 10363533 1793368..1796190 1 NC_015312.1 KEGG: fri:FraEuI1c_4888 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1796190 10363533 Psed_1706 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004331794.1 1793368 D 675635 CDS YP_004331795.1 331695556 10363534 1796201..1796860 1 NC_015312.1 KEGG: ami:Amir_6124 hypothetical protein; HAMAP: Uncharacterised protein family UPF0286; PFAM: Uncharacterised protein family UPF0286; hypothetical protein 1796860 10363534 Psed_1707 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331795.1 1796201 D 675635 CDS YP_004331796.1 331695557 10363535 1797018..1798085 1 NC_015312.1 KEGG: gob:Gobs_1833 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase 1798085 10363535 Psed_1708 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004331796.1 1797018 D 675635 CDS YP_004331797.1 331695558 10363536 1798158..1799630 1 NC_015312.1 PFAM: Aldehyde dehydrogenase domain; KEGG: sen:SACE_6249 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 1799630 10363536 Psed_1709 Pseudonocardia dioxanivorans CB1190 aldehyde dehydrogenase YP_004331797.1 1798158 D 675635 CDS YP_004331798.1 331695559 10363537 1799758..1801542 1 NC_015312.1 KEGG: amd:AMED_7745 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxyacyl-CoA dehydrogenase 1801542 10363537 Psed_1710 Pseudonocardia dioxanivorans CB1190 3-hydroxyacyl-CoA dehydrogenase YP_004331798.1 1799758 D 675635 CDS YP_004331799.1 331695560 10363538 1801590..1801907 1 NC_015312.1 KEGG: amd:AMED_7733 hypothetical protein; hypothetical protein 1801907 10363538 Psed_1711 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331799.1 1801590 D 675635 CDS YP_004331800.1 331695561 10363539 complement(1802202..1803116) 1 NC_015312.1 TIGRFAM: DivIVA domain; KEGG: rer:RER_38960 hypothetical protein; DivIVA domain-containing protein 1803116 10363539 Psed_1712 Pseudonocardia dioxanivorans CB1190 DivIVA domain-containing protein YP_004331800.1 1802202 R 675635 CDS YP_004331801.1 331695562 10363540 complement(1803520..1804851) 1 NC_015312.1 TIGRFAM: Crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: kfl:Kfla_4989 crotonyl-CoA reductase; SMART: Polyketide synthase, enoylreductase; crotonyl-CoA reductase 1804851 10363540 Psed_1713 Pseudonocardia dioxanivorans CB1190 crotonyl-CoA reductase YP_004331801.1 1803520 R 675635 CDS YP_004331802.1 331695563 10363541 complement(1805150..1805605) 1 NC_015312.1 KEGG: req:REQ_17690 glyoxalase protein; TIGRFAM: Methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase 1805605 10363541 Psed_1714 Pseudonocardia dioxanivorans CB1190 methylmalonyl-CoA epimerase YP_004331802.1 1805150 R 675635 CDS YP_004331803.1 331695564 10363542 1805845..1807035 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: ami:Amir_6104 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 1807035 10363542 Psed_1715 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004331803.1 1805845 D 675635 CDS YP_004331804.1 331695565 10363543 1807085..1808065 1 NC_015312.1 KEGG: nca:Noca_1798 LAO/AO transport system ATPase; TIGRFAM: ArgK protein; PFAM: ArgK protein; LAO/AO transport system ATPase 1808065 10363543 Psed_1716 Pseudonocardia dioxanivorans CB1190 LAO/AO transport system ATPase YP_004331804.1 1807085 D 675635 CDS YP_004331805.1 331695566 10363544 complement(1808094..1809218) 1 NC_015312.1 KEGG: tbi:Tbis_0340 tetratricopeptide domain-containing protein; hypothetical protein 1809218 10363544 Psed_1717 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331805.1 1808094 R 675635 CDS YP_004331806.1 331695567 10363545 complement(1809521..1810069) 1 NC_015312.1 KEGG: sen:SACE_6221 MarR-transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 1810069 10363545 Psed_1718 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004331806.1 1809521 R 675635 CDS YP_004331807.1 331695568 10363546 1810180..1810515 1 NC_015312.1 PFAM: Protein of unknown function DUF77; KEGG: ami:Amir_6081 protein of unknown function DUF77; hypothetical protein 1810515 10363546 Psed_1719 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331807.1 1810180 D 675635 CDS YP_004331808.1 331695569 10363547 complement(1810418..1811602) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit 1811602 10363547 Psed_1720 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004331808.1 1810418 R 675635 CDS YP_004331809.1 331695570 10363548 complement(1811928..1812224) 1 NC_015312.1 hypothetical protein 1812224 10363548 Psed_1721 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331809.1 1811928 R 675635 CDS YP_004331810.1 331695571 10363549 1812532..1813527 1 NC_015312.1 PFAM: Thioredoxin domain; KEGG: sen:SACE_6218 thioredoxin; thioredoxin 1813527 10363549 Psed_1722 Pseudonocardia dioxanivorans CB1190 thioredoxin YP_004331810.1 1812532 D 675635 CDS YP_004331811.1 331695572 10363550 complement(1813598..1814956) 1 NC_015312.1 KEGG: ami:Amir_6076 metalloprotease-like protein; metalloprotease-like protein 1814956 10363550 Psed_1723 Pseudonocardia dioxanivorans CB1190 metalloprotease-like protein YP_004331811.1 1813598 R 675635 CDS YP_004331812.1 331695573 10363551 1815152..1816471 1 NC_015312.1 PFAM: Protein of unknown function DUF2029; KEGG: rxy:Rxyl_2872 hypothetical protein; hypothetical protein 1816471 10363551 Psed_1724 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331812.1 1815152 D 675635 CDS YP_004331813.1 331695574 10363552 complement(1816894..1819392) 1 NC_015312.1 KEGG: ami:Amir_6075 1,4-alpha-glucan branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; TIGRFAM: 1,4-alpha-glucan-branching enzyme; HAMAP: 1,4-alpha-glucan-branching enzyme; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; 1,4-alpha-glucan branching enzyme 1819392 10363552 Psed_1725 Pseudonocardia dioxanivorans CB1190 1,4-alpha-glucan branching enzyme YP_004331813.1 1816894 R 675635 CDS YP_004331814.1 331695575 10363553 complement(1819556..1820509) 1 NC_015312.1 KEGG: cur:cur_1817 Fe-S oxidoreductase; hypothetical protein 1820509 10363553 Psed_1726 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331814.1 1819556 R 675635 CDS YP_004331815.1 331695576 10363554 complement(1820601..1821281) 1 NC_015312.1 KEGG: fra:Francci3_4183 sigma-24; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1821281 10363554 Psed_1727 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004331815.1 1820601 R 675635 CDS YP_004331816.1 331695577 10363555 complement(1821429..1822832) 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: rop:ROP_61010 maltokinase; aminoglycoside phosphotransferase 1822832 10363555 Psed_1728 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004331816.1 1821429 R 675635 CDS YP_004331817.1 331695578 10363556 complement(1822829..1824592) 1 NC_015312.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; KEGG: ami:Amir_6073 trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; trehalose synthase 1824592 10363556 Psed_1729 Pseudonocardia dioxanivorans CB1190 trehalose synthase YP_004331817.1 1822829 R 675635 CDS YP_004331818.1 331695579 10363557 complement(1824850..1826820) 1 NC_015312.1 KEGG: ami:Amir_6072 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; alpha amylase 1826820 10363557 Psed_1730 Pseudonocardia dioxanivorans CB1190 alpha amylase YP_004331818.1 1824850 R 675635 CDS YP_004331819.1 331695580 10363558 1827233..1829788 1 NC_015312.1 TIGRFAM: Alpha-glucan phosphorylase; KEGG: ami:Amir_6071 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; alpha-glucan phosphorylase 1829788 10363558 Psed_1731 Pseudonocardia dioxanivorans CB1190 alpha-glucan phosphorylase YP_004331819.1 1827233 D 675635 CDS YP_004331820.1 331695581 10363559 complement(1829845..1830069) 1 NC_015312.1 TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: sma:SAV_5811 hypothetical protein; SMART: Regulatory protein, FmdB; FmdB family regulatory protein 1830069 10363559 Psed_1732 Pseudonocardia dioxanivorans CB1190 FmdB family regulatory protein YP_004331820.1 1829845 R 675635 CDS YP_004331821.1 331695582 10363560 complement(1830131..1832152) 1 NC_015312.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Glycogen debranching enzyme; KEGG: ami:Amir_6067 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; glycogen debranching protein GlgX 1832152 10363560 Psed_1733 Pseudonocardia dioxanivorans CB1190 glycogen debranching protein GlgX YP_004331821.1 1830131 R 675635 CDS YP_004331822.1 331695583 10363561 1832173..1833030 1 NC_015312.1 KEGG: svi:Svir_28470 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1833030 10363561 Psed_1734 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004331822.1 1832173 D 675635 CDS YP_004331823.1 331695584 10363562 1833068..1833877 1 NC_015312.1 PFAM: Crotonase, core; KEGG: sen:SACE_6207 enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase 1833877 10363562 Psed_1735 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004331823.1 1833068 D 675635 CDS YP_004331824.1 331695585 10363563 1833912..1834868 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: rop:ROP_65070 methyltransferase; type 11 methyltransferase 1834868 10363563 Psed_1736 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331824.1 1833912 D 675635 CDS YP_004331825.1 331695586 10363564 1834913..1836052 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; KEGG: amd:AMED_9311 two-component system histidine kinase; signal transduction histidine kinase 1836052 10363564 Psed_1737 Pseudonocardia dioxanivorans CB1190 signal transduction histidine kinase YP_004331825.1 1834913 D 675635 CDS YP_004331826.1 331695587 10363565 1836049..1836708 1 NC_015312.1 KEGG: svi:Svir_39510 response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1836708 10363565 Psed_1738 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004331826.1 1836049 D 675635 CDS YP_004331827.1 331695588 10363566 1836858..1837478 1 NC_015312.1 KEGG: kfl:Kfla_4709 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1837478 10363566 Psed_1739 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004331827.1 1836858 D 675635 CDS YP_004331828.1 331695589 10363567 complement(1837524..1837727) 1 NC_015312.1 hypothetical protein 1837727 10363567 Psed_1740 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331828.1 1837524 R 675635 CDS YP_004331829.1 331695590 10363568 1837866..1838639 1 NC_015312.1 KEGG: ami:Amir_6061 acetyltransferase (isoleucine patch superfamily)-like protein; acetyltransferase (isoleucine patch superfamily)-like protein 1838639 10363568 Psed_1741 Pseudonocardia dioxanivorans CB1190 acetyltransferase (isoleucine patch superfamily)-like protein YP_004331829.1 1837866 D 675635 CDS YP_004331830.1 331695591 10363569 complement(1838690..1839964) 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; Starch synthase, catalytic domain; KEGG: ami:Amir_6058 glycosyl transferase group 1; group 1 glycosyl transferase 1839964 10363569 Psed_1742 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004331830.1 1838690 R 675635 CDS YP_004331831.1 331695592 10363570 complement(1839978..1840835) 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fre:Franean1_4105 LysR family transcriptional regulator; LysR family transcriptional regulator 1840835 10363570 Psed_1743 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004331831.1 1839978 R 675635 CDS YP_004331832.1 331695593 10363571 1841206..1842576 1 NC_015312.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: fal:FRAAL4799 NtaA/SnaA/SoxA family monooxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 1842576 10363571 Psed_1744 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004331832.1 1841206 D 675635 CDS YP_004331833.1 331695594 10363572 1842607..1844139 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: rop:ROP_14350 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 1844139 10363572 Psed_1745 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004331833.1 1842607 D 675635 CDS YP_004331834.1 331695595 10363573 1844136..1845173 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro01762 ABC peptide transporter, permease component; ABC transporter permease 1845173 10363573 Psed_1746 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331834.1 1844136 D 675635 CDS YP_004331835.1 331695596 10363574 1845173..1846024 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro01761 ABC peptide transporter, permease component; ABC transporter permease 1846024 10363574 Psed_1747 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004331835.1 1845173 D 675635 CDS YP_004331836.1 331695597 10363575 1846005..1846814 1 NC_015312.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: rop:ROP_14320 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; nickel-transporting ATPase 1846814 10363575 Psed_1748 Pseudonocardia dioxanivorans CB1190 nickel-transporting ATPase YP_004331836.1 1846005 D 675635 CDS YP_004331837.1 331695598 10363576 1846807..1847658 1 NC_015312.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fal:FRAAL4794 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; nickel-transporting ATPase 1847658 10363576 Psed_1749 Pseudonocardia dioxanivorans CB1190 nickel-transporting ATPase YP_004331837.1 1846807 D 675635 CDS YP_004331838.1 331695599 10363577 1847655..1848434 1 NC_015312.1 KEGG: fal:FRAAL3869 hypothetical protein; hypothetical protein 1848434 10363577 Psed_1750 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331838.1 1847655 D 675635 CDS YP_004331839.1 331695600 10363578 1848431..1848886 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: tcu:Tcur_1382 cupin 2 conserved barrel domain-containing protein; cupin 1848886 10363578 Psed_1751 Pseudonocardia dioxanivorans CB1190 cupin YP_004331839.1 1848431 D 675635 CDS YP_004331840.1 331695601 10363579 1849068..1849373 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sco:SCO5904 hypothetical protein; antibiotic biosynthesis monooxygenase 1849373 10363579 Psed_1752 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004331840.1 1849068 D 675635 CDS YP_004331841.1 331695602 10363580 1849545..1850324 1 NC_015312.1 KEGG: amd:AMED_1351 hypothetical protein; hypothetical protein 1850324 10363580 Psed_1753 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331841.1 1849545 D 675635 CDS YP_004331842.1 331695603 10363581 complement(1850273..1851847) 1 NC_015312.1 PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; KEGG: ami:Amir_6057 glycoside hydrolase 57; hypothetical protein 1851847 10363581 Psed_1754 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331842.1 1850273 R 675635 CDS YP_004331843.1 331695604 10363582 complement(1851844..1852581) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: ami:Amir_6056 methyltransferase type 11; type 11 methyltransferase 1852581 10363582 Psed_1755 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331843.1 1851844 R 675635 CDS YP_004331844.1 331695605 10363583 1852981..1853826 1 NC_015312.1 KEGG: sus:Acid_4192 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 1853826 10363583 Psed_1756 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004331844.1 1852981 D 675635 CDS YP_004331845.1 331695606 10363584 complement(1853834..1854763) 1 NC_015312.1 PFAM: Allantoicase domain; TIGRFAM: Allantoicase; HAMAP: Allantoicase; KEGG: rop:ROP_44360 allantoicase; allantoicase 1854763 10363584 Psed_1757 Pseudonocardia dioxanivorans CB1190 allantoicase YP_004331845.1 1853834 R 675635 CDS YP_004331846.1 331695607 10363585 complement(1854756..1856081) 1 NC_015312.1 TIGRFAM: Allantoinase; KEGG: cai:Caci_4726 allantoinase; PFAM: Amidohydrolase 1; allantoinase 1856081 10363585 Psed_1758 Pseudonocardia dioxanivorans CB1190 allantoinase YP_004331846.1 1854756 R 675635 CDS YP_004331847.1 331695608 10363586 complement(1856078..1856461) 1 NC_015312.1 PFAM: AIG2-like; KEGG: sna:Snas_2545 hypothetical protein; AIG2 family protein 1856461 10363586 Psed_1759 Pseudonocardia dioxanivorans CB1190 AIG2 family protein YP_004331847.1 1856078 R 675635 CDS YP_004331848.1 331695609 10363587 complement(1856523..1858793) 1 NC_015312.1 KEGG: gob:Gobs_3387 xanthine dehydrogenase subunit D; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase 1858793 10363587 Psed_1760 Pseudonocardia dioxanivorans CB1190 xanthine dehydrogenase YP_004331848.1 1856523 R 675635 CDS YP_004331849.1 331695610 10363588 complement(1858790..1860124) 1 NC_015312.1 KEGG: nml:Namu_0260 hydroxydechloroatrazine ethylaminohydrolase; PFAM: Amidohydrolase 1; S-adenosylhomocysteine deaminase 1860124 10363588 Psed_1761 Pseudonocardia dioxanivorans CB1190 S-adenosylhomocysteine deaminase YP_004331849.1 1858790 R 675635 CDS YP_004331850.1 331695611 10363589 complement(1860121..1860591) 1 NC_015312.1 KEGG: amd:AMED_1920 carbon-monoxide dehydrogenase small subunit; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 1860591 10363589 Psed_1762 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004331850.1 1860121 R 675635 CDS YP_004331851.1 331695612 10363590 complement(1860591..1861463) 1 NC_015312.1 PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: gob:Gobs_3389 molybdopterin dehydrogenase FAD-binding protein; molybdopterin dehydrogenase FAD-binding protein 1861463 10363590 Psed_1763 Pseudonocardia dioxanivorans CB1190 molybdopterin dehydrogenase FAD-binding protein YP_004331851.1 1860591 R 675635 CDS YP_004331852.1 331695613 10363591 1861558..1863072 1 NC_015312.1 PFAM: Purine catabolism PurC-like; KEGG: nml:Namu_1388 PucR family transcriptional regulator; PucR family transcriptional regulator 1863072 10363591 Psed_1764 Pseudonocardia dioxanivorans CB1190 PucR family transcriptional regulator YP_004331852.1 1861558 D 675635 CDS YP_004331853.1 331695614 10363592 complement(1863131..1863499) 1 NC_015312.1 hypothetical protein 1863499 10363592 Psed_1765 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331853.1 1863131 R 675635 CDS YP_004331854.1 331695615 10363593 complement(1863754..1864611) 1 NC_015312.1 TIGRFAM: Uricase; KEGG: msm:MSMEG_1296 uricase; PFAM: Uricase; urate oxidase 1864611 10363593 Psed_1766 Pseudonocardia dioxanivorans CB1190 urate oxidase YP_004331854.1 1863754 R 675635 CDS YP_004331855.1 331695616 10363594 complement(1864617..1864913) 1 NC_015312.1 KEGG: fra:Francci3_0842 transthyretin; TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase; hydroxyisourate hydrolase 1864913 10363594 Psed_1767 Pseudonocardia dioxanivorans CB1190 hydroxyisourate hydrolase YP_004331855.1 1864617 R 675635 CDS YP_004331856.1 331695617 10363595 complement(1864910..1865386) 1 NC_015312.1 KEGG: kra:Krad_2069 hypothetical protein; TIGRFAM: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase 1865386 10363595 Psed_1768 Pseudonocardia dioxanivorans CB1190 OHCU decarboxylase YP_004331856.1 1864910 R 675635 CDS YP_004331857.1 331695618 10363596 complement(1865383..1867242) 1 NC_015312.1 KEGG: nml:Namu_0261 xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1; PFAM: Xanthine/uracil/vitamin C permease; Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; xanthine permease 1867242 10363596 Psed_1769 Pseudonocardia dioxanivorans CB1190 xanthine permease YP_004331857.1 1865383 R 675635 CDS YP_004331858.1 331695619 10363597 complement(1867438..1867728) 1 NC_015312.1 hypothetical protein 1867728 10363597 Psed_1770 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331858.1 1867438 R 675635 CDS YP_004331859.1 331695620 10363598 1868133..1868921 1 NC_015312.1 KEGG: amd:AMED_1653 electron transfer flavoprotein beta subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; electron transfer flavoprotein subunit alpha/beta 1868921 10363598 Psed_1771 Pseudonocardia dioxanivorans CB1190 electron transfer flavoprotein subunit alpha/beta YP_004331859.1 1868133 D 675635 CDS YP_004331860.1 331695621 10363599 1868949..1869896 1 NC_015312.1 KEGG: sen:SACE_6196 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; electron transfer flavoprotein subunit alpha 1869896 10363599 Psed_1772 Pseudonocardia dioxanivorans CB1190 electron transfer flavoprotein subunit alpha YP_004331860.1 1868949 D 675635 CDS YP_004331861.1 331695622 10363600 1870174..1870935 1 NC_015312.1 KEGG: ami:Amir_6049 ornithine-acyl(acyl carrier protein) N-acyltransferase; ornithine-acyl(acyl carrier protein) N-acyltransferase 1870935 10363600 Psed_1773 Pseudonocardia dioxanivorans CB1190 ornithine-acyl(acyl carrier protein) N-acyltransferase YP_004331861.1 1870174 D 675635 CDS YP_004331862.1 331695623 10363601 1871007..1872131 1 NC_015312.1 KEGG: sma:SAV_7311 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1872131 10363601 Psed_1774 Pseudonocardia dioxanivorans CB1190 phospholipid/glycerol acyltransferase YP_004331862.1 1871007 D 675635 CDS YP_004331863.1 331695624 10363602 1872088..1873521 1 NC_015312.1 KEGG: amd:AMED_1660 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase 1873521 10363602 Psed_1775 Pseudonocardia dioxanivorans CB1190 cysteine desulfurase YP_004331863.1 1872088 D 675635 CDS YP_004331864.1 331695625 10363603 1873518..1874597 1 NC_015312.1 TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: nfa:nfa42670 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA-specific 2-thiouridylase; tRNA-specific 2-thiouridylase mnmA 1874597 10363603 Psed_1776 Pseudonocardia dioxanivorans CB1190 tRNA-specific 2-thiouridylase mnmA YP_004331864.1 1873518 D 675635 CDS YP_004331865.1 331695626 10363604 1874669..1875562 1 NC_015312.1 PFAM: Domain of unknown function DUF1206; KEGG: scb:SCAB_8071 integral membrane protein; hypothetical protein 1875562 10363604 Psed_1777 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331865.1 1874669 D 675635 CDS YP_004331866.1 331695627 10363605 complement(1875566..1875859) 1 NC_015312.1 PFAM: Protein of unknown function DUF1330; KEGG: bgf:BC1003_4875 hypothetical protein; hypothetical protein 1875859 10363605 Psed_1778 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331866.1 1875566 R 675635 CDS YP_004331867.1 331695628 10363606 1876165..1877712 1 NC_015312.1 KEGG: eli:ELI_00975 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1877712 10363606 Psed_1779 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004331867.1 1876165 D 675635 CDS YP_004331868.1 331695629 10363607 1877709..1878851 1 NC_015312.1 KEGG: bts:Btus_1990 beta-ketoacyl synthase; PFAM: Thiolase, C-terminal; propanoyl-CoA C-acyltransferase 1878851 10363607 Psed_1780 Pseudonocardia dioxanivorans CB1190 propanoyl-CoA C-acyltransferase YP_004331868.1 1877709 D 675635 CDS YP_004331869.1 331695630 10363608 1878848..1880044 1 NC_015312.1 KEGG: fra:Francci3_2247 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 1880044 10363608 Psed_1781 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004331869.1 1878848 D 675635 CDS YP_004331870.1 331695631 10363609 1880041..1880637 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: swi:Swit_0760 TetR family transcriptional regulator; TetR family transcriptional regulator 1880637 10363609 Psed_1782 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004331870.1 1880041 D 675635 CDS YP_004331871.1 331695632 10363610 1880677..1881942 1 NC_015312.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: svi:Svir_08670 cobalamin-independent methionine synthase; vitamin-B12 independent methionine synthase 1881942 10363610 Psed_1783 Pseudonocardia dioxanivorans CB1190 vitamin-B12 independent methionine synthase YP_004331871.1 1880677 D 675635 CDS YP_004331872.1 331695633 10363611 complement(1882036..1882341) 1 NC_015312.1 hypothetical protein 1882341 10363611 Psed_1784 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331872.1 1882036 R 675635 CDS YP_004331873.1 331695634 10363612 1882400..1883518 1 NC_015312.1 KEGG: hoh:Hoch_1789 serine--pyruvate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase; serine--pyruvate transaminase 1883518 10363612 Psed_1785 Pseudonocardia dioxanivorans CB1190 serine--pyruvate transaminase YP_004331873.1 1882400 D 675635 CDS YP_004331874.1 331695635 10363613 complement(1883526..1884272) 1 NC_015312.1 PFAM: Clp, N-terminal; KEGG: rop:ROP_03750 hypothetical protein; Clp domain-containing protein 1884272 10363613 Psed_1786 Pseudonocardia dioxanivorans CB1190 Clp domain-containing protein YP_004331874.1 1883526 R 675635 CDS YP_004331875.1 331695636 10363614 1884531..1885388 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: cai:Caci_7375 luciferase-like monooxygenase; luciferase-like protein 1885388 10363614 Psed_1787 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331875.1 1884531 D 675635 CDS YP_004331876.1 331695637 10363615 1885375..1887813 1 NC_015312.1 SMART: NAD-dependent DNA ligase, N-terminal; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: amd:AMED_1669 DNA ligase (NAD+); HAMAP: NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; DNA ligase 1887813 10363615 Psed_1788 Pseudonocardia dioxanivorans CB1190 DNA ligase YP_004331876.1 1885375 D 675635 CDS YP_004331877.1 331695638 10363616 1888144..1888863 1 NC_015312.1 PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: mau:Micau_1535 hypothetical protein; hypothetical protein 1888863 10363616 Psed_1789 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331877.1 1888144 D 675635 CDS YP_004331878.1 331695639 10363617 1889017..1890081 1 NC_015312.1 PFAM: Ferredoxin; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; KEGG: stp:Strop_2076 oxidoreductase FAD-binding subunit; ferredoxin 1890081 10363617 Psed_1790 Pseudonocardia dioxanivorans CB1190 ferredoxin YP_004331878.1 1889017 D 675635 CDS YP_004331879.1 331695640 10363618 1890090..1891232 1 NC_015312.1 PFAM: Fatty acid desaturase, type 1; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase); fatty acid desaturase 1891232 10363618 Psed_1791 Pseudonocardia dioxanivorans CB1190 fatty acid desaturase YP_004331879.1 1890090 D 675635 CDS YP_004331880.1 331695641 10363619 complement(1891488..1892648) 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; KEGG: cwo:Cwoe_4185 transcriptional regulator, CdaR; LysR family transcriptional regulator 1892648 10363619 Psed_1792 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004331880.1 1891488 R 675635 CDS YP_004331881.1 331695642 10363620 complement(1892649..1893308) 1 NC_015312.1 PFAM: Amino acid-binding ACT; KEGG: amd:AMED_1671 ACT domain-containing protein; amino acid-binding ACT domain-containing protein 1893308 10363620 Psed_1793 Pseudonocardia dioxanivorans CB1190 amino acid-binding ACT domain-containing protein YP_004331881.1 1892649 R 675635 CDS YP_004331882.1 331695643 10363621 1893625..1893948 1 NC_015312.1 TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Glu-tRNAGln amidotransferase, C subunit; KEGG: sro:Sros_8075 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 1893948 10363621 Psed_1794 Pseudonocardia dioxanivorans CB1190 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_004331882.1 1893625 D 675635 CDS YP_004331883.1 331695644 10363622 1893945..1895450 1 NC_015312.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: sen:SACE_6173 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 1895450 10363622 Psed_1795 Pseudonocardia dioxanivorans CB1190 glutamyl-tRNA(Gln) amidotransferase subunit A YP_004331883.1 1893945 D 675635 CDS YP_004331884.1 331695645 10363623 1895447..1896949 1 NC_015312.1 SMART: Asn/Gln amidotransferase; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: svi:Svir_08750 aspartyl/glutamyl-tRNA amidotransferase subunit B; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Asn/Gln amidotransferase; aspartyl/glutamyl-tRNA amidotransferase subunit B 1896949 10363623 Psed_1796 Pseudonocardia dioxanivorans CB1190 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_004331884.1 1895447 D 675635 CDS YP_004331885.1 331695646 10363624 complement(1897692..1898621) 1 NC_015312.1 KEGG: ami:Amir_2715 luciferase-like monooxygenase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4879, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 1898621 10363624 Psed_1797 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004331885.1 1897692 R 675635 CDS YP_004331886.1 331695647 10363626 complement(1899600..1900451) 1 NC_015312.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: rha:RHA1_ro06693 5-valerolactone hydrolase; SMP-30/Gluconolaconase/LRE-like region-containing protein 1900451 10363626 Psed_1799 Pseudonocardia dioxanivorans CB1190 SMP-30/Gluconolaconase/LRE-like region-containing protein YP_004331886.1 1899600 R 675635 CDS YP_004331887.1 331695648 10363627 complement(1900493..1901995) 1 NC_015312.1 KEGG: sen:SACE_2895 betaine-aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; betaine-aldehyde dehydrogenase 1901995 10363627 Psed_1800 Pseudonocardia dioxanivorans CB1190 betaine-aldehyde dehydrogenase YP_004331887.1 1900493 R 675635 CDS YP_004331888.1 331695649 10363628 complement(1902032..1903183) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: msm:MSMEG_5626 luciferase; luciferase-like protein 1903183 10363628 Psed_1801 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004331888.1 1902032 R 675635 CDS YP_004331889.1 331695650 10363629 1903501..1904502 1 NC_015312.1 manually curated; PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: nda:Ndas_3659 transcriptional regulator, LacI family; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 1904502 10363629 Psed_1802 Pseudonocardia dioxanivorans CB1190 LacI family transcriptional regulator YP_004331889.1 1903501 D 675635 CDS YP_004331890.1 331695651 10363630 complement(1904670..1906178) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_5274 hypothetical protein; major facilitator superfamily protein 1906178 10363630 Psed_1803 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004331890.1 1904670 R 675635 CDS YP_004331891.1 331695652 10363631 1906291..1907334 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 1907334 10363631 Psed_1804 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004331891.1 1906291 D 675635 CDS YP_004331892.1 331695653 10363632 1907353..1908453 1 NC_015312.1 KEGG: pla:Plav_1165 cyclohexanone monooxygenase; phenylacetone monooxygenase 1908453 10363632 Psed_1805 Pseudonocardia dioxanivorans CB1190 phenylacetone monooxygenase YP_004331892.1 1907353 D 675635 CDS YP_004331893.1 331695654 10363633 1908472..1908936 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: axy:AXYL_01704 hypothetical protein; hypothetical protein 1908936 10363633 Psed_1806 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331893.1 1908472 D 675635 CDS YP_004331894.1 331695655 10363634 1908933..1910054 1 NC_015312.1 KEGG: fri:FraEuI1c_2474 hypothetical protein; hypothetical protein 1910054 10363634 Psed_1807 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331894.1 1908933 D 675635 CDS YP_004331895.1 331695656 10363635 1910080..1911066 1 NC_015312.1 KEGG: fre:Franean1_1584 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase 1911066 10363635 Psed_1808 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004331895.1 1910080 D 675635 CDS YP_004331896.1 331695657 10363636 1911063..1912256 1 NC_015312.1 KEGG: rha:RHA1_ro02283 formyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 1912256 10363636 Psed_1809 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004331896.1 1911063 D 675635 CDS YP_004331897.1 331695658 10363637 1912249..1913007 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fre:Franean1_4114 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 1913007 10363637 Psed_1810 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004331897.1 1912249 D 675635 CDS YP_004331898.1 331695659 10363638 1913069..1913392 1 NC_015312.1 KEGG: req:REQ_15570 hypothetical protein; hypothetical protein 1913392 10363638 Psed_1811 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331898.1 1913069 D 675635 CDS YP_004331899.1 331695660 10363639 1913535..1913951 1 NC_015312.1 hypothetical protein 1913951 10363639 Psed_1812 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331899.1 1913535 D 675635 CDS YP_004331900.1 331695661 10363640 complement(1914396..1915544) 1 NC_015312.1 KEGG: sen:SACE_6165 glucose dehydrogenase; glucose dehydrogenase 1915544 10363640 Psed_1813 Pseudonocardia dioxanivorans CB1190 glucose dehydrogenase YP_004331900.1 1914396 R 675635 CDS YP_004331901.1 331695662 10363641 1915629..1916552 1 NC_015312.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ami:Amir_6027 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1916552 10363641 Psed_1814 Pseudonocardia dioxanivorans CB1190 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004331901.1 1915629 D 675635 CDS YP_004331902.1 331695663 10363642 1916606..1917202 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: sen:SACE_6162 hypothetical protein; DoxX family protein 1917202 10363642 Psed_1815 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004331902.1 1916606 D 675635 CDS YP_004331903.1 331695664 10363643 1917199..1918005 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: cwo:Cwoe_5845 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1918005 10363643 Psed_1816 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004331903.1 1917199 D 675635 CDS YP_004331904.1 331695665 10363644 complement(1918060..1918710) 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: rop:ROP_36610 hypothetical protein; bifunctional deaminase-reductase domain-containing protein 1918710 10363644 Psed_1817 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004331904.1 1918060 R 675635 CDS YP_004331905.1 331695666 10363645 complement(1918843..1920684) 1 NC_015312.1 PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: amd:AMED_1683 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 1920684 10363645 Psed_1818 Pseudonocardia dioxanivorans CB1190 dihydroxy-acid dehydratase YP_004331905.1 1918843 R 675635 CDS YP_004331906.1 331695667 10363646 complement(1920690..1921109) 1 NC_015312.1 KEGG: sen:SACE_6160 hypothetical protein; hypothetical protein 1921109 10363646 Psed_1819 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331906.1 1920690 R 675635 CDS YP_004331907.1 331695668 10363647 1921391..1923349 1 NC_015312.1 TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: ami:Amir_6021 acetolactate synthase 1 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase large subunit, biosynthetic type 1923349 10363647 Psed_1820 Pseudonocardia dioxanivorans CB1190 acetolactate synthase large subunit, biosynthetic type YP_004331907.1 1921391 D 675635 CDS YP_004331908.1 331695669 10363648 1923349..1923855 1 NC_015312.1 KEGG: svi:Svir_08880 acetolactate synthase 3 regulatory subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase small subunit 1923855 10363648 Psed_1821 Pseudonocardia dioxanivorans CB1190 acetolactate synthase small subunit YP_004331908.1 1923349 D 675635 CDS YP_004331909.1 331695670 10363649 1923901..1924905 1 NC_015312.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Acetohydroxy acid isomeroreductase; KEGG: amd:AMED_1687 ketol-acid reductoisomerase; ketol-acid reductoisomerase 1924905 10363649 Psed_1822 Pseudonocardia dioxanivorans CB1190 ketol-acid reductoisomerase YP_004331909.1 1923901 D 675635 CDS YP_004331910.1 331695671 10363650 1925036..1926028 1 NC_015312.1 KEGG: req:REQ_33170 fmn-dependent monooxygenase; TIGRFAM: Luciferase oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase oxidoreductase, group 1 1926028 10363650 Psed_1823 Pseudonocardia dioxanivorans CB1190 luciferase oxidoreductase, group 1 YP_004331910.1 1925036 D 675635 CDS YP_004331911.1 331695672 10363651 complement(1926038..1926901) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: ava:Ava_C0006 hypothetical protein; type 11 methyltransferase 1926901 10363651 Psed_1824 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004331911.1 1926038 R 675635 CDS YP_004331912.1 331695673 10363652 1927141..1928742 1 NC_015312.1 TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: sen:SACE_6155 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Amino acid-binding ACT; D-3-phosphoglycerate dehydrogenase 1928742 10363652 Psed_1825 Pseudonocardia dioxanivorans CB1190 D-3-phosphoglycerate dehydrogenase YP_004331912.1 1927141 D 675635 CDS YP_004331913.1 331695674 10363653 1929010..1930050 1 NC_015312.1 HAMAP: 3-isopropylmalate dehydrogenase; KEGG: amd:AMED_1696 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1930050 10363653 Psed_1826 Pseudonocardia dioxanivorans CB1190 3-isopropylmalate dehydrogenase YP_004331913.1 1929010 D 675635 CDS YP_004331914.1 331695675 10363654 complement(1930124..1930438) 1 NC_015312.1 KEGG: bbt:BBta_5960 hypothetical protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 1930438 10363654 Psed_1827 Pseudonocardia dioxanivorans CB1190 ethyl tert-butyl ether degradation EthD YP_004331914.1 1930124 R 675635 CDS YP_004331915.1 331695676 10363655 complement(1930563..1931870) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: tpr:Tpau_1606 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein 1931870 10363655 Psed_1828 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004331915.1 1930563 R 675635 CDS YP_004331916.1 331695677 10363656 1931923..1933416 1 NC_015312.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; manually curated; KEGG: ami:Amir_6009 glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; glutamyl-tRNA synthetase 1933416 10363656 Psed_1829 Pseudonocardia dioxanivorans CB1190 glutamyl-tRNA synthetase YP_004331916.1 1931923 D 675635 CDS YP_004331917.1 331695678 10363659 complement(1933858..1935615) 1 NC_015312.1 PFAM: Heat shock protein 70; KEGG: amd:AMED_5168 chaperone protein DnaK-like protein; molecular chaperone DnaK 1935615 10363659 Psed_1830 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaK YP_004331917.1 1933858 R 675635 CDS YP_004331918.1 331695679 10363660 complement(1935764..1936465) 1 NC_015312.1 KEGG: ami:Amir_6007 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 1936465 10363660 Psed_1831 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004331918.1 1935764 R 675635 CDS YP_004331919.1 331695680 10363661 1936548..1937966 1 NC_015312.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit; KEGG: ami:Amir_6006 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; 3-isopropylmalate dehydratase large subunit 1937966 10363661 Psed_1832 Pseudonocardia dioxanivorans CB1190 3-isopropylmalate dehydratase large subunit YP_004331919.1 1936548 D 675635 CDS YP_004331920.1 331695681 10363662 1938038..1938634 1 NC_015312.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; HAMAP: 3-isopropylmalate dehydratase, small subunit; KEGG: amd:AMED_1724 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit 1938634 10363662 Psed_1833 Pseudonocardia dioxanivorans CB1190 3-isopropylmalate dehydratase small subunit YP_004331920.1 1938038 D 675635 CDS YP_004331921.1 331695682 10363663 1938771..1939328 1 NC_015312.1 KEGG: mul:MUL_1970 DNA-binding protein HU HupB-like protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 1939328 10363663 Psed_1834 Pseudonocardia dioxanivorans CB1190 histone family protein DNA-binding protein YP_004331921.1 1938771 D 675635 CDS YP_004331922.1 331695683 10363664 complement(1939382..1940320) 1 NC_015312.1 KEGG: amd:AMED_1727 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; NUDIX hydrolase 1940320 10363664 Psed_1835 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004331922.1 1939382 R 675635 CDS YP_004331923.1 331695684 10363665 complement(1940328..1942853) 1 NC_015312.1 PFAM: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; HAMAP: Polyphosphate kinase; KEGG: amd:AMED_1728 polyphosphate kinase; polyphosphate kinase 1942853 10363665 Psed_1836 Pseudonocardia dioxanivorans CB1190 polyphosphate kinase YP_004331923.1 1940328 R 675635 CDS YP_004331924.1 331695685 10363666 complement(1942943..1943710) 1 NC_015312.1 TIGRFAM: 2-phospho-L-lactate guanylyltransferase, CofC; KEGG: amd:AMED_1729 hypothetical protein; 2-phospho-L-lactate guanylyltransferase CofC 1943710 10363666 Psed_1837 Pseudonocardia dioxanivorans CB1190 2-phospho-L-lactate guanylyltransferase CofC YP_004331924.1 1942943 R 675635 CDS YP_004331925.1 331695686 10363667 1943779..1944507 1 NC_015312.1 KEGG: ami:Amir_5999 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1944507 10363667 Psed_1838 Pseudonocardia dioxanivorans CB1190 phospholipid/glycerol acyltransferase YP_004331925.1 1943779 D 675635 CDS YP_004331926.1 331695687 10363668 1944581..1945591 1 NC_015312.1 KEGG: ami:Amir_5998 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); HAMAP: Glycerol-3-phosphate dehydrogenase, NAD-dependent; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; glycerol-3-phosphate dehydrogenase 1945591 10363668 Psed_1839 Pseudonocardia dioxanivorans CB1190 glycerol-3-phosphate dehydrogenase YP_004331926.1 1944581 D 675635 CDS YP_004331927.1 331695688 10363669 1945588..1946688 1 NC_015312.1 KEGG: ami:Amir_5997 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; cystathionine gamma-lyase 1946688 10363669 Psed_1840 Pseudonocardia dioxanivorans CB1190 cystathionine gamma-lyase YP_004331927.1 1945588 D 675635 CDS YP_004331928.1 331695689 10363670 complement(1946736..1946948) 1 NC_015312.1 hypothetical protein 1946948 10363670 Psed_1841 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331928.1 1946736 R 675635 CDS YP_004331929.1 331695690 10363671 1947159..1947749 1 NC_015312.1 KEGG: nml:Namu_1825 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 1947749 10363671 Psed_1842 Pseudonocardia dioxanivorans CB1190 HNH endonuclease YP_004331929.1 1947159 D 675635 CDS YP_004331930.1 331695691 10363672 1947877..1949259 1 NC_015312.1 PFAM: Protein of unknown function DUF2252; KEGG: rop:ROP_05540 hypothetical protein; hypothetical protein 1949259 10363672 Psed_1843 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331930.1 1947877 D 675635 CDS YP_004331931.1 331695692 10363673 1949851..1951368 1 NC_015312.1 TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: sen:SACE_3176 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1951368 10363673 Psed_1844 Pseudonocardia dioxanivorans CB1190 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004331931.1 1949851 D 675635 CDS YP_004331932.1 331695693 10363674 1951379..1952725 1 NC_015312.1 KEGG: rop:ROP_57920 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; glutamate-1-semialdehyde 2,1-aminomutase 1952725 10363674 Psed_1845 Pseudonocardia dioxanivorans CB1190 glutamate-1-semialdehyde 2,1-aminomutase YP_004331932.1 1951379 D 675635 CDS YP_004331933.1 331695694 10363675 1952901..1954556 1 NC_015312.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: amd:AMED_0549 exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1954556 10363675 Psed_1846 Pseudonocardia dioxanivorans CB1190 lipopolysaccharide biosynthesis protein YP_004331933.1 1952901 D 675635 CDS YP_004331934.1 331695695 10363676 1954553..1957186 1 NC_015312.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: amd:AMED_0550 exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1957186 10363676 Psed_1847 Pseudonocardia dioxanivorans CB1190 lipopolysaccharide biosynthesis protein YP_004331934.1 1954553 D 675635 CDS YP_004331935.1 331695696 10363677 1957189..1958514 1 NC_015312.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: sro:Sros_0655 GDP-mannose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 1958514 10363677 Psed_1848 Pseudonocardia dioxanivorans CB1190 nucleotide sugar dehydrogenase YP_004331935.1 1957189 D 675635 CDS YP_004331936.1 331695697 10363678 1958529..1961678 1 NC_015312.1 TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: sco:SCO0386 asparagine synthetase; PFAM: Asparagine synthase; Glycosyl transferase, group 1; Glutamine amidotransferase, class-II; asparagine synthase 1961678 10363678 Psed_1849 Pseudonocardia dioxanivorans CB1190 asparagine synthase YP_004331936.1 1958529 D 675635 CDS YP_004331937.1 331695698 10363679 1961675..1963882 1 NC_015312.1 PFAM: Oxidoreductase, N-terminal; Alcohol dehydrogenase, C-terminal; Oxidoreductase, C-terminal; KEGG: amd:AMED_0552 oxidoreductase; oxidoreductase domain-containing protein 1963882 10363679 Psed_1850 Pseudonocardia dioxanivorans CB1190 oxidoreductase domain-containing protein YP_004331937.1 1961675 D 675635 CDS YP_004331938.1 331695699 10363680 1963879..1965867 1 NC_015312.1 PFAM: Heparinase II/III-like; KEGG: sco:SCO0388 hypothetical protein; heparinase II/III family protein 1965867 10363680 Psed_1851 Pseudonocardia dioxanivorans CB1190 heparinase II/III family protein YP_004331938.1 1963879 D 675635 CDS YP_004331939.1 331695700 10363681 1965864..1967420 1 NC_015312.1 KEGG: amd:AMED_0554 lipoprotein; lipoprotein 1967420 10363681 Psed_1852 Pseudonocardia dioxanivorans CB1190 lipoprotein YP_004331939.1 1965864 D 675635 CDS YP_004331940.1 331695701 10363682 1967422..1968684 1 NC_015312.1 KEGG: amd:AMED_0555 hypothetical protein; hypothetical protein 1968684 10363682 Psed_1853 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331940.1 1967422 D 675635 CDS YP_004331941.1 331695702 10363683 1968681..1969919 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: sco:SCO0391 transferase; group 1 glycosyl transferase 1969919 10363683 Psed_1854 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004331941.1 1968681 D 675635 CDS YP_004331942.1 331695703 10363684 complement(1969948..1970523) 1 NC_015312.1 KEGG: chl:Chy400_1601 transferase hexapeptide repeat containing protein; hypothetical protein 1970523 10363684 Psed_1855 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331942.1 1969948 R 675635 CDS YP_004331943.1 331695704 10363685 complement(1970520..1971800) 1 NC_015312.1 PFAM: Polysaccharide pyruvyl transferase; KEGG: amd:AMED_0562 hypothetical protein; polysaccharide pyruvyl transferase 1971800 10363685 Psed_1856 Pseudonocardia dioxanivorans CB1190 polysaccharide pyruvyl transferase YP_004331943.1 1970520 R 675635 CDS YP_004331944.1 331695705 10363686 complement(1971797..1972753) 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: amd:AMED_0563 glycosyltransferase; family 2 glycosyl transferase 1972753 10363686 Psed_1857 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004331944.1 1971797 R 675635 CDS YP_004331945.1 331695706 10363687 complement(1972750..1974336) 1 NC_015312.1 PFAM: Polysaccharide biosynthesis protein; KEGG: sco:SCO0397 integral membrane protein; polysaccharide biosynthesis protein 1974336 10363687 Psed_1858 Pseudonocardia dioxanivorans CB1190 polysaccharide biosynthesis protein YP_004331945.1 1972750 R 675635 CDS YP_004331946.1 331695707 10363688 complement(1974504..1975274) 1 NC_015312.1 PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: amd:AMED_0557 integral membrane protein; phosphoesterase PA-phosphatase-like protein 1975274 10363688 Psed_1859 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004331946.1 1974504 R 675635 CDS YP_004331947.1 331695708 10363689 complement(1975342..1976169) 1 NC_015312.1 KEGG: sco:SCO0393 transferase; Glucose-1-phosphate cytidylyltransferase 1976169 10363689 Psed_1860 Pseudonocardia dioxanivorans CB1190 Glucose-1-phosphate cytidylyltransferase YP_004331947.1 1975342 R 675635 CDS YP_004331948.1 331695709 10363690 1976445..1976684 1 NC_015312.1 KEGG: svi:Svir_11850 hypothetical protein; hypothetical protein 1976684 10363690 Psed_1861 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331948.1 1976445 D 675635 CDS YP_004331949.1 331695710 10363691 1976671..1977204 1 NC_015312.1 PFAM: Protein of unknown function DUF477; KEGG: svi:Svir_11860 protein of unknown function (DUF477); hypothetical protein 1977204 10363691 Psed_1862 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331949.1 1976671 D 675635 CDS YP_004331950.1 331695711 10363692 1977308..1978879 1 NC_015312.1 KEGG: tfu:Tfu_2960 ATP-binding region, ATPase-like; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 1978879 10363692 Psed_1863 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004331950.1 1977308 D 675635 CDS YP_004331951.1 331695712 10363693 complement(1979353..1980237) 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 1980237 10363693 Psed_1864 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004331951.1 1979353 R 675635 CDS YP_004331952.1 331695713 10363694 complement(1980315..1982696) 1 NC_015312.1 TIGRFAM: Parallel beta-helix repeat-2; KEGG: dre:100006405 hypothetical LOC100006405; parallel beta-helix repeat-containing protein 1982696 10363694 Psed_1865 Pseudonocardia dioxanivorans CB1190 parallel beta-helix repeat-containing protein YP_004331952.1 1980315 R 675635 CDS YP_004331953.1 331695714 10363695 complement(1982923..1984155) 1 NC_015312.1 PFAM: ATP-grasp fold, DUF201-type; KEGG: hje:HacjB3_10435 ATP-grasp protein-like protein; ATP-grasp fold domain-containing protein 1984155 10363695 Psed_1866 Pseudonocardia dioxanivorans CB1190 ATP-grasp fold domain-containing protein YP_004331953.1 1982923 R 675635 CDS YP_004331954.1 331695715 10363696 complement(1984281..1984973) 1 NC_015312.1 KEGG: amd:AMED_6941 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 1984973 10363696 Psed_1867 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004331954.1 1984281 R 675635 CDS YP_004331955.1 331695716 10363697 complement(1985094..1986449) 1 NC_015312.1 KEGG: amd:AMED_6942 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 1986449 10363697 Psed_1868 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004331955.1 1985094 R 675635 CDS YP_004331956.1 331695717 10363698 1986569..1987630 1 NC_015312.1 KEGG: tbi:Tbis_1928 polysaccharide biosynthesis protein CelD; polysaccharide biosynthesis protein CelD 1987630 10363698 Psed_1869 Pseudonocardia dioxanivorans CB1190 polysaccharide biosynthesis protein CelD YP_004331956.1 1986569 D 675635 CDS YP_004331957.1 331695718 10363699 complement(1987767..1988753) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: plm:Plim_0677 polysaccharide deacetylase; polysaccharide deacetylase 1988753 10363699 Psed_1870 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004331957.1 1987767 R 675635 CDS YP_004331958.1 331695719 10363700 complement(1988835..1989602) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: sen:SACE_3921 polysaccharide deacetylase; polysaccharide deacetylase 1989602 10363700 Psed_1871 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004331958.1 1988835 R 675635 CDS YP_004331959.1 331695720 10363701 complement(1989646..1990821) 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: msp:Mspyr1_46690 glycosyltransferase; group 1 glycosyl transferase 1990821 10363701 Psed_1872 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004331959.1 1989646 R 675635 CDS YP_004331960.1 331695721 10363702 1991059..1992321 1 NC_015312.1 KEGG: ppd:Ppro_2168 ATP-grasp enzyme-like protein; ATP-grasp enzyme-like protein 1992321 10363702 Psed_1873 Pseudonocardia dioxanivorans CB1190 ATP-grasp enzyme-like protein YP_004331960.1 1991059 D 675635 CDS YP_004331961.1 331695722 10363703 complement(1992377..1993525) 1 NC_015312.1 KEGG: ote:Oter_0060 hypothetical protein; hypothetical protein 1993525 10363703 Psed_1874 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331961.1 1992377 R 675635 CDS YP_004331962.1 331695723 10363704 complement(1994012..1995019) 1 NC_015312.1 KEGG: chl:Chy400_1771 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 1995019 10363704 Psed_1875 Pseudonocardia dioxanivorans CB1190 dTDP-glucose 4,6-dehydratase YP_004331962.1 1994012 R 675635 CDS YP_004331963.1 331695724 10363705 complement(1995051..1997075) 1 NC_015312.1 PFAM: O-antigen ligase-related; KEGG: msp:Mspyr1_46700 lipid A core-O-antigen ligase-like enyme; O-antigen polymerase 1997075 10363705 Psed_1876 Pseudonocardia dioxanivorans CB1190 O-antigen polymerase YP_004331963.1 1995051 R 675635 CDS YP_004331964.1 331695725 10363706 complement(1997150..1998106) 1 NC_015312.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: msp:Mspyr1_46710 hypothetical protein; lipopolysaccharide biosynthesis protein 1998106 10363706 Psed_1877 Pseudonocardia dioxanivorans CB1190 lipopolysaccharide biosynthesis protein YP_004331964.1 1997150 R 675635 CDS YP_004331965.1 331695726 10363707 complement(1998116..1999327) 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: nml:Namu_3529 group 1 glycosyl transferase; group 1 glycosyl transferase 1999327 10363707 Psed_1878 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004331965.1 1998116 R 675635 CDS YP_004331966.1 331695727 10363708 complement(1999320..2000849) 1 NC_015312.1 TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: gob:Gobs_0418 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 2000849 10363708 Psed_1879 Pseudonocardia dioxanivorans CB1190 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004331966.1 1999320 R 675635 CDS YP_004331967.1 331695728 10363709 2001322..2002365 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: nml:Namu_3183 family 2 glycosyl transferase; family 2 glycosyl transferase 2002365 10363709 Psed_1880 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004331967.1 2001322 D 675635 CDS YP_004331968.1 331695729 10363710 2002593..2003732 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: nml:Namu_3530 group 1 glycosyl transferase; group 1 glycosyl transferase 2003732 10363710 Psed_1881 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004331968.1 2002593 D 675635 CDS YP_004331969.1 331695730 10363711 2003897..2008030 1 NC_015312.1 PFAM: Polysaccharide biosynthesis protein; KEGG: rop:ROP_57940 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2008030 10363711 Psed_1882 Pseudonocardia dioxanivorans CB1190 polysaccharide biosynthesis protein YP_004331969.1 2003897 D 675635 CDS YP_004331970.1 331695731 10363712 complement(2008859..2009671) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: mrd:Mrad2831_4617 polysaccharide deacetylase; polysaccharide deacetylase 2009671 10363712 Psed_1883 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004331970.1 2008859 R 675635 CDS YP_004331971.1 331695732 10363713 complement(2009704..2010804) 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: cai:Caci_8495 glycosyl transferase 2; family 2 glycosyl transferase 2010804 10363713 Psed_1884 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004331971.1 2009704 R 675635 CDS YP_004331972.1 331695733 10363714 complement(2010801..2011370) 1 NC_015312.1 KEGG: ami:Amir_1738 N-acetylglucosamine-1-phosphateuridyltransferase-like protein; N-acetylglucosamine-1-phosphate uridyltransferase 2011370 10363714 Psed_1885 Pseudonocardia dioxanivorans CB1190 N-acetylglucosamine-1-phosphate uridyltransferase YP_004331972.1 2010801 R 675635 CDS YP_004331973.1 331695734 10363715 complement(2011639..2012748) 1 NC_015312.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ami:Amir_1737 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2012748 10363715 Psed_1886 Pseudonocardia dioxanivorans CB1190 DegT/DnrJ/EryC1/StrS aminotransferase YP_004331973.1 2011639 R 675635 CDS YP_004331974.1 331695735 10363716 complement(2012745..2013905) 1 NC_015312.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cai:Caci_8499 glutamine--scyllo-inositol transaminase; DegT/DnrJ/EryC1/StrS aminotransferase 2013905 10363716 Psed_1887 Pseudonocardia dioxanivorans CB1190 DegT/DnrJ/EryC1/StrS aminotransferase YP_004331974.1 2012745 R 675635 CDS YP_004331975.1 331695736 10363717 complement(2013902..2015020) 1 NC_015312.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: ami:Amir_1731 oxidoreductase domain protein; oxidoreductase domain-containing protein 2015020 10363717 Psed_1888 Pseudonocardia dioxanivorans CB1190 oxidoreductase domain-containing protein YP_004331975.1 2013902 R 675635 CDS YP_004331976.1 331695737 10363718 complement(2015197..2016156) 1 NC_015312.1 KEGG: cwo:Cwoe_5315 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 2016156 10363718 Psed_1889 Pseudonocardia dioxanivorans CB1190 UDP-glucose 4-epimerase YP_004331976.1 2015197 R 675635 CDS YP_004331977.1 331695738 10363719 complement(2016168..2016860) 1 NC_015312.1 PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: scb:SCAB_23551 integral membrane protein; phosphoesterase PA-phosphatase-like protein 2016860 10363719 Psed_1890 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004331977.1 2016168 R 675635 CDS YP_004331978.1 331695739 10363720 complement(2016875..2019466) 1 NC_015312.1 TIGRFAM: Peptidase M1, aminopeptidase N actinomycete-type; KEGG: ami:Amir_1142 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; aminopeptidase 2019466 10363720 Psed_1891 Pseudonocardia dioxanivorans CB1190 aminopeptidase YP_004331978.1 2016875 R 675635 CDS YP_004331979.1 331695740 10363721 complement(2019552..2020649) 1 NC_015312.1 PFAM: C-methyltransferase; Methyltransferase hyptothetical; KEGG: gob:Gobs_0365 C-methyltransferase; C-methyltransferase 2020649 10363721 Psed_1892 Pseudonocardia dioxanivorans CB1190 C-methyltransferase YP_004331979.1 2019552 R 675635 CDS YP_004331980.1 331695741 10363722 2020702..2021244 1 NC_015312.1 KEGG: sro:Sros_0651 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; dTDP-4-dehydrorhamnose 3,5-epimerase 2021244 10363722 Psed_1893 Pseudonocardia dioxanivorans CB1190 dTDP-4-dehydrorhamnose 3,5-epimerase YP_004331980.1 2020702 D 675635 CDS YP_004331981.1 331695742 10363723 complement(2021255..2022280) 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sro:Sros_0638 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 2022280 10363723 Psed_1894 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004331981.1 2021255 R 675635 CDS YP_004331982.1 331695743 10363724 complement(2022302..2022967) 1 NC_015312.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: amd:AMED_0567 LmbE family protein; LmbE family protein 2022967 10363724 Psed_1895 Pseudonocardia dioxanivorans CB1190 LmbE family protein YP_004331982.1 2022302 R 675635 CDS YP_004331983.1 331695744 10363725 complement(2022967..2024262) 1 NC_015312.1 PFAM: C-methyltransferase; Methyltransferase hyptothetical; Methyltransferase type 12; KEGG: sro:Sros_0635 methyltransferase; C-methyltransferase 2024262 10363725 Psed_1896 Pseudonocardia dioxanivorans CB1190 C-methyltransferase YP_004331983.1 2022967 R 675635 CDS YP_004331984.1 331695745 10363726 2024477..2025103 1 NC_015312.1 KEGG: sen:SACE_1340 DsbA oxidoreductase; DsbA oxidoreductase 2025103 10363726 Psed_1897 Pseudonocardia dioxanivorans CB1190 DsbA oxidoreductase YP_004331984.1 2024477 D 675635 CDS YP_004331985.1 331695746 10363727 complement(2025199..2025633) 1 NC_015312.1 KEGG: sno:Snov_2020 signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein 2025633 10363727 Psed_1898 Pseudonocardia dioxanivorans CB1190 signal transduction protein YP_004331985.1 2025199 R 675635 CDS YP_004331986.1 331695747 10363728 2025875..2027299 1 NC_015312.1 PFAM: Aldehyde dehydrogenase domain; KEGG: sen:SACE_1341 aldehyde dehydrogenase; aldehyde dehydrogenase 2027299 10363728 Psed_1899 Pseudonocardia dioxanivorans CB1190 aldehyde dehydrogenase YP_004331986.1 2025875 D 675635 CDS YP_004331987.1 331695748 10363729 2027450..2028988 1 NC_015312.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: nfa:nfa31920 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 2028988 10363729 Psed_1900 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004331987.1 2027450 D 675635 CDS YP_004331988.1 331695749 10363730 complement(2029012..2030943) 1 NC_015312.1 KEGG: fal:FRAAL4487 acylaminoacyl-peptidase; acylaminoacyl-peptidase 2030943 10363730 Psed_1901 Pseudonocardia dioxanivorans CB1190 acylaminoacyl-peptidase YP_004331988.1 2029012 R 675635 CDS YP_004331989.1 331695750 10363731 complement(2030944..2032725) 1 NC_015312.1 KEGG: sro:Sros_3531 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: Asparagine synthase amidotransferase; Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase 2032725 10363731 Psed_1902 Pseudonocardia dioxanivorans CB1190 asparagine synthase YP_004331989.1 2030944 R 675635 CDS YP_004331990.1 331695751 10363732 complement(2032764..2035325) 1 NC_015312.1 TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase, predicted; KEGG: fre:Franean1_2292 hypothetical protein; PFAM: Domain of unknown function DUF404; Glutamate--cysteine ligase, GCS2; Domain of unknown function DUF407; carboxylate-amine ligase ybdK 2035325 10363732 Psed_1903 Pseudonocardia dioxanivorans CB1190 carboxylate-amine ligase ybdK YP_004331990.1 2032764 R 675635 CDS YP_004331991.1 331695752 10363733 complement(2035471..2036061) 1 NC_015312.1 TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; KEGG: sti:Sthe_3243 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase-like hydrolase; haloacid dehalogenase 2036061 10363733 Psed_1904 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004331991.1 2035471 R 675635 CDS YP_004331992.1 331695753 10363735 complement(2036717..2037490) 1 NC_015312.1 KEGG: sen:SACE_1347 metallo-beta-lactamase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 2037490 10363735 Psed_1906 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004331992.1 2036717 R 675635 CDS YP_004331993.1 331695754 10363736 complement(2038244..2039965) 1 NC_015312.1 KEGG: mgi:Mflv_1504 hypothetical protein; hypothetical protein 2039965 10363736 Psed_1907 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331993.1 2038244 R 675635 CDS YP_004331994.1 331695755 10363737 2040321..2040863 1 NC_015312.1 KEGG: rer:RER_47870 hypothetical protein; hypothetical protein 2040863 10363737 Psed_1908 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331994.1 2040321 D 675635 CDS YP_004331995.1 331695756 10363738 complement(2040985..2041653) 1 NC_015312.1 KEGG: gob:Gobs_1550 hypothetical protein; hypothetical protein 2041653 10363738 Psed_1909 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331995.1 2040985 R 675635 CDS YP_004331996.1 331695757 10363739 2041670..2042143 1 NC_015312.1 TIGRFAM: Ribose 5-phosphate isomerase, actinobacteria; Ribose/galactose isomerase; KEGG: gbr:Gbro_2041 ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; ribose 5-phosphate isomerase 2042143 10363739 Psed_1910 Pseudonocardia dioxanivorans CB1190 ribose 5-phosphate isomerase YP_004331996.1 2041670 D 675635 CDS YP_004331997.1 331695758 10363740 2042147..2042983 1 NC_015312.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase, catalytic domain; KEGG: sen:SACE_1351 formamidopyrimidine-DNA glycosylase; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-(apurinic or apyrimidinic site) lyase 2042983 10363740 Psed_1911 Pseudonocardia dioxanivorans CB1190 DNA-(apurinic or apyrimidinic site) lyase YP_004331997.1 2042147 D 675635 CDS YP_004331998.1 331695759 10363741 complement(2043128..2043901) 1 NC_015312.1 KEGG: ami:Amir_1148 hypothetical protein; hypothetical protein 2043901 10363741 Psed_1912 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331998.1 2043128 R 675635 CDS YP_004331999.1 331695760 10363742 complement(2044268..2045257) 1 NC_015312.1 KEGG: mrd:Mrad2831_6081 hypothetical protein; hypothetical protein 2045257 10363742 Psed_1913 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004331999.1 2044268 R 675635 CDS YP_004332000.1 331695761 10363743 2045381..2045566 1 NC_015312.1 hypothetical protein 2045566 10363743 Psed_1914 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332000.1 2045381 D 675635 CDS YP_004332001.1 331695762 10363744 2045763..2046626 1 NC_015312.1 KEGG: svi:Svir_26660 hypothetical protein; hypothetical protein 2046626 10363744 Psed_1915 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332001.1 2045763 D 675635 CDS YP_004332002.1 331695763 10363745 2046629..2048395 1 NC_015312.1 KEGG: tcu:Tcur_1929 carnitine O-acetyltransferase; PFAM: Acyltransferase ChoActase/COT/CPT; carnitine O-acetyltransferase 2048395 10363745 Psed_1916 Pseudonocardia dioxanivorans CB1190 carnitine O-acetyltransferase YP_004332002.1 2046629 D 675635 CDS YP_004332003.1 331695764 10363746 2048388..2049272 1 NC_015312.1 KEGG: sma:SAV_542 hypothetical protein; hypothetical protein 2049272 10363746 Psed_1917 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332003.1 2048388 D 675635 CDS YP_004332004.1 331695765 10363747 complement(2049234..2050169) 1 NC_015312.1 KEGG: kfl:Kfla_1162 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-G type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2050169 10363747 Psed_1918 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004332004.1 2049234 R 675635 CDS YP_004332005.1 331695766 10363748 complement(2050209..2050943) 1 NC_015312.1 PFAM: Protein of unknown function DUF899, thioredoxin-like; KEGG: cwo:Cwoe_4051 protein of unknown function DUF899 thioredoxin family protein; hypothetical protein 2050943 10363748 Psed_1919 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332005.1 2050209 R 675635 CDS YP_004332006.1 331695767 10363749 2051144..2051968 1 NC_015312.1 PFAM: Class II aldolase/adducin, N-terminal; KEGG: sus:Acid_5617 hypothetical protein; class II aldolase/adducin family protein 2051968 10363749 Psed_1920 Pseudonocardia dioxanivorans CB1190 class II aldolase/adducin family protein YP_004332006.1 2051144 D 675635 CDS YP_004332007.1 331695768 10363750 complement(2051965..2052735) 1 NC_015312.1 KEGG: sen:SACE_3972 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 2052735 10363750 Psed_1921 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004332007.1 2051965 R 675635 CDS YP_004332008.1 331695769 10363751 2052789..2053958 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mab:MAB_1338 membrane efflux protein; major facilitator superfamily protein 2053958 10363751 Psed_1922 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332008.1 2052789 D 675635 CDS YP_004332009.1 331695770 10363752 complement(2053969..2055009) 1 NC_015312.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: apv:Apar_0653 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 2055009 10363752 Psed_1923 Pseudonocardia dioxanivorans CB1190 tryptophanyl-tRNA synthetase YP_004332009.1 2053969 R 675635 CDS YP_004332010.1 331695771 10363754 complement(2055898..2056833) 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; KEGG: fri:FraEuI1c_3185 transcriptional regulator, LysR family; LysR family transcriptional regulator 2056833 10363754 Psed_1925 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004332010.1 2055898 R 675635 CDS YP_004332011.1 331695772 10363756 complement(2058794..2059150) 1 NC_015312.1 KEGG: nda:Ndas_2113 hypothetical protein; hypothetical protein 2059150 10363756 Psed_1927 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332011.1 2058794 R 675635 CDS YP_004332012.1 331695773 10363758 2059396..2059845 1 NC_015312.1 hypothetical protein 2059845 10363758 Psed_1928 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332012.1 2059396 D 675635 CDS YP_004332013.1 331695774 10363759 2059895..2060680 1 NC_015312.1 KEGG: afo:Afer_1999 hypothetical protein; hypothetical protein 2060680 10363759 Psed_1929 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332013.1 2059895 D 675635 CDS YP_004332014.1 331695775 10363761 2061077..2061655 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: mau:Micau_1997 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 2061655 10363761 Psed_1930 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004332014.1 2061077 D 675635 CDS YP_004332015.1 331695776 10363762 complement(2061670..2062434) 1 NC_015312.1 SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: sna:Snas_2706 transcriptional regulator, AraC family; AraC family transcriptional regulator 2062434 10363762 Psed_1931 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004332015.1 2061670 R 675635 CDS YP_004332016.1 331695777 10363763 complement(2062431..2063021) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: req:REQ_47330 TetR family transcriptional regulator; TetR family transcriptional regulator 2063021 10363763 Psed_1932 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332016.1 2062431 R 675635 CDS YP_004332017.1 331695778 10363764 complement(2063052..2063732) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: rer:RER_51400 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 2063732 10363764 Psed_1933 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004332017.1 2063052 R 675635 CDS YP_004332018.1 331695779 10363765 complement(2063729..2064856) 1 NC_015312.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mau:Micau_3733 hypothetical protein; hypothetical protein 2064856 10363765 Psed_1934 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332018.1 2063729 R 675635 CDS YP_004332019.1 331695780 10363766 2065078..2065434 1 NC_015312.1 KEGG: kfl:Kfla_1240 hypothetical protein; hypothetical protein 2065434 10363766 Psed_1935 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332019.1 2065078 D 675635 CDS YP_004332020.1 331695781 10363767 complement(2065441..2066364) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sco:SCO7666 zinc-binding oxidoreductase (fragment); SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 2066364 10363767 Psed_1936 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004332020.1 2065441 R 675635 CDS YP_004332021.1 331695782 10363768 complement(2066394..2067032) 1 NC_015312.1 TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: rha:RHA1_ro07109 cyanamide hydratase; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 2067032 10363768 Psed_1937 Pseudonocardia dioxanivorans CB1190 metal dependent phosphohydrolase YP_004332021.1 2066394 R 675635 CDS YP_004332022.1 331695783 10363769 2067229..2068206 1 NC_015312.1 KEGG: rha:RHA1_ro07108 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; SMART: Helix-turn-helix, AraC type, DNA binding domain; ThiJ/PfpI domain-containing protein 2068206 10363769 Psed_1938 Pseudonocardia dioxanivorans CB1190 ThiJ/PfpI domain-containing protein YP_004332022.1 2067229 D 675635 CDS YP_004332023.1 331695784 10363770 complement(2068233..2068949) 1 NC_015312.1 KEGG: axy:AXYL_00827 hypothetical protein; hypothetical protein 2068949 10363770 Psed_1939 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332023.1 2068233 R 675635 CDS YP_004332024.1 331695785 10363771 2069125..2070255 1 NC_015312.1 PFAM: Protein of unknown function DUF2183; KEGG: tra:Trad_1218 hypothetical protein; hypothetical protein 2070255 10363771 Psed_1940 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332024.1 2069125 D 675635 CDS YP_004332025.1 331695786 10363772 2070387..2070944 1 NC_015312.1 KEGG: azc:AZC_0152 hypothetical protein; hypothetical protein 2070944 10363772 Psed_1941 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332025.1 2070387 D 675635 CDS YP_004332026.1 331695787 10363773 complement(2070967..2071527) 1 NC_015312.1 HAMAP: Peptidase A8, signal peptidase II; KEGG: rer:pREL1_0145 signal peptidase II; lipoprotein signal peptidase 2071527 10363773 Psed_1942 Pseudonocardia dioxanivorans CB1190 lipoprotein signal peptidase YP_004332026.1 2070967 R 675635 CDS YP_004332027.1 331695788 10363774 complement(2071535..2072791) 1 NC_015312.1 KEGG: cyn:Cyan7425_0057 glycosyl transferase 28; PFAM: Glycosyl transferase, family 28; Sterol 3-beta-glucosyltransferase 2072791 10363774 Psed_1943 Pseudonocardia dioxanivorans CB1190 Sterol 3-beta-glucosyltransferase YP_004332027.1 2071535 R 675635 CDS YP_004332028.1 331695789 10363775 2072902..2073297 1 NC_015312.1 hypothetical protein 2073297 10363775 Psed_1944 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332028.1 2072902 D 675635 CDS YP_004332029.1 331695790 10363776 complement(2073341..2073757) 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: mau:Micau_1938 DoxX family protein; DoxX family protein 2073757 10363776 Psed_1945 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004332029.1 2073341 R 675635 CDS YP_004332030.1 331695791 10363777 2073888..2074535 1 NC_015312.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mil:ML5_5247 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 2074535 10363777 Psed_1946 Pseudonocardia dioxanivorans CB1190 lysine exporter protein LysE/YggA YP_004332030.1 2073888 D 675635 CDS YP_004332031.1 331695792 10363779 complement(2076073..2076612) 1 NC_015312.1 PFAM: Protein of unknown function DUF1697; KEGG: cwo:Cwoe_4791 protein of unknown function DUF1697; hypothetical protein 2076612 10363779 Psed_1948 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332031.1 2076073 R 675635 CDS YP_004332032.1 331695793 10363780 complement(2076636..2077835) 1 NC_015312.1 PFAM: CoA-transferase III; KEGG: fri:FraEuI1c_2687 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2077835 10363780 Psed_1949 Pseudonocardia dioxanivorans CB1190 L-carnitine dehydratase/bile acid-inducible protein F YP_004332032.1 2076636 R 675635 CDS YP_004332033.1 331695794 10363781 2078032..2078673 1 NC_015312.1 KEGG: ami:Amir_4801 SNARE associated Golgi protein; hypothetical protein 2078673 10363781 Psed_1950 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332033.1 2078032 D 675635 CDS YP_004332034.1 331695795 10363782 2078732..2078989 1 NC_015312.1 hypothetical protein 2078989 10363782 Psed_1951 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332034.1 2078732 D 675635 CDS YP_004332035.1 331695796 10363783 2079116..2079556 1 NC_015312.1 KEGG: amd:AMED_8935 hypothetical protein; hypothetical protein 2079556 10363783 Psed_1952 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332035.1 2079116 D 675635 CDS YP_004332036.1 331695797 10363784 2079898..2080905 1 NC_015312.1 KEGG: amd:AMED_9175 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 2080905 10363784 Psed_1953 Pseudonocardia dioxanivorans CB1190 cation diffusion facilitator family transporter YP_004332036.1 2079898 D 675635 CDS YP_004332037.1 331695798 10363785 complement(2080987..2082441) 1 NC_015312.1 TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: sen:SACE_3997 glutamate synthase, NADH/NADPH, small subunit 1; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, NADH/NADPH small subunit 2082441 10363785 Psed_1954 Pseudonocardia dioxanivorans CB1190 glutamate synthase, NADH/NADPH small subunit YP_004332037.1 2080987 R 675635 CDS YP_004332038.1 331695799 10363786 complement(2082434..2087002) 1 NC_015312.1 KEGG: sen:SACE_3998 glutamate synthase(NADPH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; glutamate synthase 2087002 10363786 Psed_1955 Pseudonocardia dioxanivorans CB1190 glutamate synthase YP_004332038.1 2082434 R 675635 CDS YP_004332039.1 331695800 10363787 2087389..2088258 1 NC_015312.1 PFAM: FhuF/siderophore biosynthesis protein; KEGG: sro:Sros_5551 hypothetical protein; FhuF/siderophore biosynthesis protein 2088258 10363787 Psed_1956 Pseudonocardia dioxanivorans CB1190 FhuF/siderophore biosynthesis protein YP_004332039.1 2087389 D 675635 CDS YP_004332040.1 331695801 10363788 complement(2088204..2088611) 1 NC_015312.1 KEGG: sro:Sros_8027 hypothetical protein; hypothetical protein 2088611 10363788 Psed_1957 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332040.1 2088204 R 675635 CDS YP_004332041.1 331695802 10363789 complement(2088608..2089264) 1 NC_015312.1 KEGG: scb:SCAB_4341 hypothetical protein; hypothetical protein 2089264 10363789 Psed_1958 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332041.1 2088608 R 675635 CDS YP_004332042.1 331695803 10363790 complement(2089255..2090031) 1 NC_015312.1 KEGG: sgr:SGR_320 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2090031 10363790 Psed_1959 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004332042.1 2089255 R 675635 CDS YP_004332043.1 331695804 10363791 2090157..2090330 1 NC_015312.1 PFAM: CsbD-like; KEGG: nml:Namu_0307 CsbD family protein; CsbD family protein 2090330 10363791 Psed_1960 Pseudonocardia dioxanivorans CB1190 CsbD family protein YP_004332043.1 2090157 D 675635 CDS YP_004332044.1 331695805 10363792 2090479..2090832 1 NC_015312.1 KEGG: sen:SACE_1867 hypothetical protein; hypothetical protein 2090832 10363792 Psed_1961 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332044.1 2090479 D 675635 CDS YP_004332045.1 331695806 10363793 2091116..2092600 1 NC_015312.1 TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: sen:SACE_1359 cell division trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; trigger factor Tig 2092600 10363793 Psed_1962 Pseudonocardia dioxanivorans CB1190 trigger factor Tig YP_004332045.1 2091116 D 675635 CDS YP_004332046.1 331695807 10363794 2092890..2093549 1 NC_015312.1 HAMAP: Peptidase S14, ClpP; KEGG: rer:RER_38150 ATP-dependent Clp protease proteolytic subunit; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit 2093549 10363794 Psed_1963 Pseudonocardia dioxanivorans CB1190 ATP-dependent Clp protease proteolytic subunit YP_004332046.1 2092890 D 675635 CDS YP_004332047.1 331695808 10363795 2093546..2094172 1 NC_015312.1 HAMAP: Peptidase S14, ClpP; KEGG: ami:Amir_1153 endopeptidase Clp; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit 2094172 10363795 Psed_1964 Pseudonocardia dioxanivorans CB1190 ATP-dependent Clp protease proteolytic subunit YP_004332047.1 2093546 D 675635 CDS YP_004332048.1 331695809 10363796 2094347..2095627 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: ami:Amir_1154 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit ClpX 2095627 10363796 Psed_1965 Pseudonocardia dioxanivorans CB1190 ATP-dependent Clp protease ATP-binding subunit ClpX YP_004332048.1 2094347 D 675635 CDS YP_004332049.1 331695810 10363797 complement(2095902..2097107) 1 NC_015312.1 KEGG: fal:FRAAL3412 alpha-methylacyl-CoA racemase; PFAM: CoA-transferase III; formyl-CoA transferase 2097107 10363797 Psed_1966 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004332049.1 2095902 R 675635 CDS YP_004332050.1 331695811 10363798 2097263..2098672 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_6732 integral membrane transporter; major facilitator superfamily protein 2098672 10363798 Psed_1967 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332050.1 2097263 D 675635 CDS YP_004332051.1 331695812 10363799 2098669..2098803 1 NC_015312.1 KEGG: msm:MSMEG_2304 hypothetical protein; hypothetical protein 2098803 10363799 Psed_1968 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332051.1 2098669 D 675635 CDS YP_004332052.1 331695813 10363802 complement(2099849..2100349) 1 NC_015312.1 KEGG: nda:Ndas_0831 F420-dependent enzyme; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 2100349 10363802 Psed_1971 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004332052.1 2099849 R 675635 CDS YP_004332053.1 331695814 10363803 2100389..2101105 1 NC_015312.1 KEGG: mva:Mvan_5721 hypothetical protein; hypothetical protein 2101105 10363803 Psed_1972 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332053.1 2100389 D 675635 CDS YP_004332054.1 331695815 10363804 2101148..2103772 1 NC_015312.1 KEGG: sen:SACE_1384 valyl-tRNA synthetase; manually curated; TIGRFAM: Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; valyl-tRNA synthetase 2103772 10363804 Psed_1973 Pseudonocardia dioxanivorans CB1190 valyl-tRNA synthetase YP_004332054.1 2101148 D 675635 CDS YP_004332055.1 331695816 10363805 2103769..2105274 1 NC_015312.1 TIGRFAM: Folylpolyglutamate synthetase; KEGG: rha:RHA1_ro01317 tetrahydrofolylpolyglutamate synthase; PFAM: Mur ligase, C-terminal; Mur ligase, central; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2105274 10363805 Psed_1974 Pseudonocardia dioxanivorans CB1190 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_004332055.1 2103769 D 675635 CDS YP_004332056.1 331695817 10363806 2105271..2105681 1 NC_015312.1 KEGG: svi:Svir_12380 hypothetical protein; hypothetical protein 2105681 10363806 Psed_1975 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332056.1 2105271 D 675635 CDS YP_004332057.1 331695818 10363807 complement(2105695..2106648) 1 NC_015312.1 KEGG: amd:AMED_7406 lysyl oxidase-like protein; lysyl oxidase-like protein 2106648 10363807 Psed_1976 Pseudonocardia dioxanivorans CB1190 lysyl oxidase-like protein YP_004332057.1 2105695 R 675635 CDS YP_004332058.1 331695819 10363808 2106838..2107248 1 NC_015312.1 SMART: Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; KEGG: sen:SACE_1401 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 2107248 10363808 Psed_1977 Pseudonocardia dioxanivorans CB1190 nucleoside diphosphate kinase YP_004332058.1 2106838 D 675635 CDS YP_004332059.1 331695820 10363809 2107471..2108394 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: ami:Amir_1173 ABC transporter related; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 2108394 10363809 Psed_1978 Pseudonocardia dioxanivorans CB1190 polyamine-transporting ATPase YP_004332059.1 2107471 D 675635 CDS YP_004332060.1 331695821 10363810 2108394..2109230 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: amd:AMED_6710 ABC transport system permease; ABC transporter 2109230 10363810 Psed_1979 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332060.1 2108394 D 675635 CDS YP_004332061.1 331695822 10363811 2109227..2110060 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: amd:AMED_6709 ABC-2 type transporter; ABC transporter 2110060 10363811 Psed_1980 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332061.1 2109227 D 675635 CDS YP_004332062.1 331695823 10363812 2110166..2110516 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: mil:ML5_2039 cupin 2 conserved barrel domain protein; cupin 2110516 10363812 Psed_1981 Pseudonocardia dioxanivorans CB1190 cupin YP_004332062.1 2110166 D 675635 CDS YP_004332063.1 331695824 10363813 2110643..2111434 1 NC_015312.1 KEGG: svi:Svir_26400 hypothetical protein; hypothetical protein 2111434 10363813 Psed_1982 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332063.1 2110643 D 675635 CDS YP_004332064.1 331695825 10363814 2111520..2112398 1 NC_015312.1 TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: abo:ABO_0776 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; dihydrodipicolinate synthase 2112398 10363814 Psed_1983 Pseudonocardia dioxanivorans CB1190 dihydrodipicolinate synthase YP_004332064.1 2111520 D 675635 CDS YP_004332065.1 331695826 10363815 2112567..2114522 1 NC_015312.1 KEGG: sen:SACE_1403 Fe-S oxidoreductase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein 2114522 10363815 Psed_1984 Pseudonocardia dioxanivorans CB1190 Radical SAM domain-containing protein YP_004332065.1 2112567 D 675635 CDS YP_004332066.1 331695827 10363816 2114515..2115069 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: srt:Srot_2543 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2115069 10363816 Psed_1985 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004332066.1 2114515 D 675635 CDS YP_004332067.1 331695828 10363817 2115097..2115867 1 NC_015312.1 PFAM: Protein of unknown function DUF2344; KEGG: sen:SACE_1405 hypothetical protein; hypothetical protein 2115867 10363817 Psed_1986 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332067.1 2115097 D 675635 CDS YP_004332068.1 331695829 10363818 2116047..2119649 1 NC_015312.1 TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Translation initiation factor IF-2, N-terminal; Ribosomal protein S1, RNA-binding domain; KEGG: sen:SACE_1406 ribonuclease; SMART: RNA-binding domain, S1; ribonuclease, Rne/Rng family 2119649 10363818 Psed_1987 Pseudonocardia dioxanivorans CB1190 ribonuclease, Rne/Rng family YP_004332068.1 2116047 D 675635 CDS YP_004332069.1 331695830 10363819 2119791..2120099 1 NC_015312.1 TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: sen:SACE_1414 50S ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 2120099 10363819 Psed_1988 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L21 YP_004332069.1 2119791 D 675635 CDS YP_004332070.1 331695831 10363820 2120112..2120369 1 NC_015312.1 TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: tpr:Tpau_1474 ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 2120369 10363820 Psed_1989 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L27 YP_004332070.1 2120112 D 675635 CDS YP_004332071.1 331695832 10363821 2120455..2122026 1 NC_015312.1 TIGRFAM: GTP-binding protein Obg/CgtA; GTP-binding protein GTP1/OBG, C-terminal; HAMAP: GTP-binding protein Obg/CgtA; KEGG: svi:Svir_12520 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTP-binding protein GTP1/OBG, C-terminal; GTPase obg 2122026 10363821 Psed_1990 Pseudonocardia dioxanivorans CB1190 GTPase obg YP_004332071.1 2120455 D 675635 CDS YP_004332072.1 331695833 10363822 2122023..2123171 1 NC_015312.1 KEGG: ami:Amir_1190 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; HAMAP: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; SMART: Pseudouridine synthase/archaeosine transglycosylase; glutamate 5-kinase 2123171 10363822 Psed_1991 Pseudonocardia dioxanivorans CB1190 glutamate 5-kinase YP_004332072.1 2122023 D 675635 CDS YP_004332073.1 331695834 10363823 2123331..2124581 1 NC_015312.1 manually curated; KEGG: sro:Sros_6795 protein-L-isoaspartate(D-aspartate)O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2124581 10363823 Psed_1992 Pseudonocardia dioxanivorans CB1190 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004332073.1 2123331 D 675635 CDS YP_004332074.1 331695835 10363824 complement(2124586..2126691) 1 NC_015312.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; KEGG: ami:Amir_1193 ATP-dependent DNA helicase, RecQ family; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; ATP-dependent DNA helicase RecQ 2126691 10363824 Psed_1993 Pseudonocardia dioxanivorans CB1190 ATP-dependent DNA helicase RecQ YP_004332074.1 2124586 R 675635 CDS YP_004332075.1 331695836 10363825 2126819..2127703 1 NC_015312.1 KEGG: rha:RHA1_ro01299 hypothetical protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 2127703 10363825 Psed_1994 Pseudonocardia dioxanivorans CB1190 ATPase YP_004332075.1 2126819 D 675635 CDS YP_004332076.1 331695837 10363826 2127703..2129121 1 NC_015312.1 PFAM: vWA containing CoxE-like; KEGG: rop:ROP_10200 hypothetical protein; von Willebrand factor A 2129121 10363826 Psed_1995 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004332076.1 2127703 D 675635 CDS YP_004332077.1 331695838 10363827 2129290..2129610 1 NC_015312.1 KEGG: cwo:Cwoe_3384 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 2129610 10363827 Psed_1996 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004332077.1 2129290 D 675635 CDS YP_004332078.1 331695839 10363828 2129603..2129905 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: amd:AMED_0950 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 2129905 10363828 Psed_1997 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004332078.1 2129603 D 675635 CDS YP_004332079.1 331695840 10363829 2130012..2130365 1 NC_015312.1 KEGG: sgr:SGR_1198 hypothetical protein; hypothetical protein 2130365 10363829 Psed_1998 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332079.1 2130012 D 675635 CDS YP_004332080.1 331695841 10363830 2130429..2133752 1 NC_015312.1 KEGG: sro:Sros_0735 ATPase-like protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 2133752 10363830 Psed_1999 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004332080.1 2130429 D 675635 CDS YP_004332081.1 331695842 10363831 complement(2133763..2134434) 1 NC_015312.1 PFAM: Haemerythrin/HHE cation-binding motif; KEGG: sro:Sros_0736 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 2134434 10363831 Psed_2000 Pseudonocardia dioxanivorans CB1190 hemerythrin HHE cation binding domain-containing protein YP_004332081.1 2133763 R 675635 CDS YP_004332082.1 331695843 10363832 2134676..2134999 1 NC_015312.1 KEGG: sen:SACE_6240 hypothetical protein; hypothetical protein 2134999 10363832 Psed_2001 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332082.1 2134676 D 675635 CDS YP_004332083.1 331695844 10363833 2135097..2135660 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_1576 TetR family transcriptional regulator; TetR family transcriptional regulator 2135660 10363833 Psed_2002 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332083.1 2135097 D 675635 CDS YP_004332084.1 331695845 10363834 2135689..2136306 1 NC_015312.1 KEGG: afw:Anae109_1653 alkylated DNA repair protein; alkylated DNA repair protein 2136306 10363834 Psed_2003 Pseudonocardia dioxanivorans CB1190 alkylated DNA repair protein YP_004332084.1 2135689 D 675635 CDS YP_004332085.1 331695846 10363835 2136336..2136938 1 NC_015312.1 PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; KEGG: sen:SACE_1428 nicotinate-nucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase 2136938 10363835 Psed_2004 Pseudonocardia dioxanivorans CB1190 nicotinate-nucleotide adenylyltransferase YP_004332085.1 2136336 D 675635 CDS YP_004332086.1 331695847 10363836 2137014..2137436 1 NC_015312.1 KEGG: ami:Amir_1198 iojap-like protein; TIGRFAM: Ribosome-associated, Iojap-like; PFAM: Ribosome-associated, Iojap-like; iojap family protein 2137436 10363836 Psed_2005 Pseudonocardia dioxanivorans CB1190 iojap family protein YP_004332086.1 2137014 D 675635 CDS YP_004332087.1 331695848 10363837 2137433..2138059 1 NC_015312.1 KEGG: amd:AMED_6693 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 2138059 10363837 Psed_2006 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004332087.1 2137433 D 675635 CDS YP_004332088.1 331695849 10363838 2138056..2138835 1 NC_015312.1 KEGG: ami:Amir_1200 hypothetical protein; hypothetical protein 2138835 10363838 Psed_2007 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332088.1 2138056 D 675635 CDS YP_004332089.1 331695850 10363839 2138847..2139770 1 NC_015312.1 KEGG: ami:Amir_1201 DegV family protein; TIGRFAM: DegV; PFAM: DegV; degV family protein 2139770 10363839 Psed_2008 Pseudonocardia dioxanivorans CB1190 degV family protein YP_004332089.1 2138847 D 675635 CDS YP_004332090.1 331695851 10363840 2140196..2140981 1 NC_015312.1 TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; PFAM: Soluble ligand binding domain; Helix-hairpin-helix motif; KEGG: nml:Namu_1518 competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1; competence protein ComEA 2140981 10363840 Psed_2009 Pseudonocardia dioxanivorans CB1190 competence protein ComEA YP_004332090.1 2140196 D 675635 CDS YP_004332091.1 331695852 10363842 complement(2143417..2144682) 1 NC_015312.1 TIGRFAM: Threonine synthase; KEGG: ami:Amir_1205 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 2144682 10363842 Psed_2011 Pseudonocardia dioxanivorans CB1190 threonine synthase YP_004332091.1 2143417 R 675635 CDS YP_004332092.1 331695853 10363843 2144900..2145928 1 NC_015312.1 KEGG: svi:Svir_12630 hypothetical protein; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 2145928 10363843 Psed_2012 Pseudonocardia dioxanivorans CB1190 DNA polymerase III subunit delta YP_004332092.1 2144900 D 675635 CDS YP_004332093.1 331695854 10363844 complement(2146777..2147052) 1 NC_015312.1 TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: svi:Svir_12640 SSU ribosomal protein S20P; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 2147052 10363844 Psed_2013 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S20 YP_004332093.1 2146777 R 675635 CDS YP_004332094.1 331695855 10363845 2147258..2148013 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: gob:Gobs_3876 alpha/beta hydrolase fold protein; alpha/beta hydrolase 2148013 10363845 Psed_2014 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004332094.1 2147258 D 675635 CDS YP_004332095.1 331695856 10363846 complement(2148036..2149841) 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; NHL repeat; KEGG: krh:KRH_03700 hypothetical protein; alkyl hydroperoxide reductase 2149841 10363846 Psed_2015 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004332095.1 2148036 R 675635 CDS YP_004332096.1 331695857 10363847 complement(2149938..2150756) 1 NC_015312.1 KEGG: rha:RHA1_ro05056 ABC transporter, ATP-binding component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2150756 10363847 Psed_2016 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332096.1 2149938 R 675635 CDS YP_004332097.1 331695858 10363848 2150820..2151626 1 NC_015312.1 PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: kra:Krad_0151 DNA-(apurinic or apyrimidinic site) lyase; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-formamidopyrimidine glycosylase 2151626 10363848 Psed_2017 Pseudonocardia dioxanivorans CB1190 DNA-formamidopyrimidine glycosylase YP_004332097.1 2150820 D 675635 CDS YP_004332098.1 331695859 10363849 complement(2151748..2152569) 1 NC_015312.1 KEGG: nml:Namu_1164 PA-phosphatase-like phosphoesterase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 2152569 10363849 Psed_2018 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004332098.1 2151748 R 675635 CDS YP_004332099.1 331695860 10363850 complement(2152613..2154277) 1 NC_015312.1 HAMAP: Phosphoglucose isomerase (PGI); KEGG: jde:Jden_0370 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 2154277 10363850 Psed_2019 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate isomerase YP_004332099.1 2152613 R 675635 CDS YP_004332100.1 331695861 10363851 2154325..2154681 1 NC_015312.1 hypothetical protein 2154681 10363851 Psed_2020 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332100.1 2154325 D 675635 CDS YP_004332101.1 331695862 10363852 2155002..2155820 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: sro:Sros_7264 membrane protein-like protein; DoxX family protein 2155820 10363852 Psed_2021 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004332101.1 2155002 D 675635 CDS YP_004332102.1 331695863 10363853 2155932..2156771 1 NC_015312.1 KEGG: nda:Ndas_1956 hypothetical protein; hypothetical protein 2156771 10363853 Psed_2022 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332102.1 2155932 D 675635 CDS YP_004332103.1 331695864 10363854 2156777..2157199 1 NC_015312.1 KEGG: gob:Gobs_1065 hypothetical protein; hypothetical protein 2157199 10363854 Psed_2023 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332103.1 2156777 D 675635 CDS YP_004332104.1 331695865 10363855 2157246..2158310 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: fre:Franean1_6920 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2158310 10363855 Psed_2024 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004332104.1 2157246 D 675635 CDS YP_004332105.1 331695866 10363856 2158468..2159082 1 NC_015312.1 KEGG: amd:AMED_5932 hypothetical protein; hypothetical protein 2159082 10363856 Psed_2025 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332105.1 2158468 D 675635 CDS YP_004332106.1 331695867 10363857 complement(2159163..2160584) 1 NC_015312.1 TIGRFAM: Glutamate decarboxylase; KEGG: nfa:nfa35400 glutamate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; glutamate decarboxylase 2160584 10363857 Psed_2026 Pseudonocardia dioxanivorans CB1190 glutamate decarboxylase YP_004332106.1 2159163 R 675635 CDS YP_004332107.1 331695868 10363858 2160609..2161874 1 NC_015312.1 PFAM: Uncharacterised conserved protein UCP012608; KEGG: svi:Svir_06550 hypothetical protein; hypothetical protein 2161874 10363858 Psed_2027 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332107.1 2160609 D 675635 CDS YP_004332108.1 331695869 10363859 complement(2161861..2162646) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: sma:SAV_81 oligosaccharide deacetylase; polysaccharide deacetylase 2162646 10363859 Psed_2028 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004332108.1 2161861 R 675635 CDS YP_004332109.1 331695870 10363860 complement(2162713..2163615) 1 NC_015312.1 KEGG: gob:Gobs_2301 hypothetical protein; hypothetical protein 2163615 10363860 Psed_2029 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332109.1 2162713 R 675635 CDS YP_004332110.1 331695871 10363861 complement(2163661..2164986) 1 NC_015312.1 KEGG: gob:Gobs_2495 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 2164986 10363861 Psed_2030 Pseudonocardia dioxanivorans CB1190 linalool 8-monooxygenase YP_004332110.1 2163661 R 675635 CDS YP_004332111.1 331695872 10363862 2165125..2166018 1 NC_015312.1 PFAM: Metallo-dependent phosphatase; KEGG: fra:Francci3_1505 metallophosphoesterase; metallophosphoesterase 2166018 10363862 Psed_2031 Pseudonocardia dioxanivorans CB1190 metallophosphoesterase YP_004332111.1 2165125 D 675635 CDS YP_004332112.1 331695873 10363863 complement(2166062..2166313) 1 NC_015312.1 TIGRFAM: Ribosomal protein L31; HAMAP: Ribosomal protein L31; KEGG: amd:AMED_5005 large subunit ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 2166313 10363863 Psed_2032 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L31 YP_004332112.1 2166062 R 675635 CDS YP_004332113.1 331695874 10363864 complement(2166385..2167413) 1 NC_015312.1 PFAM: Periplasmic binding protein; KEGG: rer:RER_04570 iron-siderophore binding protein; ABC transporter substrate-binding protein 2167413 10363864 Psed_2033 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332113.1 2166385 R 675635 CDS YP_004332114.1 331695875 10363865 2167595..2168980 1 NC_015312.1 PFAM: Chloride channel, voltage gated; KEGG: afo:Afer_0254 chloride channel core; Cl- channel voltage-gated family protein 2168980 10363865 Psed_2034 Pseudonocardia dioxanivorans CB1190 Cl- channel voltage-gated family protein YP_004332114.1 2167595 D 675635 CDS YP_004332115.1 331695876 10363866 complement(2169130..2170383) 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: mab:MAB_0330 beta-lactamase; beta-lactamase 2170383 10363866 Psed_2035 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004332115.1 2169130 R 675635 CDS YP_004332116.1 331695877 10363867 2170630..2171238 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sna:Snas_3554 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 2171238 10363867 Psed_2036 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004332116.1 2170630 D 675635 CDS YP_004332117.1 331695878 10363872 complement(2172205..2172624) 1 NC_015312.1 PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: ami:Amir_2015 sporulation and cell division protein SsgA; sporulation and cell division protein SsgA 2172624 10363872 Psed_2038 Pseudonocardia dioxanivorans CB1190 sporulation and cell division protein SsgA YP_004332117.1 2172205 R 675635 CDS YP_004332118.1 331695879 10363873 2172867..2173523 1 NC_015312.1 KEGG: ami:Amir_2016 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2173523 10363873 Psed_2039 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004332118.1 2172867 D 675635 CDS YP_004332119.1 331695880 10363874 2173520..2174491 1 NC_015312.1 KEGG: gob:Gobs_3193 transmembrane anti-sigma factor; transmembrane anti-sigma factor 2174491 10363874 Psed_2040 Pseudonocardia dioxanivorans CB1190 transmembrane anti-sigma factor YP_004332119.1 2173520 D 675635 CDS YP_004332120.1 331695881 10363877 complement(2175242..2175973) 1 NC_015312.1 KEGG: rbi:RB2501_04000 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 2175973 10363877 Psed_2042 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004332120.1 2175242 R 675635 CDS YP_004332121.1 331695882 10363878 complement(2176057..2176608) 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: gob:Gobs_4877 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 2176608 10363878 Psed_2043 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004332121.1 2176057 R 675635 CDS YP_004332122.1 331695883 10363879 complement(2176595..2176975) 1 NC_015312.1 KEGG: gob:Gobs_4878 transcriptional regulator TrmB; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 2176975 10363879 Psed_2044 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004332122.1 2176595 R 675635 CDS YP_004332123.1 331695884 10363880 2177273..2178145 1 NC_015312.1 PFAM: Major intrinsic protein; KEGG: nml:Namu_0790 major intrinsic protein; major intrinsic protein 2178145 10363880 Psed_2045 Pseudonocardia dioxanivorans CB1190 major intrinsic protein YP_004332123.1 2177273 D 675635 CDS YP_004332124.1 331695885 10363881 complement(2178280..2179680) 1 NC_015312.1 TIGRFAM: Glutamate decarboxylase; KEGG: bav:BAV2797 glutamate decarboxylase alpha/beta; PFAM: Pyridoxal phosphate-dependent decarboxylase; glutamate decarboxylase 2179680 10363881 Psed_2046 Pseudonocardia dioxanivorans CB1190 glutamate decarboxylase YP_004332124.1 2178280 R 675635 CDS YP_004332125.1 331695886 10363882 2179867..2180859 1 NC_015312.1 KEGG: nml:Namu_1376 hypothetical protein; hypothetical protein 2180859 10363882 Psed_2047 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332125.1 2179867 D 675635 CDS YP_004332126.1 331695887 10363883 complement(2180873..2181484) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: art:Arth_3112 TetR family transcriptional regulator; TetR family transcriptional regulator 2181484 10363883 Psed_2048 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332126.1 2180873 R 675635 CDS YP_004332127.1 331695888 10363884 2181557..2181877 1 NC_015312.1 KEGG: art:Arth_3235 hypothetical protein; hypothetical protein 2181877 10363884 Psed_2049 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332127.1 2181557 D 675635 CDS YP_004332128.1 331695889 10363885 complement(2181884..2182846) 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: nfa:nfa55550 hypothetical protein; hypothetical protein 2182846 10363885 Psed_2050 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332128.1 2181884 R 675635 CDS YP_004332129.1 331695890 10363886 2183104..2184513 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4982 integral membrane transport protein; major facilitator superfamily protein 2184513 10363886 Psed_2051 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332129.1 2183104 D 675635 CDS YP_004332130.1 331695891 10363887 2184637..2186307 1 NC_015312.1 KEGG: fri:FraEuI1c_4109 hydrolase CocE/NonD family protein; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein 2186307 10363887 Psed_2052 Pseudonocardia dioxanivorans CB1190 hydrolase CocE/NonD family protein YP_004332130.1 2184637 D 675635 CDS YP_004332131.1 331695892 10363888 complement(2186354..2187370) 1 NC_015312.1 KEGG: msm:MSMEG_5829 Dyp-type peroxidase; TIGRFAM: Dyp-type peroxidase; PFAM: Dyp-type peroxidase; dyp-type peroxidase protein 2187370 10363888 Psed_2053 Pseudonocardia dioxanivorans CB1190 dyp-type peroxidase protein YP_004332131.1 2186354 R 675635 CDS YP_004332132.1 331695893 10363889 complement(2187523..2188533) 1 NC_015312.1 SMART: DNA helicase, ATP-dependent, Ku type; TIGRFAM: Ku, prokaryotic type; KEGG: sco:SCO0601 secreted protein; HAMAP: Ku, prokaryotic type; PFAM: DNA helicase, ATP-dependent, Ku type; DNA repair protein 2188533 10363889 Psed_2054 Pseudonocardia dioxanivorans CB1190 DNA repair protein YP_004332132.1 2187523 R 675635 CDS YP_004332133.1 331695894 10363890 2188683..2189069 1 NC_015312.1 KEGG: tpr:Tpau_2157 hypothetical protein; hypothetical protein 2189069 10363890 Psed_2055 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332133.1 2188683 D 675635 CDS YP_004332134.1 331695895 10363891 complement(2189313..2190641) 1 NC_015312.1 KEGG: fri:FraEuI1c_4558 nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Luciferase-like, subgroup; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 2190641 10363891 Psed_2056 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004332134.1 2189313 R 675635 CDS YP_004332135.1 331695896 10363892 complement(2190638..2191570) 1 NC_015312.1 KEGG: fre:Franean1_6909 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain; citryl-CoA lyase 2191570 10363892 Psed_2057 Pseudonocardia dioxanivorans CB1190 citryl-CoA lyase YP_004332135.1 2190638 R 675635 CDS YP_004332136.1 331695897 10363893 complement(2191625..2192833) 1 NC_015312.1 KEGG: amd:AMED_7135 acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase III; formyl-CoA transferase 2192833 10363893 Psed_2058 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004332136.1 2191625 R 675635 CDS YP_004332137.1 331695898 10363894 complement(2192830..2193906) 1 NC_015312.1 KEGG: bbr:BB2819 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 2193906 10363894 Psed_2059 Pseudonocardia dioxanivorans CB1190 LacI family transcriptional regulator YP_004332137.1 2192830 R 675635 CDS YP_004332138.1 331695899 10363895 2194058..2194684 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0832 transcriptional regulator, TetR family; TetR family transcriptional regulator 2194684 10363895 Psed_2060 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332138.1 2194058 D 675635 CDS YP_004332139.1 331695900 10363896 2194935..2196521 1 NC_015312.1 KEGG: cwo:Cwoe_3882 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 2196521 10363896 Psed_2061 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004332139.1 2194935 D 675635 CDS YP_004332140.1 331695901 10363897 complement(2196743..2197420) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: ade:Adeh_1645 short chain enoyl-CoA hydratase; enoyl-CoA hydratase 2197420 10363897 Psed_2062 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332140.1 2196743 R 675635 CDS YP_004332141.1 331695902 10363898 complement(2197417..2198160) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: ace:Acel_0400 short chain enoyl-CoA hydratase; enoyl-CoA hydratase 2198160 10363898 Psed_2063 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332141.1 2197417 R 675635 CDS YP_004332142.1 331695903 10363899 2198382..2199542 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpt:Bpet2312 Leu/Ile/Val-binding protein precursor; ABC transporter substrate-binding protein 2199542 10363899 Psed_2064 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332142.1 2198382 D 675635 CDS YP_004332143.1 331695904 10363900 2199664..2200719 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: slp:Slip_2360 inner-membrane translocator; ABC transporter permease 2200719 10363900 Psed_2065 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332143.1 2199664 D 675635 CDS YP_004332144.1 331695905 10363901 2200716..2201486 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: mno:Mnod_0334 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 2201486 10363901 Psed_2066 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004332144.1 2200716 D 675635 CDS YP_004332145.1 331695906 10363902 2201483..2202190 1 NC_015312.1 KEGG: msl:Msil_0063 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2202190 10363902 Psed_2067 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332145.1 2201483 D 675635 CDS YP_004332146.1 331695907 10363903 2202194..2203060 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: sgo:SGO_1629 branched-chain amino acid permease; ABC transporter permease 2203060 10363903 Psed_2068 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332146.1 2202194 D 675635 CDS YP_004332147.1 331695908 10363904 2203057..2203872 1 NC_015312.1 KEGG: sai:Saci_1633 3-hydroxybutyryl-CoA dehydratase; PFAM: Crotonase, core; enoyl-CoA hydratase 2203872 10363904 Psed_2069 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332147.1 2203057 D 675635 CDS YP_004332148.1 331695909 10363905 2203869..2204921 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: acp:A2cp1_3027 alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 2204921 10363905 Psed_2070 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004332148.1 2203869 D 675635 CDS YP_004332149.1 331695910 10363906 2204938..2206275 1 NC_015312.1 PFAM: MmgE/PrpD; KEGG: bbr:BB4700 hypothetical protein; MmgE/PrpD family protein 2206275 10363906 Psed_2071 Pseudonocardia dioxanivorans CB1190 MmgE/PrpD family protein YP_004332149.1 2204938 D 675635 CDS YP_004332150.1 331695911 10363907 2206272..2206778 1 NC_015312.1 KEGG: rha:RHA1_ro00762 hypothetical protein; hypothetical protein 2206778 10363907 Psed_2072 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332150.1 2206272 D 675635 CDS YP_004332151.1 331695912 10363908 2206775..2207224 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: mav:MAV_3005 MaoC like domain-containing protein; acyl dehydratase MaoC 2207224 10363908 Psed_2073 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004332151.1 2206775 D 675635 CDS YP_004332152.1 331695913 10363909 2207221..2208186 1 NC_015312.1 KEGG: tro:trd_1493 TPP-dependent acetoin dehydrogenase alpha-subunit; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 2208186 10363909 Psed_2074 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004332152.1 2207221 D 675635 CDS YP_004332153.1 331695914 10363910 2208186..2209172 1 NC_015312.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: bpe:BP0628 pyruvate dehydrogenase E1 beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 2209172 10363910 Psed_2075 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004332153.1 2208186 D 675635 CDS YP_004332154.1 331695915 10363911 2209169..2209429 1 NC_015312.1 PFAM: Biotin/lipoyl attachment; KEGG: mmr:Mmar10_2816 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; biotin/lipoyl attachment domain-containing protein 2209429 10363911 Psed_2076 Pseudonocardia dioxanivorans CB1190 biotin/lipoyl attachment domain-containing protein YP_004332154.1 2209169 D 675635 CDS YP_004332155.1 331695916 10363912 2209458..2211008 1 NC_015312.1 KEGG: drm:Dred_0576 crotonobetaine/carnitine-CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 2211008 10363912 Psed_2077 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004332155.1 2209458 D 675635 CDS YP_004332156.1 331695917 10363913 2211018..2211662 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0832 transcriptional regulator, TetR family; TetR family transcriptional regulator 2211662 10363913 Psed_2078 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332156.1 2211018 D 675635 CDS YP_004332157.1 331695918 10363914 2211762..2213738 1 NC_015312.1 KEGG: rop:ROP_25260 flavin-containing monooxygenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; 4-hydroxyacetophenone monooxygenase 2213738 10363914 Psed_2079 Pseudonocardia dioxanivorans CB1190 4-hydroxyacetophenone monooxygenase YP_004332157.1 2211762 D 675635 CDS YP_004332158.1 331695919 10363915 complement(2213711..2214226) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ami:Amir_2775 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2214226 10363915 Psed_2080 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004332158.1 2213711 R 675635 CDS YP_004332159.1 331695920 10363916 complement(2214287..2216155) 1 NC_015312.1 PFAM: Helix-turn-helix, Fis-type; KEGG: rha:RHA1_ro10163 transcriptional regulator; Fis family transcriptional regulator 2216155 10363916 Psed_2081 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004332159.1 2214287 R 675635 CDS YP_004332160.1 331695921 10363917 2216340..2216633 1 NC_015312.1 KEGG: nml:Namu_2338 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; microcompartments protein 2216633 10363917 Psed_2082 Pseudonocardia dioxanivorans CB1190 microcompartments protein YP_004332160.1 2216340 D 675635 CDS YP_004332161.1 331695922 10363918 complement(2216641..2218809) 1 NC_015312.1 KEGG: nml:Namu_2339 PucR family transcriptional regulator; PFAM: GAF; SMART: GAF; PucR family transcriptional regulator 2218809 10363918 Psed_2083 Pseudonocardia dioxanivorans CB1190 PucR family transcriptional regulator YP_004332161.1 2216641 R 675635 CDS YP_004332162.1 331695923 10363919 complement(2218827..2219861) 1 NC_015312.1 KEGG: nml:Namu_2340 alcohol dehydrogenase GroES domain-containing protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES 2219861 10363919 Psed_2084 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroES YP_004332162.1 2218827 R 675635 CDS YP_004332163.1 331695924 10363920 complement(2219858..2221150) 1 NC_015312.1 HAMAP: Malate dehydrogenase, NAD-dependent; KEGG: nml:Namu_2341 lactate/malate dehydrogenase; PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal; malate dehydrogenase 2221150 10363920 Psed_2085 Pseudonocardia dioxanivorans CB1190 malate dehydrogenase YP_004332163.1 2219858 R 675635 CDS YP_004332164.1 331695925 10363921 complement(2221147..2221788) 1 NC_015312.1 KEGG: nml:Namu_2342 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; microcompartments protein 2221788 10363921 Psed_2086 Pseudonocardia dioxanivorans CB1190 microcompartments protein YP_004332164.1 2221147 R 675635 CDS YP_004332165.1 331695926 10363922 complement(2221785..2222651) 1 NC_015312.1 TIGRFAM: Ethanolamine utilisation EutJ; KEGG: nml:Namu_2343 ethanolamine utilization protein EutJ family protein; ethanolamine utilization protein EutJ family protein 2222651 10363922 Psed_2087 Pseudonocardia dioxanivorans CB1190 ethanolamine utilization protein EutJ family protein YP_004332165.1 2221785 R 675635 CDS YP_004332166.1 331695927 10363923 complement(2222652..2224040) 1 NC_015312.1 KEGG: nml:Namu_2344 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; acetaldehyde dehydrogenase 2224040 10363923 Psed_2088 Pseudonocardia dioxanivorans CB1190 acetaldehyde dehydrogenase YP_004332166.1 2222652 R 675635 CDS YP_004332167.1 331695928 10363924 complement(2224125..2224454) 1 NC_015312.1 KEGG: nml:Namu_2345 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; microcompartments protein 2224454 10363924 Psed_2089 Pseudonocardia dioxanivorans CB1190 microcompartments protein YP_004332167.1 2224125 R 675635 CDS YP_004332168.1 331695929 10363925 complement(2224493..2224786) 1 NC_015312.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: nml:Namu_2346 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 2224786 10363925 Psed_2090 Pseudonocardia dioxanivorans CB1190 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_004332168.1 2224493 R 675635 CDS YP_004332169.1 331695930 10363926 2224982..2225989 1 NC_015312.1 KEGG: nml:Namu_2347 hypothetical protein; hypothetical protein 2225989 10363926 Psed_2091 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332169.1 2224982 D 675635 CDS YP_004332170.1 331695931 10363927 2225997..2226959 1 NC_015312.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nml:Namu_2348 haloacid dehalogenase domain-containing protein hydrolase; haloacid dehalogenase 2226959 10363927 Psed_2092 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004332170.1 2225997 D 675635 CDS YP_004332171.1 331695932 10363928 2226956..2227699 1 NC_015312.1 KEGG: nml:Namu_2349 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 2227699 10363928 Psed_2093 Pseudonocardia dioxanivorans CB1190 protein tyrosine/serine phosphatase YP_004332171.1 2226956 D 675635 CDS YP_004332172.1 331695933 10363929 complement(2227738..2230203) 1 NC_015312.1 KEGG: nml:Namu_2357 pyruvate phosphate dikinase PEP/pyruvate-binding; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; pyruvate, phosphate dikinase 2230203 10363929 Psed_2094 Pseudonocardia dioxanivorans CB1190 pyruvate, phosphate dikinase YP_004332172.1 2227738 R 675635 CDS YP_004332173.1 331695934 10363930 complement(2230200..2230820) 1 NC_015312.1 KEGG: nml:Namu_2358 hypothetical protein; hypothetical protein 2230820 10363930 Psed_2095 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332173.1 2230200 R 675635 CDS YP_004332174.1 331695935 10363931 complement(2230909..2232342) 1 NC_015312.1 KEGG: nml:Namu_2359 hypothetical protein; hypothetical protein 2232342 10363931 Psed_2096 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332174.1 2230909 R 675635 CDS YP_004332175.1 331695936 10363932 complement(2232357..2232776) 1 NC_015312.1 KEGG: nml:Namu_2360 hypothetical protein; hypothetical protein 2232776 10363932 Psed_2097 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332175.1 2232357 R 675635 CDS YP_004332176.1 331695937 10363933 complement(2233139..2233972) 1 NC_015312.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: fal:FRAAL4216 bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD 2233972 10363933 Psed_2098 Pseudonocardia dioxanivorans CB1190 bifunctional protein folD YP_004332176.1 2233139 R 675635 CDS YP_004332177.1 331695938 10363934 complement(2233969..2234967) 1 NC_015312.1 KEGG: amd:AMED_2190 adenosine kinase; PFAM: Carbohydrate/purine kinase; adenosine kinase 2234967 10363934 Psed_2099 Pseudonocardia dioxanivorans CB1190 adenosine kinase YP_004332177.1 2233969 R 675635 CDS YP_004332178.1 331695939 10363935 complement(2234985..2235911) 1 NC_015312.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: svi:Svir_11670 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase 2235911 10363935 Psed_2100 Pseudonocardia dioxanivorans CB1190 formyltetrahydrofolate deformylase YP_004332178.1 2234985 R 675635 CDS YP_004332179.1 331695940 10363936 complement(2235911..2237146) 1 NC_015312.1 PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; KEGG: cwo:Cwoe_3729 S-adenosylmethionine synthetase; S-adenosylmethionine synthase 2237146 10363936 Psed_2101 Pseudonocardia dioxanivorans CB1190 S-adenosylmethionine synthase YP_004332179.1 2235911 R 675635 CDS YP_004332180.1 331695941 10363937 complement(2237149..2238279) 1 NC_015312.1 KEGG: iag:Igag_0649 methionine synthase (B12-independent); PFAM: Methionine synthase, vitamin-B12 independent; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 2238279 10363937 Psed_2102 Pseudonocardia dioxanivorans CB1190 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_004332180.1 2237149 R 675635 CDS YP_004332181.1 331695942 10363938 complement(2238279..2239781) 1 NC_015312.1 KEGG: cwo:Cwoe_4355 hypothetical protein; hypothetical protein 2239781 10363938 Psed_2103 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332181.1 2238279 R 675635 CDS YP_004332182.1 331695943 10363939 complement(2239771..2240757) 1 NC_015312.1 PFAM: Methylenetetrahydrofolate reductase; KEGG: dbr:Deba_2153 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 2240757 10363939 Psed_2104 Pseudonocardia dioxanivorans CB1190 methylenetetrahydrofolate reductase YP_004332182.1 2239771 R 675635 CDS YP_004332183.1 331695944 10363940 complement(2240754..2241326) 1 NC_015312.1 KEGG: ara:Arad_2827 hypothetical protein; hypothetical protein 2241326 10363940 Psed_2105 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332183.1 2240754 R 675635 CDS YP_004332184.1 331695945 10363941 2241570..2242976 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; KEGG: rrs:RoseRS_0141 transcriptional regulator, CdaR; transcriptional regulator CdaR 2242976 10363941 Psed_2106 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004332184.1 2241570 D 675635 CDS YP_004332185.1 331695946 10363942 2242973..2244784 1 NC_015312.1 KEGG: tro:trd_1049 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; PFAM: Homocysteine S-methyltransferase; Methylenetetrahydrofolate reductase; methionine synthase 2244784 10363942 Psed_2107 Pseudonocardia dioxanivorans CB1190 methionine synthase YP_004332185.1 2242973 D 675635 CDS YP_004332186.1 331695947 10363943 2244917..2246770 1 NC_015312.1 PFAM: Acyltransferase 3; KEGG: rxy:Rxyl_2066 acyltransferase 3; acyltransferase 2246770 10363943 Psed_2108 Pseudonocardia dioxanivorans CB1190 acyltransferase YP_004332186.1 2244917 D 675635 CDS YP_004332187.1 331695948 10363944 2247117..2248361 1 NC_015312.1 KEGG: sti:Sthe_1149 protein of unknown function DUF201; hypothetical protein 2248361 10363944 Psed_2109 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332187.1 2247117 D 675635 CDS YP_004332188.1 331695949 10363945 complement(2248387..2250402) 1 NC_015312.1 KEGG: req:REQ_42420 metallopeptidase; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal; neprilysin 2250402 10363945 Psed_2110 Pseudonocardia dioxanivorans CB1190 neprilysin YP_004332188.1 2248387 R 675635 CDS YP_004332189.1 331695950 10363946 2250512..2251951 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nml:Namu_2999 major facilitator superfamily protein; major facilitator superfamily protein 2251951 10363946 Psed_2111 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332189.1 2250512 D 675635 CDS YP_004332190.1 331695951 10363947 complement(2251958..2252353) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: ami:Amir_3902 cupin 2 conserved barrel domain protein; cupin 2252353 10363947 Psed_2112 Pseudonocardia dioxanivorans CB1190 cupin YP_004332190.1 2251958 R 675635 CDS YP_004332191.1 331695952 10363948 complement(2252460..2253167) 1 NC_015312.1 KEGG: fri:FraEuI1c_0640 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 2253167 10363948 Psed_2113 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004332191.1 2252460 R 675635 CDS YP_004332192.1 331695953 10363949 complement(2253164..2253349) 1 NC_015312.1 hypothetical protein 2253349 10363949 Psed_2114 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332192.1 2253164 R 675635 CDS YP_004332193.1 331695954 10363950 complement(2253611..2255713) 1 NC_015312.1 PFAM: Protein of unknown function DUF349; KEGG: ami:Amir_1442 protein of unknown function DUF349; hypothetical protein 2255713 10363950 Psed_2115 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332193.1 2253611 R 675635 CDS YP_004332194.1 331695955 10363951 2255928..2256647 1 NC_015312.1 KEGG: ami:Amir_1441 hypothetical protein; hypothetical protein 2256647 10363951 Psed_2116 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332194.1 2255928 D 675635 CDS YP_004332195.1 331695956 10363952 2256644..2257639 1 NC_015312.1 PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: ami:Amir_1440 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA dimethylallyltransferase 2257639 10363952 Psed_2117 Pseudonocardia dioxanivorans CB1190 tRNA dimethylallyltransferase YP_004332195.1 2256644 D 675635 CDS YP_004332196.1 331695957 10363953 2257645..2258520 1 NC_015312.1 TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: ami:Amir_1439 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; diaminopimelate epimerase 2258520 10363953 Psed_2118 Pseudonocardia dioxanivorans CB1190 diaminopimelate epimerase YP_004332196.1 2257645 D 675635 CDS YP_004332197.1 331695958 10363954 2258587..2260068 1 NC_015312.1 KEGG: amd:AMED_2389 GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein HflX 2260068 10363954 Psed_2119 Pseudonocardia dioxanivorans CB1190 GTP-binding protein HflX YP_004332197.1 2258587 D 675635 CDS YP_004332198.1 331695959 10363955 complement(2260777..2261187) 1 NC_015312.1 KEGG: lma:LmjF35.0540 proteophosphoglycan 5; proteophosphoglycan 5 2261187 10363955 Psed_2120 Pseudonocardia dioxanivorans CB1190 proteophosphoglycan 5 YP_004332198.1 2260777 R 675635 CDS YP_004332199.1 331695960 10363956 complement(2261243..2261827) 1 NC_015312.1 KEGG: acp:A2cp1_0929 hypothetical protein; hypothetical protein 2261827 10363956 Psed_2121 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332199.1 2261243 R 675635 CDS YP_004332200.1 331695961 10363957 complement(2263591..2264322) 1 NC_015312.1 TIGRFAM: Peptidase S24, LexA repressor; HAMAP: Peptidase S24, LexA repressor; KEGG: gob:Gobs_3902 LexA family transcriptional regulator; PFAM: LexA, DNA-binding domain; Peptidase S24/S26A/S26B, conserved region; SOS-response transcriptional repressor, LexA 2264322 10363957 Psed_2122 Pseudonocardia dioxanivorans CB1190 SOS-response transcriptional repressor, LexA YP_004332200.1 2263591 R 675635 CDS YP_004332201.1 331695962 10363958 2264897..2265472 1 NC_015312.1 KEGG: amd:AMED_2392 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein 2265472 10363958 Psed_2123 Pseudonocardia dioxanivorans CB1190 peptidoglycan-binding lysin domain-containing protein YP_004332201.1 2264897 D 675635 CDS YP_004332202.1 331695963 10363959 2266095..2266574 1 NC_015312.1 PFAM: ATP-cone; manually curated; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; KEGG: amd:AMED_2393 transcriptional regulator NrdR; HAMAP: Ribonucleotide reductase regulator NrdR-like; transcriptional repressor nrdR 2266574 10363959 Psed_2124 Pseudonocardia dioxanivorans CB1190 transcriptional repressor nrdR YP_004332202.1 2266095 D 675635 CDS YP_004332203.1 331695964 10363960 2266745..2269609 1 NC_015312.1 TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: ami:Amir_1431 vitamin B12-dependent ribonucleotide reductase; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; Ribonucleotide reductase large subunit, C-terminal; ribonucleoside-diphosphate reductase 2269609 10363960 Psed_2125 Pseudonocardia dioxanivorans CB1190 ribonucleoside-diphosphate reductase YP_004332203.1 2266745 D 675635 CDS YP_004332204.1 331695965 10363961 complement(2269847..2270842) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sma:SAV_1746 hydrolase; alpha/beta hydrolase 2270842 10363961 Psed_2126 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004332204.1 2269847 R 675635 CDS YP_004332205.1 331695966 10363962 2270908..2271414 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: bcv:Bcav_2398 NUDIX hydrolase; NUDIX hydrolase 2271414 10363962 Psed_2127 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004332205.1 2270908 D 675635 CDS YP_004332206.1 331695967 10363964 complement(2272424..2272636) 1 NC_015312.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: mpa:MAP3992 hypothetical protein; excisionase 2272636 10363964 Psed_2129 Pseudonocardia dioxanivorans CB1190 excisionase YP_004332206.1 2272424 R 675635 CDS YP_004332207.1 331695968 10363965 2272846..2273538 1 NC_015312.1 PFAM: Transglutaminase-like; KEGG: mgi:Mflv_4586 hypothetical protein; transglutaminase domain-containing protein 2273538 10363965 Psed_2130 Pseudonocardia dioxanivorans CB1190 transglutaminase domain-containing protein YP_004332207.1 2272846 D 675635 CDS YP_004332208.1 331695969 10363966 2273549..2274628 1 NC_015312.1 KEGG: svi:Svir_08650 Zn-dependent hydrolase, glyoxylase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 2274628 10363966 Psed_2131 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004332208.1 2273549 D 675635 CDS YP_004332209.1 331695970 10363967 2274808..2275296 1 NC_015312.1 KEGG: svi:Svir_10250 hypothetical protein; hypothetical protein 2275296 10363967 Psed_2132 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332209.1 2274808 D 675635 CDS YP_004332210.1 331695971 10363968 2275417..2275971 1 NC_015312.1 KEGG: sen:SACE_1522 hypothetical protein; hypothetical protein 2275971 10363968 Psed_2133 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332210.1 2275417 D 675635 CDS YP_004332211.1 331695972 10363969 complement(2276043..2277287) 1 NC_015312.1 PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: ami:Amir_1324 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; 3-ketoacyl-ACP synthase I 2277287 10363969 Psed_2134 Pseudonocardia dioxanivorans CB1190 3-ketoacyl-ACP synthase I YP_004332211.1 2276043 R 675635 CDS YP_004332212.1 331695973 10363970 complement(2277284..2277526) 1 NC_015312.1 TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: amd:AMED_2100 acyl carrier protein; PFAM: Phosphopantetheine-binding; acyl carrier protein 2277526 10363970 Psed_2135 Pseudonocardia dioxanivorans CB1190 acyl carrier protein YP_004332212.1 2277284 R 675635 CDS YP_004332213.1 331695974 10363971 complement(2277580..2278569) 1 NC_015312.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: svi:Svir_10280 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase 2278569 10363971 Psed_2136 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP synthase YP_004332213.1 2277580 R 675635 CDS YP_004332214.1 331695975 10363972 complement(2278566..2279453) 1 NC_015312.1 PFAM: Acyl transferase; KEGG: rha:RHA1_ro01199 [acyl-carrier protein] S-malonyltransferase; SMART: Polyketide synthase, acyl transferase domain; ACP S-malonyltransferase 2279453 10363972 Psed_2137 Pseudonocardia dioxanivorans CB1190 ACP S-malonyltransferase YP_004332214.1 2278566 R 675635 CDS YP_004332215.1 331695976 10363973 complement(2279684..2281201) 1 NC_015312.1 KEGG: ami:Amir_1328 transcriptional regulator, PucR family; PucR family transcriptional regulator 2281201 10363973 Psed_2138 Pseudonocardia dioxanivorans CB1190 PucR family transcriptional regulator YP_004332215.1 2279684 R 675635 CDS YP_004332216.1 331695977 10363974 2281357..2282124 1 NC_015312.1 PFAM: Pirin, N-terminal; KEGG: req:REQ_42380 pirin-like protein; pirin 2282124 10363974 Psed_2139 Pseudonocardia dioxanivorans CB1190 pirin YP_004332216.1 2281357 D 675635 CDS YP_004332217.1 331695978 10363975 complement(2282250..2282456) 1 NC_015312.1 KEGG: gob:Gobs_1896 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2282456 10363975 Psed_2140 Pseudonocardia dioxanivorans CB1190 cold-shock DNA-binding domain-containing protein YP_004332217.1 2282250 R 675635 CDS YP_004332218.1 331695979 10363976 complement(2282809..2285577) 1 NC_015312.1 KEGG: sen:SACE_1532 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; 2-oxo-acid dehydrogenase E1 2285577 10363976 Psed_2141 Pseudonocardia dioxanivorans CB1190 2-oxo-acid dehydrogenase E1 YP_004332218.1 2282809 R 675635 CDS YP_004332219.1 331695980 10363977 2285783..2286217 1 NC_015312.1 KEGG: ami:Amir_1335 hypothetical protein; hypothetical protein 2286217 10363977 Psed_2142 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332219.1 2285783 D 675635 CDS YP_004332220.1 331695981 10363978 2286348..2286806 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: amd:AMED_2115 alkyl hydroperoxide reductase/thiol specific antioxidant; alkyl hydroperoxide reductase 2286806 10363978 Psed_2143 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004332220.1 2286348 D 675635 CDS YP_004332221.1 331695982 10363980 complement(2287615..2288679) 1 NC_015312.1 PFAM: Aryldialkylphosphatase; KEGG: rer:RER_52720 phosphatase; aryldialkylphosphatase 2288679 10363980 Psed_2144 Pseudonocardia dioxanivorans CB1190 aryldialkylphosphatase YP_004332221.1 2287615 R 675635 CDS YP_004332222.1 331695983 10363981 complement(2289184..2289405) 1 NC_015312.1 hypothetical protein 2289405 10363981 Psed_2145 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332222.1 2289184 R 675635 CDS YP_004332223.1 331695984 10363982 2290170..2291609 1 NC_015312.1 KEGG: hch:HCH_06992 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinamide phosphoribosyltransferase 2291609 10363982 Psed_2146 Pseudonocardia dioxanivorans CB1190 nicotinamide phosphoribosyltransferase YP_004332223.1 2290170 D 675635 CDS YP_004332224.1 331695985 10363983 2291903..2292721 1 NC_015312.1 KEGG: sth:STH658 oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; 2,5-didehydrogluconate reductase 2292721 10363983 Psed_2147 Pseudonocardia dioxanivorans CB1190 2,5-didehydrogluconate reductase YP_004332224.1 2291903 D 675635 CDS YP_004332225.1 331695986 10363984 2292804..2293535 1 NC_015312.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: sma:SAV_4277 hypothetical protein; haloacid dehalogenase 2293535 10363984 Psed_2148 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004332225.1 2292804 D 675635 CDS YP_004332226.1 331695987 10363986 2295073..2295411 1 NC_015312.1 PFAM: NIPSNAP; KEGG: rpx:Rpdx1_2623 NIPSNAP family containing protein; NIPSNAP family containing protein 2295411 10363986 Psed_2150 Pseudonocardia dioxanivorans CB1190 NIPSNAP family containing protein YP_004332226.1 2295073 D 675635 CDS YP_004332227.1 331695988 10363987 2295408..2296409 1 NC_015312.1 TIGRFAM: Quinone oxidoreductase , YhdH/YhfP; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: acr:Acry_2363 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; YhdH/YhfP family quinone oxidoreductase 2296409 10363987 Psed_2151 Pseudonocardia dioxanivorans CB1190 YhdH/YhfP family quinone oxidoreductase YP_004332227.1 2295408 D 675635 CDS YP_004332228.1 331695989 10363988 2296421..2296567 1 NC_015312.1 hypothetical protein 2296567 10363988 Psed_2152 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332228.1 2296421 D 675635 CDS YP_004332229.1 331695990 10363989 2297010..2297357 1 NC_015312.1 PFAM: Domain of unknown function DUF861, cupin-3; KEGG: rop:ROP_54960 hypothetical protein; hypothetical protein 2297357 10363989 Psed_2153 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332229.1 2297010 D 675635 CDS YP_004332230.1 331695991 10363990 2297829..2298725 1 NC_015312.1 KEGG: ade:Adeh_1681 PE-PGRS family protein; PE-PGRS family protein 2298725 10363990 Psed_2154 Pseudonocardia dioxanivorans CB1190 PE-PGRS family protein YP_004332230.1 2297829 D 675635 CDS YP_004332231.1 331695992 10363991 complement(2298671..2299450) 1 NC_015312.1 KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2299450 10363991 Psed_2155 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004332231.1 2298671 R 675635 CDS YP_004332232.1 331695993 10363992 complement(2299447..2300985) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mav:MAV_3533 transposase; integrase catalytic subunit 2300985 10363992 Psed_2156 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004332232.1 2299447 R 675635 CDS YP_004332233.1 331695994 10363993 2301006..2301206 1 NC_015312.1 hypothetical protein 2301206 10363993 Psed_2157 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332233.1 2301006 D 675635 CDS YP_004332234.1 331695995 10363994 2302771..2304225 1 NC_015312.1 KEGG: hch:HCH_06992 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinamide phosphoribosyltransferase 2304225 10363994 Psed_2158 Pseudonocardia dioxanivorans CB1190 nicotinamide phosphoribosyltransferase YP_004332234.1 2302771 D 675635 CDS YP_004332235.1 331695996 10363995 2304306..2305373 1 NC_015312.1 PFAM: Aryldialkylphosphatase; KEGG: rer:RER_52720 phosphatase; aryldialkylphosphatase 2305373 10363995 Psed_2159 Pseudonocardia dioxanivorans CB1190 aryldialkylphosphatase YP_004332235.1 2304306 D 675635 CDS YP_004332236.1 331695997 10363996 2305413..2305754 1 NC_015312.1 PFAM: Domain of unknown function DUF861, cupin-3; KEGG: mkm:Mkms_0992 protein of unknown function DUF861, cupin_3; hypothetical protein 2305754 10363996 Psed_2160 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332236.1 2305413 D 675635 CDS YP_004332237.1 331695998 10363997 2305817..2307304 1 NC_015312.1 PFAM: Aldehyde dehydrogenase domain; KEGG: fri:FraEuI1c_2858 aldehyde dehydrogenase; aldehyde dehydrogenase 2307304 10363997 Psed_2161 Pseudonocardia dioxanivorans CB1190 aldehyde dehydrogenase YP_004332237.1 2305817 D 675635 CDS YP_004332238.1 331695999 10363998 2307440..2308897 1 NC_015312.1 KEGG: fal:FRAAL6082 succinate-semialdehyde dehydrogenase I, NADP-dependent; PFAM: Aldehyde dehydrogenase domain; lactaldehyde dehydrogenase 2308897 10363998 Psed_2162 Pseudonocardia dioxanivorans CB1190 lactaldehyde dehydrogenase YP_004332238.1 2307440 D 675635 CDS YP_004332239.1 331696000 10363999 2308993..2309775 1 NC_015312.1 PFAM: Domain of unknown function DUF1355; KEGG: cdl:CDR20291_0307 hypothetical protein; hypothetical protein 2309775 10363999 Psed_2163 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332239.1 2308993 D 675635 CDS YP_004332240.1 331696001 10364000 2309825..2310859 1 NC_015312.1 KEGG: sth:STH770 LacI family transcriptional repressor; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 2310859 10364000 Psed_2164 Pseudonocardia dioxanivorans CB1190 LacI family transcriptional regulator YP_004332240.1 2309825 D 675635 CDS YP_004332241.1 331696002 10364001 2310856..2311785 1 NC_015312.1 KEGG: ace:Acel_0624 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase; Ribokinase 2311785 10364001 Psed_2165 Pseudonocardia dioxanivorans CB1190 Ribokinase YP_004332241.1 2310856 D 675635 CDS YP_004332242.1 331696003 10364002 2311823..2312815 1 NC_015312.1 TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: cwo:Cwoe_5250 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2312815 10364002 Psed_2166 Pseudonocardia dioxanivorans CB1190 ribose-phosphate pyrophosphokinase YP_004332242.1 2311823 D 675635 CDS YP_004332243.1 331696004 10364003 2312909..2314021 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: sme:SMa0794 monoxygenase; luciferase-like protein 2314021 10364003 Psed_2167 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004332243.1 2312909 D 675635 CDS YP_004332244.1 331696005 10364004 2314127..2315389 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: aba:Acid345_1826 Pro-Hyp dipeptidase; amidohydrolase 2315389 10364004 Psed_2168 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004332244.1 2314127 D 675635 CDS YP_004332245.1 331696006 10364005 2315436..2316260 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: scb:SCAB_77421 hydrolase; alpha/beta hydrolase 2316260 10364005 Psed_2169 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004332245.1 2315436 D 675635 CDS YP_004332246.1 331696007 10364006 2316318..2316830 1 NC_015312.1 KEGG: rha:RHA1_ro11047 oxidoreductase; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 2316830 10364006 Psed_2170 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004332246.1 2316318 D 675635 CDS YP_004332247.1 331696008 10364007 2317045..2317632 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO7518 TetR family transcriptional regulator; TetR family transcriptional regulator 2317632 10364007 Psed_2171 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332247.1 2317045 D 675635 CDS YP_004332248.1 331696009 10364008 complement(2317935..2318561) 1 NC_015312.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: sma:SAV_4277 hypothetical protein; haloacid dehalogenase 2318561 10364008 Psed_2172 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004332248.1 2317935 R 675635 CDS YP_004332249.1 331696010 10364009 complement(2318801..2319127) 1 NC_015312.1 PFAM: NIPSNAP; KEGG: bja:bll4801 hypothetical protein; NIPSNAP family containing protein 2319127 10364009 Psed_2173 Pseudonocardia dioxanivorans CB1190 NIPSNAP family containing protein YP_004332249.1 2318801 R 675635 CDS YP_004332250.1 331696011 10364010 complement(2319124..2320227) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: sme:SMa0794 monoxygenase; luciferase-like protein 2320227 10364010 Psed_2174 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004332250.1 2319124 R 675635 CDS YP_004332251.1 331696012 10364011 complement(2320368..2321360) 1 NC_015312.1 KEGG: ava:Ava_C0148 flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; NADPH dehydrogenase 2321360 10364011 Psed_2175 Pseudonocardia dioxanivorans CB1190 NADPH dehydrogenase YP_004332251.1 2320368 R 675635 CDS YP_004332252.1 331696013 10364013 2322352..2323134 1 NC_015312.1 PFAM: Domain of unknown function DUF1355; KEGG: cdl:CDR20291_0307 hypothetical protein; hypothetical protein 2323134 10364013 Psed_2177 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332252.1 2322352 D 675635 CDS YP_004332253.1 331696014 10364015 complement(2323862..2324446) 1 NC_015312.1 KEGG: afw:Anae109_2601 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 2324446 10364015 Psed_2179 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332253.1 2323862 R 675635 CDS YP_004332254.1 331696015 10364018 complement(2325348..2326808) 1 NC_015312.1 KEGG: hch:HCH_06992 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinamide phosphoribosyltransferase 2326808 10364018 Psed_2182 Pseudonocardia dioxanivorans CB1190 nicotinamide phosphoribosyltransferase YP_004332254.1 2325348 R 675635 CDS YP_004332255.1 331696016 10364021 2328938..2329879 1 NC_015312.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: amd:AMED_1631 purine nucleosidase; inosine/uridine-preferring nucleoside hydrolase 2329879 10364021 Psed_2185 Pseudonocardia dioxanivorans CB1190 inosine/uridine-preferring nucleoside hydrolase YP_004332255.1 2328938 D 675635 CDS YP_004332256.1 331696017 10364023 2332736..2333686 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3740 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2333686 10364023 Psed_2187 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332256.1 2332736 D 675635 CDS YP_004332257.1 331696018 10364024 2333683..2334603 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3739 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2334603 10364024 Psed_2188 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332257.1 2333683 D 675635 CDS YP_004332258.1 331696019 10364025 2334600..2336294 1 NC_015312.1 KEGG: kra:Krad_0942 ABC transporter related; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core; ABC transporter 2336294 10364025 Psed_2189 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332258.1 2334600 D 675635 CDS YP_004332259.1 331696020 10364026 2336291..2337922 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mes:Meso_3737 extracellular solute-binding protein; ABC transporter substrate-binding protein 2337922 10364026 Psed_2190 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332259.1 2336291 D 675635 CDS YP_004332260.1 331696021 10364027 2337967..2340084 1 NC_015312.1 KEGG: mav:MAV_3809 dibenzothiophene desulfurization enzyme A; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Alpha/beta hydrolase fold-1; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 2340084 10364027 Psed_2191 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004332260.1 2337967 D 675635 CDS YP_004332261.1 331696022 10364028 complement(2340171..2340794) 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fal:FRAAL4004 nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase 2340794 10364028 Psed_2192 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004332261.1 2340171 R 675635 CDS YP_004332262.1 331696023 10364029 2340875..2342101 1 NC_015312.1 KEGG: fal:FRAAL2482 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup; alkanesulfonate monooxygenase 2342101 10364029 Psed_2193 Pseudonocardia dioxanivorans CB1190 alkanesulfonate monooxygenase YP_004332262.1 2340875 D 675635 CDS YP_004332263.1 331696024 10364030 2342098..2343306 1 NC_015312.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: fre:Franean1_3756 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase 2343306 10364030 Psed_2194 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004332263.1 2342098 D 675635 CDS YP_004332264.1 331696025 10364031 2343303..2344382 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: ara:Arad_8012 oxidoreductase; luciferase-like protein 2344382 10364031 Psed_2195 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004332264.1 2343303 D 675635 CDS YP_004332265.1 331696026 10364032 complement(2344393..2346651) 1 NC_015312.1 KEGG: bbr:BB1545 biotin sulfoxide reductase; PFAM: Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase; trimethylamine-N-oxide reductase (cytochrome c) 2346651 10364032 Psed_2196 Pseudonocardia dioxanivorans CB1190 trimethylamine-N-oxide reductase (cytochrome c) YP_004332265.1 2344393 R 675635 CDS YP_004332266.1 331696027 10364033 complement(2346844..2347707) 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fri:FraEuI1c_2012 transcriptional regulator, LysR family; LysR family transcriptional regulator 2347707 10364033 Psed_2197 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004332266.1 2346844 R 675635 CDS YP_004332267.1 331696028 10364034 2348125..2348889 1 NC_015312.1 KEGG: fre:Franean1_2021 hypothetical protein; hypothetical protein 2348889 10364034 Psed_2198 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332267.1 2348125 D 675635 CDS YP_004332268.1 331696029 10364035 2348886..2350745 1 NC_015312.1 KEGG: fal:FRAAL3862 thiosulfate sulfurtransferase (partial match); PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; Rhodanese-like; SMART: Rhodanese-like; ketopantoate reductase ApbA/PanE domain-containing protein 2350745 10364035 Psed_2199 Pseudonocardia dioxanivorans CB1190 ketopantoate reductase ApbA/PanE domain-containing protein YP_004332268.1 2348886 D 675635 CDS YP_004332269.1 331696030 10364036 2350747..2351835 1 NC_015312.1 KEGG: fal:FRAAL3868 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 2351835 10364036 Psed_2200 Pseudonocardia dioxanivorans CB1190 alkanesulfonate monooxygenase YP_004332269.1 2350747 D 675635 CDS YP_004332270.1 331696031 10364037 2351832..2353166 1 NC_015312.1 KEGG: fal:FRAAL3861 glycolate oxidoreductase (partial match); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 2353166 10364037 Psed_2201 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase YP_004332270.1 2351832 D 675635 CDS YP_004332271.1 331696032 10364038 2353169..2353501 1 NC_015312.1 PFAM: Class II aldolase/adducin, N-terminal; KEGG: stp:Strop_2788 hypothetical protein; class II aldolase/adducin family protein 2353501 10364038 Psed_2202 Pseudonocardia dioxanivorans CB1190 class II aldolase/adducin family protein YP_004332271.1 2353169 D 675635 CDS YP_004332272.1 331696033 10364039 complement(2353856..2355208) 1 NC_015312.1 KEGG: sen:SACE_0755 cobalamin synthesis CobW-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; cobalamin synthesis cobW domain-containing protein 2355208 10364039 Psed_2203 Pseudonocardia dioxanivorans CB1190 cobalamin synthesis cobW domain-containing protein YP_004332272.1 2353856 R 675635 CDS YP_004332273.1 331696034 10364040 2355295..2355456 1 NC_015312.1 TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: mab:MAB_0333c 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 2355456 10364040 Psed_2204 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L33 YP_004332273.1 2355295 D 675635 CDS YP_004332274.1 331696035 10364041 complement(2355614..2356498) 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 2356498 10364041 Psed_2205 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004332274.1 2355614 R 675635 CDS YP_004332275.1 331696036 10364042 2356699..2357136 1 NC_015312.1 hypothetical protein 2357136 10364042 Psed_2206 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332275.1 2356699 D 675635 CDS YP_004332276.1 331696037 10364043 2357563..2358303 1 NC_015312.1 PFAM: Protein of unknown function DUF1345; KEGG: rer:RER_34620 hypothetical protein; hypothetical protein 2358303 10364043 Psed_2207 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332276.1 2357563 D 675635 CDS YP_004332277.1 331696038 10364044 2358853..2359293 1 NC_015312.1 KEGG: scb:SCAB_84581 hypothetical protein; hypothetical protein 2359293 10364044 Psed_2208 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332277.1 2358853 D 675635 CDS YP_004332278.1 331696039 10364045 2359295..2361178 1 NC_015312.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: sma:SAV_7237 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 2361178 10364045 Psed_2209 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaK YP_004332278.1 2359295 D 675635 CDS YP_004332279.1 331696040 10364046 2361188..2361781 1 NC_015312.1 KEGG: sma:SAV_7238 GrpE homologue; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE 2361781 10364046 Psed_2210 Pseudonocardia dioxanivorans CB1190 protein grpE YP_004332279.1 2361188 D 675635 CDS YP_004332280.1 331696041 10364047 2361785..2362771 1 NC_015312.1 KEGG: sma:SAV_7239 heat shock protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 2362771 10364047 Psed_2211 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaJ YP_004332280.1 2361785 D 675635 CDS YP_004332281.1 331696042 10364048 2362768..2363160 1 NC_015312.1 KEGG: sro:Sros_4025 hypothetical protein; hypothetical protein 2363160 10364048 Psed_2212 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332281.1 2362768 D 675635 CDS YP_004332282.1 331696043 10364049 2363151..2365775 1 NC_015312.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sma:SAV_7241 ATP-dependent Clp protease; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 2365775 10364049 Psed_2213 Pseudonocardia dioxanivorans CB1190 ATP-dependent chaperone ClpB YP_004332282.1 2363151 D 675635 CDS YP_004332283.1 331696044 10364050 2365772..2366236 1 NC_015312.1 KEGG: rha:RHA1_ro06703 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 2366236 10364050 Psed_2214 Pseudonocardia dioxanivorans CB1190 thioredoxin YP_004332283.1 2365772 D 675635 CDS YP_004332284.1 331696045 10364051 2366233..2366505 1 NC_015312.1 KEGG: fri:FraEuI1c_6454 hypothetical protein; hypothetical protein 2366505 10364051 Psed_2215 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332284.1 2366233 D 675635 CDS YP_004332285.1 331696046 10364052 2366502..2368220 1 NC_015312.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Cyclic nucleotide-binding domain; KEGG: sma:SAV_7243 thioredoxin reductase; SMART: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 2368220 10364052 Psed_2216 Pseudonocardia dioxanivorans CB1190 cyclic nucleotide-binding protein YP_004332285.1 2366502 D 675635 CDS YP_004332286.1 331696047 10364053 complement(2368544..2369563) 1 NC_015312.1 KEGG: scb:SCAB_8981 LuxR family regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2369563 10364053 Psed_2217 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332286.1 2368544 R 675635 CDS YP_004332287.1 331696048 10364056 2370877..2373300 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: nfa:pnf1280 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 2373300 10364056 Psed_2220 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004332287.1 2370877 D 675635 CDS YP_004332288.1 331696049 10364057 complement(2373380..2373778) 1 NC_015312.1 hypothetical protein 2373778 10364057 Psed_2221 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332288.1 2373380 R 675635 CDS YP_004332289.1 331696050 10364058 2374030..2375286 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bcv:Bcav_0861 major facilitator superfamily MFS_1; major facilitator superfamily protein 2375286 10364058 Psed_2222 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332289.1 2374030 D 675635 CDS YP_004332290.1 331696051 10364059 2375525..2376385 1 NC_015312.1 KEGG: svi:Svir_05780 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein; MIP family channel protein 2376385 10364059 Psed_2223 Pseudonocardia dioxanivorans CB1190 MIP family channel protein YP_004332290.1 2375525 D 675635 CDS YP_004332291.1 331696052 10364060 complement(2376391..2377473) 1 NC_015312.1 KEGG: rha:RHA1_ro02996 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase 2377473 10364060 Psed_2224 Pseudonocardia dioxanivorans CB1190 maleylacetate reductase YP_004332291.1 2376391 R 675635 CDS YP_004332292.1 331696053 10364061 complement(2377470..2378420) 1 NC_015312.1 KEGG: rha:RHA1_ro08511 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase 2378420 10364061 Psed_2225 Pseudonocardia dioxanivorans CB1190 hydroxyquinol 1,2-dioxygenase YP_004332292.1 2377470 R 675635 CDS YP_004332293.1 331696054 10364062 complement(2378522..2380795) 1 NC_015312.1 KEGG: nml:Namu_2880 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2380795 10364062 Psed_2226 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332293.1 2378522 R 675635 CDS YP_004332294.1 331696055 10364063 2380938..2382461 1 NC_015312.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: reu:Reut_A1585 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 2382461 10364063 Psed_2227 Pseudonocardia dioxanivorans CB1190 4-hydroxyphenylacetate 3-hydroxylase YP_004332294.1 2380938 D 675635 CDS YP_004332295.1 331696056 10364064 complement(2382464..2384455) 1 NC_015312.1 KEGG: msm:MSMEG_4430 transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2384455 10364064 Psed_2228 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332295.1 2382464 R 675635 CDS YP_004332296.1 331696057 10364065 complement(2384459..2384941) 1 NC_015312.1 KEGG: cwo:Cwoe_0945 flavin reductase domain protein FMN-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 2384941 10364065 Psed_2229 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004332296.1 2384459 R 675635 CDS YP_004332297.1 331696058 10364066 2385130..2385519 1 NC_015312.1 PFAM: YCII-related; KEGG: mmi:MMAR_4112 hypothetical protein; hypothetical protein 2385519 10364066 Psed_2230 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332297.1 2385130 D 675635 CDS YP_004332298.1 331696059 10364067 2385563..2386096 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: sgr:SGR_824 hypothetical protein; DoxX family protein 2386096 10364067 Psed_2231 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004332298.1 2385563 D 675635 CDS YP_004332299.1 331696060 10364068 complement(2386181..2387029) 1 NC_015312.1 KEGG: fal:FRAAL2457 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2387029 10364068 Psed_2232 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332299.1 2386181 R 675635 CDS YP_004332300.1 331696061 10364069 complement(2387061..2388704) 1 NC_015312.1 KEGG: pol:Bpro_5565 flavin-containing monooxygenase FMO; cyclohexanone monooxygenase 2388704 10364069 Psed_2233 Pseudonocardia dioxanivorans CB1190 cyclohexanone monooxygenase YP_004332300.1 2387061 R 675635 CDS YP_004332301.1 331696062 10364070 2388832..2389974 1 NC_015312.1 KEGG: rpa:RPA3462 thiolase; thiolase 2389974 10364070 Psed_2234 Pseudonocardia dioxanivorans CB1190 thiolase YP_004332301.1 2388832 D 675635 CDS YP_004332302.1 331696063 10364071 2389971..2390291 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: bja:blr3928 hypothetical protein; hypothetical protein 2390291 10364071 Psed_2235 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332302.1 2389971 D 675635 CDS YP_004332303.1 331696064 10364072 2390288..2392402 1 NC_015312.1 KEGG: rpd:RPD_3312 CoA-binding; PFAM: CoA-binding; SMART: CoA-binding; CoA-binding domain-containing protein 2392402 10364072 Psed_2236 Pseudonocardia dioxanivorans CB1190 CoA-binding domain-containing protein YP_004332303.1 2390288 D 675635 CDS YP_004332304.1 331696065 10364073 2392422..2393423 1 NC_015312.1 KEGG: rha:RHA1_ro06956 hypothetical protein; hypothetical protein 2393423 10364073 Psed_2237 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332304.1 2392422 D 675635 CDS YP_004332305.1 331696066 10364074 complement(2393570..2394397) 1 NC_015312.1 KEGG: svi:Svir_24560 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 2394397 10364074 Psed_2238 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004332305.1 2393570 R 675635 CDS YP_004332306.1 331696067 10364075 complement(2394423..2395256) 1 NC_015312.1 KEGG: nml:Namu_2352 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2395256 10364075 Psed_2239 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332306.1 2394423 R 675635 CDS YP_004332307.1 331696068 10364076 complement(2395264..2395659) 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: mjl:Mjls_3367 hypothetical protein; hypothetical protein 2395659 10364076 Psed_2240 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332307.1 2395264 R 675635 CDS YP_004332308.1 331696069 10364077 complement(2395781..2395951) 1 NC_015312.1 hypothetical protein 2395951 10364077 Psed_2241 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332308.1 2395781 R 675635 CDS YP_004332309.1 331696070 10364078 2396409..2397197 1 NC_015312.1 KEGG: bts:Btus_1282 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 2397197 10364078 Psed_2242 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004332309.1 2396409 D 675635 CDS YP_004332310.1 331696071 10364079 complement(2397279..2397872) 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpt:Mpe_A2657 hypothetical protein; carboxymuconolactone decarboxylase 2397872 10364079 Psed_2243 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004332310.1 2397279 R 675635 CDS YP_004332311.1 331696072 10364080 2398394..2399581 1 NC_015312.1 PFAM: Peptidase M24, structural domain; Creatinase; KEGG: sme:SMa1329 peptidase; peptidase M24 2399581 10364080 Psed_2244 Pseudonocardia dioxanivorans CB1190 peptidase M24 YP_004332311.1 2398394 D 675635 CDS YP_004332312.1 331696073 10364081 2399782..2401539 1 NC_015312.1 PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: rop:ROP_46620 Fis family transcriptional regulator; Fis family transcriptional regulator 2401539 10364081 Psed_2245 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004332312.1 2399782 D 675635 CDS YP_004332313.1 331696074 10364082 2401619..2402320 1 NC_015312.1 KEGG: art:Arth_3959 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2402320 10364082 Psed_2246 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332313.1 2401619 D 675635 CDS YP_004332314.1 331696075 10364083 complement(2402410..2403276) 1 NC_015312.1 KEGG: fre:Franean1_4489 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2403276 10364083 Psed_2247 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332314.1 2402410 R 675635 CDS YP_004332315.1 331696076 10364084 complement(2403278..2403643) 1 NC_015312.1 KEGG: tcu:Tcur_4169 hypothetical protein; hypothetical protein 2403643 10364084 Psed_2248 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332315.1 2403278 R 675635 CDS YP_004332316.1 331696077 10364085 complement(2403758..2404699) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sen:SACE_7338 zinc-binding oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 2404699 10364085 Psed_2249 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004332316.1 2403758 R 675635 CDS YP_004332317.1 331696078 10364086 2404866..2405777 1 NC_015312.1 manually curated; KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 2405777 10364086 Psed_2250 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332317.1 2404866 D 675635 CDS YP_004332318.1 331696079 10364087 2405774..2406316 1 NC_015312.1 KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 2406316 10364087 Psed_2251 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332318.1 2405774 D 675635 CDS YP_004332319.1 331696080 10364088 2406316..2408784 1 NC_015312.1 KEGG: sti:Sthe_2310 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 2408784 10364088 Psed_2252 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332319.1 2406316 D 675635 CDS YP_004332320.1 331696081 10364089 2408781..2409545 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_0332 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2409545 10364089 Psed_2253 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004332320.1 2408781 D 675635 CDS YP_004332321.1 331696082 10364090 2409542..2410720 1 NC_015312.1 KEGG: nml:Namu_3427 epoxide hydrolase domain-containing protein; PFAM: Epoxide hydrolase, N-terminal; Alpha/beta hydrolase fold-1; microsomal epoxide hydrolase 2410720 10364090 Psed_2254 Pseudonocardia dioxanivorans CB1190 microsomal epoxide hydrolase YP_004332321.1 2409542 D 675635 CDS YP_004332322.1 331696083 10364091 2410717..2411631 1 NC_015312.1 PFAM: ATPase, AAA-5; KEGG: nml:Namu_2354 ATPase; ATPase 2411631 10364091 Psed_2255 Pseudonocardia dioxanivorans CB1190 ATPase YP_004332322.1 2410717 D 675635 CDS YP_004332323.1 331696084 10364092 2411658..2412620 1 NC_015312.1 KEGG: nml:Namu_2355 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 2412620 10364092 Psed_2256 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004332323.1 2411658 D 675635 CDS YP_004332324.1 331696085 10364093 2412737..2413579 1 NC_015312.1 KEGG: rop:ROP_46670 carveol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2413579 10364093 Psed_2257 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332324.1 2412737 D 675635 CDS YP_004332325.1 331696086 10364094 2413728..2414855 1 NC_015312.1 KEGG: rop:ROP_31020 hypothetical protein; hypothetical protein 2414855 10364094 Psed_2258 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332325.1 2413728 D 675635 CDS YP_004332326.1 331696087 10364095 2414848..2417331 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter permease; KEGG: cwo:Cwoe_3938 ABC transporter related protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 2417331 10364095 Psed_2259 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004332326.1 2414848 D 675635 CDS YP_004332327.1 331696088 10364096 2417348..2418358 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: rop:ROP_31040 ABC transporter permease; ABC transporter permease 2418358 10364096 Psed_2260 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332327.1 2417348 D 675635 CDS YP_004332328.1 331696089 10364097 2418355..2419146 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro08833 epoxide hydrolase; alpha/beta hydrolase 2419146 10364097 Psed_2261 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004332328.1 2418355 D 675635 CDS YP_004332329.1 331696090 10364098 2419136..2419900 1 NC_015312.1 PFAM: Aldehyde-lyase domain; KEGG: rop:ROP_33640 oxidoreductase/aldolase; HpcH/HpaI aldolase 2419900 10364098 Psed_2262 Pseudonocardia dioxanivorans CB1190 HpcH/HpaI aldolase YP_004332329.1 2419136 D 675635 CDS YP_004332330.1 331696091 10364099 2420015..2421166 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: rxy:Rxyl_2379 zinc-binding alcohol dehydrogenase; alcohol dehydrogenase 2421166 10364099 Psed_2263 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004332330.1 2420015 D 675635 CDS YP_004332331.1 331696092 10364100 2421337..2422197 1 NC_015312.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: swi:Swit_3304 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 2422197 10364100 Psed_2264 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004332331.1 2421337 D 675635 CDS YP_004332332.1 331696093 10364101 2422335..2423453 1 NC_015312.1 KEGG: rop:ROP_31020 hypothetical protein; hypothetical protein 2423453 10364101 Psed_2265 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332332.1 2422335 D 675635 CDS YP_004332333.1 331696094 10364102 complement(2423634..2424485) 1 NC_015312.1 KEGG: rha:RHA1_ro08833 epoxide hydrolase; manually curated; PFAM: Alpha/beta hydrolase fold-1; alpha/beta hydrolase 2424485 10364102 Psed_2266 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004332333.1 2423634 R 675635 CDS YP_004332334.1 331696095 10364103 2424675..2425082 1 NC_015312.1 KEGG: fra:Francci3_2500 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 2425082 10364103 Psed_2267 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004332334.1 2424675 D 675635 CDS YP_004332335.1 331696096 10364104 2425079..2426887 1 NC_015312.1 PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; KEGG: amd:AMED_5732 transport integral membrane protein; Cl- channel voltage-gated family protein 2426887 10364104 Psed_2268 Pseudonocardia dioxanivorans CB1190 Cl- channel voltage-gated family protein YP_004332335.1 2425079 D 675635 CDS YP_004332336.1 331696097 10364105 complement(2426835..2427875) 1 NC_015312.1 KEGG: fre:Franean1_1870 helix-turn-helix type 11 domain-containing protein; helix-turn-helix type 11 domain-containing protein 2427875 10364105 Psed_2269 Pseudonocardia dioxanivorans CB1190 helix-turn-helix type 11 domain-containing protein YP_004332336.1 2426835 R 675635 CDS YP_004332337.1 331696098 10364106 2427981..2428397 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mav:MAV_1244 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 2428397 10364106 Psed_2270 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004332337.1 2427981 D 675635 CDS YP_004332338.1 331696099 10364107 complement(2428402..2429763) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: fri:FraEuI1c_3931 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2429763 10364107 Psed_2271 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004332338.1 2428402 R 675635 CDS YP_004332339.1 331696100 10364108 complement(2429982..2431085) 1 NC_015312.1 KEGG: azc:AZC_1411 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase 2431085 10364108 Psed_2272 Pseudonocardia dioxanivorans CB1190 maleylacetate reductase YP_004332339.1 2429982 R 675635 CDS YP_004332340.1 331696101 10364109 complement(2431160..2431285) 1 NC_015312.1 PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2431285 10364109 Psed_2273 Pseudonocardia dioxanivorans CB1190 4-oxalocrotonate tautomerase YP_004332340.1 2431160 R 675635 CDS YP_004332341.1 331696102 10364110 complement(2431285..2432079) 1 NC_015312.1 KEGG: ava:Ava_4328 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2432079 10364110 Psed_2274 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332341.1 2431285 R 675635 CDS YP_004332342.1 331696103 10364111 2432243..2432974 1 NC_015312.1 KEGG: cwo:Cwoe_3227 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; FAD synthetase 2432974 10364111 Psed_2275 Pseudonocardia dioxanivorans CB1190 FAD synthetase YP_004332342.1 2432243 D 675635 CDS YP_004332343.1 331696104 10364112 2433073..2436111 1 NC_015312.1 PFAM: Signal transduction response regulator, C-terminal; Bacterial transcriptional activator domain; KEGG: ach:Achl_4571 transcriptional activator domain protein; transcriptional regulator domain-containing protein 2436111 10364112 Psed_2276 Pseudonocardia dioxanivorans CB1190 transcriptional regulator domain-containing protein YP_004332343.1 2433073 D 675635 CDS YP_004332344.1 331696105 10364113 2436194..2436745 1 NC_015312.1 KEGG: ach:Achl_4570 flavin reductase domain protein FMN-binding; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 2436745 10364113 Psed_2277 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004332344.1 2436194 D 675635 CDS YP_004332345.1 331696106 10364114 2436768..2438108 1 NC_015312.1 KEGG: bch:Bcen2424_5833 ATP-dependent transcription regulator LuxR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2438108 10364114 Psed_2278 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332345.1 2436768 D 675635 CDS YP_004332346.1 331696107 10364115 complement(2438069..2439730) 1 NC_015312.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: reu:Reut_A1585 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 2439730 10364115 Psed_2279 Pseudonocardia dioxanivorans CB1190 4-hydroxyphenylacetate 3-hydroxylase YP_004332346.1 2438069 R 675635 CDS YP_004332347.1 331696108 10364116 2439754..2440578 1 NC_015312.1 KEGG: rpa:RPA2149 hydroxyquinol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase 2440578 10364116 Psed_2280 Pseudonocardia dioxanivorans CB1190 hydroxyquinol 1,2-dioxygenase YP_004332347.1 2439754 D 675635 CDS YP_004332348.1 331696109 10364117 complement(2440672..2441430) 1 NC_015312.1 KEGG: rop:ROP_11540 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2441430 10364117 Psed_2281 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332348.1 2440672 R 675635 CDS YP_004332349.1 331696110 10364118 2441593..2442873 1 NC_015312.1 PFAM: O-acyltransferase, WSD1, N-terminal; KEGG: nml:Namu_4293 hypothetical protein; hypothetical protein 2442873 10364118 Psed_2282 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332349.1 2441593 D 675635 CDS YP_004332350.1 331696111 10364119 complement(2442910..2443692) 1 NC_015312.1 PFAM: UspA; KEGG: sen:SACE_2444 universal stress protein; UspA domain-containing protein 2443692 10364119 Psed_2283 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004332350.1 2442910 R 675635 CDS YP_004332351.1 331696112 10364120 2444025..2444492 1 NC_015312.1 KEGG: amd:AMED_5479 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein 2444492 10364120 Psed_2284 Pseudonocardia dioxanivorans CB1190 signal transduction protein YP_004332351.1 2444025 D 675635 CDS YP_004332352.1 331696113 10364122 2445237..2446787 1 NC_015312.1 KEGG: gob:Gobs_3546 transmembrane protein; hypothetical protein 2446787 10364122 Psed_2286 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332352.1 2445237 D 675635 CDS YP_004332353.1 331696114 10364123 2446784..2447038 1 NC_015312.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: mgi:Mflv_5393 hypothetical protein; hypothetical protein 2447038 10364123 Psed_2287 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332353.1 2446784 D 675635 CDS YP_004332354.1 331696115 10364124 complement(2447159..2447359) 1 NC_015312.1 hypothetical protein 2447359 10364124 Psed_2288 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332354.1 2447159 R 675635 CDS YP_004332355.1 331696116 10364125 2447604..2447864 1 NC_015312.1 hypothetical protein 2447864 10364125 Psed_2289 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332355.1 2447604 D 675635 CDS YP_004332356.1 331696117 10364126 2448016..2448831 1 NC_015312.1 KEGG: ami:Amir_2412 hypothetical protein; hypothetical protein 2448831 10364126 Psed_2290 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332356.1 2448016 D 675635 CDS YP_004332357.1 331696118 10364127 2448988..2449410 1 NC_015312.1 KEGG: tcu:Tcur_0499 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 2449410 10364127 Psed_2291 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004332357.1 2448988 D 675635 CDS YP_004332358.1 331696119 10364128 complement(2449506..2450150) 1 NC_015312.1 KEGG: ami:Amir_6098 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2450150 10364128 Psed_2292 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332358.1 2449506 R 675635 CDS YP_004332359.1 331696120 10364129 2450380..2450772 1 NC_015312.1 KEGG: cai:Caci_2703 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 2450772 10364129 Psed_2293 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaJ YP_004332359.1 2450380 D 675635 CDS YP_004332360.1 331696121 10364130 2450914..2451447 1 NC_015312.1 KEGG: sti:Sthe_0758 hypothetical protein; hypothetical protein 2451447 10364130 Psed_2294 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332360.1 2450914 D 675635 CDS YP_004332361.1 331696122 10364131 complement(2451512..2451697) 1 NC_015312.1 PFAM: Domain of unknown function DUF1918; KEGG: sen:SACE_2460 hypothetical protein; hypothetical protein 2451697 10364131 Psed_2295 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332361.1 2451512 R 675635 CDS YP_004332362.1 331696123 10364132 2451929..2452396 1 NC_015312.1 KEGG: nml:Namu_1797 hypothetical protein; hypothetical protein 2452396 10364132 Psed_2296 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332362.1 2451929 D 675635 CDS YP_004332363.1 331696124 10364133 2452393..2453052 1 NC_015312.1 KEGG: nml:Namu_2007 hypothetical protein; hypothetical protein 2453052 10364133 Psed_2297 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332363.1 2452393 D 675635 CDS YP_004332364.1 331696125 10364134 2453334..2454227 1 NC_015312.1 PFAM: UspA; KEGG: amd:AMED_5478 universal stress protein; UspA domain-containing protein 2454227 10364134 Psed_2298 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004332364.1 2453334 D 675635 CDS YP_004332365.1 331696126 10364135 2454365..2454766 1 NC_015312.1 KEGG: sro:Sros_4105 hypothetical protein; hypothetical protein 2454766 10364135 Psed_2299 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332365.1 2454365 D 675635 CDS YP_004332366.1 331696127 10364136 complement(2454796..2455554) 1 NC_015312.1 KEGG: kfl:Kfla_0222 hypothetical protein; hypothetical protein 2455554 10364136 Psed_2300 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332366.1 2454796 R 675635 CDS YP_004332367.1 331696128 10364137 2455842..2456504 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0126; KEGG: mgi:Mflv_0991 hypothetical protein; hypothetical protein 2456504 10364137 Psed_2301 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332367.1 2455842 D 675635 CDS YP_004332368.1 331696129 10364138 complement(2456549..2457064) 1 NC_015312.1 hypothetical protein 2457064 10364138 Psed_2302 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332368.1 2456549 R 675635 CDS YP_004332369.1 331696130 10364139 complement(2457278..2458615) 1 NC_015312.1 PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; KEGG: svi:Svir_32600 glutamate dehydrogenase; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; glutamate dehydrogenase 2458615 10364139 Psed_2303 Pseudonocardia dioxanivorans CB1190 glutamate dehydrogenase YP_004332369.1 2457278 R 675635 CDS YP_004332370.1 331696131 10364140 complement(2458766..2459263) 1 NC_015312.1 KEGG: bid:Bind_1827 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 2459263 10364140 Psed_2304 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004332370.1 2458766 R 675635 CDS YP_004332371.1 331696132 10364141 complement(2459495..2460244) 1 NC_015312.1 hypothetical protein 2460244 10364141 Psed_2305 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332371.1 2459495 R 675635 CDS YP_004332372.1 331696133 10364142 complement(2460307..2460816) 1 NC_015312.1 PFAM: Transcription elongation factor, GreA/GreB, C-terminal; KEGG: svi:Svir_31810 transcription elongation factor GreA; GreA/GreB family elongation factor 2460816 10364142 Psed_2306 Pseudonocardia dioxanivorans CB1190 GreA/GreB family elongation factor YP_004332372.1 2460307 R 675635 CDS YP_004332373.1 331696134 10364143 complement(2461332..2461820) 1 NC_015312.1 KEGG: rha:RHA1_ro08274 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 2461820 10364143 Psed_2307 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004332373.1 2461332 R 675635 CDS YP_004332374.1 331696135 10364144 complement(2461884..2463572) 1 NC_015312.1 KEGG: tcu:Tcur_1126 response regulator receiver modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; SMART: Signal transduction response regulator, receiver domain; Protein phosphatase 2C-like; response regulator receiver modulated serine phosphatase 2463572 10364144 Psed_2308 Pseudonocardia dioxanivorans CB1190 response regulator receiver modulated serine phosphatase YP_004332374.1 2461884 R 675635 CDS YP_004332375.1 331696136 10364146 2464307..2464675 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: saq:Sare_2243 anti-sigma-factor antagonist; sulfate transporter/antisigma-factor antagonist STAS 2464675 10364146 Psed_2310 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004332375.1 2464307 D 675635 CDS YP_004332376.1 331696137 10364147 2464737..2465795 1 NC_015312.1 KEGG: amd:AMED_4131 chemotaxis-specific methylesterase CheB; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; chemotaxis protein CheB 2465795 10364147 Psed_2311 Pseudonocardia dioxanivorans CB1190 chemotaxis protein CheB YP_004332376.1 2464737 D 675635 CDS YP_004332377.1 331696138 10364148 2465852..2467690 1 NC_015312.1 SMART: MCP methyltransferase, CheR-type; PAS; TIGRFAM: PAS; KEGG: amd:AMED_4133 chemotaxis protein methyltransferase CheR; PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; PAS fold-4; PAS fold; chemotaxis protein CheR 2467690 10364148 Psed_2312 Pseudonocardia dioxanivorans CB1190 chemotaxis protein CheR YP_004332377.1 2465852 D 675635 CDS YP_004332378.1 331696139 10364149 2467727..2468116 1 NC_015312.1 hypothetical protein 2468116 10364149 Psed_2313 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332378.1 2467727 D 675635 CDS YP_004332379.1 331696140 10364150 2468227..2468952 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: ami:Amir_1818 signal transduction histidine kinase; ATP-binding protein 2468952 10364150 Psed_2314 Pseudonocardia dioxanivorans CB1190 ATP-binding protein YP_004332379.1 2468227 D 675635 CDS YP_004332380.1 331696141 10364152 complement(2470833..2471345) 1 NC_015312.1 KEGG: amd:AMED_4134 hypothetical protein; hypothetical protein 2471345 10364152 Psed_2316 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332380.1 2470833 R 675635 CDS YP_004332381.1 331696142 10364153 complement(2471396..2471494) 1 NC_015312.1 hypothetical protein 2471494 10364153 Psed_2317 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332381.1 2471396 R 675635 CDS YP_004332382.1 331696143 10364154 2471580..2472116 1 NC_015312.1 KEGG: gob:Gobs_3601 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 2472116 10364154 Psed_2318 Pseudonocardia dioxanivorans CB1190 regulatory protein MerR YP_004332382.1 2471580 D 675635 CDS YP_004332383.1 331696144 10364156 2473066..2473272 1 NC_015312.1 hypothetical protein 2473272 10364156 Psed_2320 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332383.1 2473066 D 675635 CDS YP_004332384.1 331696145 10364157 2473340..2474527 1 NC_015312.1 KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein 2474527 10364157 Psed_2321 Pseudonocardia dioxanivorans CB1190 sugar ABC transporter substrate-binding protein YP_004332384.1 2473340 D 675635 CDS YP_004332385.1 331696146 10364158 2474619..2475863 1 NC_015312.1 KEGG: bxe:Bxe_A2358 hypothetical protein; PFAM: CoA-transferase III; formyl-CoA transferase 2475863 10364158 Psed_2322 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004332385.1 2474619 D 675635 CDS YP_004332386.1 331696147 10364159 complement(2475913..2476554) 1 NC_015312.1 KEGG: rxy:Rxyl_0276 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 2476554 10364159 Psed_2323 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004332386.1 2475913 R 675635 CDS YP_004332387.1 331696148 10364160 complement(2476694..2482273) 1 NC_015312.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; Signal transduction response regulator, receiver domain; PAS fold-3; GAF; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: gob:Gobs_0116 multi-sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAC motif; Signal transduction response regulator, receiver domain; Protein phosphatase 2C-like; multi-sensor signal transduction histidine kinase 2482273 10364160 Psed_2324 Pseudonocardia dioxanivorans CB1190 multi-sensor signal transduction histidine kinase YP_004332387.1 2476694 R 675635 CDS YP_004332388.1 331696149 10364161 complement(2482633..2483439) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: mta:Moth_1861 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 2483439 10364161 Psed_2325 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004332388.1 2482633 R 675635 CDS YP_004332389.1 331696150 10364162 complement(2483426..2484376) 1 NC_015312.1 KEGG: mta:Moth_1862 cobalt ABC transporter CbiQ, permease subunit; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 2484376 10364162 Psed_2326 Pseudonocardia dioxanivorans CB1190 cobalt ABC transporter inner membrane subunit CbiQ YP_004332389.1 2483426 R 675635 CDS YP_004332390.1 331696151 10364163 complement(2484373..2485482) 1 NC_015312.1 PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: mta:Moth_1863 cobalt transport protein CbiM; cobalamin (vitamin B12) biosynthesis protein CbiM 2485482 10364163 Psed_2327 Pseudonocardia dioxanivorans CB1190 cobalamin (vitamin B12) biosynthesis protein CbiM YP_004332390.1 2484373 R 675635 CDS YP_004332391.1 331696152 10364164 2485836..2486957 1 NC_015312.1 KEGG: amd:AMED_8813 high-affinity nickel-transport protein; TIGRFAM: Nickel/cobalt transporter, high-affinity, bacteria; PFAM: Nickel/cobalt transporter, high-affinity; high-affinity nickel-transporter 2486957 10364164 Psed_2328 Pseudonocardia dioxanivorans CB1190 high-affinity nickel-transporter YP_004332391.1 2485836 D 675635 CDS YP_004332392.1 331696153 10364165 2487119..2487757 1 NC_015312.1 KEGG: sno:Snov_0060 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; peroxidase 2487757 10364165 Psed_2329 Pseudonocardia dioxanivorans CB1190 peroxidase YP_004332392.1 2487119 D 675635 CDS YP_004332393.1 331696154 10364166 2487918..2488805 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: msm:MSMEG_3416 protein of unknown function DUF6, transmembrane; hypothetical protein 2488805 10364166 Psed_2330 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332393.1 2487918 D 675635 CDS YP_004332394.1 331696155 10364167 complement(2488829..2489734) 1 NC_015312.1 KEGG: mil:ML5_4930 carbohydrate kinase, yjef related protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; PFAM: Uncharacterised protein family, carbohydrate kinase-related; hypothetical protein 2489734 10364167 Psed_2331 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332394.1 2488829 R 675635 CDS YP_004332395.1 331696156 10364168 complement(2489712..2490485) 1 NC_015312.1 KEGG: mau:Micau_3460 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 2490485 10364168 Psed_2332 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004332395.1 2489712 R 675635 CDS YP_004332396.1 331696157 10364169 complement(2490449..2491300) 1 NC_015312.1 KEGG: gbr:Gbro_0721 glycosyltransferase-like protein; glycosyltransferase-like protein 2491300 10364169 Psed_2333 Pseudonocardia dioxanivorans CB1190 glycosyltransferase-like protein YP_004332396.1 2490449 R 675635 CDS YP_004332397.1 331696158 10364170 complement(2491285..2492361) 1 NC_015312.1 PFAM: Glycosyl transferase, family 28, C-terminal; KEGG: req:REQ_26890 hypothetical protein; glycosyl transferase protein 2492361 10364170 Psed_2334 Pseudonocardia dioxanivorans CB1190 glycosyl transferase protein YP_004332397.1 2491285 R 675635 CDS YP_004332398.1 331696159 10364171 complement(2492358..2493434) 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: rha:RHA1_ro00092 glycosyltransferase; group 1 glycosyl transferase 2493434 10364171 Psed_2335 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004332398.1 2492358 R 675635 CDS YP_004332399.1 331696160 10364172 complement(2493431..2494546) 1 NC_015312.1 KEGG: gbr:Gbro_0724 hypothetical protein; hypothetical protein 2494546 10364172 Psed_2336 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332399.1 2493431 R 675635 CDS YP_004332400.1 331696161 10364173 complement(2494664..2495716) 1 NC_015312.1 KEGG: gob:Gobs_3356 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease BN 2495716 10364173 Psed_2337 Pseudonocardia dioxanivorans CB1190 ribonuclease BN YP_004332400.1 2494664 R 675635 CDS YP_004332401.1 331696162 10364174 complement(2496002..2496745) 1 NC_015312.1 PFAM: ANTAR; KEGG: sen:SACE_1903 response regulator receiver/ANTAR domain-containing protein; ANTAR domain-containing protein 2496745 10364174 Psed_2338 Pseudonocardia dioxanivorans CB1190 ANTAR domain-containing protein YP_004332401.1 2496002 R 675635 CDS YP_004332402.1 331696163 10364175 2496950..2497069 1 NC_015312.1 hypothetical protein 2497069 10364175 Psed_2339 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332402.1 2496950 D 675635 CDS YP_004332403.1 331696164 10364176 complement(2497227..2497430) 1 NC_015312.1 hypothetical protein 2497430 10364176 Psed_2340 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332403.1 2497227 R 675635 CDS YP_004332404.1 331696165 10364177 complement(2497473..2498552) 1 NC_015312.1 PFAM: Mg2+ transporter protein, CorA-like; KEGG: amd:AMED_4525 CorA-like magnesium transport protein; Mg2 transporter protein CorA family protein 2498552 10364177 Psed_2341 Pseudonocardia dioxanivorans CB1190 Mg2 transporter protein CorA family protein YP_004332404.1 2497473 R 675635 CDS YP_004332405.1 331696166 10364178 complement(2498898..2499353) 1 NC_015312.1 KEGG: gob:Gobs_4976 hypothetical protein; hypothetical protein 2499353 10364178 Psed_2342 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332405.1 2498898 R 675635 CDS YP_004332406.1 331696167 10364179 2499533..2499724 1 NC_015312.1 hypothetical protein 2499724 10364179 Psed_2343 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332406.1 2499533 D 675635 CDS YP_004332407.1 331696168 10364180 2499851..2500429 1 NC_015312.1 PFAM: Haemerythrin/HHE cation-binding motif; KEGG: cef:CE2760 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 2500429 10364180 Psed_2344 Pseudonocardia dioxanivorans CB1190 hemerythrin HHE cation binding domain-containing protein YP_004332407.1 2499851 D 675635 CDS YP_004332408.1 331696169 10364183 complement(2501494..2502390) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: kra:Krad_2810 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 2502390 10364183 Psed_2347 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332408.1 2501494 R 675635 CDS YP_004332409.1 331696170 10364184 2502688..2503845 1 NC_015312.1 KEGG: kra:Krad_0034 hypothetical protein; hypothetical protein 2503845 10364184 Psed_2348 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332409.1 2502688 D 675635 CDS YP_004332410.1 331696171 10364185 2503871..2504284 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; KEGG: ami:Amir_5361 anti-sigma regulatory factor, serine/threonine protein kinase; ATP-binding protein 2504284 10364185 Psed_2349 Pseudonocardia dioxanivorans CB1190 ATP-binding protein YP_004332410.1 2503871 D 675635 CDS YP_004332411.1 331696172 10364186 2504405..2505217 1 NC_015312.1 KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; FliA/WhiG subfamily RNA polymerase sigma-28 subunit 2505217 10364186 Psed_2350 Pseudonocardia dioxanivorans CB1190 FliA/WhiG subfamily RNA polymerase sigma-28 subunit YP_004332411.1 2504405 D 675635 CDS YP_004332412.1 331696173 10364187 complement(2505233..2505538) 1 NC_015312.1 KEGG: mil:ML5_5540 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2505538 10364187 Psed_2351 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004332412.1 2505233 R 675635 CDS YP_004332413.1 331696174 10364188 2505615..2506394 1 NC_015312.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: fre:Franean1_1430 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; methionine aminopeptidase 2506394 10364188 Psed_2352 Pseudonocardia dioxanivorans CB1190 methionine aminopeptidase YP_004332413.1 2505615 D 675635 CDS YP_004332414.1 331696175 10364189 complement(2506401..2506742) 1 NC_015312.1 KEGG: gym:GYMC10_4043 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 2506742 10364189 Psed_2353 Pseudonocardia dioxanivorans CB1190 TraR/DksA family transcriptional regulator YP_004332414.1 2506401 R 675635 CDS YP_004332415.1 331696176 10364190 complement(2506780..2508552) 1 NC_015312.1 KEGG: amd:AMED_7729 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 2508552 10364190 Psed_2354 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase subunit I YP_004332415.1 2506780 R 675635 CDS YP_004332416.1 331696177 10364191 complement(2508554..2508820) 1 NC_015312.1 hypothetical protein 2508820 10364191 Psed_2355 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332416.1 2508554 R 675635 CDS YP_004332417.1 331696178 10364193 complement(2509498..2510070) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_3042 TetR family transcriptional regulator; TetR family transcriptional regulator 2510070 10364193 Psed_2357 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332417.1 2509498 R 675635 CDS YP_004332418.1 331696179 10364194 2510273..2510725 1 NC_015312.1 PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: amd:AMED_3041 carbon-monoxide dehydrogenase small subunit; (2Fe-2S)-binding protein 2510725 10364194 Psed_2358 Pseudonocardia dioxanivorans CB1190 (2Fe-2S)-binding protein YP_004332418.1 2510273 D 675635 CDS YP_004332419.1 331696180 10364195 2510712..2511686 1 NC_015312.1 KEGG: amd:AMED_3040 carbon-monoxide dehydrogenase medium subunit; PFAM: Molybdopterin dehydrogenase, FAD-binding; xanthine dehydrogenase 2511686 10364195 Psed_2359 Pseudonocardia dioxanivorans CB1190 xanthine dehydrogenase YP_004332419.1 2510712 D 675635 CDS YP_004332420.1 331696181 10364196 2511683..2513869 1 NC_015312.1 KEGG: sen:SACE_4618 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase 2513869 10364196 Psed_2360 Pseudonocardia dioxanivorans CB1190 xanthine dehydrogenase YP_004332420.1 2511683 D 675635 CDS YP_004332421.1 331696182 10364197 complement(2513920..2514987) 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sro:Sros_5491 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2514987 10364197 Psed_2361 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004332421.1 2513920 R 675635 CDS YP_004332422.1 331696183 10364198 2515105..2516304 1 NC_015312.1 KEGG: sgr:SGR_6670 dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; S-(hydroxymethyl)glutathione dehydrogenase 2516304 10364198 Psed_2362 Pseudonocardia dioxanivorans CB1190 S-(hydroxymethyl)glutathione dehydrogenase YP_004332422.1 2515105 D 675635 CDS YP_004332423.1 331696184 10364199 2516553..2516969 1 NC_015312.1 KEGG: amd:AMED_5201 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein 2516969 10364199 Psed_2363 Pseudonocardia dioxanivorans CB1190 signal transduction protein YP_004332423.1 2516553 D 675635 CDS YP_004332424.1 331696185 10364201 complement(2517746..2518627) 1 NC_015312.1 KEGG: kfl:Kfla_4219 catalase; PFAM: Catalase, manganese; catalase 2518627 10364201 Psed_2365 Pseudonocardia dioxanivorans CB1190 catalase YP_004332424.1 2517746 R 675635 CDS YP_004332425.1 331696186 10364202 complement(2518793..2519755) 1 NC_015312.1 PFAM: Protein of unknown function DUF2260; KEGG: nda:Ndas_3470 protein of unknown function DUF2260; hypothetical protein 2519755 10364202 Psed_2366 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332425.1 2518793 R 675635 CDS YP_004332426.1 331696187 10364203 complement(2519759..2520778) 1 NC_015312.1 KEGG: nda:Ndas_3469 hypothetical protein; hypothetical protein 2520778 10364203 Psed_2367 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332426.1 2519759 R 675635 CDS YP_004332427.1 331696188 10364204 complement(2520775..2520999) 1 NC_015312.1 PFAM: Iron sulphur-containing domain, CDGSH-type; KEGG: nda:Ndas_3468 iron sulfur domain-containing, CDGSH-type; Iron sulfur domain-containing protein 2520999 10364204 Psed_2368 Pseudonocardia dioxanivorans CB1190 Iron sulfur domain-containing protein YP_004332427.1 2520775 R 675635 CDS YP_004332428.1 331696189 10364205 complement(2520992..2521639) 1 NC_015312.1 KEGG: kra:Krad_3360 methylase; TIGRFAM: methylase; PFAM: Methyltransferase small; methylase 2521639 10364205 Psed_2369 Pseudonocardia dioxanivorans CB1190 methylase YP_004332428.1 2520992 R 675635 CDS YP_004332429.1 331696190 10364206 2522050..2522409 1 NC_015312.1 hypothetical protein 2522409 10364206 Psed_2370 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332429.1 2522050 D 675635 CDS YP_004332430.1 331696191 10364207 2523106..2524716 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fri:FraEuI1c_3106 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 2524716 10364207 Psed_2371 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332430.1 2523106 D 675635 CDS YP_004332431.1 331696192 10364208 2524822..2525772 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3107 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2525772 10364208 Psed_2372 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332431.1 2524822 D 675635 CDS YP_004332432.1 331696193 10364209 2525769..2526683 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3108 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2526683 10364209 Psed_2373 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332432.1 2525769 D 675635 CDS YP_004332433.1 331696194 10364210 2526733..2527827 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: ske:Sked_34610 F420-dependent methylene-tetrahydromethanopterin reductase; luciferase-like protein 2527827 10364210 Psed_2374 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004332433.1 2526733 D 675635 CDS YP_004332434.1 331696195 10364211 complement(2527895..2528077) 1 NC_015312.1 hypothetical protein 2528077 10364211 Psed_2375 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332434.1 2527895 R 675635 CDS YP_004332435.1 331696196 10364212 complement(2528166..2528738) 1 NC_015312.1 PFAM: ANTAR; KEGG: gob:Gobs_3633 ANTAR domain-containing protein; ANTAR domain-containing protein 2528738 10364212 Psed_2376 Pseudonocardia dioxanivorans CB1190 ANTAR domain-containing protein YP_004332435.1 2528166 R 675635 CDS YP_004332436.1 331696197 10364213 2528819..2529502 1 NC_015312.1 manually curated; PFAM: GAF; ANTAR; KEGG: fre:Franean1_0255 GAF sensor protein; SMART: GAF; GAF domain-containing protein 2529502 10364213 Psed_2377 Pseudonocardia dioxanivorans CB1190 GAF domain-containing protein YP_004332436.1 2528819 D 675635 CDS YP_004332437.1 331696198 10364214 2529551..2530555 1 NC_015312.1 KEGG: amd:AMED_5210 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase; TIGRFAM: Glucose-6-phosphate dehydrogenase-related, F420-dependent; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 2530555 10364214 Psed_2378 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004332437.1 2529551 D 675635 CDS YP_004332438.1 331696199 10364216 2531231..2532142 1 NC_015312.1 KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; SigB/F/G subfamily RNA polymerase sigma-28 subunit 2532142 10364216 Psed_2380 Pseudonocardia dioxanivorans CB1190 SigB/F/G subfamily RNA polymerase sigma-28 subunit YP_004332438.1 2531231 D 675635 CDS YP_004332439.1 331696200 10364217 2532229..2533833 1 NC_015312.1 KEGG: svi:Svir_34940 fused histidine kinase with GAF domain/SpoIIE-like protein; PFAM: Sporulation stage II, protein E C-terminal; GAF; ATPase-like, ATP-binding domain; SMART: Protein phosphatase 2C-like; GAF; GAF sensor-containing protein serine/threonine phosphatase 2533833 10364217 Psed_2381 Pseudonocardia dioxanivorans CB1190 GAF sensor-containing protein serine/threonine phosphatase YP_004332439.1 2532229 D 675635 CDS YP_004332440.1 331696201 10364218 2533830..2534147 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: svi:Svir_34950 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); sulfate transporter/antisigma-factor antagonist STAS 2534147 10364218 Psed_2382 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004332440.1 2533830 D 675635 CDS YP_004332441.1 331696202 10364219 2534247..2534498 1 NC_015312.1 hypothetical protein 2534498 10364219 Psed_2383 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332441.1 2534247 D 675635 CDS YP_004332442.1 331696203 10364220 2534775..2535218 1 NC_015312.1 KEGG: rha:RHA1_ro00704 hypothetical protein; hypothetical protein 2535218 10364220 Psed_2384 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332442.1 2534775 D 675635 CDS YP_004332443.1 331696204 10364221 2535510..2536340 1 NC_015312.1 KEGG: mjl:Mjls_2373 hypothetical protein; hypothetical protein 2536340 10364221 Psed_2385 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332443.1 2535510 D 675635 CDS YP_004332444.1 331696205 10364222 2536333..2537631 1 NC_015312.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: rha:RHA1_ro03411 hypothetical protein; cyclase 2537631 10364222 Psed_2386 Pseudonocardia dioxanivorans CB1190 cyclase YP_004332444.1 2536333 D 675635 CDS YP_004332445.1 331696206 10364223 2537632..2538069 1 NC_015312.1 KEGG: sen:SACE_0974 gas vesicle synthesis-like protein; HAMAP: Gas vesicle structural protein; PFAM: Gas vesicle protein GvpA; gas vesicle structural protein 2538069 10364223 Psed_2387 Pseudonocardia dioxanivorans CB1190 gas vesicle structural protein YP_004332445.1 2537632 D 675635 CDS YP_004332446.1 331696207 10364224 2538066..2538797 1 NC_015312.1 PFAM: Gas vesicle protein GvpL/GvpF; KEGG: sen:SACE_0973 gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF 2538797 10364224 Psed_2388 Pseudonocardia dioxanivorans CB1190 gas vesicle synthesis GvpLGvpF YP_004332446.1 2538066 D 675635 CDS YP_004332447.1 331696208 10364225 2538804..2539034 1 NC_015312.1 KEGG: req:REQ_25930 gas vesicle protein GvpG; gas vesicle protein GvpG 2539034 10364225 Psed_2389 Pseudonocardia dioxanivorans CB1190 gas vesicle protein GvpG YP_004332447.1 2538804 D 675635 CDS YP_004332448.1 331696209 10364226 2539067..2539903 1 NC_015312.1 PFAM: Gas vesicle protein GvpO; KEGG: sen:SACE_0971 hypothetical protein; gas vesicle synthesis family protein 2539903 10364226 Psed_2390 Pseudonocardia dioxanivorans CB1190 gas vesicle synthesis family protein YP_004332448.1 2539067 D 675635 CDS YP_004332449.1 331696210 10364227 2539921..2540307 1 NC_015312.1 PFAM: Gas vesicle protein GvpA; KEGG: sro:Sros_6859 hypothetical protein; gas vesicle protein GvpA 2540307 10364227 Psed_2391 Pseudonocardia dioxanivorans CB1190 gas vesicle protein GvpA YP_004332449.1 2539921 D 675635 CDS YP_004332450.1 331696211 10364228 2540304..2541053 1 NC_015312.1 PFAM: Gas vesicle protein GvpL/GvpF; KEGG: msm:MSMEG_5746 gas vesicle protein; gas vesicle synthesis GvpLGvpF 2541053 10364228 Psed_2392 Pseudonocardia dioxanivorans CB1190 gas vesicle synthesis GvpLGvpF YP_004332450.1 2540304 D 675635 CDS YP_004332451.1 331696212 10364229 2541050..2541250 1 NC_015312.1 PFAM: Gas vesicle protein GvpA; KEGG: req:REQ_25970 gas vesicle protein; gas vesicle protein GvpA 2541250 10364229 Psed_2393 Pseudonocardia dioxanivorans CB1190 gas vesicle protein GvpA YP_004332451.1 2541050 D 675635 CDS YP_004332452.1 331696213 10364230 2541243..2541542 1 NC_015312.1 PFAM: Gas vesicle protein GvpK; KEGG: msm:MSMEG_5744 gas vesicle protein K; gas vesicle protein K 2541542 10364230 Psed_2394 Pseudonocardia dioxanivorans CB1190 gas vesicle protein K YP_004332452.1 2541243 D 675635 CDS YP_004332453.1 331696214 10364231 complement(2541583..2541846) 1 NC_015312.1 hypothetical protein 2541846 10364231 Psed_2395 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332453.1 2541583 R 675635 CDS YP_004332454.1 331696215 10364232 complement(2541970..2542167) 1 NC_015312.1 hypothetical protein 2542167 10364232 Psed_2396 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332454.1 2541970 R 675635 CDS YP_004332455.1 331696216 10364233 2542357..2543379 1 NC_015312.1 KEGG: ami:Amir_2567 acyl-CoA dehydrogenase-related protein; acyl-CoA dehydrogenase-like protein 2543379 10364233 Psed_2397 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase-like protein YP_004332455.1 2542357 D 675635 CDS YP_004332456.1 331696217 10364234 2543487..2544722 1 NC_015312.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; Methyltransferase type 12; KEGG: ami:Amir_2568 LmbE family protein; LmbE family protein 2544722 10364234 Psed_2398 Pseudonocardia dioxanivorans CB1190 LmbE family protein YP_004332456.1 2543487 D 675635 CDS YP_004332457.1 331696218 10364235 2544719..2545528 1 NC_015312.1 KEGG: aau:AAur_3425 glycosyl transferase, group 2 family protein; glycosyl transferase protein 2545528 10364235 Psed_2399 Pseudonocardia dioxanivorans CB1190 glycosyl transferase protein YP_004332457.1 2544719 D 675635 CDS YP_004332458.1 331696219 10364236 complement(2545619..2546164) 1 NC_015312.1 PFAM: Ferritin/Dps protein; KEGG: kra:Krad_1159 ferritin Dps family protein; ferritin 2546164 10364236 Psed_2400 Pseudonocardia dioxanivorans CB1190 ferritin YP_004332458.1 2545619 R 675635 CDS YP_004332459.1 331696220 10364237 complement(2546445..2547650) 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: pth:PTH_2396 transposase and inactivated derivatives; transposase IS116/IS110/IS902 family protein 2547650 10364237 Psed_2401 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004332459.1 2546445 R 675635 CDS YP_004332460.1 331696221 10364238 2547911..2548600 1 NC_015312.1 KEGG: rxy:Rxyl_2073 hypothetical protein; hypothetical protein 2548600 10364238 Psed_2402 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332460.1 2547911 D 675635 CDS YP_004332461.1 331696222 10364239 complement(2548683..2548895) 1 NC_015312.1 KEGG: ank:AnaeK_0832 DNA ligase D; DNA ligase D 2548895 10364239 Psed_2403 Pseudonocardia dioxanivorans CB1190 DNA ligase D YP_004332461.1 2548683 R 675635 CDS YP_004332462.1 331696223 10364241 complement(2549534..2550073) 1 NC_015312.1 KEGG: scb:SCAB_23781 hypothetical protein; hypothetical protein 2550073 10364241 Psed_2405 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332462.1 2549534 R 675635 CDS YP_004332463.1 331696224 10364242 complement(2550211..2551488) 1 NC_015312.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 2551488 10364242 Psed_2406 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004332463.1 2550211 R 675635 CDS YP_004332464.1 331696225 10364243 complement(2551605..2552282) 1 NC_015312.1 KEGG: rop:ROP_00170 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 2552282 10364243 Psed_2407 Pseudonocardia dioxanivorans CB1190 protein tyrosine phosphatase YP_004332464.1 2551605 R 675635 CDS YP_004332465.1 331696226 10364244 complement(2552314..2553459) 1 NC_015312.1 KEGG: sen:SACE_5143 arsenical resistance protein/arsenate reductase; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 2553459 10364244 Psed_2408 Pseudonocardia dioxanivorans CB1190 arsenical-resistance protein YP_004332465.1 2552314 R 675635 CDS YP_004332466.1 331696227 10364245 complement(2553456..2553839) 1 NC_015312.1 KEGG: amd:AMED_0760 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 2553839 10364245 Psed_2409 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004332466.1 2553456 R 675635 CDS YP_004332467.1 331696228 10364246 complement(2554007..2555329) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4982 integral membrane transport protein; major facilitator superfamily protein 2555329 10364246 Psed_2410 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332467.1 2554007 R 675635 CDS YP_004332468.1 331696229 10364247 complement(2555357..2556718) 1 NC_015312.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sen:SACE_4981 flavin binding monooxygenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2556718 10364247 Psed_2411 Pseudonocardia dioxanivorans CB1190 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004332468.1 2555357 R 675635 CDS YP_004332469.1 331696230 10364248 2556813..2557685 1 NC_015312.1 KEGG: rop:ROP_00080 ArsR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 2557685 10364248 Psed_2412 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004332469.1 2556813 D 675635 CDS YP_004332470.1 331696231 10364249 complement(2557730..2557966) 1 NC_015312.1 hypothetical protein 2557966 10364249 Psed_2413 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332470.1 2557730 R 675635 CDS YP_004332471.1 331696232 10364250 2558119..2558355 1 NC_015312.1 KEGG: kfl:Kfla_3821 hypothetical protein; hypothetical protein 2558355 10364250 Psed_2414 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332471.1 2558119 D 675635 CDS YP_004332472.1 331696233 10364251 2558352..2559023 1 NC_015312.1 KEGG: kra:Krad_0228 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 2559023 10364251 Psed_2415 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004332472.1 2558352 D 675635 CDS YP_004332473.1 331696234 10364252 complement(2558954..2559949) 1 NC_015312.1 KEGG: sen:SACE_3564 polysulphide reductase, NrfD; polysulfide reductase NrfD 2559949 10364252 Psed_2416 Pseudonocardia dioxanivorans CB1190 polysulfide reductase NrfD YP_004332473.1 2558954 R 675635 CDS YP_004332474.1 331696235 10364253 complement(2560005..2560865) 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: sen:SACE_3563 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin 2560865 10364253 Psed_2417 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004332474.1 2560005 R 675635 CDS YP_004332475.1 331696236 10364254 complement(2560867..2564103) 1 NC_015312.1 KEGG: nda:Ndas_0021 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; manually curated; TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; formate dehydrogenase subunit alpha 2564103 10364254 Psed_2418 Pseudonocardia dioxanivorans CB1190 formate dehydrogenase subunit alpha YP_004332475.1 2560867 R 675635 CDS YP_004332476.1 331696237 10364255 complement(2564145..2564723) 1 NC_015312.1 KEGG: amd:AMED_4268 flavodoxin-like protein; flavodoxin-like protein 2564723 10364255 Psed_2419 Pseudonocardia dioxanivorans CB1190 flavodoxin-like protein YP_004332476.1 2564145 R 675635 CDS YP_004332477.1 331696238 10364256 2564801..2565805 1 NC_015312.1 KEGG: mjl:Mjls_1517 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 2565805 10364256 Psed_2420 Pseudonocardia dioxanivorans CB1190 methylenetetrahydrofolate reductase YP_004332477.1 2564801 D 675635 CDS YP_004332478.1 331696239 10364257 2565802..2566578 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: mgi:Mflv_3460 methyltransferase type 11; type 11 methyltransferase 2566578 10364257 Psed_2421 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004332478.1 2565802 D 675635 CDS YP_004332479.1 331696240 10364258 complement(2566559..2567092) 1 NC_015312.1 KEGG: rha:RHA1_ro03148 hypothetical protein; hypothetical protein 2567092 10364258 Psed_2422 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332479.1 2566559 R 675635 CDS YP_004332480.1 331696241 10364259 2567161..2567610 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: ami:Amir_1760 hypothetical protein; polyketide cyclase/dehydrase 2567610 10364259 Psed_2423 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004332480.1 2567161 D 675635 CDS YP_004332481.1 331696242 10364260 2567607..2569205 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: amd:AMED_4286 FAD-dependent oxidoreductase; FAD dependent oxidoreductase 2569205 10364260 Psed_2424 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004332481.1 2567607 D 675635 CDS YP_004332482.1 331696243 10364261 2569364..2570185 1 NC_015312.1 KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; FliA/WhiG subfamily RNA polymerase sigma-28 subunit 2570185 10364261 Psed_2425 Pseudonocardia dioxanivorans CB1190 FliA/WhiG subfamily RNA polymerase sigma-28 subunit YP_004332482.1 2569364 D 675635 CDS YP_004332483.1 331696244 10364262 complement(2570198..2570527) 1 NC_015312.1 hypothetical protein 2570527 10364262 Psed_2426 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332483.1 2570198 R 675635 CDS YP_004332484.1 331696245 10364263 2570655..2572460 1 NC_015312.1 KEGG: amd:AMED_3305 pyruvate dehydrogenase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase 2572460 10364263 Psed_2427 Pseudonocardia dioxanivorans CB1190 acetolactate synthase YP_004332484.1 2570655 D 675635 CDS YP_004332485.1 331696246 10364264 2572632..2573474 1 NC_015312.1 KEGG: gbm:Gbem_0994 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2573474 10364264 Psed_2428 Pseudonocardia dioxanivorans CB1190 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004332485.1 2572632 D 675635 CDS YP_004332486.1 331696247 10364265 complement(2573570..2573932) 1 NC_015312.1 KEGG: sro:Sros_9028 hypothetical protein; hypothetical protein 2573932 10364265 Psed_2429 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332486.1 2573570 R 675635 CDS YP_004332487.1 331696248 10364266 complement(2573999..2574793) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0850 short-chain dehydrogenase/reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 2574793 10364266 Psed_2430 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332487.1 2573999 R 675635 CDS YP_004332488.1 331696249 10364267 complement(2574905..2575891) 1 NC_015312.1 KEGG: sma:SAV_654 oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; pyridoxine 4-dehydrogenase 2575891 10364267 Psed_2431 Pseudonocardia dioxanivorans CB1190 pyridoxine 4-dehydrogenase YP_004332488.1 2574905 R 675635 CDS YP_004332489.1 331696250 10364268 2575992..2576849 1 NC_015312.1 KEGG: sma:SAV_655 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2576849 10364268 Psed_2432 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004332489.1 2575992 D 675635 CDS YP_004332490.1 331696251 10364269 complement(2576897..2577505) 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: sco:SCO0201 integral membrane protein SCJ1213c; DoxX family protein 2577505 10364269 Psed_2433 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004332490.1 2576897 R 675635 CDS YP_004332491.1 331696252 10364270 2577724..2579484 1 NC_015312.1 KEGG: fre:Franean1_1969 GAF sensor signal transduction histidine kinase; PFAM: GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: GAF; GAF sensor signal transduction histidine kinase 2579484 10364270 Psed_2434 Pseudonocardia dioxanivorans CB1190 GAF sensor signal transduction histidine kinase YP_004332491.1 2577724 D 675635 CDS YP_004332492.1 331696253 10364271 complement(2579524..2579727) 1 NC_015312.1 KEGG: cai:Caci_6674 hypothetical protein; hypothetical protein 2579727 10364271 Psed_2435 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332492.1 2579524 R 675635 CDS YP_004332493.1 331696254 10364272 complement(2580151..2581125) 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: ami:Amir_2414 nitroreductase; nitroreductase 2581125 10364272 Psed_2436 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004332493.1 2580151 R 675635 CDS YP_004332494.1 331696255 10364273 complement(2581276..2581857) 1 NC_015312.1 PFAM: Cystathionine beta-synthase, core; KEGG: mka:MK1245 CBS domain-containing protein; CBS domain-containing protein 2581857 10364273 Psed_2437 Pseudonocardia dioxanivorans CB1190 CBS domain-containing protein YP_004332494.1 2581276 R 675635 CDS YP_004332495.1 331696256 10364274 2582001..2583845 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: afv:AFLA_059740 hypothetical protein; FAD dependent oxidoreductase 2583845 10364274 Psed_2438 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004332495.1 2582001 D 675635 CDS YP_004332496.1 331696257 10364275 2583937..2586090 1 NC_015312.1 KEGG: amd:AMED_3027 penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase 2586090 10364275 Psed_2439 Pseudonocardia dioxanivorans CB1190 peptidoglycan glycosyltransferase YP_004332496.1 2583937 D 675635 CDS YP_004332497.1 331696258 10364276 complement(2586188..2587000) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: gob:Gobs_1039 alpha/beta hydrolase fold protein; alpha/beta hydrolase 2587000 10364276 Psed_2440 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004332497.1 2586188 R 675635 CDS YP_004332498.1 331696259 10364277 complement(2587038..2588552) 1 NC_015312.1 KEGG: gob:Gobs_1040 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2588552 10364277 Psed_2441 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004332498.1 2587038 R 675635 CDS YP_004332499.1 331696260 10364278 2588693..2590456 1 NC_015312.1 KEGG: gob:Gobs_1836 GAF modulated sigma54 specific transcriptional regulator, Fis family; manually curated; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; Fis family transcriptional regulator 2590456 10364278 Psed_2442 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004332499.1 2588693 D 675635 CDS YP_004332500.1 331696261 10364279 complement(2590540..2590875) 1 NC_015312.1 KEGG: amd:AMED_0570 hypothetical protein; hypothetical protein 2590875 10364279 Psed_2443 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332500.1 2590540 R 675635 CDS YP_004332501.1 331696262 10364280 2591089..2592390 1 NC_015312.1 KEGG: nml:Namu_4674 peptidase S1 and S6 chymotrypsin/Hap; PFAM: PDZ/DHR/GLGF; Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 2592390 10364280 Psed_2444 Pseudonocardia dioxanivorans CB1190 PDZ/DHR/GLGF domain-containing protein YP_004332501.1 2591089 D 675635 CDS YP_004332502.1 331696263 10364281 2592759..2593967 1 NC_015312.1 PFAM: Cation/H+ exchanger; KEGG: nml:Namu_0334 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2593967 10364281 Psed_2445 Pseudonocardia dioxanivorans CB1190 sodium/hydrogen exchanger YP_004332502.1 2592759 D 675635 CDS YP_004332503.1 331696264 10364282 2594065..2594835 1 NC_015312.1 PFAM: Crotonase, core; KEGG: fal:FRAAL2442 enoyl CoA dehydratase/isomerase; enoyl-CoA hydratase 2594835 10364282 Psed_2446 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332503.1 2594065 D 675635 CDS YP_004332504.1 331696265 10364283 complement(2594887..2595225) 1 NC_015312.1 hypothetical protein 2595225 10364283 Psed_2447 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332504.1 2594887 R 675635 CDS YP_004332505.1 331696266 10364284 2595604..2597268 1 NC_015312.1 KEGG: aac:Aaci_2310 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2597268 10364284 Psed_2448 Pseudonocardia dioxanivorans CB1190 integral membrane sensor signal transduction histidine kinase YP_004332505.1 2595604 D 675635 CDS YP_004332506.1 331696267 10364285 2597265..2597870 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: met:M446_1936 isochorismatase hydrolase; isochorismatase hydrolase 2597870 10364285 Psed_2449 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004332506.1 2597265 D 675635 CDS YP_004332507.1 331696268 10364286 2597867..2598601 1 NC_015312.1 KEGG: sma:SAV_4857 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2598601 10364286 Psed_2450 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332507.1 2597867 D 675635 CDS YP_004332508.1 331696269 10364287 2598565..2598678 1 NC_015312.1 hypothetical protein 2598678 10364287 Psed_2451 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332508.1 2598565 D 675635 CDS YP_004332509.1 331696270 10364288 2598834..2600246 1 NC_015312.1 PFAM: Amidase; KEGG: sna:Snas_3274 amidase; amidase 2600246 10364288 Psed_2452 Pseudonocardia dioxanivorans CB1190 amidase YP_004332509.1 2598834 D 675635 CDS YP_004332510.1 331696271 10364289 complement(2600258..2601508) 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 2601508 10364289 Psed_2453 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004332510.1 2600258 R 675635 CDS YP_004332511.1 331696272 10364290 2601760..2602056 1 NC_015312.1 hypothetical protein 2602056 10364290 Psed_2454 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332511.1 2601760 D 675635 CDS YP_004332512.1 331696273 10364291 complement(2602112..2602882) 1 NC_015312.1 KEGG: kra:Krad_2500 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2602882 10364291 Psed_2455 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332512.1 2602112 R 675635 CDS YP_004332513.1 331696274 10364292 complement(2602875..2603120) 1 NC_015312.1 hypothetical protein 2603120 10364292 Psed_2456 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332513.1 2602875 R 675635 CDS YP_004332514.1 331696275 10364293 complement(2603117..2605114) 1 NC_015312.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: cwo:Cwoe_2300 5-oxoprolinase (ATP-hydrolyzing); hydantoinase B/oxoprolinase 2605114 10364293 Psed_2457 Pseudonocardia dioxanivorans CB1190 hydantoinase B/oxoprolinase YP_004332514.1 2603117 R 675635 CDS YP_004332515.1 331696276 10364294 complement(2605111..2607162) 1 NC_015312.1 KEGG: sti:Sthe_2892 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 2607162 10364294 Psed_2458 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004332515.1 2605111 R 675635 CDS YP_004332516.1 331696277 10364295 complement(2607309..2609111) 1 NC_015312.1 KEGG: msm:MSMEG_4044 GAF domain-containing protein; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR 2609111 10364295 Psed_2459 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004332516.1 2607309 R 675635 CDS YP_004332517.1 331696278 10364296 2609169..2609816 1 NC_015312.1 KEGG: mab:MAB_1600c hypothetical protein; hypothetical protein 2609816 10364296 Psed_2460 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332517.1 2609169 D 675635 CDS YP_004332518.1 331696279 10364297 2609813..2609947 1 NC_015312.1 hypothetical protein 2609947 10364297 Psed_2461 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332518.1 2609813 D 675635 CDS YP_004332519.1 331696280 10364298 2610318..2611340 1 NC_015312.1 KEGG: pla:Plav_3077 hypothetical protein; hypothetical protein 2611340 10364298 Psed_2462 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332519.1 2610318 D 675635 CDS YP_004332520.1 331696281 10364299 2611340..2612944 1 NC_015312.1 KEGG: xau:Xaut_1704 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2612944 10364299 Psed_2463 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004332520.1 2611340 D 675635 CDS YP_004332521.1 331696282 10364300 complement(2613082..2614509) 1 NC_015312.1 PFAM: Glycine cleavage T-protein, N-terminal; KEGG: svi:Svir_11650 aminomethyltransferase; glycine cleavage T protein (aminomethyl transferase) 2614509 10364300 Psed_2464 Pseudonocardia dioxanivorans CB1190 glycine cleavage T protein (aminomethyl transferase) YP_004332521.1 2613082 R 675635 CDS YP_004332522.1 331696283 10364301 2614806..2615165 1 NC_015312.1 PFAM: Extradiol ring-cleavage dioxygenase LigAB, LigA subunit; KEGG: svi:Svir_38370 protocatechuate 4,5-dioxygenase alpha subunit; extradiol ring-cleavage dioxygenase class III protein subunit A 2615165 10364301 Psed_2465 Pseudonocardia dioxanivorans CB1190 extradiol ring-cleavage dioxygenase class III protein subunit A YP_004332522.1 2614806 D 675635 CDS YP_004332523.1 331696284 10364302 2615158..2616015 1 NC_015312.1 KEGG: svi:Svir_38360 protocatechuate 4,5-dioxygenase beta subunit; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; protocatechuate 4,5-dioxygenase 2616015 10364302 Psed_2466 Pseudonocardia dioxanivorans CB1190 protocatechuate 4,5-dioxygenase YP_004332523.1 2615158 D 675635 CDS YP_004332524.1 331696285 10364303 2616234..2617052 1 NC_015312.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: amd:AMED_2250 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2617052 10364303 Psed_2467 Pseudonocardia dioxanivorans CB1190 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004332524.1 2616234 D 675635 CDS YP_004332525.1 331696286 10364304 complement(2617057..2618070) 1 NC_015312.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: pzu:PHZ_c3010 adenosine deaminase; adenosine deaminase 2618070 10364304 Psed_2468 Pseudonocardia dioxanivorans CB1190 adenosine deaminase YP_004332525.1 2617057 R 675635 CDS YP_004332526.1 331696287 10364305 complement(2618094..2618816) 1 NC_015312.1 KEGG: cwo:Cwoe_0946 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2618816 10364305 Psed_2469 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332526.1 2618094 R 675635 CDS YP_004332527.1 331696288 10364306 complement(2618861..2619754) 1 NC_015312.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: cai:Caci_5118 aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein 2619754 10364306 Psed_2470 Pseudonocardia dioxanivorans CB1190 NADP-dependent oxidoreductase domain-containing protein YP_004332527.1 2618861 R 675635 CDS YP_004332528.1 331696289 10364307 2619838..2620398 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mpa:MAP4047 hypothetical protein; TetR family transcriptional regulator 2620398 10364307 Psed_2471 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332528.1 2619838 D 675635 CDS YP_004332529.1 331696290 10364308 complement(2620379..2621143) 1 NC_015312.1 KEGG: kra:Krad_4116 Cna B domain protein; Cna B domain-containing protein 2621143 10364308 Psed_2472 Pseudonocardia dioxanivorans CB1190 Cna B domain-containing protein YP_004332529.1 2620379 R 675635 CDS YP_004332530.1 331696291 10364309 complement(2621140..2622909) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_3472 major facilitator transporter; major facilitator superfamily protein 2622909 10364309 Psed_2473 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332530.1 2621140 R 675635 CDS YP_004332531.1 331696292 10364310 2623103..2623759 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_3455 TetR family transcriptional regulator; TetR family transcriptional regulator 2623759 10364310 Psed_2474 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332531.1 2623103 D 675635 CDS YP_004332532.1 331696293 10364311 complement(2623931..2624296) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll7906 ferredoxin; Rieske (2Fe-2S) domain-containing protein 2624296 10364311 Psed_2475 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004332532.1 2623931 R 675635 CDS YP_004332533.1 331696294 10364312 complement(2624293..2625150) 1 NC_015312.1 KEGG: cfl:Cfla_0281 fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 2625150 10364312 Psed_2476 Pseudonocardia dioxanivorans CB1190 ureidoglycolate lyase YP_004332533.1 2624293 R 675635 CDS YP_004332534.1 331696295 10364313 complement(2625160..2626443) 1 NC_015312.1 PFAM: Peptidase M24, structural domain; KEGG: rpb:RPB_4421 peptidase M24; peptidase M24 2626443 10364313 Psed_2477 Pseudonocardia dioxanivorans CB1190 peptidase M24 YP_004332534.1 2625160 R 675635 CDS YP_004332535.1 331696296 10364314 complement(2626480..2627667) 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: rlt:Rleg2_6338 amidohydrolase 2; amidohydrolase 2627667 10364314 Psed_2478 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004332535.1 2626480 R 675635 CDS YP_004332536.1 331696297 10364315 complement(2627669..2628568) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: nfa:nfa32900 hypothetical protein; luciferase-like protein 2628568 10364315 Psed_2479 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004332536.1 2627669 R 675635 CDS YP_004332537.1 331696298 10364316 complement(2628558..2629031) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_1616 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2629031 10364316 Psed_2480 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004332537.1 2628558 R 675635 CDS YP_004332538.1 331696299 10364317 complement(2629028..2629843) 1 NC_015312.1 KEGG: sro:Sros_3030 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2629843 10364317 Psed_2481 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332538.1 2629028 R 675635 CDS YP_004332539.1 331696300 10364318 complement(2629891..2630754) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: rpt:Rpal_1423 inner-membrane translocator; ABC transporter permease 2630754 10364318 Psed_2482 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332539.1 2629891 R 675635 CDS YP_004332540.1 331696301 10364319 complement(2630774..2632006) 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: adg:Adeg_1594 extracellular ligand-binding receptor; ABC transporter substrate-binding protein 2632006 10364319 Psed_2483 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332540.1 2630774 R 675635 CDS YP_004332541.1 331696302 10364320 complement(2632081..2633955) 1 NC_015312.1 KEGG: bge:BC1002_6024 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter permease; SMART: ATPase, AAA+ type, core; ABC transporter 2633955 10364320 Psed_2484 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332541.1 2632081 R 675635 CDS YP_004332542.1 331696303 10364321 2634172..2634765 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pjd:Pjdr2_0210 transcriptional regulator, TetR family; TetR family transcriptional regulator 2634765 10364321 Psed_2485 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332542.1 2634172 D 675635 CDS YP_004332543.1 331696304 10364322 2635002..2635463 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 2635463 10364322 Psed_2486 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004332543.1 2635002 D 675635 CDS YP_004332544.1 331696305 10364323 complement(2635467..2636399) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mno:Mnod_3485 transcriptional regulator, LysR family; LysR family transcriptional regulator 2636399 10364323 Psed_2487 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004332544.1 2635467 R 675635 CDS YP_004332545.1 331696306 10364324 2636477..2637109 1 NC_015312.1 KEGG: nca:Noca_0418 ribonuclease H; PFAM: Ribonuclease H domain; Ribonuclease H 2637109 10364324 Psed_2488 Pseudonocardia dioxanivorans CB1190 Ribonuclease H YP_004332545.1 2636477 D 675635 CDS YP_004332546.1 331696307 10364325 complement(2637286..2638341) 1 NC_015312.1 KEGG: sco:SCO7720 hypothetical protein; hypothetical protein 2638341 10364325 Psed_2489 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332546.1 2637286 R 675635 CDS YP_004332547.1 331696308 10364326 2638458..2639105 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO7719 TetR family transcriptional regulator; TetR family transcriptional regulator 2639105 10364326 Psed_2490 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332547.1 2638458 D 675635 CDS YP_004332548.1 331696309 10364327 complement(2639166..2639915) 1 NC_015312.1 KEGG: rca:Rcas_2128 protein serine/threonine phosphatase; hypothetical protein 2639915 10364327 Psed_2491 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332548.1 2639166 R 675635 CDS YP_004332549.1 331696310 10364328 complement(2640054..2641016) 1 NC_015312.1 KEGG: mgi:Mflv_1496 hypothetical protein; hypothetical protein 2641016 10364328 Psed_2492 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332549.1 2640054 R 675635 CDS YP_004332550.1 331696311 10364329 complement(2641456..2641653) 1 NC_015312.1 hypothetical protein 2641653 10364329 Psed_2493 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332550.1 2641456 R 675635 CDS YP_004332551.1 331696312 10364330 2641781..2642908 1 NC_015312.1 KEGG: rpt:Rpal_3952 thiolase; thiolase 2642908 10364330 Psed_2494 Pseudonocardia dioxanivorans CB1190 thiolase YP_004332551.1 2641781 D 675635 CDS YP_004332552.1 331696313 10364331 2642905..2643210 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: vei:Veis_4005 hypothetical protein; hypothetical protein 2643210 10364331 Psed_2495 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332552.1 2642905 D 675635 CDS YP_004332553.1 331696314 10364332 complement(2643250..2644167) 1 NC_015312.1 PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: rop:ROP_13650 hypothetical protein; hypothetical protein 2644167 10364332 Psed_2496 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332553.1 2643250 R 675635 CDS YP_004332554.1 331696315 10364333 complement(2644179..2645078) 1 NC_015312.1 PFAM: cyclase; KEGG: nca:Noca_1165 cyclase protein; cyclase 2645078 10364333 Psed_2497 Pseudonocardia dioxanivorans CB1190 cyclase YP_004332554.1 2644179 R 675635 CDS YP_004332555.1 331696316 10364334 complement(2645075..2647525) 1 NC_015312.1 KEGG: sti:Sthe_2310 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 2647525 10364334 Psed_2498 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332555.1 2645075 R 675635 CDS YP_004332556.1 331696317 10364335 complement(2647522..2648046) 1 NC_015312.1 KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 2648046 10364335 Psed_2499 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332556.1 2647522 R 675635 CDS YP_004332557.1 331696318 10364336 complement(2648039..2648935) 1 NC_015312.1 KEGG: tro:trd_A0777 carbon monoxide dehydrogenase medium chain (CO dehydrogenase subunit M) (CO-DH M); PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 2648935 10364336 Psed_2500 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332557.1 2648039 R 675635 CDS YP_004332558.1 331696319 10364337 complement(2648980..2649663) 1 NC_015312.1 KEGG: tro:trd_A0077 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2649663 10364337 Psed_2501 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332558.1 2648980 R 675635 CDS YP_004332559.1 331696320 10364338 complement(2649901..2650611) 1 NC_015312.1 KEGG: mva:Mvan_5250 hypothetical protein; hypothetical protein 2650611 10364338 Psed_2502 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332559.1 2649901 R 675635 CDS YP_004332560.1 331696321 10364339 complement(2650711..2651598) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: lch:Lcho_2453 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 2651598 10364339 Psed_2503 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332560.1 2650711 R 675635 CDS YP_004332561.1 331696322 10364341 2652293..2653144 1 NC_015312.1 KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; SigB/F/G subfamily RNA polymerase sigma-28 subunit 2653144 10364341 Psed_2505 Pseudonocardia dioxanivorans CB1190 SigB/F/G subfamily RNA polymerase sigma-28 subunit YP_004332561.1 2652293 D 675635 CDS YP_004332562.1 331696323 10364342 complement(2653149..2654504) 1 NC_015312.1 KEGG: msp:Mspyr1_05110 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 2654504 10364342 Psed_2506 Pseudonocardia dioxanivorans CB1190 dihydrolipoyl dehydrogenase YP_004332562.1 2653149 R 675635 CDS YP_004332563.1 331696324 10364343 2654609..2655529 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: ami:Amir_4893 transcriptional regulator, LysR family; LysR family transcriptional regulator 2655529 10364343 Psed_2507 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004332563.1 2654609 D 675635 CDS YP_004332564.1 331696325 10364344 2655526..2656488 1 NC_015312.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: rrs:RoseRS_2516 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 2656488 10364344 Psed_2508 Pseudonocardia dioxanivorans CB1190 vitamin-B12 independent methionine synthase YP_004332564.1 2655526 D 675635 CDS YP_004332565.1 331696326 10364345 2656488..2657270 1 NC_015312.1 PFAM: cyclase; KEGG: nfa:nfa32670 cyclase; cyclase 2657270 10364345 Psed_2509 Pseudonocardia dioxanivorans CB1190 cyclase YP_004332565.1 2656488 D 675635 CDS YP_004332566.1 331696327 10364346 2657321..2658847 1 NC_015312.1 PFAM: Aldehyde dehydrogenase domain; KEGG: tcu:Tcur_0539 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 2658847 10364346 Psed_2510 Pseudonocardia dioxanivorans CB1190 aldehyde dehydrogenase YP_004332566.1 2657321 D 675635 CDS YP_004332567.1 331696328 10364347 2658849..2659256 1 NC_015312.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: gbr:Gbro_0235 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2659256 10364347 Psed_2511 Pseudonocardia dioxanivorans CB1190 4-oxalocrotonate tautomerase YP_004332567.1 2658849 D 675635 CDS YP_004332568.1 331696329 10364348 complement(2659303..2660043) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_3809 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2660043 10364348 Psed_2512 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004332568.1 2659303 R 675635 CDS YP_004332569.1 331696330 10364349 complement(2660040..2660696) 1 NC_015312.1 KEGG: rlt:Rleg2_4436 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 2660696 10364349 Psed_2513 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004332569.1 2660040 R 675635 CDS YP_004332570.1 331696331 10364350 2660897..2662669 1 NC_015312.1 PFAM: PEP-utilising enzyme, mobile domain; KEGG: tcu:Tcur_0540 PEP-utilising protein mobile region; PEP-utilizing protein mobile subunit 2662669 10364350 Psed_2514 Pseudonocardia dioxanivorans CB1190 PEP-utilizing protein mobile subunit YP_004332570.1 2660897 D 675635 CDS YP_004332571.1 331696332 10364351 2662666..2663766 1 NC_015312.1 KEGG: tpe:Tpen_0588 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; pyruvate, water dikinase 2663766 10364351 Psed_2515 Pseudonocardia dioxanivorans CB1190 pyruvate, water dikinase YP_004332571.1 2662666 D 675635 CDS YP_004332572.1 331696333 10364352 complement(2663817..2664338) 1 NC_015312.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: nfa:nfa53120 hypothetical protein; OsmC family protein 2664338 10364352 Psed_2516 Pseudonocardia dioxanivorans CB1190 OsmC family protein YP_004332572.1 2663817 R 675635 CDS YP_004332573.1 331696334 10364353 complement(2664666..2665574) 1 NC_015312.1 KEGG: mva:Mvan_0261 luciferase protein; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4879, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 2665574 10364353 Psed_2517 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004332573.1 2664666 R 675635 CDS YP_004332574.1 331696335 10364354 complement(2665589..2666386) 1 NC_015312.1 KEGG: aac:Aaci_2531 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 2666386 10364354 Psed_2518 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004332574.1 2665589 R 675635 CDS YP_004332575.1 331696336 10364355 2666460..2667716 1 NC_015312.1 KEGG: aeh:Mlg_2359 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase 2667716 10364355 Psed_2519 Pseudonocardia dioxanivorans CB1190 phthalate 4,5-dioxygenase YP_004332575.1 2666460 D 675635 CDS YP_004332576.1 331696337 10364356 2667713..2667955 1 NC_015312.1 hypothetical protein 2667955 10364356 Psed_2520 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332576.1 2667713 D 675635 CDS YP_004332577.1 331696338 10364357 complement(2668061..2668477) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: nde:NIDE2482 dioxygenase, ferredoxin subunit; Rieske (2Fe-2S) domain-containing protein 2668477 10364357 Psed_2521 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004332577.1 2668061 R 675635 CDS YP_004332578.1 331696339 10364358 complement(2668474..2668677) 1 NC_015312.1 KEGG: aac:Aaci_1617 4-oxalocrotonate tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase, bacteria/archaea; PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2668677 10364358 Psed_2522 Pseudonocardia dioxanivorans CB1190 4-oxalocrotonate tautomerase YP_004332578.1 2668474 R 675635 CDS YP_004332579.1 331696340 10364359 complement(2668696..2669454) 1 NC_015312.1 KEGG: pth:PTH_0481 2-keto-4-pentenoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase 2669454 10364359 Psed_2523 Pseudonocardia dioxanivorans CB1190 2-oxopent-4-enoate hydratase YP_004332579.1 2668696 R 675635 CDS YP_004332580.1 331696341 10364360 complement(2669451..2670254) 1 NC_015312.1 KEGG: nml:Namu_4085 2-oxopent-4-enoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase 2670254 10364360 Psed_2524 Pseudonocardia dioxanivorans CB1190 2-oxopent-4-enoate hydratase YP_004332580.1 2669451 R 675635 CDS YP_004332581.1 331696342 10364361 complement(2670343..2671137) 1 NC_015312.1 KEGG: tcu:Tcur_0533 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 2671137 10364361 Psed_2525 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004332581.1 2670343 R 675635 CDS YP_004332582.1 331696343 10364362 complement(2671134..2671847) 1 NC_015312.1 hypothetical protein 2671847 10364362 Psed_2526 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332582.1 2671134 R 675635 CDS YP_004332583.1 331696344 10364363 2671965..2672879 1 NC_015312.1 TIGRFAM: Catechol 2,3 dioxygenase; KEGG: bts:Btus_0957 catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; catechol 2,3 dioxygenase 2672879 10364363 Psed_2527 Pseudonocardia dioxanivorans CB1190 catechol 2,3 dioxygenase YP_004332583.1 2671965 D 675635 CDS YP_004332584.1 331696345 10364364 2672950..2673879 1 NC_015312.1 TIGRFAM: Catechol 2,3 dioxygenase; KEGG: bts:Btus_0957 catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; catechol 2,3 dioxygenase 2673879 10364364 Psed_2528 Pseudonocardia dioxanivorans CB1190 catechol 2,3 dioxygenase YP_004332584.1 2672950 D 675635 CDS YP_004332585.1 331696346 10364365 2673876..2674928 1 NC_015312.1 PFAM: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 2674928 10364365 Psed_2529 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004332585.1 2673876 D 675635 CDS YP_004332586.1 331696347 10364366 2674933..2675781 1 NC_015312.1 KEGG: tcu:Tcur_0533 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 2675781 10364366 Psed_2530 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004332586.1 2674933 D 675635 CDS YP_004332587.1 331696348 10364367 complement(2675836..2676309) 1 NC_015312.1 KEGG: fri:FraEuI1c_4130 hypothetical protein; hypothetical protein 2676309 10364367 Psed_2531 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332587.1 2675836 R 675635 CDS YP_004332588.1 331696349 10364368 2676371..2676994 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_9036 transcriptional regulator, TetR family; TetR family transcriptional regulator 2676994 10364368 Psed_2532 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332588.1 2676371 D 675635 CDS YP_004332589.1 331696350 10364369 complement(2677035..2678192) 1 NC_015312.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: ske:Sked_37200 methionine synthase II; vitamin-B12 independent methionine synthase 2678192 10364369 Psed_2533 Pseudonocardia dioxanivorans CB1190 vitamin-B12 independent methionine synthase YP_004332589.1 2677035 R 675635 CDS YP_004332590.1 331696351 10364370 2678273..2678884 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bts:Btus_0118 transcriptional regulator, TetR family; TetR family transcriptional regulator 2678884 10364370 Psed_2534 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332590.1 2678273 D 675635 CDS YP_004332591.1 331696352 10364371 complement(2678927..2680135) 1 NC_015312.1 KEGG: rrs:RoseRS_0765 cytochrome P450; PFAM: Cytochrome P450; peroxidase 2680135 10364371 Psed_2535 Pseudonocardia dioxanivorans CB1190 peroxidase YP_004332591.1 2678927 R 675635 CDS YP_004332592.1 331696353 10364372 complement(2680132..2681262) 1 NC_015312.1 KEGG: rop:ROP_29670 acetyl-CoA acyltransferase; propanoyl-CoA C-acyltransferase 2681262 10364372 Psed_2536 Pseudonocardia dioxanivorans CB1190 propanoyl-CoA C-acyltransferase YP_004332592.1 2680132 R 675635 CDS YP_004332593.1 331696354 10364373 complement(2681259..2681675) 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: rop:ROP_29680 hypothetical protein; hypothetical protein 2681675 10364373 Psed_2537 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332593.1 2681259 R 675635 CDS YP_004332594.1 331696355 10364374 2681863..2682972 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: sco:SCP1.240c monooxygenase, mmyo; luciferase-like protein 2682972 10364374 Psed_2538 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004332594.1 2681863 D 675635 CDS YP_004332595.1 331696356 10364375 2682972..2683805 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_3937 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 2683805 10364375 Psed_2539 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332595.1 2682972 D 675635 CDS YP_004332596.1 331696357 10364376 2683809..2685350 1 NC_015312.1 KEGG: fra:Francci3_2245 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2685350 10364376 Psed_2540 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004332596.1 2683809 D 675635 CDS YP_004332597.1 331696358 10364377 2685359..2686720 1 NC_015312.1 KEGG: mpd:MCP_1725 phenylacetate-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase; phenylacetate--CoA ligase 2686720 10364377 Psed_2541 Pseudonocardia dioxanivorans CB1190 phenylacetate--CoA ligase YP_004332597.1 2685359 D 675635 CDS YP_004332598.1 331696359 10364378 complement(2686814..2688049) 1 NC_015312.1 KEGG: nml:Namu_0834 membrane dipeptidase; PFAM: Peptidase M19, renal dipeptidase; membrane dipeptidase 2688049 10364378 Psed_2542 Pseudonocardia dioxanivorans CB1190 membrane dipeptidase YP_004332598.1 2686814 R 675635 CDS YP_004332599.1 331696360 10364379 2688254..2688520 1 NC_015312.1 hypothetical protein 2688520 10364379 Psed_2543 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332599.1 2688254 D 675635 CDS YP_004332600.1 331696361 10364380 complement(2688646..2689359) 1 NC_015312.1 PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: fri:FraEuI1c_6883 glutamine amidotransferase class-I; glutamine amidotransferase 2689359 10364380 Psed_2544 Pseudonocardia dioxanivorans CB1190 glutamine amidotransferase YP_004332600.1 2688646 R 675635 CDS YP_004332601.1 331696362 10364381 complement(2689352..2690401) 1 NC_015312.1 KEGG: msm:MSMEG_5373 nitrilase 2; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase 2690401 10364381 Psed_2545 Pseudonocardia dioxanivorans CB1190 nitrilase YP_004332601.1 2689352 R 675635 CDS YP_004332602.1 331696363 10364382 complement(2690403..2691836) 1 NC_015312.1 PFAM: Glutamine synthetase, catalytic domain; KEGG: msm:MSMEG_5374 glutamate--ammonia ligase; glutamine synthetase catalytic subunit 2691836 10364382 Psed_2546 Pseudonocardia dioxanivorans CB1190 glutamine synthetase catalytic subunit YP_004332602.1 2690403 R 675635 CDS YP_004332603.1 331696364 10364383 complement(2691887..2692363) 1 NC_015312.1 PFAM: Protein of unknown function DUF1097; KEGG: vei:Veis_4948 glutathione-regulated potassium-efflux system protein; hypothetical protein 2692363 10364383 Psed_2547 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332603.1 2691887 R 675635 CDS YP_004332604.1 331696365 10364384 2692695..2693435 1 NC_015312.1 KEGG: msm:MSMEG_5375 GntR-family protein transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2693435 10364384 Psed_2548 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332604.1 2692695 D 675635 CDS YP_004332605.1 331696366 10364385 complement(2693456..2694838) 1 NC_015312.1 TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: rop:ROP_15050 L-serine dehydratase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; L-serine dehydratase 1 2694838 10364385 Psed_2549 Pseudonocardia dioxanivorans CB1190 L-serine dehydratase 1 YP_004332605.1 2693456 R 675635 CDS YP_004332606.1 331696367 10364386 complement(2694845..2696134) 1 NC_015312.1 KEGG: rop:ROP_26570 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 2696134 10364386 Psed_2550 Pseudonocardia dioxanivorans CB1190 glycine hydroxymethyltransferase YP_004332606.1 2694845 R 675635 CDS YP_004332607.1 331696368 10364387 complement(2696140..2696538) 1 NC_015312.1 TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: mmi:MMAR_0209 glycine cleavage system H protein GcvH_1; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein 2696538 10364387 Psed_2551 Pseudonocardia dioxanivorans CB1190 glycine cleavage system H protein YP_004332607.1 2696140 R 675635 CDS YP_004332608.1 331696369 10364388 complement(2696572..2697684) 1 NC_015312.1 PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: rop:ROP_26550 glycine cleavage system aminomethyltransferase T; glycine cleavage system protein T 2697684 10364388 Psed_2552 Pseudonocardia dioxanivorans CB1190 glycine cleavage system protein T YP_004332608.1 2696572 R 675635 CDS YP_004332609.1 331696370 10364389 complement(2697681..2700524) 1 NC_015312.1 TIGRFAM: Glycine cleavage system P protein, homodimeric; HAMAP: Glycine cleavage system P protein, homodimeric; KEGG: rop:ROP_26540 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; Aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase 2700524 10364389 Psed_2553 Pseudonocardia dioxanivorans CB1190 glycine dehydrogenase YP_004332609.1 2697681 R 675635 CDS YP_004332610.1 331696371 10364390 complement(2701322..2703172) 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: ami:Amir_3695 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 2703172 10364390 Psed_2554 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004332610.1 2701322 R 675635 CDS YP_004332611.1 331696372 10364391 2703401..2704021 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_C0598 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2704021 10364391 Psed_2555 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004332611.1 2703401 D 675635 CDS YP_004332612.1 331696373 10364392 2704018..2704818 1 NC_015312.1 KEGG: lch:Lcho_1200 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2704818 10364392 Psed_2556 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332612.1 2704018 D 675635 CDS YP_004332613.1 331696374 10364393 2704815..2705741 1 NC_015312.1 PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: cyj:Cyan7822_4323 hypothetical protein; hypothetical protein 2705741 10364393 Psed_2557 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332613.1 2704815 D 675635 CDS YP_004332614.1 331696375 10364394 complement(2705876..2706946) 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: bur:Bcep18194_C7583 cytochrome P450-like; cytochrome P450 2706946 10364394 Psed_2558 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004332614.1 2705876 R 675635 CDS YP_004332615.1 331696376 10364395 complement(2706943..2709300) 1 NC_015312.1 KEGG: fre:Franean1_4699 carbon-monoxide dehydrogenase (acceptor); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 2709300 10364395 Psed_2559 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332615.1 2706943 R 675635 CDS YP_004332616.1 331696377 10364396 complement(2709300..2709809) 1 NC_015312.1 KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 2709809 10364396 Psed_2560 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332616.1 2709300 R 675635 CDS YP_004332617.1 331696378 10364397 complement(2709806..2710681) 1 NC_015312.1 KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 2710681 10364397 Psed_2561 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332617.1 2709806 R 675635 CDS YP_004332618.1 331696379 10364398 2710872..2711720 1 NC_015312.1 KEGG: bxe:Bxe_A3609 hypothetical protein; hypothetical protein 2711720 10364398 Psed_2562 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332618.1 2710872 D 675635 CDS YP_004332619.1 331696380 10364399 2711717..2712376 1 NC_015312.1 KEGG: etr:ETAE_0966 hypothetical protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 2712376 10364399 Psed_2563 Pseudonocardia dioxanivorans CB1190 ethyl tert-butyl ether degradation EthD YP_004332619.1 2711717 D 675635 CDS YP_004332620.1 331696381 10364400 complement(2712355..2712900) 1 NC_015312.1 KEGG: tfu:Tfu_1296 hypothetical protein; hypothetical protein 2712900 10364400 Psed_2564 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332620.1 2712355 R 675635 CDS YP_004332621.1 331696382 10364401 2712974..2713729 1 NC_015312.1 KEGG: tfu:Tfu_1299 dihydroxynaphthoic acid synthase; PFAM: Crotonase, core; naphthoate synthase 2713729 10364401 Psed_2565 Pseudonocardia dioxanivorans CB1190 naphthoate synthase YP_004332621.1 2712974 D 675635 CDS YP_004332622.1 331696383 10364402 2713726..2715357 1 NC_015312.1 KEGG: tfu:Tfu_1300 DitJ-like CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 2715357 10364402 Psed_2566 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004332622.1 2713726 D 675635 CDS YP_004332623.1 331696384 10364403 complement(2715433..2717019) 1 NC_015312.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: htu:Htur_3820 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2717019 10364403 Psed_2567 Pseudonocardia dioxanivorans CB1190 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004332623.1 2715433 R 675635 CDS YP_004332624.1 331696385 10364404 complement(2717037..2718242) 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A2750 branched chain amino acid ABC transporter periplasmic ligand-binding protein; ABC transporter substrate-binding protein 2718242 10364404 Psed_2568 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332624.1 2717037 R 675635 CDS YP_004332625.1 331696386 10364405 2718442..2719353 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: sth:STH802 branched-chain amino acid ABC transporter permease; ABC transporter permease 2719353 10364405 Psed_2569 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332625.1 2718442 D 675635 CDS YP_004332626.1 331696387 10364406 2719350..2721230 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter permease; KEGG: sti:Sthe_2800 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 2721230 10364406 Psed_2570 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004332626.1 2719350 D 675635 CDS YP_004332627.1 331696388 10364407 2721220..2721945 1 NC_015312.1 KEGG: cwo:Cwoe_0429 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2721945 10364407 Psed_2571 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004332627.1 2721220 D 675635 CDS YP_004332628.1 331696389 10364408 2722028..2723209 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: cti:RALTA_A1580 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase); PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 2723209 10364408 Psed_2572 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004332628.1 2722028 D 675635 CDS YP_004332629.1 331696390 10364409 2723223..2723987 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_5155 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 2723987 10364409 Psed_2573 Pseudonocardia dioxanivorans CB1190 3-hydroxy-2-methylbutyryl-CoA dehydrogenase YP_004332629.1 2723223 D 675635 CDS YP_004332630.1 331696391 10364410 2723984..2724790 1 NC_015312.1 PFAM: Crotonase, core; KEGG: gob:Gobs_2232 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 2724790 10364410 Psed_2574 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332630.1 2723984 D 675635 CDS YP_004332631.1 331696392 10364411 complement(2724843..2725970) 1 NC_015312.1 KEGG: tfu:Tfu_1282 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 2725970 10364411 Psed_2575 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004332631.1 2724843 R 675635 CDS YP_004332632.1 331696393 10364412 2726101..2726859 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: sjp:SJA_C1-02580 hypothetical protein; carboxymuconolactone decarboxylase 2726859 10364412 Psed_2576 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004332632.1 2726101 D 675635 CDS YP_004332633.1 331696394 10364413 2727076..2727849 1 NC_015312.1 KEGG: tfu:Tfu_1277 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2727849 10364413 Psed_2577 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332633.1 2727076 D 675635 CDS YP_004332634.1 331696395 10364414 2728070..2728939 1 NC_015312.1 KEGG: bxe:Bxe_A3609 hypothetical protein; hypothetical protein 2728939 10364414 Psed_2578 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332634.1 2728070 D 675635 CDS YP_004332635.1 331696396 10364415 2728944..2729357 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: amd:AMED_3868 hypothetical protein; hypothetical protein 2729357 10364415 Psed_2579 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332635.1 2728944 D 675635 CDS YP_004332636.1 331696397 10364416 2729354..2730511 1 NC_015312.1 KEGG: amd:AMED_3867 hypothetical protein; hypothetical protein 2730511 10364416 Psed_2580 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332636.1 2729354 D 675635 CDS YP_004332637.1 331696398 10364417 2730529..2731671 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: rlt:Rleg2_6338 amidohydrolase 2; amidohydrolase 2731671 10364417 Psed_2581 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004332637.1 2730529 D 675635 CDS YP_004332638.1 331696399 10364418 2731664..2732059 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gym:GYMC10_1269 Rieske (2Fe-2S) iron-sulphur domain protein; Rieske (2Fe-2S) domain-containing protein 2732059 10364418 Psed_2582 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004332638.1 2731664 D 675635 CDS YP_004332639.1 331696400 10364419 2732075..2733625 1 NC_015312.1 KEGG: msp:Mspyr1_07630 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2733625 10364419 Psed_2583 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004332639.1 2732075 D 675635 CDS YP_004332640.1 331696401 10364420 2733625..2734374 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tfu:Tfu_1298 2-deoxy-D-gluconate 3-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 2734374 10364420 Psed_2584 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332640.1 2733625 D 675635 CDS YP_004332641.1 331696402 10364421 2734371..2735150 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: tfu:Tfu_1297 amidohydrolase protein; amidohydrolase 2735150 10364421 Psed_2585 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004332641.1 2734371 D 675635 CDS YP_004332642.1 331696403 10364422 2735168..2735929 1 NC_015312.1 KEGG: aac:Aaci_2398 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2735929 10364422 Psed_2586 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332642.1 2735168 D 675635 CDS YP_004332643.1 331696404 10364423 complement(2735883..2737199) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rxy:Rxyl_2414 major facilitator transporter; major facilitator superfamily protein 2737199 10364423 Psed_2587 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332643.1 2735883 R 675635 CDS YP_004332644.1 331696405 10364424 2737343..2738584 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: jan:Jann_2272 cytochrome P450-like; cytochrome P450 2738584 10364424 Psed_2588 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004332644.1 2737343 D 675635 CDS YP_004332645.1 331696406 10364425 2738644..2739873 1 NC_015312.1 KEGG: fri:FraEuI1c_1873 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 2739873 10364425 Psed_2589 Pseudonocardia dioxanivorans CB1190 linalool 8-monooxygenase YP_004332645.1 2738644 D 675635 CDS YP_004332646.1 331696407 10364426 2739891..2740685 1 NC_015312.1 KEGG: tfu:Tfu_1466 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2740685 10364426 Psed_2590 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332646.1 2739891 D 675635 CDS YP_004332647.1 331696408 10364427 2740823..2741266 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cwo:Cwoe_1024 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2741266 10364427 Psed_2591 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004332647.1 2740823 D 675635 CDS YP_004332648.1 331696409 10364428 2741281..2741469 1 NC_015312.1 KEGG: fal:FRAAL3396 hypothetical protein; hypothetical protein 2741469 10364428 Psed_2592 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332648.1 2741281 D 675635 CDS YP_004332649.1 331696410 10364429 2741558..2743192 1 NC_015312.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: art:Arth_2287 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2743192 10364429 Psed_2593 Pseudonocardia dioxanivorans CB1190 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004332649.1 2741558 D 675635 CDS YP_004332650.1 331696411 10364430 complement(2743239..2744240) 1 NC_015312.1 KEGG: ttr:Tter_2008 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; L-iditol 2-dehydrogenase 2744240 10364430 Psed_2594 Pseudonocardia dioxanivorans CB1190 L-iditol 2-dehydrogenase YP_004332650.1 2743239 R 675635 CDS YP_004332651.1 331696412 10364431 complement(2744243..2745046) 1 NC_015312.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: nar:Saro_3491 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 2745046 10364431 Psed_2595 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004332651.1 2744243 R 675635 CDS YP_004332652.1 331696413 10364432 complement(2745105..2746049) 1 NC_015312.1 TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: afw:Anae109_2380 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; 2-dehydropantoate 2-reductase 2746049 10364432 Psed_2596 Pseudonocardia dioxanivorans CB1190 2-dehydropantoate 2-reductase YP_004332652.1 2745105 R 675635 CDS YP_004332653.1 331696414 10364433 2746216..2746971 1 NC_015312.1 PFAM: Class II aldolase/adducin, N-terminal; KEGG: req:REQ_06410 aldolase; class II aldolase/adducin family protein 2746971 10364433 Psed_2597 Pseudonocardia dioxanivorans CB1190 class II aldolase/adducin family protein YP_004332653.1 2746216 D 675635 CDS YP_004332654.1 331696415 10364434 2747068..2748291 1 NC_015312.1 KEGG: rle:RL3578 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase 2748291 10364434 Psed_2598 Pseudonocardia dioxanivorans CB1190 (S)-2-hydroxy-acid oxidase YP_004332654.1 2747068 D 675635 CDS YP_004332655.1 331696416 10364435 2748399..2749607 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: reh:H16_A3293 ABC-type transporter, periplasmic component; ABC transporter substrate-binding protein 2749607 10364435 Psed_2599 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332655.1 2748399 D 675635 CDS YP_004332656.1 331696417 10364436 2749672..2750535 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: sth:STH802 branched-chain amino acid ABC transporter permease; ABC transporter permease 2750535 10364436 Psed_2600 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332656.1 2749672 D 675635 CDS YP_004332657.1 331696418 10364437 2750528..2751649 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: bxe:Bxe_A2754 branched chain amino acid ABC transporter inner membrane protein; ABC transporter permease 2751649 10364437 Psed_2601 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332657.1 2750528 D 675635 CDS YP_004332658.1 331696419 10364438 2751649..2752479 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: tcu:Tcur_2856 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 2752479 10364438 Psed_2602 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004332658.1 2751649 D 675635 CDS YP_004332659.1 331696420 10364439 2752463..2753167 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: mil:ML5_3917 abc transporter related protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 2753167 10364439 Psed_2603 Pseudonocardia dioxanivorans CB1190 Fe(3+)-transporting ATPase YP_004332659.1 2752463 D 675635 CDS YP_004332660.1 331696421 10364440 2753190..2753762 1 NC_015312.1 hypothetical protein 2753762 10364440 Psed_2604 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332660.1 2753190 D 675635 CDS YP_004332661.1 331696422 10364441 2753797..2754591 1 NC_015312.1 KEGG: jan:Jann_2271 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2754591 10364441 Psed_2605 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332661.1 2753797 D 675635 CDS YP_004332662.1 331696423 10364442 2754588..2755349 1 NC_015312.1 KEGG: jan:Jann_2269 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2755349 10364442 Psed_2606 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332662.1 2754588 D 675635 CDS YP_004332663.1 331696424 10364443 2755362..2755823 1 NC_015312.1 KEGG: amd:AMED_7167 hypothetical protein; hypothetical protein 2755823 10364443 Psed_2607 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332663.1 2755362 D 675635 CDS YP_004332664.1 331696425 10364444 2755820..2757280 1 NC_015312.1 KEGG: nca:Noca_0203 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; succinate dehydrogenase 2757280 10364444 Psed_2608 Pseudonocardia dioxanivorans CB1190 succinate dehydrogenase YP_004332664.1 2755820 D 675635 CDS YP_004332665.1 331696426 10364445 2757277..2758182 1 NC_015312.1 PFAM: Transcription regulator TrmB, N-terminal; KEGG: sro:Sros_2039 helix-turn-helix family DUF118; transcriptional regulator TrmB 2758182 10364445 Psed_2609 Pseudonocardia dioxanivorans CB1190 transcriptional regulator TrmB YP_004332665.1 2757277 D 675635 CDS YP_004332666.1 331696427 10364446 complement(2758387..2759784) 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: gob:Gobs_3863 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2759784 10364446 Psed_2610 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004332666.1 2758387 R 675635 CDS YP_004332667.1 331696428 10364447 complement(2759812..2762043) 1 NC_015312.1 KEGG: tcu:Tcur_2984 AAA ATPase; ATPase AAA 2762043 10364447 Psed_2611 Pseudonocardia dioxanivorans CB1190 ATPase AAA YP_004332667.1 2759812 R 675635 CDS YP_004332668.1 331696429 10364448 2762067..2763755 1 NC_015312.1 PFAM: Uncharacterised conserved protein UCP007542; KEGG: nml:Namu_4958 hypothetical protein; hypothetical protein 2763755 10364448 Psed_2612 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332668.1 2762067 D 675635 CDS YP_004332669.1 331696430 10364449 complement(2763763..2764596) 1 NC_015312.1 KEGG: amd:AMED_5870 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase; coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase 2764596 10364449 Psed_2613 Pseudonocardia dioxanivorans CB1190 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase YP_004332669.1 2763763 R 675635 CDS YP_004332670.1 331696431 10364450 2764758..2765246 1 NC_015312.1 KEGG: fri:FraEuI1c_4693 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 2765246 10364450 Psed_2614 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004332670.1 2764758 D 675635 CDS YP_004332671.1 331696432 10364451 complement(2765269..2765829) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sma:SAV_4701 TetR family transcriptional regulator; TetR family transcriptional regulator 2765829 10364451 Psed_2615 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332671.1 2765269 R 675635 CDS YP_004332672.1 331696433 10364452 2765956..2767602 1 NC_015312.1 KEGG: sco:SCO3366 exporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 2767602 10364452 Psed_2616 Pseudonocardia dioxanivorans CB1190 EmrB/QacA subfamily drug resistance transporter YP_004332672.1 2765956 D 675635 CDS YP_004332673.1 331696434 10364453 complement(2767665..2767880) 1 NC_015312.1 PFAM: Ferredoxin soy-like; KEGG: ami:Amir_1960 protein of unknown function DUF1271; hypothetical protein 2767880 10364453 Psed_2617 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332673.1 2767665 R 675635 CDS YP_004332674.1 331696435 10364454 complement(2767877..2769091) 1 NC_015312.1 KEGG: ami:Amir_1961 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 2769091 10364454 Psed_2618 Pseudonocardia dioxanivorans CB1190 linalool 8-monooxygenase YP_004332674.1 2767877 R 675635 CDS YP_004332675.1 331696436 10364455 complement(2769211..2770746) 1 NC_015312.1 KEGG: nfa:nfa30980 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2770746 10364455 Psed_2619 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004332675.1 2769211 R 675635 CDS YP_004332676.1 331696437 10364456 complement(2770808..2772130) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mno:Mnod_2777 major facilitator superfamily MFS_1; major facilitator superfamily protein 2772130 10364456 Psed_2620 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332676.1 2770808 R 675635 CDS YP_004332677.1 331696438 10364457 complement(2772127..2772846) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: bxe:Bxe_B2809 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 2772846 10364457 Psed_2621 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332677.1 2772127 R 675635 CDS YP_004332678.1 331696439 10364458 complement(2772853..2774160) 1 NC_015312.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: bxe:Bxe_B2810 nitrilotriacetate monooxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 2774160 10364458 Psed_2622 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004332678.1 2772853 R 675635 CDS YP_004332679.1 331696440 10364459 complement(2774164..2775327) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_B2811 luciferase-like monooxygenase; luciferase-like protein 2775327 10364459 Psed_2623 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004332679.1 2774164 R 675635 CDS YP_004332680.1 331696441 10364460 complement(2775324..2775998) 1 NC_015312.1 PFAM: cyclase; KEGG: fal:FRAAL6390 hypothetical protein; cyclase 2775998 10364460 Psed_2624 Pseudonocardia dioxanivorans CB1190 cyclase YP_004332680.1 2775324 R 675635 CDS YP_004332681.1 331696442 10364461 complement(2775998..2776918) 1 NC_015312.1 PFAM: Dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B2813 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2776918 10364461 Psed_2625 Pseudonocardia dioxanivorans CB1190 dihydrodipicolinate synthetase YP_004332681.1 2775998 R 675635 CDS YP_004332682.1 331696443 10364462 2777320..2777979 1 NC_015312.1 KEGG: rha:RHA1_ro00274 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2777979 10364462 Psed_2626 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332682.1 2777320 D 675635 CDS YP_004332683.1 331696444 10364463 2778079..2778576 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 2778576 10364463 Psed_2627 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004332683.1 2778079 D 675635 CDS YP_004332684.1 331696445 10364464 complement(2778646..2779083) 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_1481 anti-sigma-factor antagonist; sulfate transporter/antisigma-factor antagonist STAS 2779083 10364464 Psed_2628 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004332684.1 2778646 R 675635 CDS YP_004332685.1 331696446 10364465 complement(2779325..2779783) 1 NC_015312.1 KEGG: mil:ML5_4830 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 2779783 10364465 Psed_2629 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004332685.1 2779325 R 675635 CDS YP_004332686.1 331696447 10364466 2779875..2781677 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: mil:ML5_4831 abc transporter related protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 2781677 10364466 Psed_2630 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004332686.1 2779875 D 675635 CDS YP_004332687.1 331696448 10364467 2781730..2782809 1 NC_015312.1 KEGG: amd:AMED_4291 DNA topoisomerase IB; DNA topoisomerase IB 2782809 10364467 Psed_2631 Pseudonocardia dioxanivorans CB1190 DNA topoisomerase IB YP_004332687.1 2781730 D 675635 CDS YP_004332688.1 331696449 10364468 complement(2782912..2783463) 1 NC_015312.1 KEGG: nda:Ndas_2013 intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI; Pfpi family intracellular protease 2783463 10364468 Psed_2632 Pseudonocardia dioxanivorans CB1190 Pfpi family intracellular protease YP_004332688.1 2782912 R 675635 CDS YP_004332689.1 331696450 10364469 complement(2783505..2784683) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: rha:RHA1_ro10318 acetyl-CoA C-acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 2784683 10364469 Psed_2633 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004332689.1 2783505 R 675635 CDS YP_004332690.1 331696451 10364470 2784824..2786929 1 NC_015312.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Glycogen debranching enzyme; KEGG: ace:Acel_1372 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; glycogen debranching protein GlgX 2786929 10364470 Psed_2634 Pseudonocardia dioxanivorans CB1190 glycogen debranching protein GlgX YP_004332690.1 2784824 D 675635 CDS YP_004332691.1 331696452 10364471 2787016..2787600 1 NC_015312.1 KEGG: gob:Gobs_0834 phage SPO1 DNA polymerase-like protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; phage SPO1 DNA polymerase-like protein 2787600 10364471 Psed_2635 Pseudonocardia dioxanivorans CB1190 phage SPO1 DNA polymerase-like protein YP_004332691.1 2787016 D 675635 CDS YP_004332692.1 331696453 10364472 complement(2787608..2787832) 1 NC_015312.1 hypothetical protein 2787832 10364472 Psed_2636 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332692.1 2787608 R 675635 CDS YP_004332693.1 331696454 10364473 complement(2787903..2790215) 1 NC_015312.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: sro:Sros_3960 serine/threonine protein kinase-like protein; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 2790215 10364473 Psed_2637 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004332693.1 2787903 R 675635 CDS YP_004332694.1 331696455 10364474 2790384..2791217 1 NC_015312.1 KEGG: ske:Sked_14980 hypothetical protein; TIGRFAM: Polyphosphate kinase 2, PA0141; PFAM: Polyphosphate kinase-2-related; polyphosphate kinase 2791217 10364474 Psed_2638 Pseudonocardia dioxanivorans CB1190 polyphosphate kinase YP_004332694.1 2790384 D 675635 CDS YP_004332695.1 331696456 10364475 complement(2791233..2792180) 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: cwo:Cwoe_3024 transcriptional regulator, LysR family; LysR family transcriptional regulator 2792180 10364475 Psed_2639 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004332695.1 2791233 R 675635 CDS YP_004332696.1 331696457 10364476 2792509..2792811 1 NC_015312.1 hypothetical protein 2792811 10364476 Psed_2640 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332696.1 2792509 D 675635 CDS YP_004332697.1 331696458 10364477 2792867..2793736 1 NC_015312.1 KEGG: nca:Noca_0239 ATPase; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 2793736 10364477 Psed_2641 Pseudonocardia dioxanivorans CB1190 ATPase YP_004332697.1 2792867 D 675635 CDS YP_004332698.1 331696459 10364478 2793738..2794862 1 NC_015312.1 KEGG: nca:Noca_0238 VWA containing CoxE family protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A; von Willebrand factor A 2794862 10364478 Psed_2642 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004332698.1 2793738 D 675635 CDS YP_004332699.1 331696460 10364479 2794872..2795159 1 NC_015312.1 hypothetical protein 2795159 10364479 Psed_2643 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332699.1 2794872 D 675635 CDS YP_004332700.1 331696461 10364480 2795156..2795530 1 NC_015312.1 KEGG: nca:Noca_0237 hypothetical protein; hypothetical protein 2795530 10364480 Psed_2644 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332700.1 2795156 D 675635 CDS YP_004332701.1 331696462 10364481 2795666..2796616 1 NC_015312.1 KEGG: rop:ROP_41430 hypothetical protein; hypothetical protein 2796616 10364481 Psed_2645 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332701.1 2795666 D 675635 CDS YP_004332702.1 331696463 10364482 complement(2796658..2796999) 1 NC_015312.1 KEGG: nca:Noca_0236 hypothetical protein; hypothetical protein 2796999 10364482 Psed_2646 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332702.1 2796658 R 675635 CDS YP_004332703.1 331696464 10364483 complement(2796996..2797295) 1 NC_015312.1 KEGG: nca:Noca_0235 hypothetical protein; hypothetical protein 2797295 10364483 Psed_2647 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332703.1 2796996 R 675635 CDS YP_004332704.1 331696465 10364484 complement(2797297..2797521) 1 NC_015312.1 KEGG: nca:Noca_0234 hypothetical protein; hypothetical protein 2797521 10364484 Psed_2648 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332704.1 2797297 R 675635 CDS YP_004332705.1 331696466 10364485 complement(2797543..2797770) 1 NC_015312.1 hypothetical protein 2797770 10364485 Psed_2649 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332705.1 2797543 R 675635 CDS YP_004332706.1 331696467 10364486 complement(2797770..2798042) 1 NC_015312.1 KEGG: nca:Noca_0233 hypothetical protein; hypothetical protein 2798042 10364486 Psed_2650 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332706.1 2797770 R 675635 CDS YP_004332707.1 331696468 10364487 complement(2798056..2798637) 1 NC_015312.1 PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: nca:Noca_0232 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 2798637 10364487 Psed_2651 Pseudonocardia dioxanivorans CB1190 carbon monoxide dehydrogenase subunit G YP_004332707.1 2798056 R 675635 CDS YP_004332708.1 331696469 10364488 complement(2798641..2801052) 1 NC_015312.1 TIGRFAM: Carbon-monoxide dehydrogenase, large subunit; KEGG: nca:Noca_0230 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase large subunit 2801052 10364488 Psed_2652 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase large subunit YP_004332708.1 2798641 R 675635 CDS YP_004332709.1 331696470 10364489 complement(2801049..2801564) 1 NC_015312.1 KEGG: nca:Noca_0229 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 2801564 10364489 Psed_2653 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332709.1 2801049 R 675635 CDS YP_004332710.1 331696471 10364490 complement(2801576..2802451) 1 NC_015312.1 KEGG: nca:Noca_0228 molybdopterin dehydrogenase, FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 2802451 10364490 Psed_2654 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332710.1 2801576 R 675635 CDS YP_004332711.1 331696472 10364491 complement(2802451..2802729) 1 NC_015312.1 KEGG: nca:Noca_0227 hypothetical protein; hypothetical protein 2802729 10364491 Psed_2655 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332711.1 2802451 R 675635 CDS YP_004332712.1 331696473 10364492 2802915..2803811 1 NC_015312.1 KEGG: nml:Namu_5284 molybdopterin dehydrogenase FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 2803811 10364492 Psed_2656 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332712.1 2802915 D 675635 CDS YP_004332713.1 331696474 10364493 2803820..2804287 1 NC_015312.1 KEGG: mkm:Mkms_0501 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 2804287 10364493 Psed_2657 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004332713.1 2803820 D 675635 CDS YP_004332714.1 331696475 10364494 2804284..2806692 1 NC_015312.1 TIGRFAM: Carbon-monoxide dehydrogenase, large subunit; KEGG: nml:Namu_5287 carbon-monoxide dehydrogenase large subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase large subunit 2806692 10364494 Psed_2658 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase large subunit YP_004332714.1 2804284 D 675635 CDS YP_004332715.1 331696476 10364495 2806701..2807618 1 NC_015312.1 PFAM: XdhC- CoxI; YHS; KEGG: art:Arth_2038 hypothetical protein; XshC-Cox1-family protein 2807618 10364495 Psed_2659 Pseudonocardia dioxanivorans CB1190 XshC-Cox1-family protein YP_004332715.1 2806701 D 675635 CDS YP_004332716.1 331696477 10364496 complement(2807637..2808365) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0256 transcriptional regulator, TetR family; TetR family transcriptional regulator 2808365 10364496 Psed_2660 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332716.1 2807637 R 675635 CDS YP_004332717.1 331696478 10364497 complement(2808409..2810007) 1 NC_015312.1 KEGG: tcu:Tcur_1972 EmrB/QacA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 2810007 10364497 Psed_2661 Pseudonocardia dioxanivorans CB1190 EmrB/QacA subfamily drug resistance transporter YP_004332717.1 2808409 R 675635 CDS YP_004332718.1 331696479 10364498 complement(2810095..2811684) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nml:Namu_4792 major facilitator superfamily protein; major facilitator superfamily protein 2811684 10364498 Psed_2662 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332718.1 2810095 R 675635 CDS YP_004332719.1 331696480 10364499 complement(2811787..2812500) 1 NC_015312.1 KEGG: fri:FraEuI1c_2609 peptidase M24; peptidase M24 2812500 10364499 Psed_2663 Pseudonocardia dioxanivorans CB1190 peptidase M24 YP_004332719.1 2811787 R 675635 CDS YP_004332720.1 331696481 10364500 complement(2812536..2813225) 1 NC_015312.1 KEGG: sen:SACE_2965 haloacid dehalogenase-like hydrolase; haloacid dehalogenase 2813225 10364500 Psed_2664 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004332720.1 2812536 R 675635 CDS YP_004332721.1 331696482 10364502 complement(2813923..2815173) 1 NC_015312.1 KEGG: aoe:Clos_0876 formyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 2815173 10364502 Psed_2666 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004332721.1 2813923 R 675635 CDS YP_004332722.1 331696483 10364503 2815291..2817351 1 NC_015312.1 KEGG: rer:RER_34970 CdaR family transcriptional regulator; PFAM: GAF; SMART: GAF; GAF domain-containing protein 2817351 10364503 Psed_2667 Pseudonocardia dioxanivorans CB1190 GAF domain-containing protein YP_004332722.1 2815291 D 675635 CDS YP_004332723.1 331696484 10364504 2817580..2817831 1 NC_015312.1 hypothetical protein 2817831 10364504 Psed_2668 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332723.1 2817580 D 675635 CDS YP_004332724.1 331696485 10364505 2817860..2819896 1 NC_015312.1 KEGG: sti:Sthe_2892 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 2819896 10364505 Psed_2669 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004332724.1 2817860 D 675635 CDS YP_004332725.1 331696486 10364506 2819908..2821875 1 NC_015312.1 KEGG: sti:Sthe_3498 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 2821875 10364506 Psed_2670 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004332725.1 2819908 D 675635 CDS YP_004332726.1 331696487 10364507 complement(2822049..2822831) 1 NC_015312.1 KEGG: bxe:Bxe_C0850 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2822831 10364507 Psed_2671 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332726.1 2822049 R 675635 CDS YP_004332727.1 331696488 10364508 2822995..2824512 1 NC_015312.1 KEGG: amd:AMED_7123 fatty-acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2824512 10364508 Psed_2672 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004332727.1 2822995 D 675635 CDS YP_004332728.1 331696489 10364509 complement(2824493..2825188) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_7223 TetR family transcriptional regulator; TetR family transcriptional regulator 2825188 10364509 Psed_2673 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332728.1 2824493 R 675635 CDS YP_004332729.1 331696490 10364510 2825383..2826132 1 NC_015312.1 KEGG: sta:STHERM_c04220 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2826132 10364510 Psed_2674 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332729.1 2825383 D 675635 CDS YP_004332730.1 331696491 10364511 2826141..2826890 1 NC_015312.1 KEGG: fri:FraEuI1c_5330 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2826890 10364511 Psed_2675 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332730.1 2826141 D 675635 CDS YP_004332731.1 331696492 10364512 2826906..2827739 1 NC_015312.1 PFAM: Crotonase, core; KEGG: axy:AXYL_00935 3-hydroxybutyryl-CoA dehydratase 1; enoyl-CoA hydratase 2827739 10364512 Psed_2676 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332731.1 2826906 D 675635 CDS YP_004332732.1 331696493 10364513 2827838..2829808 1 NC_015312.1 KEGG: rop:ROP_25260 flavin-containing monooxygenase; 4-hydroxyacetophenone monooxygenase 2829808 10364513 Psed_2677 Pseudonocardia dioxanivorans CB1190 4-hydroxyacetophenone monooxygenase YP_004332732.1 2827838 D 675635 CDS YP_004332733.1 331696494 10364514 2829962..2830543 1 NC_015312.1 PFAM: Domain of unknown function DUF151; KEGG: gob:Gobs_2724 hypothetical protein; hypothetical protein 2830543 10364514 Psed_2678 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332733.1 2829962 D 675635 CDS YP_004332734.1 331696495 10364515 complement(2830540..2831907) 1 NC_015312.1 KEGG: amd:AMED_5223 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase (ubiquinone) 2831907 10364515 Psed_2679 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (ubiquinone) YP_004332734.1 2830540 R 675635 CDS YP_004332735.1 331696496 10364516 complement(2832116..2833537) 1 NC_015312.1 KEGG: ske:Sked_35010 selenocysteine lyase; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase 2833537 10364516 Psed_2680 Pseudonocardia dioxanivorans CB1190 cysteine desulfurase YP_004332735.1 2832116 R 675635 CDS YP_004332736.1 331696497 10364517 complement(2833769..2834932) 1 NC_015312.1 KEGG: fal:FRAAL4450 monomeric sarcosine oxidase (MSOX); PFAM: FAD dependent oxidoreductase; sarcosine oxidase 2834932 10364517 Psed_2681 Pseudonocardia dioxanivorans CB1190 sarcosine oxidase YP_004332736.1 2833769 R 675635 CDS YP_004332737.1 331696498 10364518 2835039..2836154 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: req:REQ_02210 alpha/beta hydrolase; alpha/beta hydrolase 2836154 10364518 Psed_2682 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004332737.1 2835039 D 675635 CDS YP_004332738.1 331696499 10364519 2836331..2837281 1 NC_015312.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: sen:SACE_3449 gluconolactonase precursor; SMP-30/Gluconolaconase/LRE-like region-containing protein 2837281 10364519 Psed_2683 Pseudonocardia dioxanivorans CB1190 SMP-30/Gluconolaconase/LRE-like region-containing protein YP_004332738.1 2836331 D 675635 CDS YP_004332739.1 331696500 10364520 2837374..2838132 1 NC_015312.1 KEGG: cag:Cagg_2751 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2838132 10364520 Psed_2684 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332739.1 2837374 D 675635 CDS YP_004332740.1 331696501 10364521 2838290..2839903 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_6256 extracellular solute-binding protein; ABC transporter substrate-binding protein 2839903 10364521 Psed_2685 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332740.1 2838290 D 675635 CDS YP_004332741.1 331696502 10364522 2839900..2840820 1 NC_015312.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: sen:SACE_3449 gluconolactonase precursor; SMP-30/Gluconolaconase/LRE-like region-containing protein 2840820 10364522 Psed_2686 Pseudonocardia dioxanivorans CB1190 SMP-30/Gluconolaconase/LRE-like region-containing protein YP_004332741.1 2839900 D 675635 CDS YP_004332742.1 331696503 10364524 2842197..2843396 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_0863 major facilitator transporter; major facilitator superfamily protein 2843396 10364524 Psed_2688 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332742.1 2842197 D 675635 CDS YP_004332743.1 331696504 10364525 complement(2843440..2844450) 1 NC_015312.1 TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG2256, predicted; KEGG: fal:FRAAL4774 N5,N10-methylenetetrahydromethanopterin reductase-related protein; F420-dependent oxidoreductase 2844450 10364525 Psed_2689 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004332743.1 2843440 R 675635 CDS YP_004332744.1 331696505 10364526 2844666..2845448 1 NC_015312.1 PFAM: DSBA-like thioredoxin domain; KEGG: svi:Svir_07810 protein-disulfide isomerase; DSBA oxidoreductase 2845448 10364526 Psed_2690 Pseudonocardia dioxanivorans CB1190 DSBA oxidoreductase YP_004332744.1 2844666 D 675635 CDS YP_004332745.1 331696506 10364527 2845513..2846808 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: amd:AMED_3426 cytochrome P450; cytochrome P450 2846808 10364527 Psed_2691 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004332745.1 2845513 D 675635 CDS YP_004332746.1 331696507 10364528 complement(2846772..2847824) 1 NC_015312.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kfl:Kfla_5208 endonuclease/exonuclease/phosphatase; hypothetical protein 2847824 10364528 Psed_2692 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332746.1 2846772 R 675635 CDS YP_004332747.1 331696508 10364529 complement(2847974..2848630) 1 NC_015312.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: msp:Mspyr1_02660 dinucleotide-binding enzyme; coenzyme F420-dependent NADP oxidoreductase 2848630 10364529 Psed_2693 Pseudonocardia dioxanivorans CB1190 coenzyme F420-dependent NADP oxidoreductase YP_004332747.1 2847974 R 675635 CDS YP_004332748.1 331696509 10364530 complement(2848752..2849207) 1 NC_015312.1 PFAM: Protein of unknown function DUF1348; KEGG: amd:AMED_1643 hypothetical protein; hypothetical protein 2849207 10364530 Psed_2694 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332748.1 2848752 R 675635 CDS YP_004332749.1 331696510 10364531 2849303..2849875 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sma:SAV_7471 TetR family transcriptional regulator; TetR family transcriptional regulator 2849875 10364531 Psed_2695 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332749.1 2849303 D 675635 CDS YP_004332750.1 331696511 10364532 complement(2849961..2851286) 1 NC_015312.1 TIGRFAM: Phenylacetate-CoA ligase; KEGG: gob:Gobs_1908 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; phenylacetate-CoA ligase 2851286 10364532 Psed_2696 Pseudonocardia dioxanivorans CB1190 phenylacetate-CoA ligase YP_004332750.1 2849961 R 675635 CDS YP_004332751.1 331696512 10364533 complement(2851283..2853340) 1 NC_015312.1 TIGRFAM: Phenylacetic acid degradation protein PaaN; KEGG: amd:AMED_1563 phenylacetic acid degradation protein PaaZ; PFAM: MaoC-like dehydratase; Aldehyde dehydrogenase domain; phenylacetic acid degradation protein paaN 2853340 10364533 Psed_2697 Pseudonocardia dioxanivorans CB1190 phenylacetic acid degradation protein paaN YP_004332751.1 2851283 R 675635 CDS YP_004332752.1 331696513 10364534 2853523..2854317 1 NC_015312.1 PFAM: Crotonase, core; KEGG: sgr:SGR_2381 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 2854317 10364534 Psed_2698 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004332752.1 2853523 D 675635 CDS YP_004332753.1 331696514 10364535 2854314..2854937 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: scb:SCAB_45331 transcriptional regulator; TetR family transcriptional regulator 2854937 10364535 Psed_2699 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332753.1 2854314 D 675635 CDS YP_004332754.1 331696515 10364536 2855071..2856030 1 NC_015312.1 KEGG: sen:SACE_3544 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: Phenylacetate-CoA oxygenase, PaaG subunit; PFAM: Phenylacetic acid catabolic; phenylacetate-CoA oxygenase subunit PaaG 2856030 10364536 Psed_2700 Pseudonocardia dioxanivorans CB1190 phenylacetate-CoA oxygenase subunit PaaG YP_004332754.1 2855071 D 675635 CDS YP_004332755.1 331696516 10364537 2856027..2856374 1 NC_015312.1 KEGG: sen:SACE_3545 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: Phenylacetic acid degradation B; PFAM: Phenylacetic acid degradation B; phenylacetate-CoA oxygenase subunit PaaH 2856374 10364537 Psed_2701 Pseudonocardia dioxanivorans CB1190 phenylacetate-CoA oxygenase subunit PaaH YP_004332755.1 2856027 D 675635 CDS YP_004332756.1 331696517 10364538 2856409..2857323 1 NC_015312.1 KEGG: sen:SACE_3546 phenylacetic acid degradation protein; TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit; PFAM: Phenylacetic acid catabolic; phenylacetate-CoA oxygenase subunit PaaI 2857323 10364538 Psed_2702 Pseudonocardia dioxanivorans CB1190 phenylacetate-CoA oxygenase subunit PaaI YP_004332756.1 2856409 D 675635 CDS YP_004332757.1 331696518 10364539 2857317..2857826 1 NC_015312.1 KEGG: sen:SACE_3547 phenylacetic acid degradation protein; TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: Domain of unknown function DUF59; phenylacetate-CoA oxygenase subunit PaaJ 2857826 10364539 Psed_2703 Pseudonocardia dioxanivorans CB1190 phenylacetate-CoA oxygenase subunit PaaJ YP_004332757.1 2857317 D 675635 CDS YP_004332758.1 331696519 10364540 2857829..2858923 1 NC_015312.1 TIGRFAM: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: sen:SACE_3548 phenylacetic acid degradation NADH oxidoreductase; PFAM: Ferredoxin; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; phenylacetate-CoA oxygenase/reductase subunit PaaK 2858923 10364540 Psed_2704 Pseudonocardia dioxanivorans CB1190 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_004332758.1 2857829 D 675635 CDS YP_004332759.1 331696520 10364541 2859076..2859798 1 NC_015312.1 KEGG: hmg:100208015 hypothetical protein LOC100208015; hypothetical protein 2859798 10364541 Psed_2705 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332759.1 2859076 D 675635 CDS YP_004332760.1 331696521 10364542 2860052..2861206 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: gob:Gobs_0263 major facilitator superfamily protein; major facilitator superfamily protein 2861206 10364542 Psed_2706 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332760.1 2860052 D 675635 CDS YP_004332761.1 331696522 10364543 2861322..2862221 1 NC_015312.1 PFAM: Aldose 1-epimerase; KEGG: sen:SACE_0644 aldose-1-epimerase; aldose-1-epimerase 2862221 10364543 Psed_2707 Pseudonocardia dioxanivorans CB1190 aldose-1-epimerase YP_004332761.1 2861322 D 675635 CDS YP_004332762.1 331696523 10364544 2862297..2863082 1 NC_015312.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase; KEGG: fra:Francci3_2657 precorrin 6A synthase; PFAM: Tetrapyrrole methylase; precorrin-6A synthase 2863082 10364544 Psed_2708 Pseudonocardia dioxanivorans CB1190 precorrin-6A synthase YP_004332762.1 2862297 D 675635 CDS YP_004332763.1 331696524 10364545 2863188..2864438 1 NC_015312.1 KEGG: amd:AMED_6303 metal ion transporter, Nramp family; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter 2864438 10364545 Psed_2709 Pseudonocardia dioxanivorans CB1190 NRAMP family Mn2+/Fe2+ transporter YP_004332763.1 2863188 D 675635 CDS YP_004332764.1 331696525 10364546 2864642..2865112 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; KEGG: ami:Amir_5361 anti-sigma regulatory factor, serine/threonine protein kinase; ATP-binding protein 2865112 10364546 Psed_2710 Pseudonocardia dioxanivorans CB1190 ATP-binding protein YP_004332764.1 2864642 D 675635 CDS YP_004332765.1 331696526 10364547 complement(2865088..2865723) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_7022 TetR family transcriptional regulator; TetR family transcriptional regulator 2865723 10364547 Psed_2711 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332765.1 2865088 R 675635 CDS YP_004332766.1 331696527 10364548 2866249..2866890 1 NC_015312.1 KEGG: rop:ROP_18570 hypothetical protein; hypothetical protein 2866890 10364548 Psed_2712 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332766.1 2866249 D 675635 CDS YP_004332767.1 331696528 10364549 2866929..2867369 1 NC_015312.1 PFAM: Ferric-uptake regulator; KEGG: mil:ML5_4698 ferric uptake regulator, fur family; Fur family ferric uptake regulator 2867369 10364549 Psed_2713 Pseudonocardia dioxanivorans CB1190 Fur family ferric uptake regulator YP_004332767.1 2866929 D 675635 CDS YP_004332768.1 331696529 10364550 2867366..2869693 1 NC_015312.1 PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: amd:AMED_4105 catalase/peroxidase; catalase-peroxidase 2869693 10364550 Psed_2714 Pseudonocardia dioxanivorans CB1190 catalase-peroxidase YP_004332768.1 2867366 D 675635 CDS YP_004332769.1 331696530 10364551 complement(2869770..2870180) 1 NC_015312.1 PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: amd:AMED_0264 sporulation and cell division protein SsgA; sporulation and cell division protein SsgA 2870180 10364551 Psed_2715 Pseudonocardia dioxanivorans CB1190 sporulation and cell division protein SsgA YP_004332769.1 2869770 R 675635 CDS YP_004332770.1 331696531 10364552 complement(2870324..2870851) 1 NC_015312.1 KEGG: ami:Amir_4443 acyl transferase; acyl transferase 2870851 10364552 Psed_2716 Pseudonocardia dioxanivorans CB1190 acyl transferase YP_004332770.1 2870324 R 675635 CDS YP_004332771.1 331696532 10364553 2871122..2872804 1 NC_015312.1 KEGG: sen:SACE_3902 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; butyrate--CoA ligase 2872804 10364553 Psed_2717 Pseudonocardia dioxanivorans CB1190 butyrate--CoA ligase YP_004332771.1 2871122 D 675635 CDS YP_004332772.1 331696533 10364554 complement(2872868..2873317) 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: nfa:nfa41690 hypothetical protein; hypothetical protein 2873317 10364554 Psed_2718 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332772.1 2872868 R 675635 CDS YP_004332773.1 331696534 10364555 complement(2873415..2874050) 1 NC_015312.1 KEGG: kfl:Kfla_0937 flavin reductase domain protein FMN-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 2874050 10364555 Psed_2719 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004332773.1 2873415 R 675635 CDS YP_004332774.1 331696535 10364556 2874112..2875101 1 NC_015312.1 TIGRFAM: Cobalamin biosynthesis CobD/CbiB; HAMAP: Cobalamin biosynthesis CobD/CbiB; KEGG: nml:Namu_0174 cobalamin biosynthesis protein CobD; PFAM: Cobalamin biosynthesis CobD/CbiB; cobalamin biosynthesis protein CbiB 2875101 10364556 Psed_2720 Pseudonocardia dioxanivorans CB1190 cobalamin biosynthesis protein CbiB YP_004332774.1 2874112 D 675635 CDS YP_004332775.1 331696536 10364557 complement(2875112..2876092) 1 NC_015312.1 KEGG: sen:SACE_1577 hypothetical protein; hypothetical protein 2876092 10364557 Psed_2721 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332775.1 2875112 R 675635 CDS YP_004332776.1 331696537 10364558 2876136..2877722 1 NC_015312.1 TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: ami:Amir_5883 cobyric acid synthase CobQ; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase; cobyric acid synthase 2877722 10364558 Psed_2722 Pseudonocardia dioxanivorans CB1190 cobyric acid synthase YP_004332776.1 2876136 D 675635 CDS YP_004332777.1 331696538 10364559 2877719..2879986 1 NC_015312.1 PFAM: von Willebrand factor, type A; ATPase, AAA-5; KEGG: sen:SACE_5965 magnesium-chelatase subunit; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core; magnesium chelatase 2879986 10364559 Psed_2723 Pseudonocardia dioxanivorans CB1190 magnesium chelatase YP_004332777.1 2877719 D 675635 CDS YP_004332778.1 331696539 10364560 2880010..2880624 1 NC_015312.1 TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: amd:AMED_7053 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase 2880624 10364560 Psed_2724 Pseudonocardia dioxanivorans CB1190 cob(I)alamin adenosyltransferase YP_004332778.1 2880010 D 675635 CDS YP_004332779.1 331696540 10364561 2880632..2881969 1 NC_015312.1 TIGRFAM: Cobyrinic acid a,c-diamide synthase CbiA; HAMAP: Cobyrinic acid a,c-diamide synthase CbiA; KEGG: ami:Amir_5859 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase; cobyrinic acid A,C-diamide synthase 2881969 10364561 Psed_2725 Pseudonocardia dioxanivorans CB1190 cobyrinic acid A,C-diamide synthase YP_004332779.1 2880632 D 675635 CDS YP_004332780.1 331696541 10364562 2881969..2882358 1 NC_015312.1 PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; KEGG: tcu:Tcur_1317 precorrin-3B C17-methyltransferase; cobalamin (vitamin B12) biosynthesis protein CbiG 2882358 10364562 Psed_2726 Pseudonocardia dioxanivorans CB1190 cobalamin (vitamin B12) biosynthesis protein CbiG YP_004332780.1 2881969 D 675635 CDS YP_004332781.1 331696542 10364563 2882664..2883875 1 NC_015312.1 KEGG: nfa:nfa40770 uroporphyrinogen III methylase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; PFAM: Tetrapyrrole methylase; uroporphyrin-III C-methyltransferase 2883875 10364563 Psed_2727 Pseudonocardia dioxanivorans CB1190 uroporphyrin-III C-methyltransferase YP_004332781.1 2882664 D 675635 CDS YP_004332782.1 331696543 10364565 2884665..2885141 1 NC_015312.1 hypothetical protein 2885141 10364565 Psed_2729 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332782.1 2884665 D 675635 CDS YP_004332783.1 331696544 10364566 2885138..2886883 1 NC_015312.1 TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic; Cob(II)yrinic acid a,c-diamide reductase; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic; KEGG: sma:SAV_6795 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like; Nitroreductase-like; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2886883 10364566 Psed_2730 Pseudonocardia dioxanivorans CB1190 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_004332783.1 2885138 D 675635 CDS YP_004332784.1 331696545 10364567 complement(2886996..2888321) 1 NC_015312.1 HAMAP: DNA polymerase IV; KEGG: sen:SACE_6234 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV 2888321 10364567 Psed_2731 Pseudonocardia dioxanivorans CB1190 DNA polymerase IV YP_004332784.1 2886996 R 675635 CDS YP_004332785.1 331696546 10364568 complement(2888403..2888960) 1 NC_015312.1 PFAM: DSBA-like thioredoxin domain; KEGG: nml:Namu_0894 DsbA oxidoreductase; DSBA oxidoreductase 2888960 10364568 Psed_2732 Pseudonocardia dioxanivorans CB1190 DSBA oxidoreductase YP_004332785.1 2888403 R 675635 CDS YP_004332786.1 331696547 10364569 2888994..2890334 1 NC_015312.1 TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: gob:Gobs_1802 cyclic nucleotide-binding protein; PFAM: Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter NhaA 2890334 10364569 Psed_2733 Pseudonocardia dioxanivorans CB1190 Na(+)/H(+) antiporter NhaA YP_004332786.1 2888994 D 675635 CDS YP_004332787.1 331696548 10364570 2890510..2891748 1 NC_015312.1 KEGG: mpt:Mpe_A2676 acetyl-coenzyme A dehydrogenase, medium chain; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; butyryl-CoA dehydrogenase 2891748 10364570 Psed_2734 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004332787.1 2890510 D 675635 CDS YP_004332788.1 331696549 10364571 2891848..2892450 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_1946 TetR family transcriptional regulator; TetR family transcriptional regulator 2892450 10364571 Psed_2735 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332788.1 2891848 D 675635 CDS YP_004332789.1 331696550 10364572 2892447..2893127 1 NC_015312.1 KEGG: amd:AMED_1945 hypothetical protein; hypothetical protein 2893127 10364572 Psed_2736 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332789.1 2892447 D 675635 CDS YP_004332790.1 331696551 10364573 2893120..2894484 1 NC_015312.1 KEGG: amd:AMED_1944 FAD-dependent oxidoreductase; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 2894484 10364573 Psed_2737 Pseudonocardia dioxanivorans CB1190 pentachlorophenol monooxygenase YP_004332790.1 2893120 D 675635 CDS YP_004332791.1 331696552 10364574 complement(2894509..2895258) 1 NC_015312.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: kfl:Kfla_4144 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 2895258 10364574 Psed_2738 Pseudonocardia dioxanivorans CB1190 4'-phosphopantetheinyl transferase YP_004332791.1 2894509 R 675635 CDS YP_004332792.1 331696553 10364575 2895847..2897028 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: azl:AZL_c00540 FAD-dependent oxidoreductase; FAD dependent oxidoreductase 2897028 10364575 Psed_2739 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004332792.1 2895847 D 675635 CDS YP_004332793.1 331696554 10364576 2897076..2898338 1 NC_015312.1 KEGG: gob:Gobs_4206 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 2898338 10364576 Psed_2740 Pseudonocardia dioxanivorans CB1190 linalool 8-monooxygenase YP_004332793.1 2897076 D 675635 CDS YP_004332794.1 331696555 10364577 complement(2898292..2898918) 1 NC_015312.1 SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: rer:RER_52840 3-oxoadipate CoA-transferase beta subunit; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 2898918 10364577 Psed_2741 Pseudonocardia dioxanivorans CB1190 3-oxoacid CoA-transferase subunit B YP_004332794.1 2898292 R 675635 CDS YP_004332795.1 331696556 10364578 complement(2898918..2899688) 1 NC_015312.1 SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: req:REQ_33550 3-oxoadipate CoA-transferase ScoA; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 2899688 10364578 Psed_2742 Pseudonocardia dioxanivorans CB1190 3-oxoacid CoA-transferase subunit A YP_004332795.1 2898918 R 675635 CDS YP_004332796.1 331696557 10364579 complement(2899792..2900463) 1 NC_015312.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: cmi:CMM_2866 hydrolase; haloacid dehalogenase 2900463 10364579 Psed_2743 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004332796.1 2899792 R 675635 CDS YP_004332797.1 331696558 10364580 complement(2900506..2901288) 1 NC_015312.1 KEGG: fri:FraEuI1c_1424 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2901288 10364580 Psed_2744 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004332797.1 2900506 R 675635 CDS YP_004332798.1 331696559 10364581 2901419..2901793 1 NC_015312.1 KEGG: fri:FraEuI1c_1425 hypothetical protein; hypothetical protein 2901793 10364581 Psed_2745 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332798.1 2901419 D 675635 CDS YP_004332799.1 331696560 10364582 2901855..2902997 1 NC_015312.1 KEGG: rer:RER_52880 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: Lyase 1, N-terminal; 3-carboxy-cis,cis-muconate cycloisomerase 2902997 10364582 Psed_2746 Pseudonocardia dioxanivorans CB1190 3-carboxy-cis,cis-muconate cycloisomerase YP_004332799.1 2901855 D 675635 CDS YP_004332800.1 331696561 10364583 2902994..2903773 1 NC_015312.1 TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: req:REQ_33600 IclR family transcriptional regulator; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 2903773 10364583 Psed_2747 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004332800.1 2902994 D 675635 CDS YP_004332801.1 331696562 10364584 2903830..2904894 1 NC_015312.1 KEGG: cwo:Cwoe_0286 hypothetical protein; hypothetical protein 2904894 10364584 Psed_2748 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332801.1 2903830 D 675635 CDS YP_004332802.1 331696563 10364585 complement(2905045..2905272) 1 NC_015312.1 hypothetical protein 2905272 10364585 Psed_2749 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332802.1 2905045 R 675635 CDS YP_004332803.1 331696564 10364586 2905357..2906346 1 NC_015312.1 KEGG: sen:SACE_4209 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 2906346 10364586 Psed_2750 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004332803.1 2905357 D 675635 CDS YP_004332804.1 331696565 10364587 2906454..2907824 1 NC_015312.1 KEGG: mrb:Mrub_3035 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; ferredoxin-NADP reductase 2907824 10364587 Psed_2751 Pseudonocardia dioxanivorans CB1190 ferredoxin-NADP reductase YP_004332804.1 2906454 D 675635 CDS YP_004332805.1 331696566 10364588 complement(2908010..2908282) 1 NC_015312.1 hypothetical protein 2908282 10364588 Psed_2752 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332805.1 2908010 R 675635 CDS YP_004332806.1 331696567 10364589 2908634..2909419 1 NC_015312.1 KEGG: amd:AMED_3870 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2909419 10364589 Psed_2753 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332806.1 2908634 D 675635 CDS YP_004332807.1 331696568 10364590 complement(2909544..2911229) 1 NC_015312.1 PFAM: Cytochrome b/b6, N-terminal; KEGG: ami:Amir_1376 cytochrome b/b6 domain protein; cytochrome b/b6 domain-containing protein 2911229 10364590 Psed_2754 Pseudonocardia dioxanivorans CB1190 cytochrome b/b6 domain-containing protein YP_004332807.1 2909544 R 675635 CDS YP_004332808.1 331696569 10364591 complement(2911226..2912362) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: sen:SACE_1686 ubiquinol-cytochrome c reductase iron-sulfur subunit; Rieske (2Fe-2S) domain-containing protein 2912362 10364591 Psed_2755 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004332808.1 2911226 R 675635 CDS YP_004332809.1 331696570 10364592 complement(2912359..2913219) 1 NC_015312.1 PFAM: Cytochrome c, class I; KEGG: amd:AMED_2201 ubiquinol-cytochrome c reductase cytochrome c subunit; cytochrome c class I 2913219 10364592 Psed_2756 Pseudonocardia dioxanivorans CB1190 cytochrome c class I YP_004332809.1 2912359 R 675635 CDS YP_004332810.1 331696571 10364593 complement(2913272..2913874) 1 NC_015312.1 KEGG: mjl:Mjls_3302 cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III; cytochrome-c oxidase 2913874 10364593 Psed_2757 Pseudonocardia dioxanivorans CB1190 cytochrome-c oxidase YP_004332810.1 2913272 R 675635 CDS YP_004332811.1 331696572 10364594 2913983..2914531 1 NC_015312.1 KEGG: ami:Amir_1371 response regulator receiver protein; hypothetical protein 2914531 10364594 Psed_2758 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332811.1 2913983 D 675635 CDS YP_004332812.1 331696573 10364595 2914524..2915636 1 NC_015312.1 PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: sen:SACE_1681 anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 2915636 10364595 Psed_2759 Pseudonocardia dioxanivorans CB1190 anthranilate phosphoribosyltransferase YP_004332812.1 2914524 D 675635 CDS YP_004332813.1 331696574 10364596 complement(2915690..2915968) 1 NC_015312.1 PFAM: Transcription regulator AsnC-type, C-terminal; KEGG: svi:Svir_10710 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2915968 10364596 Psed_2760 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004332813.1 2915690 R 675635 CDS YP_004332814.1 331696575 10364597 complement(2916026..2917786) 1 NC_015312.1 SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: sen:SACE_1689 hypothetical protein; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon 2917786 10364597 Psed_2761 Pseudonocardia dioxanivorans CB1190 DNA polymerase III subunit epsilon YP_004332814.1 2916026 R 675635 CDS YP_004332815.1 331696576 10364598 2918169..2919566 1 NC_015312.1 PFAM: Protein of unknown function DUF901; KEGG: ami:Amir_1379 protein of unknown function DUF901; hypothetical protein 2919566 10364598 Psed_2762 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332815.1 2918169 D 675635 CDS YP_004332816.1 331696577 10364599 2919674..2919931 1 NC_015312.1 KEGG: fri:FraEuI1c_1805 hypothetical protein; hypothetical protein 2919931 10364599 Psed_2763 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332816.1 2919674 D 675635 CDS YP_004332817.1 331696578 10364600 2920226..2921320 1 NC_015312.1 PFAM: NLP/P60; KEGG: amd:AMED_5872 NLP/P60-family protein; NLP/P60 protein 2921320 10364600 Psed_2764 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004332817.1 2920226 D 675635 CDS YP_004332818.1 331696579 10364601 2921475..2922638 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: req:REQ_28150 glycosyl transferase 1; group 1 glycosyl transferase 2922638 10364601 Psed_2765 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004332818.1 2921475 D 675635 CDS YP_004332819.1 331696580 10364602 complement(2922680..2924491) 1 NC_015312.1 KEGG: sen:SACE_1694 long-chain fatty acid ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 2924491 10364602 Psed_2766 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004332819.1 2922680 R 675635 CDS YP_004332820.1 331696581 10364603 2924624..2925205 1 NC_015312.1 KEGG: amd:AMED_2446 hypothetical protein; hypothetical protein 2925205 10364603 Psed_2767 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332820.1 2924624 D 675635 CDS YP_004332821.1 331696582 10364604 2925260..2926048 1 NC_015312.1 PFAM: Metallo-dependent phosphatase; KEGG: amd:AMED_2447 metallophosphoesterase; metallophosphoesterase 2926048 10364604 Psed_2768 Pseudonocardia dioxanivorans CB1190 metallophosphoesterase YP_004332821.1 2925260 D 675635 CDS YP_004332822.1 331696583 10364605 2926086..2926520 1 NC_015312.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: amd:AMED_2448 cyclase/dehydrase; cyclase 2926520 10364605 Psed_2769 Pseudonocardia dioxanivorans CB1190 cyclase YP_004332822.1 2926086 D 675635 CDS YP_004332823.1 331696584 10364606 2926540..2927814 1 NC_015312.1 KEGG: sen:SACE_1698 arsenite-transporting ATPase; arsenite-transporting ATPase 2927814 10364606 Psed_2770 Pseudonocardia dioxanivorans CB1190 arsenite-transporting ATPase YP_004332823.1 2926540 D 675635 CDS YP_004332824.1 331696585 10364607 2927811..2928230 1 NC_015312.1 KEGG: ami:Amir_1388 hypothetical protein; hypothetical protein 2928230 10364607 Psed_2771 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332824.1 2927811 D 675635 CDS YP_004332825.1 331696586 10364608 2928227..2929225 1 NC_015312.1 KEGG: ami:Amir_1389 ROK family protein; PFAM: ROK; glucokinase 2929225 10364608 Psed_2772 Pseudonocardia dioxanivorans CB1190 glucokinase YP_004332825.1 2928227 D 675635 CDS YP_004332826.1 331696587 10364609 complement(2929281..2929814) 1 NC_015312.1 KEGG: sen:SACE_1701 hypothetical protein; hypothetical protein 2929814 10364609 Psed_2773 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332826.1 2929281 R 675635 CDS YP_004332827.1 331696588 10364610 2930054..2930770 1 NC_015312.1 KEGG: sen:SACE_1702 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2930770 10364610 Psed_2774 Pseudonocardia dioxanivorans CB1190 phospholipid/glycerol acyltransferase YP_004332827.1 2930054 D 675635 CDS YP_004332828.1 331696589 10364611 2930784..2931806 1 NC_015312.1 KEGG: rpe:RPE_3904 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 2931806 10364611 Psed_2775 Pseudonocardia dioxanivorans CB1190 anti-sigma regulatory factor YP_004332828.1 2930784 D 675635 CDS YP_004332829.1 331696590 10364612 2932071..2932559 1 NC_015312.1 KEGG: svi:Svir_24810 hypothetical protein; hypothetical protein 2932559 10364612 Psed_2776 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332829.1 2932071 D 675635 CDS YP_004332830.1 331696591 10364613 complement(2932618..2932776) 1 NC_015312.1 KEGG: gob:Gobs_4779 hypothetical protein; hypothetical protein 2932776 10364613 Psed_2777 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332830.1 2932618 R 675635 CDS YP_004332831.1 331696592 10364614 2932925..2934313 1 NC_015312.1 TIGRFAM: DAHP synthetase, class II; KEGG: ami:Amir_1395 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; phospho-2-dehydro-3-deoxyheptonate aldolase 2934313 10364614 Psed_2778 Pseudonocardia dioxanivorans CB1190 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004332831.1 2932925 D 675635 CDS YP_004332832.1 331696593 10364615 complement(2934345..2936102) 1 NC_015312.1 PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: nml:Namu_3222 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; PASTA; serine/threonine protein kinase with PASTA sensor(s) 2936102 10364615 Psed_2779 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase with PASTA sensor(s) YP_004332832.1 2934345 R 675635 CDS YP_004332833.1 331696594 10364616 2936245..2936610 1 NC_015312.1 KEGG: sen:SACE_1711 transcriptional regulatory protein; transcriptional regulatory protein 2936610 10364616 Psed_2780 Pseudonocardia dioxanivorans CB1190 transcriptional regulatory protein YP_004332833.1 2936245 D 675635 CDS YP_004332834.1 331696595 10364617 complement(2936579..2937589) 1 NC_015312.1 KEGG: ami:Amir_3811 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; phytoene synthase 2937589 10364617 Psed_2781 Pseudonocardia dioxanivorans CB1190 phytoene synthase YP_004332834.1 2936579 R 675635 CDS YP_004332835.1 331696596 10364618 complement(2937567..2939324) 1 NC_015312.1 KEGG: ami:Amir_1398 hypothetical protein; hypothetical protein 2939324 10364618 Psed_2782 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332835.1 2937567 R 675635 CDS YP_004332836.1 331696597 10364619 complement(2939341..2940939) 1 NC_015312.1 KEGG: sen:SACE_1713 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase; phytoene desaturase 2940939 10364619 Psed_2783 Pseudonocardia dioxanivorans CB1190 phytoene desaturase YP_004332836.1 2939341 R 675635 CDS YP_004332837.1 331696598 10364620 complement(2940936..2942147) 1 NC_015312.1 KEGG: svi:Svir_27930 geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Geranyltranstransferase 2942147 10364620 Psed_2784 Pseudonocardia dioxanivorans CB1190 Geranyltranstransferase YP_004332837.1 2940936 R 675635 CDS YP_004332838.1 331696599 10364621 2942303..2943205 1 NC_015312.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: sen:SACE_1715 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2943205 10364621 Psed_2785 Pseudonocardia dioxanivorans CB1190 5,10-methylenetetrahydrofolate reductase YP_004332838.1 2942303 D 675635 CDS YP_004332839.1 331696600 10364622 complement(2943301..2943993) 1 NC_015312.1 KEGG: ami:Amir_1403 hypothetical protein; hypothetical protein 2943993 10364622 Psed_2786 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332839.1 2943301 R 675635 CDS YP_004332840.1 331696601 10364623 complement(2944045..2944659) 1 NC_015312.1 KEGG: amd:AMED_2329 hypothetical protein; hypothetical protein 2944659 10364623 Psed_2787 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332840.1 2944045 R 675635 CDS YP_004332841.1 331696602 10364624 2944769..2945056 1 NC_015312.1 hypothetical protein 2945056 10364624 Psed_2788 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332841.1 2944769 D 675635 CDS YP_004332842.1 331696603 10364625 2945050..2945370 1 NC_015312.1 hypothetical protein 2945370 10364625 Psed_2789 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332842.1 2945050 D 675635 CDS YP_004332843.1 331696604 10364626 2945367..2945504 1 NC_015312.1 hypothetical protein 2945504 10364626 Psed_2790 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332843.1 2945367 D 675635 CDS YP_004332844.1 331696605 10364627 2945504..2946202 1 NC_015312.1 KEGG: stp:Strop_3242 hypothetical protein; hypothetical protein 2946202 10364627 Psed_2791 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332844.1 2945504 D 675635 CDS YP_004332845.1 331696606 10364628 complement(2946205..2947092) 1 NC_015312.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sen:SACE_5874 plasmid partitioning protein; Cobyrinic acid ac-diamide synthase 2947092 10364628 Psed_2792 Pseudonocardia dioxanivorans CB1190 Cobyrinic acid ac-diamide synthase YP_004332845.1 2946205 R 675635 CDS YP_004332846.1 331696607 10364629 2947193..2947900 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: ami:Amir_5788 methyltransferase type 12; type 12 methyltransferase 2947900 10364629 Psed_2793 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004332846.1 2947193 D 675635 CDS YP_004332847.1 331696608 10364630 2948280..2948669 1 NC_015312.1 KEGG: msp:Mspyr1_23110 hypothetical protein; hypothetical protein 2948669 10364630 Psed_2794 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332847.1 2948280 D 675635 CDS YP_004332848.1 331696609 10364631 complement(2948620..2951118) 1 NC_015312.1 KEGG: sen:SACE_5871 transglutaminase-like; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; transglutaminase domain-containing protein 2951118 10364631 Psed_2795 Pseudonocardia dioxanivorans CB1190 transglutaminase domain-containing protein YP_004332848.1 2948620 R 675635 CDS YP_004332849.1 331696610 10364632 complement(2951115..2952413) 1 NC_015312.1 PFAM: Domain of unknown function DUF58; KEGG: ami:Amir_5777 protein of unknown function DUF58; hypothetical protein 2952413 10364632 Psed_2796 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332849.1 2951115 R 675635 CDS YP_004332850.1 331696611 10364633 complement(2952419..2953444) 1 NC_015312.1 PFAM: ATPase, AAA-3; KEGG: ami:Amir_5776 ATPase associated with various cellular activities AAA_3; ATPase 2953444 10364633 Psed_2797 Pseudonocardia dioxanivorans CB1190 ATPase YP_004332850.1 2952419 R 675635 CDS YP_004332851.1 331696612 10364634 2953889..2954320 1 NC_015312.1 TIGRFAM: MraZ; HAMAP: MraZ; KEGG: amd:AMED_6261 MraZ protein; PFAM: MraZ domain; protein mraZ 2954320 10364634 Psed_2798 Pseudonocardia dioxanivorans CB1190 protein mraZ YP_004332851.1 2953889 D 675635 CDS YP_004332852.1 331696613 10364635 2954574..2955554 1 NC_015312.1 TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: sen:SACE_5866 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; ribosomal RNA small subunit methyltransferase H 2955554 10364635 Psed_2799 Pseudonocardia dioxanivorans CB1190 ribosomal RNA small subunit methyltransferase H YP_004332852.1 2954574 D 675635 CDS YP_004332853.1 331696614 10364636 2955634..2958420 1 NC_015312.1 PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sen:SACE_5864 penicillin-binding (cell division related) protein; penicillin-binding protein transpeptidase 2958420 10364636 Psed_2800 Pseudonocardia dioxanivorans CB1190 penicillin-binding protein transpeptidase YP_004332853.1 2955634 D 675635 CDS YP_004332854.1 331696615 10364637 2958771..2960276 1 NC_015312.1 PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: tpr:Tpau_2651 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 2960276 10364637 Psed_2801 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_004332854.1 2958771 D 675635 CDS YP_004332855.1 331696616 10364638 2960273..2961739 1 NC_015312.1 TIGRFAM: UDP-MurNAc-pentapeptide synthetase; KEGG: ami:Amir_5770 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 2961739 10364638 Psed_2802 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_004332855.1 2960273 D 675635 CDS YP_004332856.1 331696617 10364639 2961736..2962806 1 NC_015312.1 TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: ami:Amir_5769 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 2962806 10364639 Psed_2803 Pseudonocardia dioxanivorans CB1190 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004332856.1 2961736 D 675635 CDS YP_004332857.1 331696618 10364640 2962806..2964203 1 NC_015312.1 PFAM: Mur ligase, central; Alcohol dehydrogenase, C-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: ami:Amir_5768 UDP-N-acetylmuramoylalanine/D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 2964203 10364640 Psed_2804 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004332857.1 2962806 D 675635 CDS YP_004332858.1 331696619 10364641 2964200..2965573 1 NC_015312.1 KEGG: sen:SACE_5852 cell division membrane protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 2965573 10364641 Psed_2805 Pseudonocardia dioxanivorans CB1190 cell division protein FtsW YP_004332858.1 2964200 D 675635 CDS YP_004332859.1 331696620 10364642 2965570..2966655 1 NC_015312.1 TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: N-acetylglucosaminyltransferase, MurG; KEGG: ami:Amir_5763 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 2966655 10364642 Psed_2806 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_004332859.1 2965570 D 675635 CDS YP_004332860.1 331696621 10364643 2966652..2968082 1 NC_015312.1 PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: ami:Amir_5762 UDP-N-acetylmuramate--L-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 2968082 10364643 Psed_2807 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylmuramate--L-alanine ligase YP_004332860.1 2966652 D 675635 CDS YP_004332861.1 331696622 10364644 2968079..2969461 1 NC_015312.1 PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: mjl:Mjls_3265 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 2969461 10364644 Psed_2808 Pseudonocardia dioxanivorans CB1190 polypeptide-transport-associated domain-containing protein YP_004332861.1 2968079 D 675635 CDS YP_004332862.1 331696623 10364645 2969634..2971082 1 NC_015312.1 TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: sen:SACE_5835 cell division GTPase; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 2971082 10364645 Psed_2809 Pseudonocardia dioxanivorans CB1190 cell division protein FtsZ YP_004332862.1 2969634 D 675635 CDS YP_004332863.1 331696624 10364646 2971122..2971823 1 NC_015312.1 KEGG: svi:Svir_27360 conserved hypothetical protein TIGR00726; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; multi-copper polyphenol oxidoreductase, laccase 2971823 10364646 Psed_2810 Pseudonocardia dioxanivorans CB1190 multi-copper polyphenol oxidoreductase, laccase YP_004332863.1 2971122 D 675635 CDS YP_004332864.1 331696625 10364647 2972309..2973049 1 NC_015312.1 KEGG: mau:Micau_4469 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein 2973049 10364647 Psed_2811 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332864.1 2972309 D 675635 CDS YP_004332865.1 331696626 10364648 2973104..2973850 1 NC_015312.1 KEGG: ami:Amir_5757 protein of unknown function DUF552; HAMAP: Cell division protein SepF; PFAM: Cell division protein SepF/SepF-related; cell division protein sepF 2973850 10364648 Psed_2812 Pseudonocardia dioxanivorans CB1190 cell division protein sepF YP_004332865.1 2973104 D 675635 CDS YP_004332866.1 331696627 10364649 2973854..2974141 1 NC_015312.1 PFAM: Uncharacterised protein family Ycf19; KEGG: svi:Svir_27330 YGGT family protein; hypothetical protein 2974141 10364649 Psed_2813 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332866.1 2973854 D 675635 CDS YP_004332867.1 331696628 10364650 2974188..2975048 1 NC_015312.1 KEGG: sen:SACE_5830 cell division initiation protein; TIGRFAM: DivIVA domain; PFAM: DivIVA; DivIVA domain-containing protein 2975048 10364650 Psed_2814 Pseudonocardia dioxanivorans CB1190 DivIVA domain-containing protein YP_004332867.1 2974188 D 675635 CDS YP_004332868.1 331696629 10364651 2975113..2976855 1 NC_015312.1 KEGG: rci:RRC32 hypothetical protein; hypothetical protein 2976855 10364651 Psed_2815 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332868.1 2975113 D 675635 CDS YP_004332869.1 331696630 10364652 2977218..2980508 1 NC_015312.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase, class Ia; KEGG: sen:SACE_5828 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 2980508 10364652 Psed_2816 Pseudonocardia dioxanivorans CB1190 isoleucyl-tRNA synthetase YP_004332869.1 2977218 D 675635 CDS YP_004332870.1 331696631 10364653 complement(2980709..2981338) 1 NC_015312.1 PFAM: SNARE associated Golgi protein; KEGG: amd:AMED_6495 DedA-like membrane protein; hypothetical protein 2981338 10364653 Psed_2817 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332870.1 2980709 R 675635 CDS YP_004332871.1 331696632 10364654 2981491..2982303 1 NC_015312.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: mil:ML5_2013 abc transport system permease; hypothetical protein 2982303 10364654 Psed_2818 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332871.1 2981491 D 675635 CDS YP_004332872.1 331696633 10364655 2982300..2983058 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: tcu:Tcur_3103 type 12 methyltransferase; type 12 methyltransferase 2983058 10364655 Psed_2819 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004332872.1 2982300 D 675635 CDS YP_004332873.1 331696634 10364656 complement(2983065..2983886) 1 NC_015312.1 KEGG: nml:Namu_3868 hypothetical protein; hypothetical protein 2983886 10364656 Psed_2820 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332873.1 2983065 R 675635 CDS YP_004332874.1 331696635 10364657 complement(2983886..2984560) 1 NC_015312.1 KEGG: sma:SAV_4878 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2984560 10364657 Psed_2821 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332874.1 2983886 R 675635 CDS YP_004332875.1 331696636 10364658 complement(2984557..2985864) 1 NC_015312.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: sma:SAV_4879 two-component system sensor kinase; histidine kinase 2985864 10364658 Psed_2822 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004332875.1 2984557 R 675635 CDS YP_004332876.1 331696637 10364659 complement(2986112..2986846) 1 NC_015312.1 PFAM: Abortive infection protein; KEGG: nml:Namu_5061 abortive infection protein; abortive infection protein 2986846 10364659 Psed_2823 Pseudonocardia dioxanivorans CB1190 abortive infection protein YP_004332876.1 2986112 R 675635 CDS YP_004332877.1 331696638 10364660 2986918..2988096 1 NC_015312.1 KEGG: nml:Namu_5060 hypothetical protein; hypothetical protein 2988096 10364660 Psed_2824 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332877.1 2986918 D 675635 CDS YP_004332878.1 331696639 10364661 2988195..2989712 1 NC_015312.1 PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; KEGG: ami:Amir_5749 potassium/proton antiporter; sodium/hydrogen exchanger 2989712 10364661 Psed_2825 Pseudonocardia dioxanivorans CB1190 sodium/hydrogen exchanger YP_004332878.1 2988195 D 675635 CDS YP_004332879.1 331696640 10364662 2989831..2990769 1 NC_015312.1 KEGG: sen:SACE_5823 ribosomal large subunit pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; RluA family pseudouridine synthase 2990769 10364662 Psed_2826 Pseudonocardia dioxanivorans CB1190 RluA family pseudouridine synthase YP_004332879.1 2989831 D 675635 CDS YP_004332880.1 331696641 10364663 2990780..2991460 1 NC_015312.1 KEGG: req:REQ_27610 protein; hypothetical protein 2991460 10364663 Psed_2827 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332880.1 2990780 D 675635 CDS YP_004332881.1 331696642 10364664 2991557..2992276 1 NC_015312.1 KEGG: ami:Amir_5161 hypothetical protein; hypothetical protein 2992276 10364664 Psed_2828 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332881.1 2991557 D 675635 CDS YP_004332882.1 331696643 10364665 2992273..2993226 1 NC_015312.1 KEGG: sen:SACE_0678 integral membrane protein; hypothetical protein 2993226 10364665 Psed_2829 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332882.1 2992273 D 675635 CDS YP_004332883.1 331696644 10364666 2993288..2994469 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: ami:Amir_5160 glycosyl transferase group 1; group 1 glycosyl transferase 2994469 10364666 Psed_2830 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004332883.1 2993288 D 675635 CDS YP_004332884.1 331696645 10364667 2994755..2998312 1 NC_015312.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: ace:Acel_1054 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA polymerase III subunit alpha 2998312 10364667 Psed_2831 Pseudonocardia dioxanivorans CB1190 DNA polymerase III subunit alpha YP_004332884.1 2994755 D 675635 CDS YP_004332885.1 331696646 10364668 complement(2998551..3000038) 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: pfs:PFLU3206 dehydratase; hypothetical protein 3000038 10364668 Psed_2832 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332885.1 2998551 R 675635 CDS YP_004332886.1 331696647 10364669 complement(3000318..3001664) 1 NC_015312.1 PFAM: General substrate transporter; KEGG: bts:Btus_3048 major facilitator superfamily MFS_1; general substrate transporter 3001664 10364669 Psed_2833 Pseudonocardia dioxanivorans CB1190 general substrate transporter YP_004332886.1 3000318 R 675635 CDS YP_004332887.1 331696648 10364670 complement(3001796..3002575) 1 NC_015312.1 PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal; KEGG: cai:Caci_2009 transcriptional regulator, PaaX family; PaaX family transcriptional regulator 3002575 10364670 Psed_2834 Pseudonocardia dioxanivorans CB1190 PaaX family transcriptional regulator YP_004332887.1 3001796 R 675635 CDS YP_004332888.1 331696649 10364671 3002713..3004026 1 NC_015312.1 TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: ami:Amir_5742 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase; PFAM: Aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3004026 10364671 Psed_2835 Pseudonocardia dioxanivorans CB1190 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004332888.1 3002713 D 675635 CDS YP_004332889.1 331696650 10364672 complement(3004132..3004911) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: jan:Jann_3724 methyltransferase type 11; type 11 methyltransferase 3004911 10364672 Psed_2836 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004332889.1 3004132 R 675635 CDS YP_004332890.1 331696651 10364673 3005032..3006171 1 NC_015312.1 KEGG: mjl:Mjls_3094 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; 8-amino-7-oxononanoate synthase 3006171 10364673 Psed_2837 Pseudonocardia dioxanivorans CB1190 8-amino-7-oxononanoate synthase YP_004332890.1 3005032 D 675635 CDS YP_004332891.1 331696652 10364674 3006168..3006866 1 NC_015312.1 KEGG: sen:SACE_0978 dithiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; dethiobiotin synthetase 3006866 10364674 Psed_2838 Pseudonocardia dioxanivorans CB1190 dethiobiotin synthetase YP_004332891.1 3006168 D 675635 CDS YP_004332892.1 331696653 10364675 3006863..3007906 1 NC_015312.1 KEGG: nfa:nfa18320 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; Biotin/thiamin synthesis-associated protein; biotin synthase 3007906 10364675 Psed_2839 Pseudonocardia dioxanivorans CB1190 biotin synthase YP_004332892.1 3006863 D 675635 CDS YP_004332893.1 331696654 10364676 3007903..3008121 1 NC_015312.1 KEGG: cai:Caci_7732 hypothetical protein; hypothetical protein 3008121 10364676 Psed_2840 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332893.1 3007903 D 675635 CDS YP_004332894.1 331696655 10364677 3008129..3008749 1 NC_015312.1 KEGG: req:REQ_29570 hypothetical protein; hypothetical protein 3008749 10364677 Psed_2841 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332894.1 3008129 D 675635 CDS YP_004332895.1 331696656 10364678 3008802..3008969 1 NC_015312.1 hypothetical protein 3008969 10364678 Psed_2842 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332895.1 3008802 D 675635 CDS YP_004332896.1 331696657 10364679 complement(3008966..3009667) 1 NC_015312.1 KEGG: amd:AMED_2221 ATP-dependent protease Lon; PFAM: Peptidase S16, lon N-terminal; SMART: Peptidase S16, lon N-terminal; peptidase S16 lon domain-containing protein 3009667 10364679 Psed_2843 Pseudonocardia dioxanivorans CB1190 peptidase S16 lon domain-containing protein YP_004332896.1 3008966 R 675635 CDS YP_004332897.1 331696658 10364680 complement(3009645..3010355) 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_5731 NUDIX hydrolase; NUDIX hydrolase 3010355 10364680 Psed_2844 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004332897.1 3009645 R 675635 CDS YP_004332898.1 331696659 10364681 3010530..3011525 1 NC_015312.1 PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A, type 2; KEGG: msp:Mspyr1_29620 quinolinate synthetase A; quinolinate synthase A 3011525 10364681 Psed_2845 Pseudonocardia dioxanivorans CB1190 quinolinate synthase A YP_004332898.1 3010530 D 675635 CDS YP_004332899.1 331696660 10364682 3011522..3013225 1 NC_015312.1 TIGRFAM: L-aspartate oxidase; KEGG: ami:Amir_5729 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 3013225 10364682 Psed_2846 Pseudonocardia dioxanivorans CB1190 L-aspartate oxidase YP_004332899.1 3011522 D 675635 CDS YP_004332900.1 331696661 10364683 3013222..3014115 1 NC_015312.1 TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: ami:Amir_5728 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal; nicotinate-nucleotide pyrophosphorylase 3014115 10364683 Psed_2847 Pseudonocardia dioxanivorans CB1190 nicotinate-nucleotide pyrophosphorylase YP_004332900.1 3013222 D 675635 CDS YP_004332901.1 331696662 10364684 3014288..3015613 1 NC_015312.1 PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: amd:AMED_2251 histidinol dehydrogenase; histidinol dehydrogenase 3015613 10364684 Psed_2848 Pseudonocardia dioxanivorans CB1190 histidinol dehydrogenase YP_004332901.1 3014288 D 675635 CDS YP_004332902.1 331696663 10364685 3015610..3016749 1 NC_015312.1 PFAM: Aminotransferase, class I/classII; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: sen:SACE_5777 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 3016749 10364685 Psed_2849 Pseudonocardia dioxanivorans CB1190 histidinol-phosphate aminotransferase YP_004332902.1 3015610 D 675635 CDS YP_004332903.1 331696664 10364686 3016746..3017348 1 NC_015312.1 HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: amd:AMED_2253 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 3017348 10364686 Psed_2850 Pseudonocardia dioxanivorans CB1190 imidazoleglycerol-phosphate dehydratase YP_004332903.1 3016746 D 675635 CDS YP_004332904.1 331696665 10364687 3017708..3018466 1 NC_015312.1 TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: sen:SACE_5761 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit HisH 3018466 10364687 Psed_2851 Pseudonocardia dioxanivorans CB1190 imidazole glycerol phosphate synthase subunit HisH YP_004332904.1 3017708 D 675635 CDS YP_004332905.1 331696666 10364688 3018640..3018831 1 NC_015312.1 hypothetical protein 3018831 10364688 Psed_2852 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332905.1 3018640 D 675635 CDS YP_004332906.1 331696667 10364689 3018850..3019884 1 NC_015312.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: bbt:BBta_2188 methionine synthase (B12-independent); vitamin-B12 independent methionine synthase 3019884 10364689 Psed_2853 Pseudonocardia dioxanivorans CB1190 vitamin-B12 independent methionine synthase YP_004332906.1 3018850 D 675635 CDS YP_004332907.1 331696668 10364690 3019934..3020701 1 NC_015312.1 PFAM: Histidine biosynthesis; TIGRFAM: Bifunctional HisA/TrpF; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: ami:Amir_5712 phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] 3020701 10364690 Psed_2854 Pseudonocardia dioxanivorans CB1190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] YP_004332907.1 3019934 D 675635 CDS YP_004332908.1 331696669 10364691 3020701..3021471 1 NC_015312.1 PFAM: Histidine biosynthesis; TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Histidine biosynthesis, HisF; KEGG: amd:AMED_2282 cyclase HisF; imidazole glycerol phosphate synthase subunit HisF 3021471 10364691 Psed_2855 Pseudonocardia dioxanivorans CB1190 imidazole glycerol phosphate synthase subunit HisF YP_004332908.1 3020701 D 675635 CDS YP_004332909.1 331696670 10364692 3021468..3021821 1 NC_015312.1 HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: nca:Noca_3032 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 3021821 10364692 Psed_2856 Pseudonocardia dioxanivorans CB1190 phosphoribosyl-AMP cyclohydrolase YP_004332909.1 3021468 D 675635 CDS YP_004332910.1 331696671 10364693 complement(3021834..3022712) 1 NC_015312.1 PFAM: Protein of unknown function DUF2236; KEGG: mkm:Mkms_4278 hypothetical protein; hypothetical protein 3022712 10364693 Psed_2857 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332910.1 3021834 R 675635 CDS YP_004332911.1 331696672 10364694 complement(3022822..3023736) 1 NC_015312.1 KEGG: kfl:Kfla_6210 hypothetical protein; hypothetical protein 3023736 10364694 Psed_2858 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332911.1 3022822 R 675635 CDS YP_004332912.1 331696673 10364695 3023844..3025103 1 NC_015312.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: amd:AMED_2841 two-component system histidine kinase; histidine kinase 3025103 10364695 Psed_2859 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004332912.1 3023844 D 675635 CDS YP_004332913.1 331696674 10364696 3025100..3025774 1 NC_015312.1 KEGG: mau:Micau_1043 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 3025774 10364696 Psed_2860 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332913.1 3025100 D 675635 CDS YP_004332914.1 331696675 10364697 complement(3025804..3026469) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_5754 TetR family transcriptional regulator; TetR family transcriptional regulator 3026469 10364697 Psed_2861 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004332914.1 3025804 R 675635 CDS YP_004332915.1 331696676 10364698 3026496..3028088 1 NC_015312.1 TIGRFAM: Anthranilate synthase component I, PabB-like; KEGG: sen:SACE_5753 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I 3028088 10364698 Psed_2862 Pseudonocardia dioxanivorans CB1190 anthranilate synthase component I YP_004332915.1 3026496 D 675635 CDS YP_004332916.1 331696677 10364699 3028085..3028756 1 NC_015312.1 PFAM: Trp biosynthesis associated, transmembrane protein, Oprn/Chp; KEGG: cai:Caci_5713 hypothetical protein; Trp biosynthesis associated, transmembrane protein, Oprn/Chp 3028756 10364699 Psed_2863 Pseudonocardia dioxanivorans CB1190 Trp biosynthesis associated, transmembrane protein, Oprn/Chp YP_004332916.1 3028085 D 675635 CDS YP_004332917.1 331696678 10364700 3028806..3029645 1 NC_015312.1 KEGG: amd:AMED_2293 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 3029645 10364700 Psed_2864 Pseudonocardia dioxanivorans CB1190 indole-3-glycerol phosphate synthase YP_004332917.1 3028806 D 675635 CDS YP_004332918.1 331696679 10364701 3029695..3030993 1 NC_015312.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; KEGG: amd:AMED_2294 tryptophan synthase beta chain; tryptophan synthase subunit beta 3030993 10364701 Psed_2865 Pseudonocardia dioxanivorans CB1190 tryptophan synthase subunit beta YP_004332918.1 3029695 D 675635 CDS YP_004332919.1 331696680 10364702 3030990..3031787 1 NC_015312.1 PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: amd:AMED_2295 tryptophan synthase alpha chain; tryptophan synthase subunit alpha 3031787 10364702 Psed_2866 Pseudonocardia dioxanivorans CB1190 tryptophan synthase subunit alpha YP_004332919.1 3030990 D 675635 CDS YP_004332920.1 331696681 10364703 3032085..3033143 1 NC_015312.1 TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: sen:SACE_5746 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 3033143 10364703 Psed_2867 Pseudonocardia dioxanivorans CB1190 prolipoprotein diacylglyceryl transferase YP_004332920.1 3032085 D 675635 CDS YP_004332921.1 331696682 10364704 3033148..3033786 1 NC_015312.1 KEGG: ami:Amir_5689 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein CHP02453; hypothetical protein 3033786 10364704 Psed_2868 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332921.1 3033148 D 675635 CDS YP_004332922.1 331696683 10364705 3034030..3035448 1 NC_015312.1 TIGRFAM: Pyruvate kinase; KEGG: ami:Amir_5687 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; pyruvate kinase 3035448 10364705 Psed_2869 Pseudonocardia dioxanivorans CB1190 pyruvate kinase YP_004332922.1 3034030 D 675635 CDS YP_004332923.1 331696684 10364706 3035525..3036424 1 NC_015312.1 KEGG: sen:SACE_5719 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase; choloyl-CoA hydrolase 3036424 10364706 Psed_2870 Pseudonocardia dioxanivorans CB1190 choloyl-CoA hydrolase YP_004332923.1 3035525 D 675635 CDS YP_004332924.1 331696685 10364707 3036611..3037174 1 NC_015312.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: rha:RHA1_ro05070 hypothetical protein; OsmC family protein 3037174 10364707 Psed_2871 Pseudonocardia dioxanivorans CB1190 OsmC family protein YP_004332924.1 3036611 D 675635 CDS YP_004332925.1 331696686 10364708 3037219..3038520 1 NC_015312.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: kra:Krad_3362 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-acetylhomoserine/O-acetylserine sulfhydrylase 3038520 10364708 Psed_2872 Pseudonocardia dioxanivorans CB1190 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004332925.1 3037219 D 675635 CDS YP_004332926.1 331696687 10364709 3038520..3039020 1 NC_015312.1 KEGG: bcv:Bcav_3436 CoA-binding domain protein; PFAM: CoA-binding; SMART: CoA-binding; CoA-binding domain-containing protein 3039020 10364709 Psed_2873 Pseudonocardia dioxanivorans CB1190 CoA-binding domain-containing protein YP_004332926.1 3038520 D 675635 CDS YP_004332927.1 331696688 10364710 complement(3039037..3039558) 1 NC_015312.1 hypothetical protein 3039558 10364710 Psed_2874 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332927.1 3039037 R 675635 CDS YP_004332928.1 331696689 10364711 3039687..3040673 1 NC_015312.1 TIGRFAM: Malate dehydrogenase, NAD/NADP; HAMAP: Malate dehydrogenase; KEGG: fri:FraEuI1c_4622 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase, C-terminal; Lactate/malate dehydrogenase, N-terminal; malate dehydrogenase 3040673 10364711 Psed_2875 Pseudonocardia dioxanivorans CB1190 malate dehydrogenase YP_004332928.1 3039687 D 675635 CDS YP_004332929.1 331696690 10364712 3040886..3041485 1 NC_015312.1 PFAM: CAP domain; KEGG: art:Arth_3166 allergen V5/TPX-1 family protein; hypothetical protein 3041485 10364712 Psed_2876 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332929.1 3040886 D 675635 CDS YP_004332930.1 331696691 10364713 3041654..3042214 1 NC_015312.1 PFAM: Domain of unknown function DUF820; KEGG: mil:ML5_3927 hypothetical protein; hypothetical protein 3042214 10364713 Psed_2877 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332930.1 3041654 D 675635 CDS YP_004332931.1 331696692 10364714 complement(3042224..3043960) 1 NC_015312.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: amd:AMED_2594 maltooligosyltrehalose trehalohydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; malto-oligosyltrehalose trehalohydrolase 3043960 10364714 Psed_2878 Pseudonocardia dioxanivorans CB1190 malto-oligosyltrehalose trehalohydrolase YP_004332931.1 3042224 R 675635 CDS YP_004332932.1 331696693 10364715 complement(3044005..3046446) 1 NC_015312.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Malto-oligosyltrehalose synthase; KEGG: amd:AMED_2593 maltooligosyl trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; malto-oligosyltrehalose synthase 3046446 10364715 Psed_2879 Pseudonocardia dioxanivorans CB1190 malto-oligosyltrehalose synthase YP_004332932.1 3044005 R 675635 CDS YP_004332933.1 331696694 10364716 complement(3046443..3048626) 1 NC_015312.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Glycogen debranching enzyme; KEGG: amd:AMED_2592 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; glycogen debranching protein GlgX 3048626 10364716 Psed_2880 Pseudonocardia dioxanivorans CB1190 glycogen debranching protein GlgX YP_004332933.1 3046443 R 675635 CDS YP_004332934.1 331696695 10364717 complement(3048972..3049436) 1 NC_015312.1 KEGG: kfl:Kfla_3151 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 3049436 10364717 Psed_2881 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004332934.1 3048972 R 675635 CDS YP_004332935.1 331696696 10364718 3049496..3049924 1 NC_015312.1 PFAM: Histidine triad (HIT) protein; KEGG: mlu:Mlut_07820 HIT family hydrolase, diadenosine tetraphosphate hydrolase; histidine triad (HIT) protein 3049924 10364718 Psed_2882 Pseudonocardia dioxanivorans CB1190 histidine triad (HIT) protein YP_004332935.1 3049496 D 675635 CDS YP_004332936.1 331696697 10364719 3049926..3050555 1 NC_015312.1 KEGG: req:REQ_41490 phosphoglycerate/bisphosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 3050555 10364719 Psed_2883 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004332936.1 3049926 D 675635 CDS YP_004332937.1 331696698 10364720 3050693..3052000 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_1263 hypothetical protein; major facilitator superfamily protein 3052000 10364720 Psed_2884 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004332937.1 3050693 D 675635 CDS YP_004332938.1 331696699 10364721 complement(3053047..3053907) 1 NC_015312.1 KEGG: stp:Strop_1435 hypothetical protein; hypothetical protein 3053907 10364721 Psed_2885 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332938.1 3053047 R 675635 CDS YP_004332939.1 331696700 10364722 3054069..3055376 1 NC_015312.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: amd:AMED_1262 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 3055376 10364722 Psed_2886 Pseudonocardia dioxanivorans CB1190 diguanylate cyclase YP_004332939.1 3054069 D 675635 CDS YP_004332940.1 331696701 10364723 3055532..3056899 1 NC_015312.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: amd:AMED_1947 GGDEF domain-containing diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 3056899 10364723 Psed_2887 Pseudonocardia dioxanivorans CB1190 diguanylate cyclase YP_004332940.1 3055532 D 675635 CDS YP_004332941.1 331696702 10364724 3056930..3058999 1 NC_015312.1 KEGG: sen:SACE_1815 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; 1-deoxy-D-xylulose-5-phosphate synthase 3058999 10364724 Psed_2888 Pseudonocardia dioxanivorans CB1190 1-deoxy-D-xylulose-5-phosphate synthase YP_004332941.1 3056930 D 675635 CDS YP_004332942.1 331696703 10364725 3058999..3059664 1 NC_015312.1 KEGG: svi:Svir_24140 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 3059664 10364725 Psed_2889 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004332942.1 3058999 D 675635 CDS YP_004332943.1 331696704 10364726 3059676..3060857 1 NC_015312.1 KEGG: sen:SACE_1818 two-component sensor (kinase); PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 3060857 10364726 Psed_2890 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004332943.1 3059676 D 675635 CDS YP_004332944.1 331696705 10364727 complement(3060888..3062072) 1 NC_015312.1 KEGG: ami:Amir_1548 3'-5' exonuclease; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; SMART: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; 3'-5' exonuclease 3062072 10364727 Psed_2891 Pseudonocardia dioxanivorans CB1190 3'-5' exonuclease YP_004332944.1 3060888 R 675635 CDS YP_004332945.1 331696706 10364728 complement(3062150..3062866) 1 NC_015312.1 KEGG: ami:Amir_1549 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 3062866 10364728 Psed_2892 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004332945.1 3062150 R 675635 CDS YP_004332946.1 331696707 10364729 complement(3063120..3063713) 1 NC_015312.1 KEGG: svi:Svir_24100 hypothetical protein; hypothetical protein 3063713 10364729 Psed_2893 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332946.1 3063120 R 675635 CDS YP_004332947.1 331696708 10364730 3063811..3064881 1 NC_015312.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: amd:AMED_2643 uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 3064881 10364730 Psed_2894 Pseudonocardia dioxanivorans CB1190 uroporphyrinogen decarboxylase YP_004332947.1 3063811 D 675635 CDS YP_004332948.1 331696709 10364731 3064881..3066335 1 NC_015312.1 TIGRFAM: Protoporphyrinogen oxidase; KEGG: ami:Amir_1553 protoporphyrinogen oxidase; PFAM: Amine oxidase; protoporphyrinogen oxidase 3066335 10364731 Psed_2895 Pseudonocardia dioxanivorans CB1190 protoporphyrinogen oxidase YP_004332948.1 3064881 D 675635 CDS YP_004332949.1 331696710 10364732 3066413..3067108 1 NC_015312.1 PFAM: Chlorite dismutase; KEGG: svi:Svir_24070 hypothetical protein; chlorite dismutase 3067108 10364732 Psed_2896 Pseudonocardia dioxanivorans CB1190 chlorite dismutase YP_004332949.1 3066413 D 675635 CDS YP_004332950.1 331696711 10364733 complement(3067155..3067862) 1 NC_015312.1 PFAM: LysR, substrate-binding; KEGG: kfl:Kfla_3836 transcriptional regulator, LysR family; LysR family transcriptional regulator 3067862 10364733 Psed_2897 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004332950.1 3067155 R 675635 CDS YP_004332951.1 331696712 10364734 3067906..3068307 1 NC_015312.1 manually curated; KEGG: sen:SACE_4610 hypothetical protein; hypothetical protein 3068307 10364734 Psed_2898 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332951.1 3067906 D 675635 CDS YP_004332952.1 331696713 10364735 complement(3068348..3068806) 1 NC_015312.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: rop:ROP_68470 peptide methionine sulfoxide reductase MsrB; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 3068806 10364735 Psed_2899 Pseudonocardia dioxanivorans CB1190 methionine-R-sulfoxide reductase YP_004332952.1 3068348 R 675635 CDS YP_004332953.1 331696714 10364736 complement(3068846..3069157) 1 NC_015312.1 KEGG: svi:Svir_24050 hypothetical protein; hypothetical protein 3069157 10364736 Psed_2900 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332953.1 3068846 R 675635 CDS YP_004332954.1 331696715 10364737 3069242..3070282 1 NC_015312.1 KEGG: sen:SACE_1849 DNA ligase (ATP); TIGRFAM: DNA polymerase LigD, polymerase domain; PFAM: DNA primase, small subunit; DNA polymerase LigD, polymerase domain-containing protein 3070282 10364737 Psed_2901 Pseudonocardia dioxanivorans CB1190 DNA polymerase LigD, polymerase domain-containing protein YP_004332954.1 3069242 D 675635 CDS YP_004332955.1 331696716 10364738 3070433..3070666 1 NC_015312.1 hypothetical protein 3070666 10364738 Psed_2902 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332955.1 3070433 D 675635 CDS YP_004332956.1 331696717 10364739 complement(3070710..3072329) 1 NC_015312.1 PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; KEGG: sen:SACE_1857 proteinase (secreted protein); TAP domain-containing protein 3072329 10364739 Psed_2903 Pseudonocardia dioxanivorans CB1190 TAP domain-containing protein YP_004332956.1 3070710 R 675635 CDS YP_004332957.1 331696718 10364740 complement(3072412..3073095) 1 NC_015312.1 KEGG: sen:SACE_1862 hypothetical protein; hypothetical protein 3073095 10364740 Psed_2904 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332957.1 3072412 R 675635 CDS YP_004332958.1 331696719 10364741 complement(3073092..3073646) 1 NC_015312.1 KEGG: sen:SACE_1863 hypothetical protein; hypothetical protein 3073646 10364741 Psed_2905 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332958.1 3073092 R 675635 CDS YP_004332959.1 331696720 10364742 complement(3073690..3074091) 1 NC_015312.1 KEGG: sen:SACE_1864 hypothetical protein; hypothetical protein 3074091 10364742 Psed_2906 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332959.1 3073690 R 675635 CDS YP_004332960.1 331696721 10364743 complement(3074097..3074276) 1 NC_015312.1 KEGG: sen:SACE_1865 hypothetical protein; hypothetical protein 3074276 10364743 Psed_2907 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332960.1 3074097 R 675635 CDS YP_004332961.1 331696722 10364744 complement(3074273..3074578) 1 NC_015312.1 KEGG: fal:FRAAL6273 GTP-binding protein; hypothetical protein 3074578 10364744 Psed_2908 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332961.1 3074273 R 675635 CDS YP_004332962.1 331696723 10364745 complement(3074575..3074985) 1 NC_015312.1 KEGG: sen:SACE_1867 hypothetical protein; hypothetical protein 3074985 10364745 Psed_2909 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332962.1 3074575 R 675635 CDS YP_004332963.1 331696724 10364746 complement(3074982..3075497) 1 NC_015312.1 PFAM: Alkaline shock protein Asp23; KEGG: sen:SACE_1868 stress-like protein; hypothetical protein 3075497 10364746 Psed_2910 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332963.1 3074982 R 675635 CDS YP_004332964.1 331696725 10364747 complement(3075679..3076449) 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: ami:Amir_1580 bifunctional deaminase-reductase domain protein; bifunctional deaminase-reductase domain-containing protein 3076449 10364747 Psed_2911 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004332964.1 3075679 R 675635 CDS YP_004332965.1 331696726 10364748 3076660..3077703 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: sro:Sros_7986 ABC transporter, permease, Fe3+-siderophore transport system; ABC transporter permease 3077703 10364748 Psed_2912 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332965.1 3076660 D 675635 CDS YP_004332966.1 331696727 10364749 3077700..3078803 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: sen:SACE_0412 Fe(3+) enterobactin transport system permease; ABC transporter permease 3078803 10364749 Psed_2913 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004332966.1 3077700 D 675635 CDS YP_004332967.1 331696728 10364750 3078800..3079633 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sro:Sros_7988 ABC transporter related protein; SMART: ATPase, AAA+ type, core; iron-chelate-transporting ATPase 3079633 10364750 Psed_2914 Pseudonocardia dioxanivorans CB1190 iron-chelate-transporting ATPase YP_004332967.1 3078800 D 675635 CDS YP_004332968.1 331696729 10364751 3079665..3080519 1 NC_015312.1 KEGG: nml:Namu_3539 hypothetical protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related; polyphosphate:nucleotide phosphotransferase 3080519 10364751 Psed_2915 Pseudonocardia dioxanivorans CB1190 polyphosphate:nucleotide phosphotransferase YP_004332968.1 3079665 D 675635 CDS YP_004332969.1 331696730 10364752 complement(3080548..3081543) 1 NC_015312.1 PFAM: Phosphate transporter; KEGG: sro:Sros_0892 phosphate transporter; phosphate transporter 3081543 10364752 Psed_2916 Pseudonocardia dioxanivorans CB1190 phosphate transporter YP_004332969.1 3080548 R 675635 CDS YP_004332970.1 331696731 10364753 complement(3081545..3082213) 1 NC_015312.1 PFAM: Putitive phosphate transport regulator; KEGG: sgr:SGR_3928 Pit accessory protein; phosphate transport regulator 3082213 10364753 Psed_2917 Pseudonocardia dioxanivorans CB1190 phosphate transport regulator YP_004332970.1 3081545 R 675635 CDS YP_004332971.1 331696732 10364754 3082324..3083712 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; KEGG: sen:SACE_1991 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 3083712 10364754 Psed_2918 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004332971.1 3082324 D 675635 CDS YP_004332972.1 331696733 10364755 3083709..3084950 1 NC_015312.1 PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase; KEGG: sen:SACE_1992 cyclopropane-fatty-acyl-phospholipid synthase; SMART: Polyketide synthase, methyltransferase domain; cyclopropane-fatty-acyl-phospholipid synthase 3084950 10364755 Psed_2919 Pseudonocardia dioxanivorans CB1190 cyclopropane-fatty-acyl-phospholipid synthase YP_004332972.1 3083709 D 675635 CDS YP_004332973.1 331696734 10364756 3084960..3086387 1 NC_015312.1 KEGG: sen:SACE_6439 hypothetical protein; TIGRFAM: Acyltransferase, WS/DGAT/MGAT; PFAM: O-acyltransferase, WSD1, N-terminal; acyltransferase 3086387 10364756 Psed_2920 Pseudonocardia dioxanivorans CB1190 acyltransferase YP_004332973.1 3084960 D 675635 CDS YP_004332974.1 331696735 10364757 complement(3086407..3087750) 1 NC_015312.1 PFAM: Protein of unknown function DUF2252; KEGG: srt:Srot_2797 hypothetical protein; hypothetical protein 3087750 10364757 Psed_2921 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332974.1 3086407 R 675635 CDS YP_004332975.1 331696736 10364758 complement(3087821..3089407) 1 NC_015312.1 KEGG: eli:ELI_02000 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 3089407 10364758 Psed_2922 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004332975.1 3087821 R 675635 CDS YP_004332976.1 331696737 10364759 complement(3089404..3090282) 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: tbi:Tbis_1611 amidohydrolase 2; amidohydrolase 3090282 10364759 Psed_2923 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004332976.1 3089404 R 675635 CDS YP_004332977.1 331696738 10364760 complement(3090279..3091169) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cfl:Cfla_0293 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 3091169 10364760 Psed_2924 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004332977.1 3090279 R 675635 CDS YP_004332978.1 331696739 10364761 complement(3091178..3092350) 1 NC_015312.1 KEGG: ami:Amir_1569 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 3092350 10364761 Psed_2925 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004332978.1 3091178 R 675635 CDS YP_004332979.1 331696740 10364762 complement(3092347..3093186) 1 NC_015312.1 KEGG: mjl:Mjls_1207 dehydratase; PFAM: MaoC-like dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 3093186 10364762 Psed_2926 Pseudonocardia dioxanivorans CB1190 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase YP_004332979.1 3092347 R 675635 CDS YP_004332980.1 331696741 10364763 complement(3093229..3094851) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter substrate-binding protein 3094851 10364763 Psed_2927 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004332980.1 3093229 R 675635 CDS YP_004332981.1 331696742 10364764 complement(3095300..3096151) 1 NC_015312.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: ami:Amir_0874 fructosamine kinase; fructosamine/Ketosamine-3-kinase 3096151 10364764 Psed_2928 Pseudonocardia dioxanivorans CB1190 fructosamine/Ketosamine-3-kinase YP_004332981.1 3095300 R 675635 CDS YP_004332982.1 331696743 10364765 complement(3096148..3096648) 1 NC_015312.1 KEGG: sen:SACE_1579 low molecular weight protein-tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 3096648 10364765 Psed_2929 Pseudonocardia dioxanivorans CB1190 protein tyrosine phosphatase YP_004332982.1 3096148 R 675635 CDS YP_004332983.1 331696744 10364766 3097083..3098180 1 NC_015312.1 PFAM: Aminotransferase, class I/classII; KEGG: sen:SACE_1581 hypothetical protein; class I and II aminotransferase 3098180 10364766 Psed_2930 Pseudonocardia dioxanivorans CB1190 class I and II aminotransferase YP_004332983.1 3097083 D 675635 CDS YP_004332984.1 331696745 10364767 complement(3098192..3099442) 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 3099442 10364767 Psed_2931 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004332984.1 3098192 R 675635 CDS YP_004332985.1 331696746 10364768 3099694..3100845 1 NC_015312.1 KEGG: ami:Amir_0879 protein of unknown function DUF34; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 3100845 10364768 Psed_2932 Pseudonocardia dioxanivorans CB1190 NGG1p interacting factor 3 protein, NIF3 YP_004332985.1 3099694 D 675635 CDS YP_004332986.1 331696747 10364769 3100842..3101582 1 NC_015312.1 PFAM: Protein of unknown function DUF164; KEGG: ami:Amir_0880 protein of unknown function DUF164; hypothetical protein 3101582 10364769 Psed_2933 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332986.1 3100842 D 675635 CDS YP_004332987.1 331696748 10364770 3101579..3102265 1 NC_015312.1 KEGG: req:REQ_28750 RNase H domain phosphoglycerate/bisphosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 3102265 10364770 Psed_2934 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004332987.1 3101579 D 675635 CDS YP_004332988.1 331696749 10364771 complement(3102288..3103697) 1 NC_015312.1 PFAM: Divalent ion symporter; KEGG: mjl:Mjls_5120 arsenical pump membrane protein; citrate transporter 3103697 10364771 Psed_2935 Pseudonocardia dioxanivorans CB1190 citrate transporter YP_004332988.1 3102288 R 675635 CDS YP_004332989.1 331696750 10364772 complement(3103694..3104458) 1 NC_015312.1 PFAM: Protein of unknown function DUF81; KEGG: sen:SACE_1215 hypothetical protein; hypothetical protein 3104458 10364772 Psed_2936 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332989.1 3103694 R 675635 CDS YP_004332990.1 331696751 10364774 3105525..3106853 1 NC_015312.1 KEGG: amd:AMED_5856 predicted HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 3106853 10364774 Psed_2937 Pseudonocardia dioxanivorans CB1190 HNH endonuclease YP_004332990.1 3105525 D 675635 CDS YP_004332991.1 331696752 10364775 3107236..3108474 1 NC_015312.1 KEGG: sen:SACE_5712 retron-type reverse transcriptase; PFAM: Reverse transcriptase; RNA-directed DNA polymerase 3108474 10364775 Psed_2938 Pseudonocardia dioxanivorans CB1190 RNA-directed DNA polymerase YP_004332991.1 3107236 D 675635 CDS YP_004332992.1 331696753 10364776 complement(3108664..3109389) 1 NC_015312.1 KEGG: ske:Sked_13370 acyltransferase; acyltransferase 3109389 10364776 Psed_2939 Pseudonocardia dioxanivorans CB1190 acyltransferase YP_004332992.1 3108664 R 675635 CDS YP_004332993.1 331696754 10364777 complement(3109464..3110114) 1 NC_015312.1 KEGG: cwo:Cwoe_3319 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 3110114 10364777 Psed_2940 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004332993.1 3109464 R 675635 CDS YP_004332994.1 331696755 10364778 3110914..3111513 1 NC_015312.1 KEGG: scb:SCAB_9041 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 3111513 10364778 Psed_2941 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004332994.1 3110914 D 675635 CDS YP_004332995.1 331696756 10364779 complement(3111524..3112498) 1 NC_015312.1 KEGG: sro:Sros_2497 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 3112498 10364779 Psed_2942 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004332995.1 3111524 R 675635 CDS YP_004332996.1 331696757 10364780 3112677..3113894 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: kfl:Kfla_5841 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein 3113894 10364780 Psed_2943 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004332996.1 3112677 D 675635 CDS YP_004332997.1 331696758 10364781 3113958..3116621 1 NC_015312.1 KEGG: ach:Achl_0605 pyruvate phosphate dikinase PEP/pyruvate-binding; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; pyruvate, water dikinase 3116621 10364781 Psed_2944 Pseudonocardia dioxanivorans CB1190 pyruvate, water dikinase YP_004332997.1 3113958 D 675635 CDS YP_004332998.1 331696759 10364782 3116821..3118437 1 NC_015312.1 KEGG: tfu:Tfu_0359 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 3118437 10364782 Psed_2945 Pseudonocardia dioxanivorans CB1190 peptide chain release factor 3 YP_004332998.1 3116821 D 675635 CDS YP_004332999.1 331696760 10364783 complement(3118454..3120001) 1 NC_015312.1 KEGG: cai:Caci_5446 hypothetical protein; hypothetical protein 3120001 10364783 Psed_2946 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004332999.1 3118454 R 675635 CDS YP_004333000.1 331696761 10364784 3120276..3120956 1 NC_015312.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nfa:nfa35310 hypothetical protein; haloacid dehalogenase 3120956 10364784 Psed_2947 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004333000.1 3120276 D 675635 CDS YP_004333001.1 331696762 10364785 complement(3120983..3122218) 1 NC_015312.1 KEGG: bbt:BBta_3103 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 3122218 10364785 Psed_2948 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004333001.1 3120983 R 675635 CDS YP_004333002.1 331696763 10364786 complement(3122438..3123349) 1 NC_015312.1 KEGG: hse:Hsero_0938 AraC family transcription regulator protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 3123349 10364786 Psed_2949 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004333002.1 3122438 R 675635 CDS YP_004333003.1 331696764 10364787 complement(3123482..3124651) 1 NC_015312.1 KEGG: amd:AMED_2797 hypothetical protein; hypothetical protein 3124651 10364787 Psed_2950 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333003.1 3123482 R 675635 CDS YP_004333004.1 331696765 10364788 complement(3124772..3125953) 1 NC_015312.1 KEGG: gob:Gobs_0880 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 3125953 10364788 Psed_2951 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004333004.1 3124772 R 675635 CDS YP_004333005.1 331696766 10364789 complement(3125950..3126633) 1 NC_015312.1 PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: gbr:Gbro_4318 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 3126633 10364789 Psed_2952 Pseudonocardia dioxanivorans CB1190 carbon monoxide dehydrogenase subunit G YP_004333005.1 3125950 R 675635 CDS YP_004333006.1 331696767 10364790 3126814..3128871 1 NC_015312.1 KEGG: sro:Sros_6595 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 3128871 10364790 Psed_2953 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004333006.1 3126814 D 675635 CDS YP_004333007.1 331696768 10364791 3128874..3130766 1 NC_015312.1 KEGG: cai:Caci_1877 hydantoinase B/oxoprolinase; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 3130766 10364791 Psed_2954 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004333007.1 3128874 D 675635 CDS YP_004333008.1 331696769 10364792 3130873..3131727 1 NC_015312.1 KEGG: nca:Noca_0687 regulatory proteins, IclR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 3131727 10364792 Psed_2955 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333008.1 3130873 D 675635 CDS YP_004333009.1 331696770 10364793 3131941..3133413 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: req:REQ_19950 abc transporter atpase suunit; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 3133413 10364793 Psed_2956 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004333009.1 3131941 D 675635 CDS YP_004333010.1 331696771 10364794 3133416..3134438 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: eca:ECA1461 sugar ABC transporter permease; ABC transporter permease 3134438 10364794 Psed_2957 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333010.1 3133416 D 675635 CDS YP_004333011.1 331696772 10364795 3134482..3135504 1 NC_015312.1 KEGG: dap:Dacet_0219 periplasmic binding protein/LacI transcriptional regulator; hypothetical protein 3135504 10364795 Psed_2958 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333011.1 3134482 D 675635 CDS YP_004333012.1 331696773 10364796 3135574..3136446 1 NC_015312.1 KEGG: sti:Sthe_2308 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 3136446 10364796 Psed_2959 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004333012.1 3135574 D 675635 CDS YP_004333013.1 331696774 10364797 3136443..3136997 1 NC_015312.1 KEGG: fri:FraEuI1c_5530 (2Fe-2S)-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 3136997 10364797 Psed_2960 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004333013.1 3136443 D 675635 CDS YP_004333014.1 331696775 10364798 3137001..3139403 1 NC_015312.1 KEGG: tro:trd_0579 oxidoreductase, large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 3139403 10364798 Psed_2961 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004333014.1 3137001 D 675635 CDS YP_004333015.1 331696776 10364799 3139426..3140256 1 NC_015312.1 KEGG: hel:HELO_1462 hypothetical protein; hypothetical protein 3140256 10364799 Psed_2962 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333015.1 3139426 D 675635 CDS YP_004333016.1 331696777 10364800 complement(3140296..3141780) 1 NC_015312.1 KEGG: nda:Ndas_2606 carboxyl transferase; PFAM: Carboxyl transferase; acetyl-CoA carboxylase 3141780 10364800 Psed_2963 Pseudonocardia dioxanivorans CB1190 acetyl-CoA carboxylase YP_004333016.1 3140296 R 675635 CDS YP_004333017.1 331696778 10364801 3142018..3143490 1 NC_015312.1 PFAM: Amidase; KEGG: rxy:Rxyl_0238 amidase; amidase 3143490 10364801 Psed_2964 Pseudonocardia dioxanivorans CB1190 amidase YP_004333017.1 3142018 D 675635 CDS YP_004333018.1 331696779 10364802 3143487..3144278 1 NC_015312.1 PFAM: Creatininase; KEGG: bha:BH0226 creatinine amidohydrolase; creatininase 3144278 10364802 Psed_2965 Pseudonocardia dioxanivorans CB1190 creatininase YP_004333018.1 3143487 D 675635 CDS YP_004333019.1 331696780 10364803 3144517..3145602 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpy:Bphyt_4245 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 3145602 10364803 Psed_2966 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004333019.1 3144517 D 675635 CDS YP_004333020.1 331696781 10364804 3145638..3145853 1 NC_015312.1 hypothetical protein 3145853 10364804 Psed_2967 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333020.1 3145638 D 675635 CDS YP_004333021.1 331696782 10364805 3145865..3147058 1 NC_015312.1 KEGG: bpy:Bphyt_4247 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 3147058 10364805 Psed_2968 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004333021.1 3145865 D 675635 CDS YP_004333022.1 331696783 10364806 complement(3147063..3149741) 1 NC_015312.1 KEGG: cwo:Cwoe_1524 ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Tetratricopeptide repeat; LuxR family transcriptional regulator 3149741 10364806 Psed_2969 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004333022.1 3147063 R 675635 CDS YP_004333023.1 331696784 10364807 complement(3149836..3150795) 1 NC_015312.1 KEGG: cai:Caci_1104 aldo/keto reductase; aldo/keto reductase 3150795 10364807 Psed_2970 Pseudonocardia dioxanivorans CB1190 aldo/keto reductase YP_004333023.1 3149836 R 675635 CDS YP_004333024.1 331696785 10364808 complement(3150792..3151583) 1 NC_015312.1 KEGG: msm:MSMEG_2125 glycerol operon regulatory protein; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 3151583 10364808 Psed_2971 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333024.1 3150792 R 675635 CDS YP_004333025.1 331696786 10364809 3151742..3152743 1 NC_015312.1 TIGRFAM: Dihydroxyacetone kinase DhaK, subunit 1; KEGG: gob:Gobs_2347 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; dihydroxyacetone kinase subunit DhaK 3152743 10364809 Psed_2972 Pseudonocardia dioxanivorans CB1190 dihydroxyacetone kinase subunit DhaK YP_004333025.1 3151742 D 675635 CDS YP_004333026.1 331696787 10364810 3152740..3153369 1 NC_015312.1 KEGG: gob:Gobs_2346 dihydroxyacetone kinase, L subunit; TIGRFAM: Dihydroxyacetone kinase, subunit L; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit DhaL 3153369 10364810 Psed_2973 Pseudonocardia dioxanivorans CB1190 dihydroxyacetone kinase subunit DhaL YP_004333026.1 3152740 D 675635 CDS YP_004333027.1 331696788 10364811 3153366..3155960 1 NC_015312.1 TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; Dihydroxyacetone kinase, subunit phosphotransferase; KEGG: msm:MSMEG_2121 multiphosphoryl transfer protein (MTP); PFAM: PEP-utilising enzyme; Phosphotransferase system, fructose subfamily IIA component; Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; phosphoenolpyruvate-protein phosphotransferase 3155960 10364811 Psed_2974 Pseudonocardia dioxanivorans CB1190 phosphoenolpyruvate-protein phosphotransferase YP_004333027.1 3153366 D 675635 CDS YP_004333028.1 331696789 10364812 complement(3156001..3156546) 1 NC_015312.1 PFAM: NADPH-dependent FMN reductase; KEGG: hla:Hlac_1047 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3156546 10364812 Psed_2975 Pseudonocardia dioxanivorans CB1190 NADPH-dependent FMN reductase YP_004333028.1 3156001 R 675635 CDS YP_004333029.1 331696790 10364813 complement(3156543..3157076) 1 NC_015312.1 manually curated; PFAM: Flavin reductase-like, FMN-binding; KEGG: gob:Gobs_5034 flavin reductase domain-containing protein FMN-binding protein; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 3157076 10364813 Psed_2976 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004333029.1 3156543 R 675635 CDS YP_004333030.1 331696791 10364814 3157257..3158732 1 NC_015312.1 KEGG: mjl:Mjls_4075 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde dehydrogenase domain; betaine-aldehyde dehydrogenase 3158732 10364814 Psed_2977 Pseudonocardia dioxanivorans CB1190 betaine-aldehyde dehydrogenase YP_004333030.1 3157257 D 675635 CDS YP_004333031.1 331696792 10364815 complement(3158922..3159968) 1 NC_015312.1 KEGG: svi:Svir_24480 RNA polymerase sigma factor SigB; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4; RpoD subfamily RNA polymerase sigma-70 subunit 3159968 10364815 Psed_2978 Pseudonocardia dioxanivorans CB1190 RpoD subfamily RNA polymerase sigma-70 subunit YP_004333031.1 3158922 R 675635 CDS YP_004333032.1 331696793 10364816 3160164..3161939 1 NC_015312.1 PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; Alpha/beta hydrolase fold-1; KEGG: nml:Namu_4720 poly-beta-hydroxybutyrate polymerase domain-containing protein; poly-beta-hydroxybutyrate polymerase domain-containing protein 3161939 10364816 Psed_2979 Pseudonocardia dioxanivorans CB1190 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_004333032.1 3160164 D 675635 CDS YP_004333033.1 331696794 10364817 3162000..3162458 1 NC_015312.1 KEGG: nfa:nfa52090 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 3162458 10364817 Psed_2980 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004333033.1 3162000 D 675635 CDS YP_004333034.1 331696795 10364818 complement(3162489..3162911) 1 NC_015312.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: amd:AMED_2569 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 3162911 10364818 Psed_2981 Pseudonocardia dioxanivorans CB1190 D-tyrosyl-tRNA(Tyr) deacylase YP_004333034.1 3162489 R 675635 CDS YP_004333035.1 331696796 10364819 complement(3162908..3164401) 1 NC_015312.1 PFAM: Methyltransferase small; KEGG: sen:SACE_1788 rRNA/tRNA methylase; methyltransferase small 3164401 10364819 Psed_2982 Pseudonocardia dioxanivorans CB1190 methyltransferase small YP_004333035.1 3162908 R 675635 CDS YP_004333036.1 331696797 10364820 3165041..3166627 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter substrate-binding protein 3166627 10364820 Psed_2983 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333036.1 3165041 D 675635 CDS YP_004333037.1 331696798 10364821 3166635..3167267 1 NC_015312.1 KEGG: mau:Micau_1581 HhH-GPD family protein; TIGRFAM: Conserved hypothetical protein CHP03252, HhH-GPD; PFAM: HhH-GPD domain; HhH-GPD family protein 3167267 10364821 Psed_2984 Pseudonocardia dioxanivorans CB1190 HhH-GPD family protein YP_004333037.1 3166635 D 675635 CDS YP_004333038.1 331696799 10364822 3167309..3167764 1 NC_015312.1 KEGG: fre:Franean1_3539 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 3167764 10364822 Psed_2985 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004333038.1 3167309 D 675635 CDS YP_004333039.1 331696800 10364823 3167936..3168256 1 NC_015312.1 KEGG: amd:AMED_2572 hypothetical protein; hypothetical protein 3168256 10364823 Psed_2986 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333039.1 3167936 D 675635 CDS YP_004333040.1 331696801 10364824 complement(3168320..3169249) 1 NC_015312.1 KEGG: ami:Amir_1499 indigoidine synthase A family protein; HAMAP: Pseudouridine-5'-phosphate glycosidase; PFAM: Pseudouridine-5'-phosphate glycosidase; pseudouridine-5'-phosphate glycosidase 3169249 10364824 Psed_2987 Pseudonocardia dioxanivorans CB1190 pseudouridine-5'-phosphate glycosidase YP_004333040.1 3168320 R 675635 CDS YP_004333041.1 331696802 10364825 3169256..3169504 1 NC_015312.1 KEGG: ami:Amir_1500 hypothetical protein; hypothetical protein 3169504 10364825 Psed_2988 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333041.1 3169256 D 675635 CDS YP_004333042.1 331696803 10364826 complement(3169526..3170389) 1 NC_015312.1 KEGG: rha:RHA1_ro03776 poly(3-hydroxyalkanoic acid) depolymerase; TIGRFAM: Poly(3-hydroxyalkanoate) depolymerase; PFAM: Alpha/beta hydrolase fold-1; poly(3-hydroxyalkanoate) depolymerase 3170389 10364826 Psed_2989 Pseudonocardia dioxanivorans CB1190 poly(3-hydroxyalkanoate) depolymerase YP_004333042.1 3169526 R 675635 CDS YP_004333043.1 331696804 10364827 complement(3170386..3171765) 1 NC_015312.1 PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; KEGG: rop:ROP_36330 polyhydroxyalkanoate synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein 3171765 10364827 Psed_2990 Pseudonocardia dioxanivorans CB1190 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_004333043.1 3170386 R 675635 CDS YP_004333044.1 331696805 10364828 3172028..3173758 1 NC_015312.1 KEGG: sen:SACE_1795 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; type III restriction protein res subunit 3173758 10364828 Psed_2991 Pseudonocardia dioxanivorans CB1190 type III restriction protein res subunit YP_004333044.1 3172028 D 675635 CDS YP_004333045.1 331696806 10364829 3173761..3174984 1 NC_015312.1 TIGRFAM: Cysteine desulfurase-related; KEGG: sen:SACE_1797 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase 3174984 10364829 Psed_2992 Pseudonocardia dioxanivorans CB1190 cysteine desulfurase YP_004333045.1 3173761 D 675635 CDS YP_004333046.1 331696807 10364830 complement(3175088..3175273) 1 NC_015312.1 KEGG: sen:SACE_1798 hypothetical protein; hypothetical protein 3175273 10364830 Psed_2993 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333046.1 3175088 R 675635 CDS YP_004333047.1 331696808 10364831 3175491..3176465 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: svi:Svir_24340 predicted permease, DMT superfamily; hypothetical protein 3176465 10364831 Psed_2994 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333047.1 3175491 D 675635 CDS YP_004333048.1 331696809 10364832 3176952..3178082 1 NC_015312.1 KEGG: ami:Amir_1503 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 3178082 10364832 Psed_2995 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004333048.1 3176952 D 675635 CDS YP_004333049.1 331696810 10364833 3178167..3178946 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: ami:Amir_1504 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 3178946 10364833 Psed_2996 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004333049.1 3178167 D 675635 CDS YP_004333050.1 331696811 10364834 3178943..3180460 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: ami:Amir_1505 inner-membrane translocator; ABC transporter permease 3180460 10364834 Psed_2997 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333050.1 3178943 D 675635 CDS YP_004333051.1 331696812 10364835 3180457..3181629 1 NC_015312.1 KEGG: ami:Amir_1506 ROK family protein; PFAM: ROK; glucokinase 3181629 10364835 Psed_2998 Pseudonocardia dioxanivorans CB1190 glucokinase YP_004333051.1 3180457 D 675635 CDS YP_004333052.1 331696813 10364836 3181765..3181911 1 NC_015312.1 hypothetical protein 3181911 10364836 Psed_2999 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333052.1 3181765 D 675635 CDS YP_004333053.1 331696814 10364837 3182178..3183428 1 NC_015312.1 KEGG: kra:Krad_0463 aspartate kinase; TIGRFAM: Aspartate kinase domain; PFAM: Aspartate/glutamate/uridylate kinase; aspartate kinase 3183428 10364837 Psed_3000 Pseudonocardia dioxanivorans CB1190 aspartate kinase YP_004333053.1 3182178 D 675635 CDS YP_004333054.1 331696815 10364838 3183638..3189808 1 NC_015312.1 SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Non-ribosomal peptide synthetase C-terminal; Amino acid adenylation; Diaminobutyrate-2-oxoglutarate transaminase; KEGG: aau:AAur_pTC10155 non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Bacterial transferase hexapeptide repeat; Aminotransferase class-III; non-ribosomal peptide synthetase domain-containing protein 3189808 10364838 Psed_3001 Pseudonocardia dioxanivorans CB1190 non-ribosomal peptide synthetase domain-containing protein YP_004333054.1 3183638 D 675635 CDS YP_004333055.1 331696816 10364839 complement(3189885..3190310) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sna:Snas_0252 transcriptional regulator, TetR family; TetR family transcriptional regulator 3190310 10364839 Psed_3002 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333055.1 3189885 R 675635 CDS YP_004333056.1 331696817 10364840 complement(3190555..3190773) 1 NC_015312.1 KEGG: rop:ROP_68040 hypothetical protein; hypothetical protein 3190773 10364840 Psed_3003 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333056.1 3190555 R 675635 CDS YP_004333057.1 331696818 10364841 complement(3190779..3191006) 1 NC_015312.1 KEGG: ami:Amir_1687 hypothetical protein; hypothetical protein 3191006 10364841 Psed_3004 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333057.1 3190779 R 675635 CDS YP_004333058.1 331696819 10364842 complement(3191162..3193780) 1 NC_015312.1 KEGG: sen:SACE_3314 surface layer protein; TIGRFAM: YVTN beta-propeller repeat; PFAM: Heat shock protein 70; hypothetical protein 3193780 10364842 Psed_3005 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333058.1 3191162 R 675635 CDS YP_004333059.1 331696820 10364844 3194682..3195347 1 NC_015312.1 KEGG: fal:FRAAL3267 transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 3195347 10364844 Psed_3007 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004333059.1 3194682 D 675635 CDS YP_004333060.1 331696821 10364845 3195458..3196840 1 NC_015312.1 KEGG: sen:SACE_3311 hypothetical protein; hypothetical protein 3196840 10364845 Psed_3008 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333060.1 3195458 D 675635 CDS YP_004333061.1 331696822 10364846 3196845..3202397 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; KEGG: sen:SACE_3310 signal transduction histidine kinase; histidine kinase 3202397 10364846 Psed_3009 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004333061.1 3196845 D 675635 CDS YP_004333062.1 331696823 10364847 complement(3202428..3203642) 1 NC_015312.1 PFAM: Acyltransferase 3; KEGG: amd:AMED_6015 acyltransferase; acyltransferase 3203642 10364847 Psed_3010 Pseudonocardia dioxanivorans CB1190 acyltransferase YP_004333062.1 3202428 R 675635 CDS YP_004333063.1 331696824 10364848 3203920..3204930 1 NC_015312.1 KEGG: gob:Gobs_3633 ANTAR domain-containing protein; hypothetical protein 3204930 10364848 Psed_3011 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333063.1 3203920 D 675635 CDS YP_004333064.1 331696825 10364849 3205116..3206147 1 NC_015312.1 manually curated; KEGG: rop:ROP_13020 hypothetical protein; hypothetical protein 3206147 10364849 Psed_3012 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333064.1 3205116 D 675635 CDS YP_004333065.1 331696826 10364850 3206144..3206986 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_13030 ABC transporter permease; ABC transporter permease 3206986 10364850 Psed_3013 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333065.1 3206144 D 675635 CDS YP_004333066.1 331696827 10364851 3206979..3207749 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: rer:RER_40110 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 3207749 10364851 Psed_3014 Pseudonocardia dioxanivorans CB1190 taurine-transporting AtPase YP_004333066.1 3206979 D 675635 CDS YP_004333067.1 331696828 10364852 3207754..3207975 1 NC_015312.1 hypothetical protein 3207975 10364852 Psed_3015 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333067.1 3207754 D 675635 CDS YP_004333068.1 331696829 10364853 complement(3208100..3209002) 1 NC_015312.1 KEGG: ach:Achl_3085 hypothetical protein; hypothetical protein 3209002 10364853 Psed_3016 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333068.1 3208100 R 675635 CDS YP_004333069.1 331696830 10364854 3209672..3210889 1 NC_015312.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; KEGG: sgr:SGR_3528 methyltransferase; PFAM: Tetrapyrrole methylase; precorrin-6y C5,15-methyltransferase subunit CbiE 3210889 10364854 Psed_3017 Pseudonocardia dioxanivorans CB1190 precorrin-6y C5,15-methyltransferase subunit CbiE YP_004333069.1 3209672 D 675635 CDS YP_004333070.1 331696831 10364855 3210886..3211629 1 NC_015312.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; KEGG: sen:SACE_5945 precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole methylase; precorrin-4 C11-methyltransferase 3211629 10364855 Psed_3018 Pseudonocardia dioxanivorans CB1190 precorrin-4 C11-methyltransferase YP_004333070.1 3210886 D 675635 CDS YP_004333071.1 331696832 10364856 3211617..3212387 1 NC_015312.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; KEGG: sro:Sros_5596 precorrin-6A reductase; PFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; precorrin-6x reductase 3212387 10364856 Psed_3019 Pseudonocardia dioxanivorans CB1190 precorrin-6x reductase YP_004333071.1 3211617 D 675635 CDS YP_004333072.1 331696833 10364857 complement(3212578..3214131) 1 NC_015312.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; KEGG: sro:Sros_5595 precorrin-3B methylase-like protein; PFAM: Tetrapyrrole methylase; precorrin-3B C17-methyltransferase 3214131 10364857 Psed_3020 Pseudonocardia dioxanivorans CB1190 precorrin-3B C17-methyltransferase YP_004333072.1 3212578 R 675635 CDS YP_004333073.1 331696834 10364858 complement(3214134..3214760) 1 NC_015312.1 KEGG: nfa:nfa31510 precorrin-8X methylmutase; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core; precorrin-8X methylmutase 3214760 10364858 Psed_3021 Pseudonocardia dioxanivorans CB1190 precorrin-8X methylmutase YP_004333073.1 3214134 R 675635 CDS YP_004333074.1 331696835 10364859 complement(3214757..3216082) 1 NC_015312.1 PFAM: Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: amd:AMED_7063 precorrin-3B synthase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain-containing protein 3216082 10364859 Psed_3022 Pseudonocardia dioxanivorans CB1190 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain-containing protein YP_004333074.1 3214757 R 675635 CDS YP_004333075.1 331696836 10364860 3216275..3219880 1 NC_015312.1 TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: req:REQ_23600 cobaltochelatase CobN; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 3219880 10364860 Psed_3023 Pseudonocardia dioxanivorans CB1190 cobaltochelatase subunit CobN YP_004333075.1 3216275 D 675635 CDS YP_004333076.1 331696837 10364861 complement(3219912..3220970) 1 NC_015312.1 KEGG: vei:Veis_4611 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase 3220970 10364861 Psed_3024 Pseudonocardia dioxanivorans CB1190 maleylacetate reductase YP_004333076.1 3219912 R 675635 CDS YP_004333077.1 331696838 10364862 complement(3221080..3222540) 1 NC_015312.1 TIGRFAM: D-hydantoinase; KEGG: cti:RALTA_A2550 dihydropyrimidinase; PFAM: Amidohydrolase 1; dihydropyrimidinase 3222540 10364862 Psed_3025 Pseudonocardia dioxanivorans CB1190 dihydropyrimidinase YP_004333077.1 3221080 R 675635 CDS YP_004333078.1 331696839 10364863 complement(3222540..3223574) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease 3223574 10364863 Psed_3026 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333078.1 3222540 R 675635 CDS YP_004333079.1 331696840 10364864 complement(3223571..3225145) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: nca:Noca_0100 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 3225145 10364864 Psed_3027 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004333079.1 3223571 R 675635 CDS YP_004333080.1 331696841 10364865 complement(3225170..3226351) 1 NC_015312.1 KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein 3226351 10364865 Psed_3028 Pseudonocardia dioxanivorans CB1190 sugar ABC transporter substrate-binding protein YP_004333080.1 3225170 R 675635 CDS YP_004333081.1 331696842 10364866 complement(3226421..3227170) 1 NC_015312.1 KEGG: dsh:Dshi_3048 GntR-family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 3227170 10364866 Psed_3029 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333081.1 3226421 R 675635 CDS YP_004333082.1 331696843 10364867 3227308..3228744 1 NC_015312.1 KEGG: bja:blr3295 phenylhydantoinase; PFAM: Amidohydrolase 1; allantoinase 3228744 10364867 Psed_3030 Pseudonocardia dioxanivorans CB1190 allantoinase YP_004333082.1 3227308 D 675635 CDS YP_004333083.1 331696844 10364868 complement(3228775..3230241) 1 NC_015312.1 PFAM: Amidase; KEGG: syg:sync_2679 enantiomer-selective amidase; amidase 3230241 10364868 Psed_3031 Pseudonocardia dioxanivorans CB1190 amidase YP_004333083.1 3228775 R 675635 CDS YP_004333084.1 331696845 10364869 complement(3230238..3231611) 1 NC_015312.1 PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; KEGG: rop:ROP_29700 acetyl-CoA carboxylase biotin carboxylase subunit; SMART: Biotin carboxylase, C-terminal; pyruvate carboxylase 3231611 10364869 Psed_3032 Pseudonocardia dioxanivorans CB1190 pyruvate carboxylase YP_004333084.1 3230238 R 675635 CDS YP_004333085.1 331696846 10364870 complement(3231608..3232207) 1 NC_015312.1 PFAM: Biotin/lipoyl attachment; KEGG: rop:ROP_29710 acetyl-CoA carboxylase biotin carboxyl carrier protein; biotin/lipoyl attachment domain-containing protein 3232207 10364870 Psed_3033 Pseudonocardia dioxanivorans CB1190 biotin/lipoyl attachment domain-containing protein YP_004333085.1 3231608 R 675635 CDS YP_004333086.1 331696847 10364871 complement(3232204..3233712) 1 NC_015312.1 KEGG: sti:Sthe_2821 pyruvate carboxylase; PFAM: Carboxylase, conserved domain; Pyruvate carboxyltransferase; pyruvate carboxylase 3233712 10364871 Psed_3034 Pseudonocardia dioxanivorans CB1190 pyruvate carboxylase YP_004333086.1 3232204 R 675635 CDS YP_004333087.1 331696848 10364872 complement(3233709..3235157) 1 NC_015312.1 SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: avi:Avi_7413 ScoB; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3235157 10364872 Psed_3035 Pseudonocardia dioxanivorans CB1190 3-oxoacid CoA-transferase subunit A YP_004333087.1 3233709 R 675635 CDS YP_004333088.1 331696849 10364873 complement(3235663..3237108) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_6047 major facilitator superfamily MFS_1; major facilitator superfamily protein 3237108 10364873 Psed_3036 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333088.1 3235663 R 675635 CDS YP_004333089.1 331696850 10364874 3237377..3238270 1 NC_015312.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: nfa:nfa24340 ABC transporter substrate-binding protein; metal ion ABC transporter periplasmic subunit 3238270 10364874 Psed_3037 Pseudonocardia dioxanivorans CB1190 metal ion ABC transporter periplasmic subunit YP_004333089.1 3237377 D 675635 CDS YP_004333090.1 331696851 10364875 3238267..3239025 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: bfa:Bfae_31320 ATPase component of Mn/Zn ABC-type transporter; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 3239025 10364875 Psed_3038 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004333090.1 3238267 D 675635 CDS YP_004333091.1 331696852 10364876 3239022..3239906 1 NC_015312.1 PFAM: ABC-3; KEGG: rha:RHA1_ro07269 zinc ABC transporter permease; ABC transporter permease 3239906 10364876 Psed_3039 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333091.1 3239022 D 675635 CDS YP_004333092.1 331696853 10364877 3239989..3240651 1 NC_015312.1 KEGG: srt:Srot_1549 DtxR family iron (metal) dependent repressor; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor, diptheria toxin type; HTH transcriptional regulator, Crp; Ferrous iron transporter, FeoA subunit; DtxR family iron (metal) dependent repressor 3240651 10364877 Psed_3040 Pseudonocardia dioxanivorans CB1190 DtxR family iron (metal) dependent repressor YP_004333092.1 3239989 D 675635 CDS YP_004333093.1 331696854 10364878 3240800..3241276 1 NC_015312.1 PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: msm:MSMEG_0159 formate dehydrogenase, gamma subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 3241276 10364878 Psed_3041 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004333093.1 3240800 D 675635 CDS YP_004333094.1 331696855 10364879 3241273..3242772 1 NC_015312.1 PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: msm:MSMEG_0160 formate dehydrogenase, beta subunit; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 3242772 10364879 Psed_3042 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004333094.1 3241273 D 675635 CDS YP_004333095.1 331696856 10364880 3242769..3245597 1 NC_015312.1 TIGRFAM: Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S binding domain; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; KEGG: msm:MSMEG_0161 formate dehydrogenase, alpha subunit; SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Molybdopterin oxidoreductase, Fe4S4 domain; formate dehydrogenase subunit alpha 3245597 10364880 Psed_3043 Pseudonocardia dioxanivorans CB1190 formate dehydrogenase subunit alpha YP_004333095.1 3242769 D 675635 CDS YP_004333096.1 331696857 10364881 3245590..3245844 1 NC_015312.1 KEGG: msm:MSMEG_0162 NAD-dependent formate dehydrogenase delta subunit; hypothetical protein 3245844 10364881 Psed_3044 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333096.1 3245590 D 675635 CDS YP_004333097.1 331696858 10364882 complement(3245874..3246359) 1 NC_015312.1 KEGG: scb:SCAB_84441 MarR family regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3246359 10364882 Psed_3045 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004333097.1 3245874 R 675635 CDS YP_004333098.1 331696859 10364883 3246423..3247520 1 NC_015312.1 KEGG: sma:SAV_1189 regulatory protein; regulatory protein 3247520 10364883 Psed_3046 Pseudonocardia dioxanivorans CB1190 regulatory protein YP_004333098.1 3246423 D 675635 CDS YP_004333099.1 331696860 10364884 3247683..3247973 1 NC_015312.1 KEGG: gob:Gobs_2160 hypothetical protein; hypothetical protein 3247973 10364884 Psed_3047 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333099.1 3247683 D 675635 CDS YP_004333100.1 331696861 10364885 3247975..3248613 1 NC_015312.1 PFAM: AmiS/UreI transporter; KEGG: gob:Gobs_2159 AmiS/UreI transporter; AmiS/UreI transporter 3248613 10364885 Psed_3048 Pseudonocardia dioxanivorans CB1190 AmiS/UreI transporter YP_004333100.1 3247975 D 675635 CDS YP_004333101.1 331696862 10364886 3248730..3249983 1 NC_015312.1 KEGG: rha:RHA1_ro02124 formamidase; PFAM: Acetamidase/Formamidase; formamidase 3249983 10364886 Psed_3049 Pseudonocardia dioxanivorans CB1190 formamidase YP_004333101.1 3248730 D 675635 CDS YP_004333102.1 331696863 10364887 complement(3250051..3250356) 1 NC_015312.1 hypothetical protein 3250356 10364887 Psed_3050 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333102.1 3250051 R 675635 CDS YP_004333103.1 331696864 10364888 complement(3250536..3251921) 1 NC_015312.1 KEGG: amd:AMED_2601 RNA polymerase primary sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4; RpoD subfamily RNA polymerase sigma-70 subunit 3251921 10364888 Psed_3051 Pseudonocardia dioxanivorans CB1190 RpoD subfamily RNA polymerase sigma-70 subunit YP_004333103.1 3250536 R 675635 CDS YP_004333104.1 331696865 10364889 3252670..3253560 1 NC_015312.1 KEGG: amd:AMED_2603 myo-inositol-1(or 4)-monophosphatase; PFAM: Inositol monophosphatase; inositol-phosphate phosphatase 3253560 10364889 Psed_3052 Pseudonocardia dioxanivorans CB1190 inositol-phosphate phosphatase YP_004333104.1 3252670 D 675635 CDS YP_004333105.1 331696866 10364890 complement(3253615..3254274) 1 NC_015312.1 KEGG: nfa:nfa37560 hypothetical protein; hypothetical protein 3254274 10364890 Psed_3053 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333105.1 3253615 R 675635 CDS YP_004333106.1 331696867 10364891 complement(3254271..3255362) 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: gob:Gobs_1868 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3255362 10364891 Psed_3054 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004333106.1 3254271 R 675635 CDS YP_004333107.1 331696868 10364892 3255705..3256007 1 NC_015312.1 KEGG: rop:ROP_68120 hypothetical protein; hypothetical protein 3256007 10364892 Psed_3055 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333107.1 3255705 D 675635 CDS YP_004333108.1 331696869 10364893 complement(3256098..3256589) 1 NC_015312.1 KEGG: sen:SACE_1806 hypothetical protein; hypothetical protein 3256589 10364893 Psed_3056 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333108.1 3256098 R 675635 CDS YP_004333109.1 331696870 10364894 3256616..3257173 1 NC_015312.1 PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase; HAMAP: DeoxyUTP pyrophosphatase; KEGG: ami:Amir_1515 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; deoxyuridine 5'-triphosphate nucleotidohydrolase 3257173 10364894 Psed_3057 Pseudonocardia dioxanivorans CB1190 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004333109.1 3256616 D 675635 CDS YP_004333110.1 331696871 10364895 3257173..3260358 1 NC_015312.1 KEGG: mmu:12842 collagen, type I, alpha 1; hypothetical protein 3260358 10364895 Psed_3058 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333110.1 3257173 D 675635 CDS YP_004333111.1 331696872 10364896 complement(3261046..3261798) 1 NC_015312.1 KEGG: svi:Svir_24240 hypothetical protein; hypothetical protein 3261798 10364896 Psed_3059 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333111.1 3261046 R 675635 CDS YP_004333112.1 331696873 10364897 3261957..3262334 1 NC_015312.1 PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: amd:AMED_2610 hypothetical protein; OB-fold tRNA/helicase-type nucleic acid binding-protein 3262334 10364897 Psed_3060 Pseudonocardia dioxanivorans CB1190 OB-fold tRNA/helicase-type nucleic acid binding-protein YP_004333112.1 3261957 D 675635 CDS YP_004333113.1 331696874 10364898 3262331..3263287 1 NC_015312.1 KEGG: sen:SACE_1810 integral membrane alanine and leucine rich protein; hypothetical protein 3263287 10364898 Psed_3061 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333113.1 3262331 D 675635 CDS YP_004333114.1 331696875 10364899 complement(3263318..3263974) 1 NC_015312.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: sen:SACE_1811 trk system potassium uptake protein; TrkA-N domain-containing protein 3263974 10364899 Psed_3062 Pseudonocardia dioxanivorans CB1190 TrkA-N domain-containing protein YP_004333114.1 3263318 R 675635 CDS YP_004333115.1 331696876 10364900 complement(3263980..3264642) 1 NC_015312.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: ami:Amir_1521 TrkA-N domain protein; TrkA-N domain-containing protein 3264642 10364900 Psed_3063 Pseudonocardia dioxanivorans CB1190 TrkA-N domain-containing protein YP_004333115.1 3263980 R 675635 CDS YP_004333116.1 331696877 10364901 3264742..3266802 1 NC_015312.1 KEGG: ami:Amir_1522 hypothetical protein; hypothetical protein 3266802 10364901 Psed_3064 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333116.1 3264742 D 675635 CDS YP_004333117.1 331696878 10364902 3266799..3267995 1 NC_015312.1 PFAM: Deoxyribonuclease/rho motif-related TRAM; KEGG: amd:AMED_2615 23S rRNA methyltransferase; deoxyribonuclease/rho motif-related TRAM 3267995 10364902 Psed_3065 Pseudonocardia dioxanivorans CB1190 deoxyribonuclease/rho motif-related TRAM YP_004333117.1 3266799 D 675635 CDS YP_004333118.1 331696879 10364903 3268021..3268929 1 NC_015312.1 KEGG: tcu:Tcur_4636 hypothetical protein; hypothetical protein 3268929 10364903 Psed_3066 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333118.1 3268021 D 675635 CDS YP_004333119.1 331696880 10364904 3269021..3271516 1 NC_015312.1 KEGG: fra:Francci3_0217 RNA binding S1; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; Tex-like protein 3271516 10364904 Psed_3067 Pseudonocardia dioxanivorans CB1190 Tex-like protein YP_004333119.1 3269021 D 675635 CDS YP_004333120.1 331696881 10364905 3271811..3273790 1 NC_015312.1 KEGG: ami:Amir_2267 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 3273790 10364905 Psed_3068 Pseudonocardia dioxanivorans CB1190 DEAD/DEAH box helicase domain-containing protein YP_004333120.1 3271811 D 675635 CDS YP_004333121.1 331696882 10364906 complement(3273868..3274374) 1 NC_015312.1 PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 3274374 10364906 Psed_3069 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004333121.1 3273868 R 675635 CDS YP_004333122.1 331696883 10364907 3274583..3276004 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro03382 MFS superfamily tartrate symporter; major facilitator superfamily protein 3276004 10364907 Psed_3070 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333122.1 3274583 D 675635 CDS YP_004333123.1 331696884 10364908 3276001..3277707 1 NC_015312.1 PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: sen:SACE_1280 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 3277707 10364908 Psed_3071 Pseudonocardia dioxanivorans CB1190 dihydroxy-acid dehydratase YP_004333123.1 3276001 D 675635 CDS YP_004333124.1 331696885 10364909 3277784..3278404 1 NC_015312.1 hypothetical protein 3278404 10364909 Psed_3072 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333124.1 3277784 D 675635 CDS YP_004333125.1 331696886 10364910 complement(3278470..3280839) 1 NC_015312.1 KEGG: rer:RER_32310 hypothetical protein; hypothetical protein 3280839 10364910 Psed_3073 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333125.1 3278470 R 675635 CDS YP_004333126.1 331696887 10364911 complement(3281212..3281670) 1 NC_015312.1 KEGG: kfl:Kfla_6569 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 3281670 10364911 Psed_3074 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004333126.1 3281212 R 675635 CDS YP_004333127.1 331696888 10364912 3281829..3282905 1 NC_015312.1 KEGG: kfl:Kfla_6568 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 3282905 10364912 Psed_3075 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333127.1 3281829 D 675635 CDS YP_004333128.1 331696889 10364913 3282911..3283906 1 NC_015312.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: kfl:Kfla_6567 transketolase central region; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 3283906 10364913 Psed_3076 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333128.1 3282911 D 675635 CDS YP_004333129.1 331696890 10364914 3283903..3285249 1 NC_015312.1 KEGG: kfl:Kfla_6566 catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase 3285249 10364914 Psed_3077 Pseudonocardia dioxanivorans CB1190 dihydrolipoyllysine-residue acetyltransferase YP_004333129.1 3283903 D 675635 CDS YP_004333130.1 331696891 10364917 3286579..3287472 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 3287472 10364917 Psed_3080 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004333130.1 3286579 D 675635 CDS YP_004333131.1 331696892 10364918 complement(3287493..3287951) 1 NC_015312.1 hypothetical protein 3287951 10364918 Psed_3081 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333131.1 3287493 R 675635 CDS YP_004333132.1 331696893 10364919 3288010..3289353 1 NC_015312.1 PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: sen:SACE_4525 cytosine/purines/uracil/thiamine/allantoin family permease; cytosine/purines uracil thiamine allantoin permease 3289353 10364919 Psed_3082 Pseudonocardia dioxanivorans CB1190 cytosine/purines uracil thiamine allantoin permease YP_004333132.1 3288010 D 675635 CDS YP_004333133.1 331696894 10364920 3289346..3290947 1 NC_015312.1 KEGG: sro:Sros_5269 N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 1; N-acyl-D-amino-acid deacylase 3290947 10364920 Psed_3083 Pseudonocardia dioxanivorans CB1190 N-acyl-D-amino-acid deacylase YP_004333133.1 3289346 D 675635 CDS YP_004333134.1 331696895 10364921 complement(3290887..3292596) 1 NC_015312.1 KEGG: sen:SACE_4530 hypothetical protein; transcriptional regulator CdaR 3292596 10364921 Psed_3084 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004333134.1 3290887 R 675635 CDS YP_004333135.1 331696896 10364922 complement(3292655..3294211) 1 NC_015312.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: gmc:GY4MC1_3873 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 3294211 10364922 Psed_3085 Pseudonocardia dioxanivorans CB1190 hydantoinase/oxoprolinase YP_004333135.1 3292655 R 675635 CDS YP_004333136.1 331696897 10364923 complement(3294204..3295280) 1 NC_015312.1 PFAM: Protein of unknown function DUF917; KEGG: drm:Dred_1546 hypothetical protein; hypothetical protein 3295280 10364923 Psed_3086 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333136.1 3294204 R 675635 CDS YP_004333137.1 331696898 10364924 3295751..3297334 1 NC_015312.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: gmc:GY4MC1_1588 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 3297334 10364924 Psed_3087 Pseudonocardia dioxanivorans CB1190 4-hydroxyphenylacetate 3-hydroxylase YP_004333137.1 3295751 D 675635 CDS YP_004333138.1 331696899 10364925 3297411..3298091 1 NC_015312.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: art:Arth_3928 reduced coenzyme F420:NADP oxidoreductase; coenzyme F420-dependent NADP oxidoreductase 3298091 10364925 Psed_3088 Pseudonocardia dioxanivorans CB1190 coenzyme F420-dependent NADP oxidoreductase YP_004333138.1 3297411 D 675635 CDS YP_004333139.1 331696900 10364926 3298204..3298728 1 NC_015312.1 KEGG: cwo:Cwoe_3996 transcriptional activator domain protein; transcriptional activator domain-containing protein 3298728 10364926 Psed_3089 Pseudonocardia dioxanivorans CB1190 transcriptional activator domain-containing protein YP_004333139.1 3298204 D 675635 CDS YP_004333140.1 331696901 10364927 complement(3298741..3299634) 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 3299634 10364927 Psed_3090 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004333140.1 3298741 R 675635 CDS YP_004333141.1 331696902 10364928 3299721..3302273 1 NC_015312.1 PFAM: Bacterial transcriptional activator domain; KEGG: ach:Achl_4571 transcriptional activator domain protein; transcriptional activator domain-containing protein 3302273 10364928 Psed_3091 Pseudonocardia dioxanivorans CB1190 transcriptional activator domain-containing protein YP_004333141.1 3299721 D 675635 CDS YP_004333142.1 331696903 10364929 3302349..3302888 1 NC_015312.1 KEGG: rxy:Rxyl_1858 GntR family transcriptional regulator; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 3302888 10364929 Psed_3092 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004333142.1 3302349 D 675635 CDS YP_004333143.1 331696904 10364930 3303000..3303854 1 NC_015312.1 KEGG: rer:RER_54230 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; Catechol 1,2-dioxygenase 3303854 10364930 Psed_3093 Pseudonocardia dioxanivorans CB1190 Catechol 1,2-dioxygenase YP_004333143.1 3303000 D 675635 CDS YP_004333144.1 331696905 10364931 3303947..3305068 1 NC_015312.1 SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: rop:ROP_20860 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; muconate and chloromuconate cycloisomerase 3305068 10364931 Psed_3094 Pseudonocardia dioxanivorans CB1190 muconate and chloromuconate cycloisomerase YP_004333144.1 3303947 D 675635 CDS YP_004333145.1 331696906 10364932 3305071..3305355 1 NC_015312.1 KEGG: rer:RER_54210 muconolactone isomerase; PFAM: Muconolactone delta-isomerase; Muconolactone Delta-isomerase 3305355 10364932 Psed_3095 Pseudonocardia dioxanivorans CB1190 Muconolactone Delta-isomerase YP_004333145.1 3305071 D 675635 CDS YP_004333146.1 331696907 10364933 3305436..3305960 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nca:Noca_2053 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3305960 10364933 Psed_3096 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333146.1 3305436 D 675635 CDS YP_004333147.1 331696908 10364934 3305957..3307120 1 NC_015312.1 PFAM: Phospholipase/carboxylesterase; KEGG: nca:Noca_2054 phospholipase/carboxylesterase; phospholipase/carboxylesterase 3307120 10364934 Psed_3097 Pseudonocardia dioxanivorans CB1190 phospholipase/carboxylesterase YP_004333147.1 3305957 D 675635 CDS YP_004333148.1 331696909 10364935 3307234..3308028 1 NC_015312.1 TIGRFAM: Cytidyltransferase-related; KEGG: sgr:SGR_1806 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; cytidyltransferase-related domain-containing protein 3308028 10364935 Psed_3098 Pseudonocardia dioxanivorans CB1190 cytidyltransferase-related domain-containing protein YP_004333148.1 3307234 D 675635 CDS YP_004333149.1 331696910 10364936 complement(3308199..3309590) 1 NC_015312.1 KEGG: rha:RHA1_ro00594 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cysteine synthase 3309590 10364936 Psed_3099 Pseudonocardia dioxanivorans CB1190 Cysteine synthase YP_004333149.1 3308199 R 675635 CDS YP_004333150.1 331696911 10364937 3309626..3310222 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: mgi:Mflv_3090 methyltransferase type 11; type 11 methyltransferase 3310222 10364937 Psed_3100 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004333150.1 3309626 D 675635 CDS YP_004333151.1 331696912 10364938 3310305..3311306 1 NC_015312.1 PFAM: Acetamidase/Formamidase; KEGG: fri:FraEuI1c_0390 acetamidase/formamidase; acetamidase/formamidase 3311306 10364938 Psed_3101 Pseudonocardia dioxanivorans CB1190 acetamidase/formamidase YP_004333151.1 3310305 D 675635 CDS YP_004333152.1 331696913 10364939 3311342..3312103 1 NC_015312.1 KEGG: msm:MSMEG_4382 dehydrogenase/reductase SDR family protein member 10; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3312103 10364939 Psed_3102 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333152.1 3311342 D 675635 CDS YP_004333153.1 331696914 10364940 3312108..3313241 1 NC_015312.1 KEGG: kfl:Kfla_5266 epoxide hydrolase domain protein; PFAM: Epoxide hydrolase, N-terminal; Alpha/beta hydrolase fold-1; microsomal epoxide hydrolase 3313241 10364940 Psed_3103 Pseudonocardia dioxanivorans CB1190 microsomal epoxide hydrolase YP_004333153.1 3312108 D 675635 CDS YP_004333154.1 331696915 10364941 3313238..3314122 1 NC_015312.1 KEGG: mil:ML5_5425 periplasmic binding protein; periplasmic binding protein 3314122 10364941 Psed_3104 Pseudonocardia dioxanivorans CB1190 periplasmic binding protein YP_004333154.1 3313238 D 675635 CDS YP_004333155.1 331696916 10364942 complement(3314106..3315239) 1 NC_015312.1 KEGG: mjl:Mjls_1270 ammonia monooxygenase; TIGRFAM: AbrB duplication, membrane protein; PFAM: ammonia monooxygenase; hypothetical protein 3315239 10364942 Psed_3105 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333155.1 3314106 R 675635 CDS YP_004333156.1 331696917 10364943 3315331..3317244 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: rha:RHA1_ro05645 bifunctional ABC lipid A transporter: ATP-binding/permease; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 3317244 10364943 Psed_3106 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004333156.1 3315331 D 675635 CDS YP_004333157.1 331696918 10364944 complement(3317323..3318243) 1 NC_015312.1 KEGG: nfa:nfa6330 hypothetical protein; hypothetical protein 3318243 10364944 Psed_3107 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333157.1 3317323 R 675635 CDS YP_004333158.1 331696919 10364945 3318360..3319061 1 NC_015312.1 KEGG: sen:SACE_5554 hypothetical protein; hypothetical protein 3319061 10364945 Psed_3108 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333158.1 3318360 D 675635 CDS YP_004333159.1 331696920 10364946 3319058..3319849 1 NC_015312.1 KEGG: amd:AMED_3008 hypothetical protein; hypothetical protein 3319849 10364946 Psed_3109 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333159.1 3319058 D 675635 CDS YP_004333160.1 331696921 10364947 complement(3319929..3320753) 1 NC_015312.1 PFAM: Maritimacin/linocin-M18 bacteriocin protein; KEGG: amd:AMED_6577 linocin_M18 bacteriocin protein; Linocin_M18 bacteriocin protein 3320753 10364947 Psed_3110 Pseudonocardia dioxanivorans CB1190 Linocin_M18 bacteriocin protein YP_004333160.1 3319929 R 675635 CDS YP_004333161.1 331696922 10364948 complement(3320761..3321360) 1 NC_015312.1 PFAM: Haemerythrin/HHE cation-binding motif; KEGG: amd:AMED_6576 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 3321360 10364948 Psed_3111 Pseudonocardia dioxanivorans CB1190 hemerythrin HHE cation binding domain-containing protein YP_004333161.1 3320761 R 675635 CDS YP_004333162.1 331696923 10364949 complement(3321407..3322168) 1 NC_015312.1 PFAM: Domain of unknown function DUF1990; KEGG: svi:Svir_21430 hypothetical protein; hypothetical protein 3322168 10364949 Psed_3112 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333162.1 3321407 R 675635 CDS YP_004333163.1 331696924 10364950 complement(3322165..3322443) 1 NC_015312.1 KEGG: svi:Svir_21420 hypothetical protein; hypothetical protein 3322443 10364950 Psed_3113 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333163.1 3322165 R 675635 CDS YP_004333164.1 331696925 10364951 3322450..3323175 1 NC_015312.1 KEGG: sen:SACE_4249 hypothetical protein; hypothetical protein 3323175 10364951 Psed_3114 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333164.1 3322450 D 675635 CDS YP_004333165.1 331696926 10364952 3323245..3323610 1 NC_015312.1 KEGG: rop:ROP_53610 hypothetical protein; hypothetical protein 3323610 10364952 Psed_3115 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333165.1 3323245 D 675635 CDS YP_004333166.1 331696927 10364953 complement(3323672..3324196) 1 NC_015312.1 KEGG: nda:Ndas_3288 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP; hypothetical protein 3324196 10364953 Psed_3116 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333166.1 3323672 R 675635 CDS YP_004333167.1 331696928 10364954 3324360..3325943 1 NC_015312.1 KEGG: aau:AAur_3016 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, YjcE-like, bacteria; PFAM: Cation/H+ exchanger; Na+/H+ antiporter 3325943 10364954 Psed_3117 Pseudonocardia dioxanivorans CB1190 Na+/H+ antiporter YP_004333167.1 3324360 D 675635 CDS YP_004333168.1 331696929 10364955 3326243..3327055 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa34110 short chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 3327055 10364955 Psed_3118 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333168.1 3326243 D 675635 CDS YP_004333169.1 331696930 10364956 3327088..3327777 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_5753 hypothetical protein; TetR family transcriptional regulator 3327777 10364956 Psed_3119 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333169.1 3327088 D 675635 CDS YP_004333170.1 331696931 10364957 complement(3327808..3329526) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; KEGG: tfu:Tfu_0635 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; cysteine ABC transporter permease/ATP-binding protein CydC 3329526 10364957 Psed_3120 Pseudonocardia dioxanivorans CB1190 cysteine ABC transporter permease/ATP-binding protein CydC YP_004333170.1 3327808 R 675635 CDS YP_004333171.1 331696932 10364958 complement(3329523..3331241) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; KEGG: tfu:Tfu_0636 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; cysteine ABC transporter permease/ATP-binding protein CydD 3331241 10364958 Psed_3121 Pseudonocardia dioxanivorans CB1190 cysteine ABC transporter permease/ATP-binding protein CydD YP_004333171.1 3329523 R 675635 CDS YP_004333172.1 331696933 10364959 complement(3331253..3332254) 1 NC_015312.1 KEGG: tfu:Tfu_0637 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 3332254 10364959 Psed_3122 Pseudonocardia dioxanivorans CB1190 cytochrome d ubiquinol oxidase subunit II YP_004333172.1 3331253 R 675635 CDS YP_004333173.1 331696934 10364960 complement(3332266..3333738) 1 NC_015312.1 PFAM: Cytochrome d ubiquinol oxidase, subunit I; KEGG: tfu:Tfu_0638 cytochrome oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 3333738 10364960 Psed_3123 Pseudonocardia dioxanivorans CB1190 cytochrome bd ubiquinol oxidase subunit I YP_004333173.1 3332266 R 675635 CDS YP_004333174.1 331696935 10364961 3333940..3335862 1 NC_015312.1 KEGG: ami:Amir_6419 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; methylmalonyl-CoA mutase 3335862 10364961 Psed_3124 Pseudonocardia dioxanivorans CB1190 methylmalonyl-CoA mutase YP_004333174.1 3333940 D 675635 CDS YP_004333175.1 331696936 10364962 3335859..3338039 1 NC_015312.1 TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: amd:AMED_0914 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; methylmalonyl-CoA mutase large subunit 3338039 10364962 Psed_3125 Pseudonocardia dioxanivorans CB1190 methylmalonyl-CoA mutase large subunit YP_004333175.1 3335859 D 675635 CDS YP_004333176.1 331696937 10364963 3338040..3339023 1 NC_015312.1 TIGRFAM: ArgK protein; PFAM: ArgK protein; KEGG: nda:Ndas_5546 LAO/AO transport system ATPase; SMART: ATPase, AAA+ type, core; LAO/AO transport system ATPase 3339023 10364963 Psed_3126 Pseudonocardia dioxanivorans CB1190 LAO/AO transport system ATPase YP_004333176.1 3338040 D 675635 CDS YP_004333177.1 331696938 10364964 3339126..3340355 1 NC_015312.1 PFAM: Ribonuclease BN-related; KEGG: gob:Gobs_1038 ribonuclease BN; ribonuclease BN 3340355 10364964 Psed_3127 Pseudonocardia dioxanivorans CB1190 ribonuclease BN YP_004333177.1 3339126 D 675635 CDS YP_004333178.1 331696939 10364965 complement(3340522..3341289) 1 NC_015312.1 PFAM: Aldehyde-lyase domain; KEGG: sen:SACE_0699 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HpcH/HpaI aldolase 3341289 10364965 Psed_3128 Pseudonocardia dioxanivorans CB1190 HpcH/HpaI aldolase YP_004333178.1 3340522 R 675635 CDS YP_004333179.1 331696940 10364966 3341412..3342254 1 NC_015312.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: sen:SACE_6637 membrane-bound metal-dependent hydrolase; hypothetical protein 3342254 10364966 Psed_3129 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333179.1 3341412 D 675635 CDS YP_004333180.1 331696941 10364967 3342269..3343129 1 NC_015312.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, , C-terminal; KEGG: fra:Francci3_1825 hypothetical protein; phosphogluconate dehydrogenase, NAD-binding protein 3343129 10364967 Psed_3130 Pseudonocardia dioxanivorans CB1190 phosphogluconate dehydrogenase, NAD-binding protein YP_004333180.1 3342269 D 675635 CDS YP_004333181.1 331696942 10364968 complement(3343145..3343309) 1 NC_015312.1 hypothetical protein 3343309 10364968 Psed_3131 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333181.1 3343145 R 675635 CDS YP_004333182.1 331696943 10364969 complement(3343584..3344765) 1 NC_015312.1 KEGG: mjl:Mjls_5013 cytochrome P450; cytochrome P450 3344765 10364969 Psed_3132 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004333182.1 3343584 R 675635 CDS YP_004333183.1 331696944 10364970 complement(3345306..3346637) 1 NC_015312.1 PFAM: Domain of unknown function DUF1254; Domain of unknown function DUF1214; KEGG: cyn:Cyan7425_2480 protein of unknown function DUF1254; hypothetical protein 3346637 10364970 Psed_3133 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333183.1 3345306 R 675635 CDS YP_004333184.1 331696945 10364972 complement(3347007..3347630) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: mav:MAV_0227 hypothetical protein; hypothetical protein 3347630 10364972 Psed_3135 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333184.1 3347007 R 675635 CDS YP_004333185.1 331696946 10364973 3347908..3348831 1 NC_015312.1 KEGG: scb:SCAB_1521 hydrolase; hydrolase 3348831 10364973 Psed_3136 Pseudonocardia dioxanivorans CB1190 hydrolase YP_004333185.1 3347908 D 675635 CDS YP_004333186.1 331696947 10364974 complement(3348844..3350364) 1 NC_015312.1 TIGRFAM: F420-dependent oxidoreductase, MSMEG2906; KEGG: svi:Svir_27940 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; F420-dependent oxidoreductase 3350364 10364974 Psed_3137 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004333186.1 3348844 R 675635 CDS YP_004333187.1 331696948 10364975 3350577..3351164 1 NC_015312.1 PFAM: Protein of unknown function DUF742; KEGG: sen:SACE_0559 hypothetical protein; hypothetical protein 3351164 10364975 Psed_3138 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333187.1 3350577 D 675635 CDS YP_004333188.1 331696949 10364976 3351208..3352449 1 NC_015312.1 KEGG: mrd:Mrad2831_2474 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; isovaleryl-CoA dehydrogenase 3352449 10364976 Psed_3139 Pseudonocardia dioxanivorans CB1190 isovaleryl-CoA dehydrogenase YP_004333188.1 3351208 D 675635 CDS YP_004333189.1 331696950 10364977 3352555..3353160 1 NC_015312.1 manually curated; KEGG: amd:AMED_8046 ArsR family transcriptional regulator; ArsR family transcriptional regulator 3353160 10364977 Psed_3140 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004333189.1 3352555 D 675635 CDS YP_004333190.1 331696951 10364978 3353170..3353619 1 NC_015312.1 KEGG: gob:Gobs_3724 hypothetical protein; hypothetical protein 3353619 10364978 Psed_3141 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333190.1 3353170 D 675635 CDS YP_004333191.1 331696952 10364979 complement(3354074..3354475) 1 NC_015312.1 hypothetical protein 3354475 10364979 Psed_3142 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333191.1 3354074 R 675635 CDS YP_004333192.1 331696953 10364980 complement(3354606..3357128) 1 NC_015312.1 KEGG: mil:ML5_2272 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 3357128 10364980 Psed_3143 Pseudonocardia dioxanivorans CB1190 DEAD/DEAH box helicase domain-containing protein YP_004333192.1 3354606 R 675635 CDS YP_004333193.1 331696954 10364981 3357414..3359222 1 NC_015312.1 PFAM: Signal transduction histidine kinase, internal region; DNA ligase, ATP-dependent, central; KEGG: cai:Caci_5248 DNA polymerase LigD, ligase domain protein; histidine kinase 3359222 10364981 Psed_3144 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004333193.1 3357414 D 675635 CDS YP_004333194.1 331696955 10364982 3359282..3360028 1 NC_015312.1 KEGG: tbi:Tbis_2886 beta-phosphoglucomutase hydrolase; TIGRFAM: Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; beta-phosphoglucomutase hydrolase 3360028 10364982 Psed_3145 Pseudonocardia dioxanivorans CB1190 beta-phosphoglucomutase hydrolase YP_004333194.1 3359282 D 675635 CDS YP_004333195.1 331696956 10364983 3360025..3362385 1 NC_015312.1 KEGG: tcu:Tcur_2817 glycoside hydrolase 65 central catalytic; PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; Kojibiose phosphorylase 3362385 10364983 Psed_3146 Pseudonocardia dioxanivorans CB1190 Kojibiose phosphorylase YP_004333195.1 3360025 D 675635 CDS YP_004333196.1 331696957 10364984 complement(3362401..3363267) 1 NC_015312.1 KEGG: sen:SACE_5686 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; SigB/F/G subfamily RNA polymerase sigma-28 subunit 3363267 10364984 Psed_3147 Pseudonocardia dioxanivorans CB1190 SigB/F/G subfamily RNA polymerase sigma-28 subunit YP_004333196.1 3362401 R 675635 CDS YP_004333197.1 331696958 10364985 3363392..3365788 1 NC_015312.1 PFAM: DNA helicase, UvrD/REP type; KEGG: ami:Amir_1311 superfamily I DNA and RNA helicase-like protein; UvrD/REP helicase 3365788 10364985 Psed_3148 Pseudonocardia dioxanivorans CB1190 UvrD/REP helicase YP_004333197.1 3363392 D 675635 CDS YP_004333198.1 331696959 10364986 complement(3365766..3366524) 1 NC_015312.1 PFAM: Peptidase C26; KEGG: mbt:JTY_2876 amidotransferase; peptidase C26 3366524 10364986 Psed_3149 Pseudonocardia dioxanivorans CB1190 peptidase C26 YP_004333198.1 3365766 R 675635 CDS YP_004333199.1 331696960 10364987 complement(3366535..3368355) 1 NC_015312.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: sen:SACE_3331 ATP-dependent DNA helicase; SMART: RQC domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; ATP-dependent DNA helicase RecQ 3368355 10364987 Psed_3150 Pseudonocardia dioxanivorans CB1190 ATP-dependent DNA helicase RecQ YP_004333199.1 3366535 R 675635 CDS YP_004333200.1 331696961 10364988 3368538..3369542 1 NC_015312.1 KEGG: amd:AMED_3381 flavin-dependent oxidoreductase; TIGRFAM: Glucose-6-phosphate dehydrogenase, F420-dependent; Glucose-6-phosphate dehydrogenase-related, F420-dependent; PFAM: Luciferase-like, subgroup; glucose-6-phosphate dehydrogenase, F420-dependent 3369542 10364988 Psed_3151 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate dehydrogenase, F420-dependent YP_004333200.1 3368538 D 675635 CDS YP_004333201.1 331696962 10364989 3369694..3370233 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; KEGG: ami:Amir_3736 PAS/PAC sensor protein; ATP-binding protein 3370233 10364989 Psed_3152 Pseudonocardia dioxanivorans CB1190 ATP-binding protein YP_004333201.1 3369694 D 675635 CDS YP_004333202.1 331696963 10364990 3370322..3370573 1 NC_015312.1 hypothetical protein 3370573 10364990 Psed_3153 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333202.1 3370322 D 675635 CDS YP_004333203.1 331696964 10364991 complement(3370653..3371510) 1 NC_015312.1 PFAM: Bacterial transcriptional activator domain; KEGG: cwo:Cwoe_4971 transcriptional regulator, SARP family; SARP family transcriptional regulator 3371510 10364991 Psed_3154 Pseudonocardia dioxanivorans CB1190 SARP family transcriptional regulator YP_004333203.1 3370653 R 675635 CDS YP_004333204.1 331696965 10364992 complement(3371705..3372655) 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; KEGG: sen:SACE_4200 regulator of sigma factor; ATP-binding protein 3372655 10364992 Psed_3155 Pseudonocardia dioxanivorans CB1190 ATP-binding protein YP_004333204.1 3371705 R 675635 CDS YP_004333205.1 331696966 10364993 complement(3372652..3373659) 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: scb:SCAB_63591 hypothetical protein; sulfate transporter/antisigma-factor antagonist STAS 3373659 10364993 Psed_3156 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004333205.1 3372652 R 675635 CDS YP_004333206.1 331696967 10364994 complement(3373883..3375457) 1 NC_015312.1 KEGG: tcu:Tcur_0107 thiamine pyrophosphate protein domain-containing protein TPP-binding protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; benzoylformate decarboxylase 3375457 10364994 Psed_3157 Pseudonocardia dioxanivorans CB1190 benzoylformate decarboxylase YP_004333206.1 3373883 R 675635 CDS YP_004333207.1 331696968 10364995 complement(3375454..3375972) 1 NC_015312.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: amd:AMED_5928 OsmC family protein; OsmC family protein 3375972 10364995 Psed_3158 Pseudonocardia dioxanivorans CB1190 OsmC family protein YP_004333207.1 3375454 R 675635 CDS YP_004333208.1 331696969 10364996 3376043..3376717 1 NC_015312.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ami:Amir_5358 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 3376717 10364996 Psed_3159 Pseudonocardia dioxanivorans CB1190 CDP-alcohol phosphatidyltransferase YP_004333208.1 3376043 D 675635 CDS YP_004333209.1 331696970 10364997 3376891..3377337 1 NC_015312.1 KEGG: ami:Amir_5356 FHA domain containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; FHA domain-containing protein 3377337 10364997 Psed_3160 Pseudonocardia dioxanivorans CB1190 FHA domain-containing protein YP_004333209.1 3376891 D 675635 CDS YP_004333210.1 331696971 10364998 3377646..3378122 1 NC_015312.1 PFAM: Domain of unknown function DUF151; KEGG: sen:SACE_3844 hypothetical protein; hypothetical protein 3378122 10364998 Psed_3161 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333210.1 3377646 D 675635 CDS YP_004333211.1 331696972 10364999 3378232..3378855 1 NC_015312.1 KEGG: req:REQ_24440 MerR family transcriptional regulator; manually curated; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 3378855 10364999 Psed_3162 Pseudonocardia dioxanivorans CB1190 regulatory protein MerR YP_004333211.1 3378232 D 675635 CDS YP_004333212.1 331696973 10365000 3379244..3382138 1 NC_015312.1 TIGRFAM: Glycine cleavage system P protein, homodimeric; HAMAP: Glycine cleavage system P protein, homodimeric; KEGG: ami:Amir_5352 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; Aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase 3382138 10365000 Psed_3163 Pseudonocardia dioxanivorans CB1190 glycine dehydrogenase YP_004333212.1 3379244 D 675635 CDS YP_004333213.1 331696974 10365001 complement(3382191..3383072) 1 NC_015312.1 KEGG: amd:AMED_4975 hypothetical protein; hypothetical protein 3383072 10365001 Psed_3164 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333213.1 3382191 R 675635 CDS YP_004333214.1 331696975 10365002 complement(3383069..3383194) 1 NC_015312.1 hypothetical protein 3383194 10365002 Psed_3165 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333214.1 3383069 R 675635 CDS YP_004333215.1 331696976 10365003 complement(3383241..3384293) 1 NC_015312.1 KEGG: amd:AMED_4974 CBS domain-containing protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; hypothetical protein 3384293 10365003 Psed_3166 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333215.1 3383241 R 675635 CDS YP_004333216.1 331696977 10365004 complement(3384283..3385617) 1 NC_015312.1 PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: ami:Amir_5344 protein of unknown function DUF21; hypothetical protein 3385617 10365004 Psed_3167 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333216.1 3384283 R 675635 CDS YP_004333217.1 331696978 10365005 complement(3385806..3386933) 1 NC_015312.1 KEGG: amd:AMED_1128 hypothetical protein; hypothetical protein 3386933 10365005 Psed_3168 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333217.1 3385806 R 675635 CDS YP_004333218.1 331696979 10365006 3387182..3388144 1 NC_015312.1 TIGRFAM: Bacterial pantothenate kinase; HAMAP: Bacterial pantothenate kinase; KEGG: kfl:Kfla_6049 pantothenate kinase; Pantothenate kinase 3388144 10365006 Psed_3169 Pseudonocardia dioxanivorans CB1190 Pantothenate kinase YP_004333218.1 3387182 D 675635 CDS YP_004333219.1 331696980 10365007 3388289..3388780 1 NC_015312.1 KEGG: cai:Caci_2307 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3388780 10365007 Psed_3170 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004333219.1 3388289 D 675635 CDS YP_004333220.1 331696981 10365008 complement(3388790..3389587) 1 NC_015312.1 PFAM: Protein of unknown function DUF427; KEGG: sna:Snas_3697 hypothetical protein; hypothetical protein 3389587 10365008 Psed_3171 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333220.1 3388790 R 675635 CDS YP_004333221.1 331696982 10365009 3389826..3391637 1 NC_015312.1 KEGG: svi:Svir_32540 protein kinase protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 3391637 10365009 Psed_3172 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004333221.1 3389826 D 675635 CDS YP_004333222.1 331696983 10365010 complement(3391698..3392504) 1 NC_015312.1 PFAM: Protein of unknown function DUF81; KEGG: nml:Namu_3379 hypothetical protein; hypothetical protein 3392504 10365010 Psed_3173 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333222.1 3391698 R 675635 CDS YP_004333223.1 331696984 10365011 3392681..3393340 1 NC_015312.1 KEGG: amd:AMED_0183 hypothetical protein; hypothetical protein 3393340 10365011 Psed_3174 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333223.1 3392681 D 675635 CDS YP_004333224.1 331696985 10365012 3393434..3394186 1 NC_015312.1 KEGG: gob:Gobs_3816 hypothetical protein; hypothetical protein 3394186 10365012 Psed_3175 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333224.1 3393434 D 675635 CDS YP_004333225.1 331696986 10365013 3394271..3394666 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: rha:RHA1_ro02869 ArsR family transcriptional regulator; HxlR family transcriptional regulator 3394666 10365013 Psed_3176 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004333225.1 3394271 D 675635 CDS YP_004333226.1 331696987 10365014 complement(3394729..3395349) 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: rop:ROP_36530 hypothetical protein; nitroreductase 3395349 10365014 Psed_3177 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004333226.1 3394729 R 675635 CDS YP_004333227.1 331696988 10365015 3395465..3396271 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: scb:SCAB_7431 hypothetical protein; type 11 methyltransferase 3396271 10365015 Psed_3178 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004333227.1 3395465 D 675635 CDS YP_004333228.1 331696989 10365016 complement(3396243..3396956) 1 NC_015312.1 KEGG: sma:SAV_2438 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 3396956 10365016 Psed_3179 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004333228.1 3396243 R 675635 CDS YP_004333229.1 331696990 10365017 complement(3396953..3398164) 1 NC_015312.1 KEGG: sco:SCO5824 two-component sensor; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 3398164 10365017 Psed_3180 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004333229.1 3396953 R 675635 CDS YP_004333230.1 331696991 10365018 3398344..3398766 1 NC_015312.1 KEGG: amd:AMED_4550 hypothetical protein; hypothetical protein 3398766 10365018 Psed_3181 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333230.1 3398344 D 675635 CDS YP_004333231.1 331696992 10365019 3398816..3398974 1 NC_015312.1 hypothetical protein 3398974 10365019 Psed_3182 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333231.1 3398816 D 675635 CDS YP_004333232.1 331696993 10365020 3398979..3399824 1 NC_015312.1 PFAM: UspA; KEGG: mil:ML5_5167 UspA domain-containing protein; UspA domain-containing protein 3399824 10365020 Psed_3183 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004333232.1 3398979 D 675635 CDS YP_004333233.1 331696994 10365021 complement(3399954..3401669) 1 NC_015312.1 TIGRFAM: Allophanate hydrolase; KEGG: sma:SAV_6697 allophanate hydrolase; PFAM: Amidase; allophanate hydrolase 3401669 10365021 Psed_3184 Pseudonocardia dioxanivorans CB1190 allophanate hydrolase YP_004333233.1 3399954 R 675635 CDS YP_004333234.1 331696995 10365022 complement(3401662..3402069) 1 NC_015312.1 KEGG: ccs:CCNA_02697 hypothetical protein; hypothetical protein 3402069 10365022 Psed_3185 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333234.1 3401662 R 675635 CDS YP_004333235.1 331696996 10365023 complement(3402066..3402773) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: cai:Caci_6450 isochorismatase hydrolase; isochorismatase hydrolase 3402773 10365023 Psed_3186 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004333235.1 3402066 R 675635 CDS YP_004333236.1 331696997 10365024 complement(3402773..3403522) 1 NC_015312.1 KEGG: fal:FRAAL6172 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 3403522 10365024 Psed_3187 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333236.1 3402773 R 675635 CDS YP_004333237.1 331696998 10365025 complement(3403519..3404553) 1 NC_015312.1 TIGRFAM: Amidohydrolase ring-opening, AtzD/TrzD; KEGG: azc:AZC_3892 cyanuric acid amidohydrolase; PFAM: Amidohydrolase ring-opening, AtzD/TrzD; ring-opening amidohydrolase 3404553 10365025 Psed_3188 Pseudonocardia dioxanivorans CB1190 ring-opening amidohydrolase YP_004333237.1 3403519 R 675635 CDS YP_004333238.1 331696999 10365026 complement(3404594..3405664) 1 NC_015312.1 KEGG: ske:Sked_01070 monosaccharide-binding protein; hypothetical protein 3405664 10365026 Psed_3189 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333238.1 3404594 R 675635 CDS YP_004333239.1 331697000 10365027 complement(3405746..3406846) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: rhi:NGR_c06530 hypothetical ABC transporter permease; ABC transporter permease 3406846 10365027 Psed_3190 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333239.1 3405746 R 675635 CDS YP_004333240.1 331697001 10365028 complement(3406843..3408387) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: req:REQ_19950 abc transporter atpase suunit; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 3408387 10365028 Psed_3191 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004333240.1 3406843 R 675635 CDS YP_004333241.1 331697002 10365029 complement(3408384..3409415) 1 NC_015312.1 KEGG: mpo:Mpop_4351 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; flavanone 3-dioxygenase 3409415 10365029 Psed_3192 Pseudonocardia dioxanivorans CB1190 flavanone 3-dioxygenase YP_004333241.1 3408384 R 675635 CDS YP_004333242.1 331697003 10365030 3409668..3410144 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: acr:Acry_0320 cupin 2 domain-containing protein; cupin 3410144 10365030 Psed_3193 Pseudonocardia dioxanivorans CB1190 cupin YP_004333242.1 3409668 D 675635 CDS YP_004333243.1 331697004 10365031 complement(3410146..3411372) 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:bll6080 hypothetical protein; FAD dependent oxidoreductase 3411372 10365031 Psed_3194 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004333243.1 3410146 R 675635 CDS YP_004333244.1 331697005 10365032 3411610..3413052 1 NC_015312.1 KEGG: fre:Franean1_5399 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; (R)-6-hydroxynicotine oxidase 3413052 10365032 Psed_3195 Pseudonocardia dioxanivorans CB1190 (R)-6-hydroxynicotine oxidase YP_004333244.1 3411610 D 675635 CDS YP_004333245.1 331697006 10365035 complement(3415351..3415740) 1 NC_015312.1 hypothetical protein 3415740 10365035 Psed_3198 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333245.1 3415351 R 675635 CDS YP_004333246.1 331697007 10365036 3416418..3416675 1 NC_015312.1 hypothetical protein 3416675 10365036 Psed_3199 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333246.1 3416418 D 675635 CDS YP_004333247.1 331697008 10365037 complement(3416650..3417393) 1 NC_015312.1 PFAM: Protein of unknown function DUF2249; KEGG: msv:Mesil_0266 protein of unknown function DUF2249; hypothetical protein 3417393 10365037 Psed_3200 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333247.1 3416650 R 675635 CDS YP_004333248.1 331697009 10365038 3417539..3417901 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: rop:ROP_00820 7Fe ferredoxin; 4Fe-4S ferredoxin 3417901 10365038 Psed_3201 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004333248.1 3417539 D 675635 CDS YP_004333249.1 331697010 10365039 3417894..3418559 1 NC_015312.1 KEGG: rha:RHA1_ro08261 MarR family transcriptional regulator; transcriptional regulator 3418559 10365039 Psed_3202 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004333249.1 3417894 D 675635 CDS YP_004333250.1 331697011 10365040 3418784..3419677 1 NC_015312.1 KEGG: sna:Snas_5097 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 3419677 10365040 Psed_3203 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004333250.1 3418784 D 675635 CDS YP_004333251.1 331697012 10365041 3420033..3421145 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: rop:ROP_48590 hypothetical protein; ABC transporter substrate-binding protein 3421145 10365041 Psed_3204 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333251.1 3420033 D 675635 CDS YP_004333252.1 331697013 10365042 3421230..3422945 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_4451 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 3422945 10365042 Psed_3205 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333252.1 3421230 D 675635 CDS YP_004333253.1 331697014 10365043 3423020..3424162 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: fre:Franean1_4452 ABC transporter related; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 3424162 10365043 Psed_3206 Pseudonocardia dioxanivorans CB1190 polyamine-transporting ATPase YP_004333253.1 3423020 D 675635 CDS YP_004333254.1 331697015 10365044 3424165..3425355 1 NC_015312.1 KEGG: rce:RC1_3257 alpha-methylacyl-CoA racemase; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase 3425355 10365044 Psed_3207 Pseudonocardia dioxanivorans CB1190 alpha-methylacyl-CoA racemase YP_004333254.1 3424165 D 675635 CDS YP_004333255.1 331697016 10365045 complement(3425367..3426590) 1 NC_015312.1 KEGG: axy:AXYL_05906 CoA-transferase III family protein 46; PFAM: CoA-transferase III; formyl-CoA transferase 3426590 10365045 Psed_3208 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004333255.1 3425367 R 675635 CDS YP_004333256.1 331697017 10365046 complement(3426666..3427442) 1 NC_015312.1 KEGG: chy:CHY_1745 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 3427442 10365046 Psed_3209 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333256.1 3426666 R 675635 CDS YP_004333257.1 331697018 10365047 3427497..3428663 1 NC_015312.1 KEGG: rer:RER_07930 hypothetical protein; hypothetical protein 3428663 10365047 Psed_3210 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333257.1 3427497 D 675635 CDS YP_004333258.1 331697019 10365048 3428660..3429058 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: rer:RER_07920 hypothetical protein; hypothetical protein 3429058 10365048 Psed_3211 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333258.1 3428660 D 675635 CDS YP_004333259.1 331697020 10365049 3429055..3430215 1 NC_015312.1 KEGG: mav:MAV_4237 YfdE protein; PFAM: CoA-transferase III; formyl-CoA transferase 3430215 10365049 Psed_3212 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004333259.1 3429055 D 675635 CDS YP_004333260.1 331697021 10365050 3430212..3430991 1 NC_015312.1 PFAM: Crotonase, core; KEGG: fal:FRAAL3799 enoyl-CoA hydratase; enoyl-CoA hydratase 3430991 10365050 Psed_3213 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004333260.1 3430212 D 675635 CDS YP_004333261.1 331697022 10365051 complement(3431350..3432231) 1 NC_015312.1 KEGG: saq:Sare_0388 NmrA family protein; NmrA family protein 3432231 10365051 Psed_3214 Pseudonocardia dioxanivorans CB1190 NmrA family protein YP_004333261.1 3431350 R 675635 CDS YP_004333262.1 331697023 10365052 3432334..3432891 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mxa:MXAN_2145 TetR family transcriptional regulator; TetR family transcriptional regulator 3432891 10365052 Psed_3215 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333262.1 3432334 D 675635 CDS YP_004333263.1 331697024 10365053 complement(3432900..3434189) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_0210 luciferase protein; luciferase-like protein 3434189 10365053 Psed_3216 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004333263.1 3432900 R 675635 CDS YP_004333264.1 331697025 10365054 complement(3434200..3435078) 1 NC_015312.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: fri:FraEuI1c_5766 SMP-30/gluconolaconase/LRE-like region-containing protein; SMP-30/Gluconolaconase/LRE-like region-containing protein 3435078 10365054 Psed_3217 Pseudonocardia dioxanivorans CB1190 SMP-30/Gluconolaconase/LRE-like region-containing protein YP_004333264.1 3434200 R 675635 CDS YP_004333265.1 331697026 10365055 3435334..3436485 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: msm:MSMEG_5626 luciferase; luciferase-like protein 3436485 10365055 Psed_3218 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004333265.1 3435334 D 675635 CDS YP_004333266.1 331697027 10365056 complement(3436637..3437476) 1 NC_015312.1 KEGG: bpm:BURPS1710b_A1438 hypothetical protein; hypothetical protein 3437476 10365056 Psed_3219 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333266.1 3436637 R 675635 CDS YP_004333267.1 331697028 10365057 3437570..3438706 1 NC_015312.1 PFAM: Carboxylesterase, type B; KEGG: sro:Sros_0321 carboxylesterase; carboxylesterase type B 3438706 10365057 Psed_3220 Pseudonocardia dioxanivorans CB1190 carboxylesterase type B YP_004333267.1 3437570 D 675635 CDS YP_004333268.1 331697029 10365058 3438830..3440644 1 NC_015312.1 KEGG: hne:HNE_1286 cyclododecanone monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; phenylacetone monooxygenase 3440644 10365058 Psed_3221 Pseudonocardia dioxanivorans CB1190 phenylacetone monooxygenase YP_004333268.1 3438830 D 675635 CDS YP_004333269.1 331697030 10365059 3440652..3441890 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: fri:FraEuI1c_1886 amidohydrolase 2; amidohydrolase 3441890 10365059 Psed_3222 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004333269.1 3440652 D 675635 CDS YP_004333270.1 331697031 10365060 3441982..3443007 1 NC_015312.1 KEGG: nml:Namu_5169 alpha/beta hydrolase fold-3 domain-containing protein; alpha/beta hydrolase 3443007 10365060 Psed_3223 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004333270.1 3441982 D 675635 CDS YP_004333271.1 331697032 10365061 complement(3443376..3444293) 1 NC_015312.1 KEGG: mav:MAV_3101 oxidoreductase, short chain dehydrogenase/reductase protein; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3444293 10365061 Psed_3224 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333271.1 3443376 R 675635 CDS YP_004333272.1 331697033 10365062 complement(3444508..3445995) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_5274 hypothetical protein; major facilitator superfamily protein 3445995 10365062 Psed_3225 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333272.1 3444508 R 675635 CDS YP_004333273.1 331697034 10365063 complement(3446256..3446873) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_13230 TetR family transcriptional regulator; TetR family transcriptional regulator 3446873 10365063 Psed_3226 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333273.1 3446256 R 675635 CDS YP_004333274.1 331697035 10365064 complement(3446934..3447557) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rmr:Rmar_2200 transcriptional regulator, TetR family; TetR family transcriptional regulator 3447557 10365064 Psed_3227 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333274.1 3446934 R 675635 CDS YP_004333275.1 331697036 10365065 complement(3447654..3448415) 1 NC_015312.1 KEGG: cwo:Cwoe_2765 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 3448415 10365065 Psed_3228 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333275.1 3447654 R 675635 CDS YP_004333276.1 331697037 10365066 3448619..3450109 1 NC_015312.1 KEGG: mav:MAV_5241 monooxygenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4-hydroxyacetophenone monooxygenase 3450109 10365066 Psed_3229 Pseudonocardia dioxanivorans CB1190 4-hydroxyacetophenone monooxygenase YP_004333276.1 3448619 D 675635 CDS YP_004333277.1 331697038 10365067 3450106..3450567 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 3450567 10365067 Psed_3230 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004333277.1 3450106 D 675635 CDS YP_004333278.1 331697039 10365068 3450554..3450898 1 NC_015312.1 hypothetical protein 3450898 10365068 Psed_3231 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333278.1 3450554 D 675635 CDS YP_004333279.1 331697040 10365069 3450898..3452991 1 NC_015312.1 KEGG: swi:Swit_3075 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 3452991 10365069 Psed_3232 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004333279.1 3450898 D 675635 CDS YP_004333280.1 331697041 10365070 3452988..3454811 1 NC_015312.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: reu:Reut_C6222 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 3454811 10365070 Psed_3233 Pseudonocardia dioxanivorans CB1190 hydantoinase B/oxoprolinase YP_004333280.1 3452988 D 675635 CDS YP_004333281.1 331697042 10365071 3454813..3455733 1 NC_015312.1 KEGG: amt:Amet_1190 hypothetical protein; hypothetical protein 3455733 10365071 Psed_3234 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333281.1 3454813 D 675635 CDS YP_004333282.1 331697043 10365072 3455733..3457478 1 NC_015312.1 KEGG: cwo:Cwoe_4447 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 3457478 10365072 Psed_3235 Pseudonocardia dioxanivorans CB1190 dihydroxy-acid dehydratase YP_004333282.1 3455733 D 675635 CDS YP_004333283.1 331697044 10365073 3457727..3458737 1 NC_015312.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: msm:MSMEG_5845 C4-dicarboxylate transporter; C4-dicarboxylate transporter/malic acid transport protein 3458737 10365073 Psed_3236 Pseudonocardia dioxanivorans CB1190 C4-dicarboxylate transporter/malic acid transport protein YP_004333283.1 3457727 D 675635 CDS YP_004333284.1 331697045 10365076 3459838..3460188 1 NC_015312.1 KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 3460188 10365076 Psed_3239 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004333284.1 3459838 D 675635 CDS YP_004333285.1 331697046 10365077 3460228..3461652 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: aau:AAur_pTC20138 branched-chain amino acid ABC transporter; ABC transporter substrate-binding protein 3461652 10365077 Psed_3240 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333285.1 3460228 D 675635 CDS YP_004333286.1 331697047 10365078 3461736..3463265 1 NC_015312.1 PFAM: Amidase; KEGG: rha:RHA1_ro00359 amidase; amidase 3463265 10365078 Psed_3241 Pseudonocardia dioxanivorans CB1190 amidase YP_004333286.1 3461736 D 675635 CDS YP_004333287.1 331697048 10365079 3463262..3463945 1 NC_015312.1 KEGG: aau:AAur_pTC20147 cobalt-containing nitrile hydratase beta subunit; nitrile hydratase 3463945 10365079 Psed_3242 Pseudonocardia dioxanivorans CB1190 nitrile hydratase YP_004333287.1 3463262 D 675635 CDS YP_004333288.1 331697049 10365080 3463957..3464565 1 NC_015312.1 TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 3464565 10365080 Psed_3243 Pseudonocardia dioxanivorans CB1190 nitrile hydratase subunit alpha YP_004333288.1 3463957 D 675635 CDS YP_004333289.1 331697050 10365081 3464562..3464969 1 NC_015312.1 KEGG: aau:AAur_pTC20145 nitrile hydratase b-subunit; nitrile hydratase b-subunit 3464969 10365081 Psed_3244 Pseudonocardia dioxanivorans CB1190 nitrile hydratase b-subunit YP_004333289.1 3464562 D 675635 CDS YP_004333290.1 331697051 10365082 complement(3465648..3468665) 1 NC_015312.1 KEGG: tcu:Tcur_0744 ATPase-like protein; ATPase-like protein 3468665 10365082 Psed_3245 Pseudonocardia dioxanivorans CB1190 ATPase-like protein YP_004333290.1 3465648 R 675635 CDS YP_004333291.1 331697052 10365083 complement(3468687..3469766) 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: htu:Htur_1034 methyltransferase type 12; type 12 methyltransferase 3469766 10365083 Psed_3246 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004333291.1 3468687 R 675635 CDS YP_004333292.1 331697053 10365084 3469882..3470169 1 NC_015312.1 hypothetical protein 3470169 10365084 Psed_3247 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333292.1 3469882 D 675635 CDS YP_004333293.1 331697054 10365085 3470166..3471635 1 NC_015312.1 PFAM: Amidase; KEGG: dbr:Deba_2444 amidase; amidase 3471635 10365085 Psed_3248 Pseudonocardia dioxanivorans CB1190 amidase YP_004333293.1 3470166 D 675635 CDS YP_004333294.1 331697055 10365086 complement(3471814..3472581) 1 NC_015312.1 KEGG: cai:Caci_3872 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 3472581 10365086 Psed_3249 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004333294.1 3471814 R 675635 CDS YP_004333295.1 331697056 10365087 complement(3472578..3474239) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: cai:Caci_3873 integrase catalytic region; integrase catalytic subunit 3474239 10365087 Psed_3250 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004333295.1 3472578 R 675635 CDS YP_004333296.1 331697057 10365089 complement(3475009..3476220) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: sna:Snas_4581 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein 3476220 10365089 Psed_3252 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004333296.1 3475009 R 675635 CDS YP_004333297.1 331697058 10365090 complement(3476217..3476837) 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: fri:FraEuI1c_3813 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 3476837 10365090 Psed_3253 Pseudonocardia dioxanivorans CB1190 PadR-like family transcriptional regulator YP_004333297.1 3476217 R 675635 CDS YP_004333298.1 331697059 10365091 complement(3477411..3477764) 1 NC_015312.1 KEGG: ami:Amir_1576 hypothetical protein; hypothetical protein 3477764 10365091 Psed_3254 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333298.1 3477411 R 675635 CDS YP_004333299.1 331697060 10365093 complement(3478687..3478968) 1 NC_015312.1 KEGG: vcn:VOLCADRAFT_89522 hypothetical protein; hypothetical protein 3478968 10365093 Psed_3256 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333299.1 3478687 R 675635 CDS YP_004333300.1 331697061 10365094 complement(3479231..3480019) 1 NC_015312.1 KEGG: ade:Adeh_1681 PE-PGRS family protein; PE-PGRS family protein 3480019 10365094 Psed_3257 Pseudonocardia dioxanivorans CB1190 PE-PGRS family protein YP_004333300.1 3479231 R 675635 CDS YP_004333301.1 331697062 10365095 complement(3480057..3480491) 1 NC_015312.1 KEGG: nml:Namu_3635 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3480491 10365095 Psed_3258 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004333301.1 3480057 R 675635 CDS YP_004333302.1 331697063 10365096 3480600..3480884 1 NC_015312.1 hypothetical protein 3480884 10365096 Psed_3259 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333302.1 3480600 D 675635 CDS YP_004333303.1 331697064 10365097 3480960..3481862 1 NC_015312.1 KEGG: nml:Namu_3637 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 3481862 10365097 Psed_3260 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333303.1 3480960 D 675635 CDS YP_004333304.1 331697065 10365098 3481859..3482281 1 NC_015312.1 PFAM: Protein of unknown function DUF488; KEGG: nfa:nfa31460 hypothetical protein; hypothetical protein 3482281 10365098 Psed_3261 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333304.1 3481859 D 675635 CDS YP_004333305.1 331697066 10365099 complement(3482351..3483067) 1 NC_015312.1 KEGG: sro:Sros_7232 hypothetical protein; hypothetical protein 3483067 10365099 Psed_3262 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333305.1 3482351 R 675635 CDS YP_004333306.1 331697067 10365100 3483310..3484053 1 NC_015312.1 KEGG: amd:AMED_4650 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 3484053 10365100 Psed_3263 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004333306.1 3483310 D 675635 CDS YP_004333307.1 331697068 10365101 complement(3484063..3484185) 1 NC_015312.1 hypothetical protein 3484185 10365101 Psed_3264 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333307.1 3484063 R 675635 CDS YP_004333308.1 331697069 10365102 complement(3484182..3485393) 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: bbt:BBta_0729 cytochrome P450; cytochrome P450 3485393 10365102 Psed_3265 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004333308.1 3484182 R 675635 CDS YP_004333309.1 331697070 10365103 complement(3485592..3487982) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: req:REQ_24000 excinuclease abc subunit a UvrA1; ABC transporter 3487982 10365103 Psed_3266 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004333309.1 3485592 R 675635 CDS YP_004333310.1 331697071 10365104 complement(3488083..3488499) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rer:RER_49610 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3488499 10365104 Psed_3267 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333310.1 3488083 R 675635 CDS YP_004333311.1 331697072 10365105 complement(3488496..3488948) 1 NC_015312.1 KEGG: nfa:nfa43930 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 3488948 10365105 Psed_3268 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004333311.1 3488496 R 675635 CDS YP_004333312.1 331697073 10365106 complement(3489013..3489267) 1 NC_015312.1 KEGG: amd:AMED_5874 hypothetical protein; hypothetical protein 3489267 10365106 Psed_3269 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333312.1 3489013 R 675635 CDS YP_004333313.1 331697074 10365107 complement(3489347..3489832) 1 NC_015312.1 KEGG: mjl:Mjls_2787 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin 3489832 10365107 Psed_3270 Pseudonocardia dioxanivorans CB1190 bacterioferritin YP_004333313.1 3489347 R 675635 CDS YP_004333314.1 331697075 10365108 complement(3489952..3490149) 1 NC_015312.1 PFAM: BFD-like [2Fe-2S]-binding domain; KEGG: sna:Snas_5033 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein; BFD (2Fe-2S)-binding domain-containing protein 3490149 10365108 Psed_3271 Pseudonocardia dioxanivorans CB1190 BFD (2Fe-2S)-binding domain-containing protein YP_004333314.1 3489952 R 675635 CDS YP_004333315.1 331697076 10365109 3490183..3492168 1 NC_015312.1 KEGG: amd:AMED_3255 ATP-dependent DNA ligase; TIGRFAM: DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain; PFAM: DNA primase, small subunit; DNA ligase, ATP-dependent, central; DNA polymerase LigD, polymerase domain-containing protein 3492168 10365109 Psed_3272 Pseudonocardia dioxanivorans CB1190 DNA polymerase LigD, polymerase domain-containing protein YP_004333315.1 3490183 D 675635 CDS YP_004333316.1 331697077 10365110 3492195..3493004 1 NC_015312.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: ami:Amir_3412 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3493004 10365110 Psed_3273 Pseudonocardia dioxanivorans CB1190 glycerophosphoryl diester phosphodiesterase YP_004333316.1 3492195 D 675635 CDS YP_004333317.1 331697078 10365111 3493045..3494385 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nml:Namu_0574 major facilitator superfamily protein; major facilitator superfamily protein 3494385 10365111 Psed_3274 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333317.1 3493045 D 675635 CDS YP_004333318.1 331697079 10365112 3494655..3494996 1 NC_015312.1 KEGG: sen:SACE_2290 hypothetical protein; hypothetical protein 3494996 10365112 Psed_3275 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333318.1 3494655 D 675635 CDS YP_004333319.1 331697080 10365113 complement(3495097..3495855) 1 NC_015312.1 KEGG: svi:Svir_21780 glycosyl transferase; PFAM: Glycosyl transferase, family 2; dolichyl-phosphate beta-D-mannosyltransferase 3495855 10365113 Psed_3276 Pseudonocardia dioxanivorans CB1190 dolichyl-phosphate beta-D-mannosyltransferase YP_004333319.1 3495097 R 675635 CDS YP_004333320.1 331697081 10365114 complement(3495848..3497497) 1 NC_015312.1 TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: nfa:nfa31180 polyprenol phosphate mannosyl transferase 2; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 3497497 10365114 Psed_3277 Pseudonocardia dioxanivorans CB1190 apolipoprotein N-acyltransferase YP_004333320.1 3495848 R 675635 CDS YP_004333321.1 331697082 10365115 complement(3497539..3498345) 1 NC_015312.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: req:REQ_37880 gpi deacetylase; LmbE family protein 3498345 10365115 Psed_3278 Pseudonocardia dioxanivorans CB1190 LmbE family protein YP_004333321.1 3497539 R 675635 CDS YP_004333322.1 331697083 10365116 complement(3498546..3500057) 1 NC_015312.1 PFAM: Amidohydrolase 3; KEGG: svi:Svir_21800 predicted TIM-barrel fold metal-dependent hydrolase; amidohydrolase 3500057 10365116 Psed_3279 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004333322.1 3498546 R 675635 CDS YP_004333323.1 331697084 10365117 complement(3500223..3500414) 1 NC_015312.1 PFAM: Phage shock domain; KEGG: ami:Amir_3401 phage shock protein C, PspC; PspC domain-containing protein 3500414 10365117 Psed_3280 Pseudonocardia dioxanivorans CB1190 PspC domain-containing protein YP_004333323.1 3500223 R 675635 CDS YP_004333324.1 331697085 10365118 3500475..3501695 1 NC_015312.1 KEGG: ami:Amir_2701 hypothetical protein; hypothetical protein 3501695 10365118 Psed_3281 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333324.1 3500475 D 675635 CDS YP_004333325.1 331697086 10365119 complement(3501731..3502861) 1 NC_015312.1 PFAM: Peptidase M24, structural domain; Creatinase; KEGG: amd:AMED_4873 X-Pro dipeptidase; peptidase M24 3502861 10365119 Psed_3282 Pseudonocardia dioxanivorans CB1190 peptidase M24 YP_004333325.1 3501731 R 675635 CDS YP_004333326.1 331697087 10365120 3503099..3504037 1 NC_015312.1 KEGG: ami:Amir_2257 5'-3' exonuclease; PFAM: 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 5'-3' exonuclease 3504037 10365120 Psed_3283 Pseudonocardia dioxanivorans CB1190 5'-3' exonuclease YP_004333326.1 3503099 D 675635 CDS YP_004333327.1 331697088 10365121 complement(3504373..3506424) 1 NC_015312.1 KEGG: clu:CLUG_01018 hypothetical protein; hypothetical protein 3506424 10365121 Psed_3284 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333327.1 3504373 R 675635 CDS YP_004333328.1 331697089 10365122 complement(3506619..3509393) 1 NC_015312.1 KEGG: sen:SACE_2265 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DSH, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 3509393 10365122 Psed_3285 Pseudonocardia dioxanivorans CB1190 DEAD/DEAH box helicase domain-containing protein YP_004333328.1 3506619 R 675635 CDS YP_004333329.1 331697090 10365123 complement(3509485..3510465) 1 NC_015312.1 KEGG: req:REQ_23350 twin-arginine translocation protein TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 3510465 10365123 Psed_3286 Pseudonocardia dioxanivorans CB1190 Sec-independent protein translocase subunit TatC YP_004333329.1 3509485 R 675635 CDS YP_004333330.1 331697091 10365124 complement(3510475..3510756) 1 NC_015312.1 TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: sen:SACE_2262 hypothetical protein; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; Sec-independent protein translocase tatA/E-like protein 3510756 10365124 Psed_3287 Pseudonocardia dioxanivorans CB1190 Sec-independent protein translocase tatA/E-like protein YP_004333330.1 3510475 R 675635 CDS YP_004333331.1 331697092 10365125 complement(3510837..3511037) 1 NC_015312.1 hypothetical protein 3511037 10365125 Psed_3288 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333331.1 3510837 R 675635 CDS YP_004333332.1 331697093 10365126 complement(3511037..3512005) 1 NC_015312.1 KEGG: ami:Amir_2250 transcriptional regulator protein; transcriptional regulator protein 3512005 10365126 Psed_3289 Pseudonocardia dioxanivorans CB1190 transcriptional regulator protein YP_004333332.1 3511037 R 675635 CDS YP_004333333.1 331697094 10365127 complement(3512019..3513059) 1 NC_015312.1 KEGG: ami:Amir_2249 transcriptional regulator protein; transcriptional regulator protein 3513059 10365127 Psed_3290 Pseudonocardia dioxanivorans CB1190 transcriptional regulator protein YP_004333333.1 3512019 R 675635 CDS YP_004333334.1 331697095 10365128 3513242..3513487 1 NC_015312.1 KEGG: amd:AMED_4323 hypothetical protein; hypothetical protein 3513487 10365128 Psed_3291 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333334.1 3513242 D 675635 CDS YP_004333335.1 331697096 10365129 complement(3513513..3513878) 1 NC_015312.1 PFAM: Protein of unknown function DUF1304; KEGG: ami:Amir_1705 protein of unknown function DUF1304; hypothetical protein 3513878 10365129 Psed_3292 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333335.1 3513513 R 675635 CDS YP_004333336.1 331697097 10365130 complement(3513990..3515351) 1 NC_015312.1 KEGG: ami:Amir_2247 protein of unknown function DUF245 domain protein; TIGRFAM: Pup ligase; PFAM: Pup ligase/deamidase; proteasome accessory factor PafA 3515351 10365130 Psed_3293 Pseudonocardia dioxanivorans CB1190 proteasome accessory factor PafA YP_004333336.1 3513990 R 675635 CDS YP_004333337.1 331697098 10365131 3515394..3516974 1 NC_015312.1 KEGG: sen:SACE_2253 glycerophosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; Diacylglycerol kinase, catalytic domain; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; Diacylglycerol kinase, catalytic domain; phosphoesterase PA-phosphatase-like protein 3516974 10365131 Psed_3294 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004333337.1 3515394 D 675635 CDS YP_004333338.1 331697099 10365132 complement(3516986..3518110) 1 NC_015312.1 KEGG: bcv:Bcav_2092 hypothetical protein; hypothetical protein 3518110 10365132 Psed_3295 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333338.1 3516986 R 675635 CDS YP_004333339.1 331697100 10365133 complement(3518184..3519134) 1 NC_015312.1 KEGG: nda:Ndas_4113 molybdopterin oxidoreductase Fe4s4 region; PFAM: Molybdopterin oxidoreductase, Fe4S4 domain; Ferredoxin; 4Fe-4S binding domain; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; molybdopterin oxidoreductase Fe4S4 region 3519134 10365133 Psed_3296 Pseudonocardia dioxanivorans CB1190 molybdopterin oxidoreductase Fe4S4 region YP_004333339.1 3518184 R 675635 CDS YP_004333340.1 331697101 10365134 complement(3519131..3521011) 1 NC_015312.1 KEGG: scb:SCAB_16891 respiratory chain oxidoreductase; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; respiratory-chain NADH dehydrogenase domain 51 kDa subunit 3521011 10365134 Psed_3297 Pseudonocardia dioxanivorans CB1190 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_004333340.1 3519131 R 675635 CDS YP_004333341.1 331697102 10365135 complement(3521024..3522955) 1 NC_015312.1 manually curated; KEGG: sma:SAV_1834 formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit); PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; nitrate reductase 3522955 10365135 Psed_3298 Pseudonocardia dioxanivorans CB1190 nitrate reductase YP_004333341.1 3521024 R 675635 CDS YP_004333342.1 331697103 10365136 complement(3523012..3523908) 1 NC_015312.1 KEGG: fri:FraEuI1c_5975 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; molybdopterin-guanine dinucleotide biosynthesis protein A-like protein 3523908 10365136 Psed_3299 Pseudonocardia dioxanivorans CB1190 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein YP_004333342.1 3523012 R 675635 CDS YP_004333343.1 331697104 10365137 3524149..3524976 1 NC_015312.1 TIGRFAM: Formate dehydrogenase, subunit FdhD; HAMAP: Formate dehydrogenase, subunit FdhD; KEGG: amd:AMED_6733 FdhD protein; PFAM: Formate dehydrogenase, subunit FdhD; protein fdhD 3524976 10365137 Psed_3300 Pseudonocardia dioxanivorans CB1190 protein fdhD YP_004333343.1 3524149 D 675635 CDS YP_004333344.1 331697105 10365138 3524973..3525344 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sro:Sros_0848 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3525344 10365138 Psed_3301 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333344.1 3524973 D 675635 CDS YP_004333345.1 331697106 10365139 complement(3525493..3525861) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sen:SACE_0780 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3525861 10365139 Psed_3302 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333345.1 3525493 R 675635 CDS YP_004333346.1 331697107 10365140 complement(3525912..3526715) 1 NC_015312.1 KEGG: req:REQ_23290 20S proteasome alpha subunit prca; TIGRFAM: Proteasome, alpha subunit; PFAM: Proteasome, subunit alpha/beta; proteasome subunit alpha 3526715 10365140 Psed_3303 Pseudonocardia dioxanivorans CB1190 proteasome subunit alpha YP_004333346.1 3525912 R 675635 CDS YP_004333347.1 331697108 10365141 complement(3526810..3527673) 1 NC_015312.1 KEGG: ami:Amir_2241 20S proteasome A and B subunits; TIGRFAM: Peptidase T1A, proteasome beta-subunit, actinobacteria; PFAM: Proteasome, subunit alpha/beta; proteasome subunit beta 3527673 10365141 Psed_3304 Pseudonocardia dioxanivorans CB1190 proteasome subunit beta YP_004333347.1 3526810 R 675635 CDS YP_004333348.1 331697109 10365142 complement(3527873..3528070) 1 NC_015312.1 TIGRFAM: Ubiquitin-like, Pup; HAMAP: Ubiquitin-like, Pup; KEGG: mmi:MMAR_3086 hypothetical protein; PFAM: Ubiquitin-like, Pup; ubiquitin-like protein pup 3528070 10365142 Psed_3305 Pseudonocardia dioxanivorans CB1190 ubiquitin-like protein pup YP_004333348.1 3527873 R 675635 CDS YP_004333349.1 331697110 10365143 complement(3528245..3529744) 1 NC_015312.1 KEGG: ami:Amir_2239 protein of unknown function DUF245 domain protein; TIGRFAM: Pup deamidase; PFAM: Pup ligase/deamidase; proteasome accessory factor PafA2 3529744 10365143 Psed_3306 Pseudonocardia dioxanivorans CB1190 proteasome accessory factor PafA2 YP_004333349.1 3528245 R 675635 CDS YP_004333350.1 331697111 10365144 3529870..3530436 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: req:REQ_23220 NUDIX superfamily hydrolase; NUDIX hydrolase 3530436 10365144 Psed_3307 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004333350.1 3529870 D 675635 CDS YP_004333351.1 331697112 10365145 complement(3530426..3531835) 1 NC_015312.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: kfl:Kfla_3571 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 3531835 10365145 Psed_3308 Pseudonocardia dioxanivorans CB1190 dihydrolipoamide dehydrogenase YP_004333351.1 3530426 R 675635 CDS YP_004333352.1 331697113 10365146 complement(3531926..3532471) 1 NC_015312.1 KEGG: kra:Krad_2941 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3532471 10365146 Psed_3309 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004333352.1 3531926 R 675635 CDS YP_004333353.1 331697114 10365147 3532561..3533121 1 NC_015312.1 KEGG: gob:Gobs_1264 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein 3533121 10365147 Psed_3310 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333353.1 3532561 D 675635 CDS YP_004333354.1 331697115 10365148 complement(3533284..3534144) 1 NC_015312.1 KEGG: mbt:JTY_1080 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 3534144 10365148 Psed_3311 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004333354.1 3533284 R 675635 CDS YP_004333355.1 331697116 10365149 complement(3534230..3534643) 1 NC_015312.1 KEGG: mab:MAB_0479 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3534643 10365149 Psed_3312 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004333355.1 3534230 R 675635 CDS YP_004333356.1 331697117 10365150 3535017..3536081 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 3536081 10365150 Psed_3313 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004333356.1 3535017 D 675635 CDS YP_004333357.1 331697118 10365151 3536096..3536809 1 NC_015312.1 SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: msm:MSMEG_5911 AraC family protein transcriptional regulator; AraC family transcriptional regulator 3536809 10365151 Psed_3314 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004333357.1 3536096 D 675635 CDS YP_004333358.1 331697119 10365152 complement(3536894..3537304) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL5706 quinone binding protein; glyoxalase/bleomycin resistance protein/dioxygenase 3537304 10365152 Psed_3315 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333358.1 3536894 R 675635 CDS YP_004333359.1 331697120 10365153 3537375..3540170 1 NC_015312.1 KEGG: fri:FraEuI1c_4888 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; ATPase, AAA+ type, core; LuxR family transcriptional regulator 3540170 10365153 Psed_3316 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004333359.1 3537375 D 675635 CDS YP_004333360.1 331697121 10365154 3540273..3540758 1 NC_015312.1 KEGG: nml:Namu_0325 hypothetical protein; hypothetical protein 3540758 10365154 Psed_3317 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333360.1 3540273 D 675635 CDS YP_004333361.1 331697122 10365155 3540755..3541285 1 NC_015312.1 KEGG: sro:Sros_0172 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein 3541285 10365155 Psed_3318 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333361.1 3540755 D 675635 CDS YP_004333362.1 331697123 10365156 complement(3541368..3543182) 1 NC_015312.1 TIGRFAM: Proteasome ATPase; PFAM: ATPase, AAA-type, core; KEGG: svi:Svir_22080 ATP-dependent 26S proteasome regulatory subunit; SMART: ATPase, AAA+ type, core; proteasome ATPase 3543182 10365156 Psed_3319 Pseudonocardia dioxanivorans CB1190 proteasome ATPase YP_004333362.1 3541368 R 675635 CDS YP_004333363.1 331697124 10365157 complement(3543345..3544277) 1 NC_015312.1 KEGG: svi:Svir_22120 tRNA (adenine-58-N(1)-) methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit; tRNA (adenine-N(1)-)-methyltransferase 3544277 10365157 Psed_3320 Pseudonocardia dioxanivorans CB1190 tRNA (adenine-N(1)-)-methyltransferase YP_004333363.1 3543345 R 675635 CDS YP_004333364.1 331697125 10365158 3544412..3545527 1 NC_015312.1 KEGG: sen:SACE_2242 RecB family exonuclease; RecB family exonuclease 3545527 10365158 Psed_3321 Pseudonocardia dioxanivorans CB1190 RecB family exonuclease YP_004333364.1 3544412 D 675635 CDS YP_004333365.1 331697126 10365159 3545760..3546584 1 NC_015312.1 KEGG: amd:AMED_4912 hypothetical protein; hypothetical protein 3546584 10365159 Psed_3322 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333365.1 3545760 D 675635 CDS YP_004333366.1 331697127 10365160 complement(3546609..3547493) 1 NC_015312.1 PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: mav:MAV_2393 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 3547493 10365160 Psed_3323 Pseudonocardia dioxanivorans CB1190 ATP phosphoribosyltransferase YP_004333366.1 3546609 R 675635 CDS YP_004333367.1 331697128 10365161 complement(3547544..3547807) 1 NC_015312.1 KEGG: nml:Namu_2980 phosphoribosyl-ATP diphosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase 3547807 10365161 Psed_3324 Pseudonocardia dioxanivorans CB1190 phosphoribosyl-ATP diphosphatase YP_004333367.1 3547544 R 675635 CDS YP_004333368.1 331697129 10365162 complement(3547957..3548658) 1 NC_015312.1 KEGG: ami:Amir_2212 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 3548658 10365162 Psed_3325 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004333368.1 3547957 R 675635 CDS YP_004333369.1 331697130 10365163 complement(3548648..3552220) 1 NC_015312.1 TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: ami:Amir_2211 methionine synthase; PFAM: Homocysteine S-methyltransferase; Pterin-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12-dependent methionine synthase, activation domain; methionine synthase 3552220 10365163 Psed_3326 Pseudonocardia dioxanivorans CB1190 methionine synthase YP_004333369.1 3548648 R 675635 CDS YP_004333370.1 331697131 10365164 3552288..3553184 1 NC_015312.1 KEGG: ami:Amir_2210 protein of unknown function DUF75; hypothetical protein 3553184 10365164 Psed_3327 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333370.1 3552288 D 675635 CDS YP_004333371.1 331697132 10365165 3553319..3554422 1 NC_015312.1 KEGG: rer:RER_31910 MFS transporter; manually curated; PFAM: Major facilitator superfamily MFS-1; major facilitator superfamily protein 3554422 10365165 Psed_3328 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333371.1 3553319 D 675635 CDS YP_004333372.1 331697133 10365166 complement(3554429..3554788) 1 NC_015312.1 PFAM: Protein of unknown function DUF2237; KEGG: mep:MPQ_0170 hypothetical protein; hypothetical protein 3554788 10365166 Psed_3329 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333372.1 3554429 R 675635 CDS YP_004333373.1 331697134 10365167 complement(3554798..3556036) 1 NC_015312.1 TIGRFAM: Mycothiol biosynthesis protein, MshC; KEGG: amd:AMED_4930 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 3556036 10365167 Psed_3330 Pseudonocardia dioxanivorans CB1190 cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase YP_004333373.1 3554798 R 675635 CDS YP_004333374.1 331697135 10365168 complement(3556111..3556314) 1 NC_015312.1 hypothetical protein 3556314 10365168 Psed_3331 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333374.1 3556111 R 675635 CDS YP_004333375.1 331697136 10365169 complement(3556311..3557525) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sna:Snas_1047 major facilitator superfamily MFS_1; major facilitator superfamily protein 3557525 10365169 Psed_3332 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333375.1 3556311 R 675635 CDS YP_004333376.1 331697137 10365170 3557722..3559758 1 NC_015312.1 KEGG: tbi:Tbis_0296 NLP/P60 protein; hypothetical protein 3559758 10365170 Psed_3333 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333376.1 3557722 D 675635 CDS YP_004333377.1 331697138 10365171 complement(3559852..3561837) 1 NC_015312.1 KEGG: nml:Namu_0550 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 3561837 10365171 Psed_3334 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004333377.1 3559852 R 675635 CDS YP_004333378.1 331697139 10365172 complement(3561830..3563230) 1 NC_015312.1 KEGG: nml:Namu_0551 Mg-chelatase subunit ChlI-like protein; Mg-chelatase subunit ChlI-like protein 3563230 10365172 Psed_3335 Pseudonocardia dioxanivorans CB1190 Mg-chelatase subunit ChlI-like protein YP_004333378.1 3561830 R 675635 CDS YP_004333379.1 331697140 10365173 3563383..3563922 1 NC_015312.1 PFAM: Protein of unknown function DUF664; KEGG: nfa:nfa32260 hypothetical protein; hypothetical protein 3563922 10365173 Psed_3336 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333379.1 3563383 D 675635 CDS YP_004333380.1 331697141 10365174 complement(3564079..3564984) 1 NC_015312.1 PFAM: Peptidase M48; KEGG: gob:Gobs_3608 peptidase M48 Ste24p; peptidase M48 Ste24p 3564984 10365174 Psed_3337 Pseudonocardia dioxanivorans CB1190 peptidase M48 Ste24p YP_004333380.1 3564079 R 675635 CDS YP_004333381.1 331697142 10365175 complement(3565019..3565360) 1 NC_015312.1 KEGG: sna:Snas_4544 transcriptional repressor, CopY family; manually curated; PFAM: Penicillinase repressor; CopY family transcriptional regulator 3565360 10365175 Psed_3338 Pseudonocardia dioxanivorans CB1190 CopY family transcriptional regulator YP_004333381.1 3565019 R 675635 CDS YP_004333382.1 331697143 10365176 complement(3565478..3566284) 1 NC_015312.1 PFAM: YkuD domain; KEGG: amd:AMED_4234 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 3566284 10365176 Psed_3339 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004333382.1 3565478 R 675635 CDS YP_004333383.1 331697144 10365177 3566536..3568041 1 NC_015312.1 KEGG: gob:Gobs_1801 EmrB/QacA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 3568041 10365177 Psed_3340 Pseudonocardia dioxanivorans CB1190 EmrB/QacA subfamily drug resistance transporter YP_004333383.1 3566536 D 675635 CDS YP_004333384.1 331697145 10365178 complement(3568052..3568885) 1 NC_015312.1 TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: rha:RHA1_ro02439 hypothetical protein; F420-dependent oxidoreductase 3568885 10365178 Psed_3341 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004333384.1 3568052 R 675635 CDS YP_004333385.1 331697146 10365179 3568995..3570524 1 NC_015312.1 PFAM: Amine oxidase; KEGG: mil:ML5_2707 amine oxidase; amine oxidase 3570524 10365179 Psed_3342 Pseudonocardia dioxanivorans CB1190 amine oxidase YP_004333385.1 3568995 D 675635 CDS YP_004333386.1 331697147 10365180 3570744..3572252 1 NC_015312.1 KEGG: tbi:Tbis_2237 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase, family A, palm domain; SMART: DNA-directed DNA polymerase, family A, palm domain; DNA-directed DNA polymerase 3572252 10365180 Psed_3343 Pseudonocardia dioxanivorans CB1190 DNA-directed DNA polymerase YP_004333386.1 3570744 D 675635 CDS YP_004333387.1 331697148 10365181 complement(3572287..3573204) 1 NC_015312.1 PFAM: Lipase, GDSL; KEGG: mau:Micau_2607 hypothetical protein; G-D-S-L family lipolytic protein 3573204 10365181 Psed_3344 Pseudonocardia dioxanivorans CB1190 G-D-S-L family lipolytic protein YP_004333387.1 3572287 R 675635 CDS YP_004333388.1 331697149 10365182 complement(3573316..3574515) 1 NC_015312.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; HAMAP: S-adenosylmethionine decarboxylase proenzyme; KEGG: nfa:nfa37860 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; Spermine synthase; S-adenosylmethionine decarboxylase 3574515 10365182 Psed_3345 Pseudonocardia dioxanivorans CB1190 S-adenosylmethionine decarboxylase YP_004333388.1 3573316 R 675635 CDS YP_004333389.1 331697150 10365183 complement(3574685..3575809) 1 NC_015312.1 KEGG: ami:Amir_5654 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; Ornithine decarboxylase 3575809 10365183 Psed_3346 Pseudonocardia dioxanivorans CB1190 Ornithine decarboxylase YP_004333389.1 3574685 R 675635 CDS YP_004333390.1 331697151 10365184 3575860..3576333 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: fri:FraEuI1c_2912 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 3576333 10365184 Psed_3347 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004333390.1 3575860 D 675635 CDS YP_004333391.1 331697152 10365185 complement(3576346..3577395) 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: pla:Plav_0925 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 3577395 10365185 Psed_3348 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004333391.1 3576346 R 675635 CDS YP_004333392.1 331697153 10365186 complement(3577392..3578579) 1 NC_015312.1 PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: msp:Mspyr1_45870 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 3578579 10365186 Psed_3349 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004333392.1 3577392 R 675635 CDS YP_004333393.1 331697154 10365187 3578685..3580154 1 NC_015312.1 KEGG: svi:Svir_30180 succinate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase 3580154 10365187 Psed_3350 Pseudonocardia dioxanivorans CB1190 succinate-semialdehyde dehydrogenase YP_004333393.1 3578685 D 675635 CDS YP_004333394.1 331697155 10365188 3580304..3581023 1 NC_015312.1 PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: sen:SACE_3840 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 3581023 10365188 Psed_3351 Pseudonocardia dioxanivorans CB1190 cobalamin (vitamin B12) biosynthesis protein CbiM YP_004333394.1 3580304 D 675635 CDS YP_004333395.1 331697156 10365189 3581020..3581382 1 NC_015312.1 KEGG: msm:MSMEG_2608 cobalt transport protein CbiM; cobalt transport protein CbiM 3581382 10365189 Psed_3352 Pseudonocardia dioxanivorans CB1190 cobalt transport protein CbiM YP_004333395.1 3581020 D 675635 CDS YP_004333396.1 331697157 10365190 3581382..3582146 1 NC_015312.1 KEGG: sen:SACE_3838 cobalt ABC transporter permease; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 3582146 10365190 Psed_3353 Pseudonocardia dioxanivorans CB1190 cobalt ABC transporter inner membrane subunit CbiQ YP_004333396.1 3581382 D 675635 CDS YP_004333397.1 331697158 10365191 3582143..3582874 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Cobalt transport protein ATP-binding subunit; KEGG: sen:SACE_3837 cobalt ABC transporter ATP binding protein; PFAM: ABC transporter-like; cobalt ABC transporter ATPase 3582874 10365191 Psed_3354 Pseudonocardia dioxanivorans CB1190 cobalt ABC transporter ATPase YP_004333397.1 3582143 D 675635 CDS YP_004333398.1 331697159 10365192 complement(3582890..3584293) 1 NC_015312.1 KEGG: amd:AMED_4669 band 7 domain-containing protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 3584293 10365192 Psed_3355 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333398.1 3582890 R 675635 CDS YP_004333399.1 331697160 10365193 complement(3584357..3584794) 1 NC_015312.1 PFAM: Nodulation efficiency, NfeD; KEGG: sen:SACE_3782 membrane protein implicated in regulation of membrane protease activity; hypothetical protein 3584794 10365193 Psed_3356 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333399.1 3584357 R 675635 CDS YP_004333400.1 331697161 10365194 complement(3584815..3585681) 1 NC_015312.1 KEGG: sen:SACE_3783 hypothetical protein; hypothetical protein 3585681 10365194 Psed_3357 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333400.1 3584815 R 675635 CDS YP_004333401.1 331697162 10365195 3585813..3586610 1 NC_015312.1 KEGG: svi:Svir_22310 hypothetical protein; hypothetical protein 3586610 10365195 Psed_3358 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333401.1 3585813 D 675635 CDS YP_004333402.1 331697163 10365196 complement(3586614..3588452) 1 NC_015312.1 KEGG: tbi:Tbis_2516 transcriptional regulator CdaR; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR 3588452 10365196 Psed_3359 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004333402.1 3586614 R 675635 CDS YP_004333403.1 331697164 10365197 complement(3588557..3589648) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_1793 alkanal monooxygenase; luciferase-like protein 3589648 10365197 Psed_3360 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004333403.1 3588557 R 675635 CDS YP_004333404.1 331697165 10365198 complement(3589701..3590417) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gbr:Gbro_1699 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 3590417 10365198 Psed_3361 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333404.1 3589701 R 675635 CDS YP_004333405.1 331697166 10365199 complement(3590414..3591214) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: tbi:Tbis_2523 alpha/beta hydrolase fold protein; alpha/beta hydrolase 3591214 10365199 Psed_3362 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004333405.1 3590414 R 675635 CDS YP_004333406.1 331697167 10365200 complement(3591217..3592845) 1 NC_015312.1 KEGG: tbi:Tbis_2515 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 3592845 10365200 Psed_3363 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004333406.1 3591217 R 675635 CDS YP_004333407.1 331697168 10365201 complement(3592880..3593917) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: tbi:Tbis_2521 luciferase-like monooxygenase; luciferase-like protein 3593917 10365201 Psed_3364 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004333407.1 3592880 R 675635 CDS YP_004333408.1 331697169 10365202 complement(3594057..3595157) 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: tbi:Tbis_2519 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3595157 10365202 Psed_3365 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004333408.1 3594057 R 675635 CDS YP_004333409.1 331697170 10365203 complement(3595154..3596443) 1 NC_015312.1 KEGG: tbi:Tbis_2518 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; (R)-benzylsuccinyl-CoA dehydrogenase 3596443 10365203 Psed_3366 Pseudonocardia dioxanivorans CB1190 (R)-benzylsuccinyl-CoA dehydrogenase YP_004333409.1 3595154 R 675635 CDS YP_004333410.1 331697171 10365204 complement(3596544..3597524) 1 NC_015312.1 KEGG: kfl:Kfla_3382 response regulator receiver; response regulator receiver 3597524 10365204 Psed_3367 Pseudonocardia dioxanivorans CB1190 response regulator receiver YP_004333410.1 3596544 R 675635 CDS YP_004333411.1 331697172 10365205 3597805..3599082 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: kfl:Kfla_3384 integrase protein; integrase protein 3599082 10365205 Psed_3368 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004333411.1 3597805 D 675635 CDS YP_004333412.1 331697173 10365206 complement(3599121..3600155) 1 NC_015312.1 PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: ami:Amir_2182 ferrochelatase; ferrochelatase 3600155 10365206 Psed_3369 Pseudonocardia dioxanivorans CB1190 ferrochelatase YP_004333412.1 3599121 R 675635 CDS YP_004333413.1 331697174 10365207 complement(3600163..3600939) 1 NC_015312.1 KEGG: sen:SACE_3786 enoyl-(acyl carrier protein) reductase; enoyl-ACP reductase 3600939 10365207 Psed_3370 Pseudonocardia dioxanivorans CB1190 enoyl-ACP reductase YP_004333413.1 3600163 R 675635 CDS YP_004333414.1 331697175 10365208 complement(3600972..3601670) 1 NC_015312.1 SMART: Polyketide synthase/Fatty acid synthase, KR; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: gob:Gobs_2104 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3601670 10365208 Psed_3371 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333414.1 3600972 R 675635 CDS YP_004333415.1 331697176 10365209 complement(3601726..3602709) 1 NC_015312.1 KEGG: rer:RER_30730 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 3602709 10365209 Psed_3372 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004333415.1 3601726 R 675635 CDS YP_004333416.1 331697177 10365210 complement(3602706..3603683) 1 NC_015312.1 PFAM: Domain of unknown function DUF58; KEGG: ami:Amir_2146 protein of unknown function DUF58; hypothetical protein 3603683 10365210 Psed_3373 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333416.1 3602706 R 675635 CDS YP_004333417.1 331697178 10365211 complement(3603693..3604769) 1 NC_015312.1 PFAM: ATPase, AAA-3; KEGG: amd:AMED_4951 MoxR-like ATPase; ATPase 3604769 10365211 Psed_3374 Pseudonocardia dioxanivorans CB1190 ATPase YP_004333417.1 3603693 R 675635 CDS YP_004333418.1 331697179 10365212 complement(3604813..3606129) 1 NC_015312.1 PFAM: NLP/P60; KEGG: amd:AMED_4954 hypothetical protein; NLP/P60 protein 3606129 10365212 Psed_3375 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004333418.1 3604813 R 675635 CDS YP_004333419.1 331697180 10365213 3606397..3607998 1 NC_015312.1 KEGG: nml:Namu_2294 hypothetical protein; hypothetical protein 3607998 10365213 Psed_3376 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333419.1 3606397 D 675635 CDS YP_004333420.1 331697181 10365214 3608203..3611022 1 NC_015312.1 TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: amd:AMED_4955 aconitate hydratase 1; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; aconitate hydratase 1 3611022 10365214 Psed_3377 Pseudonocardia dioxanivorans CB1190 aconitate hydratase 1 YP_004333420.1 3608203 D 675635 CDS YP_004333421.1 331697182 10365215 complement(3611864..3612973) 1 NC_015312.1 PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: rop:ROP_26550 glycine cleavage system aminomethyltransferase T; glycine cleavage system protein T 3612973 10365215 Psed_3378 Pseudonocardia dioxanivorans CB1190 glycine cleavage system protein T YP_004333421.1 3611864 R 675635 CDS YP_004333422.1 331697183 10365216 complement(3613096..3613572) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: ret:RHE_CH03368 hypothetical protein; cupin 3613572 10365216 Psed_3379 Pseudonocardia dioxanivorans CB1190 cupin YP_004333422.1 3613096 R 675635 CDS YP_004333423.1 331697184 10365217 complement(3613669..3614661) 1 NC_015312.1 KEGG: nfa:nfa48840 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260; methyltransferase 3614661 10365217 Psed_3380 Pseudonocardia dioxanivorans CB1190 methyltransferase YP_004333423.1 3613669 R 675635 CDS YP_004333424.1 331697185 10365218 complement(3614669..3615484) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03442; KEGG: mil:ML5_4985 hypothetical protein; hypothetical protein 3615484 10365218 Psed_3381 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333424.1 3614669 R 675635 CDS YP_004333425.1 331697186 10365219 complement(3615489..3616895) 1 NC_015312.1 KEGG: ami:Amir_2123 protein of unknown function DUF323; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor; hypothetical protein 3616895 10365219 Psed_3382 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333425.1 3615489 R 675635 CDS YP_004333426.1 331697187 10365220 complement(3616892..3618259) 1 NC_015312.1 manually curated; TIGRFAM: Glutamate--cysteine ligase, GsaH-related; KEGG: sen:SACE_3826 glutamate-cysteine ligase; PFAM: Glutamate--cysteine ligase, GCS2; glutamate/cysteine ligase protein 3618259 10365220 Psed_3383 Pseudonocardia dioxanivorans CB1190 glutamate/cysteine ligase protein YP_004333426.1 3616892 R 675635 CDS YP_004333427.1 331697188 10365221 3618380..3618982 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_2120 transcriptional regulator, TetR family; TetR family transcriptional regulator 3618982 10365221 Psed_3384 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333427.1 3618380 D 675635 CDS YP_004333428.1 331697189 10365222 complement(3619156..3620598) 1 NC_015312.1 KEGG: kfl:Kfla_0168 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 3620598 10365222 Psed_3385 Pseudonocardia dioxanivorans CB1190 EmrB/QacA subfamily drug resistance transporter YP_004333428.1 3619156 R 675635 CDS YP_004333429.1 331697190 10365223 complement(3620850..3621686) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: ami:Amir_5132 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 3621686 10365223 Psed_3386 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004333429.1 3620850 R 675635 CDS YP_004333430.1 331697191 10365224 complement(3621842..3622051) 1 NC_015312.1 KEGG: ami:Amir_5133 transcriptional regulator; transcriptional regulator 3622051 10365224 Psed_3387 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004333430.1 3621842 R 675635 CDS YP_004333431.1 331697192 10365225 complement(3622290..3623915) 1 NC_015312.1 KEGG: sen:SACE_2187 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 3623915 10365225 Psed_3388 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004333431.1 3622290 R 675635 CDS YP_004333432.1 331697193 10365226 3624102..3624908 1 NC_015312.1 KEGG: nfa:nfa34890 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; carbonyl reductase 3624908 10365226 Psed_3389 Pseudonocardia dioxanivorans CB1190 carbonyl reductase YP_004333432.1 3624102 D 675635 CDS YP_004333433.1 331697194 10365228 3626240..3626689 1 NC_015312.1 PFAM: UspA; KEGG: amd:AMED_1572 universal stress protein; UspA domain-containing protein 3626689 10365228 Psed_3391 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004333433.1 3626240 D 675635 CDS YP_004333434.1 331697195 10365229 3626697..3627644 1 NC_015312.1 PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: kfl:Kfla_0317 adenylate/guanylate cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; guanylate cyclase 3627644 10365229 Psed_3392 Pseudonocardia dioxanivorans CB1190 guanylate cyclase YP_004333434.1 3626697 D 675635 CDS YP_004333435.1 331697196 10365230 complement(3627710..3628255) 1 NC_015312.1 PFAM: Domain of unknown function DUF59; KEGG: ami:Amir_5148 protein of unknown function DUF59; hypothetical protein 3628255 10365230 Psed_3393 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333435.1 3627710 R 675635 CDS YP_004333436.1 331697197 10365231 complement(3628252..3628710) 1 NC_015312.1 KEGG: ami:Amir_5149 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; NifU family SUF system FeS assembly protein 3628710 10365231 Psed_3394 Pseudonocardia dioxanivorans CB1190 NifU family SUF system FeS assembly protein YP_004333436.1 3628252 R 675635 CDS YP_004333437.1 331697198 10365232 complement(3628710..3630029) 1 NC_015312.1 TIGRFAM: Cysteine desulfurase, SufS; KEGG: svi:Svir_16160 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase 3630029 10365232 Psed_3395 Pseudonocardia dioxanivorans CB1190 SufS subfamily cysteine desulfurase YP_004333437.1 3628710 R 675635 CDS YP_004333438.1 331697199 10365233 complement(3630026..3630802) 1 NC_015312.1 TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: amd:AMED_2832 Fe-S cluster assembly ATP-binding protein; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC 3630802 10365233 Psed_3396 Pseudonocardia dioxanivorans CB1190 FeS assembly ATPase SufC YP_004333438.1 3630026 R 675635 CDS YP_004333439.1 331697200 10365234 complement(3630896..3632089) 1 NC_015312.1 KEGG: sen:SACE_2175 FeS assembly protein; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD 3632089 10365234 Psed_3397 Pseudonocardia dioxanivorans CB1190 FeS assembly protein SufD YP_004333439.1 3630896 R 675635 CDS YP_004333440.1 331697201 10365235 complement(3632086..3633522) 1 NC_015312.1 KEGG: ami:Amir_5154 FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB 3633522 10365235 Psed_3398 Pseudonocardia dioxanivorans CB1190 FeS assembly protein SufB YP_004333440.1 3632086 R 675635 CDS YP_004333441.1 331697202 10365236 complement(3633519..3634358) 1 NC_015312.1 PFAM: HTH transcriptional regulator, ArsR; KEGG: sen:SACE_2173 transcriptional regulator; ArsR family transcriptional regulator 3634358 10365236 Psed_3399 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004333441.1 3633519 R 675635 CDS YP_004333442.1 331697203 10365237 3634455..3636059 1 NC_015312.1 KEGG: rop:ROP_69820 mannosyltransferase MptB; mannosyltransferase 3636059 10365237 Psed_3400 Pseudonocardia dioxanivorans CB1190 mannosyltransferase YP_004333442.1 3634455 D 675635 CDS YP_004333443.1 331697204 10365238 3636088..3637044 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: ami:Amir_5162 ABC transporter related; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 3637044 10365238 Psed_3401 Pseudonocardia dioxanivorans CB1190 Fe(3+)-transporting ATPase YP_004333443.1 3636088 D 675635 CDS YP_004333444.1 331697205 10365239 3637092..3637877 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: ami:Amir_5163 ABC-2 type transporter; ABC transporter 3637877 10365239 Psed_3402 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004333444.1 3637092 D 675635 CDS YP_004333445.1 331697206 10365240 3637937..3638989 1 NC_015312.1 PFAM: Heme A synthase/Protoheme IX farnesyltransferase; KEGG: ami:Amir_5168 cytochrome oxidase assembly; cytochrome oxidase assembly 3638989 10365240 Psed_3403 Pseudonocardia dioxanivorans CB1190 cytochrome oxidase assembly YP_004333445.1 3637937 D 675635 CDS YP_004333446.1 331697207 10365241 3639106..3640077 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sen:SACE_2164 quinone oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 3640077 10365241 Psed_3404 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004333446.1 3639106 D 675635 CDS YP_004333447.1 331697208 10365242 complement(3640146..3641123) 1 NC_015312.1 TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: svi:Svir_15990 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 3641123 10365242 Psed_3405 Pseudonocardia dioxanivorans CB1190 protoheme IX farnesyltransferase YP_004333447.1 3640146 R 675635 CDS YP_004333448.1 331697209 10365243 3641457..3643544 1 NC_015312.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: ami:Amir_5186 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 3643544 10365243 Psed_3406 Pseudonocardia dioxanivorans CB1190 transketolase YP_004333448.1 3641457 D 675635 CDS YP_004333449.1 331697210 10365244 3643582..3644694 1 NC_015312.1 TIGRFAM: Transaldolase 2; HAMAP: Transaldolase; KEGG: amd:AMED_2808 transaldolase; PFAM: Transaldolase; transaldolase 3644694 10365244 Psed_3407 Pseudonocardia dioxanivorans CB1190 transaldolase YP_004333449.1 3643582 D 675635 CDS YP_004333450.1 331697211 10365245 3644702..3646213 1 NC_015312.1 KEGG: sen:SACE_2158 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 3646213 10365245 Psed_3408 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate isomerase YP_004333450.1 3644702 D 675635 CDS YP_004333451.1 331697212 10365246 3646300..3647868 1 NC_015312.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: sen:SACE_2157 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 3647868 10365246 Psed_3409 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate 1-dehydrogenase YP_004333451.1 3646300 D 675635 CDS YP_004333452.1 331697213 10365247 3647897..3648850 1 NC_015312.1 KEGG: ami:Amir_5190 OpcA protein; TIGRFAM: OpcA; PFAM: Glucose-6-phosphate dehydrogenase subunit; OpcA protein 3648850 10365247 Psed_3410 Pseudonocardia dioxanivorans CB1190 OpcA protein YP_004333452.1 3647897 D 675635 CDS YP_004333453.1 331697214 10365248 3648899..3649681 1 NC_015312.1 TIGRFAM: 6-phosphogluconolactonase, DevB-type; KEGG: ami:Amir_5191 6-phosphogluconolactonase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; 6-phosphogluconolactonase 3649681 10365248 Psed_3411 Pseudonocardia dioxanivorans CB1190 6-phosphogluconolactonase YP_004333453.1 3648899 D 675635 CDS YP_004333454.1 331697215 10365249 3649814..3650203 1 NC_015312.1 KEGG: mau:Micau_2900 hypothetical protein; hypothetical protein 3650203 10365249 Psed_3412 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333454.1 3649814 D 675635 CDS YP_004333455.1 331697216 10365250 3650586..3651824 1 NC_015312.1 PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: rha:RHA1_ro02245 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 3651824 10365250 Psed_3413 Pseudonocardia dioxanivorans CB1190 phosphoribosylglycinamide formyltransferase 2 YP_004333455.1 3650586 D 675635 CDS YP_004333456.1 331697217 10365251 complement(3651836..3652630) 1 NC_015312.1 KEGG: amd:AMED_1048 hypothetical protein; hypothetical protein 3652630 10365251 Psed_3414 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333456.1 3651836 R 675635 CDS YP_004333457.1 331697218 10365252 complement(3652705..3653052) 1 NC_015312.1 KEGG: gob:Gobs_2051 electron transport protein; electron transport protein 3653052 10365252 Psed_3415 Pseudonocardia dioxanivorans CB1190 electron transport protein YP_004333457.1 3652705 R 675635 CDS YP_004333458.1 331697219 10365253 complement(3653090..3653323) 1 NC_015312.1 KEGG: rha:RHA1_ro07180 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 3653323 10365253 Psed_3416 Pseudonocardia dioxanivorans CB1190 preprotein translocase subunit SecG YP_004333458.1 3653090 R 675635 CDS YP_004333459.1 331697220 10365254 complement(3653736..3654548) 1 NC_015312.1 TIGRFAM: Triosephosphate isomerase; KEGG: ami:Amir_5197 triosephosphate isomerase; PFAM: Triosephosphate isomerase; triosephosphate isomerase 3654548 10365254 Psed_3417 Pseudonocardia dioxanivorans CB1190 triosephosphate isomerase YP_004333459.1 3653736 R 675635 CDS YP_004333460.1 331697221 10365255 complement(3654604..3655782) 1 NC_015312.1 HAMAP: Phosphoglycerate kinase; KEGG: svi:Svir_15880 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 3655782 10365255 Psed_3418 Pseudonocardia dioxanivorans CB1190 phosphoglycerate kinase YP_004333460.1 3654604 R 675635 CDS YP_004333461.1 331697222 10365256 complement(3655779..3656792) 1 NC_015312.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: sro:Sros_6038 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 3656792 10365256 Psed_3419 Pseudonocardia dioxanivorans CB1190 glyceraldehyde-3-phosphate dehydrogenase YP_004333461.1 3655779 R 675635 CDS YP_004333462.1 331697223 10365257 complement(3656913..3657896) 1 NC_015312.1 TIGRFAM: Sporulation regulator WhiA; HAMAP: Sporulation regulator WhiA; KEGG: svi:Svir_15810 hypothetical protein; PFAM: Sporulation regulator WhiA, C-terminal; Sporulation regulator WhiA, N-terminal; sporulation transcriptional regulator whiA 3657896 10365257 Psed_3420 Pseudonocardia dioxanivorans CB1190 sporulation transcriptional regulator whiA YP_004333462.1 3656913 R 675635 CDS YP_004333463.1 331697224 10365258 complement(3657981..3659093) 1 NC_015312.1 KEGG: sen:SACE_2140 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0052; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; hypothetical protein 3659093 10365258 Psed_3421 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333463.1 3657981 R 675635 CDS YP_004333464.1 331697225 10365259 complement(3659101..3659994) 1 NC_015312.1 HAMAP: ATPase, P-loop-containing; KEGG: amd:AMED_2779 P-loop ATPase; hypothetical protein 3659994 10365259 Psed_3422 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333464.1 3659101 R 675635 CDS YP_004333465.1 331697226 10365260 complement(3659991..3662219) 1 NC_015312.1 SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: sen:SACE_2138 nuclease subunit of the excinuclease ABC complex; HAMAP: Excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; UvrABC system protein C 3662219 10365260 Psed_3423 Pseudonocardia dioxanivorans CB1190 UvrABC system protein C YP_004333465.1 3659991 R 675635 CDS YP_004333466.1 331697227 10365261 3662356..3663063 1 NC_015312.1 KEGG: amd:AMED_8273 hypothetical protein; hypothetical protein 3663063 10365261 Psed_3424 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333466.1 3662356 D 675635 CDS YP_004333467.1 331697228 10365262 complement(3663078..3663800) 1 NC_015312.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nda:Ndas_4869 haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase 3663800 10365262 Psed_3425 Pseudonocardia dioxanivorans CB1190 haloacid dehalogenase YP_004333467.1 3663078 R 675635 CDS YP_004333468.1 331697229 10365263 complement(3664250..3665167) 1 NC_015312.1 PFAM: Protein of unknown function DUF2581; KEGG: amd:AMED_2775 hypothetical protein; hypothetical protein 3665167 10365263 Psed_3426 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333468.1 3664250 R 675635 CDS YP_004333469.1 331697230 10365264 complement(3665164..3665646) 1 NC_015312.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nml:Namu_4150 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 3665646 10365264 Psed_3427 Pseudonocardia dioxanivorans CB1190 6,7-dimethyl-8-ribityllumazine synthase YP_004333469.1 3665164 R 675635 CDS YP_004333470.1 331697231 10365265 complement(3665920..3667233) 1 NC_015312.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; Riboflavin biosynthesis protein RibBA; KEGG: amd:AMED_2773 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3667233 10365265 Psed_3428 Pseudonocardia dioxanivorans CB1190 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004333470.1 3665920 R 675635 CDS YP_004333471.1 331697232 10365266 complement(3667230..3667862) 1 NC_015312.1 TIGRFAM: Lumazine-binding protein; KEGG: sgr:SGR_6090 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 3667862 10365266 Psed_3429 Pseudonocardia dioxanivorans CB1190 riboflavin synthase subunit alpha YP_004333471.1 3667230 R 675635 CDS YP_004333472.1 331697233 10365267 complement(3667863..3669020) 1 NC_015312.1 TIGRFAM: Riboflavin biosynthesis protein RibD; KEGG: svi:Svir_15710 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; riboflavin biosynthesis protein RibD 3669020 10365267 Psed_3430 Pseudonocardia dioxanivorans CB1190 riboflavin biosynthesis protein RibD YP_004333472.1 3667863 R 675635 CDS YP_004333473.1 331697234 10365268 complement(3669088..3669759) 1 NC_015312.1 TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: svi:Svir_15700 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 3669759 10365268 Psed_3431 Pseudonocardia dioxanivorans CB1190 ribulose-phosphate 3-epimerase YP_004333473.1 3669088 R 675635 CDS YP_004333474.1 331697235 10365269 complement(3669893..3671341) 1 NC_015312.1 PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; KEGG: sen:SACE_2114 ribosomal RNA small subunit methyltransferase; Fmu (Sun) domain-containing protein 3671341 10365269 Psed_3432 Pseudonocardia dioxanivorans CB1190 Fmu (Sun) domain-containing protein YP_004333474.1 3669893 R 675635 CDS YP_004333475.1 331697236 10365270 complement(3671376..3672308) 1 NC_015312.1 PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: ami:Amir_5224 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 3672308 10365270 Psed_3433 Pseudonocardia dioxanivorans CB1190 methionyl-tRNA formyltransferase YP_004333475.1 3671376 R 675635 CDS YP_004333476.1 331697237 10365271 complement(3672308..3672856) 1 NC_015312.1 PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: ami:Amir_5225 peptide deformylase; peptide deformylase 3672856 10365271 Psed_3434 Pseudonocardia dioxanivorans CB1190 peptide deformylase YP_004333476.1 3672308 R 675635 CDS YP_004333477.1 331697238 10365272 complement(3672969..3675029) 1 NC_015312.1 KEGG: ami:Amir_5234 primosomal protein N' (replication factor Y) - superfamily II helicase-like protein; primosomal protein N' 3675029 10365272 Psed_3435 Pseudonocardia dioxanivorans CB1190 primosomal protein N' YP_004333477.1 3672969 R 675635 CDS YP_004333478.1 331697239 10365273 3675148..3676425 1 NC_015312.1 KEGG: gob:Gobs_0948 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase; geranylgeranyl reductase 3676425 10365273 Psed_3436 Pseudonocardia dioxanivorans CB1190 geranylgeranyl reductase YP_004333478.1 3675148 D 675635 CDS YP_004333479.1 331697240 10365274 complement(3676453..3676650) 1 NC_015312.1 KEGG: kfl:Kfla_4685 hypothetical protein; hypothetical protein 3676650 10365274 Psed_3437 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333479.1 3676453 R 675635 CDS YP_004333480.1 331697241 10365275 complement(3676797..3677261) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: gob:Gobs_3405 cupin 2 conserved barrel domain-containing protein; cupin 3677261 10365275 Psed_3438 Pseudonocardia dioxanivorans CB1190 cupin YP_004333480.1 3676797 R 675635 CDS YP_004333481.1 331697242 10365276 complement(3677258..3678460) 1 NC_015312.1 PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; KEGG: srt:Srot_2293 S-adenosylmethionine synthetase; S-adenosylmethionine synthase 3678460 10365276 Psed_3439 Pseudonocardia dioxanivorans CB1190 S-adenosylmethionine synthase YP_004333481.1 3677258 R 675635 CDS YP_004333482.1 331697243 10365277 3678716..3679315 1 NC_015312.1 PFAM: SH3, type 3; KEGG: cin:100181706 similar to HrTT-1-like; SH3 type 3 domain-containing protein 3679315 10365277 Psed_3440 Pseudonocardia dioxanivorans CB1190 SH3 type 3 domain-containing protein YP_004333482.1 3678716 D 675635 CDS YP_004333483.1 331697244 10365279 complement(3680116..3681282) 1 NC_015312.1 PFAM: Protein of unknown function DUF939; KEGG: gob:Gobs_2756 hypothetical protein; hypothetical protein 3681282 10365279 Psed_3442 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333483.1 3680116 R 675635 CDS YP_004333484.1 331697245 10365280 3681894..3682499 1 NC_015312.1 KEGG: nca:Noca_4824 hypothetical protein; hypothetical protein 3682499 10365280 Psed_3443 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333484.1 3681894 D 675635 CDS YP_004333485.1 331697246 10365281 complement(3682822..3683043) 1 NC_015312.1 hypothetical protein 3683043 10365281 Psed_3444 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333485.1 3682822 R 675635 CDS YP_004333486.1 331697247 10365282 3683986..3685674 1 NC_015312.1 KEGG: sma:SAV_7236 hypothetical protein; transcriptional regulator CdaR 3685674 10365282 Psed_3445 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004333486.1 3683986 D 675635 CDS YP_004333487.1 331697248 10365283 3685799..3686395 1 NC_015312.1 PFAM: Ferritin/Dps protein; KEGG: sna:Snas_3834 ferritin Dps family protein; ferritin 3686395 10365283 Psed_3446 Pseudonocardia dioxanivorans CB1190 ferritin YP_004333487.1 3685799 D 675635 CDS YP_004333488.1 331697249 10365284 complement(3686974..3687156) 1 NC_015312.1 hypothetical protein 3687156 10365284 Psed_3447 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333488.1 3686974 R 675635 CDS YP_004333489.1 331697250 10365285 3687306..3688298 1 NC_015312.1 KEGG: cce:Ccel_0633 hypothetical protein; hypothetical protein 3688298 10365285 Psed_3448 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333489.1 3687306 D 675635 CDS YP_004333490.1 331697251 10365286 3688291..3689679 1 NC_015312.1 KEGG: sma:SAV_1892 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase (ubiquinone) 3689679 10365286 Psed_3449 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (ubiquinone) YP_004333490.1 3688291 D 675635 CDS YP_004333491.1 331697252 10365287 3689943..3690698 1 NC_015312.1 hypothetical protein 3690698 10365287 Psed_3450 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333491.1 3689943 D 675635 CDS YP_004333492.1 331697253 10365288 complement(3690891..3691343) 1 NC_015312.1 PFAM: Protein of unknown function DUF1931; KEGG: nml:Namu_3580 hypothetical protein; hypothetical protein 3691343 10365288 Psed_3451 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333492.1 3690891 R 675635 CDS YP_004333493.1 331697254 10365290 3692021..3692356 1 NC_015312.1 KEGG: sro:Sros_4025 hypothetical protein; hypothetical protein 3692356 10365290 Psed_3453 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333493.1 3692021 D 675635 CDS YP_004333494.1 331697255 10365292 3693046..3693309 1 NC_015312.1 manually curated; KEGG: fal:FRAAL6446 hypothetical protein; hypothetical protein 3693309 10365292 Psed_3455 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333494.1 3693046 D 675635 CDS YP_004333495.1 331697256 10365293 3693306..3695030 1 NC_015312.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Cyclic nucleotide-binding domain; KEGG: sro:Sros_4028 thioredoxin-disulfide reductase; SMART: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 3695030 10365293 Psed_3456 Pseudonocardia dioxanivorans CB1190 cyclic nucleotide-binding protein YP_004333495.1 3693306 D 675635 CDS YP_004333496.1 331697257 10365294 3695403..3696260 1 NC_015312.1 KEGG: nca:Noca_2345 hypothetical protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related; polyphosphate:nucleotide phosphotransferase 3696260 10365294 Psed_3457 Pseudonocardia dioxanivorans CB1190 polyphosphate:nucleotide phosphotransferase YP_004333496.1 3695403 D 675635 CDS YP_004333497.1 331697258 10365295 complement(3696284..3696781) 1 NC_015312.1 KEGG: sma:SAV_7227 hypothetical protein; hypothetical protein 3696781 10365295 Psed_3458 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333497.1 3696284 R 675635 CDS YP_004333498.1 331697259 10365297 complement(3697822..3699030) 1 NC_015312.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; manually curated; KEGG: kra:Krad_3959 formaldehyde dehydrogenase glutathione-independent; TIGRFAM: Formaldehyde dehydrogenase, glutathione-independent; formaldehyde dehydrogenase 3699030 10365297 Psed_3460 Pseudonocardia dioxanivorans CB1190 formaldehyde dehydrogenase YP_004333498.1 3697822 R 675635 CDS YP_004333499.1 331697260 10365298 3699764..3700441 1 NC_015312.1 KEGG: ava:Ava_C0139 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria; transport-associated protein 3700441 10365298 Psed_3461 Pseudonocardia dioxanivorans CB1190 transport-associated protein YP_004333499.1 3699764 D 675635 CDS YP_004333500.1 331697261 10365299 3700520..3702409 1 NC_015312.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, N-terminal; Transketolase, C-terminal; KEGG: fra:Francci3_1278 transketolase; SMART: Transketolase-like, pyrimidine-binding domain; 1-deoxy-D-xylulose-5-phosphate synthase 3702409 10365299 Psed_3462 Pseudonocardia dioxanivorans CB1190 1-deoxy-D-xylulose-5-phosphate synthase YP_004333500.1 3700520 D 675635 CDS YP_004333501.1 331697262 10365300 complement(3703163..3703768) 1 NC_015312.1 hypothetical protein 3703768 10365300 Psed_3463 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333501.1 3703163 R 675635 CDS YP_004333502.1 331697263 10365301 complement(3703955..3704734) 1 NC_015312.1 KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 3704734 10365301 Psed_3464 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004333502.1 3703955 R 675635 CDS YP_004333503.1 331697264 10365303 3706557..3707552 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: gbr:Gbro_4728 integrase protein; integrase protein 3707552 10365303 Psed_3467 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004333503.1 3706557 D 675635 CDS YP_004333504.1 331697265 10365304 3707647..3709368 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: rer:pREL1_0294 transposase; integrase protein 3709368 10365304 Psed_3468 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004333504.1 3707647 D 675635 CDS YP_004333505.1 331697266 10365306 complement(3712621..3713742) 1 NC_015312.1 PFAM: Mechanosensitive ion channel MscS; KEGG: mil:ML5_4346 mscs mechanosensitive ion channel; mechanosensitive ion channel MscS 3713742 10365306 Psed_3470 Pseudonocardia dioxanivorans CB1190 mechanosensitive ion channel MscS YP_004333505.1 3712621 R 675635 CDS YP_004333506.1 331697267 10365307 3713906..3714082 1 NC_015312.1 hypothetical protein 3714082 10365307 Psed_3471 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333506.1 3713906 D 675635 CDS YP_004333507.1 331697268 10365308 complement(3714253..3714711) 1 NC_015312.1 KEGG: svi:Svir_35080 protein of unknown function (DUF461); hypothetical protein 3714711 10365308 Psed_3472 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333507.1 3714253 R 675635 CDS YP_004333508.1 331697269 10365309 complement(3715500..3717266) 1 NC_015312.1 KEGG: msm:MSMEG_2280 pyruvate dehydrogenase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; pyruvate dehydrogenase 3717266 10365309 Psed_3473 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333508.1 3715500 R 675635 CDS YP_004333509.1 331697270 10365310 complement(3717706..3718125) 1 NC_015312.1 KEGG: nda:Ndas_1248 membrane protein; hypothetical protein 3718125 10365310 Psed_3474 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333509.1 3717706 R 675635 CDS YP_004333510.1 331697271 10365311 complement(3718484..3719101) 1 NC_015312.1 KEGG: fal:FRAAL6366 hypothetical protein; hypothetical protein 3719101 10365311 Psed_3475 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333510.1 3718484 R 675635 CDS YP_004333511.1 331697272 10365312 complement(3719094..3719786) 1 NC_015312.1 PFAM: Dienelactone hydrolase; KEGG: sro:Sros_3321 dienelactone hydrolase; dienelactone hydrolase 3719786 10365312 Psed_3476 Pseudonocardia dioxanivorans CB1190 dienelactone hydrolase YP_004333511.1 3719094 R 675635 CDS YP_004333512.1 331697273 10365313 complement(3719835..3721844) 1 NC_015312.1 PFAM: Erythromycin esterase; Phosphoribosyltransferase; KEGG: mgi:Mflv_4988 erythromycin esterase; erythromycin esterase 3721844 10365313 Psed_3477 Pseudonocardia dioxanivorans CB1190 erythromycin esterase YP_004333512.1 3719835 R 675635 CDS YP_004333513.1 331697274 10365314 3723281..3724171 1 NC_015312.1 KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; SigB/F/G subfamily RNA polymerase sigma-28 subunit 3724171 10365314 Psed_3478 Pseudonocardia dioxanivorans CB1190 SigB/F/G subfamily RNA polymerase sigma-28 subunit YP_004333513.1 3723281 D 675635 CDS YP_004333514.1 331697275 10365316 complement(3724979..3725365) 1 NC_015312.1 KEGG: rha:RHA1_ro06703 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 3725365 10365316 Psed_3480 Pseudonocardia dioxanivorans CB1190 thioredoxin YP_004333514.1 3724979 R 675635 CDS YP_004333515.1 331697276 10365317 complement(3725448..3728075) 1 NC_015312.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sma:SAV_7241 ATP-dependent Clp protease; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 3728075 10365317 Psed_3481 Pseudonocardia dioxanivorans CB1190 ATP-dependent chaperone ClpB YP_004333515.1 3725448 R 675635 CDS YP_004333516.1 331697277 10365318 complement(3728066..3728449) 1 NC_015312.1 KEGG: sro:Sros_4025 hypothetical protein; hypothetical protein 3728449 10365318 Psed_3482 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333516.1 3728066 R 675635 CDS YP_004333517.1 331697278 10365319 complement(3728446..3729441) 1 NC_015312.1 KEGG: fri:FraEuI1c_6448 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 3729441 10365319 Psed_3483 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaJ YP_004333517.1 3728446 R 675635 CDS YP_004333518.1 331697279 10365320 complement(3729445..3730101) 1 NC_015312.1 KEGG: sma:SAV_7238 GrpE homologue; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE 3730101 10365320 Psed_3484 Pseudonocardia dioxanivorans CB1190 protein grpE YP_004333518.1 3729445 R 675635 CDS YP_004333519.1 331697280 10365321 complement(3730110..3731996) 1 NC_015312.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: sma:SAV_7237 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 3731996 10365321 Psed_3485 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaK YP_004333519.1 3730110 R 675635 CDS YP_004333520.1 331697281 10365322 complement(3731998..3732552) 1 NC_015312.1 KEGG: scb:SCAB_84581 hypothetical protein; hypothetical protein 3732552 10365322 Psed_3486 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333520.1 3731998 R 675635 CDS YP_004333521.1 331697282 10365323 complement(3732566..3733039) 1 NC_015312.1 PFAM: Heat shock protein Hsp20; KEGG: sna:Snas_3573 heat shock protein HSP20; heat shock protein Hsp20 3733039 10365323 Psed_3487 Pseudonocardia dioxanivorans CB1190 heat shock protein Hsp20 YP_004333521.1 3732566 R 675635 CDS YP_004333522.1 331697283 10365324 complement(3733635..3734066) 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: gob:Gobs_2116 anti-sigma-factor antagonist; sulfate transporter/antisigma-factor antagonist STAS 3734066 10365324 Psed_3488 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004333522.1 3733635 R 675635 CDS YP_004333523.1 331697284 10365325 complement(3734100..3734528) 1 NC_015312.1 PFAM: Protein of unknown function DUF2267; KEGG: afw:Anae109_3329 hypothetical protein; hypothetical protein 3734528 10365325 Psed_3489 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333523.1 3734100 R 675635 CDS YP_004333524.1 331697285 10365326 3734773..3736680 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: msm:MSMEG_3536 sugar transport protein; major facilitator superfamily protein 3736680 10365326 Psed_3490 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333524.1 3734773 D 675635 CDS YP_004333525.1 331697286 10365328 3737397..3737654 1 NC_015312.1 PFAM: Transcription factor WhiB; KEGG: cdi:DIP0712 transcriptional regulator; transcription factor WhiB 3737654 10365328 Psed_3492 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004333525.1 3737397 D 675635 CDS YP_004333526.1 331697287 10365329 3737752..3738678 1 NC_015312.1 KEGG: bgl:bglu_1g00680 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; ParB domain-containing protein nuclease 3738678 10365329 Psed_3493 Pseudonocardia dioxanivorans CB1190 ParB domain-containing protein nuclease YP_004333526.1 3737752 D 675635 CDS YP_004333527.1 331697288 10365330 complement(3739174..3739413) 1 NC_015312.1 hypothetical protein 3739413 10365330 Psed_3494 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333527.1 3739174 R 675635 CDS YP_004333528.1 331697289 10365331 3739706..3740278 1 NC_015312.1 PFAM: Protein of unknown function DUF308, membrane; KEGG: amd:AMED_1470 hypothetical protein; hypothetical protein 3740278 10365331 Psed_3495 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333528.1 3739706 D 675635 CDS YP_004333529.1 331697290 10365332 complement(3740283..3740642) 1 NC_015312.1 KEGG: fal:FRAAL2608 hypothetical protein; hypothetical protein 3740642 10365332 Psed_3496 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333529.1 3740283 R 675635 CDS YP_004333530.1 331697291 10365333 complement(3740662..3741345) 1 NC_015312.1 KEGG: ava:Ava_C0139 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria; transport-associated protein 3741345 10365333 Psed_3497 Pseudonocardia dioxanivorans CB1190 transport-associated protein YP_004333530.1 3740662 R 675635 CDS YP_004333531.1 331697292 10365336 complement(3742503..3743930) 1 NC_015312.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: cwo:Cwoe_1220 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 3743930 10365336 Psed_3500 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate 1-dehydrogenase YP_004333531.1 3742503 R 675635 CDS YP_004333532.1 331697293 10365337 3744140..3744337 1 NC_015312.1 hypothetical protein 3744337 10365337 Psed_3501 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333532.1 3744140 D 675635 CDS YP_004333533.1 331697294 10365338 complement(3744922..3746064) 1 NC_015312.1 KEGG: aae:aq_199 hypothetical protein; hypothetical protein 3746064 10365338 Psed_3502 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333533.1 3744922 R 675635 CDS YP_004333534.1 331697295 10365339 complement(3746121..3747083) 1 NC_015312.1 manually curated; KEGG: tbi:Tbis_0798 PDZ/DHR/GLGF domain-containing protein; PDZ/DHR/GLGF domain-containing protein 3747083 10365339 Psed_3503 Pseudonocardia dioxanivorans CB1190 PDZ/DHR/GLGF domain-containing protein YP_004333534.1 3746121 R 675635 CDS YP_004333535.1 331697296 10365340 3747819..3748532 1 NC_015312.1 KEGG: sro:Sros_3321 dienelactone hydrolase; dienelactone hydrolase 3748532 10365340 Psed_3504 Pseudonocardia dioxanivorans CB1190 dienelactone hydrolase YP_004333535.1 3747819 D 675635 CDS YP_004333536.1 331697297 10365341 3748602..3748754 1 NC_015312.1 hypothetical protein 3748754 10365341 Psed_3505 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333536.1 3748602 D 675635 CDS YP_004333537.1 331697298 10365344 3750256..3750819 1 NC_015312.1 KEGG: sma:SAV_7231 intracellular protease/amidase; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI; Pfpi family intracellular protease 3750819 10365344 Psed_3508 Pseudonocardia dioxanivorans CB1190 Pfpi family intracellular protease YP_004333537.1 3750256 D 675635 CDS YP_004333538.1 331697299 10365346 3751613..3752068 1 NC_015312.1 KEGG: amd:AMED_8764 transcription elongation factor GreA; transcription elongation factor GreA 3752068 10365346 Psed_3510 Pseudonocardia dioxanivorans CB1190 transcription elongation factor GreA YP_004333538.1 3751613 D 675635 CDS YP_004333539.1 331697300 10365347 3752215..3752487 1 NC_015312.1 KEGG: mkm:Mkms_1137 integrase catalytic subunit; hypothetical protein 3752487 10365347 Psed_3511 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333539.1 3752215 D 675635 CDS YP_004333540.1 331697301 10365348 3752732..3753478 1 NC_015312.1 KEGG: geo:Geob_0340 hypothetical protein; hypothetical protein 3753478 10365348 Psed_3512 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333540.1 3752732 D 675635 CDS YP_004333541.1 331697302 10365349 complement(3754320..3755174) 1 NC_015312.1 SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: rha:RHA1_ro08065 AraC family transcriptional regulator; AraC family transcriptional regulator 3755174 10365349 Psed_3513 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004333541.1 3754320 R 675635 CDS YP_004333542.1 331697303 10365350 3755430..3756509 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: afo:Afer_0361 glycosyl transferase group 1; group 1 glycosyl transferase 3756509 10365350 Psed_3514 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004333542.1 3755430 D 675635 CDS YP_004333543.1 331697304 10365351 3756991..3757215 1 NC_015312.1 KEGG: opr:Ocepr_1698 hypothetical protein; hypothetical protein 3757215 10365351 Psed_3515 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333543.1 3756991 D 675635 CDS YP_004333544.1 331697305 10365354 complement(3758429..3759655) 1 NC_015312.1 TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: ami:Amir_5236 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 3759655 10365354 Psed_3518 Pseudonocardia dioxanivorans CB1190 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_004333544.1 3758429 R 675635 CDS YP_004333545.1 331697306 10365355 complement(3759659..3759937) 1 NC_015312.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: ami:Amir_5237 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase, subunit omega/K/RPABC2; DNA-directed RNA polymerase subunit omega 3759937 10365355 Psed_3519 Pseudonocardia dioxanivorans CB1190 DNA-directed RNA polymerase subunit omega YP_004333545.1 3759659 R 675635 CDS YP_004333546.1 331697307 10365356 complement(3759934..3760596) 1 NC_015312.1 manually curated; KEGG: rer:RER_30080 guanylate kinase; SMART: Guanylate kinase/L-type calcium channel; TIGRFAM: Guanylate kinase, sub-group; PFAM: Guanylate kinase; HAMAP: Guanylate kinase, sub-group; guanylate kinase 3760596 10365356 Psed_3520 Pseudonocardia dioxanivorans CB1190 guanylate kinase YP_004333546.1 3759934 R 675635 CDS YP_004333547.1 331697308 10365357 complement(3760726..3761040) 1 NC_015312.1 KEGG: ami:Amir_5239 hypothetical protein; hypothetical protein 3761040 10365357 Psed_3521 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333547.1 3760726 R 675635 CDS YP_004333548.1 331697309 10365358 complement(3761366..3761722) 1 NC_015312.1 KEGG: fre:Franean1_6493 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 3761722 10365358 Psed_3522 Pseudonocardia dioxanivorans CB1190 response regulator receiver protein YP_004333548.1 3761366 R 675635 CDS YP_004333549.1 331697310 10365359 complement(3761853..3762764) 1 NC_015312.1 SMART: Orotidine 5'-phosphate decarboxylase domain; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; KEGG: ami:Amir_5240 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; orotidine 5'-phosphate decarboxylase 3762764 10365359 Psed_3523 Pseudonocardia dioxanivorans CB1190 orotidine 5'-phosphate decarboxylase YP_004333549.1 3761853 R 675635 CDS YP_004333550.1 331697311 10365360 complement(3762761..3766060) 1 NC_015312.1 SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: sen:SACE_2083 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; carbamoyl-phosphate synthase large subunit 3766060 10365360 Psed_3524 Pseudonocardia dioxanivorans CB1190 carbamoyl-phosphate synthase large subunit YP_004333550.1 3762761 R 675635 CDS YP_004333551.1 331697312 10365361 complement(3766060..3767871) 1 NC_015312.1 TIGRFAM: Carbamoyl-phosphate synthase, small subunit; KEGG: sen:SACE_2082 carbamoyl-phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase small subunit 3767871 10365361 Psed_3525 Pseudonocardia dioxanivorans CB1190 carbamoyl-phosphate synthase small subunit YP_004333551.1 3766060 R 675635 CDS YP_004333552.1 331697313 10365362 complement(3767868..3769169) 1 NC_015312.1 TIGRFAM: Dihydroorotase; KEGG: svi:Svir_15560 dihydroorotase; PFAM: Amidohydrolase 1; dihydroorotase, multifunctional complex type 3769169 10365362 Psed_3526 Pseudonocardia dioxanivorans CB1190 dihydroorotase, multifunctional complex type YP_004333552.1 3767868 R 675635 CDS YP_004333553.1 331697314 10365363 complement(3769181..3770125) 1 NC_015312.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase, eukaryotic; KEGG: sen:SACE_2079 aspartate carbamoyltransferase catalytic chain; aspartate carbamoyltransferase 3770125 10365363 Psed_3527 Pseudonocardia dioxanivorans CB1190 aspartate carbamoyltransferase YP_004333553.1 3769181 R 675635 CDS YP_004333554.1 331697315 10365364 complement(3770122..3770709) 1 NC_015312.1 HAMAP: Bifunctional protein PyrR; KEGG: rha:RHA1_ro07147 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 3770709 10365364 Psed_3528 Pseudonocardia dioxanivorans CB1190 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_004333554.1 3770122 R 675635 CDS YP_004333555.1 331697316 10365365 3771235..3771723 1 NC_015312.1 KEGG: ami:Amir_5247 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 3771723 10365365 Psed_3529 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004333555.1 3771235 D 675635 CDS YP_004333556.1 331697317 10365366 complement(3771995..3773161) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_7047 major facilitator superfamily sugar transporter; major facilitator superfamily protein 3773161 10365366 Psed_3530 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333556.1 3771995 R 675635 CDS YP_004333557.1 331697318 10365367 complement(3773258..3774772) 1 NC_015312.1 KEGG: nml:Namu_4904 ankyrin; ankyrin 3774772 10365367 Psed_3531 Pseudonocardia dioxanivorans CB1190 ankyrin YP_004333557.1 3773258 R 675635 CDS YP_004333558.1 331697319 10365368 complement(3775021..3775440) 1 NC_015312.1 TIGRFAM: NusB antitermination factor; HAMAP: NusB antitermination factor; KEGG: ami:Amir_5248 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 3775440 10365368 Psed_3532 Pseudonocardia dioxanivorans CB1190 NusB antitermination factor YP_004333558.1 3775021 R 675635 CDS YP_004333559.1 331697320 10365369 complement(3775442..3776005) 1 NC_015312.1 SMART: Elongation factor P, C-terminal; TIGRFAM: Translation elongation factor P; KEGG: ami:Amir_5249 translation elongation factor P; HAMAP: Translation elongation factor P; PFAM: Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; Elongation factor P, C-terminal; elongation factor P 3776005 10365369 Psed_3533 Pseudonocardia dioxanivorans CB1190 elongation factor P YP_004333559.1 3775442 R 675635 CDS YP_004333560.1 331697321 10365370 complement(3776206..3777294) 1 NC_015312.1 PFAM: Peptidase M24, structural domain; Creatinase; KEGG: ami:Amir_5250 peptidase M24; peptidase M24 3777294 10365370 Psed_3534 Pseudonocardia dioxanivorans CB1190 peptidase M24 YP_004333560.1 3776206 R 675635 CDS YP_004333561.1 331697322 10365371 complement(3777299..3778402) 1 NC_015312.1 PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase AroB, subgroup; KEGG: ami:Amir_5253 3-dehydroquinate synthase; 3-dehydroquinate synthase 3778402 10365371 Psed_3535 Pseudonocardia dioxanivorans CB1190 3-dehydroquinate synthase YP_004333561.1 3777299 R 675635 CDS YP_004333562.1 331697323 10365372 complement(3778704..3779324) 1 NC_015312.1 HAMAP: Shikimate kinase; KEGG: amd:AMED_2734 shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 3779324 10365372 Psed_3536 Pseudonocardia dioxanivorans CB1190 shikimate kinase YP_004333562.1 3778704 R 675635 CDS YP_004333563.1 331697324 10365373 complement(3779321..3780508) 1 NC_015312.1 TIGRFAM: Chorismate synthase; KEGG: mav:MAV_3417 chorismate synthase; PFAM: Chorismate synthase; chorismate synthase 3780508 10365373 Psed_3537 Pseudonocardia dioxanivorans CB1190 chorismate synthase YP_004333563.1 3779321 R 675635 CDS YP_004333564.1 331697325 10365374 complement(3780561..3781424) 1 NC_015312.1 PFAM: Peptidase A24A, prepilin type IV; KEGG: sro:Sros_6538 prepilin peptidase; peptidase A24A prepilin type IV 3781424 10365374 Psed_3538 Pseudonocardia dioxanivorans CB1190 peptidase A24A prepilin type IV YP_004333564.1 3780561 R 675635 CDS YP_004333565.1 331697326 10365375 3781811..3782236 1 NC_015312.1 KEGG: sma:SAV_1780 hypothetical protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 3782236 10365375 Psed_3539 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004333565.1 3781811 D 675635 CDS YP_004333566.1 331697327 10365376 complement(3782285..3783121) 1 NC_015312.1 KEGG: sco:SCO2803 hypothetical protein; hypothetical protein 3783121 10365376 Psed_3540 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333566.1 3782285 R 675635 CDS YP_004333567.1 331697328 10365377 complement(3783165..3785417) 1 NC_015312.1 KEGG: amd:AMED_2715 aminodeoxychorismate lyase-like protein; TIGRFAM: Uncharacterised protein family UPF0755; PFAM: Uncharacterised protein family UPF0755; aminodeoxychorismate lyase 3785417 10365377 Psed_3541 Pseudonocardia dioxanivorans CB1190 aminodeoxychorismate lyase YP_004333567.1 3783165 R 675635 CDS YP_004333568.1 331697329 10365378 complement(3785520..3785969) 1 NC_015312.1 SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: ami:Amir_5264 Holliday junction resolvase YqgF; HAMAP: Resolvase, holliday junction-type, YqgF-like; PFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase 3785969 10365378 Psed_3542 Pseudonocardia dioxanivorans CB1190 Holliday junction resolvase YP_004333568.1 3785520 R 675635 CDS YP_004333569.1 331697330 10365379 complement(3785966..3788629) 1 NC_015312.1 TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; KEGG: sen:SACE_2052 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD; alanyl-tRNA synthetase 3788629 10365379 Psed_3543 Pseudonocardia dioxanivorans CB1190 alanyl-tRNA synthetase YP_004333569.1 3785966 R 675635 CDS YP_004333570.1 331697331 10365380 complement(3788692..3788997) 1 NC_015312.1 KEGG: amd:AMED_2712 hypothetical protein; hypothetical protein 3788997 10365380 Psed_3544 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333570.1 3788692 R 675635 CDS YP_004333571.1 331697332 10365381 complement(3788994..3789371) 1 NC_015312.1 KEGG: sen:SACE_2050 secreted protein; hypothetical protein 3789371 10365381 Psed_3545 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333571.1 3788994 R 675635 CDS YP_004333572.1 331697333 10365382 complement(3789453..3790544) 1 NC_015312.1 KEGG: svi:Svir_04710 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3790544 10365382 Psed_3546 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004333572.1 3789453 R 675635 CDS YP_004333573.1 331697334 10365383 3790825..3791535 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1469 regulatory protein TetR; TetR family transcriptional regulator 3791535 10365383 Psed_3547 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333573.1 3790825 D 675635 CDS YP_004333574.1 331697335 10365384 complement(3791564..3792799) 1 NC_015312.1 TIGRFAM: Ornithine aminotransferase; KEGG: gob:Gobs_2808 ornithine aminotransferase; PFAM: Aminotransferase class-III; ornithine aminotransferase 3792799 10365384 Psed_3548 Pseudonocardia dioxanivorans CB1190 ornithine aminotransferase YP_004333574.1 3791564 R 675635 CDS YP_004333575.1 331697336 10365385 complement(3792954..3793406) 1 NC_015312.1 KEGG: sco:SCO1458 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 3793406 10365385 Psed_3549 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004333575.1 3792954 R 675635 CDS YP_004333576.1 331697337 10365386 3793435..3794655 1 NC_015312.1 HAMAP: Arginine deiminase; KEGG: scb:SCAB_23151 arginine deiminase; PFAM: Amidinotransferase; arginine deiminase 3794655 10365386 Psed_3550 Pseudonocardia dioxanivorans CB1190 arginine deiminase YP_004333576.1 3793435 D 675635 CDS YP_004333577.1 331697338 10365387 3794732..3795919 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: nml:Namu_2591 hypothetical protein; FAD dependent oxidoreductase 3795919 10365387 Psed_3551 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004333577.1 3794732 D 675635 CDS YP_004333578.1 331697339 10365388 3795926..3796546 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nml:Namu_2592 TetR family transcriptional regulator; TetR family transcriptional regulator 3796546 10365388 Psed_3552 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333578.1 3795926 D 675635 CDS YP_004333579.1 331697340 10365389 complement(3796629..3797513) 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 3797513 10365389 Psed_3553 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004333579.1 3796629 R 675635 CDS YP_004333580.1 331697341 10365390 complement(3797591..3799033) 1 NC_015312.1 PFAM: Amidase; KEGG: pla:Plav_3043 amidase; amidase 3799033 10365390 Psed_3554 Pseudonocardia dioxanivorans CB1190 amidase YP_004333580.1 3797591 R 675635 CDS YP_004333581.1 331697342 10365391 3799452..3801542 1 NC_015312.1 KEGG: rop:ROP_32800 hydantoinase A; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 3801542 10365391 Psed_3555 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004333581.1 3799452 D 675635 CDS YP_004333582.1 331697343 10365392 3801567..3803546 1 NC_015312.1 KEGG: rer:RER_58720 hydantoinase B; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 3803546 10365392 Psed_3556 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004333582.1 3801567 D 675635 CDS YP_004333583.1 331697344 10365393 3803635..3805971 1 NC_015312.1 KEGG: oih:OB3304 penicillin acylase; PFAM: Peptidase S45, penicillin amidase; acyl-homoserine-lactone acylase 3805971 10365393 Psed_3557 Pseudonocardia dioxanivorans CB1190 acyl-homoserine-lactone acylase YP_004333583.1 3803635 D 675635 CDS YP_004333584.1 331697345 10365394 complement(3805995..3807122) 1 NC_015312.1 KEGG: tbi:Tbis_2612 PucR family transcriptional regulator; PucR family transcriptional regulator 3807122 10365394 Psed_3558 Pseudonocardia dioxanivorans CB1190 PucR family transcriptional regulator YP_004333584.1 3805995 R 675635 CDS YP_004333585.1 331697346 10365396 complement(3807720..3808211) 1 NC_015312.1 KEGG: cai:Caci_5963 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 3808211 10365396 Psed_3560 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004333585.1 3807720 R 675635 CDS YP_004333586.1 331697347 10365397 3808310..3808879 1 NC_015312.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: fri:FraEuI1c_2884 aromatic-ring-hydroxylating dioxygenase beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 3808879 10365397 Psed_3561 Pseudonocardia dioxanivorans CB1190 aromatic-ring-hydroxylating dioxygenase subunit beta YP_004333586.1 3808310 D 675635 CDS YP_004333587.1 331697348 10365398 3809228..3810130 1 NC_015312.1 PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: tfu:Tfu_0484 streptogrisin C. Serine peptidase. MEROPS family S01A; peptidase S1 and S6 chymotrypsin/Hap 3810130 10365398 Psed_3562 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004333587.1 3809228 D 675635 CDS YP_004333588.1 331697349 10365399 complement(3810142..3811512) 1 NC_015312.1 KEGG: svi:Svir_15240 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA 3811512 10365399 Psed_3563 Pseudonocardia dioxanivorans CB1190 ATPase AAA YP_004333588.1 3810142 R 675635 CDS YP_004333589.1 331697350 10365400 3811805..3813058 1 NC_015312.1 KEGG: rop:ROP_63240 aminotransferase; PFAM: Aminotransferase, class I/classII; GntR family transcriptional regulator 3813058 10365400 Psed_3564 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333589.1 3811805 D 675635 CDS YP_004333590.1 331697351 10365401 3813070..3813561 1 NC_015312.1 KEGG: aac:Aaci_2663 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 3813561 10365401 Psed_3565 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004333590.1 3813070 D 675635 CDS YP_004333591.1 331697352 10365402 3813571..3814725 1 NC_015312.1 KEGG: bts:Btus_0692 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; aspartate transaminase 3814725 10365402 Psed_3566 Pseudonocardia dioxanivorans CB1190 aspartate transaminase YP_004333591.1 3813571 D 675635 CDS YP_004333592.1 331697353 10365403 3814955..3815164 1 NC_015312.1 hypothetical protein 3815164 10365403 Psed_3567 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333592.1 3814955 D 675635 CDS YP_004333593.1 331697354 10365404 complement(3815304..3816599) 1 NC_015312.1 PFAM: Lipase, GDSL; KEGG: sen:SACE_3285 lipolytic enzyme, G-D-S-L; G-D-S-L family lipolytic protein 3816599 10365404 Psed_3568 Pseudonocardia dioxanivorans CB1190 G-D-S-L family lipolytic protein YP_004333593.1 3815304 R 675635 CDS YP_004333594.1 331697355 10365405 complement(3816684..3817880) 1 NC_015312.1 KEGG: sen:SACE_2043 hypothetical protein; hypothetical protein 3817880 10365405 Psed_3569 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333594.1 3816684 R 675635 CDS YP_004333595.1 331697356 10365406 complement(3818322..3820106) 1 NC_015312.1 TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: sen:SACE_2041 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase 3820106 10365406 Psed_3570 Pseudonocardia dioxanivorans CB1190 aspartyl-tRNA synthetase YP_004333595.1 3818322 R 675635 CDS YP_004333596.1 331697357 10365407 complement(3820267..3822933) 1 NC_015312.1 KEGG: amd:AMED_2699 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Hedgehog/intein hint, N-terminal; Hedgehog/intein hint domain, C-terminal; Radical SAM domain-containing protein 3822933 10365407 Psed_3571 Pseudonocardia dioxanivorans CB1190 Radical SAM domain-containing protein YP_004333596.1 3820267 R 675635 CDS YP_004333597.1 331697358 10365408 3823042..3823596 1 NC_015312.1 TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; KEGG: kra:Krad_0597 carbohydrate kinase, thermoresistant glucokinase; PFAM: Shikimate kinase; thermoresistant glucokinase carbohydrate kinase 3823596 10365408 Psed_3572 Pseudonocardia dioxanivorans CB1190 thermoresistant glucokinase carbohydrate kinase YP_004333597.1 3823042 D 675635 CDS YP_004333598.1 331697359 10365409 3823705..3825255 1 NC_015312.1 PFAM: YibE/F-like; KEGG: amd:AMED_5281 YibE/F-like protein; hypothetical protein 3825255 10365409 Psed_3573 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333598.1 3823705 D 675635 CDS YP_004333599.1 331697360 10365410 complement(3825203..3825796) 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: msp:Mspyr1_25700 ribosomal protein L11 methylase; type 12 methyltransferase 3825796 10365410 Psed_3574 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004333599.1 3825203 R 675635 CDS YP_004333600.1 331697361 10365411 complement(3825803..3827119) 1 NC_015312.1 PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: nfa:nfa36640 histidyl-tRNA synthetase; histidyl-tRNA synthetase 3827119 10365411 Psed_3575 Pseudonocardia dioxanivorans CB1190 histidyl-tRNA synthetase YP_004333600.1 3825803 R 675635 CDS YP_004333601.1 331697362 10365412 complement(3827116..3827808) 1 NC_015312.1 KEGG: ami:Amir_1700 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 3827808 10365412 Psed_3576 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004333601.1 3827116 R 675635 CDS YP_004333602.1 331697363 10365413 3827922..3828722 1 NC_015312.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: sen:SACE_2030 peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 3828722 10365413 Psed_3577 Pseudonocardia dioxanivorans CB1190 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004333602.1 3827922 D 675635 CDS YP_004333603.1 331697364 10365414 complement(3828835..3831300) 1 NC_015312.1 SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; TIGRFAM: RelA/SpoT protein; KEGG: ami:Amir_1698 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD subdomain; TGS; Amino acid-binding ACT; (p)ppGpp synthetase I SpoT/RelA 3831300 10365414 Psed_3578 Pseudonocardia dioxanivorans CB1190 (p)ppGpp synthetase I SpoT/RelA YP_004333603.1 3828835 R 675635 CDS YP_004333604.1 331697365 10365415 complement(3831334..3831897) 1 NC_015312.1 KEGG: sen:SACE_2027 adenine phosphoribosyltransferase; HAMAP: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase 3831897 10365415 Psed_3579 Pseudonocardia dioxanivorans CB1190 adenine phosphoribosyltransferase YP_004333604.1 3831334 R 675635 CDS YP_004333605.1 331697366 10365416 complement(3831894..3833120) 1 NC_015312.1 KEGG: sen:SACE_2026 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecF 3833120 10365416 Psed_3580 Pseudonocardia dioxanivorans CB1190 protein-export membrane protein SecF YP_004333605.1 3831894 R 675635 CDS YP_004333606.1 331697367 10365417 complement(3833122..3834945) 1 NC_015312.1 KEGG: svi:Svir_15100 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecD 3834945 10365417 Psed_3581 Pseudonocardia dioxanivorans CB1190 protein-export membrane protein SecD YP_004333606.1 3833122 R 675635 CDS YP_004333607.1 331697368 10365418 complement(3835025..3835540) 1 NC_015312.1 KEGG: ami:Amir_1694 preprotein translocase, YajC subunit; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase YajC; preprotein translocase subunit YajC 3835540 10365418 Psed_3582 Pseudonocardia dioxanivorans CB1190 preprotein translocase subunit YajC YP_004333607.1 3835025 R 675635 CDS YP_004333608.1 331697369 10365419 complement(3835630..3836670) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: amd:AMED_5299 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; Holliday junction ATP-dependent DNA helicase ruvB 3836670 10365419 Psed_3583 Pseudonocardia dioxanivorans CB1190 Holliday junction ATP-dependent DNA helicase ruvB YP_004333608.1 3835630 R 675635 CDS YP_004333609.1 331697370 10365420 complement(3836696..3837295) 1 NC_015312.1 TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Bacterial DNA recombination protein RuvA; KEGG: ami:Amir_1691 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA 3837295 10365420 Psed_3584 Pseudonocardia dioxanivorans CB1190 Holliday junction ATP-dependent DNA helicase ruvA YP_004333609.1 3836696 R 675635 CDS YP_004333610.1 331697371 10365421 complement(3837292..3837858) 1 NC_015312.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: svi:Svir_15060 Holliday junction resolvase; Crossover junction endodeoxyribonuclease ruvC 3837858 10365421 Psed_3585 Pseudonocardia dioxanivorans CB1190 Crossover junction endodeoxyribonuclease ruvC YP_004333610.1 3837292 R 675635 CDS YP_004333611.1 331697372 10365422 complement(3837983..3838375) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kse:Ksed_20380 lactoylglutathione lyase-like lyase; glyoxalase/bleomycin resistance protein/dioxygenase 3838375 10365422 Psed_3586 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333611.1 3837983 R 675635 CDS YP_004333612.1 331697373 10365423 complement(3838483..3839646) 1 NC_015312.1 KEGG: mil:ML5_4270 hypothetical protein; hypothetical protein 3839646 10365423 Psed_3587 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333612.1 3838483 R 675635 CDS YP_004333613.1 331697374 10365424 complement(3839974..3842793) 1 NC_015312.1 SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; DNA-directed DNA polymerase, family A, palm domain; TIGRFAM: DNA polymerase 1; KEGG: sen:SACE_5437 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; DNA polymerase I 3842793 10365424 Psed_3588 Pseudonocardia dioxanivorans CB1190 DNA polymerase I YP_004333613.1 3839974 R 675635 CDS YP_004333614.1 331697375 10365425 3843047..3843622 1 NC_015312.1 PFAM: Bacterial stress protein; KEGG: fre:Franean1_1054 stress protein; stress protein 3843622 10365425 Psed_3589 Pseudonocardia dioxanivorans CB1190 stress protein YP_004333614.1 3843047 D 675635 CDS YP_004333615.1 331697376 10365426 3843631..3844332 1 NC_015312.1 PFAM: Tellurium resistance; Bacterial stress protein; KEGG: gbr:Gbro_4753 tellurium resistance; Tellurium resistance 3844332 10365426 Psed_3590 Pseudonocardia dioxanivorans CB1190 Tellurium resistance YP_004333615.1 3843631 D 675635 CDS YP_004333616.1 331697377 10365427 3844391..3845569 1 NC_015312.1 KEGG: tcu:Tcur_3189 hypothetical protein; hypothetical protein 3845569 10365427 Psed_3591 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333616.1 3844391 D 675635 CDS YP_004333617.1 331697378 10365429 3848096..3848950 1 NC_015312.1 KEGG: tcu:Tcur_3186 hypothetical protein; hypothetical protein 3848950 10365429 Psed_3593 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333617.1 3848096 D 675635 CDS YP_004333618.1 331697379 10365430 3848988..3849443 1 NC_015312.1 PFAM: Heat shock protein DnaJ-like protein DjlA; KEGG: rha:RHA1_ro01775 tellurium resistance protein; Tellurite resistance TerB 3849443 10365430 Psed_3594 Pseudonocardia dioxanivorans CB1190 Tellurite resistance TerB YP_004333618.1 3848988 D 675635 CDS YP_004333619.1 331697380 10365431 complement(3849537..3851252) 1 NC_015312.1 PFAM: Protein of unknown function DUF475; Bacterial stress protein; KEGG: ske:Sked_33950 hypothetical protein; hypothetical protein 3851252 10365431 Psed_3595 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333619.1 3849537 R 675635 CDS YP_004333620.1 331697381 10365432 complement(3851480..3852388) 1 NC_015312.1 KEGG: pop:POPTR_571331 hypothetical protein; hypothetical protein 3852388 10365432 Psed_3596 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333620.1 3851480 R 675635 CDS YP_004333621.1 331697382 10365433 complement(3852520..3853056) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: stp:Strop_1547 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 3853056 10365433 Psed_3597 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004333621.1 3852520 R 675635 CDS YP_004333622.1 331697383 10365434 complement(3853112..3853498) 1 NC_015312.1 hypothetical protein 3853498 10365434 Psed_3598 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333622.1 3853112 R 675635 CDS YP_004333623.1 331697384 10365435 complement(3853621..3854373) 1 NC_015312.1 TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: sma:SAV_6832 hypothetical protein; PFAM: Protein of unknown function DUF28; hypothetical protein 3854373 10365435 Psed_3599 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333623.1 3853621 R 675635 CDS YP_004333624.1 331697385 10365436 complement(3854538..3855191) 1 NC_015312.1 TIGRFAM: Glutamine amidotransferase subunit PdxT; HAMAP: Glutamine amidotransferase subunit PdxT; KEGG: ami:Amir_2109 SNO glutamine amidotransferase; PFAM: Glutamine amidotransferase subunit PdxT; glutamine amidotransferase subunit pdxT 3855191 10365436 Psed_3600 Pseudonocardia dioxanivorans CB1190 glutamine amidotransferase subunit pdxT YP_004333624.1 3854538 R 675635 CDS YP_004333625.1 331697386 10365437 complement(3855216..3856616) 1 NC_015312.1 KEGG: ami:Amir_0465 malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding; malic protein NAD-binding protein 3856616 10365437 Psed_3601 Pseudonocardia dioxanivorans CB1190 malic protein NAD-binding protein YP_004333625.1 3855216 R 675635 CDS YP_004333626.1 331697387 10365438 3856745..3858898 1 NC_015312.1 TIGRFAM: Small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: amd:AMED_5317 elongation factor EF-G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; small GTP-binding protein 3858898 10365438 Psed_3602 Pseudonocardia dioxanivorans CB1190 small GTP-binding protein YP_004333626.1 3856745 D 675635 CDS YP_004333627.1 331697388 10365439 complement(3858984..3859292) 1 NC_015312.1 PFAM: Branched-chain amino acid transport, AzlD; KEGG: tcu:Tcur_0680 branched-chain amino acid transport; branched-chain amino acid transport 3859292 10365439 Psed_3603 Pseudonocardia dioxanivorans CB1190 branched-chain amino acid transport YP_004333627.1 3858984 R 675635 CDS YP_004333628.1 331697389 10365440 complement(3859289..3860020) 1 NC_015312.1 PFAM: Branched-chain amino acid transport, permease; KEGG: sna:Snas_2053 AzlC family protein; AzlC family protein 3860020 10365440 Psed_3604 Pseudonocardia dioxanivorans CB1190 AzlC family protein YP_004333628.1 3859289 R 675635 CDS YP_004333629.1 331697390 10365441 3860075..3860647 1 NC_015312.1 KEGG: sen:SACE_2013 DNA-binding protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 3860647 10365441 Psed_3605 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004333629.1 3860075 D 675635 CDS YP_004333630.1 331697391 10365442 complement(3860697..3861716) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tcu:Tcur_4812 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 3861716 10365442 Psed_3606 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004333630.1 3860697 R 675635 CDS YP_004333631.1 331697392 10365443 complement(3861819..3862748) 1 NC_015312.1 TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Vitamin B6 biosynthesis protein; KEGG: sna:Snas_2410 pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; pyridoxal biosynthesis lyase pdxS 3862748 10365443 Psed_3607 Pseudonocardia dioxanivorans CB1190 pyridoxal biosynthesis lyase pdxS YP_004333631.1 3861819 R 675635 CDS YP_004333632.1 331697393 10365444 complement(3862792..3863352) 1 NC_015312.1 KEGG: ami:Amir_2095 NUDIX hydrolase; NUDIX hydrolase 3863352 10365444 Psed_3608 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004333632.1 3862792 R 675635 CDS YP_004333633.1 331697394 10365445 complement(3863352..3864542) 1 NC_015312.1 KEGG: ami:Amir_2094 phosphatidylinositol alpha-mannosyltransferase; PFAM: Glycosyl transferase, group 1; phosphatidylinositol alpha-mannosyltransferase 3864542 10365445 Psed_3609 Pseudonocardia dioxanivorans CB1190 phosphatidylinositol alpha-mannosyltransferase YP_004333633.1 3863352 R 675635 CDS YP_004333634.1 331697395 10365446 complement(3864539..3865459) 1 NC_015312.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: amd:AMED_5323 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 3865459 10365446 Psed_3610 Pseudonocardia dioxanivorans CB1190 lipid A biosynthesis acyltransferase YP_004333634.1 3864539 R 675635 CDS YP_004333635.1 331697396 10365447 complement(3865456..3866085) 1 NC_015312.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sen:SACE_2007 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 3866085 10365447 Psed_3611 Pseudonocardia dioxanivorans CB1190 CDP-alcohol phosphatidyltransferase YP_004333635.1 3865456 R 675635 CDS YP_004333636.1 331697397 10365448 complement(3866138..3866710) 1 NC_015312.1 PFAM: Histidine triad (HIT) protein; KEGG: nfa:nfa37110 hypothetical protein; histidine triad (HIT) protein 3866710 10365448 Psed_3612 Pseudonocardia dioxanivorans CB1190 histidine triad (HIT) protein YP_004333636.1 3866138 R 675635 CDS YP_004333637.1 331697398 10365449 complement(3866721..3868769) 1 NC_015312.1 TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding; KEGG: svi:Svir_14910 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD; threonyl-tRNA synthetase 3868769 10365449 Psed_3613 Pseudonocardia dioxanivorans CB1190 threonyl-tRNA synthetase YP_004333637.1 3866721 R 675635 CDS YP_004333638.1 331697399 10365450 complement(3868813..3870999) 1 NC_015312.1 KEGG: gga:396544 nascent polypeptide-associated complex alpha subunit; hypothetical protein 3870999 10365450 Psed_3614 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333638.1 3868813 R 675635 CDS YP_004333639.1 331697400 10365451 complement(3871033..3871473) 1 NC_015312.1 KEGG: fri:FraEuI1c_2570 hypothetical protein; hypothetical protein 3871473 10365451 Psed_3615 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333639.1 3871033 R 675635 CDS YP_004333640.1 331697401 10365452 3871643..3872992 1 NC_015312.1 KEGG: fre:Franean1_0008 hypothetical protein; hypothetical protein 3872992 10365452 Psed_3616 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333640.1 3871643 D 675635 CDS YP_004333641.1 331697402 10365453 complement(3873792..3874952) 1 NC_015312.1 KEGG: ade:Adeh_0244 LigA; hypothetical protein 3874952 10365453 Psed_3617 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333641.1 3873792 R 675635 CDS YP_004333642.1 331697403 10365454 3875198..3877333 1 NC_015312.1 PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; KEGG: mva:Mvan_6036 glycosyl transferase protein; glycosyl transferase protein 3877333 10365454 Psed_3618 Pseudonocardia dioxanivorans CB1190 glycosyl transferase protein YP_004333642.1 3875198 D 675635 CDS YP_004333643.1 331697404 10365455 3877330..3877635 1 NC_015312.1 hypothetical protein 3877635 10365455 Psed_3619 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333643.1 3877330 D 675635 CDS YP_004333644.1 331697405 10365456 complement(3877623..3878318) 1 NC_015312.1 KEGG: sco:SCO0723 fructose transport system kinase; fructose transport system kinase 3878318 10365456 Psed_3620 Pseudonocardia dioxanivorans CB1190 fructose transport system kinase YP_004333644.1 3877623 R 675635 CDS YP_004333645.1 331697406 10365457 3878361..3879497 1 NC_015312.1 KEGG: sco:SCO5944 hypothetical protein; hypothetical protein 3879497 10365457 Psed_3621 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333645.1 3878361 D 675635 CDS YP_004333646.1 331697407 10365458 3879613..3880353 1 NC_015312.1 KEGG: art:Arth_2739 MerR family transcriptional regulator; PFAM: TipAS antibiotic-recognition; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; antibiotic resistance transcriptional regulator, MerR family 3880353 10365458 Psed_3622 Pseudonocardia dioxanivorans CB1190 antibiotic resistance transcriptional regulator, MerR family YP_004333646.1 3879613 D 675635 CDS YP_004333647.1 331697408 10365459 complement(3880329..3882806) 1 NC_015312.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; PAS fold; PAS fold-3; GAF; KEGG: sro:Sros_3356 serine phosphatase RsbU regulator of sigma subunit-like protein; SMART: Protein phosphatase 2C-like; PAS; PAC motif; PAS/PAC sensor protein 3882806 10365459 Psed_3623 Pseudonocardia dioxanivorans CB1190 PAS/PAC sensor protein YP_004333647.1 3880329 R 675635 CDS YP_004333648.1 331697409 10365460 3882951..3883346 1 NC_015312.1 KEGG: rop:ROP_51030 hypothetical protein; hypothetical protein 3883346 10365460 Psed_3624 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333648.1 3882951 D 675635 CDS YP_004333649.1 331697410 10365461 3883381..3884166 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: app:CAP2UW1_1059 alpha/beta hydrolase fold protein; alpha/beta hydrolase 3884166 10365461 Psed_3625 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004333649.1 3883381 D 675635 CDS YP_004333650.1 331697411 10365462 complement(3884129..3884539) 1 NC_015312.1 KEGG: gob:Gobs_0315 PPOX class F420-dependent enzyme; TIGRFAM: Probable F420-dependent enzyme, PPOX class, family Rv0121; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 3884539 10365462 Psed_3626 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004333650.1 3884129 R 675635 CDS YP_004333651.1 331697412 10365463 3884582..3885286 1 NC_015312.1 KEGG: cai:Caci_0619 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 3885286 10365463 Psed_3627 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004333651.1 3884582 D 675635 CDS YP_004333652.1 331697413 10365464 3885379..3886365 1 NC_015312.1 PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: mau:Micau_2195 pirin domain-containing protein; pirin 3886365 10365464 Psed_3628 Pseudonocardia dioxanivorans CB1190 pirin YP_004333652.1 3885379 D 675635 CDS YP_004333653.1 331697414 10365465 3886362..3886649 1 NC_015312.1 KEGG: nda:Ndas_2917 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 3886649 10365465 Psed_3629 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004333653.1 3886362 D 675635 CDS YP_004333654.1 331697415 10365466 3886736..3889897 1 NC_015312.1 KEGG: amd:AMED_3525 helicase; PFAM: SNF2-related; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SNF2-like protein 3889897 10365466 Psed_3630 Pseudonocardia dioxanivorans CB1190 SNF2-like protein YP_004333654.1 3886736 D 675635 CDS YP_004333655.1 331697416 10365467 3889887..3890753 1 NC_015312.1 KEGG: mtb:TBMG_01880 hypothetical protein; hypothetical protein 3890753 10365467 Psed_3631 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333655.1 3889887 D 675635 CDS YP_004333656.1 331697417 10365468 complement(3890763..3891638) 1 NC_015312.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: gob:Gobs_4864 export protein; DnaJ domain-containing protein 3891638 10365468 Psed_3632 Pseudonocardia dioxanivorans CB1190 DnaJ domain-containing protein YP_004333656.1 3890763 R 675635 CDS YP_004333657.1 331697418 10365469 3891691..3892863 1 NC_015312.1 KEGG: svi:Svir_19090 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; cystathionine gamma-synthase 3892863 10365469 Psed_3633 Pseudonocardia dioxanivorans CB1190 cystathionine gamma-synthase YP_004333657.1 3891691 D 675635 CDS YP_004333658.1 331697419 10365470 complement(3892864..3894129) 1 NC_015312.1 KEGG: cai:Caci_2641 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 3894129 10365470 Psed_3634 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004333658.1 3892864 R 675635 CDS YP_004333659.1 331697420 10365471 complement(3894122..3894757) 1 NC_015312.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: nfa:nfa31470 GTP cyclohydrolase I; GTP cyclohydrolase I 3894757 10365471 Psed_3635 Pseudonocardia dioxanivorans CB1190 GTP cyclohydrolase I YP_004333659.1 3894122 R 675635 CDS YP_004333660.1 331697421 10365472 3894852..3895523 1 NC_015312.1 KEGG: nml:Namu_3645 transcriptional regulator; transcriptional regulator 3895523 10365472 Psed_3636 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004333660.1 3894852 D 675635 CDS YP_004333661.1 331697422 10365473 complement(3895511..3897574) 1 NC_015312.1 KEGG: sen:SACE_0314 penicillin binding protein (class A); PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase 3897574 10365473 Psed_3637 Pseudonocardia dioxanivorans CB1190 peptidoglycan glycosyltransferase YP_004333661.1 3895511 R 675635 CDS YP_004333662.1 331697423 10365474 3897878..3898147 1 NC_015312.1 TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: nml:Namu_3893 twin-arginine translocation protein, TatA/E family subunit; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; Sec-independent protein translocase tatA/E-like protein 3898147 10365474 Psed_3638 Pseudonocardia dioxanivorans CB1190 Sec-independent protein translocase tatA/E-like protein YP_004333662.1 3897878 D 675635 CDS YP_004333663.1 331697424 10365475 complement(3898774..3899529) 1 NC_015312.1 KEGG: sen:SACE_0700 short chain dehydrogenase/reductase oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 3899529 10365475 Psed_3639 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004333663.1 3898774 R 675635 CDS YP_004333664.1 331697425 10365476 3899675..3900004 1 NC_015312.1 KEGG: mch:Mchl_5398 hypothetical protein; hypothetical protein 3900004 10365476 Psed_3640 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333664.1 3899675 D 675635 CDS YP_004333665.1 331697426 10365477 3900021..3900923 1 NC_015312.1 PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; KEGG: tbi:Tbis_2043 shikimate-5-dehydrogenase; shikimate dehydrogenase substrate binding domain-containing protein 3900923 10365477 Psed_3641 Pseudonocardia dioxanivorans CB1190 shikimate dehydrogenase substrate binding domain-containing protein YP_004333665.1 3900021 D 675635 CDS YP_004333666.1 331697427 10365478 3900916..3901722 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: gob:Gobs_0254 type 11 methyltransferase; type 11 methyltransferase 3901722 10365478 Psed_3642 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004333666.1 3900916 D 675635 CDS YP_004333667.1 331697428 10365479 3901787..3902152 1 NC_015312.1 KEGG: cmi:CMM_0491 hypothetical protein; hypothetical protein 3902152 10365479 Psed_3643 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333667.1 3901787 D 675635 CDS YP_004333668.1 331697429 10365480 3902222..3902701 1 NC_015312.1 KEGG: amd:AMED_3031 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3902701 10365480 Psed_3644 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004333668.1 3902222 D 675635 CDS YP_004333669.1 331697430 10365481 3902698..3903528 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: rop:ROP_48820 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 3903528 10365481 Psed_3645 Pseudonocardia dioxanivorans CB1190 polyamine-transporting ATPase YP_004333669.1 3902698 D 675635 CDS YP_004333670.1 331697431 10365482 3903488..3904315 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: amd:AMED_3028 ABC-2 type transporter; ABC transporter 3904315 10365482 Psed_3646 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004333670.1 3903488 D 675635 CDS YP_004333671.1 331697432 10365483 3904356..3906017 1 NC_015312.1 TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; KEGG: sco:SCO7443 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucomutase, alpha-D-glucose phosphate-specific 3906017 10365483 Psed_3647 Pseudonocardia dioxanivorans CB1190 phosphoglucomutase, alpha-D-glucose phosphate-specific YP_004333671.1 3904356 D 675635 CDS YP_004333672.1 331697433 10365484 3906019..3906789 1 NC_015312.1 KEGG: kra:Krad_3319 ROK family protein; PFAM: ROK; polyphosphate--glucose phosphotransferase 3906789 10365484 Psed_3648 Pseudonocardia dioxanivorans CB1190 polyphosphate--glucose phosphotransferase YP_004333672.1 3906019 D 675635 CDS YP_004333673.1 331697434 10365485 complement(3906832..3907332) 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 3907332 10365485 Psed_3649 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004333673.1 3906832 R 675635 CDS YP_004333674.1 331697435 10365486 complement(3907584..3907994) 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: rha:RHA1_ro08339 hypothetical protein; anti-sigma-factor antagonist 3907994 10365486 Psed_3650 Pseudonocardia dioxanivorans CB1190 anti-sigma-factor antagonist YP_004333674.1 3907584 R 675635 CDS YP_004333675.1 331697436 10365487 3908289..3908585 1 NC_015312.1 hypothetical protein 3908585 10365487 Psed_3651 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333675.1 3908289 D 675635 CDS YP_004333676.1 331697437 10365488 complement(3908602..3908889) 1 NC_015312.1 hypothetical protein 3908889 10365488 Psed_3652 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333676.1 3908602 R 675635 CDS YP_004333677.1 331697438 10365489 3909029..3909415 1 NC_015312.1 hypothetical protein 3909415 10365489 Psed_3653 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333677.1 3909029 D 675635 CDS YP_004333678.1 331697439 10365490 complement(3909416..3910903) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_4222 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein 3910903 10365490 Psed_3654 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004333678.1 3909416 R 675635 CDS YP_004333679.1 331697440 10365491 3910935..3911555 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_1662 transcriptional regulator, TetR family; TetR family transcriptional regulator 3911555 10365491 Psed_3655 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333679.1 3910935 D 675635 CDS YP_004333680.1 331697441 10365492 3911599..3912126 1 NC_015312.1 KEGG: kra:Krad_3604 hypothetical protein; hypothetical protein 3912126 10365492 Psed_3656 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333680.1 3911599 D 675635 CDS YP_004333681.1 331697442 10365494 3912835..3913881 1 NC_015312.1 KEGG: nml:Namu_4893 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-G type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Nuclear transport factor 2; ECF subfamily RNA polymerase sigma-24 subunit 3913881 10365494 Psed_3658 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004333681.1 3912835 D 675635 CDS YP_004333682.1 331697443 10365495 3914042..3914869 1 NC_015312.1 PFAM: Protein of unknown function DUF574; KEGG: sen:SACE_4240 hypothetical protein; hypothetical protein 3914869 10365495 Psed_3659 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333682.1 3914042 D 675635 CDS YP_004333683.1 331697444 10365496 complement(3914930..3915820) 1 NC_015312.1 SMART: Helix-turn-helix type 3; KEGG: sro:Sros_7488 hypothetical protein; helix-turn-helix domain-containing protein 3915820 10365496 Psed_3660 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004333683.1 3914930 R 675635 CDS YP_004333684.1 331697445 10365497 complement(3916016..3916330) 1 NC_015312.1 PFAM: Domain of unknown function DUF397; KEGG: sro:Sros_5628 hypothetical protein; hypothetical protein 3916330 10365497 Psed_3661 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333684.1 3916016 R 675635 CDS YP_004333685.1 331697446 10365498 3916425..3916811 1 NC_015312.1 hypothetical protein 3916811 10365498 Psed_3662 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333685.1 3916425 D 675635 CDS YP_004333686.1 331697447 10365499 3916942..3918063 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: scl:sce5461 glycogen synthase; group 1 glycosyl transferase 3918063 10365499 Psed_3663 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004333686.1 3916942 D 675635 CDS YP_004333687.1 331697448 10365500 complement(3918050..3919228) 1 NC_015312.1 TIGRFAM: Galactokinase; KEGG: svi:Svir_14320 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; galactokinase 3919228 10365500 Psed_3664 Pseudonocardia dioxanivorans CB1190 galactokinase YP_004333687.1 3918050 R 675635 CDS YP_004333688.1 331697449 10365501 complement(3919225..3920301) 1 NC_015312.1 TIGRFAM: Galactose-1-phosphate uridyl transferase, class I; KEGG: mau:Micau_5380 galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal; Galactose-1-phosphate uridyl transferase, C-terminal; galactose-1-phosphate uridylyltransferase 3920301 10365501 Psed_3665 Pseudonocardia dioxanivorans CB1190 galactose-1-phosphate uridylyltransferase YP_004333688.1 3919225 R 675635 CDS YP_004333689.1 331697450 10365502 complement(3920298..3921092) 1 NC_015312.1 KEGG: ami:Amir_0618 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; DeoR family transcriptional regulator 3921092 10365502 Psed_3666 Pseudonocardia dioxanivorans CB1190 DeoR family transcriptional regulator YP_004333689.1 3920298 R 675635 CDS YP_004333690.1 331697451 10365503 3921371..3923071 1 NC_015312.1 KEGG: ami:Amir_6118 SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter; SSS sodium solute transporter superfamily protein 3923071 10365503 Psed_3667 Pseudonocardia dioxanivorans CB1190 SSS sodium solute transporter superfamily protein YP_004333690.1 3921371 D 675635 CDS YP_004333691.1 331697452 10365504 3923097..3923444 1 NC_015312.1 KEGG: kra:Krad_3708 hypothetical protein; hypothetical protein 3923444 10365504 Psed_3668 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333691.1 3923097 D 675635 CDS YP_004333692.1 331697453 10365505 complement(3923586..3923708) 1 NC_015312.1 hypothetical protein 3923708 10365505 Psed_3669 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333692.1 3923586 R 675635 CDS YP_004333693.1 331697454 10365506 3923959..3925113 1 NC_015312.1 KEGG: sen:SACE_4589 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 3925113 10365506 Psed_3670 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004333693.1 3923959 D 675635 CDS YP_004333694.1 331697455 10365507 complement(3925091..3925843) 1 NC_015312.1 KEGG: tcu:Tcur_4638 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 3925843 10365507 Psed_3671 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333694.1 3925091 R 675635 CDS YP_004333695.1 331697456 10365508 3926353..3926934 1 NC_015312.1 KEGG: amd:AMED_5080 hypothetical protein; hypothetical protein 3926934 10365508 Psed_3672 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333695.1 3926353 D 675635 CDS YP_004333696.1 331697457 10365509 complement(3926996..3928480) 1 NC_015312.1 KEGG: sro:Sros_8238 carbohydrate kinase, FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; Xylulokinase 3928480 10365509 Psed_3673 Pseudonocardia dioxanivorans CB1190 Xylulokinase YP_004333696.1 3926996 R 675635 CDS YP_004333697.1 331697458 10365510 3928504..3929172 1 NC_015312.1 KEGG: svi:Svir_32120 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: Class II aldolase/adducin, N-terminal; L-fuculose-phosphate aldolase 3929172 10365510 Psed_3674 Pseudonocardia dioxanivorans CB1190 L-fuculose-phosphate aldolase YP_004333697.1 3928504 D 675635 CDS YP_004333698.1 331697459 10365511 complement(3929159..3930382) 1 NC_015312.1 KEGG: fre:Franean1_0930 PucR family transcriptional regulator; transcriptional regulator CdaR 3930382 10365511 Psed_3675 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004333698.1 3929159 R 675635 CDS YP_004333699.1 331697460 10365512 3930482..3931465 1 NC_015312.1 KEGG: sco:SCO6759 phytoene synthase; TIGRFAM: Squalene synthase HpnC; PFAM: Squalene/phytoene synthase; squalene synthase HpnC 3931465 10365512 Psed_3676 Pseudonocardia dioxanivorans CB1190 squalene synthase HpnC YP_004333699.1 3930482 D 675635 CDS YP_004333700.1 331697461 10365513 3931462..3932394 1 NC_015312.1 TIGRFAM: Squalene/phytoene synthase HpnD; KEGG: fre:Franean1_5716 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; squalene synthase HpnD 3932394 10365513 Psed_3677 Pseudonocardia dioxanivorans CB1190 squalene synthase HpnD YP_004333700.1 3931462 D 675635 CDS YP_004333701.1 331697462 10365514 3932391..3933824 1 NC_015312.1 KEGG: scb:SCAB_12971 phytoene dehydrogenase; TIGRFAM: Squalene-associated FAD-dependent desaturase; PFAM: Amine oxidase; squalene-associated FAD-dependent desaturase 3933824 10365514 Psed_3678 Pseudonocardia dioxanivorans CB1190 squalene-associated FAD-dependent desaturase YP_004333701.1 3932391 D 675635 CDS YP_004333702.1 331697463 10365515 3933821..3934891 1 NC_015312.1 KEGG: sma:SAV_2997 polyprenyl diphosphate synthase; PFAM: Polyprenyl synthetase; Dimethylallyltranstransferase 3934891 10365515 Psed_3679 Pseudonocardia dioxanivorans CB1190 Dimethylallyltranstransferase YP_004333702.1 3933821 D 675635 CDS YP_004333703.1 331697464 10365516 3934891..3936798 1 NC_015312.1 TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: ace:Acel_1697 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 3936798 10365516 Psed_3680 Pseudonocardia dioxanivorans CB1190 squalene-hopene cyclase YP_004333703.1 3934891 D 675635 CDS YP_004333704.1 331697465 10365517 3936795..3938324 1 NC_015312.1 PFAM: LytB protein; Nucleoside phosphorylase domain; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: fri:FraEuI1c_5916 hydroxymethylbutenyl pyrophosphate reductase; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3938324 10365517 Psed_3681 Pseudonocardia dioxanivorans CB1190 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_004333704.1 3936795 D 675635 CDS YP_004333705.1 331697466 10365518 3938324..3939328 1 NC_015312.1 KEGG: sgr:SGR_960 hypothetical protein; TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM; hopanoid biosynthesis associated radical SAM protein HpnH 3939328 10365518 Psed_3682 Pseudonocardia dioxanivorans CB1190 hopanoid biosynthesis associated radical SAM protein HpnH YP_004333705.1 3938324 D 675635 CDS YP_004333706.1 331697467 10365519 3939461..3940135 1 NC_015312.1 KEGG: sen:SACE_4324 hypothetical protein; hypothetical protein 3940135 10365519 Psed_3683 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333706.1 3939461 D 675635 CDS YP_004333707.1 331697468 10365520 complement(3940153..3941265) 1 NC_015312.1 PFAM: Monogalactosyldiacylglycerol synthase; Glycosyl transferase, family 28, C-terminal; KEGG: sen:SACE_4322 hypothetical protein; monogalactosyldiacylglycerol synthase 3941265 10365520 Psed_3684 Pseudonocardia dioxanivorans CB1190 monogalactosyldiacylglycerol synthase YP_004333707.1 3940153 R 675635 CDS YP_004333708.1 331697469 10365521 3941364..3943964 1 NC_015312.1 PFAM: O-acyltransferase, WSD1, N-terminal; KEGG: sen:SACE_4322 hypothetical protein; hypothetical protein 3943964 10365521 Psed_3685 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333708.1 3941364 D 675635 CDS YP_004333709.1 331697470 10365522 3943996..3944925 1 NC_015312.1 KEGG: sen:SACE_4320 integral membrane protein; hypothetical protein 3944925 10365522 Psed_3686 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333709.1 3943996 D 675635 CDS YP_004333710.1 331697471 10365523 3944922..3945665 1 NC_015312.1 KEGG: sen:SACE_4323 short chain dehydrogenase/reductase oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 3945665 10365523 Psed_3687 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004333710.1 3944922 D 675635 CDS YP_004333711.1 331697472 10365524 complement(3945914..3946354) 1 NC_015312.1 PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: sro:Sros_5387 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase 3946354 10365524 Psed_3688 Pseudonocardia dioxanivorans CB1190 3-dehydroquinate dehydratase YP_004333711.1 3945914 R 675635 CDS YP_004333712.1 331697473 10365525 3946373..3946972 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: cak:Caul_3647 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 3946972 10365525 Psed_3689 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004333712.1 3946373 D 675635 CDS YP_004333713.1 331697474 10365526 3947026..3947484 1 NC_015312.1 KEGG: req:REQ_03160 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 3947484 10365526 Psed_3690 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004333713.1 3947026 D 675635 CDS YP_004333714.1 331697475 10365527 complement(3947678..3949036) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bch:Bcen2424_0180 major facilitator transporter; major facilitator superfamily protein 3949036 10365527 Psed_3691 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333714.1 3947678 R 675635 CDS YP_004333715.1 331697476 10365528 complement(3949039..3950181) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: tcu:Tcur_4712 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 3950181 10365528 Psed_3692 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004333715.1 3949039 R 675635 CDS YP_004333716.1 331697477 10365529 complement(3950178..3951356) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: rer:RER_00660 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 3951356 10365529 Psed_3693 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004333716.1 3950178 R 675635 CDS YP_004333717.1 331697478 10365530 complement(3951353..3952318) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_00650 ABC transporter permease; ABC transporter permease 3952318 10365530 Psed_3694 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333717.1 3951353 R 675635 CDS YP_004333718.1 331697479 10365531 complement(3952311..3953354) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0116 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 3953354 10365531 Psed_3695 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333718.1 3952311 R 675635 CDS YP_004333719.1 331697480 10365532 complement(3953362..3953706) 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: mav:MAV_3500 ferredoxin FdxA; 4Fe-4S ferredoxin 3953706 10365532 Psed_3696 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004333719.1 3953362 R 675635 CDS YP_004333720.1 331697481 10365533 complement(3953749..3955374) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter substrate-binding protein 3955374 10365533 Psed_3697 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333720.1 3953749 R 675635 CDS YP_004333721.1 331697482 10365534 complement(3955519..3956874) 1 NC_015312.1 KEGG: reu:Reut_B5781 Rieske (2Fe-2S) region; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase 3956874 10365534 Psed_3698 Pseudonocardia dioxanivorans CB1190 phthalate 4,5-dioxygenase YP_004333721.1 3955519 R 675635 CDS YP_004333722.1 331697483 10365535 complement(3956956..3957639) 1 NC_015312.1 PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: svi:Svir_38400 4-carboxy-4-hydroxy-2-oxoadipate aldolase; dimethylmenaquinone methyltransferase 3957639 10365535 Psed_3699 Pseudonocardia dioxanivorans CB1190 dimethylmenaquinone methyltransferase YP_004333722.1 3956956 R 675635 CDS YP_004333723.1 331697484 10365536 complement(3957648..3958388) 1 NC_015312.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: svi:Svir_38410 uncharacterized LmbE-like protein; LmbE family protein 3958388 10365536 Psed_3700 Pseudonocardia dioxanivorans CB1190 LmbE family protein YP_004333723.1 3957648 R 675635 CDS YP_004333724.1 331697485 10365537 3958613..3959296 1 NC_015312.1 KEGG: ach:Achl_3363 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 3959296 10365537 Psed_3701 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333724.1 3958613 D 675635 CDS YP_004333725.1 331697486 10365538 3959370..3960512 1 NC_015312.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: rde:RD1_3941 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; vitamin-B12 independent methionine synthase 3960512 10365538 Psed_3702 Pseudonocardia dioxanivorans CB1190 vitamin-B12 independent methionine synthase YP_004333725.1 3959370 D 675635 CDS YP_004333726.1 331697487 10365539 3960520..3961239 1 NC_015312.1 KEGG: svi:Svir_38390 predicted hydrolase or acyltransferase of alpha/beta superfamily; hydrolase or acyltransferase of alpha/beta superfamily 3961239 10365539 Psed_3703 Pseudonocardia dioxanivorans CB1190 hydrolase or acyltransferase of alpha/beta superfamily YP_004333726.1 3960520 D 675635 CDS YP_004333727.1 331697488 10365540 3961307..3961582 1 NC_015312.1 PFAM: Muconolactone delta-isomerase; KEGG: svi:Svir_38380 muconolactone delta-isomerase; Muconolactone delta-isomerase 3961582 10365540 Psed_3704 Pseudonocardia dioxanivorans CB1190 Muconolactone delta-isomerase YP_004333727.1 3961307 D 675635 CDS YP_004333728.1 331697489 10365541 3961585..3963285 1 NC_015312.1 KEGG: azl:AZL_a11060 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; acetolactate synthase 3963285 10365541 Psed_3705 Pseudonocardia dioxanivorans CB1190 acetolactate synthase YP_004333728.1 3961585 D 675635 CDS YP_004333729.1 331697490 10365542 3963348..3964178 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: swi:Swit_2666 alpha/beta hydrolase fold; alpha/beta hydrolase 3964178 10365542 Psed_3706 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004333729.1 3963348 D 675635 CDS YP_004333730.1 331697491 10365543 complement(3964147..3965133) 1 NC_015312.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: bha:BH0777 acetoin dehydrogenase (TPP-dependent) beta chain; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 3965133 10365543 Psed_3707 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333730.1 3964147 R 675635 CDS YP_004333731.1 331697492 10365544 complement(3965130..3966134) 1 NC_015312.1 KEGG: cwo:Cwoe_4083 pyruvate dehydrogenase (acetyl-transferring); PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 3966134 10365544 Psed_3708 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333731.1 3965130 R 675635 CDS YP_004333732.1 331697493 10365545 complement(3966131..3967129) 1 NC_015312.1 PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: dat:HRM2_47610 PdhB; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 3967129 10365545 Psed_3709 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333732.1 3966131 R 675635 CDS YP_004333733.1 331697494 10365546 complement(3967191..3968210) 1 NC_015312.1 KEGG: bha:BH0776 acetoin dehydrogenase (TPP-dependent) alpha chain; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 3968210 10365546 Psed_3710 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333733.1 3967191 R 675635 CDS YP_004333734.1 331697495 10365547 complement(3968207..3969094) 1 NC_015312.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: lch:Lcho_0839 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 3969094 10365547 Psed_3711 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004333734.1 3968207 R 675635 CDS YP_004333735.1 331697496 10365548 complement(3969091..3970548) 1 NC_015312.1 KEGG: cwo:Cwoe_0765 catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase 3970548 10365548 Psed_3712 Pseudonocardia dioxanivorans CB1190 dihydrolipoyllysine-residue acetyltransferase YP_004333735.1 3969091 R 675635 CDS YP_004333736.1 331697497 10365549 complement(3970794..3971858) 1 NC_015312.1 KEGG: nml:Namu_0675 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 3971858 10365549 Psed_3713 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004333736.1 3970794 R 675635 CDS YP_004333737.1 331697498 10365550 3972089..3973138 1 NC_015312.1 KEGG: rxy:Rxyl_0351 alcohol dehydrogenase GroES-like protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; L-iditol 2-dehydrogenase 3973138 10365550 Psed_3714 Pseudonocardia dioxanivorans CB1190 L-iditol 2-dehydrogenase YP_004333737.1 3972089 D 675635 CDS YP_004333738.1 331697499 10365551 complement(3973159..3974121) 1 NC_015312.1 KEGG: pjd:Pjdr2_2937 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase 3974121 10365551 Psed_3715 Pseudonocardia dioxanivorans CB1190 phosphoglycerate dehydrogenase YP_004333738.1 3973159 R 675635 CDS YP_004333739.1 331697500 10365552 complement(3974118..3974882) 1 NC_015312.1 KEGG: mno:Mnod_3276 hypothetical protein; hypothetical protein 3974882 10365552 Psed_3716 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333739.1 3974118 R 675635 CDS YP_004333740.1 331697501 10365553 complement(3974879..3975706) 1 NC_015312.1 KEGG: cwo:Cwoe_5069 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 3975706 10365553 Psed_3717 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333740.1 3974879 R 675635 CDS YP_004333741.1 331697502 10365554 complement(3975746..3976570) 1 NC_015312.1 KEGG: fre:Franean1_6831 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3976570 10365554 Psed_3718 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333741.1 3975746 R 675635 CDS YP_004333742.1 331697503 10365555 complement(3976567..3977280) 1 NC_015312.1 PFAM: cyclase; KEGG: cwo:Cwoe_5006 cyclase protein; cyclase 3977280 10365555 Psed_3719 Pseudonocardia dioxanivorans CB1190 cyclase YP_004333742.1 3976567 R 675635 CDS YP_004333743.1 331697504 10365556 complement(3977277..3978212) 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: htu:Htur_3788 amidohydrolase 2; amidohydrolase 3978212 10365556 Psed_3720 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004333743.1 3977277 R 675635 CDS YP_004333744.1 331697505 10365557 complement(3978209..3978919) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mpt:Mpe_A3531 hydrolase or acyltransferase-like protein; alpha/beta hydrolase 3978919 10365557 Psed_3721 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004333744.1 3978209 R 675635 CDS YP_004333745.1 331697506 10365558 complement(3978924..3979292) 1 NC_015312.1 KEGG: bra:BRADO5799 hypothetical protein; hypothetical protein 3979292 10365558 Psed_3722 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333745.1 3978924 R 675635 CDS YP_004333746.1 331697507 10365559 complement(3979289..3980299) 1 NC_015312.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: sno:Snov_3530 oxidoreductase domain protein; oxidoreductase domain-containing protein 3980299 10365559 Psed_3723 Pseudonocardia dioxanivorans CB1190 oxidoreductase domain-containing protein YP_004333746.1 3979289 R 675635 CDS YP_004333747.1 331697508 10365560 complement(3980299..3981072) 1 NC_015312.1 KEGG: sti:Sthe_3439 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3981072 10365560 Psed_3724 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333747.1 3980299 R 675635 CDS YP_004333748.1 331697509 10365561 complement(3981200..3982456) 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_1562 extracellular ligand-binding receptor; ABC transporter substrate-binding protein 3982456 10365561 Psed_3725 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333748.1 3981200 R 675635 CDS YP_004333749.1 331697510 10365562 complement(3982453..3983364) 1 NC_015312.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: sus:Acid_3282 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 3983364 10365562 Psed_3726 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004333749.1 3982453 R 675635 CDS YP_004333750.1 331697511 10365563 complement(3983571..3984602) 1 NC_015312.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: rha:RHA1_ro08624 acetoin dehydrogenase beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 3984602 10365563 Psed_3727 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333750.1 3983571 R 675635 CDS YP_004333751.1 331697512 10365564 complement(3984595..3985575) 1 NC_015312.1 KEGG: rha:RHA1_ro08623 acetoin dehydrogenase alpha subunit; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 3985575 10365564 Psed_3728 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333751.1 3984595 R 675635 CDS YP_004333752.1 331697513 10365565 complement(3985785..3986603) 1 NC_015312.1 KEGG: bbr:BB2766 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3986603 10365565 Psed_3729 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333752.1 3985785 R 675635 CDS YP_004333753.1 331697514 10365566 3986823..3987383 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll2712 hypothetical protein; carboxymuconolactone decarboxylase 3987383 10365566 Psed_3730 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004333753.1 3986823 D 675635 CDS YP_004333754.1 331697515 10365567 complement(3987473..3988237) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sti:Sthe_3114 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 3988237 10365567 Psed_3731 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004333754.1 3987473 R 675635 CDS YP_004333755.1 331697516 10365568 complement(3988234..3988989) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: met:M446_5639 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 3988989 10365568 Psed_3732 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004333755.1 3988234 R 675635 CDS YP_004333756.1 331697517 10365569 complement(3988993..3990072) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: axy:AXYL_01367 inner-membrane translocator 18; ABC transporter permease 3990072 10365569 Psed_3733 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333756.1 3988993 R 675635 CDS YP_004333757.1 331697518 10365570 complement(3990069..3990959) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: xau:Xaut_1619 inner-membrane translocator; ABC transporter permease 3990959 10365570 Psed_3734 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333757.1 3990069 R 675635 CDS YP_004333758.1 331697519 10365571 3991357..3992121 1 NC_015312.1 KEGG: gob:Gobs_5039 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 3992121 10365571 Psed_3735 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333758.1 3991357 D 675635 CDS YP_004333759.1 331697520 10365572 3992156..3993214 1 NC_015312.1 KEGG: dal:Dalk_4047 propanoyl-CoA C-acyltransferase; hypothetical protein 3993214 10365572 Psed_3736 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333759.1 3992156 D 675635 CDS YP_004333760.1 331697521 10365573 3993211..3994404 1 NC_015312.1 KEGG: bxe:Bxe_A2763 SCP-x_thiolase/acetyl-CoA acetyltransferase, PaaJ-like; propanoyl-CoA C-acyltransferase 3994404 10365573 Psed_3737 Pseudonocardia dioxanivorans CB1190 propanoyl-CoA C-acyltransferase YP_004333760.1 3993211 D 675635 CDS YP_004333761.1 331697522 10365574 3994428..3994889 1 NC_015312.1 PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: bxe:Bxe_A2762 hypothetical protein; hypothetical protein 3994889 10365574 Psed_3738 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333761.1 3994428 D 675635 CDS YP_004333762.1 331697523 10365575 3994910..3995935 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: mxa:MXAN_4266 zinc-binding dehydrogenase oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 3995935 10365575 Psed_3739 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004333762.1 3994910 D 675635 CDS YP_004333763.1 331697524 10365576 3995932..3997593 1 NC_015312.1 KEGG: bxe:Bxe_C0355 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 3997593 10365576 Psed_3740 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004333763.1 3995932 D 675635 CDS YP_004333764.1 331697525 10365577 3997590..3998510 1 NC_015312.1 PFAM: cyclase; KEGG: swi:Swit_2102 cyclase protein; cyclase 3998510 10365577 Psed_3741 Pseudonocardia dioxanivorans CB1190 cyclase YP_004333764.1 3997590 D 675635 CDS YP_004333765.1 331697526 10365578 complement(3998507..3999688) 1 NC_015312.1 KEGG: ami:Amir_5665 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase 3999688 10365578 Psed_3742 Pseudonocardia dioxanivorans CB1190 alpha-methylacyl-CoA racemase YP_004333765.1 3998507 R 675635 CDS YP_004333766.1 331697527 10365579 complement(3999685..4000578) 1 NC_015312.1 KEGG: dac:Daci_2567 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 4000578 10365579 Psed_3743 Pseudonocardia dioxanivorans CB1190 3-hydroxyisobutyrate dehydrogenase YP_004333766.1 3999685 R 675635 CDS YP_004333767.1 331697528 10365580 complement(4000571..4001011) 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: slo:Shew_2734 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 4001011 10365580 Psed_3744 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004333767.1 4000571 R 675635 CDS YP_004333768.1 331697529 10365581 complement(4001008..4001400) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: mrd:Mrad2831_3249 cupin 2 domain-containing protein; cupin 4001400 10365581 Psed_3745 Pseudonocardia dioxanivorans CB1190 cupin YP_004333768.1 4001008 R 675635 CDS YP_004333769.1 331697530 10365582 complement(4001502..4002257) 1 NC_015312.1 KEGG: rha:RHA1_ro02613 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4002257 10365582 Psed_3746 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333769.1 4001502 R 675635 CDS YP_004333770.1 331697531 10365583 complement(4002254..4003804) 1 NC_015312.1 PFAM: Amino acid permease domain; KEGG: xce:Xcel_3068 amino acid permease-associated region; amino acid permease 4003804 10365583 Psed_3747 Pseudonocardia dioxanivorans CB1190 amino acid permease YP_004333770.1 4002254 R 675635 CDS YP_004333771.1 331697532 10365584 4004153..4005616 1 NC_015312.1 PFAM: Amino acid permease domain; KEGG: rha:RHA1_ro02609 amino acid transporter; amino acid permease 4005616 10365584 Psed_3748 Pseudonocardia dioxanivorans CB1190 amino acid permease YP_004333771.1 4004153 D 675635 CDS YP_004333772.1 331697533 10365585 4005646..4007547 1 NC_015312.1 PFAM: Copper amine oxidase, C-terminal; Copper amine oxidase, N3-terminal; Copper amine oxidase, N2-terminal; KEGG: gob:Gobs_1923 primary-amine oxidase; Copper amine oxidase domain-containing protein 4007547 10365585 Psed_3749 Pseudonocardia dioxanivorans CB1190 Copper amine oxidase domain-containing protein YP_004333772.1 4005646 D 675635 CDS YP_004333773.1 331697534 10365586 4007645..4008154 1 NC_015312.1 KEGG: mkm:Mkms_2739 hypothetical protein; hypothetical protein 4008154 10365586 Psed_3750 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333773.1 4007645 D 675635 CDS YP_004333774.1 331697535 10365587 complement(4008229..4008462) 1 NC_015312.1 hypothetical protein 4008462 10365587 Psed_3751 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333774.1 4008229 R 675635 CDS YP_004333775.1 331697536 10365588 complement(4008619..4010076) 1 NC_015312.1 KEGG: swi:Swit_0904 UbiD family decarboxylase; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; UbiD family decarboxylase 4010076 10365588 Psed_3752 Pseudonocardia dioxanivorans CB1190 UbiD family decarboxylase YP_004333775.1 4008619 R 675635 CDS YP_004333776.1 331697537 10365589 complement(4010076..4010852) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: met:M446_4655 3-oxoadipate enol-lactonase; alpha/beta hydrolase 4010852 10365589 Psed_3753 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004333776.1 4010076 R 675635 CDS YP_004333777.1 331697538 10365590 complement(4010849..4011334) 1 NC_015312.1 PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: tro:trd_A0068 aldehyde dehydrogenase subunit III; (2Fe-2S)-binding protein 4011334 10365590 Psed_3754 Pseudonocardia dioxanivorans CB1190 (2Fe-2S)-binding protein YP_004333777.1 4010849 R 675635 CDS YP_004333778.1 331697539 10365591 complement(4011331..4013703) 1 NC_015312.1 KEGG: tro:trd_A0069 probable xanthine dehydrogenase subunit D (XDHase subunit D); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase 4013703 10365591 Psed_3755 Pseudonocardia dioxanivorans CB1190 xanthine dehydrogenase YP_004333778.1 4011331 R 675635 CDS YP_004333779.1 331697540 10365592 complement(4013660..4014580) 1 NC_015312.1 PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: tbi:Tbis_2230 molybdopterin dehydrogenase FAD-binding protein; molybdopterin dehydrogenase FAD-binding protein 4014580 10365592 Psed_3756 Pseudonocardia dioxanivorans CB1190 molybdopterin dehydrogenase FAD-binding protein YP_004333779.1 4013660 R 675635 CDS YP_004333780.1 331697541 10365593 complement(4014577..4015497) 1 NC_015312.1 PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: rsq:Rsph17025_1141 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 4015497 10365593 Psed_3757 Pseudonocardia dioxanivorans CB1190 carbon monoxide dehydrogenase subunit G YP_004333780.1 4014577 R 675635 CDS YP_004333781.1 331697542 10365594 4015653..4016423 1 NC_015312.1 KEGG: scb:SCAB_81001 repressor of aceBA operon; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4016423 10365594 Psed_3758 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333781.1 4015653 D 675635 CDS YP_004333782.1 331697543 10365595 4016637..4018037 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: acr:Acry_0452 major facilitator transporter; major facilitator superfamily protein 4018037 10365595 Psed_3759 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333782.1 4016637 D 675635 CDS YP_004333783.1 331697544 10365596 4018410..4019729 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: vdi:Vdis_1658 major facilitator superfamily protein; major facilitator superfamily protein 4019729 10365596 Psed_3760 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333783.1 4018410 D 675635 CDS YP_004333784.1 331697545 10365597 4019787..4021409 1 NC_015312.1 KEGG: fal:FRAAL2367 glutamate synthase(ferredoxin); PFAM: Glutamate synthase, central-C; glutamate synthase 4021409 10365597 Psed_3761 Pseudonocardia dioxanivorans CB1190 glutamate synthase YP_004333784.1 4019787 D 675635 CDS YP_004333785.1 331697546 10365598 4021476..4022972 1 NC_015312.1 TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: ace:Acel_1799 methylmalonate-semialdehyde dehydrogenase (acylating); PFAM: Aldehyde dehydrogenase domain; methylmalonate-semialdehyde dehydrogenase 4022972 10365598 Psed_3762 Pseudonocardia dioxanivorans CB1190 methylmalonate-semialdehyde dehydrogenase YP_004333785.1 4021476 D 675635 CDS YP_004333786.1 331697547 10365599 complement(4023370..4024206) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_4864 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4024206 10365599 Psed_3763 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004333786.1 4023370 R 675635 CDS YP_004333787.1 331697548 10365600 complement(4024209..4025123) 1 NC_015312.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: aau:AAur_0255 3-hydroxybutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 4025123 10365600 Psed_3764 Pseudonocardia dioxanivorans CB1190 6-phosphogluconate dehydrogenase YP_004333787.1 4024209 R 675635 CDS YP_004333788.1 331697549 10365601 complement(4025120..4026589) 1 NC_015312.1 PFAM: Protein of unknown function, DUF1537; KEGG: cdi:DIP2080 hypothetical protein; Hrp-dependent type III effector-domain-containing protein 4026589 10365601 Psed_3765 Pseudonocardia dioxanivorans CB1190 Hrp-dependent type III effector-domain-containing protein YP_004333788.1 4025120 R 675635 CDS YP_004333789.1 331697550 10365602 complement(4026586..4027287) 1 NC_015312.1 KEGG: aau:AAur_0252 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4027287 10365602 Psed_3766 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333789.1 4026586 R 675635 CDS YP_004333790.1 331697551 10365603 complement(4027362..4028321) 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bmj:BMULJ_05022 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 4028321 10365603 Psed_3767 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004333790.1 4027362 R 675635 CDS YP_004333791.1 331697552 10365604 4028489..4030801 1 NC_015312.1 KEGG: sma:SAV_50 hypothetical protein; hypothetical protein 4030801 10365604 Psed_3768 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333791.1 4028489 D 675635 CDS YP_004333792.1 331697553 10365605 complement(4030747..4031664) 1 NC_015312.1 KEGG: bpf:BpOF4_19035 hypothetical protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 4031664 10365605 Psed_3769 Pseudonocardia dioxanivorans CB1190 cation diffusion facilitator family transporter YP_004333792.1 4030747 R 675635 CDS YP_004333793.1 331697554 10365606 complement(4031661..4031957) 1 NC_015312.1 PFAM: YCII-related; KEGG: gob:Gobs_1899 YCII-like protein; hypothetical protein 4031957 10365606 Psed_3770 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333793.1 4031661 R 675635 CDS YP_004333794.1 331697555 10365607 complement(4031954..4032397) 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: rdn:HMPREF0733_11511 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 4032397 10365607 Psed_3771 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004333794.1 4031954 R 675635 CDS YP_004333795.1 331697556 10365608 complement(4032390..4032716) 1 NC_015312.1 KEGG: rha:RHA1_ro05363 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 4032716 10365608 Psed_3772 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004333795.1 4032390 R 675635 CDS YP_004333796.1 331697557 10365609 complement(4032737..4033069) 1 NC_015312.1 hypothetical protein 4033069 10365609 Psed_3773 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333796.1 4032737 R 675635 CDS YP_004333797.1 331697558 10365610 complement(4033184..4034401) 1 NC_015312.1 KEGG: amd:AMED_8897 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4034401 10365610 Psed_3774 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004333797.1 4033184 R 675635 CDS YP_004333798.1 331697559 10365611 complement(4034398..4034784) 1 NC_015312.1 PFAM: YCII-related; KEGG: kfl:Kfla_3164 YCII-related protein; hypothetical protein 4034784 10365611 Psed_3775 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333798.1 4034398 R 675635 CDS YP_004333799.1 331697560 10365612 4034916..4035437 1 NC_015312.1 KEGG: amd:AMED_8895 ketosteroid isomerase-like protein; hypothetical protein 4035437 10365612 Psed_3776 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333799.1 4034916 D 675635 CDS YP_004333800.1 331697561 10365613 4035483..4035869 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cwo:Cwoe_0347 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4035869 10365613 Psed_3777 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333800.1 4035483 D 675635 CDS YP_004333801.1 331697562 10365614 4035915..4037114 1 NC_015312.1 HAMAP: DNA polymerase IV; KEGG: rop:ROP_10970 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV 4037114 10365614 Psed_3778 Pseudonocardia dioxanivorans CB1190 DNA polymerase IV YP_004333801.1 4035915 D 675635 CDS YP_004333802.1 331697563 10365615 4037171..4037791 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: fre:Franean1_3145 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 4037791 10365615 Psed_3779 Pseudonocardia dioxanivorans CB1190 PadR-like family transcriptional regulator YP_004333802.1 4037171 D 675635 CDS YP_004333803.1 331697564 10365616 4037881..4038138 1 NC_015312.1 KEGG: pfh:PFHG_01077 conserved hypothetical protein; hypothetical protein 4038138 10365616 Psed_3780 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333803.1 4037881 D 675635 CDS YP_004333804.1 331697565 10365617 complement(4038206..4039483) 1 NC_015312.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 4039483 10365617 Psed_3781 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004333804.1 4038206 R 675635 CDS YP_004333805.1 331697566 10365618 complement(4039614..4041230) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sti:Sthe_0680 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 4041230 10365618 Psed_3782 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333805.1 4039614 R 675635 CDS YP_004333806.1 331697567 10365619 complement(4041752..4042039) 1 NC_015312.1 hypothetical protein 4042039 10365619 Psed_3783 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333806.1 4041752 R 675635 CDS YP_004333807.1 331697568 10365620 complement(4042194..4044236) 1 NC_015312.1 KEGG: msp:Mspyr1_20770 NAD+ synthetase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD(+) synthase 4044236 10365620 Psed_3784 Pseudonocardia dioxanivorans CB1190 NAD(+) synthase YP_004333807.1 4042194 R 675635 CDS YP_004333808.1 331697569 10365621 4044357..4044980 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0126; KEGG: nml:Namu_1723 hypothetical protein; hypothetical protein 4044980 10365621 Psed_3785 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333808.1 4044357 D 675635 CDS YP_004333809.1 331697570 10365622 complement(4044996..4045850) 1 NC_015312.1 KEGG: svi:Svir_17480 predicted signal-transduction protein containing cAMP-binding and CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein 4045850 10365622 Psed_3786 Pseudonocardia dioxanivorans CB1190 CBS domain-containing protein YP_004333809.1 4044996 R 675635 CDS YP_004333810.1 331697571 10365623 complement(4045957..4046895) 1 NC_015312.1 PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: met:M446_1737 hypothetical protein; hypothetical protein 4046895 10365623 Psed_3787 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333810.1 4045957 R 675635 CDS YP_004333811.1 331697572 10365624 4047045..4048265 1 NC_015312.1 KEGG: gob:Gobs_2385 cytochrome P450; PFAM: Cytochrome P450; peroxidase 4048265 10365624 Psed_3788 Pseudonocardia dioxanivorans CB1190 peroxidase YP_004333811.1 4047045 D 675635 CDS YP_004333812.1 331697573 10365625 complement(4048288..4049484) 1 NC_015312.1 PFAM: Metallo-dependent phosphatase; KEGG: mva:Mvan_5813 metallophosphoesterase; metallophosphoesterase 4049484 10365625 Psed_3789 Pseudonocardia dioxanivorans CB1190 metallophosphoesterase YP_004333812.1 4048288 R 675635 CDS YP_004333813.1 331697574 10365626 4049623..4051047 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: nml:Namu_0526 luciferase-like monooxygenase; luciferase-like protein 4051047 10365626 Psed_3790 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004333813.1 4049623 D 675635 CDS YP_004333814.1 331697575 10365627 4051146..4051610 1 NC_015312.1 KEGG: gob:Gobs_4432 hypothetical protein; hypothetical protein 4051610 10365627 Psed_3791 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333814.1 4051146 D 675635 CDS YP_004333815.1 331697576 10365628 4051630..4052949 1 NC_015312.1 PFAM: Amino acid permease domain; KEGG: rer:RER_43210 amino acid transporter; amino acid permease 4052949 10365628 Psed_3792 Pseudonocardia dioxanivorans CB1190 amino acid permease YP_004333815.1 4051630 D 675635 CDS YP_004333816.1 331697577 10365629 4052963..4053997 1 NC_015312.1 KEGG: req:REQ_07080 hydrolase/LuxR domain protein; PFAM: Transcription regulator LuxR, C-terminal; Alpha/beta hydrolase fold-1; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4053997 10365629 Psed_3793 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004333816.1 4052963 D 675635 CDS YP_004333817.1 331697578 10365630 4054148..4054771 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: req:REQ_07070 sam dependent methyltransferase; type 11 methyltransferase 4054771 10365630 Psed_3794 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004333817.1 4054148 D 675635 CDS YP_004333818.1 331697579 10365631 4054863..4055417 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: mkm:Mkms_1622 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 4055417 10365631 Psed_3795 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004333818.1 4054863 D 675635 CDS YP_004333819.1 331697580 10365632 complement(4055349..4056158) 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: nca:Noca_4912 helix-turn-helix, HxlR type; HxlR family transcriptional regulator 4056158 10365632 Psed_3796 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004333819.1 4055349 R 675635 CDS YP_004333820.1 331697581 10365633 4056226..4057038 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: nca:Noca_4919 methyltransferase type 11; type 11 methyltransferase 4057038 10365633 Psed_3797 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004333820.1 4056226 D 675635 CDS YP_004333821.1 331697582 10365635 complement(4057405..4058469) 1 NC_015312.1 KEGG: mjl:Mjls_0026 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; homoserine O-acetyltransferase 4058469 10365635 Psed_3798 Pseudonocardia dioxanivorans CB1190 homoserine O-acetyltransferase YP_004333821.1 4057405 R 675635 CDS YP_004333822.1 331697583 10365636 complement(4058466..4059713) 1 NC_015312.1 KEGG: sen:SACE_1932 formamidase; PFAM: Acetamidase/Formamidase; formamidase 4059713 10365636 Psed_3799 Pseudonocardia dioxanivorans CB1190 formamidase YP_004333822.1 4058466 R 675635 CDS YP_004333823.1 331697584 10365637 complement(4059798..4060082) 1 NC_015312.1 TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: krh:KRH_22990 regulatory protein; SMART: Regulatory protein, FmdB; FmdB family regulatory protein 4060082 10365637 Psed_3800 Pseudonocardia dioxanivorans CB1190 FmdB family regulatory protein YP_004333823.1 4059798 R 675635 CDS YP_004333824.1 331697585 10365638 complement(4060150..4061235) 1 NC_015312.1 KEGG: sma:SAV_1189 regulatory protein; regulatory protein 4061235 10365638 Psed_3801 Pseudonocardia dioxanivorans CB1190 regulatory protein YP_004333824.1 4060150 R 675635 CDS YP_004333825.1 331697586 10365639 4061440..4061868 1 NC_015312.1 KEGG: cai:Caci_6436 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4061868 10365639 Psed_3802 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004333825.1 4061440 D 675635 CDS YP_004333826.1 331697587 10365640 complement(4061878..4063338) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; KEGG: ami:Amir_1616 GTP-binding protein EngA; HAMAP: GTP-binding, EngA; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engA 4063338 10365640 Psed_3803 Pseudonocardia dioxanivorans CB1190 GTP-binding protein engA YP_004333826.1 4061878 R 675635 CDS YP_004333827.1 331697588 10365641 complement(4063335..4064000) 1 NC_015312.1 KEGG: sen:SACE_5233 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4064000 10365641 Psed_3804 Pseudonocardia dioxanivorans CB1190 phospholipid/glycerol acyltransferase YP_004333827.1 4063335 R 675635 CDS YP_004333828.1 331697589 10365642 complement(4063997..4064707) 1 NC_015312.1 PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: sen:SACE_5234 cytidylate kinase; cytidylate kinase 4064707 10365642 Psed_3805 Pseudonocardia dioxanivorans CB1190 cytidylate kinase YP_004333828.1 4063997 R 675635 CDS YP_004333829.1 331697590 10365643 complement(4064898..4065260) 1 NC_015312.1 KEGG: nda:Ndas_0977 chorismate mutase; TIGRFAM: Chorismate mutase, AroH class; PFAM: Chorismate mutase, AroH class; chorismate mutase 4065260 10365643 Psed_3806 Pseudonocardia dioxanivorans CB1190 chorismate mutase YP_004333829.1 4064898 R 675635 CDS YP_004333830.1 331697591 10365644 complement(4065297..4066055) 1 NC_015312.1 TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: svi:Svir_25330 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; pseudouridine synthase 4066055 10365644 Psed_3807 Pseudonocardia dioxanivorans CB1190 pseudouridine synthase YP_004333830.1 4065297 R 675635 CDS YP_004333831.1 331697592 10365645 complement(4066120..4066896) 1 NC_015312.1 KEGG: sen:SACE_5238 segregation and condensation protein B; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 4066896 10365645 Psed_3808 Pseudonocardia dioxanivorans CB1190 chromosome segregation and condensation protein ScpB YP_004333831.1 4066120 R 675635 CDS YP_004333832.1 331697593 10365646 complement(4066893..4067741) 1 NC_015312.1 PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: ami:Amir_5427 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 4067741 10365646 Psed_3809 Pseudonocardia dioxanivorans CB1190 chromosome segregation and condensation protein ScpA YP_004333832.1 4066893 R 675635 CDS YP_004333833.1 331697594 10365647 complement(4067738..4068673) 1 NC_015312.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sen:SACE_5241 chromosome partitioning protein (partial match); Cobyrinic acid ac-diamide synthase 4068673 10365647 Psed_3810 Pseudonocardia dioxanivorans CB1190 Cobyrinic acid ac-diamide synthase YP_004333833.1 4067738 R 675635 CDS YP_004333834.1 331697595 10365648 complement(4068845..4069612) 1 NC_015312.1 KEGG: cwo:Cwoe_0260 hypothetical protein; hypothetical protein 4069612 10365648 Psed_3811 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333834.1 4068845 R 675635 CDS YP_004333835.1 331697596 10365649 complement(4069635..4070558) 1 NC_015312.1 TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; Tyrosine recombinase XerD; KEGG: msm:MSMEG_3744 site-specific tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC 4070558 10365649 Psed_3812 Pseudonocardia dioxanivorans CB1190 tyrosine recombinase xerC YP_004333835.1 4069635 R 675635 CDS YP_004333836.1 331697597 10365650 complement(4070658..4071653) 1 NC_015312.1 KEGG: req:REQ_23690 fmn-dependent monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 4071653 10365650 Psed_3813 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004333836.1 4070658 R 675635 CDS YP_004333837.1 331697598 10365651 complement(4071862..4072494) 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: rop:ROP_06630 ADP-ribose pyrophosphatase; NUDIX hydrolase 4072494 10365651 Psed_3814 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004333837.1 4071862 R 675635 CDS YP_004333838.1 331697599 10365652 complement(4072491..4074257) 1 NC_015312.1 PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: sen:SACE_5244 CTP synthetase; CTP synthase 4074257 10365652 Psed_3815 Pseudonocardia dioxanivorans CB1190 CTP synthase YP_004333838.1 4072491 R 675635 CDS YP_004333839.1 331697600 10365653 complement(4074410..4075330) 1 NC_015312.1 KEGG: amd:AMED_6021 hypothetical protein; hypothetical protein 4075330 10365653 Psed_3816 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333839.1 4074410 R 675635 CDS YP_004333840.1 331697601 10365654 complement(4075327..4076511) 1 NC_015312.1 KEGG: amd:AMED_6022 hypothetical protein; hypothetical protein 4076511 10365654 Psed_3817 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333840.1 4075327 R 675635 CDS YP_004333841.1 331697602 10365655 complement(4076653..4078497) 1 NC_015312.1 KEGG: ami:Amir_5439 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC; DNA repair protein RecN 4078497 10365655 Psed_3818 Pseudonocardia dioxanivorans CB1190 DNA repair protein RecN YP_004333841.1 4076653 R 675635 CDS YP_004333842.1 331697603 10365656 complement(4078531..4079478) 1 NC_015312.1 KEGG: tcu:Tcur_2170 ATP-NAD/AcoX kinase; HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted; PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; inorganic polyphosphate/ATP-NAD kinase 4079478 10365656 Psed_3819 Pseudonocardia dioxanivorans CB1190 inorganic polyphosphate/ATP-NAD kinase YP_004333842.1 4078531 R 675635 CDS YP_004333843.1 331697604 10365657 complement(4079475..4080275) 1 NC_015312.1 TIGRFAM: Haemolysin A; PFAM: RNA-binding S4; Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: gbr:Gbro_2828 hemolysin A; SMART: RNA-binding S4; hemolysin A 4080275 10365657 Psed_3820 Pseudonocardia dioxanivorans CB1190 hemolysin A YP_004333843.1 4079475 R 675635 CDS YP_004333844.1 331697605 10365658 complement(4080281..4080547) 1 NC_015312.1 hypothetical protein 4080547 10365658 Psed_3821 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333844.1 4080281 R 675635 CDS YP_004333845.1 331697606 10365659 complement(4080648..4081706) 1 NC_015312.1 KEGG: sen:SACE_5252 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 4081706 10365659 Psed_3822 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004333845.1 4080648 R 675635 CDS YP_004333846.1 331697607 10365660 complement(4081703..4082707) 1 NC_015312.1 KEGG: sen:SACE_5253 hypothetical protein; hypothetical protein 4082707 10365660 Psed_3823 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333846.1 4081703 R 675635 CDS YP_004333847.1 331697608 10365661 complement(4083283..4084539) 1 NC_015312.1 KEGG: bfo:BRAFLDRAFT_89036 hypothetical protein; hypothetical protein 4084539 10365661 Psed_3824 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333847.1 4083283 R 675635 CDS YP_004333848.1 331697609 10365666 complement(4091636..4092259) 1 NC_015312.1 TIGRFAM: Methylpurine-DNA glycosylase (MPG); HAMAP: Methylpurine-DNA glycosylase (MPG); KEGG: amd:AMED_6033 DNA-3-methyladenine glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG); 3-methyladenine DNA glycosylase 4092259 10365666 Psed_3826 Pseudonocardia dioxanivorans CB1190 3-methyladenine DNA glycosylase YP_004333848.1 4091636 R 675635 CDS YP_004333849.1 331697610 10365667 4092333..4093142 1 NC_015312.1 KEGG: bcm:Bcenmc03_1755 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 4093142 10365667 Psed_3827 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004333849.1 4092333 D 675635 CDS YP_004333850.1 331697611 10365668 4093139..4093324 1 NC_015312.1 hypothetical protein 4093324 10365668 Psed_3828 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333850.1 4093139 D 675635 CDS YP_004333851.1 331697612 10365669 complement(4093372..4094763) 1 NC_015312.1 PFAM: Lyase 1, N-terminal; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: rha:RHA1_ro00949 argininosuccinate lyase; argininosuccinate lyase 4094763 10365669 Psed_3829 Pseudonocardia dioxanivorans CB1190 argininosuccinate lyase YP_004333851.1 4093372 R 675635 CDS YP_004333852.1 331697613 10365670 complement(4094763..4096196) 1 NC_015312.1 PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: nca:Noca_2474 argininosuccinate synthase; argininosuccinate synthase 4096196 10365670 Psed_3830 Pseudonocardia dioxanivorans CB1190 argininosuccinate synthase YP_004333852.1 4094763 R 675635 CDS YP_004333853.1 331697614 10365671 complement(4096222..4096710) 1 NC_015312.1 TIGRFAM: Arginine repressor; HAMAP: Arginine repressor; KEGG: mab:MAB_2341 arginine repressor ArgR; PFAM: Arginine repressor, DNA-binding domain; Arginine repressor, C-terminal; arginine repressor ArgR 4096710 10365671 Psed_3831 Pseudonocardia dioxanivorans CB1190 arginine repressor ArgR YP_004333853.1 4096222 R 675635 CDS YP_004333854.1 331697615 10365672 complement(4096707..4097651) 1 NC_015312.1 PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: mkm:Mkms_3012 ornithine carbamoyltransferase; ornithine carbamoyltransferase 4097651 10365672 Psed_3832 Pseudonocardia dioxanivorans CB1190 ornithine carbamoyltransferase YP_004333854.1 4096707 R 675635 CDS YP_004333855.1 331697616 10365673 complement(4097648..4098838) 1 NC_015312.1 PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: rop:ROP_06840 acetylornithine aminotransferase; acetylornithine/succinyldiaminopimelate aminotransferase 4098838 10365673 Psed_3833 Pseudonocardia dioxanivorans CB1190 acetylornithine/succinyldiaminopimelate aminotransferase YP_004333855.1 4097648 R 675635 CDS YP_004333856.1 331697617 10365674 complement(4098835..4099740) 1 NC_015312.1 TIGRFAM: Acetylglutamate kinase; KEGG: sen:SACE_5260 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase 4099740 10365674 Psed_3834 Pseudonocardia dioxanivorans CB1190 acetylglutamate kinase YP_004333856.1 4098835 R 675635 CDS YP_004333857.1 331697618 10365675 complement(4099724..4100884) 1 NC_015312.1 PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: sen:SACE_5261 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; arginine biosynthesis bifunctional protein ArgJ 4100884 10365675 Psed_3835 Pseudonocardia dioxanivorans CB1190 arginine biosynthesis bifunctional protein ArgJ YP_004333857.1 4099724 R 675635 CDS YP_004333858.1 331697619 10365676 complement(4100913..4101956) 1 NC_015312.1 KEGG: ami:Amir_5456 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; SMART: Semialdehyde dehydrogenase, NAD-binding; N-acetyl-gamma-glutamyl-phosphate reductase 4101956 10365676 Psed_3836 Pseudonocardia dioxanivorans CB1190 N-acetyl-gamma-glutamyl-phosphate reductase YP_004333858.1 4100913 R 675635 CDS YP_004333859.1 331697620 10365677 4101981..4102775 1 NC_015312.1 PFAM: DNA alkylation repair enzyme; KEGG: amd:AMED_6049 DNA alkylation repair enzyme; DNA alkylation repair protein 4102775 10365677 Psed_3837 Pseudonocardia dioxanivorans CB1190 DNA alkylation repair protein YP_004333859.1 4101981 D 675635 CDS YP_004333860.1 331697621 10365678 complement(4102895..4105435) 1 NC_015312.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: amd:AMED_6050 phenylalanyl-tRNA synthetase beta chain; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; Phenylalanyl-tRNA synthetase subunit beta 4105435 10365678 Psed_3838 Pseudonocardia dioxanivorans CB1190 Phenylalanyl-tRNA synthetase subunit beta YP_004333860.1 4102895 R 675635 CDS YP_004333861.1 331697622 10365679 complement(4105480..4106580) 1 NC_015312.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 1, bacterial; KEGG: ami:Amir_5465 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal; Phenylalanyl-tRNA synthetase subunit alpha 4106580 10365679 Psed_3839 Pseudonocardia dioxanivorans CB1190 Phenylalanyl-tRNA synthetase subunit alpha YP_004333861.1 4105480 R 675635 CDS YP_004333862.1 331697623 10365680 complement(4106617..4107456) 1 NC_015312.1 KEGG: ami:Amir_5470 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU 4107456 10365680 Psed_3840 Pseudonocardia dioxanivorans CB1190 tRNA/rRNA methyltransferase SpoU YP_004333862.1 4106617 R 675635 CDS YP_004333863.1 331697624 10365681 complement(4107465..4107851) 1 NC_015312.1 TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: fri:FraEuI1c_1703 ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 4107851 10365681 Psed_3841 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L20 YP_004333863.1 4107465 R 675635 CDS YP_004333864.1 331697625 10365682 complement(4107932..4108126) 1 NC_015312.1 TIGRFAM: Ribosomal protein L35, non-mitochondrial; HAMAP: Ribosomal protein L35, non-mitochondrial; KEGG: svi:Svir_25680 50S ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 4108126 10365682 Psed_3842 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L35 YP_004333864.1 4107932 R 675635 CDS YP_004333865.1 331697626 10365683 complement(4108197..4108949) 1 NC_015312.1 TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor 3; KEGG: ami:Amir_5473 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; translation initiation factor IF-3 4108949 10365683 Psed_3843 Pseudonocardia dioxanivorans CB1190 translation initiation factor IF-3 YP_004333865.1 4108197 R 675635 CDS YP_004333866.1 331697627 10365685 complement(4109543..4112455) 1 NC_015312.1 TIGRFAM: Excinuclease ABC, A subunit; HAMAP: Excinuclease ABC, A subunit; KEGG: nfa:nfa19110 excinuclease ABC subunit A; PFAM: ABC transporter-like; UvrABC system protein A 4112455 10365685 Psed_3845 Pseudonocardia dioxanivorans CB1190 UvrABC system protein A YP_004333866.1 4109543 R 675635 CDS YP_004333867.1 331697628 10365686 4112932..4113606 1 NC_015312.1 KEGG: svi:Svir_25780 Zn-dependent hydrolase, glyoxylase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4113606 10365686 Psed_3846 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004333867.1 4112932 D 675635 CDS YP_004333868.1 331697629 10365687 4113701..4114192 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: rha:RHA1_ro04095 hypothetical protein; polyketide cyclase/dehydrase 4114192 10365687 Psed_3847 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004333868.1 4113701 D 675635 CDS YP_004333869.1 331697630 10365688 4114637..4115920 1 NC_015312.1 KEGG: amd:AMED_6371 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 4115920 10365688 Psed_3848 Pseudonocardia dioxanivorans CB1190 cell envelope-related transcriptional attenuator YP_004333869.1 4114637 D 675635 CDS YP_004333870.1 331697631 10365689 complement(4115959..4116141) 1 NC_015312.1 hypothetical protein 4116141 10365689 Psed_3849 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333870.1 4115959 R 675635 CDS YP_004333871.1 331697632 10365690 4116306..4118411 1 NC_015312.1 KEGG: tbi:Tbis_3037 peptidase S9B dipeptidylpeptidase IV domain-containing protein; peptidase S9B dipeptidylpeptidase IV domain-containing protein 4118411 10365690 Psed_3850 Pseudonocardia dioxanivorans CB1190 peptidase S9B dipeptidylpeptidase IV domain-containing protein YP_004333871.1 4116306 D 675635 CDS YP_004333872.1 331697633 10365691 complement(4118413..4119891) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_2551 major facilitator superfamily MFS_1; major facilitator superfamily protein 4119891 10365691 Psed_3851 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333872.1 4118413 R 675635 CDS YP_004333873.1 331697634 10365692 4119990..4120394 1 NC_015312.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: ami:Amir_5503 peptidylprolyl isomerase FKBP-type; FKBP-type peptidylprolyl isomerase 4120394 10365692 Psed_3852 Pseudonocardia dioxanivorans CB1190 FKBP-type peptidylprolyl isomerase YP_004333873.1 4119990 D 675635 CDS YP_004333874.1 331697635 10365693 4120409..4120927 1 NC_015312.1 manually curated; TIGRFAM: Phosphodiesterase MJ0936; KEGG: sen:SACE_5374 phosphoesterase; PFAM: Metallo-dependent phosphatase; phosphodiesterase 4120927 10365693 Psed_3853 Pseudonocardia dioxanivorans CB1190 phosphodiesterase YP_004333874.1 4120409 D 675635 CDS YP_004333875.1 331697636 10365694 4121005..4121295 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mil:ML5_3936 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4121295 10365694 Psed_3854 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004333875.1 4121005 D 675635 CDS YP_004333876.1 331697637 10365695 4121429..4124332 1 NC_015312.1 PFAM: ABC transporter-like; Dienelactone hydrolase; KEGG: amd:AMED_6109 ABC transport system ATP-binding protein fused with dipeptidyl-peptidase; SMART: ATPase, AAA+ type, core; Peptidase S15/CocE/NonD, C-terminal; sulfate-transporting ATPase 4124332 10365695 Psed_3855 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004333876.1 4121429 D 675635 CDS YP_004333877.1 331697638 10365696 4124329..4125360 1 NC_015312.1 KEGG: ami:Amir_5515 hypothetical protein; hypothetical protein 4125360 10365696 Psed_3856 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333877.1 4124329 D 675635 CDS YP_004333878.1 331697639 10365697 4125497..4125949 1 NC_015312.1 KEGG: amd:AMED_0033 hypothetical protein; hypothetical protein 4125949 10365697 Psed_3857 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333878.1 4125497 D 675635 CDS YP_004333879.1 331697640 10365698 complement(4126099..4127022) 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: amd:AMED_8893 drug/metabolite transporter, DME family; hypothetical protein 4127022 10365698 Psed_3858 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333879.1 4126099 R 675635 CDS YP_004333880.1 331697641 10365699 4127094..4128008 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: sen:SACE_0264 LysR family transcriptional regulator; LysR family transcriptional regulator 4128008 10365699 Psed_3859 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004333880.1 4127094 D 675635 CDS YP_004333881.1 331697642 10365700 complement(4128081..4128659) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_4764 transcriptional regulator, TetR family; TetR family transcriptional regulator 4128659 10365700 Psed_3860 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333881.1 4128081 R 675635 CDS YP_004333882.1 331697643 10365701 4128747..4129190 1 NC_015312.1 KEGG: mau:Micau_0827 DoxX family protein; DoxX family protein 4129190 10365701 Psed_3861 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004333882.1 4128747 D 675635 CDS YP_004333883.1 331697644 10365702 4129403..4129795 1 NC_015312.1 KEGG: sma:SAV_7325 hypothetical protein; hypothetical protein 4129795 10365702 Psed_3862 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333883.1 4129403 D 675635 CDS YP_004333884.1 331697645 10365703 complement(4129807..4130229) 1 NC_015312.1 KEGG: gbr:Gbro_2704 hypothetical protein; hypothetical protein 4130229 10365703 Psed_3863 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333884.1 4129807 R 675635 CDS YP_004333885.1 331697646 10365704 complement(4130316..4130663) 1 NC_015312.1 KEGG: nfa:nfa13740 hypothetical protein; hypothetical protein 4130663 10365704 Psed_3864 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333885.1 4130316 R 675635 CDS YP_004333886.1 331697647 10365705 complement(4130666..4131907) 1 NC_015312.1 PFAM: Protein of unknown function DUF2029; KEGG: nfa:nfa44660 hypothetical protein; hypothetical protein 4131907 10365705 Psed_3865 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333886.1 4130666 R 675635 CDS YP_004333887.1 331697648 10365706 complement(4132054..4134255) 1 NC_015312.1 SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: nfa:nfa19020 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; UvrABC system protein B 4134255 10365706 Psed_3866 Pseudonocardia dioxanivorans CB1190 UvrABC system protein B YP_004333887.1 4132054 R 675635 CDS YP_004333888.1 331697649 10365707 4134337..4134837 1 NC_015312.1 PFAM: Domain of unknown function DUF402; KEGG: svi:Svir_25910 hypothetical protein; hypothetical protein 4134837 10365707 Psed_3867 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333888.1 4134337 D 675635 CDS YP_004333889.1 331697650 10365708 complement(4134846..4135364) 1 NC_015312.1 KEGG: mva:Mvan_0621 hypothetical protein; hypothetical protein 4135364 10365708 Psed_3868 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333889.1 4134846 R 675635 CDS YP_004333890.1 331697651 10365709 complement(4135361..4136242) 1 NC_015312.1 KEGG: cai:Caci_8916 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 4136242 10365709 Psed_3869 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004333890.1 4135361 R 675635 CDS YP_004333891.1 331697652 10365710 complement(4136336..4137241) 1 NC_015312.1 PFAM: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: gbr:Gbro_2870 dephospho-CoA kinase; dephospho-CoA kinase 4137241 10365710 Psed_3870 Pseudonocardia dioxanivorans CB1190 dephospho-CoA kinase YP_004333891.1 4136336 R 675635 CDS YP_004333892.1 331697653 10365711 complement(4137258..4137890) 1 NC_015312.1 KEGG: ami:Amir_5521 hypothetical protein; hypothetical protein 4137890 10365711 Psed_3871 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333892.1 4137258 R 675635 CDS YP_004333893.1 331697654 10365712 complement(4138285..4139748) 1 NC_015312.1 KEGG: sen:SACE_5431 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; RNA binding S1 domain-containing protein 4139748 10365712 Psed_3872 Pseudonocardia dioxanivorans CB1190 RNA binding S1 domain-containing protein YP_004333893.1 4138285 R 675635 CDS YP_004333894.1 331697655 10365713 4140077..4140949 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: ami:Amir_5523 methyltransferase type 11; type 11 methyltransferase 4140949 10365713 Psed_3873 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004333894.1 4140077 D 675635 CDS YP_004333895.1 331697656 10365714 4141315..4141770 1 NC_015312.1 KEGG: ami:Amir_5533 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein 4141770 10365714 Psed_3874 Pseudonocardia dioxanivorans CB1190 phenylacetic acid degradation-like protein YP_004333895.1 4141315 D 675635 CDS YP_004333896.1 331697657 10365715 4141953..4143179 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: nml:Namu_3060 extracellular ligand-binding receptor; ABC transporter substrate-binding protein 4143179 10365715 Psed_3875 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333896.1 4141953 D 675635 CDS YP_004333897.1 331697658 10365716 4143272..4144279 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: mjl:Mjls_3034 inner-membrane translocator; ABC transporter permease 4144279 10365716 Psed_3876 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333897.1 4143272 D 675635 CDS YP_004333898.1 331697659 10365717 4144276..4145445 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: rsa:RSal33209_0250 branched-chain amino acid transport system permease; ABC transporter permease 4145445 10365717 Psed_3877 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004333898.1 4144276 D 675635 CDS YP_004333899.1 331697660 10365718 4145442..4146569 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: nml:Namu_3057 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 4146569 10365718 Psed_3878 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004333899.1 4145442 D 675635 CDS YP_004333900.1 331697661 10365719 4146556..4147269 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: mil:ML5_3917 abc transporter related protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 4147269 10365719 Psed_3879 Pseudonocardia dioxanivorans CB1190 Fe(3+)-transporting ATPase YP_004333900.1 4146556 D 675635 CDS YP_004333901.1 331697662 10365720 complement(4147341..4147970) 1 NC_015312.1 KEGG: amd:AMED_6148 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; ANTAR; SMART: Signal transduction response regulator, receiver domain; response regulator receiver and ANTAR domain-containing protein 4147970 10365720 Psed_3880 Pseudonocardia dioxanivorans CB1190 response regulator receiver and ANTAR domain-containing protein YP_004333901.1 4147341 R 675635 CDS YP_004333902.1 331697663 10365722 4148838..4150103 1 NC_015312.1 PFAM: Domain of unknown function DUF1565; KEGG: scl:sce6360 hypothetical protein; hypothetical protein 4150103 10365722 Psed_3881 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333902.1 4148838 D 675635 CDS YP_004333903.1 331697664 10365723 complement(4150111..4150245) 1 NC_015312.1 hypothetical protein 4150245 10365723 Psed_3882 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333903.1 4150111 R 675635 CDS YP_004333904.1 331697665 10365724 complement(4150242..4151216) 1 NC_015312.1 PFAM: Glycosyl transferase, family 28; KEGG: sen:SACE_6675 UDP-glucose:sterol glucosyltransferase; glycosyl transferase protein 4151216 10365724 Psed_3883 Pseudonocardia dioxanivorans CB1190 glycosyl transferase protein YP_004333904.1 4150242 R 675635 CDS YP_004333905.1 331697666 10365725 4151365..4152027 1 NC_015312.1 KEGG: amd:AMED_4379 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4152027 10365725 Psed_3884 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004333905.1 4151365 D 675635 CDS YP_004333906.1 331697667 10365726 4152225..4154687 1 NC_015312.1 KEGG: sco:SCO1025 integral membrane protein; hypothetical protein 4154687 10365726 Psed_3885 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333906.1 4152225 D 675635 CDS YP_004333907.1 331697668 10365727 4154695..4155081 1 NC_015312.1 KEGG: svi:Svir_16950 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 4155081 10365727 Psed_3886 Pseudonocardia dioxanivorans CB1190 thioredoxin YP_004333907.1 4154695 D 675635 CDS YP_004333908.1 331697669 10365728 complement(4155285..4156109) 1 NC_015312.1 KEGG: tbi:Tbis_2596 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4156109 10365728 Psed_3887 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004333908.1 4155285 R 675635 CDS YP_004333909.1 331697670 10365729 4156450..4157274 1 NC_015312.1 KEGG: kfl:Kfla_2125 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain; Hydroxypyruvate isomerase 4157274 10365729 Psed_3888 Pseudonocardia dioxanivorans CB1190 Hydroxypyruvate isomerase YP_004333909.1 4156450 D 675635 CDS YP_004333910.1 331697671 10365730 4157311..4158201 1 NC_015312.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: amd:AMED_7266 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase 4158201 10365730 Psed_3889 Pseudonocardia dioxanivorans CB1190 2-hydroxy-3-oxopropionate reductase YP_004333910.1 4157311 D 675635 CDS YP_004333911.1 331697672 10365731 4158225..4160018 1 NC_015312.1 TIGRFAM: Glyoxylate carboligase; KEGG: psa:PST_3114 glyoxylate carboligase; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; glyoxylate carboligase 4160018 10365731 Psed_3890 Pseudonocardia dioxanivorans CB1190 glyoxylate carboligase YP_004333911.1 4158225 D 675635 CDS YP_004333912.1 331697673 10365732 4160018..4161151 1 NC_015312.1 TIGRFAM: Glycerate kinase; KEGG: tbi:Tbis_2591 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase 4161151 10365732 Psed_3891 Pseudonocardia dioxanivorans CB1190 glycerate kinase YP_004333912.1 4160018 D 675635 CDS YP_004333913.1 331697674 10365733 complement(4161195..4161980) 1 NC_015312.1 KEGG: saq:Sare_2893 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4161980 10365733 Psed_3892 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333913.1 4161195 R 675635 CDS YP_004333914.1 331697675 10365734 complement(4162046..4164160) 1 NC_015312.1 KEGG: cwo:Cwoe_1171 chorismate binding-like protein; PFAM: Chorismate binding, C-terminal; Aminotransferase, class IV; anthranilate synthase 4164160 10365734 Psed_3893 Pseudonocardia dioxanivorans CB1190 anthranilate synthase YP_004333914.1 4162046 R 675635 CDS YP_004333915.1 331697676 10365735 4164564..4165835 1 NC_015312.1 PFAM: YkuD domain; KEGG: nfa:nfa51960 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 4165835 10365735 Psed_3894 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004333915.1 4164564 D 675635 CDS YP_004333916.1 331697677 10365736 4165904..4166806 1 NC_015312.1 KEGG: amd:AMED_0317 esterase/lipase-like protein; hypothetical protein 4166806 10365736 Psed_3895 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333916.1 4165904 D 675635 CDS YP_004333917.1 331697678 10365737 4166793..4168586 1 NC_015312.1 KEGG: amd:AMED_0275 lysyl-tRNA synthetase; lysyl-tRNA synthetase 4168586 10365737 Psed_3896 Pseudonocardia dioxanivorans CB1190 lysyl-tRNA synthetase YP_004333917.1 4166793 D 675635 CDS YP_004333918.1 331697679 10365738 complement(4168634..4169275) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: kfl:Kfla_6852 transcriptional regulator, TetR family; TetR family transcriptional regulator 4169275 10365738 Psed_3897 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004333918.1 4168634 R 675635 CDS YP_004333919.1 331697680 10365739 4169431..4170222 1 NC_015312.1 KEGG: nml:Namu_4881 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4170222 10365739 Psed_3898 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004333919.1 4169431 D 675635 CDS YP_004333920.1 331697681 10365740 4170233..4171768 1 NC_015312.1 KEGG: rop:ROP_06490 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 4171768 10365740 Psed_3899 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004333920.1 4170233 D 675635 CDS YP_004333921.1 331697682 10365742 complement(4173393..4173857) 1 NC_015312.1 PFAM: Protein of unknown function DUF1232; KEGG: mil:ML5_1161 hypothetical protein; hypothetical protein 4173857 10365742 Psed_3901 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333921.1 4173393 R 675635 CDS YP_004333922.1 331697683 10365743 4174071..4174814 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: fre:Franean1_6014 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 4174814 10365743 Psed_3902 Pseudonocardia dioxanivorans CB1190 PadR-like family transcriptional regulator YP_004333922.1 4174071 D 675635 CDS YP_004333923.1 331697684 10365744 complement(4174886..4175281) 1 NC_015312.1 KEGG: saq:Sare_4881 hypothetical protein; hypothetical protein 4175281 10365744 Psed_3903 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333923.1 4174886 R 675635 CDS YP_004333924.1 331697685 10365745 complement(4175334..4176284) 1 NC_015312.1 KEGG: sro:Sros_9286 CO dehydrogenase maturation factor-like protein; CO dehydrogenase maturation factor-like protein 4176284 10365745 Psed_3904 Pseudonocardia dioxanivorans CB1190 CO dehydrogenase maturation factor-like protein YP_004333924.1 4175334 R 675635 CDS YP_004333925.1 331697686 10365746 4176476..4177390 1 NC_015312.1 PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: nmg:Nmag_1492 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 4177390 10365746 Psed_3905 Pseudonocardia dioxanivorans CB1190 fumarylacetoacetate (FAA) hydrolase YP_004333925.1 4176476 D 675635 CDS YP_004333926.1 331697687 10365747 4177387..4178667 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: bts:Btus_1281 luciferase-like, subgroup; luciferase-like protein 4178667 10365747 Psed_3906 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004333926.1 4177387 D 675635 CDS YP_004333927.1 331697688 10365748 4178741..4179673 1 NC_015312.1 KEGG: sro:Sros_6284 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4179673 10365748 Psed_3907 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004333927.1 4178741 D 675635 CDS YP_004333928.1 331697689 10365749 complement(4179690..4180652) 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: ade:Adeh_2212 LysR family transcriptional regulator; LysR family transcriptional regulator 4180652 10365749 Psed_3908 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004333928.1 4179690 R 675635 CDS YP_004333929.1 331697690 10365750 4180866..4181882 1 NC_015312.1 TIGRFAM: 6-phosphogluconate dehydrogenase-related protein; KEGG: fal:FRAAL1567 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase 4181882 10365750 Psed_3909 Pseudonocardia dioxanivorans CB1190 6-phosphogluconate dehydrogenase YP_004333929.1 4180866 D 675635 CDS YP_004333930.1 331697691 10365751 4181879..4183273 1 NC_015312.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: sna:Snas_2996 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 4183273 10365751 Psed_3910 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate 1-dehydrogenase YP_004333930.1 4181879 D 675635 CDS YP_004333931.1 331697692 10365752 complement(4183242..4184084) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sen:SACE_2942 hypothetical protein; GCN5-like N-acetyltransferase 4184084 10365752 Psed_3911 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004333931.1 4183242 R 675635 CDS YP_004333932.1 331697693 10365753 complement(4184090..4185169) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: gob:Gobs_0108 type 11 methyltransferase; type 11 methyltransferase 4185169 10365753 Psed_3912 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004333932.1 4184090 R 675635 CDS YP_004333933.1 331697694 10365754 complement(4185246..4188329) 1 NC_015312.1 KEGG: fal:FRAAL4738 LuxR family transcriptional regulator; LuxR family transcriptional regulator 4188329 10365754 Psed_3913 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004333933.1 4185246 R 675635 CDS YP_004333934.1 331697695 10365755 complement(4188384..4188554) 1 NC_015312.1 hypothetical protein 4188554 10365755 Psed_3914 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333934.1 4188384 R 675635 CDS YP_004333935.1 331697696 10365756 4188877..4190127 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 4190127 10365756 Psed_3915 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004333935.1 4188877 D 675635 CDS YP_004333936.1 331697697 10365757 complement(4190139..4190795) 1 NC_015312.1 KEGG: met:M446_6961 nitrile hydratase; nitrile hydratase 4190795 10365757 Psed_3916 Pseudonocardia dioxanivorans CB1190 nitrile hydratase YP_004333936.1 4190139 R 675635 CDS YP_004333937.1 331697698 10365758 complement(4190792..4191400) 1 NC_015312.1 TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: rcu:RCOM_1892310 Nitrile hydratase subunit alpha, PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 4191400 10365758 Psed_3917 Pseudonocardia dioxanivorans CB1190 nitrile hydratase subunit alpha YP_004333937.1 4190792 R 675635 CDS YP_004333938.1 331697699 10365759 4191575..4192939 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; KEGG: nml:Namu_2915 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 4192939 10365759 Psed_3918 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004333938.1 4191575 D 675635 CDS YP_004333939.1 331697700 10365760 complement(4192943..4193641) 1 NC_015312.1 KEGG: rha:RHA1_ro09027 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4193641 10365760 Psed_3919 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333939.1 4192943 R 675635 CDS YP_004333940.1 331697701 10365761 complement(4193791..4195422) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: vei:Veis_0939 extracellular solute-binding protein; ABC transporter substrate-binding protein 4195422 10365761 Psed_3920 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333940.1 4193791 R 675635 CDS YP_004333941.1 331697702 10365762 complement(4195892..4197274) 1 NC_015312.1 KEGG: bja:blr0938 dioxygenase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase 4197274 10365762 Psed_3921 Pseudonocardia dioxanivorans CB1190 phthalate 4,5-dioxygenase YP_004333941.1 4195892 R 675635 CDS YP_004333942.1 331697703 10365763 complement(4197385..4197639) 1 NC_015312.1 hypothetical protein 4197639 10365763 Psed_3922 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333942.1 4197385 R 675635 CDS YP_004333943.1 331697704 10365764 complement(4197636..4198964) 1 NC_015312.1 KEGG: bxe:Bxe_A3529 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase 4198964 10365764 Psed_3923 Pseudonocardia dioxanivorans CB1190 phthalate 4,5-dioxygenase YP_004333943.1 4197636 R 675635 CDS YP_004333944.1 331697705 10365765 complement(4199218..4200219) 1 NC_015312.1 KEGG: rha:RHA1_ro10365 dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; L-threonine 3-dehydrogenase 4200219 10365765 Psed_3924 Pseudonocardia dioxanivorans CB1190 L-threonine 3-dehydrogenase YP_004333944.1 4199218 R 675635 CDS YP_004333945.1 331697706 10365766 complement(4200234..4201883) 1 NC_015312.1 KEGG: tro:trd_A0791 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase 4201883 10365766 Psed_3925 Pseudonocardia dioxanivorans CB1190 acetolactate synthase YP_004333945.1 4200234 R 675635 CDS YP_004333946.1 331697707 10365767 4202024..4202605 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: cai:Caci_0710 protein of unknown function DUF1707; hypothetical protein 4202605 10365767 Psed_3926 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333946.1 4202024 D 675635 CDS YP_004333947.1 331697708 10365768 complement(4202631..4203209) 1 NC_015312.1 KEGG: sro:Sros_7324 hypothetical protein; hypothetical protein 4203209 10365768 Psed_3927 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333947.1 4202631 R 675635 CDS YP_004333948.1 331697709 10365769 complement(4203254..4204558) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: tcu:Tcur_4727 major facilitator superfamily protein; major facilitator superfamily protein 4204558 10365769 Psed_3928 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333948.1 4203254 R 675635 CDS YP_004333949.1 331697710 10365770 4204659..4205657 1 NC_015312.1 KEGG: mil:ML5_2285 hypothetical protein; hypothetical protein 4205657 10365770 Psed_3929 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333949.1 4204659 D 675635 CDS YP_004333950.1 331697711 10365771 complement(4205660..4207987) 1 NC_015312.1 PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: amd:AMED_1985 pyruvate dehydrogenase E1 component; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 4207987 10365771 Psed_3930 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004333950.1 4205660 R 675635 CDS YP_004333951.1 331697712 10365772 4208126..4208668 1 NC_015312.1 KEGG: rha:RHA1_ro00541 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 4208668 10365772 Psed_3931 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004333951.1 4208126 D 675635 CDS YP_004333952.1 331697713 10365773 4208679..4209995 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: gob:Gobs_4863 beta-lactamase; beta-lactamase 4209995 10365773 Psed_3932 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004333952.1 4208679 D 675635 CDS YP_004333953.1 331697714 10365774 complement(4210078..4211043) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: tcu:Tcur_4894 alcohol dehydrogenase zinc-binding domain-containing protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 4211043 10365774 Psed_3933 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004333953.1 4210078 R 675635 CDS YP_004333954.1 331697715 10365775 complement(4211068..4212285) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: msm:MSMEG_0534 permease, major facilitator family protein; major facilitator superfamily protein 4212285 10365775 Psed_3934 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004333954.1 4211068 R 675635 CDS YP_004333955.1 331697716 10365776 complement(4212282..4212947) 1 NC_015312.1 KEGG: rop:ROP_42840 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4212947 10365776 Psed_3935 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004333955.1 4212282 R 675635 CDS YP_004333956.1 331697717 10365777 4213150..4214829 1 NC_015312.1 KEGG: sna:Snas_4855 hypothetical protein; hypothetical protein 4214829 10365777 Psed_3936 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333956.1 4213150 D 675635 CDS YP_004333957.1 331697718 10365778 complement(4214899..4215447) 1 NC_015312.1 hypothetical protein 4215447 10365778 Psed_3937 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333957.1 4214899 R 675635 CDS YP_004333958.1 331697719 10365779 4215810..4216331 1 NC_015312.1 hypothetical protein 4216331 10365779 Psed_3938 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333958.1 4215810 D 675635 CDS YP_004333959.1 331697720 10365780 4216349..4217392 1 NC_015312.1 HAMAP: DNA polymerase IV; KEGG: cai:Caci_5822 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV 4217392 10365780 Psed_3939 Pseudonocardia dioxanivorans CB1190 DNA polymerase IV YP_004333959.1 4216349 D 675635 CDS YP_004333960.1 331697721 10365781 complement(4217441..4218436) 1 NC_015312.1 KEGG: fre:Franean1_3778 hypothetical protein; hypothetical protein 4218436 10365781 Psed_3940 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333960.1 4217441 R 675635 CDS YP_004333961.1 331697722 10365782 4218645..4219415 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gob:Gobs_0487 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4219415 10365782 Psed_3941 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004333961.1 4218645 D 675635 CDS YP_004333962.1 331697723 10365783 complement(4219446..4222769) 1 NC_015312.1 KEGG: fre:Franean1_3777 exonuclease SbcC; exonuclease SbcC 4222769 10365783 Psed_3942 Pseudonocardia dioxanivorans CB1190 exonuclease SbcC YP_004333962.1 4219446 R 675635 CDS YP_004333963.1 331697724 10365784 complement(4222766..4223941) 1 NC_015312.1 KEGG: fre:Franean1_3776 nuclease SbcCD, D subunit; TIGRFAM: Exonuclease SbcD; PFAM: Metallo-dependent phosphatase; nuclease SbcCD subunit D 4223941 10365784 Psed_3943 Pseudonocardia dioxanivorans CB1190 nuclease SbcCD subunit D YP_004333963.1 4222766 R 675635 CDS YP_004333964.1 331697725 10365785 4225006..4226592 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 4226592 10365785 Psed_3944 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004333964.1 4225006 D 675635 CDS YP_004333965.1 331697726 10365787 complement(4227283..4228929) 1 NC_015312.1 KEGG: rer:pREL1_0202 hypothetical protein; manually curated; PFAM: Integrase, N-terminal SAM-like, phage; integrase domain-containing protein SAM domain-containing protein 4228929 10365787 Psed_3946 Pseudonocardia dioxanivorans CB1190 integrase domain-containing protein SAM domain-containing protein YP_004333965.1 4227283 R 675635 CDS YP_004333966.1 331697727 10365788 complement(4228996..4229313) 1 NC_015312.1 KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator 4229313 10365788 Psed_3947 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004333966.1 4228996 R 675635 CDS YP_004333967.1 331697728 10365789 complement(4229310..4230398) 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: msp:Mspyr1_54040 site-specific recombinase XerD; integrase protein 4230398 10365789 Psed_3948 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004333967.1 4229310 R 675635 CDS YP_004333968.1 331697729 10365790 complement(4231115..4231213) 1 NC_015312.1 hypothetical protein 4231213 10365790 Psed_3949 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333968.1 4231115 R 675635 CDS YP_004333969.1 331697730 10365791 complement(4231784..4232185) 1 NC_015312.1 PFAM: Domain of unknown function DUF302; KEGG: bbt:BBta_1896 hypothetical protein; hypothetical protein 4232185 10365791 Psed_3950 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333969.1 4231784 R 675635 CDS YP_004333970.1 331697731 10365792 complement(4232220..4234004) 1 NC_015312.1 KEGG: fre:Franean1_3775 hypothetical protein; hypothetical protein 4234004 10365792 Psed_3951 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333970.1 4232220 R 675635 CDS YP_004333971.1 331697732 10365793 complement(4234081..4234536) 1 NC_015312.1 KEGG: mav:MAV_3625 hypothetical protein; hypothetical protein 4234536 10365793 Psed_3952 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333971.1 4234081 R 675635 CDS YP_004333972.1 331697733 10365794 complement(4234648..4236120) 1 NC_015312.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; KEGG: ami:Amir_1444 (dimethylallyl)adenosine tRNA methylthiotransferase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; (dimethylallyl)adenosine tRNA methylthiotransferase 4236120 10365794 Psed_3953 Pseudonocardia dioxanivorans CB1190 (dimethylallyl)adenosine tRNA methylthiotransferase YP_004333972.1 4234648 R 675635 CDS YP_004333973.1 331697734 10365795 4236214..4237215 1 NC_015312.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; Twin-arginine translocation pathway, signal sequence; KEGG: ami:Amir_1445 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor, TAXI family 4237215 10365795 Psed_3954 Pseudonocardia dioxanivorans CB1190 TRAP transporter solute receptor, TAXI family YP_004333973.1 4236214 D 675635 CDS YP_004333974.1 331697735 10365796 complement(4237191..4238495) 1 NC_015312.1 KEGG: amd:AMED_5688 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Tetratricopeptide TPR2; ECF subfamily RNA polymerase sigma-24 subunit 4238495 10365796 Psed_3955 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004333974.1 4237191 R 675635 CDS YP_004333975.1 331697736 10365797 complement(4238492..4238884) 1 NC_015312.1 PFAM: YCII-related; KEGG: rop:ROP_45120 hypothetical protein; hypothetical protein 4238884 10365797 Psed_3956 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333975.1 4238492 R 675635 CDS YP_004333976.1 331697737 10365798 4239093..4239698 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: sna:Snas_0200 hypothetical protein; hypothetical protein 4239698 10365798 Psed_3957 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333976.1 4239093 D 675635 CDS YP_004333977.1 331697738 10365799 complement(4239710..4241089) 1 NC_015312.1 KEGG: amd:AMED_2365 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 4241089 10365799 Psed_3958 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004333977.1 4239710 R 675635 CDS YP_004333978.1 331697739 10365800 complement(4241096..4241839) 1 NC_015312.1 KEGG: ami:Amir_1447 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 4241839 10365800 Psed_3959 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004333978.1 4241096 R 675635 CDS YP_004333979.1 331697740 10365801 4242022..4242750 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: amd:AMED_2363 ATPase component of ABC-type polar amino acid transport system; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 4242750 10365801 Psed_3960 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004333979.1 4242022 D 675635 CDS YP_004333980.1 331697741 10365802 4242809..4243696 1 NC_015312.1 KEGG: amd:AMED_2362 ABC transport system substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein 4243696 10365802 Psed_3961 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004333980.1 4242809 D 675635 CDS YP_004333981.1 331697742 10365803 4243763..4244410 1 NC_015312.1 KEGG: svi:Svir_27720 amino acid ABC transporter membrane protein; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 4244410 10365803 Psed_3962 Pseudonocardia dioxanivorans CB1190 polar amino acid ABC transporter permease YP_004333981.1 4243763 D 675635 CDS YP_004333982.1 331697743 10365804 4244407..4245306 1 NC_015312.1 KEGG: ami:Amir_1451 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 4245306 10365804 Psed_3963 Pseudonocardia dioxanivorans CB1190 polar amino acid ABC transporter permease YP_004333982.1 4244407 D 675635 CDS YP_004333983.1 331697744 10365805 complement(4245355..4246011) 1 NC_015312.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: kfl:Kfla_6908 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 4246011 10365805 Psed_3964 Pseudonocardia dioxanivorans CB1190 lysine exporter protein LysE/YggA YP_004333983.1 4245355 R 675635 CDS YP_004333984.1 331697745 10365806 4246097..4247269 1 NC_015312.1 KEGG: sco:SCO1748 expression regulator; expression regulator 4247269 10365806 Psed_3965 Pseudonocardia dioxanivorans CB1190 expression regulator YP_004333984.1 4246097 D 675635 CDS YP_004333985.1 331697746 10365807 complement(4247282..4250308) 1 NC_015312.1 HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: ami:Amir_0913 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase, repeated domain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase 4250308 10365807 Psed_3966 Pseudonocardia dioxanivorans CB1190 glutamate-ammonia-ligase adenylyltransferase YP_004333985.1 4247282 R 675635 CDS YP_004333986.1 331697747 10365808 complement(4250325..4251422) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: fra:Francci3_1854 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4251422 10365808 Psed_3967 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004333986.1 4250325 R 675635 CDS YP_004333987.1 331697748 10365809 complement(4251462..4252805) 1 NC_015312.1 TIGRFAM: Glutamine synthetase type I; KEGG: sen:SACE_1613 glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; glutamine synthetase 4252805 10365809 Psed_3968 Pseudonocardia dioxanivorans CB1190 glutamine synthetase YP_004333987.1 4251462 R 675635 CDS YP_004333988.1 331697749 10365810 complement(4252894..4254549) 1 NC_015312.1 PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; KEGG: amd:AMED_1217 exported protease; TAP domain-containing protein 4254549 10365810 Psed_3969 Pseudonocardia dioxanivorans CB1190 TAP domain-containing protein YP_004333988.1 4252894 R 675635 CDS YP_004333989.1 331697750 10365811 4254716..4255594 1 NC_015312.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: amd:AMED_1209 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4255594 10365811 Psed_3970 Pseudonocardia dioxanivorans CB1190 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004333989.1 4254716 D 675635 CDS YP_004333990.1 331697751 10365812 complement(4255655..4256785) 1 NC_015312.1 PFAM: Glutamate--cysteine ligase, GCS2; KEGG: ava:Ava_4623 hypothetical protein; glutamate--cysteine ligase GCS2 4256785 10365812 Psed_3971 Pseudonocardia dioxanivorans CB1190 glutamate--cysteine ligase GCS2 YP_004333990.1 4255655 R 675635 CDS YP_004333991.1 331697752 10365813 4257127..4257744 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: azc:AZC_0950 nitroreductase; nitroreductase 4257744 10365813 Psed_3972 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004333991.1 4257127 D 675635 CDS YP_004333992.1 331697753 10365814 complement(4257749..4259173) 1 NC_015312.1 KEGG: sen:SACE_1600 ribonuclease R; PFAM: Ribonuclease II/R; SMART: Ribonuclease II/R; ribonuclease II 4259173 10365814 Psed_3973 Pseudonocardia dioxanivorans CB1190 ribonuclease II YP_004333992.1 4257749 R 675635 CDS YP_004333993.1 331697754 10365815 4259549..4259710 1 NC_015312.1 hypothetical protein 4259710 10365815 Psed_3974 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333993.1 4259549 D 675635 CDS YP_004333994.1 331697755 10365816 4259716..4260441 1 NC_015312.1 KEGG: sma:SAV_6344 hypothetical protein; hypothetical protein 4260441 10365816 Psed_3975 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333994.1 4259716 D 675635 CDS YP_004333995.1 331697756 10365817 complement(4260592..4261314) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: mau:Micau_4347 hypothetical protein; hypothetical protein 4261314 10365817 Psed_3976 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004333995.1 4260592 R 675635 CDS YP_004333996.1 331697757 10365818 complement(4261311..4262144) 1 NC_015312.1 KEGG: svi:Svir_20690 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 4262144 10365818 Psed_3977 Pseudonocardia dioxanivorans CB1190 ureidoglycolate lyase YP_004333996.1 4261311 R 675635 CDS YP_004333997.1 331697758 10365819 complement(4262500..4264881) 1 NC_015312.1 KEGG: sen:SACE_5140 carbon monoxide dehydrogenase large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 4264881 10365819 Psed_3978 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004333997.1 4262500 R 675635 CDS YP_004333998.1 331697759 10365820 4265099..4266754 1 NC_015312.1 TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; KEGG: sen:SACE_1784 fumarate hydratase class I; PFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 4266754 10365820 Psed_3979 Pseudonocardia dioxanivorans CB1190 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_004333998.1 4265099 D 675635 CDS YP_004333999.1 331697760 10365821 complement(4266881..4267852) 1 NC_015312.1 KEGG: sen:SACE_1888 alanine rich lipoprotein LppW; alanine rich lipoprotein LppW 4267852 10365821 Psed_3980 Pseudonocardia dioxanivorans CB1190 alanine rich lipoprotein LppW YP_004333999.1 4266881 R 675635 CDS YP_004334000.1 331697761 10365822 complement(4268046..4270901) 1 NC_015312.1 KEGG: sen:SACE_1780 acetyl-CoA synthetase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type; SMART: CoA-binding; GCN5-like N-acetyltransferase 4270901 10365822 Psed_3981 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334000.1 4268046 R 675635 CDS YP_004334001.1 331697762 10365823 complement(4270894..4272060) 1 NC_015312.1 KEGG: ami:Amir_1468 histone deacetylase superfamily; PFAM: Histone deacetylase superfamily; histone deacetylase 4272060 10365823 Psed_3982 Pseudonocardia dioxanivorans CB1190 histone deacetylase YP_004334001.1 4270894 R 675635 CDS YP_004334002.1 331697763 10365824 4272231..4272953 1 NC_015312.1 KEGG: ami:Amir_1465 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor, diptheria toxin type; DtxR family iron (metal) dependent repressor 4272953 10365824 Psed_3983 Pseudonocardia dioxanivorans CB1190 DtxR family iron (metal) dependent repressor YP_004334002.1 4272231 D 675635 CDS YP_004334003.1 331697764 10365825 4273152..4274111 1 NC_015312.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: sen:SACE_1774 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 4274111 10365825 Psed_3984 Pseudonocardia dioxanivorans CB1190 UDP-glucose 4-epimerase YP_004334003.1 4273152 D 675635 CDS YP_004334004.1 331697765 10365826 complement(4274138..4275163) 1 NC_015312.1 KEGG: ami:Amir_1461 hypothetical protein; hypothetical protein 4275163 10365826 Psed_3985 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334004.1 4274138 R 675635 CDS YP_004334005.1 331697766 10365827 complement(4275892..4276785) 1 NC_015312.1 PFAM: Peptidase M23; KEGG: req:REQ_10850 metallopeptidase; peptidase M23 4276785 10365827 Psed_3986 Pseudonocardia dioxanivorans CB1190 peptidase M23 YP_004334005.1 4275892 R 675635 CDS YP_004334006.1 331697767 10365828 complement(4277193..4280744) 1 NC_015312.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rop:ROP_13260 indolepyruvate ferredoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase 4280744 10365828 Psed_3987 Pseudonocardia dioxanivorans CB1190 pyruvate/ketoisovalerate oxidoreductase YP_004334006.1 4277193 R 675635 CDS YP_004334007.1 331697768 10365829 complement(4280862..4282436) 1 NC_015312.1 KEGG: gob:Gobs_2329 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 4282436 10365829 Psed_3988 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004334007.1 4280862 R 675635 CDS YP_004334008.1 331697769 10365830 4282736..4283476 1 NC_015312.1 KEGG: sro:Sros_5635 hypothetical protein; hypothetical protein 4283476 10365830 Psed_3989 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334008.1 4282736 D 675635 CDS YP_004334009.1 331697770 10365831 4283556..4284674 1 NC_015312.1 PFAM: Beta-lactamase-like; KEGG: req:REQ_10450 metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 4284674 10365831 Psed_3990 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004334009.1 4283556 D 675635 CDS YP_004334010.1 331697771 10365832 4285020..4285355 1 NC_015312.1 KEGG: svi:Svir_17040 hypothetical protein; hypothetical protein 4285355 10365832 Psed_3991 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334010.1 4285020 D 675635 CDS YP_004334011.1 331697772 10365833 complement(4285493..4286248) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa43330 short chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 4286248 10365833 Psed_3992 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004334011.1 4285493 R 675635 CDS YP_004334012.1 331697773 10365834 complement(4286402..4287601) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_1156 MDR-like permease; major facilitator superfamily protein 4287601 10365834 Psed_3993 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334012.1 4286402 R 675635 CDS YP_004334013.1 331697774 10365835 4287649..4289130 1 NC_015312.1 KEGG: ami:Amir_5685 aromatic-L-amino-acid decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; Aromatic-L-amino-acid decarboxylase 4289130 10365835 Psed_3994 Pseudonocardia dioxanivorans CB1190 Aromatic-L-amino-acid decarboxylase YP_004334013.1 4287649 D 675635 CDS YP_004334014.1 331697775 10365836 4289190..4290164 1 NC_015312.1 PFAM: Periplasmic binding protein; KEGG: req:REQ_03550 substrate binding lipoprotein; ABC transporter substrate-binding protein 4290164 10365836 Psed_3995 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004334014.1 4289190 D 675635 CDS YP_004334015.1 331697776 10365837 complement(4290152..4291120) 1 NC_015312.1 KEGG: sen:SACE_2691 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; methionyl-tRNA formyltransferase 4291120 10365837 Psed_3996 Pseudonocardia dioxanivorans CB1190 methionyl-tRNA formyltransferase YP_004334015.1 4290152 R 675635 CDS YP_004334016.1 331697777 10365838 complement(4291242..4291868) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_3446 TetR family transcriptional regulator; TetR family transcriptional regulator 4291868 10365838 Psed_3997 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334016.1 4291242 R 675635 CDS YP_004334017.1 331697778 10365839 complement(4291865..4293016) 1 NC_015312.1 KEGG: tbi:Tbis_0526 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; long-chain-acyl-CoA dehydrogenase 4293016 10365839 Psed_3998 Pseudonocardia dioxanivorans CB1190 long-chain-acyl-CoA dehydrogenase YP_004334017.1 4291865 R 675635 CDS YP_004334018.1 331697779 10365840 complement(4293033..4293794) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rer:RER_56230 3-hydroxyacyl-CoA dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 4293794 10365840 Psed_3999 Pseudonocardia dioxanivorans CB1190 3-hydroxy-2-methylbutyryl-CoA dehydrogenase YP_004334018.1 4293033 R 675635 CDS YP_004334019.1 331697780 10365841 complement(4293876..4295021) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: amd:AMED_3855 acetyl-CoA acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 4295021 10365841 Psed_4000 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004334019.1 4293876 R 675635 CDS YP_004334020.1 331697781 10365842 complement(4295396..4295887) 1 NC_015312.1 KEGG: ace:Acel_0606 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 4295887 10365842 Psed_4001 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004334020.1 4295396 R 675635 CDS YP_004334021.1 331697782 10365843 complement(4295896..4298496) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; Collagen-binding surface protein Cna-like, B-type domain; KEGG: amd:AMED_2033 MFS transporter, multidrug efflux transporter; major facilitator superfamily protein 4298496 10365843 Psed_4002 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334021.1 4295896 R 675635 CDS YP_004334022.1 331697783 10365844 4298716..4299171 1 NC_015312.1 KEGG: nfa:nfa11310 hypothetical protein; hypothetical protein 4299171 10365844 Psed_4003 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334022.1 4298716 D 675635 CDS YP_004334023.1 331697784 10365845 complement(4299286..4301088) 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; KEGG: mil:ML5_5681 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 4301088 10365845 Psed_4004 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004334023.1 4299286 R 675635 CDS YP_004334024.1 331697785 10365846 complement(4301133..4304393) 1 NC_015312.1 KEGG: sen:SACE_3154 biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; Carboxyl transferase; SMART: Biotin carboxylase, C-terminal; carbamoyl-phosphate synthase L chain ATP-binding protein 4304393 10365846 Psed_4005 Pseudonocardia dioxanivorans CB1190 carbamoyl-phosphate synthase L chain ATP-binding protein YP_004334024.1 4301133 R 675635 CDS YP_004334025.1 331697786 10365847 complement(4304390..4305643) 1 NC_015312.1 KEGG: mva:Mvan_0393 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; isovaleryl-CoA dehydrogenase 4305643 10365847 Psed_4006 Pseudonocardia dioxanivorans CB1190 isovaleryl-CoA dehydrogenase YP_004334025.1 4304390 R 675635 CDS YP_004334026.1 331697787 10365848 complement(4305636..4306865) 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: mkm:Mkms_5277 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 4306865 10365848 Psed_4007 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004334026.1 4305636 R 675635 CDS YP_004334027.1 331697788 10365849 4306964..4307308 1 NC_015312.1 hypothetical protein 4307308 10365849 Psed_4008 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334027.1 4306964 D 675635 CDS YP_004334028.1 331697789 10365850 complement(4307329..4307856) 1 NC_015312.1 PFAM: UspA; KEGG: sma:SAV_7295 hypothetical protein; UspA domain-containing protein 4307856 10365850 Psed_4009 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004334028.1 4307329 R 675635 CDS YP_004334029.1 331697790 10365851 complement(4307853..4309208) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ace:Acel_0045 major facilitator transporter; major facilitator superfamily protein 4309208 10365851 Psed_4010 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334029.1 4307853 R 675635 CDS YP_004334030.1 331697791 10365852 complement(4309205..4309726) 1 NC_015312.1 KEGG: ace:Acel_0044 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4309726 10365852 Psed_4011 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004334030.1 4309205 R 675635 CDS YP_004334031.1 331697792 10365853 4309875..4310273 1 NC_015312.1 KEGG: amd:AMED_8818 hypothetical protein; hypothetical protein 4310273 10365853 Psed_4012 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334031.1 4309875 D 675635 CDS YP_004334032.1 331697793 10365854 4310294..4311781 1 NC_015312.1 KEGG: mva:Mvan_1920 short chain dehydrogenase; short chain dehydrogenase 4311781 10365854 Psed_4013 Pseudonocardia dioxanivorans CB1190 short chain dehydrogenase YP_004334032.1 4310294 D 675635 CDS YP_004334033.1 331697794 10365855 4311897..4315271 1 NC_015312.1 KEGG: nml:Namu_3908 exodeoxyribonuclease V subunit gamma; TIGRFAM: Exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma 4315271 10365855 Psed_4014 Pseudonocardia dioxanivorans CB1190 exodeoxyribonuclease V subunit gamma YP_004334033.1 4311897 D 675635 CDS YP_004334034.1 331697795 10365856 4315268..4318681 1 NC_015312.1 TIGRFAM: Exodeoxyribonuclease V, beta subunit; KEGG: cfl:Cfla_2429 exodeoxyribonuclease V; PFAM: DNA helicase, UvrD/REP type; exodeoxyribonuclease V subunit beta 4318681 10365856 Psed_4015 Pseudonocardia dioxanivorans CB1190 exodeoxyribonuclease V subunit beta YP_004334034.1 4315268 D 675635 CDS YP_004334035.1 331697796 10365857 4318678..4320843 1 NC_015312.1 TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: nml:Namu_3906 exodeoxyribonuclease V subunit alpha; SMART: ATPase, AAA+ type, core; exodeoxyribonuclease V subunit alpha 4320843 10365857 Psed_4016 Pseudonocardia dioxanivorans CB1190 exodeoxyribonuclease V subunit alpha YP_004334035.1 4318678 D 675635 CDS YP_004334036.1 331697797 10365858 4320921..4322597 1 NC_015312.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Signal transduction response regulator, receiver domain; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: fal:FRAAL1961 thioredoxin reductase; SMART: Signal transduction response regulator, receiver domain; response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4322597 10365858 Psed_4017 Pseudonocardia dioxanivorans CB1190 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004334036.1 4320921 D 675635 CDS YP_004334037.1 331697798 10365859 4322594..4324057 1 NC_015312.1 KEGG: rha:RHA1_ro04003 sensor kinase, two-component system; PFAM: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 4324057 10365859 Psed_4018 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004334037.1 4322594 D 675635 CDS YP_004334038.1 331697799 10365860 4324131..4324469 1 NC_015312.1 KEGG: req:REQ_46000 hypothetical protein; hypothetical protein 4324469 10365860 Psed_4019 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334038.1 4324131 D 675635 CDS YP_004334039.1 331697800 10365861 complement(4324491..4324661) 1 NC_015312.1 KEGG: lxx:Lxx21740 hypothetical protein; hypothetical protein 4324661 10365861 Psed_4020 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334039.1 4324491 R 675635 CDS YP_004334040.1 331697801 10365862 4324909..4325784 1 NC_015312.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mil:ML5_5193 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD 4325784 10365862 Psed_4021 Pseudonocardia dioxanivorans CB1190 bifunctional protein folD YP_004334040.1 4324909 D 675635 CDS YP_004334041.1 331697802 10365863 complement(4325795..4327066) 1 NC_015312.1 KEGG: fri:FraEuI1c_0839 drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; Bcr/CflA subfamily drug resistance transporter 4327066 10365863 Psed_4022 Pseudonocardia dioxanivorans CB1190 Bcr/CflA subfamily drug resistance transporter YP_004334041.1 4325795 R 675635 CDS YP_004334042.1 331697803 10365864 complement(4327063..4328769) 1 NC_015312.1 PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; KEGG: amd:AMED_2697 SARP family transcriptional regulator fused with ATPase domain; SARP family transcriptional regulator 4328769 10365864 Psed_4023 Pseudonocardia dioxanivorans CB1190 SARP family transcriptional regulator YP_004334042.1 4327063 R 675635 CDS YP_004334043.1 331697804 10365866 complement(4329487..4329801) 1 NC_015312.1 PFAM: Branched-chain amino acid transport, AzlD; KEGG: rsk:RSKD131_2097 branched-chain amino acid transport; branched-chain amino acid transport 4329801 10365866 Psed_4025 Pseudonocardia dioxanivorans CB1190 branched-chain amino acid transport YP_004334043.1 4329487 R 675635 CDS YP_004334044.1 331697805 10365867 complement(4329794..4330543) 1 NC_015312.1 PFAM: Branched-chain amino acid transport, permease; KEGG: hla:Hlac_1381 AzlC family protein; AzlC family protein 4330543 10365867 Psed_4026 Pseudonocardia dioxanivorans CB1190 AzlC family protein YP_004334044.1 4329794 R 675635 CDS YP_004334045.1 331697806 10365868 complement(4330864..4331328) 1 NC_015312.1 KEGG: nca:Noca_1870 regulatory protein, MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4331328 10365868 Psed_4027 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004334045.1 4330864 R 675635 CDS YP_004334046.1 331697807 10365869 4331505..4332593 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A1008 hypothetical protein; NAD-dependent epimerase/dehydratase 4332593 10365869 Psed_4028 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004334046.1 4331505 D 675635 CDS YP_004334047.1 331697808 10365870 complement(4332627..4333316) 1 NC_015312.1 KEGG: ske:Sked_05160 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4333316 10365870 Psed_4029 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334047.1 4332627 R 675635 CDS YP_004334048.1 331697809 10365871 4333393..4334121 1 NC_015312.1 PFAM: Cysteine-rich domain; KEGG: mjl:Mjls_4766 hypothetical protein; hypothetical protein 4334121 10365871 Psed_4030 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334048.1 4333393 D 675635 CDS YP_004334049.1 331697810 10365872 4334118..4335584 1 NC_015312.1 KEGG: fal:FRAAL3348 Fe4-S4 ferredoxin; TIGRFAM: Iron-sulphur cluster binding protein; PFAM: Domain of unknown function DUF162; iron-sulfur cluster binding protein 4335584 10365872 Psed_4031 Pseudonocardia dioxanivorans CB1190 iron-sulfur cluster binding protein YP_004334049.1 4334118 D 675635 CDS YP_004334050.1 331697811 10365874 4336274..4337050 1 NC_015312.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: scb:SCAB_29181 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase 4337050 10365874 Psed_4033 Pseudonocardia dioxanivorans CB1190 5-formyltetrahydrofolate cyclo-ligase YP_004334050.1 4336274 D 675635 CDS YP_004334051.1 331697812 10365875 4337109..4337618 1 NC_015312.1 KEGG: nfa:nfa36990 hypothetical protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; Appr-1-p processing domain-containing protein 4337618 10365875 Psed_4034 Pseudonocardia dioxanivorans CB1190 Appr-1-p processing domain-containing protein YP_004334051.1 4337109 D 675635 CDS YP_004334052.1 331697813 10365876 complement(4337631..4338710) 1 NC_015312.1 KEGG: fre:Franean1_4792 hypothetical protein; hypothetical protein 4338710 10365876 Psed_4035 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334052.1 4337631 R 675635 CDS YP_004334053.1 331697814 10365877 complement(4338719..4343239) 1 NC_015312.1 KEGG: fre:Franean1_4793 hypothetical protein; hypothetical protein 4343239 10365877 Psed_4036 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334053.1 4338719 R 675635 CDS YP_004334054.1 331697815 10365878 complement(4343236..4343958) 1 NC_015312.1 KEGG: fre:Franean1_4794 membrane protein; hypothetical protein 4343958 10365878 Psed_4037 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334054.1 4343236 R 675635 CDS YP_004334055.1 331697816 10365879 complement(4343955..4345520) 1 NC_015312.1 KEGG: fre:Franean1_1848 hypothetical protein; hypothetical protein 4345520 10365879 Psed_4038 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334055.1 4343955 R 675635 CDS YP_004334056.1 331697817 10365880 4345760..4346881 1 NC_015312.1 KEGG: aau:AAur_pTC20181 pyridoxal-phosphate dependent enzyme; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cysteine synthase 4346881 10365880 Psed_4039 Pseudonocardia dioxanivorans CB1190 Cysteine synthase YP_004334056.1 4345760 D 675635 CDS YP_004334057.1 331697818 10365881 4346932..4347618 1 NC_015312.1 KEGG: bge:BC1002_5910 hypothetical protein; hypothetical protein 4347618 10365881 Psed_4040 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334057.1 4346932 D 675635 CDS YP_004334058.1 331697819 10365882 complement(4347651..4348523) 1 NC_015312.1 KEGG: rha:RHA1_ro00619 alkanesulfonate monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 4348523 10365882 Psed_4041 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004334058.1 4347651 R 675635 CDS YP_004334059.1 331697820 10365883 4348757..4350265 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_3206 major facilitator transporter; major facilitator superfamily protein 4350265 10365883 Psed_4042 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334059.1 4348757 D 675635 CDS YP_004334060.1 331697821 10365884 complement(4350279..4351163) 1 NC_015312.1 KEGG: bmj:BMULJ_04328 serine/threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threo-3-hydroxyaspartate ammonia-lyase 4351163 10365884 Psed_4043 Pseudonocardia dioxanivorans CB1190 Threo-3-hydroxyaspartate ammonia-lyase YP_004334060.1 4350279 R 675635 CDS YP_004334061.1 331697822 10365886 complement(4351663..4352736) 1 NC_015312.1 PFAM: Cobalamin (vitamin B12)-binding; KEGG: ami:Amir_0967 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 4352736 10365886 Psed_4045 Pseudonocardia dioxanivorans CB1190 cobalamin B12-binding domain-containing protein YP_004334061.1 4351663 R 675635 CDS YP_004334062.1 331697823 10365887 complement(4352733..4354592) 1 NC_015312.1 KEGG: mil:ML5_5570 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase 4354592 10365887 Psed_4046 Pseudonocardia dioxanivorans CB1190 Ser/Thr phosphatase YP_004334062.1 4352733 R 675635 CDS YP_004334063.1 331697824 10365888 complement(4354807..4354908) 1 NC_015312.1 hypothetical protein 4354908 10365888 Psed_4047 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334063.1 4354807 R 675635 CDS YP_004334064.1 331697825 10365889 4355078..4356007 1 NC_015312.1 PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: amd:AMED_3432 RNA pseudouridylate synthase; pseudouridine synthase 4356007 10365889 Psed_4048 Pseudonocardia dioxanivorans CB1190 pseudouridine synthase YP_004334064.1 4355078 D 675635 CDS YP_004334065.1 331697826 10365890 complement(4356310..4357074) 1 NC_015312.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: smd:Smed_5816 NADP oxidoreductase coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase 4357074 10365890 Psed_4049 Pseudonocardia dioxanivorans CB1190 coenzyme F420-dependent NADP oxidoreductase YP_004334065.1 4356310 R 675635 CDS YP_004334066.1 331697827 10365891 4357143..4357982 1 NC_015312.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fal:FRAAL3649 LysR family transcriptional regulator; LysR family transcriptional regulator 4357982 10365891 Psed_4050 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004334066.1 4357143 D 675635 CDS YP_004334067.1 331697828 10365892 4358170..4358958 1 NC_015312.1 KEGG: fra:Francci3_2566 hypothetical protein; hypothetical protein 4358958 10365892 Psed_4051 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334067.1 4358170 D 675635 CDS YP_004334068.1 331697829 10365893 complement(4358936..4360114) 1 NC_015312.1 KEGG: rer:RER_18000 oxidoreductase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase 4360114 10365893 Psed_4052 Pseudonocardia dioxanivorans CB1190 (S)-2-hydroxy-acid oxidase YP_004334068.1 4358936 R 675635 CDS YP_004334069.1 331697830 10365894 complement(4360279..4362066) 1 NC_015312.1 KEGG: tbi:Tbis_0974 histidine kinase; hypothetical protein 4362066 10365894 Psed_4053 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334069.1 4360279 R 675635 CDS YP_004334070.1 331697831 10365895 complement(4362216..4362773) 1 NC_015312.1 hypothetical protein 4362773 10365895 Psed_4054 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334070.1 4362216 R 675635 CDS YP_004334071.1 331697832 10365896 4362961..4364067 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: sna:Snas_3562 beta-lactamase; beta-lactamase 4364067 10365896 Psed_4055 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004334071.1 4362961 D 675635 CDS YP_004334072.1 331697833 10365897 complement(4364080..4364700) 1 NC_015312.1 KEGG: sro:Sros_3610 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 4364700 10365897 Psed_4056 Pseudonocardia dioxanivorans CB1190 Sua5/YciO/YrdC/YwlC family protein YP_004334072.1 4364080 R 675635 CDS YP_004334073.1 331697834 10365898 4364773..4367124 1 NC_015312.1 KEGG: mav:MAV_4566 hypothetical protein; hypothetical protein 4367124 10365898 Psed_4057 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334073.1 4364773 D 675635 CDS YP_004334074.1 331697835 10365899 4367256..4368215 1 NC_015312.1 SMART: HTH transcriptional regulator, DeoR N-terminal; KEGG: sen:SACE_7336 DeoR family transcriptional regulator; regulatory protein DeoR 4368215 10365899 Psed_4058 Pseudonocardia dioxanivorans CB1190 regulatory protein DeoR YP_004334074.1 4367256 D 675635 CDS YP_004334075.1 331697836 10365900 4368276..4368674 1 NC_015312.1 KEGG: amd:AMED_6092 hypothetical protein; manually curated; HAMAP: Uncharacterised protein family UPF0225; hypothetical protein 4368674 10365900 Psed_4059 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334075.1 4368276 D 675635 CDS YP_004334076.1 331697837 10365901 4368856..4370751 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: cai:Caci_5807 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4370751 10365901 Psed_4060 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004334076.1 4368856 D 675635 CDS YP_004334077.1 331697838 10365902 4370748..4372604 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: cai:Caci_5809 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4372604 10365902 Psed_4061 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004334077.1 4370748 D 675635 CDS YP_004334078.1 331697839 10365903 4372708..4373937 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: gbr:Gbro_0902 major facilitator superfamily protein; major facilitator superfamily protein 4373937 10365903 Psed_4062 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334078.1 4372708 D 675635 CDS YP_004334079.1 331697840 10365904 4374085..4376310 1 NC_015312.1 TIGRFAM: Trehalose synthase; KEGG: mkm:Mkms_0356 trehalose synthase; trehalose synthase 4376310 10365904 Psed_4063 Pseudonocardia dioxanivorans CB1190 trehalose synthase YP_004334079.1 4374085 D 675635 CDS YP_004334080.1 331697841 10365905 4376307..4376726 1 NC_015312.1 KEGG: amd:AMED_5931 hypothetical protein; hypothetical protein 4376726 10365905 Psed_4064 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334080.1 4376307 D 675635 CDS YP_004334081.1 331697842 10365906 complement(4376811..4379057) 1 NC_015312.1 PFAM: Peptidase M28; KEGG: nml:Namu_2824 peptidase M28; peptidase M28 4379057 10365906 Psed_4065 Pseudonocardia dioxanivorans CB1190 peptidase M28 YP_004334081.1 4376811 R 675635 CDS YP_004334082.1 331697843 10365907 complement(4379146..4382232) 1 NC_015312.1 KEGG: art:Arth_0977 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; type III restriction protein res subunit 4382232 10365907 Psed_4066 Pseudonocardia dioxanivorans CB1190 type III restriction protein res subunit YP_004334082.1 4379146 R 675635 CDS YP_004334083.1 331697844 10365908 complement(4382381..4382968) 1 NC_015312.1 PFAM: Protein of unknown function DUF1470; KEGG: amd:AMED_3547 hypothetical protein; hypothetical protein 4382968 10365908 Psed_4067 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334083.1 4382381 R 675635 CDS YP_004334084.1 331697845 10365909 4383197..4383637 1 NC_015312.1 KEGG: reu:Reut_C6041 hypothetical protein; hypothetical protein 4383637 10365909 Psed_4068 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334084.1 4383197 D 675635 CDS YP_004334085.1 331697846 10365910 4383702..4384547 1 NC_015312.1 KEGG: bja:bll0271 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4384547 10365910 Psed_4069 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004334085.1 4383702 D 675635 CDS YP_004334086.1 331697847 10365911 4384613..4385461 1 NC_015312.1 KEGG: bja:bll0271 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4385461 10365911 Psed_4070 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004334086.1 4384613 D 675635 CDS YP_004334087.1 331697848 10365912 complement(4385516..4386328) 1 NC_015312.1 KEGG: sgr:SGR_6537 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Domain of unknown function DUF1503; hypothetical protein 4386328 10365912 Psed_4071 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334087.1 4385516 R 675635 CDS YP_004334088.1 331697849 10365913 4386517..4386876 1 NC_015312.1 KEGG: mjl:Mjls_0419 hypothetical protein; hypothetical protein 4386876 10365913 Psed_4072 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334088.1 4386517 D 675635 CDS YP_004334089.1 331697850 10365914 4387653..4388084 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: nda:Ndas_1181 cupin 2 conserved barrel domain protein; cupin 4388084 10365914 Psed_4073 Pseudonocardia dioxanivorans CB1190 cupin YP_004334089.1 4387653 D 675635 CDS YP_004334090.1 331697851 10365915 4388458..4389225 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: gbr:Gbro_2555 alpha/beta hydrolase fold protein; alpha/beta hydrolase 4389225 10365915 Psed_4074 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334090.1 4388458 D 675635 CDS YP_004334091.1 331697852 10365916 complement(4389285..4389746) 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: rpc:RPC_4620 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 4389746 10365916 Psed_4075 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004334091.1 4389285 R 675635 CDS YP_004334092.1 331697853 10365917 complement(4389743..4389877) 1 NC_015312.1 hypothetical protein 4389877 10365917 Psed_4076 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334092.1 4389743 R 675635 CDS YP_004334093.1 331697854 10365918 4390086..4391267 1 NC_015312.1 KEGG: amd:AMED_5171 dynamin family protein; hypothetical protein 4391267 10365918 Psed_4077 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334093.1 4390086 D 675635 CDS YP_004334094.1 331697855 10365919 complement(4391286..4392017) 1 NC_015312.1 KEGG: mkm:Mkms_5685 hypothetical protein; hypothetical protein 4392017 10365919 Psed_4078 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334094.1 4391286 R 675635 CDS YP_004334095.1 331697856 10365920 4392440..4393411 1 NC_015312.1 KEGG: fal:FRAAL3972 aldo/keto oxidoreductase, NAD(P)-dependent, related to aryl-alcohol dehydrogenases; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 4393411 10365920 Psed_4079 Pseudonocardia dioxanivorans CB1190 aryl-alcohol dehydrogenase YP_004334095.1 4392440 D 675635 CDS YP_004334096.1 331697857 10365921 complement(4393480..4394286) 1 NC_015312.1 PFAM: Protein of unknown function DUF574; KEGG: saq:Sare_1317 hypothetical protein; hypothetical protein 4394286 10365921 Psed_4080 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334096.1 4393480 R 675635 CDS YP_004334097.1 331697858 10365922 4394400..4396544 1 NC_015312.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-3; KEGG: ami:Amir_6871 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4396544 10365922 Psed_4081 Pseudonocardia dioxanivorans CB1190 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004334097.1 4394400 D 675635 CDS YP_004334098.1 331697859 10365923 4396746..4396925 1 NC_015312.1 hypothetical protein 4396925 10365923 Psed_4082 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334098.1 4396746 D 675635 CDS YP_004334099.1 331697860 10365924 4397056..4397463 1 NC_015312.1 KEGG: gob:Gobs_2804 hypothetical protein; hypothetical protein 4397463 10365924 Psed_4083 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334099.1 4397056 D 675635 CDS YP_004334100.1 331697861 10365925 complement(4397492..4397827) 1 NC_015312.1 KEGG: mjl:Mjls_0719 hypothetical protein; hypothetical protein 4397827 10365925 Psed_4084 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334100.1 4397492 R 675635 CDS YP_004334101.1 331697862 10365926 4397904..4398278 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nda:Ndas_5080 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4398278 10365926 Psed_4085 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004334101.1 4397904 D 675635 CDS YP_004334102.1 331697863 10365927 complement(4398288..4399160) 1 NC_015312.1 KEGG: fre:Franean1_5228 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4399160 10365927 Psed_4086 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004334102.1 4398288 R 675635 CDS YP_004334103.1 331697864 10365928 complement(4399157..4400266) 1 NC_015312.1 KEGG: pla:Plav_1774 alkanal monooxygenase; PFAM: Luciferase-like, subgroup; alkanal monooxygenase 4400266 10365928 Psed_4087 Pseudonocardia dioxanivorans CB1190 alkanal monooxygenase YP_004334103.1 4399157 R 675635 CDS YP_004334104.1 331697865 10365929 complement(4400453..4401559) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: kfl:Kfla_3790 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 4401559 10365929 Psed_4088 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004334104.1 4400453 R 675635 CDS YP_004334105.1 331697866 10365930 complement(4401556..4402638) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: kfl:Kfla_3791 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 4402638 10365930 Psed_4089 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004334105.1 4401556 R 675635 CDS YP_004334106.1 331697867 10365931 complement(4402656..4403669) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tbi:Tbis_1849 binding-protein-dependent transporter inner membrane component; ABC transporter permease 4403669 10365931 Psed_4090 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334106.1 4402656 R 675635 CDS YP_004334107.1 331697868 10365932 complement(4403778..4405529) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sro:Sros_5913 ABC-type dipeptide transport system periplasmic component-like protein; ABC transporter substrate-binding protein 4405529 10365932 Psed_4091 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004334107.1 4403778 R 675635 CDS YP_004334108.1 331697869 10365933 complement(4405591..4406586) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sro:Sros_5914 ABC transporter, permease; ABC transporter permease 4406586 10365933 Psed_4092 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334108.1 4405591 R 675635 CDS YP_004334109.1 331697870 10365934 4407027..4407509 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: fal:FRAAL2500 hypothetical protein; polyketide cyclase/dehydrase 4407509 10365934 Psed_4093 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004334109.1 4407027 D 675635 CDS YP_004334110.1 331697871 10365935 complement(4407583..4408314) 1 NC_015312.1 KEGG: rop:ROP_23820 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4408314 10365935 Psed_4094 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004334110.1 4407583 R 675635 CDS YP_004334111.1 331697872 10365936 complement(4408311..4409978) 1 NC_015312.1 KEGG: pla:Plav_1766 cyclohexanecarboxylate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 4409978 10365936 Psed_4095 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004334111.1 4408311 R 675635 CDS YP_004334112.1 331697873 10365937 complement(4410010..4410948) 1 NC_015312.1 KEGG: rop:ROP_46170 oxidoreductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 4410948 10365937 Psed_4096 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004334112.1 4410010 R 675635 CDS YP_004334113.1 331697874 10365938 4411056..4411727 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_23780 TetR family transcriptional regulator; TetR family transcriptional regulator 4411727 10365938 Psed_4097 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334113.1 4411056 D 675635 CDS YP_004334114.1 331697875 10365939 4411724..4412524 1 NC_015312.1 KEGG: nml:Namu_0879 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; naphthoate synthase 4412524 10365939 Psed_4098 Pseudonocardia dioxanivorans CB1190 naphthoate synthase YP_004334114.1 4411724 D 675635 CDS YP_004334115.1 331697876 10365940 4412535..4413686 1 NC_015312.1 KEGG: nca:Noca_4298 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 4413686 10365940 Psed_4099 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004334115.1 4412535 D 675635 CDS YP_004334116.1 331697877 10365941 4413738..4414073 1 NC_015312.1 hypothetical protein 4414073 10365941 Psed_4100 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334116.1 4413738 D 675635 CDS YP_004334117.1 331697878 10365942 complement(4414153..4414950) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: efa:EF0426 gluconate 5-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 4414950 10365942 Psed_4101 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004334117.1 4414153 R 675635 CDS YP_004334118.1 331697879 10365943 complement(4415021..4415278) 1 NC_015312.1 KEGG: rha:RHA1_ro08377 hypothetical protein; hypothetical protein 4415278 10365943 Psed_4102 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334118.1 4415021 R 675635 CDS YP_004334119.1 331697880 10365944 complement(4415326..4417053) 1 NC_015312.1 KEGG: rha:RHA1_ro02518 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; 4-coumarate--CoA ligase 4417053 10365944 Psed_4103 Pseudonocardia dioxanivorans CB1190 4-coumarate--CoA ligase YP_004334119.1 4415326 R 675635 CDS YP_004334120.1 331697881 10365945 complement(4417164..4418243) 1 NC_015312.1 KEGG: nml:Namu_1715 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; NADPH dehydrogenase 4418243 10365945 Psed_4104 Pseudonocardia dioxanivorans CB1190 NADPH dehydrogenase YP_004334120.1 4417164 R 675635 CDS YP_004334121.1 331697882 10365946 complement(4418441..4418596) 1 NC_015312.1 KEGG: mva:Mvan_2532 hypothetical protein; hypothetical protein 4418596 10365946 Psed_4105 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334121.1 4418441 R 675635 CDS YP_004334122.1 331697883 10365947 4418878..4420395 1 NC_015312.1 KEGG: sgr:SGR_1958 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; catalase 4420395 10365947 Psed_4106 Pseudonocardia dioxanivorans CB1190 catalase YP_004334122.1 4418878 D 675635 CDS YP_004334123.1 331697884 10365948 complement(4420423..4421037) 1 NC_015312.1 hypothetical protein 4421037 10365948 Psed_4107 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334123.1 4420423 R 675635 CDS YP_004334124.1 331697885 10365949 complement(4421284..4422045) 1 NC_015312.1 KEGG: msm:MSMEG_3335 transcriptional regulator, IclR family protein, PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4422045 10365949 Psed_4108 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004334124.1 4421284 R 675635 CDS YP_004334125.1 331697886 10365950 4422205..4423071 1 NC_015312.1 PFAM: Aldehyde-lyase domain; KEGG: msm:MSMEG_6298 malyl-CoA lyase; HpcH/HpaI aldolase 4423071 10365950 Psed_4109 Pseudonocardia dioxanivorans CB1190 HpcH/HpaI aldolase YP_004334125.1 4422205 D 675635 CDS YP_004334126.1 331697887 10365951 4423068..4424468 1 NC_015312.1 PFAM: MmgE/PrpD; KEGG: rop:ROP_31310 hypothetical protein; MmgE/PrpD family protein 4424468 10365951 Psed_4110 Pseudonocardia dioxanivorans CB1190 MmgE/PrpD family protein YP_004334126.1 4423068 D 675635 CDS YP_004334127.1 331697888 10365952 4424465..4425649 1 NC_015312.1 KEGG: fal:FRAAL3412 alpha-methylacyl-CoA racemase; PFAM: CoA-transferase III; formyl-CoA transferase 4425649 10365952 Psed_4111 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334127.1 4424465 D 675635 CDS YP_004334128.1 331697889 10365953 4425689..4426840 1 NC_015312.1 KEGG: sti:Sthe_1794 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 4426840 10365953 Psed_4112 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004334128.1 4425689 D 675635 CDS YP_004334129.1 331697890 10365954 4426882..4427391 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: sti:Sthe_1792 MaoC domain protein dehydratase; acyl dehydratase MaoC 4427391 10365954 Psed_4113 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004334129.1 4426882 D 675635 CDS YP_004334130.1 331697891 10365955 4427489..4427839 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro05939 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4427839 10365955 Psed_4114 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004334130.1 4427489 D 675635 CDS YP_004334131.1 331697892 10365956 complement(4427853..4428674) 1 NC_015312.1 PFAM: Protein of unknown function DUF2236; KEGG: sna:Snas_2225 hypothetical protein; hypothetical protein 4428674 10365956 Psed_4115 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334131.1 4427853 R 675635 CDS YP_004334132.1 331697893 10365957 4428832..4430928 1 NC_015312.1 KEGG: nda:Ndas_1369 ATPase AAA-2 domain protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; ATPase 4430928 10365957 Psed_4116 Pseudonocardia dioxanivorans CB1190 ATPase YP_004334132.1 4428832 D 675635 CDS YP_004334133.1 331697894 10365958 complement(4430915..4432123) 1 NC_015312.1 KEGG: fri:FraEuI1c_4500 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4432123 10365958 Psed_4117 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004334133.1 4430915 R 675635 CDS YP_004334134.1 331697895 10365959 complement(4432113..4432454) 1 NC_015312.1 PFAM: YCII-related; KEGG: fri:FraEuI1c_4501 YCII-related protein; hypothetical protein 4432454 10365959 Psed_4118 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334134.1 4432113 R 675635 CDS YP_004334135.1 331697896 10365960 4432632..4433075 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: amd:AMED_4721 activator of HSP90 ATPase; Activator of Hsp90 ATPase 1 family protein 4433075 10365960 Psed_4119 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004334135.1 4432632 D 675635 CDS YP_004334136.1 331697897 10365961 complement(4433202..4434290) 1 NC_015312.1 PFAM: Domain of unknown function DUF125, transmembrane; KEGG: rop:ROP_21520 hypothetical membrane protein; hypothetical protein 4434290 10365961 Psed_4120 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334136.1 4433202 R 675635 CDS YP_004334137.1 331697898 10365962 complement(4434509..4435393) 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 4435393 10365962 Psed_4121 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004334137.1 4434509 R 675635 CDS YP_004334138.1 331697899 10365963 complement(4435471..4437204) 1 NC_015312.1 KEGG: msm:MSMEG_6826 L-lactate permease; TIGRFAM: L-lactate permease; PFAM: L-lactate permease; L-lactate transport 4437204 10365963 Psed_4122 Pseudonocardia dioxanivorans CB1190 L-lactate transport YP_004334138.1 4435471 R 675635 CDS YP_004334139.1 331697900 10365964 complement(4437354..4438022) 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: srt:Srot_1543 nitroreductase; nitroreductase 4438022 10365964 Psed_4123 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004334139.1 4437354 R 675635 CDS YP_004334140.1 331697901 10365965 complement(4438040..4439035) 1 NC_015312.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; KEGG: avn:Avin_43690 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; 34-dihydroxy-2-butanone 4-phosphate synthase 4439035 10365965 Psed_4124 Pseudonocardia dioxanivorans CB1190 34-dihydroxy-2-butanone 4-phosphate synthase YP_004334140.1 4438040 R 675635 CDS YP_004334141.1 331697902 10365966 complement(4439127..4439939) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: npu:Npun_R6557 alpha/beta hydrolase fold protein; alpha/beta hydrolase 4439939 10365966 Psed_4125 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334141.1 4439127 R 675635 CDS YP_004334142.1 331697903 10365967 4440274..4441356 1 NC_015312.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: rxy:Rxyl_0351 alcohol dehydrogenase GroES-like protein; SMART: Polyketide synthase, enoylreductase; L-iditol 2-dehydrogenase 4441356 10365967 Psed_4126 Pseudonocardia dioxanivorans CB1190 L-iditol 2-dehydrogenase YP_004334142.1 4440274 D 675635 CDS YP_004334143.1 331697904 10365968 4441388..4442182 1 NC_015312.1 KEGG: bbe:BBR47_10970 glucose 1-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4442182 10365968 Psed_4127 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004334143.1 4441388 D 675635 CDS YP_004334144.1 331697905 10365969 4442482..4443819 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mta:Moth_2103 major facilitator transporter; major facilitator superfamily protein 4443819 10365969 Psed_4128 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334144.1 4442482 D 675635 CDS YP_004334145.1 331697906 10365970 4443965..4444750 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bur:Bcep18194_B1185 alpha/beta hydrolase; alpha/beta hydrolase 4444750 10365970 Psed_4129 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334145.1 4443965 D 675635 CDS YP_004334146.1 331697907 10365971 4444747..4445508 1 NC_015312.1 KEGG: cak:Caul_1939 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4445508 10365971 Psed_4130 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004334146.1 4444747 D 675635 CDS YP_004334147.1 331697908 10365972 4445542..4446792 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_0573 luciferase protein; luciferase-like protein 4446792 10365972 Psed_4131 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004334147.1 4445542 D 675635 CDS YP_004334148.1 331697909 10365973 4446912..4448855 1 NC_015312.1 KEGG: gob:Gobs_4842 phytochrome sensor protein; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR 4448855 10365973 Psed_4132 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004334148.1 4446912 D 675635 CDS YP_004334149.1 331697910 10365974 4448870..4450711 1 NC_015312.1 KEGG: gob:Gobs_4842 phytochrome sensor protein; PFAM: GAF; SMART: GAF; GAF domain-containing protein 4450711 10365974 Psed_4133 Pseudonocardia dioxanivorans CB1190 GAF domain-containing protein YP_004334149.1 4448870 D 675635 CDS YP_004334150.1 331697911 10365975 4450771..4451727 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: fal:FRAAL4834 monooxygenase, FMN dependent; luciferase-like protein 4451727 10365975 Psed_4134 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004334150.1 4450771 D 675635 CDS YP_004334151.1 331697912 10365976 4451793..4452383 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL4715 TetR family transcriptional regulator; TetR family transcriptional regulator 4452383 10365976 Psed_4135 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334151.1 4451793 D 675635 CDS YP_004334152.1 331697913 10365977 complement(4452411..4453760) 1 NC_015312.1 KEGG: ami:Amir_3198 acyl transferase; hypothetical protein 4453760 10365977 Psed_4136 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334152.1 4452411 R 675635 CDS YP_004334153.1 331697914 10365978 4453877..4454986 1 NC_015312.1 KEGG: rer:RER_08310 zinc-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; L-threonine 3-dehydrogenase 4454986 10365978 Psed_4137 Pseudonocardia dioxanivorans CB1190 L-threonine 3-dehydrogenase YP_004334153.1 4453877 D 675635 CDS YP_004334154.1 331697915 10365979 4454983..4456122 1 NC_015312.1 KEGG: aac:Aaci_1851 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 4456122 10365979 Psed_4138 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334154.1 4454983 D 675635 CDS YP_004334155.1 331697916 10365980 complement(4456119..4456364) 1 NC_015312.1 KEGG: nml:Namu_3832 hypothetical protein; hypothetical protein 4456364 10365980 Psed_4139 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334155.1 4456119 R 675635 CDS YP_004334156.1 331697917 10365981 4456486..4459464 1 NC_015312.1 KEGG: sro:Sros_1038 ATPase-like protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 4459464 10365981 Psed_4140 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004334156.1 4456486 D 675635 CDS YP_004334157.1 331697918 10365982 4459569..4460768 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_5175 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein 4460768 10365982 Psed_4141 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004334157.1 4459569 D 675635 CDS YP_004334158.1 331697919 10365983 complement(4460818..4461438) 1 NC_015312.1 KEGG: amd:AMED_0662 hypothetical protein; hypothetical protein 4461438 10365983 Psed_4142 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334158.1 4460818 R 675635 CDS YP_004334159.1 331697920 10365984 complement(4461524..4462027) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gvi:glr3411 hypothetical protein; GCN5-like N-acetyltransferase 4462027 10365984 Psed_4143 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334159.1 4461524 R 675635 CDS YP_004334160.1 331697921 10365985 complement(4462054..4464627) 1 NC_015312.1 KEGG: ami:Amir_3228 osmosensitive K channel His kinase sensor; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; osmosensitive K channel His kinase sensor 4464627 10365985 Psed_4144 Pseudonocardia dioxanivorans CB1190 osmosensitive K channel His kinase sensor YP_004334160.1 4462054 R 675635 CDS YP_004334161.1 331697922 10365986 complement(4464648..4465268) 1 NC_015312.1 HAMAP: Potassium transporting ATPase, C subunit; KEGG: sen:SACE_6087 potassium-transporting ATPase C chain; PFAM: Potassium transporting ATPase, C subunit; potassium-transporting ATPase subunit C 4465268 10365986 Psed_4145 Pseudonocardia dioxanivorans CB1190 potassium-transporting ATPase subunit C YP_004334161.1 4464648 R 675635 CDS YP_004334162.1 331697923 10365987 complement(4465270..4467375) 1 NC_015312.1 PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: sen:SACE_6088 potassium-transporting ATPase B chain; potassium-transporting ATPase subunit B 4467375 10365987 Psed_4146 Pseudonocardia dioxanivorans CB1190 potassium-transporting ATPase subunit B YP_004334162.1 4465270 R 675635 CDS YP_004334163.1 331697924 10365988 complement(4467372..4469033) 1 NC_015312.1 PFAM: ATPase, K+ transporting, A subunit; TIGRFAM: ATPase, K+ transporting, A subunit; HAMAP: ATPase, K+ transporting, A subunit; KEGG: sen:SACE_6089 potassium-transporting ATPase subunit A; Potassium-transporting ATPase subunit A 4469033 10365988 Psed_4147 Pseudonocardia dioxanivorans CB1190 Potassium-transporting ATPase subunit A YP_004334163.1 4467372 R 675635 CDS YP_004334164.1 331697925 10365989 complement(4469033..4469134) 1 NC_015312.1 TIGRFAM: ATPase, P-type, K+-transporting, F subunit; PFAM: ATPase, P-type, K+-transporting, F subunit; K+-transporting ATPase subunit F 4469134 10365989 Psed_4148 Pseudonocardia dioxanivorans CB1190 K+-transporting ATPase subunit F YP_004334164.1 4469033 R 675635 CDS YP_004334165.1 331697926 10365990 complement(4469131..4469301) 1 NC_015312.1 hypothetical protein 4469301 10365990 Psed_4149 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334165.1 4469131 R 675635 CDS YP_004334166.1 331697927 10365991 complement(4469460..4470521) 1 NC_015312.1 KEGG: bra:BRADO2458 3-isopropylmalate dehydrogenase (LeuB); PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4470521 10365991 Psed_4150 Pseudonocardia dioxanivorans CB1190 3-isopropylmalate dehydrogenase YP_004334166.1 4469460 R 675635 CDS YP_004334167.1 331697928 10365992 complement(4470584..4471285) 1 NC_015312.1 KEGG: gbr:Gbro_2862 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 4471285 10365992 Psed_4151 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334167.1 4470584 R 675635 CDS YP_004334168.1 331697929 10365993 4471543..4472907 1 NC_015312.1 PFAM: Amidase; KEGG: rca:Rcas_2243 amidase; amidase 4472907 10365993 Psed_4152 Pseudonocardia dioxanivorans CB1190 amidase YP_004334168.1 4471543 D 675635 CDS YP_004334169.1 331697930 10365994 4472952..4474196 1 NC_015312.1 KEGG: sgr:SGR_5476 acyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 4474196 10365994 Psed_4153 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334169.1 4472952 D 675635 CDS YP_004334170.1 331697931 10365995 4474226..4475632 1 NC_015312.1 KEGG: ctc:CTC01781 phenylhydantoinase; PFAM: Amidohydrolase 1; dihydropyrimidinase 4475632 10365995 Psed_4154 Pseudonocardia dioxanivorans CB1190 dihydropyrimidinase YP_004334170.1 4474226 D 675635 CDS YP_004334171.1 331697932 10365996 4475638..4476327 1 NC_015312.1 KEGG: rxy:Rxyl_2747 N-carbamoylsarcosine amidase; PFAM: Isochorismatase-like; N-carbamoylsarcosine amidase 4476327 10365996 Psed_4155 Pseudonocardia dioxanivorans CB1190 N-carbamoylsarcosine amidase YP_004334171.1 4475638 D 675635 CDS YP_004334172.1 331697933 10365997 4476324..4477364 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: afw:Anae109_2774 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 4477364 10365997 Psed_4156 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004334172.1 4476324 D 675635 CDS YP_004334173.1 331697934 10365998 complement(4477446..4478633) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nca:Noca_0030 major facilitator transporter; major facilitator superfamily protein 4478633 10365998 Psed_4157 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334173.1 4477446 R 675635 CDS YP_004334174.1 331697935 10365999 4478864..4479853 1 NC_015312.1 KEGG: hvo:HVO_A0568 hydroxymethylglutaryl-CoA lyase; PFAM: Pyruvate carboxyltransferase; Hydroxymethylglutaryl-CoA lyase 4479853 10365999 Psed_4158 Pseudonocardia dioxanivorans CB1190 Hydroxymethylglutaryl-CoA lyase YP_004334174.1 4478864 D 675635 CDS YP_004334175.1 331697936 10366000 complement(4479895..4480911) 1 NC_015312.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: scl:sce2610 oxidoreductase; NADP-dependent oxidoreductase domain-containing protein 4480911 10366000 Psed_4159 Pseudonocardia dioxanivorans CB1190 NADP-dependent oxidoreductase domain-containing protein YP_004334175.1 4479895 R 675635 CDS YP_004334176.1 331697937 10366001 complement(4480908..4482080) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rfr:Rfer_4176 major facilitator transporter; major facilitator superfamily protein 4482080 10366001 Psed_4160 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334176.1 4480908 R 675635 CDS YP_004334177.1 331697938 10366002 complement(4482137..4483252) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease 4483252 10366002 Psed_4161 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334177.1 4482137 R 675635 CDS YP_004334178.1 331697939 10366003 complement(4483249..4484811) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: nca:Noca_0100 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 4484811 10366003 Psed_4162 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004334178.1 4483249 R 675635 CDS YP_004334179.1 331697940 10366004 complement(4484921..4486102) 1 NC_015312.1 KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein 4486102 10366004 Psed_4163 Pseudonocardia dioxanivorans CB1190 sugar ABC transporter substrate-binding protein YP_004334179.1 4484921 R 675635 CDS YP_004334180.1 331697941 10366005 complement(4486721..4488166) 1 NC_015312.1 KEGG: art:Arth_4066 dihydropyrimidinase; PFAM: Amidohydrolase 1; dihydropyrimidinase 4488166 10366005 Psed_4164 Pseudonocardia dioxanivorans CB1190 dihydropyrimidinase YP_004334180.1 4486721 R 675635 CDS YP_004334181.1 331697942 10366006 complement(4488179..4488916) 1 NC_015312.1 KEGG: bph:Bphy_6346 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 4488916 10366006 Psed_4165 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334181.1 4488179 R 675635 CDS YP_004334182.1 331697943 10366007 complement(4488973..4490250) 1 NC_015312.1 KEGG: bbr:BB0695 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; Cupin 2, conserved barrel; chitin deacetylase 4490250 10366007 Psed_4166 Pseudonocardia dioxanivorans CB1190 chitin deacetylase YP_004334182.1 4488973 R 675635 CDS YP_004334183.1 331697944 10366008 complement(4490247..4491041) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cti:RALTA_A2298 hydrolase; 3-oxoadipate enol-lactonase; alpha/beta hydrolase 4491041 10366008 Psed_4167 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334183.1 4490247 R 675635 CDS YP_004334184.1 331697945 10366009 complement(4491038..4491886) 1 NC_015312.1 KEGG: pth:PTH_1335 citrate lyase beta subunit; PFAM: Aldehyde-lyase domain; citryl-CoA lyase 4491886 10366009 Psed_4168 Pseudonocardia dioxanivorans CB1190 citryl-CoA lyase YP_004334184.1 4491038 R 675635 CDS YP_004334185.1 331697946 10366010 complement(4491883..4493565) 1 NC_015312.1 HAMAP: Dihydroxy-acid dehydratase; KEGG: rxy:Rxyl_1326 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 4493565 10366010 Psed_4169 Pseudonocardia dioxanivorans CB1190 dihydroxy-acid dehydratase YP_004334185.1 4491883 R 675635 CDS YP_004334186.1 331697947 10366011 complement(4493592..4494623) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease 4494623 10366011 Psed_4170 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334186.1 4493592 R 675635 CDS YP_004334187.1 331697948 10366012 complement(4494620..4496254) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: nca:Noca_0100 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 4496254 10366012 Psed_4171 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004334187.1 4494620 R 675635 CDS YP_004334188.1 331697949 10366013 complement(4496254..4497429) 1 NC_015312.1 KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein 4497429 10366013 Psed_4172 Pseudonocardia dioxanivorans CB1190 sugar ABC transporter substrate-binding protein YP_004334188.1 4496254 R 675635 CDS YP_004334189.1 331697950 10366014 complement(4497460..4498113) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: cag:Cagg_3089 N-carbamoylsarcosine amidase; isochorismatase hydrolase 4498113 10366014 Psed_4173 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004334189.1 4497460 R 675635 CDS YP_004334190.1 331697951 10366015 complement(4498125..4499321) 1 NC_015312.1 KEGG: rxy:Rxyl_0365 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 4499321 10366015 Psed_4174 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334190.1 4498125 R 675635 CDS YP_004334191.1 331697952 10366016 complement(4499467..4500408) 1 NC_015312.1 KEGG: bbr:BB0695 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; chitin deacetylase 4500408 10366016 Psed_4175 Pseudonocardia dioxanivorans CB1190 chitin deacetylase YP_004334191.1 4499467 R 675635 CDS YP_004334192.1 331697953 10366017 complement(4500530..4501204) 1 NC_015312.1 KEGG: msm:MSMEG_6300 transcriptional regulator, GntR family protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4501204 10366017 Psed_4176 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334192.1 4500530 R 675635 CDS YP_004334193.1 331697954 10366018 complement(4501671..4502438) 1 NC_015312.1 KEGG: amd:AMED_5017 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4502438 10366018 Psed_4177 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004334193.1 4501671 R 675635 CDS YP_004334194.1 331697955 10366019 4502479..4503384 1 NC_015312.1 SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Acetaldehyde dehydrogenase; KEGG: amd:AMED_4219 acetaldehyde dehydrogenase; PFAM: Acetaldehyde dehydrogenase, C-terminal; Semialdehyde dehydrogenase, NAD-binding; acetaldehyde dehydrogenase 4503384 10366019 Psed_4178 Pseudonocardia dioxanivorans CB1190 acetaldehyde dehydrogenase YP_004334194.1 4502479 D 675635 CDS YP_004334195.1 331697956 10366020 4503381..4504415 1 NC_015312.1 TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; KEGG: amd:AMED_4220 4-hydroxy-2-ketovalerate aldolase; PFAM: Pyruvate carboxyltransferase; DmpG-like communication; 4-hydroxy-2-oxovalerate aldolase 4504415 10366020 Psed_4179 Pseudonocardia dioxanivorans CB1190 4-hydroxy-2-oxovalerate aldolase YP_004334195.1 4503381 D 675635 CDS YP_004334196.1 331697957 10366021 complement(4504935..4505204) 1 NC_015312.1 hypothetical protein 4505204 10366021 Psed_4180 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334196.1 4504935 R 675635 CDS YP_004334197.1 331697958 10366022 complement(4505201..4506316) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: mau:Micau_3737 methyltransferase; type 11 methyltransferase 4506316 10366022 Psed_4181 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004334197.1 4505201 R 675635 CDS YP_004334198.1 331697959 10366023 complement(4506338..4507207) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mau:Micau_3745 alpha/beta hydrolase fold protein; alpha/beta hydrolase 4507207 10366023 Psed_4182 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334198.1 4506338 R 675635 CDS YP_004334199.1 331697960 10366024 complement(4507204..4508586) 1 NC_015312.1 PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: mau:Micau_3744 peptidase M20; peptidase M20 4508586 10366024 Psed_4183 Pseudonocardia dioxanivorans CB1190 peptidase M20 YP_004334199.1 4507204 R 675635 CDS YP_004334200.1 331697961 10366025 complement(4508580..4511453) 1 NC_015312.1 KEGG: mau:Micau_3736 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; NADPH dehydrogenase 4511453 10366025 Psed_4184 Pseudonocardia dioxanivorans CB1190 NADPH dehydrogenase YP_004334200.1 4508580 R 675635 CDS YP_004334201.1 331697962 10366026 4511626..4512480 1 NC_015312.1 KEGG: rxy:Rxyl_0364 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4512480 10366026 Psed_4185 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004334201.1 4511626 D 675635 CDS YP_004334202.1 331697963 10366027 4512723..4514744 1 NC_015312.1 KEGG: mil:ML5_4663 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 2,4-dienoyl-CoA reductase 4514744 10366027 Psed_4186 Pseudonocardia dioxanivorans CB1190 2,4-dienoyl-CoA reductase YP_004334202.1 4512723 D 675635 CDS YP_004334203.1 331697964 10366028 4514873..4515955 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: mau:Micau_3737 methyltransferase; type 11 methyltransferase 4515955 10366028 Psed_4187 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004334203.1 4514873 D 675635 CDS YP_004334204.1 331697965 10366029 4515955..4516266 1 NC_015312.1 KEGG: mil:ML5_4661 hypothetical protein; hypothetical protein 4516266 10366029 Psed_4188 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334204.1 4515955 D 675635 CDS YP_004334205.1 331697966 10366030 4516266..4516679 1 NC_015312.1 KEGG: mil:ML5_4660 hypothetical protein; hypothetical protein 4516679 10366030 Psed_4189 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334205.1 4516266 D 675635 CDS YP_004334206.1 331697967 10366031 4516676..4517803 1 NC_015312.1 KEGG: mil:ML5_4659 nmt1/thi5 like domain protein; nmt1/thi5 like domain-containing protein 4517803 10366031 Psed_4190 Pseudonocardia dioxanivorans CB1190 nmt1/thi5 like domain-containing protein YP_004334206.1 4516676 D 675635 CDS YP_004334207.1 331697968 10366032 4517851..4518681 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: mil:ML5_4658 abc transporter related protein; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 4518681 10366032 Psed_4191 Pseudonocardia dioxanivorans CB1190 taurine-transporting AtPase YP_004334207.1 4517851 D 675635 CDS YP_004334208.1 331697969 10366033 4518712..4519578 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mil:ML5_4657 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 4519578 10366033 Psed_4192 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334208.1 4518712 D 675635 CDS YP_004334209.1 331697970 10366034 4519575..4520324 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mil:ML5_4656 short-chain dehydrogenase/reductase sdr; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 4520324 10366034 Psed_4193 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004334209.1 4519575 D 675635 CDS YP_004334210.1 331697971 10366035 4520368..4521786 1 NC_015312.1 PFAM: Peptidase M20, dimerisation; Peptidase M20; KEGG: mil:ML5_4655 peptidase M20; peptidase dimerization domain-containing protein 4521786 10366035 Psed_4194 Pseudonocardia dioxanivorans CB1190 peptidase dimerization domain-containing protein YP_004334210.1 4520368 D 675635 CDS YP_004334211.1 331697972 10366036 4521783..4522613 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mau:Micau_3745 alpha/beta hydrolase fold protein; alpha/beta hydrolase 4522613 10366036 Psed_4195 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334211.1 4521783 D 675635 CDS YP_004334212.1 331697973 10366037 4522610..4523050 1 NC_015312.1 KEGG: mil:ML5_4653 peroxiredoxin, ohr subfamily; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein; peroxiredoxin 4523050 10366037 Psed_4196 Pseudonocardia dioxanivorans CB1190 peroxiredoxin YP_004334212.1 4522610 D 675635 CDS YP_004334213.1 331697974 10366038 4523047..4523910 1 NC_015312.1 KEGG: mil:ML5_4651 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4523910 10366038 Psed_4197 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004334213.1 4523047 D 675635 CDS YP_004334214.1 331697975 10366039 4523907..4525175 1 NC_015312.1 KEGG: mau:Micau_3749 formyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 4525175 10366039 Psed_4198 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334214.1 4523907 D 675635 CDS YP_004334215.1 331697976 10366040 4525204..4526046 1 NC_015312.1 PFAM: cyclase; KEGG: nca:Noca_4084 cyclase protein; cyclase 4526046 10366040 Psed_4199 Pseudonocardia dioxanivorans CB1190 cyclase YP_004334215.1 4525204 D 675635 CDS YP_004334216.1 331697977 10366041 4526039..4527487 1 NC_015312.1 PFAM: MmgE/PrpD; KEGG: mil:ML5_4648 MmgE/PrpD family protein; MmgE/PrpD family protein 4527487 10366041 Psed_4200 Pseudonocardia dioxanivorans CB1190 MmgE/PrpD family protein YP_004334216.1 4526039 D 675635 CDS YP_004334217.1 331697978 10366042 4527490..4528956 1 NC_015312.1 KEGG: mil:ML5_4647 amidohydrolase; PFAM: Amidohydrolase 1; allantoinase 4528956 10366042 Psed_4201 Pseudonocardia dioxanivorans CB1190 allantoinase YP_004334217.1 4527490 D 675635 CDS YP_004334218.1 331697979 10366043 4528962..4529819 1 NC_015312.1 PFAM: Aldehyde-lyase domain; KEGG: mau:Micau_3753 HpcH/HpaI aldolase; HpcH/HpaI aldolase 4529819 10366043 Psed_4202 Pseudonocardia dioxanivorans CB1190 HpcH/HpaI aldolase YP_004334218.1 4528962 D 675635 CDS YP_004334219.1 331697980 10366044 4529895..4530278 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 4530278 10366044 Psed_4203 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004334219.1 4529895 D 675635 CDS YP_004334220.1 331697981 10366045 4530335..4530757 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kra:Krad_4270 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4530757 10366045 Psed_4204 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004334220.1 4530335 D 675635 CDS YP_004334221.1 331697982 10366046 complement(4530764..4531366) 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: has:Halsa_0298 nitroreductase; nitroreductase 4531366 10366046 Psed_4205 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004334221.1 4530764 R 675635 CDS YP_004334222.1 331697983 10366047 complement(4531363..4531692) 1 NC_015312.1 hypothetical protein 4531692 10366047 Psed_4206 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334222.1 4531363 R 675635 CDS YP_004334223.1 331697984 10366048 4532171..4533193 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: sti:Sthe_0116 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 4533193 10366048 Psed_4207 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004334223.1 4532171 D 675635 CDS YP_004334224.1 331697985 10366049 4533202..4533558 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tbi:Tbis_1970 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 4533558 10366049 Psed_4208 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004334224.1 4533202 D 675635 CDS YP_004334225.1 331697986 10366050 4533599..4534030 1 NC_015312.1 KEGG: nda:Ndas_1607 F420-dependent enzyme; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 4534030 10366050 Psed_4209 Pseudonocardia dioxanivorans CB1190 F420-dependent protein YP_004334225.1 4533599 D 675635 CDS YP_004334226.1 331697987 10366051 complement(4534027..4535130) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: kfl:Kfla_4810 major facilitator superfamily MFS_1; major facilitator superfamily protein 4535130 10366051 Psed_4210 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334226.1 4534027 R 675635 CDS YP_004334227.1 331697988 10366052 complement(4535271..4536041) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rha:RHA1_ro00483 TetR family transcriptional regulator; TetR family transcriptional regulator 4536041 10366052 Psed_4211 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334227.1 4535271 R 675635 CDS YP_004334228.1 331697989 10366053 complement(4536114..4537508) 1 NC_015312.1 TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; KEGG: fre:Franean1_5222 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tyrosyl-tRNA synthetase 4537508 10366053 Psed_4212 Pseudonocardia dioxanivorans CB1190 tyrosyl-tRNA synthetase YP_004334228.1 4536114 R 675635 CDS YP_004334229.1 331697990 10366054 4537646..4538509 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sgr:SGR_1000 hydrolase; alpha/beta hydrolase 4538509 10366054 Psed_4213 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334229.1 4537646 D 675635 CDS YP_004334230.1 331697991 10366055 complement(4538601..4539749) 1 NC_015312.1 KEGG: rop:ROP_28170 CaiB/BaiF family protein; PFAM: CoA-transferase III; formyl-CoA transferase 4539749 10366055 Psed_4214 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334230.1 4538601 R 675635 CDS YP_004334231.1 331697992 10366056 4539813..4540370 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: fre:Franean1_3648 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 4540370 10366056 Psed_4215 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004334231.1 4539813 D 675635 CDS YP_004334232.1 331697993 10366058 4540715..4541371 1 NC_015312.1 PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 4541371 10366058 Psed_4216 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004334232.1 4540715 D 675635 CDS YP_004334233.1 331697994 10366059 4541511..4541813 1 NC_015312.1 hypothetical protein 4541813 10366059 Psed_4217 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334233.1 4541511 D 675635 CDS YP_004334234.1 331697995 10366060 complement(4541873..4543483) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: sen:SACE_3057 pentachlorophenol monooxygenase; monooxygenase FAD-binding protein 4543483 10366060 Psed_4218 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004334234.1 4541873 R 675635 CDS YP_004334235.1 331697996 10366061 complement(4543517..4544476) 1 NC_015312.1 KEGG: amd:AMED_5254 beta-lactamase class B; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4544476 10366061 Psed_4219 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004334235.1 4543517 R 675635 CDS YP_004334236.1 331697997 10366062 4544691..4545689 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: hje:HacjB3_02270 luciferase-like monooxygenase; luciferase-like protein 4545689 10366062 Psed_4220 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004334236.1 4544691 D 675635 CDS YP_004334237.1 331697998 10366063 4545783..4547426 1 NC_015312.1 KEGG: mbt:JTY_1088 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 4547426 10366063 Psed_4221 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004334237.1 4545783 D 675635 CDS YP_004334238.1 331697999 10366064 4547561..4548940 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nda:Ndas_2798 metabolite/H+ symporter, major facilitator superfamily (MFS); major facilitator superfamily protein 4548940 10366064 Psed_4222 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334238.1 4547561 D 675635 CDS YP_004334239.1 331698000 10366065 4549010..4549489 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: gbr:Gbro_0274 helix-turn-helix domain-containing protein; HxlR family transcriptional regulator 4549489 10366065 Psed_4223 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004334239.1 4549010 D 675635 CDS YP_004334240.1 331698001 10366066 4549660..4550166 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: sma:SAV_7402 cyclase/dehydrase; polyketide cyclase/dehydrase 4550166 10366066 Psed_4224 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004334240.1 4549660 D 675635 CDS YP_004334241.1 331698002 10366067 4550166..4551209 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: amd:AMED_7646 FMN-dependent monooxygenase; luciferase-like protein 4551209 10366067 Psed_4225 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004334241.1 4550166 D 675635 CDS YP_004334242.1 331698003 10366069 4551602..4552147 1 NC_015312.1 KEGG: rop:ROP_04590 hypothetical protein; hypothetical protein 4552147 10366069 Psed_4227 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334242.1 4551602 D 675635 CDS YP_004334243.1 331698004 10366070 4552193..4552672 1 NC_015312.1 PFAM: Protein of unknown function DUF421; KEGG: rop:ROP_04580 hypothetical membrane protein; hypothetical protein 4552672 10366070 Psed_4228 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334243.1 4552193 D 675635 CDS YP_004334244.1 331698005 10366071 4552733..4555186 1 NC_015312.1 KEGG: nda:Ndas_4662 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; nitrate reductase 4555186 10366071 Psed_4229 Pseudonocardia dioxanivorans CB1190 nitrate reductase YP_004334244.1 4552733 D 675635 CDS YP_004334245.1 331698006 10366072 4555183..4555665 1 NC_015312.1 KEGG: amd:AMED_6557 hypothetical protein; hypothetical protein 4555665 10366072 Psed_4230 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334245.1 4555183 D 675635 CDS YP_004334246.1 331698007 10366073 4555742..4556593 1 NC_015312.1 KEGG: cwo:Cwoe_0784 PGAP1 family protein; PGAP1 family protein 4556593 10366073 Psed_4231 Pseudonocardia dioxanivorans CB1190 PGAP1 family protein YP_004334246.1 4555742 D 675635 CDS YP_004334247.1 331698008 10366074 4556628..4557617 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mil:ML5_3028 short-chain dehydrogenase/reductase sdr; short-chain dehydrogenase/reductase SDR 4557617 10366074 Psed_4232 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004334247.1 4556628 D 675635 CDS YP_004334248.1 331698009 10366075 complement(4557680..4558927) 1 NC_015312.1 KEGG: ami:Amir_3121 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase 4558927 10366075 Psed_4233 Pseudonocardia dioxanivorans CB1190 Ser/Thr phosphatase YP_004334248.1 4557680 R 675635 CDS YP_004334249.1 331698010 10366076 4559178..4559666 1 NC_015312.1 KEGG: amd:AMED_4259 hypothetical protein; hypothetical protein 4559666 10366076 Psed_4234 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334249.1 4559178 D 675635 CDS YP_004334250.1 331698011 10366077 complement(4559850..4561196) 1 NC_015312.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: amd:AMED_3149 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 4561196 10366077 Psed_4235 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004334250.1 4559850 R 675635 CDS YP_004334251.1 331698012 10366078 4561551..4562729 1 NC_015312.1 KEGG: bwe:BcerKBAB4_5427 ATPase; hypothetical protein 4562729 10366078 Psed_4236 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334251.1 4561551 D 675635 CDS YP_004334252.1 331698013 10366079 4562780..4563724 1 NC_015312.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rop:ROP_pKNR-00040 plasmid partitioning protein ParA; Cobyrinic acid ac-diamide synthase 4563724 10366079 Psed_4237 Pseudonocardia dioxanivorans CB1190 Cobyrinic acid ac-diamide synthase YP_004334252.1 4562780 D 675635 CDS YP_004334253.1 331698014 10366080 4563721..4564380 1 NC_015312.1 hypothetical protein 4564380 10366080 Psed_4238 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334253.1 4563721 D 675635 CDS YP_004334254.1 331698015 10366081 4564465..4564836 1 NC_015312.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: amd:AMED_5888 anti-anti-sigma factor; sulfate transporter/antisigma-factor antagonist STAS 4564836 10366081 Psed_4239 Pseudonocardia dioxanivorans CB1190 sulfate transporter/antisigma-factor antagonist STAS YP_004334254.1 4564465 D 675635 CDS YP_004334255.1 331698016 10366082 4564840..4566441 1 NC_015312.1 KEGG: amd:AMED_5889 GAF domain-containing serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; SMART: Protein phosphatase 2C-like; GAF; GAF sensor-containing protein serine/threonine phosphatase 4566441 10366082 Psed_4240 Pseudonocardia dioxanivorans CB1190 GAF sensor-containing protein serine/threonine phosphatase YP_004334255.1 4564840 D 675635 CDS YP_004334256.1 331698017 10366083 complement(4566526..4566825) 1 NC_015312.1 KEGG: sen:SACE_0974 gas vesicle synthesis-like protein; HAMAP: Gas vesicle structural protein; PFAM: Gas vesicle protein GvpA; gas vesicle structural protein 4566825 10366083 Psed_4241 Pseudonocardia dioxanivorans CB1190 gas vesicle structural protein YP_004334256.1 4566526 R 675635 CDS YP_004334257.1 331698018 10366084 complement(4566955..4567386) 1 NC_015312.1 PFAM: Domain of unknown function DUF336; KEGG: pzu:PHZ_c2132 hypothetical protein; hypothetical protein 4567386 10366084 Psed_4242 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334257.1 4566955 R 675635 CDS YP_004334258.1 331698019 10366085 4567672..4568550 1 NC_015312.1 PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal; KEGG: sen:SACE_3137 repressor in the phenylacetic acid catabolism; PaaX family transcriptional regulator 4568550 10366085 Psed_4243 Pseudonocardia dioxanivorans CB1190 PaaX family transcriptional regulator YP_004334258.1 4567672 D 675635 CDS YP_004334259.1 331698020 10366086 complement(4568575..4569300) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: aci:ACIAD1426 salicylate esterase; alpha/beta hydrolase 4569300 10366086 Psed_4244 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334259.1 4568575 R 675635 CDS YP_004334260.1 331698021 10366087 complement(4569456..4570373) 1 NC_015312.1 KEGG: xce:Xcel_0312 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 4570373 10366087 Psed_4245 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004334260.1 4569456 R 675635 CDS YP_004334261.1 331698022 10366088 complement(4570417..4572084) 1 NC_015312.1 KEGG: amd:AMED_3360 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; Benzoate--CoA ligase 4572084 10366088 Psed_4246 Pseudonocardia dioxanivorans CB1190 Benzoate--CoA ligase YP_004334261.1 4570417 R 675635 CDS YP_004334262.1 331698023 10366089 complement(4572081..4573088) 1 NC_015312.1 KEGG: bgf:BC1003_4453 nitrilase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase 4573088 10366089 Psed_4247 Pseudonocardia dioxanivorans CB1190 nitrilase YP_004334262.1 4572081 R 675635 CDS YP_004334263.1 331698024 10366090 complement(4573094..4575340) 1 NC_015312.1 KEGG: nfa:nfa12450 salicylyl-CoA 5-hydroxylase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADPH dehydrogenase 4575340 10366090 Psed_4248 Pseudonocardia dioxanivorans CB1190 NADPH dehydrogenase YP_004334263.1 4573094 R 675635 CDS YP_004334264.1 331698025 10366091 4575444..4576556 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: bgf:BC1003_4454 cupin 2 conserved barrel domain-containing protein; cupin 4576556 10366091 Psed_4249 Pseudonocardia dioxanivorans CB1190 cupin YP_004334264.1 4575444 D 675635 CDS YP_004334265.1 331698026 10366092 4576570..4577406 1 NC_015312.1 KEGG: swi:Swit_0820 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 4577406 10366092 Psed_4250 Pseudonocardia dioxanivorans CB1190 ureidoglycolate lyase YP_004334265.1 4576570 D 675635 CDS YP_004334266.1 331698027 10366093 4577403..4578200 1 NC_015312.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: apt:APA01_23730 Asp/Glu racemase; Asp/Glu/hydantoin racemase 4578200 10366093 Psed_4251 Pseudonocardia dioxanivorans CB1190 Asp/Glu/hydantoin racemase YP_004334266.1 4577403 D 675635 CDS YP_004334267.1 331698028 10366094 4578197..4578637 1 NC_015312.1 PFAM: Thioesterase superfamily; KEGG: aau:AAur_4027 thioesterase protein; thioesterase 4578637 10366094 Psed_4252 Pseudonocardia dioxanivorans CB1190 thioesterase YP_004334267.1 4578197 D 675635 CDS YP_004334268.1 331698029 10366095 complement(4578613..4579965) 1 NC_015312.1 KEGG: cai:Caci_6602 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; beta-Ala-His dipeptidase 4579965 10366095 Psed_4253 Pseudonocardia dioxanivorans CB1190 beta-Ala-His dipeptidase YP_004334268.1 4578613 R 675635 CDS YP_004334269.1 331698030 10366096 complement(4580198..4580503) 1 NC_015312.1 hypothetical protein 4580503 10366096 Psed_4254 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334269.1 4580198 R 675635 CDS YP_004334270.1 331698031 10366097 complement(4580523..4580747) 1 NC_015312.1 hypothetical protein 4580747 10366097 Psed_4255 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334270.1 4580523 R 675635 CDS YP_004334271.1 331698032 10366098 complement(4580839..4583397) 1 NC_015312.1 KEGG: amd:AMED_3903 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: Transcription regulator LuxR, C-terminal; ATPase, AAA+ type, core; LuxR family transcriptional regulator 4583397 10366098 Psed_4256 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334271.1 4580839 R 675635 CDS YP_004334272.1 331698033 10366099 complement(4583450..4586062) 1 NC_015312.1 KEGG: amd:AMED_3903 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4586062 10366099 Psed_4257 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334272.1 4583450 R 675635 CDS YP_004334273.1 331698034 10366100 4586223..4586492 1 NC_015312.1 hypothetical protein 4586492 10366100 Psed_4258 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334273.1 4586223 D 675635 CDS YP_004334274.1 331698035 10366101 complement(4586576..4587793) 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0118; KEGG: amd:AMED_3910 hypothetical protein; hypothetical protein 4587793 10366101 Psed_4259 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334274.1 4586576 R 675635 CDS YP_004334275.1 331698036 10366102 complement(4587851..4589131) 1 NC_015312.1 PFAM: Diacylglycerol kinase, catalytic domain; KEGG: fal:FRAAL5417 hypothetical protein; diacylglycerol kinase catalytic subunit 4589131 10366102 Psed_4260 Pseudonocardia dioxanivorans CB1190 diacylglycerol kinase catalytic subunit YP_004334275.1 4587851 R 675635 CDS YP_004334276.1 331698037 10366103 complement(4589236..4589655) 1 NC_015312.1 KEGG: sen:SACE_3236 integral membrane protein; hypothetical protein 4589655 10366103 Psed_4261 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334276.1 4589236 R 675635 CDS YP_004334277.1 331698038 10366104 complement(4589652..4590167) 1 NC_015312.1 PFAM: RDD; KEGG: rop:ROP_35210 hypothetical membrane protein; RDD domain-containing protein 4590167 10366104 Psed_4262 Pseudonocardia dioxanivorans CB1190 RDD domain-containing protein YP_004334277.1 4589652 R 675635 CDS YP_004334278.1 331698039 10366105 complement(4590194..4591033) 1 NC_015312.1 KEGG: nml:Namu_5192 hypothetical protein; hypothetical protein 4591033 10366105 Psed_4263 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334278.1 4590194 R 675635 CDS YP_004334279.1 331698040 10366106 4591187..4592155 1 NC_015312.1 KEGG: mar:MAE_61320 hypothetical protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related; polyphosphate:nucleotide phosphotransferase 4592155 10366106 Psed_4264 Pseudonocardia dioxanivorans CB1190 polyphosphate:nucleotide phosphotransferase YP_004334279.1 4591187 D 675635 CDS YP_004334280.1 331698041 10366107 4592169..4594889 1 NC_015312.1 SMART: ATPase, P-type cation-transporter, N-terminal; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: nml:Namu_4121 ATPase; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; ATPase 4594889 10366107 Psed_4265 Pseudonocardia dioxanivorans CB1190 ATPase YP_004334280.1 4592169 D 675635 CDS YP_004334281.1 331698042 10366108 4594886..4596646 1 NC_015312.1 KEGG: nml:Namu_3444 sulfate transporter; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter 4596646 10366108 Psed_4266 Pseudonocardia dioxanivorans CB1190 sulfate transporter YP_004334281.1 4594886 D 675635 CDS YP_004334282.1 331698043 10366109 4596724..4597608 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 4597608 10366109 Psed_4267 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004334282.1 4596724 D 675635 CDS YP_004334283.1 331698044 10366110 complement(4597763..4598287) 1 NC_015312.1 PFAM: Uncharacterised conserved protein UCP014873, membrane associated; KEGG: nfa:nfa32860 hypothetical protein; hypothetical protein 4598287 10366110 Psed_4268 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334283.1 4597763 R 675635 CDS YP_004334284.1 331698045 10366111 4598512..4599003 1 NC_015312.1 PFAM: Ion transport 2; KEGG: nml:Namu_2957 ion transport 2 domain-containing protein; Ion transport 2 domain-containing protein 4599003 10366111 Psed_4269 Pseudonocardia dioxanivorans CB1190 Ion transport 2 domain-containing protein YP_004334284.1 4598512 D 675635 CDS YP_004334285.1 331698046 10366112 4599206..4599757 1 NC_015312.1 KEGG: cai:Caci_6592 hypothetical protein; hypothetical protein 4599757 10366112 Psed_4270 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334285.1 4599206 D 675635 CDS YP_004334286.1 331698047 10366113 4599938..4600312 1 NC_015312.1 hypothetical protein 4600312 10366113 Psed_4271 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334286.1 4599938 D 675635 CDS YP_004334287.1 331698048 10366114 4600309..4600473 1 NC_015312.1 hypothetical protein 4600473 10366114 Psed_4272 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334287.1 4600309 D 675635 CDS YP_004334288.1 331698049 10366115 complement(4600476..4600988) 1 NC_015312.1 hypothetical protein 4600988 10366115 Psed_4273 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334288.1 4600476 R 675635 CDS YP_004334289.1 331698050 10366116 complement(4600985..4601548) 1 NC_015312.1 KEGG: nfa:nfa23360 hypothetical protein; hypothetical protein 4601548 10366116 Psed_4274 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334289.1 4600985 R 675635 CDS YP_004334290.1 331698051 10366117 complement(4601539..4602213) 1 NC_015312.1 KEGG: amd:AMED_9148 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4602213 10366117 Psed_4275 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004334290.1 4601539 R 675635 CDS YP_004334291.1 331698052 10366118 complement(4602827..4603357) 1 NC_015312.1 KEGG: nml:Namu_0789 hypothetical protein; hypothetical protein 4603357 10366118 Psed_4276 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334291.1 4602827 R 675635 CDS YP_004334292.1 331698053 10366119 4603510..4604892 1 NC_015312.1 KEGG: sma:SAV_1927 integral membrane protein; hypothetical protein 4604892 10366119 Psed_4277 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334292.1 4603510 D 675635 CDS YP_004334293.1 331698054 10366120 4604892..4605455 1 NC_015312.1 TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: mjl:Mjls_3183 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 4605455 10366120 Psed_4278 Pseudonocardia dioxanivorans CB1190 metal dependent phosphohydrolase YP_004334293.1 4604892 D 675635 CDS YP_004334294.1 331698055 10366121 4605490..4606977 1 NC_015312.1 PFAM: Protein of unknown function DUF2252; KEGG: sgr:SGR_6314 hypothetical protein; hypothetical protein 4606977 10366121 Psed_4279 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334294.1 4605490 D 675635 CDS YP_004334295.1 331698056 10366122 complement(4607317..4608666) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rop:ROP_33170 vanillate transporter; major facilitator superfamily protein 4608666 10366122 Psed_4280 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334295.1 4607317 R 675635 CDS YP_004334296.1 331698057 10366123 complement(4608781..4610304) 1 NC_015312.1 KEGG: gob:Gobs_2395 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; aldehyde dehydrogenase 4610304 10366123 Psed_4281 Pseudonocardia dioxanivorans CB1190 aldehyde dehydrogenase YP_004334296.1 4608781 R 675635 CDS YP_004334297.1 331698058 10366124 complement(4610364..4610705) 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: ace:Acel_0499 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 4610705 10366124 Psed_4282 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004334297.1 4610364 R 675635 CDS YP_004334298.1 331698059 10366125 complement(4610723..4611727) 1 NC_015312.1 HAMAP: Ferredoxin--NADP reductase, type 2; KEGG: mil:ML5_1109 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin-NADP reductase 4611727 10366125 Psed_4283 Pseudonocardia dioxanivorans CB1190 ferredoxin-NADP reductase YP_004334298.1 4610723 R 675635 CDS YP_004334299.1 331698060 10366126 complement(4611724..4612797) 1 NC_015312.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: nca:Noca_2142 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B 4612797 10366126 Psed_4284 Pseudonocardia dioxanivorans CB1190 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004334299.1 4611724 R 675635 CDS YP_004334300.1 331698061 10366127 4612931..4613764 1 NC_015312.1 KEGG: ajs:Ajs_4284 hydratase/decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase 4613764 10366127 Psed_4285 Pseudonocardia dioxanivorans CB1190 2-oxopent-4-enoate hydratase YP_004334300.1 4612931 D 675635 CDS YP_004334301.1 331698062 10366128 complement(4613780..4614568) 1 NC_015312.1 KEGG: nfa:nfa33170 transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4614568 10366128 Psed_4286 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004334301.1 4613780 R 675635 CDS YP_004334302.1 331698063 10366129 complement(4614579..4615868) 1 NC_015312.1 KEGG: ppf:Pput_2898 ring hydroxylating dioxygenase, alpha subunit; PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal; Rieske [2Fe-2S] iron-sulphur domain; 2-chlorobenzoate 1,2-dioxygenase 4615868 10366129 Psed_4287 Pseudonocardia dioxanivorans CB1190 2-chlorobenzoate 1,2-dioxygenase YP_004334302.1 4614579 R 675635 CDS YP_004334303.1 331698064 10366130 complement(4615885..4616868) 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: bam:Bamb_4307 aminocarboxymuconate-semialdehyde decarboxylase; amidohydrolase 4616868 10366130 Psed_4288 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004334303.1 4615885 R 675635 CDS YP_004334304.1 331698065 10366131 complement(4616879..4617391) 1 NC_015312.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: rop:ROP_46330 p-cumate dioxygenase small subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 4617391 10366131 Psed_4289 Pseudonocardia dioxanivorans CB1190 aromatic-ring-hydroxylating dioxygenase subunit beta YP_004334304.1 4616879 R 675635 CDS YP_004334305.1 331698066 10366132 complement(4617388..4618092) 1 NC_015312.1 KEGG: sen:SACE_3295 alpha/beta hydrolase; alpha/beta hydrolase 4618092 10366132 Psed_4290 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334305.1 4617388 R 675635 CDS YP_004334306.1 331698067 10366133 complement(4618089..4618304) 1 NC_015312.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: rop:ROP_54160 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 4618304 10366133 Psed_4291 Pseudonocardia dioxanivorans CB1190 4-oxalocrotonate tautomerase YP_004334306.1 4618089 R 675635 CDS YP_004334307.1 331698068 10366134 complement(4618317..4619087) 1 NC_015312.1 KEGG: tcu:Tcur_0537 4-oxalocrotonate decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like; 4-oxalocrotonate decarboxylase 4619087 10366134 Psed_4292 Pseudonocardia dioxanivorans CB1190 4-oxalocrotonate decarboxylase YP_004334307.1 4618317 R 675635 CDS YP_004334308.1 331698069 10366135 complement(4619084..4619893) 1 NC_015312.1 KEGG: amd:AMED_8623 2-keto-4-pentenoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase 4619893 10366135 Psed_4293 Pseudonocardia dioxanivorans CB1190 2-oxopent-4-enoate hydratase YP_004334308.1 4619084 R 675635 CDS YP_004334309.1 331698070 10366136 complement(4619969..4620502) 1 NC_015312.1 PFAM: Protein of unknown function DUF421; KEGG: aai:AARI_18290 hypothetical protein; hypothetical protein 4620502 10366136 Psed_4294 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334309.1 4619969 R 675635 CDS YP_004334310.1 331698071 10366137 complement(4620647..4621447) 1 NC_015312.1 KEGG: cai:Caci_3623 hypothetical protein; hypothetical protein 4621447 10366137 Psed_4295 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334310.1 4620647 R 675635 CDS YP_004334311.1 331698072 10366138 4621619..4622221 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_1039 transcriptional regulator, TetR family; TetR family transcriptional regulator 4622221 10366138 Psed_4296 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334311.1 4621619 D 675635 CDS YP_004334312.1 331698073 10366139 4622332..4627443 1 NC_015312.1 PFAM: Hedgehog, N-terminal signaling domain; KEGG: lpa:lpa_01031 hypothetical protein; hypothetical protein 4627443 10366139 Psed_4297 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334312.1 4622332 D 675635 CDS YP_004334313.1 331698074 10366140 4627617..4628105 1 NC_015312.1 KEGG: cms:CMS_1406 phosphatase; phosphatase 4628105 10366140 Psed_4298 Pseudonocardia dioxanivorans CB1190 phosphatase YP_004334313.1 4627617 D 675635 CDS YP_004334314.1 331698075 10366141 complement(4628125..4629351) 1 NC_015312.1 KEGG: bcv:Bcav_2807 major facilitator superfamily MFS_1; manually curated; PFAM: Major facilitator superfamily MFS-1; major facilitator superfamily protein 4629351 10366141 Psed_4299 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334314.1 4628125 R 675635 CDS YP_004334315.1 331698076 10366142 4629552..4633256 1 NC_015312.1 SMART: Molybdopterin oxidoreductase, Fe4S4 domain; TIGRFAM: Nitrate reductase, alpha subunit; KEGG: req:REQ_04230 nitrate reductase alpha subunit NarG; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; nitrate reductase subunit alpha 4633256 10366142 Psed_4300 Pseudonocardia dioxanivorans CB1190 nitrate reductase subunit alpha YP_004334315.1 4629552 D 675635 CDS YP_004334316.1 331698077 10366143 4633259..4635001 1 NC_015312.1 KEGG: gbr:Gbro_3700 nitrate reductase subunit beta; TIGRFAM: Nitrate reductase, beta subunit; nitrate reductase subunit beta 4635001 10366143 Psed_4301 Pseudonocardia dioxanivorans CB1190 nitrate reductase subunit beta YP_004334316.1 4633259 D 675635 CDS YP_004334317.1 331698078 10366144 4634998..4635642 1 NC_015312.1 KEGG: sro:Sros_1922 nitrate reductase delta subunit protein; TIGRFAM: Nitrate reductase chaperone, NarJ; PFAM: DMSO/Nitrate reductase chaperone; nitrate reductase molybdenum cofactor assembly chaperone 4635642 10366144 Psed_4302 Pseudonocardia dioxanivorans CB1190 nitrate reductase molybdenum cofactor assembly chaperone YP_004334317.1 4634998 D 675635 CDS YP_004334318.1 331698079 10366145 4635639..4636373 1 NC_015312.1 TIGRFAM: Nitrate reductase, gamma subunit; KEGG: nml:Namu_3672 respiratory nitrate reductase subunit gamma; PFAM: Nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma 4636373 10366145 Psed_4303 Pseudonocardia dioxanivorans CB1190 respiratory nitrate reductase subunit gamma YP_004334318.1 4635639 D 675635 CDS YP_004334319.1 331698080 10366146 complement(4636394..4637287) 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 4637287 10366146 Psed_4304 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004334319.1 4636394 R 675635 CDS YP_004334320.1 331698081 10366147 complement(4637745..4638002) 1 NC_015312.1 KEGG: cai:Caci_0200 Clp domain protein; Clp domain-containing protein 4638002 10366147 Psed_4305 Pseudonocardia dioxanivorans CB1190 Clp domain-containing protein YP_004334320.1 4637745 R 675635 CDS YP_004334321.1 331698082 10366148 4638212..4638514 1 NC_015312.1 hypothetical protein 4638514 10366148 Psed_4306 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334321.1 4638212 D 675635 CDS YP_004334322.1 331698083 10366149 4638710..4640551 1 NC_015312.1 PFAM: Phosphoesterase; KEGG: amd:AMED_7590 phospholipase C; phosphoesterase 4640551 10366149 Psed_4307 Pseudonocardia dioxanivorans CB1190 phosphoesterase YP_004334322.1 4638710 D 675635 CDS YP_004334323.1 331698084 10366150 complement(4640772..4641170) 1 NC_015312.1 hypothetical protein 4641170 10366150 Psed_4308 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334323.1 4640772 R 675635 CDS YP_004334324.1 331698085 10366151 complement(4641172..4642113) 1 NC_015312.1 KEGG: jan:Jann_2625 alpha/beta hydrolase; PFAM: Alpha/beta hydrolase fold-1; Haloalkane dehalogenase 4642113 10366151 Psed_4309 Pseudonocardia dioxanivorans CB1190 Haloalkane dehalogenase YP_004334324.1 4641172 R 675635 CDS YP_004334325.1 331698086 10366152 complement(4642130..4643245) 1 NC_015312.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: pol:Bpro_5180 mandelate racemase/muconate lactonizing enzyme; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; mandelate racemase 4643245 10366152 Psed_4310 Pseudonocardia dioxanivorans CB1190 mandelate racemase YP_004334325.1 4642130 R 675635 CDS YP_004334326.1 331698087 10366153 complement(4643242..4644174) 1 NC_015312.1 TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: pol:Bpro_0535 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; 2-dehydropantoate 2-reductase 4644174 10366153 Psed_4311 Pseudonocardia dioxanivorans CB1190 2-dehydropantoate 2-reductase YP_004334326.1 4643242 R 675635 CDS YP_004334327.1 331698088 10366154 4644281..4644889 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pol:Bpro_5182 TetR family transcriptional regulator; TetR family transcriptional regulator 4644889 10366154 Psed_4312 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334327.1 4644281 D 675635 CDS YP_004334328.1 331698089 10366156 complement(4645517..4645972) 1 NC_015312.1 hypothetical protein 4645972 10366156 Psed_4314 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334328.1 4645517 R 675635 CDS YP_004334329.1 331698090 10366157 4646468..4649134 1 NC_015312.1 KEGG: cai:Caci_3610 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4649134 10366157 Psed_4315 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334329.1 4646468 D 675635 CDS YP_004334330.1 331698091 10366158 4649235..4649837 1 NC_015312.1 KEGG: cwo:Cwoe_3840 hypothetical protein; hypothetical protein 4649837 10366158 Psed_4316 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334330.1 4649235 D 675635 CDS YP_004334331.1 331698092 10366159 4649834..4651288 1 NC_015312.1 KEGG: nml:Namu_2946 9-cis-epoxycarotenoid dioxygenase; PFAM: Carotenoid oxygenase; 9-cis-epoxycarotenoid dioxygenase 4651288 10366159 Psed_4317 Pseudonocardia dioxanivorans CB1190 9-cis-epoxycarotenoid dioxygenase YP_004334331.1 4649834 D 675635 CDS YP_004334332.1 331698093 10366160 4651316..4651864 1 NC_015312.1 KEGG: mpi:Mpet_0814 hypothetical protein; hypothetical protein 4651864 10366160 Psed_4318 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334332.1 4651316 D 675635 CDS YP_004334333.1 331698094 10366161 complement(4652051..4654867) 1 NC_015312.1 KEGG: sro:Sros_8709 ATPase-like protein; PFAM: Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4654867 10366161 Psed_4319 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334333.1 4652051 R 675635 CDS YP_004334334.1 331698095 10366162 complement(4655004..4655759) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; KEGG: rop:ROP_04760 oxidoreductase; alcohol dehydrogenase 4655759 10366162 Psed_4320 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004334334.1 4655004 R 675635 CDS YP_004334335.1 331698096 10366163 complement(4655756..4656103) 1 NC_015312.1 hypothetical protein 4656103 10366163 Psed_4321 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334335.1 4655756 R 675635 CDS YP_004334336.1 331698097 10366164 complement(4656107..4657489) 1 NC_015312.1 KEGG: amd:AMED_3505 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 4657489 10366164 Psed_4322 Pseudonocardia dioxanivorans CB1190 dihydrolipoyl dehydrogenase YP_004334336.1 4656107 R 675635 CDS YP_004334337.1 331698098 10366166 4658324..4658551 1 NC_015312.1 hypothetical protein 4658551 10366166 Psed_4324 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334337.1 4658324 D 675635 CDS YP_004334338.1 331698099 10366167 4658548..4660251 1 NC_015312.1 KEGG: amd:AMED_3893 phthalate 4,5-dioxygenase; PFAM: Molybdenum cofactor sulfurase, C-terminal; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; nitric oxide dioxygenase 4660251 10366167 Psed_4325 Pseudonocardia dioxanivorans CB1190 nitric oxide dioxygenase YP_004334338.1 4658548 D 675635 CDS YP_004334339.1 331698100 10366168 4660431..4660703 1 NC_015312.1 KEGG: req:REQ_13370 integral membrane protein; hypothetical protein 4660703 10366168 Psed_4326 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334339.1 4660431 D 675635 CDS YP_004334340.1 331698101 10366169 complement(4660754..4661614) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: efe:EFER_2276 hydrolase or acyltransferase; alpha/beta hydrolase 4661614 10366169 Psed_4327 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334340.1 4660754 R 675635 CDS YP_004334341.1 331698102 10366170 complement(4661685..4663253) 1 NC_015312.1 KEGG: cai:Caci_3634 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Metal-dependent phosphohydrolase, HD subdomain; SMART: Transcription regulator LuxR, C-terminal; Metal-dependent phosphohydrolase, HD domain; LuxR family transcriptional regulator 4663253 10366170 Psed_4328 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334341.1 4661685 R 675635 CDS YP_004334342.1 331698103 10366171 4663880..4664884 1 NC_015312.1 KEGG: fal:FRAAL1383 hypothetical protein; hypothetical protein 4664884 10366171 Psed_4329 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334342.1 4663880 D 675635 CDS YP_004334343.1 331698104 10366172 4664881..4665771 1 NC_015312.1 KEGG: fal:FRAAL1382 hypothetical protein; hypothetical protein 4665771 10366172 Psed_4330 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334343.1 4664881 D 675635 CDS YP_004334344.1 331698105 10366173 4665825..4666817 1 NC_015312.1 PFAM: Protein of unknown function DUF955; KEGG: sgr:SGR_7016t hypothetical protein; hypothetical protein 4666817 10366173 Psed_4331 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334344.1 4665825 D 675635 CDS YP_004334345.1 331698106 10366174 4666924..4667220 1 NC_015312.1 KEGG: fra:Francci3_0884 hypothetical protein; hypothetical protein 4667220 10366174 Psed_4332 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334345.1 4666924 D 675635 CDS YP_004334346.1 331698107 10366175 4667195..4668502 1 NC_015312.1 PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: rpx:Rpdx1_2116 UBA/ThiF-type NAD/FAD-binding protein; UBA/THIF-type NAD/FAD binding protein 4668502 10366175 Psed_4333 Pseudonocardia dioxanivorans CB1190 UBA/THIF-type NAD/FAD binding protein YP_004334346.1 4667195 D 675635 CDS YP_004334347.1 331698108 10366176 4668504..4668887 1 NC_015312.1 KEGG: sjp:SJA_C1-20390 hypothetical protein; hypothetical protein 4668887 10366176 Psed_4334 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334347.1 4668504 D 675635 CDS YP_004334348.1 331698109 10366178 4671793..4673139 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 4673139 10366178 Psed_4336 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004334348.1 4671793 D 675635 CDS YP_004334349.1 331698110 10366179 4673281..4674177 1 NC_015312.1 PFAM: Ureohydrolase; KEGG: pdi:BDI_1757 arginase; arginase 4674177 10366179 Psed_4337 Pseudonocardia dioxanivorans CB1190 arginase YP_004334349.1 4673281 D 675635 CDS YP_004334350.1 331698111 10366180 4674603..4674908 1 NC_015312.1 hypothetical protein 4674908 10366180 Psed_4338 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334350.1 4674603 D 675635 CDS YP_004334351.1 331698112 10366181 4674905..4675084 1 NC_015312.1 hypothetical protein 4675084 10366181 Psed_4339 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334351.1 4674905 D 675635 CDS YP_004334352.1 331698113 10366182 complement(4675228..4675575) 1 NC_015312.1 hypothetical protein 4675575 10366182 Psed_4340 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334352.1 4675228 R 675635 CDS YP_004334353.1 331698114 10366183 complement(4675666..4676271) 1 NC_015312.1 hypothetical protein 4676271 10366183 Psed_4341 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334353.1 4675666 R 675635 CDS YP_004334354.1 331698115 10366184 complement(4676748..4677548) 1 NC_015312.1 PFAM: Protein of unknown function DUF81; KEGG: sgr:SGR_5215 hypothetical protein; hypothetical protein 4677548 10366184 Psed_4342 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334354.1 4676748 R 675635 CDS YP_004334355.1 331698116 10366185 4677649..4678071 1 NC_015312.1 KEGG: sen:SACE_0570 molybdate ABC molybdate transporter substrate-binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, MerR; molybdenum-pterin-binding protein 4678071 10366185 Psed_4343 Pseudonocardia dioxanivorans CB1190 molybdenum-pterin-binding protein YP_004334355.1 4677649 D 675635 CDS YP_004334356.1 331698117 10366186 complement(4678084..4679082) 1 NC_015312.1 PFAM: Bile acid:sodium symporter; KEGG: rop:ROP_00110 hypothetical membrane protein; bile acid:sodium symporter 4679082 10366186 Psed_4344 Pseudonocardia dioxanivorans CB1190 bile acid:sodium symporter YP_004334356.1 4678084 R 675635 CDS YP_004334357.1 331698118 10366187 4679468..4679830 1 NC_015312.1 KEGG: nfa:nfa22980 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 4679830 10366187 Psed_4345 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004334357.1 4679468 D 675635 CDS YP_004334358.1 331698119 10366188 4679827..4680309 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: nfa:nfa22970 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 4680309 10366188 Psed_4346 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004334358.1 4679827 D 675635 CDS YP_004334359.1 331698120 10366189 4680306..4680932 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: mpa:MAP0231c hypothetical protein; hypothetical protein 4680932 10366189 Psed_4347 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334359.1 4680306 D 675635 CDS YP_004334360.1 331698121 10366190 complement(4681337..4681594) 1 NC_015312.1 manually curated; hypothetical protein 4681594 10366190 Psed_4348 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334360.1 4681337 R 675635 CDS YP_004334361.1 331698122 10366192 4682384..4683430 1 NC_015312.1 PFAM: Aminoglycoside phosphotransferase; KEGG: mmi:MMAR_1490 hypothetical protein; aminoglycoside phosphotransferase 4683430 10366192 Psed_4350 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004334361.1 4682384 D 675635 CDS YP_004334362.1 331698123 10366193 complement(4683440..4684243) 1 NC_015312.1 PFAM: Nucleoside phosphorylase domain; KEGG: ote:Oter_4454 purine phosphorylase 1; purine or other phosphorylase 1 4684243 10366193 Psed_4351 Pseudonocardia dioxanivorans CB1190 purine or other phosphorylase 1 YP_004334362.1 4683440 R 675635 CDS YP_004334363.1 331698124 10366194 complement(4684252..4685550) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: art:Arth_3829 major facilitator transporter; major facilitator superfamily protein 4685550 10366194 Psed_4352 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334363.1 4684252 R 675635 CDS YP_004334364.1 331698125 10366195 complement(4685547..4686944) 1 NC_015312.1 KEGG: rop:ROP_pROB01-03280 hypothetical protein; PFAM: Beta-lactamase-like; Rhodanese-like; SMART: Beta-lactamase-like; Rhodanese-like; beta-lactamase domain-containing protein 4686944 10366195 Psed_4353 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004334364.1 4685547 R 675635 CDS YP_004334365.1 331698126 10366196 4687018..4687683 1 NC_015312.1 KEGG: rha:RHA1_ro11220 ArsR family transcriptional regulator; PFAM: Rhodanese-like; HTH transcriptional regulator, ArsR; SMART: Rhodanese-like; HTH transcriptional regulator, ArsR; rhodanese-like protein 4687683 10366196 Psed_4354 Pseudonocardia dioxanivorans CB1190 rhodanese-like protein YP_004334365.1 4687018 D 675635 CDS YP_004334366.1 331698127 10366197 complement(4687690..4688352) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: gob:Gobs_1427 type 11 methyltransferase; type 11 methyltransferase 4688352 10366197 Psed_4355 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004334366.1 4687690 R 675635 CDS YP_004334367.1 331698128 10366198 complement(4688431..4689759) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: stp:Strop_2968 major facilitator transporter; major facilitator superfamily protein 4689759 10366198 Psed_4356 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334367.1 4688431 R 675635 CDS YP_004334368.1 331698129 10366199 4690095..4690406 1 NC_015312.1 KEGG: dmo:Dmoj_GI15099 GI15099 gene product from transcript GI15099-RA; hypothetical protein 4690406 10366199 Psed_4357 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334368.1 4690095 D 675635 CDS YP_004334369.1 331698130 10366200 complement(4690574..4690987) 1 NC_015312.1 hypothetical protein 4690987 10366200 Psed_4358 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334369.1 4690574 R 675635 CDS YP_004334370.1 331698131 10366201 complement(4690984..4691181) 1 NC_015312.1 hypothetical protein 4691181 10366201 Psed_4359 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334370.1 4690984 R 675635 CDS YP_004334371.1 331698132 10366202 complement(4691178..4693463) 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tcu:Tcur_0090 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 4693463 10366202 Psed_4360 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004334371.1 4691178 R 675635 CDS YP_004334372.1 331698133 10366203 complement(4693463..4694068) 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: mjl:Mjls_0685 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 4694068 10366203 Psed_4361 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004334372.1 4693463 R 675635 CDS YP_004334373.1 331698134 10366204 complement(4694077..4694700) 1 NC_015312.1 KEGG: rha:RHA1_ro07031 hypothetical protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; vitamin K epoxide reductase 4694700 10366204 Psed_4362 Pseudonocardia dioxanivorans CB1190 vitamin K epoxide reductase YP_004334373.1 4694077 R 675635 CDS YP_004334374.1 331698135 10366205 complement(4694700..4695404) 1 NC_015312.1 PFAM: DSBA-like thioredoxin domain; KEGG: nfa:pnf1420 hypothetical protein; DSBA oxidoreductase 4695404 10366205 Psed_4363 Pseudonocardia dioxanivorans CB1190 DSBA oxidoreductase YP_004334374.1 4694700 R 675635 CDS YP_004334375.1 331698136 10366206 complement(4695401..4695931) 1 NC_015312.1 PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 4695931 10366206 Psed_4364 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004334375.1 4695401 R 675635 CDS YP_004334376.1 331698137 10366207 complement(4696079..4696516) 1 NC_015312.1 hypothetical protein 4696516 10366207 Psed_4365 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334376.1 4696079 R 675635 CDS YP_004334377.1 331698138 10366208 4696718..4697488 1 NC_015312.1 PFAM: Peptidase M23; KEGG: rop:ROP_10830 peptidase M23 family protein; peptidase M23 4697488 10366208 Psed_4366 Pseudonocardia dioxanivorans CB1190 peptidase M23 YP_004334377.1 4696718 D 675635 CDS YP_004334378.1 331698139 10366209 4697573..4697932 1 NC_015312.1 hypothetical protein 4697932 10366209 Psed_4367 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334378.1 4697573 D 675635 CDS YP_004334379.1 331698140 10366210 4698068..4698289 1 NC_015312.1 hypothetical protein 4698289 10366210 Psed_4368 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334379.1 4698068 D 675635 CDS YP_004334380.1 331698141 10366211 4698286..4699260 1 NC_015312.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: cai:Caci_1675 hypothetical protein; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein 4699260 10366211 Psed_4369 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase caa3-type, assembly factor CtaG-like protein YP_004334380.1 4698286 D 675635 CDS YP_004334381.1 331698142 10366212 4699257..4699823 1 NC_015312.1 PFAM: Copper resistance protein CopC, core; KEGG: sro:Sros_6847 conserved hypothetical protein of Cu resistance protein CopC-like protein; copper resistance protein CopC 4699823 10366212 Psed_4370 Pseudonocardia dioxanivorans CB1190 copper resistance protein CopC YP_004334381.1 4699257 D 675635 CDS YP_004334382.1 331698143 10366213 complement(4699801..4700184) 1 NC_015312.1 KEGG: amd:AMED_3101 lysyl tRNA synthetase-like protein; lysyl tRNA synthetase-like protein 4700184 10366213 Psed_4371 Pseudonocardia dioxanivorans CB1190 lysyl tRNA synthetase-like protein YP_004334382.1 4699801 R 675635 CDS YP_004334383.1 331698144 10366214 complement(4700184..4701338) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: rxy:Rxyl_3149 glycosyl transferase protein; type 11 methyltransferase 4701338 10366214 Psed_4372 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004334383.1 4700184 R 675635 CDS YP_004334384.1 331698145 10366215 complement(4701391..4701984) 1 NC_015312.1 hypothetical protein 4701984 10366215 Psed_4373 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334384.1 4701391 R 675635 CDS YP_004334385.1 331698146 10366216 4702217..4702522 1 NC_015312.1 KEGG: dmo:Dmoj_GI15099 GI15099 gene product from transcript GI15099-RA; hypothetical protein 4702522 10366216 Psed_4374 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334385.1 4702217 D 675635 CDS YP_004334386.1 331698147 10366217 complement(4702690..4703979) 1 NC_015312.1 TIGRFAM: Natural resistance-associated macrophage protein; HAMAP: Manganese transport protein MntH; KEGG: mil:ML5_2269 mn2+/fe2+ transporter, nramp family; PFAM: Natural resistance-associated macrophage protein; manganese transport protein mntH 4703979 10366217 Psed_4375 Pseudonocardia dioxanivorans CB1190 manganese transport protein mntH YP_004334386.1 4702690 R 675635 CDS YP_004334387.1 331698148 10366218 complement(4703972..4706182) 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: rop:ROP_pROB01-02560 cadmium-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 4706182 10366218 Psed_4376 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004334387.1 4703972 R 675635 CDS YP_004334388.1 331698149 10366219 complement(4706175..4706555) 1 NC_015312.1 KEGG: nda:Ndas_1791 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 4706555 10366219 Psed_4377 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004334388.1 4706175 R 675635 CDS YP_004334389.1 331698150 10366220 4706677..4707612 1 NC_015312.1 KEGG: mmi:MMAR_2144 hypothetical protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 4707612 10366220 Psed_4378 Pseudonocardia dioxanivorans CB1190 cation diffusion facilitator family transporter YP_004334389.1 4706677 D 675635 CDS YP_004334390.1 331698151 10366221 4707679..4708200 1 NC_015312.1 hypothetical protein 4708200 10366221 Psed_4379 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334390.1 4707679 D 675635 CDS YP_004334391.1 331698152 10366222 complement(4708212..4712585) 1 NC_015312.1 PFAM: TrwC relaxase; KEGG: kfl:Kfla_2190 TrwC relaxase; TrwC relaxase 4712585 10366222 Psed_4380 Pseudonocardia dioxanivorans CB1190 TrwC relaxase YP_004334391.1 4708212 R 675635 CDS YP_004334392.1 331698153 10366223 complement(4712827..4713747) 1 NC_015312.1 KEGG: scb:SCAB_46911 mobile element transfer protein; hypothetical protein 4713747 10366223 Psed_4381 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334392.1 4712827 R 675635 CDS YP_004334393.1 331698154 10366224 complement(4713744..4714142) 1 NC_015312.1 hypothetical protein 4714142 10366224 Psed_4382 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334393.1 4713744 R 675635 CDS YP_004334394.1 331698155 10366225 complement(4714139..4714807) 1 NC_015312.1 KEGG: kfl:Kfla_2188 hypothetical protein; hypothetical protein 4714807 10366225 Psed_4383 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334394.1 4714139 R 675635 CDS YP_004334395.1 331698156 10366226 complement(4714913..4716787) 1 NC_015312.1 KEGG: kfl:Kfla_2184 type IV secretory pathway VirD4 protein-like protein; type IV secretory pathway VirD4 protein-like protein 4716787 10366226 Psed_4384 Pseudonocardia dioxanivorans CB1190 type IV secretory pathway VirD4 protein-like protein YP_004334395.1 4714913 R 675635 CDS YP_004334396.1 331698157 10366227 complement(4716784..4717146) 1 NC_015312.1 hypothetical protein 4717146 10366227 Psed_4385 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334396.1 4716784 R 675635 CDS YP_004334397.1 331698158 10366228 complement(4717143..4717571) 1 NC_015312.1 hypothetical protein 4717571 10366228 Psed_4386 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334397.1 4717143 R 675635 CDS YP_004334398.1 331698159 10366230 complement(4718111..4718347) 1 NC_015312.1 hypothetical protein 4718347 10366230 Psed_4388 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334398.1 4718111 R 675635 CDS YP_004334399.1 331698160 10366231 complement(4718344..4718607) 1 NC_015312.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: kfl:Kfla_2180 DNA binding domain protein, excisionase; excisionase 4718607 10366231 Psed_4389 Pseudonocardia dioxanivorans CB1190 excisionase YP_004334399.1 4718344 R 675635 CDS YP_004334400.1 331698161 10366232 4718829..4719944 1 NC_015312.1 KEGG: sen:SACE_0474 hypothetical protein; hypothetical protein 4719944 10366232 Psed_4390 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334400.1 4718829 D 675635 CDS YP_004334401.1 331698162 10366233 complement(4719930..4720505) 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_1278 NUDIX hydrolase; NUDIX hydrolase 4720505 10366233 Psed_4391 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004334401.1 4719930 R 675635 CDS YP_004334402.1 331698163 10366234 complement(4720543..4720986) 1 NC_015312.1 KEGG: sro:Sros_8675 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4720986 10366234 Psed_4392 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334402.1 4720543 R 675635 CDS YP_004334403.1 331698164 10366235 complement(4721098..4722873) 1 NC_015312.1 KEGG: sna:Snas_6234 regulatory protein GntR HTH; PFAM: Integrase, catalytic core, phage; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; integrase protein 4722873 10366235 Psed_4393 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004334403.1 4721098 R 675635 CDS YP_004334404.1 331698165 10366237 complement(4723053..4723757) 1 NC_015312.1 KEGG: rha:RHA1_ro07102 hypothetical protein; hypothetical protein 4723757 10366237 Psed_4394 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334404.1 4723053 R 675635 CDS YP_004334405.1 331698166 10366238 complement(4723754..4724140) 1 NC_015312.1 KEGG: mil:ML5_4917 hypothetical protein; hypothetical protein 4724140 10366238 Psed_4395 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334405.1 4723754 R 675635 CDS YP_004334406.1 331698167 10366239 complement(4724140..4724580) 1 NC_015312.1 KEGG: amd:AMED_7516 hypothetical protein; hypothetical protein 4724580 10366239 Psed_4396 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334406.1 4724140 R 675635 CDS YP_004334407.1 331698168 10366240 complement(4724601..4725041) 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: sen:SACE_5694 hypothetical protein; polyketide cyclase/dehydrase 4725041 10366240 Psed_4397 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004334407.1 4724601 R 675635 CDS YP_004334408.1 331698169 10366241 complement(4725042..4725914) 1 NC_015312.1 PFAM: TIM-barrel signal transduction protein, predicted; KEGG: sen:SACE_5695 hypothetical protein; TIM-barrel signal transduction protein 4725914 10366241 Psed_4398 Pseudonocardia dioxanivorans CB1190 TIM-barrel signal transduction protein YP_004334408.1 4725042 R 675635 CDS YP_004334409.1 331698170 10366242 complement(4725911..4727098) 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0261; KEGG: sen:SACE_5696 hypothetical protein; hypothetical protein 4727098 10366242 Psed_4399 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334409.1 4725911 R 675635 CDS YP_004334410.1 331698171 10366243 complement(4727138..4727512) 1 NC_015312.1 hypothetical protein 4727512 10366243 Psed_4400 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334410.1 4727138 R 675635 CDS YP_004334411.1 331698172 10366244 complement(4727621..4728979) 1 NC_015312.1 KEGG: rha:RHA1_ro00971 hypothetical protein; manually curated; PFAM: Uncharacterised protein family YphA; DoxX family protein 4728979 10366244 Psed_4401 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004334411.1 4727621 R 675635 CDS YP_004334412.1 331698173 10366245 4729033..4730061 1 NC_015312.1 KEGG: mil:ML5_3758 glucokinase, rok family; PFAM: ROK; glucokinase 4730061 10366245 Psed_4402 Pseudonocardia dioxanivorans CB1190 glucokinase YP_004334412.1 4729033 D 675635 CDS YP_004334413.1 331698174 10366246 4730071..4731849 1 NC_015312.1 KEGG: gbr:Gbro_2527 hypothetical protein; hypothetical protein 4731849 10366246 Psed_4403 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334413.1 4730071 D 675635 CDS YP_004334414.1 331698175 10366247 4731846..4732418 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_5232 aminoglycoside 6'-N-acetyltransferase; GCN5-like N-acetyltransferase 4732418 10366247 Psed_4404 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334414.1 4731846 D 675635 CDS YP_004334415.1 331698176 10366248 complement(4732468..4733181) 1 NC_015312.1 PFAM: Tetracycline transcriptional regulator, TetR, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_6464 transcriptional regulator, TetR family; tetracycline repressor 4733181 10366248 Psed_4405 Pseudonocardia dioxanivorans CB1190 tetracycline repressor YP_004334415.1 4732468 R 675635 CDS YP_004334416.1 331698177 10366249 4733292..4734728 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_6465 transporter; major facilitator superfamily protein 4734728 10366249 Psed_4406 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334416.1 4733292 D 675635 CDS YP_004334417.1 331698178 10366250 complement(4734750..4735535) 1 NC_015312.1 KEGG: fre:Franean1_5043 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Domain of unknown function DUF1503; hypothetical protein 4735535 10366250 Psed_4407 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334417.1 4734750 R 675635 CDS YP_004334418.1 331698179 10366251 4735682..4735960 1 NC_015312.1 hypothetical protein 4735960 10366251 Psed_4408 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334418.1 4735682 D 675635 CDS YP_004334419.1 331698180 10366252 4736072..4739317 1 NC_015312.1 TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; KEGG: amd:AMED_2498 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; ArgK protein; methylmalonyl-CoA mutase large subunit 4739317 10366252 Psed_4409 Pseudonocardia dioxanivorans CB1190 methylmalonyl-CoA mutase large subunit YP_004334419.1 4736072 D 675635 CDS YP_004334420.1 331698181 10366253 complement(4739466..4739957) 1 NC_015312.1 KEGG: gob:Gobs_1789 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4739957 10366253 Psed_4410 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004334420.1 4739466 R 675635 CDS YP_004334421.1 331698182 10366254 4740021..4740647 1 NC_015312.1 KEGG: nml:Namu_1846 NAD(P)H dehydrogenase (quinone); HAMAP: NADH-azoreductase, FMN-dependent; PFAM: Flavodoxin-like fold; FMN-dependent NADH-azoreductase 4740647 10366254 Psed_4411 Pseudonocardia dioxanivorans CB1190 FMN-dependent NADH-azoreductase YP_004334421.1 4740021 D 675635 CDS YP_004334422.1 331698183 10366255 complement(4740577..4741770) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: srt:Srot_0667 major facilitator superfamily protein; major facilitator superfamily protein 4741770 10366255 Psed_4412 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334422.1 4740577 R 675635 CDS YP_004334423.1 331698184 10366256 4741956..4742714 1 NC_015312.1 PFAM: Periplasmic binding protein; KEGG: fra:Francci3_3150 hypothetical protein; ABC transporter substrate-binding protein 4742714 10366256 Psed_4413 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004334423.1 4741956 D 675635 CDS YP_004334424.1 331698185 10366257 4742761..4743801 1 NC_015312.1 KEGG: fri:FraEuI1c_3494 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; 3-hydroxyisobutyryl-CoA hydrolase 4743801 10366257 Psed_4414 Pseudonocardia dioxanivorans CB1190 3-hydroxyisobutyryl-CoA hydrolase YP_004334424.1 4742761 D 675635 CDS YP_004334425.1 331698186 10366258 4743931..4744815 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 4744815 10366258 Psed_4415 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004334425.1 4743931 D 675635 CDS YP_004334426.1 331698187 10366259 complement(4744840..4746033) 1 NC_015312.1 PFAM: Alanine racemase, N-terminal; KEGG: req:REQ_14970 hypothetical protein; alanine racemase 4746033 10366259 Psed_4416 Pseudonocardia dioxanivorans CB1190 alanine racemase YP_004334426.1 4744840 R 675635 CDS YP_004334427.1 331698188 10366260 complement(4746030..4747214) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro06868 major facilitator transporter; major facilitator superfamily protein 4747214 10366260 Psed_4417 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334427.1 4746030 R 675635 CDS YP_004334428.1 331698189 10366261 complement(4747214..4747861) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: req:REQ_14960 TetR family transcriptional regulator; TetR family transcriptional regulator 4747861 10366261 Psed_4418 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334428.1 4747214 R 675635 CDS YP_004334429.1 331698190 10366262 4747927..4749246 1 NC_015312.1 TIGRFAM: FAD-linked oxidoreductase; KEGG: rha:RHA1_ro06029 L-gulonolactone oxidase; PFAM: D-arabinono-1,4-lactone oxidase; FAD linked oxidase, N-terminal; FAD-linked oxidoreductase 4749246 10366262 Psed_4419 Pseudonocardia dioxanivorans CB1190 FAD-linked oxidoreductase YP_004334429.1 4747927 D 675635 CDS YP_004334430.1 331698191 10366263 4749266..4749724 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: gob:Gobs_3663 NUDIX hydrolase; NUDIX hydrolase 4749724 10366263 Psed_4420 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004334430.1 4749266 D 675635 CDS YP_004334431.1 331698192 10366264 4749762..4750622 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rer:RER_53490 lipase; alpha/beta hydrolase 4750622 10366264 Psed_4421 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334431.1 4749762 D 675635 CDS YP_004334432.1 331698193 10366265 complement(4750676..4751272) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL4881 transcriptional regulator; TetR family transcriptional regulator 4751272 10366265 Psed_4422 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334432.1 4750676 R 675635 CDS YP_004334433.1 331698194 10366266 complement(4751269..4752435) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pla:Plav_1773 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 4752435 10366266 Psed_4423 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004334433.1 4751269 R 675635 CDS YP_004334434.1 331698195 10366267 4752687..4753469 1 NC_015312.1 KEGG: ami:Amir_6644 hypothetical protein; hypothetical protein 4753469 10366267 Psed_4424 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334434.1 4752687 D 675635 CDS YP_004334435.1 331698196 10366268 complement(4753611..4754315) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: stp:Strop_0183 methyltransferase type 11; type 11 methyltransferase 4754315 10366268 Psed_4425 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004334435.1 4753611 R 675635 CDS YP_004334436.1 331698197 10366269 4754398..4755327 1 NC_015312.1 KEGG: stp:Strop_0182 helix-turn-helix domain-containing protein; PFAM: Cupin 2, conserved barrel; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 4755327 10366269 Psed_4426 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004334436.1 4754398 D 675635 CDS YP_004334437.1 331698198 10366270 complement(4755430..4756113) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sna:Snas_2833 transcriptional regulator, TetR family; TetR family transcriptional regulator 4756113 10366270 Psed_4427 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334437.1 4755430 R 675635 CDS YP_004334438.1 331698199 10366271 4756223..4757437 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: sna:Snas_2832 cytochrome P450; cytochrome P450 4757437 10366271 Psed_4428 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004334438.1 4756223 D 675635 CDS YP_004334439.1 331698200 10366272 4757705..4758934 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: scb:SCAB_2561 hypothetical protein; major facilitator superfamily protein 4758934 10366272 Psed_4429 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334439.1 4757705 D 675635 CDS YP_004334440.1 331698201 10366273 4759017..4759976 1 NC_015312.1 KEGG: rha:RHA1_ro03286 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 4759976 10366273 Psed_4430 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004334440.1 4759017 D 675635 CDS YP_004334441.1 331698202 10366274 4760088..4761329 1 NC_015312.1 KEGG: kfl:Kfla_1943 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 4761329 10366274 Psed_4431 Pseudonocardia dioxanivorans CB1190 linalool 8-monooxygenase YP_004334441.1 4760088 D 675635 CDS YP_004334442.1 331698203 10366275 4761404..4762447 1 NC_015312.1 KEGG: ace:Acel_0148 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 4762447 10366275 Psed_4432 Pseudonocardia dioxanivorans CB1190 aryl-alcohol dehydrogenase YP_004334442.1 4761404 D 675635 CDS YP_004334443.1 331698204 10366276 4762512..4763423 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: sgr:SGR_1577 monooxygenase; luciferase-like protein 4763423 10366276 Psed_4433 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004334443.1 4762512 D 675635 CDS YP_004334444.1 331698205 10366277 4763492..4764415 1 NC_015312.1 KEGG: tcu:Tcur_2334 luciferase-like monooxygenase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 4764415 10366277 Psed_4434 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004334444.1 4763492 D 675635 CDS YP_004334445.1 331698206 10366278 4764534..4765019 1 NC_015312.1 KEGG: rha:RHA1_ro07107 hypothetical protein; hypothetical protein 4765019 10366278 Psed_4435 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334445.1 4764534 D 675635 CDS YP_004334446.1 331698207 10366279 complement(4765205..4766827) 1 NC_015312.1 KEGG: cyj:Cyan7822_2221 monooxygenase FAD-binding protein; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 4766827 10366279 Psed_4436 Pseudonocardia dioxanivorans CB1190 pentachlorophenol monooxygenase YP_004334446.1 4765205 R 675635 CDS YP_004334447.1 331698208 10366280 complement(4766865..4767998) 1 NC_015312.1 KEGG: reu:Reut_B3601 salicylate 1-monooxygenase; PFAM: Monooxygenase, FAD-binding; Salicylate 1-monooxygenase 4767998 10366280 Psed_4437 Pseudonocardia dioxanivorans CB1190 Salicylate 1-monooxygenase YP_004334447.1 4766865 R 675635 CDS YP_004334448.1 331698209 10366281 complement(4767995..4768831) 1 NC_015312.1 PFAM: Patatin/Phospholipase A2-related; KEGG: tbi:Tbis_1218 patatin; patatin 4768831 10366281 Psed_4438 Pseudonocardia dioxanivorans CB1190 patatin YP_004334448.1 4767995 R 675635 CDS YP_004334449.1 331698210 10366282 complement(4768828..4769979) 1 NC_015312.1 KEGG: pap:PSPA7_3908 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase 4769979 10366282 Psed_4439 Pseudonocardia dioxanivorans CB1190 maleylacetate reductase YP_004334449.1 4768828 R 675635 CDS YP_004334450.1 331698211 10366283 complement(4769976..4770971) 1 NC_015312.1 KEGG: rha:RHA1_ro02996 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase 4770971 10366283 Psed_4440 Pseudonocardia dioxanivorans CB1190 maleylacetate reductase YP_004334450.1 4769976 R 675635 CDS YP_004334451.1 331698212 10366284 complement(4771052..4771630) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dvl:Dvul_0299 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4771630 10366284 Psed_4441 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004334451.1 4771052 R 675635 CDS YP_004334452.1 331698213 10366285 4771854..4772534 1 NC_015312.1 KEGG: cwo:Cwoe_4525 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4772534 10366285 Psed_4442 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004334452.1 4771854 D 675635 CDS YP_004334453.1 331698214 10366286 4773151..4774197 1 NC_015312.1 KEGG: kfl:Kfla_4001 hypothetical protein; hypothetical protein 4774197 10366286 Psed_4443 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334453.1 4773151 D 675635 CDS YP_004334454.1 331698215 10366287 complement(4774294..4775085) 1 NC_015312.1 KEGG: amd:AMED_7632 alpha/beta hydrolase; alpha/beta hydrolase 4775085 10366287 Psed_4444 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334454.1 4774294 R 675635 CDS YP_004334455.1 331698216 10366288 complement(4775159..4775767) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_7633 TetR family transcriptional regulator; TetR family transcriptional regulator 4775767 10366288 Psed_4445 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334455.1 4775159 R 675635 CDS YP_004334456.1 331698217 10366290 4776153..4776362 1 NC_015312.1 KEGG: svi:Svir_13830 hypothetical protein; hypothetical protein 4776362 10366290 Psed_4446 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334456.1 4776153 D 675635 CDS YP_004334457.1 331698218 10366291 complement(4776423..4777181) 1 NC_015312.1 KEGG: svi:Svir_13820 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 12; trans-aconitate 2-methyltransferase 4777181 10366291 Psed_4447 Pseudonocardia dioxanivorans CB1190 trans-aconitate 2-methyltransferase YP_004334457.1 4776423 R 675635 CDS YP_004334458.1 331698219 10366292 complement(4777178..4777702) 1 NC_015312.1 KEGG: amd:AMED_6586 hypothetical protein; hypothetical protein 4777702 10366292 Psed_4448 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334458.1 4777178 R 675635 CDS YP_004334459.1 331698220 10366293 complement(4777702..4779606) 1 NC_015312.1 KEGG: svi:Svir_13800 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase 4779606 10366293 Psed_4449 Pseudonocardia dioxanivorans CB1190 DNA primase YP_004334459.1 4777702 R 675635 CDS YP_004334460.1 331698221 10366294 complement(4779644..4780024) 1 NC_015312.1 KEGG: art:Arth_0254 hypothetical protein; hypothetical protein 4780024 10366294 Psed_4450 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334460.1 4779644 R 675635 CDS YP_004334461.1 331698222 10366295 complement(4780021..4780149) 1 NC_015312.1 hypothetical protein 4780149 10366295 Psed_4451 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334461.1 4780021 R 675635 CDS YP_004334462.1 331698223 10366296 complement(4780239..4780454) 1 NC_015312.1 hypothetical protein 4780454 10366296 Psed_4452 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334462.1 4780239 R 675635 CDS YP_004334463.1 331698224 10366297 complement(4780525..4781283) 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_1769 hypothetical protein; NAD-dependent epimerase/dehydratase 4781283 10366297 Psed_4453 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004334463.1 4780525 R 675635 CDS YP_004334464.1 331698225 10366298 4781386..4782249 1 NC_015312.1 KEGG: ami:Amir_1274 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4782249 10366298 Psed_4454 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004334464.1 4781386 D 675635 CDS YP_004334465.1 331698226 10366300 complement(4783217..4783780) 1 NC_015312.1 KEGG: rop:ROP_50070 hypothetical protein; hypothetical protein 4783780 10366300 Psed_4456 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334465.1 4783217 R 675635 CDS YP_004334466.1 331698227 10366301 complement(4783857..4785155) 1 NC_015312.1 SMART: Metal-dependent phosphohydrolase, HD domain; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; Uncharacterised protein family HDIG; KEGG: ami:Amir_1271 deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase, type 2; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Deoxyguanosinetriphosphate triphosphohydrolase-like protein 4785155 10366301 Psed_4457 Pseudonocardia dioxanivorans CB1190 Deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_004334466.1 4783857 R 675635 CDS YP_004334467.1 331698228 10366302 complement(4785152..4785769) 1 NC_015312.1 PFAM: Domain of unknown function DUF218; KEGG: amd:AMED_6599 hypothetical protein; hypothetical protein 4785769 10366302 Psed_4458 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334467.1 4785152 R 675635 CDS YP_004334468.1 331698229 10366303 complement(4785991..4786947) 1 NC_015312.1 KEGG: cwo:Cwoe_4124 protein of unknown function DUF182; hypothetical protein 4786947 10366303 Psed_4459 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334468.1 4785991 R 675635 CDS YP_004334469.1 331698230 10366304 complement(4787105..4787497) 1 NC_015312.1 hypothetical protein 4787497 10366304 Psed_4460 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334469.1 4787105 R 675635 CDS YP_004334470.1 331698231 10366305 4787590..4787940 1 NC_015312.1 KEGG: scb:SCAB_11071 hypothetical protein; hypothetical protein 4787940 10366305 Psed_4461 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334470.1 4787590 D 675635 CDS YP_004334471.1 331698232 10366306 complement(4787967..4788581) 1 NC_015312.1 KEGG: ami:Amir_1937 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4788581 10366306 Psed_4462 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334471.1 4787967 R 675635 CDS YP_004334472.1 331698233 10366307 complement(4788578..4789840) 1 NC_015312.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: amd:AMED_6601 two-component system histidine kinase; histidine kinase 4789840 10366307 Psed_4463 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004334472.1 4788578 R 675635 CDS YP_004334473.1 331698234 10366308 complement(4789851..4790576) 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: nml:Namu_3004 ABC-2 type transporter; ABC transporter 4790576 10366308 Psed_4464 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004334473.1 4789851 R 675635 CDS YP_004334474.1 331698235 10366309 complement(4790580..4791500) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: amd:AMED_6603 ABC transport system ATP-binding protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 4791500 10366309 Psed_4465 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004334474.1 4790580 R 675635 CDS YP_004334475.1 331698236 10366310 4791736..4793118 1 NC_015312.1 KEGG: nda:Ndas_1941 protein of unknown function DUF21; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; hypothetical protein 4793118 10366310 Psed_4466 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334475.1 4791736 D 675635 CDS YP_004334476.1 331698237 10366311 4793115..4794113 1 NC_015312.1 PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; KEGG: nda:Ndas_1940 protein of unknown function DUF21; hypothetical protein 4794113 10366311 Psed_4467 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334476.1 4793115 D 675635 CDS YP_004334477.1 331698238 10366312 complement(4794150..4795547) 1 NC_015312.1 KEGG: ami:Amir_1266 glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; glycyl-tRNA synthetase 4795547 10366312 Psed_4468 Pseudonocardia dioxanivorans CB1190 glycyl-tRNA synthetase YP_004334477.1 4794150 R 675635 CDS YP_004334478.1 331698239 10366314 4796896..4797228 1 NC_015312.1 KEGG: sro:Sros_7536 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 4797228 10366314 Psed_4470 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004334478.1 4796896 D 675635 CDS YP_004334479.1 331698240 10366315 4797225..4797881 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: cwo:Cwoe_1479 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 4797881 10366315 Psed_4471 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004334479.1 4797225 D 675635 CDS YP_004334480.1 331698241 10366316 complement(4797901..4798263) 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ami:Amir_1263 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4798263 10366316 Psed_4472 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004334480.1 4797901 R 675635 CDS YP_004334481.1 331698242 10366317 4798297..4798668 1 NC_015312.1 KEGG: rer:RER_37090 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 4798668 10366317 Psed_4473 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004334481.1 4798297 D 675635 CDS YP_004334482.1 331698243 10366318 4798665..4799087 1 NC_015312.1 PFAM: Ferric-uptake regulator; KEGG: scb:SCAB_61951 metal uptake regulator; Fur family ferric uptake regulator 4799087 10366318 Psed_4474 Pseudonocardia dioxanivorans CB1190 Fur family ferric uptake regulator YP_004334482.1 4798665 D 675635 CDS YP_004334483.1 331698244 10366319 4799122..4799907 1 NC_015312.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: nfa:nfa14530 undecaprenyl pyrophosphate synthetase; UDP pyrophosphate synthase 4799907 10366319 Psed_4475 Pseudonocardia dioxanivorans CB1190 UDP pyrophosphate synthase YP_004334483.1 4799122 D 675635 CDS YP_004334484.1 331698245 10366320 4799904..4800299 1 NC_015312.1 KEGG: ami:Amir_1257 hypothetical protein; hypothetical protein 4800299 10366320 Psed_4476 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334484.1 4799904 D 675635 CDS YP_004334485.1 331698246 10366321 complement(4800381..4800833) 1 NC_015312.1 KEGG: fri:FraEuI1c_3510 transcription activator effector binding protein; transcription activator effector binding protein 4800833 10366321 Psed_4477 Pseudonocardia dioxanivorans CB1190 transcription activator effector binding protein YP_004334485.1 4800381 R 675635 CDS YP_004334486.1 331698247 10366322 complement(4800942..4801550) 1 NC_015312.1 hypothetical protein 4801550 10366322 Psed_4478 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334486.1 4800942 R 675635 CDS YP_004334487.1 331698248 10366323 complement(4801668..4802408) 1 NC_015312.1 TIGRFAM: Recombination protein O, RecO; HAMAP: Recombination protein O, RecO; KEGG: ami:Amir_1255 DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA repair protein recO 4802408 10366323 Psed_4479 Pseudonocardia dioxanivorans CB1190 DNA repair protein recO YP_004334487.1 4801668 R 675635 CDS YP_004334488.1 331698249 10366324 4802478..4803242 1 NC_015312.1 PFAM: Protein of unknown function DUF2470; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: scl:sce4194 hypothetical protein; hypothetical protein 4803242 10366324 Psed_4480 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334488.1 4802478 D 675635 CDS YP_004334489.1 331698250 10366325 4803274..4803927 1 NC_015312.1 KEGG: gob:Gobs_1138 hypothetical protein; hypothetical protein 4803927 10366325 Psed_4481 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334489.1 4803274 D 675635 CDS YP_004334490.1 331698251 10366326 complement(4803968..4804897) 1 NC_015312.1 TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: sen:SACE_1487 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era 4804897 10366326 Psed_4482 Pseudonocardia dioxanivorans CB1190 GTP-binding protein Era YP_004334490.1 4803968 R 675635 CDS YP_004334491.1 331698252 10366327 complement(4804894..4806153) 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: sgr:SGR_3901 hydroxyglutarate oxidase; FAD dependent oxidoreductase 4806153 10366327 Psed_4483 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004334491.1 4804894 R 675635 CDS YP_004334492.1 331698253 10366328 complement(4806150..4806518) 1 NC_015312.1 KEGG: ami:Amir_1252 cytidine deaminase; cytidine deaminase 4806518 10366328 Psed_4484 Pseudonocardia dioxanivorans CB1190 cytidine deaminase YP_004334492.1 4806150 R 675635 CDS YP_004334493.1 331698254 10366329 complement(4806499..4808046) 1 NC_015312.1 KEGG: sen:SACE_1485 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Domain of unknown function DUF21; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein 4808046 10366329 Psed_4485 Pseudonocardia dioxanivorans CB1190 CBS domain-containing protein YP_004334493.1 4806499 R 675635 CDS YP_004334494.1 331698255 10366330 complement(4808051..4808587) 1 NC_015312.1 TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; KEGG: amd:AMED_6624 metalloprotease; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; metalloprotease ybeY 4808587 10366330 Psed_4486 Pseudonocardia dioxanivorans CB1190 metalloprotease ybeY YP_004334494.1 4808051 R 675635 CDS YP_004334495.1 331698256 10366331 complement(4808701..4809810) 1 NC_015312.1 KEGG: amd:AMED_6625 phosphate starvation-inducible protein PhoH; manually curated; PFAM: PhoH-like protein; PhoH family protein 4809810 10366331 Psed_4487 Pseudonocardia dioxanivorans CB1190 PhoH family protein YP_004334495.1 4808701 R 675635 CDS YP_004334496.1 331698257 10366332 complement(4809938..4810471) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: bav:BAV2792 isochorismatase hydrolase; isochorismatase hydrolase 4810471 10366332 Psed_4488 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004334496.1 4809938 R 675635 CDS YP_004334497.1 331698258 10366333 complement(4810585..4812249) 1 NC_015312.1 KEGG: req:REQ_09650 thiamine pyrophosphate req_0uiring enzyme; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; acetolactate synthase 4812249 10366333 Psed_4489 Pseudonocardia dioxanivorans CB1190 acetolactate synthase YP_004334497.1 4810585 R 675635 CDS YP_004334498.1 331698259 10366334 complement(4812246..4813019) 1 NC_015312.1 PFAM: cyclase; KEGG: sro:Sros_3051 hypothetical protein; cyclase 4813019 10366334 Psed_4490 Pseudonocardia dioxanivorans CB1190 cyclase YP_004334498.1 4812246 R 675635 CDS YP_004334499.1 331698260 10366335 complement(4813148..4813942) 1 NC_015312.1 KEGG: fri:FraEuI1c_1236 hypothetical protein; hypothetical protein 4813942 10366335 Psed_4491 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334499.1 4813148 R 675635 CDS YP_004334500.1 331698261 10366336 complement(4814185..4814931) 1 NC_015312.1 KEGG: ami:Amir_1243 protein of unknown function DUF558; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; ribosomal RNA small subunit methyltransferase E 4814931 10366336 Psed_4492 Pseudonocardia dioxanivorans CB1190 ribosomal RNA small subunit methyltransferase E YP_004334500.1 4814185 R 675635 CDS YP_004334501.1 331698262 10366337 complement(4814954..4816120) 1 NC_015312.1 HAMAP: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich domain; KEGG: ami:Amir_1242 chaperone DnaJ domain protein; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 4816120 10366337 Psed_4493 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaJ YP_004334501.1 4814954 R 675635 CDS YP_004334502.1 331698263 10366338 complement(4816208..4817251) 1 NC_015312.1 TIGRFAM: Winged helix-turn-helix transcription repressor, HrcA; HAMAP: Winged helix-turn-helix transcription repressor, HrcA; KEGG: amd:AMED_6629 heat-inducible transcriptional repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA, C-terminal; heat-inducible transcription repressor HrcA 4817251 10366338 Psed_4494 Pseudonocardia dioxanivorans CB1190 heat-inducible transcription repressor HrcA YP_004334502.1 4816208 R 675635 CDS YP_004334503.1 331698264 10366339 4817361..4817786 1 NC_015312.1 KEGG: sen:SACE_3690 hypothetical protein; hypothetical protein 4817786 10366339 Psed_4495 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334503.1 4817361 D 675635 CDS YP_004334504.1 331698265 10366340 4817857..4818984 1 NC_015312.1 KEGG: amd:AMED_1355 hypothetical protein; hypothetical protein 4818984 10366340 Psed_4496 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334504.1 4817857 D 675635 CDS YP_004334505.1 331698266 10366341 4818981..4819928 1 NC_015312.1 KEGG: amd:AMED_1356 ATPase component of ABC-type multidrug transport system; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 4819928 10366341 Psed_4497 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004334505.1 4818981 D 675635 CDS YP_004334506.1 331698267 10366342 4819925..4820755 1 NC_015312.1 KEGG: amd:AMED_1357 hypothetical protein; hypothetical protein 4820755 10366342 Psed_4498 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334506.1 4819925 D 675635 CDS YP_004334507.1 331698268 10366343 complement(4820773..4821570) 1 NC_015312.1 KEGG: amd:AMED_1358 lipase class 2; lipase class 2 4821570 10366343 Psed_4499 Pseudonocardia dioxanivorans CB1190 lipase class 2 YP_004334507.1 4820773 R 675635 CDS YP_004334508.1 331698269 10366344 complement(4821599..4822819) 1 NC_015312.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: amd:AMED_6654 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 4822819 10366344 Psed_4500 Pseudonocardia dioxanivorans CB1190 oxygen-independent coproporphyrinogen III oxidase YP_004334508.1 4821599 R 675635 CDS YP_004334509.1 331698270 10366345 complement(4822779..4825142) 1 NC_015312.1 PFAM: Secretion protein HlyD; KEGG: fal:FRAAL6470 hypothetical protein; secretion protein HlyD family protein 4825142 10366345 Psed_4501 Pseudonocardia dioxanivorans CB1190 secretion protein HlyD family protein YP_004334509.1 4822779 R 675635 CDS YP_004334510.1 331698271 10366346 complement(4825142..4826374) 1 NC_015312.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: fal:FRAAL6467 ABC transporter permease; hypothetical protein 4826374 10366346 Psed_4502 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334510.1 4825142 R 675635 CDS YP_004334511.1 331698272 10366347 complement(4826371..4827099) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL6466 ABC-type transport systems, involved in lipoprotein release, ATPase components; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 4827099 10366347 Psed_4503 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004334511.1 4826371 R 675635 CDS YP_004334512.1 331698273 10366348 complement(4827096..4828550) 1 NC_015312.1 TIGRFAM: Secretion protein HlyD; KEGG: fal:FRAAL6465 hypothetical protein; RND family efflux transporter MFP subunit 4828550 10366348 Psed_4504 Pseudonocardia dioxanivorans CB1190 RND family efflux transporter MFP subunit YP_004334512.1 4827096 R 675635 CDS YP_004334513.1 331698274 10366349 4829095..4830774 1 NC_015312.1 KEGG: amd:AMED_6656 ferredoxin-nitrite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; sulfite reductase (ferredoxin) 4830774 10366349 Psed_4505 Pseudonocardia dioxanivorans CB1190 sulfite reductase (ferredoxin) YP_004334513.1 4829095 D 675635 CDS YP_004334514.1 331698275 10366350 4830839..4831015 1 NC_015312.1 KEGG: amd:AMED_6657 hypothetical protein; hypothetical protein 4831015 10366350 Psed_4506 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334514.1 4830839 D 675635 CDS YP_004334515.1 331698276 10366351 4831012..4831716 1 NC_015312.1 TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; KEGG: sen:SACE_1475 phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulphate reductase; adenylylsulfate reductase 4831716 10366351 Psed_4507 Pseudonocardia dioxanivorans CB1190 adenylylsulfate reductase YP_004334515.1 4831012 D 675635 CDS YP_004334516.1 331698277 10366352 4831725..4832627 1 NC_015312.1 TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: sen:SACE_1474 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; sulfate adenylyltransferase small subunit 4832627 10366352 Psed_4508 Pseudonocardia dioxanivorans CB1190 sulfate adenylyltransferase small subunit YP_004334516.1 4831725 D 675635 CDS YP_004334517.1 331698278 10366353 4832627..4833976 1 NC_015312.1 TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: ami:Amir_1235 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; sulfate adenylyltransferase large subunit 4833976 10366353 Psed_4509 Pseudonocardia dioxanivorans CB1190 sulfate adenylyltransferase large subunit YP_004334517.1 4832627 D 675635 CDS YP_004334518.1 331698279 10366354 4834016..4835113 1 NC_015312.1 TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; KEGG: ami:Amir_1234 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; aliphatic sulfonate ABC transporter substrate-binding protein 4835113 10366354 Psed_4510 Pseudonocardia dioxanivorans CB1190 aliphatic sulfonate ABC transporter substrate-binding protein YP_004334518.1 4834016 D 675635 CDS YP_004334519.1 331698280 10366355 4835176..4835976 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: ami:Amir_1233 ABC transporter related; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 4835976 10366355 Psed_4511 Pseudonocardia dioxanivorans CB1190 taurine-transporting AtPase YP_004334519.1 4835176 D 675635 CDS YP_004334520.1 331698281 10366356 4835966..4836868 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_1543 permease component of ABC-type sulfonate/nitrate/taurine transport system; ABC transporter permease 4836868 10366356 Psed_4512 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334520.1 4835966 D 675635 CDS YP_004334521.1 331698282 10366357 4836861..4837613 1 NC_015312.1 KEGG: sen:SACE_1472 cobalamin (vitamin B12) biosynthesis CbiX protein; manually curated; PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; cobalamin (vitamin B12) biosynthesis CbiX protein 4837613 10366357 Psed_4513 Pseudonocardia dioxanivorans CB1190 cobalamin (vitamin B12) biosynthesis CbiX protein YP_004334521.1 4836861 D 675635 CDS YP_004334522.1 331698283 10366358 4838124..4838309 1 NC_015312.1 hypothetical protein 4838309 10366358 Psed_4514 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334522.1 4838124 D 675635 CDS YP_004334523.1 331698284 10366359 4838425..4843215 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: sen:SACE_0056 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4843215 10366359 Psed_4515 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004334523.1 4838425 D 675635 CDS YP_004334524.1 331698285 10366360 complement(4843292..4845244) 1 NC_015312.1 KEGG: ami:Amir_6222 hypothetical protein; hypothetical protein 4845244 10366360 Psed_4516 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334524.1 4843292 R 675635 CDS YP_004334525.1 331698286 10366361 4845637..4846734 1 NC_015312.1 KEGG: sma:SAV_6696 monooxygenase; PFAM: Luciferase-like, subgroup; alkanesulfonate monooxygenase 4846734 10366361 Psed_4517 Pseudonocardia dioxanivorans CB1190 alkanesulfonate monooxygenase YP_004334525.1 4845637 D 675635 CDS YP_004334526.1 331698287 10366362 4846983..4847396 1 NC_015312.1 KEGG: nml:Namu_1206 hypothetical protein; hypothetical protein 4847396 10366362 Psed_4518 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334526.1 4846983 D 675635 CDS YP_004334527.1 331698288 10366364 complement(4848054..4848476) 1 NC_015312.1 KEGG: amd:AMED_8411 aromatic compounds degradation protein PaaI; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein 4848476 10366364 Psed_4520 Pseudonocardia dioxanivorans CB1190 phenylacetic acid degradation-like protein YP_004334527.1 4848054 R 675635 CDS YP_004334528.1 331698289 10366365 4848556..4849353 1 NC_015312.1 PFAM: Crotonase, core; KEGG: svi:Svir_12770 enoyl-CoA hydratase; enoyl-CoA hydratase 4849353 10366365 Psed_4521 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004334528.1 4848556 D 675635 CDS YP_004334529.1 331698290 10366366 complement(4849362..4849955) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: tcu:Tcur_2648 hypothetical protein; hypothetical protein 4849955 10366366 Psed_4522 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334529.1 4849362 R 675635 CDS YP_004334530.1 331698291 10366367 4850034..4850882 1 NC_015312.1 KEGG: nca:Noca_0781 silent information regulator protein Sir2; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; NAD-dependent deacetylase 4850882 10366367 Psed_4523 Pseudonocardia dioxanivorans CB1190 NAD-dependent deacetylase YP_004334530.1 4850034 D 675635 CDS YP_004334531.1 331698292 10366368 complement(4850901..4851263) 1 NC_015312.1 PFAM: Barstar (barnase inhibitor); KEGG: svi:Svir_12760 barstar (barnase inhibitor); barnase inhibitor protein 4851263 10366368 Psed_4524 Pseudonocardia dioxanivorans CB1190 barnase inhibitor protein YP_004334531.1 4850901 R 675635 CDS YP_004334532.1 331698293 10366369 complement(4851381..4851827) 1 NC_015312.1 PFAM: Guanine-specific ribonuclease N1/T1; KEGG: sen:SACE_1461 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 4851827 10366369 Psed_4525 Pseudonocardia dioxanivorans CB1190 guanine-specific ribonuclease N1 and T1 YP_004334532.1 4851381 R 675635 CDS YP_004334533.1 331698294 10366370 complement(4851856..4852113) 1 NC_015312.1 KEGG: amd:AMED_6669 hypothetical protein; hypothetical protein 4852113 10366370 Psed_4526 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334533.1 4851856 R 675635 CDS YP_004334534.1 331698295 10366371 4852166..4853131 1 NC_015312.1 KEGG: svi:Svir_12740 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase 4853131 10366371 Psed_4527 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004334534.1 4852166 D 675635 CDS YP_004334535.1 331698296 10366373 complement(4853723..4855579) 1 NC_015312.1 SMART: Translation elongation factor EFG/EF2, C-terminal; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; KEGG: mva:Mvan_3881 GTP-binding protein LepA; HAMAP: GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein LepA 4855579 10366373 Psed_4529 Pseudonocardia dioxanivorans CB1190 GTP-binding protein LepA YP_004334535.1 4853723 R 675635 CDS YP_004334536.1 331698297 10366374 4855731..4856942 1 NC_015312.1 KEGG: gob:Gobs_4815 hypothetical protein; hypothetical protein 4856942 10366374 Psed_4530 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334536.1 4855731 D 675635 CDS YP_004334537.1 331698298 10366375 complement(4857129..4857716) 1 NC_015312.1 KEGG: sro:Sros_3208 hypothetical protein; hypothetical protein 4857716 10366375 Psed_4531 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334537.1 4857129 R 675635 CDS YP_004334538.1 331698299 10366376 4857822..4858742 1 NC_015312.1 KEGG: sen:SACE_2650 integral membrane protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 4858742 10366376 Psed_4532 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334538.1 4857822 D 675635 CDS YP_004334539.1 331698300 10366377 4858753..4858962 1 NC_015312.1 KEGG: sen:SACE_2651 hypothetical protein; hypothetical protein 4858962 10366377 Psed_4533 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334539.1 4858753 D 675635 CDS YP_004334540.1 331698301 10366378 complement(4859142..4860845) 1 NC_015312.1 PFAM: NLP/P60; KEGG: fra:Francci3_1696 NLP/P60; NLP/P60 protein 4860845 10366378 Psed_4534 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004334540.1 4859142 R 675635 CDS YP_004334541.1 331698302 10366379 complement(4860962..4861618) 1 NC_015312.1 KEGG: mil:ML5_2851 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 4861618 10366379 Psed_4535 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334541.1 4860962 R 675635 CDS YP_004334542.1 331698303 10366380 complement(4861622..4863040) 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; KEGG: sro:Sros_6198 signal transduction histidine kinase-like protein; histidine kinase 4863040 10366380 Psed_4536 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004334542.1 4861622 R 675635 CDS YP_004334543.1 331698304 10366381 4863404..4864426 1 NC_015312.1 KEGG: nml:Namu_0595 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase-like protein; 3-methyl-adenine DNA glycosylase 4864426 10366381 Psed_4537 Pseudonocardia dioxanivorans CB1190 3-methyl-adenine DNA glycosylase YP_004334543.1 4863404 D 675635 CDS YP_004334544.1 331698305 10366382 4864588..4865211 1 NC_015312.1 KEGG: mlu:Mlut_22490 hypothetical protein; hypothetical protein 4865211 10366382 Psed_4538 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334544.1 4864588 D 675635 CDS YP_004334545.1 331698306 10366383 complement(4865258..4866061) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: amd:AMED_3863 enoyl-CoA hydratase; enoyl-CoA hydratase 4866061 10366383 Psed_4539 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004334545.1 4865258 R 675635 CDS YP_004334546.1 331698307 10366384 4866092..4866751 1 NC_015312.1 PFAM: O-methyltransferase, family 3; KEGG: fri:FraEuI1c_4952 O-methyltransferase 3; O-methyltransferase protein 4866751 10366384 Psed_4540 Pseudonocardia dioxanivorans CB1190 O-methyltransferase protein YP_004334546.1 4866092 D 675635 CDS YP_004334547.1 331698308 10366385 complement(4866888..4867697) 1 NC_015312.1 manually curated; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; KEGG: amd:AMED_0827 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 4867697 10366385 Psed_4541 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004334547.1 4866888 R 675635 CDS YP_004334548.1 331698309 10366386 4867747..4868187 1 NC_015312.1 PFAM: Protein of unknown function DUF2000; KEGG: fal:FRAAL2351 hypothetical protein; hypothetical protein 4868187 10366386 Psed_4542 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334548.1 4867747 D 675635 CDS YP_004334549.1 331698310 10366387 4868235..4869392 1 NC_015312.1 KEGG: fri:FraEuI1c_1834 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 4869392 10366387 Psed_4543 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004334549.1 4868235 D 675635 CDS YP_004334550.1 331698311 10366389 complement(4870413..4870811) 1 NC_015312.1 KEGG: ami:Amir_1368 cytochrome-c oxidase; cytochrome-c oxidase 4870811 10366389 Psed_4545 Pseudonocardia dioxanivorans CB1190 cytochrome-c oxidase YP_004334550.1 4870413 R 675635 CDS YP_004334551.1 331698312 10366390 complement(4870830..4871777) 1 NC_015312.1 KEGG: svi:Svir_10630 heme/copper-type cytochrome/quinol oxidases, subunit 2; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; cytochrome c oxidase subunit II 4871777 10366390 Psed_4546 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase subunit II YP_004334551.1 4870830 R 675635 CDS YP_004334552.1 331698313 10366391 4871965..4873878 1 NC_015312.1 TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: svi:Svir_10620 asparagine synthase (glutamine-hydrolysing); PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase 4873878 10366391 Psed_4547 Pseudonocardia dioxanivorans CB1190 asparagine synthase YP_004334552.1 4871965 D 675635 CDS YP_004334553.1 331698314 10366392 4873969..4874991 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: stp:Strop_0264 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4874991 10366392 Psed_4548 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334553.1 4873969 D 675635 CDS YP_004334554.1 331698315 10366393 4875160..4876185 1 NC_015312.1 KEGG: ami:Amir_0660 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 4876185 10366393 Psed_4549 Pseudonocardia dioxanivorans CB1190 stearoyl-CoA 9-desaturase YP_004334554.1 4875160 D 675635 CDS YP_004334555.1 331698316 10366394 complement(4876101..4876967) 1 NC_015312.1 TIGRFAM: Diacylglycerol/lipid kinase; PFAM: Diacylglycerol kinase, catalytic domain; KEGG: tcu:Tcur_1799 diacylglycerol kinase catalytic subunit; SMART: Diacylglycerol kinase, catalytic domain; hypothetical protein 4876967 10366394 Psed_4550 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334555.1 4876101 R 675635 CDS YP_004334556.1 331698317 10366395 complement(4876964..4878532) 1 NC_015312.1 KEGG: tcu:Tcur_1798 alkylglycerone-phosphate synthase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; alkylglycerone-phosphate synthase 4878532 10366395 Psed_4551 Pseudonocardia dioxanivorans CB1190 alkylglycerone-phosphate synthase YP_004334556.1 4876964 R 675635 CDS YP_004334557.1 331698318 10366396 4878597..4879157 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: stp:Strop_2581 regulatory protein, TetR; TetR family transcriptional regulator 4879157 10366396 Psed_4552 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334557.1 4878597 D 675635 CDS YP_004334558.1 331698319 10366397 4879154..4880671 1 NC_015312.1 KEGG: saq:Sare_2773 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 4880671 10366397 Psed_4553 Pseudonocardia dioxanivorans CB1190 glycerol-3-phosphate dehydrogenase YP_004334558.1 4879154 D 675635 CDS YP_004334559.1 331698320 10366398 complement(4880797..4881774) 1 NC_015312.1 KEGG: amd:AMED_2190 adenosine kinase; PFAM: Carbohydrate/purine kinase; adenosine kinase 4881774 10366398 Psed_4554 Pseudonocardia dioxanivorans CB1190 adenosine kinase YP_004334559.1 4880797 R 675635 CDS YP_004334560.1 331698321 10366399 complement(4881890..4882264) 1 NC_015312.1 KEGG: svi:Svir_10610 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein 4882264 10366399 Psed_4555 Pseudonocardia dioxanivorans CB1190 iron-sulfur cluster assembly accessory protein YP_004334560.1 4881890 R 675635 CDS YP_004334561.1 331698322 10366400 complement(4882407..4883540) 1 NC_015312.1 TIGRFAM: Glycerate kinase; KEGG: mil:ML5_3725 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase 4883540 10366400 Psed_4556 Pseudonocardia dioxanivorans CB1190 glycerate kinase YP_004334561.1 4882407 R 675635 CDS YP_004334562.1 331698323 10366401 4883574..4884230 1 NC_015312.1 KEGG: ami:Amir_1363 hypothetical protein; hypothetical protein 4884230 10366401 Psed_4557 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334562.1 4883574 D 675635 CDS YP_004334563.1 331698324 10366402 4884233..4884754 1 NC_015312.1 KEGG: sen:SACE_1651 cobinamide kinase / conamide phosphate guanylyltransferase; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase; adenosylcobinamide-phosphate guanylyltransferase 4884754 10366402 Psed_4558 Pseudonocardia dioxanivorans CB1190 adenosylcobinamide-phosphate guanylyltransferase YP_004334563.1 4884233 D 675635 CDS YP_004334564.1 331698325 10366403 4884775..4885830 1 NC_015312.1 KEGG: amd:AMED_2180 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4885830 10366403 Psed_4559 Pseudonocardia dioxanivorans CB1190 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_004334564.1 4884775 D 675635 CDS YP_004334565.1 331698326 10366404 4885827..4886597 1 NC_015312.1 KEGG: sen:SACE_1649 cobalamin 5'-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; cobalamin synthase 4886597 10366404 Psed_4560 Pseudonocardia dioxanivorans CB1190 cobalamin synthase YP_004334565.1 4885827 D 675635 CDS YP_004334566.1 331698327 10366405 complement(4886620..4887726) 1 NC_015312.1 TIGRFAM: Branched-chain amino acid aminotransferase II; KEGG: nml:Namu_1869 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase 4887726 10366405 Psed_4561 Pseudonocardia dioxanivorans CB1190 branched-chain amino acid aminotransferase YP_004334566.1 4886620 R 675635 CDS YP_004334567.1 331698328 10366406 complement(4887802..4889091) 1 NC_015312.1 PFAM: Amino acid permease domain; KEGG: stp:Strop_0237 amino acid permease-associated region; amino acid permease 4889091 10366406 Psed_4562 Pseudonocardia dioxanivorans CB1190 amino acid permease YP_004334567.1 4887802 R 675635 CDS YP_004334568.1 331698329 10366407 4889236..4890741 1 NC_015312.1 HAMAP: Peptidase, M17, probable cytosol aminopeptidase; KEGG: sen:SACE_1642 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 4890741 10366407 Psed_4563 Pseudonocardia dioxanivorans CB1190 cytosol aminopeptidase YP_004334568.1 4889236 D 675635 CDS YP_004334569.1 331698330 10366408 complement(4890765..4891133) 1 NC_015312.1 KEGG: mva:Mvan_3578 hypothetical protein; hypothetical protein 4891133 10366408 Psed_4564 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334569.1 4890765 R 675635 CDS YP_004334570.1 331698331 10366409 4891335..4892729 1 NC_015312.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: svi:Svir_10500 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 4892729 10366409 Psed_4565 Pseudonocardia dioxanivorans CB1190 dihydrolipoamide dehydrogenase YP_004334570.1 4891335 D 675635 CDS YP_004334571.1 331698332 10366410 4892785..4894629 1 NC_015312.1 KEGG: sen:SACE_1638 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; 2-oxoglutarate dehydrogenase E2 4894629 10366410 Psed_4566 Pseudonocardia dioxanivorans CB1190 2-oxoglutarate dehydrogenase E2 YP_004334571.1 4892785 D 675635 CDS YP_004334572.1 331698333 10366411 4894712..4895596 1 NC_015312.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: rop:ROP_08790 hypothetical protein; hypothetical protein 4895596 10366411 Psed_4567 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334572.1 4894712 D 675635 CDS YP_004334573.1 331698334 10366412 4895626..4896393 1 NC_015312.1 PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: svi:Svir_10460 lipoate-protein ligase B; Octanoyltransferase 4896393 10366412 Psed_4568 Pseudonocardia dioxanivorans CB1190 Octanoyltransferase YP_004334573.1 4895626 D 675635 CDS YP_004334574.1 331698335 10366413 complement(4896431..4897090) 1 NC_015312.1 KEGG: rer:RER_01610 hypothetical protein; hypothetical protein 4897090 10366413 Psed_4569 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334574.1 4896431 R 675635 CDS YP_004334575.1 331698336 10366414 complement(4897170..4898105) 1 NC_015312.1 KEGG: amd:AMED_2163 monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 4898105 10366414 Psed_4570 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004334575.1 4897170 R 675635 CDS YP_004334576.1 331698337 10366415 4898249..4899253 1 NC_015312.1 KEGG: amd:AMED_1817 lipoic acid synthetase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB; lipoyl synthase 4899253 10366415 Psed_4571 Pseudonocardia dioxanivorans CB1190 lipoyl synthase YP_004334576.1 4898249 D 675635 CDS YP_004334577.1 331698338 10366416 4899271..4900005 1 NC_015312.1 KEGG: rop:ROP_08820 hypothetical membrane protein; hypothetical protein 4900005 10366416 Psed_4572 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334577.1 4899271 D 675635 CDS YP_004334578.1 331698339 10366417 complement(4900066..4900539) 1 NC_015312.1 PFAM: RDD; KEGG: mva:Mvan_3584 RDD domain-containing protein; RDD domain-containing protein 4900539 10366417 Psed_4573 Pseudonocardia dioxanivorans CB1190 RDD domain-containing protein YP_004334578.1 4900066 R 675635 CDS YP_004334579.1 331698340 10366418 4900722..4902143 1 NC_015312.1 TIGRFAM: Glutamine synthetase type I; KEGG: ami:Amir_0925 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; glutamine synthetase 4902143 10366418 Psed_4574 Pseudonocardia dioxanivorans CB1190 glutamine synthetase YP_004334579.1 4900722 D 675635 CDS YP_004334580.1 331698341 10366419 4902377..4903081 1 NC_015312.1 KEGG: sro:Sros_2262 hypothetical protein; hypothetical protein 4903081 10366419 Psed_4575 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334580.1 4902377 D 675635 CDS YP_004334581.1 331698342 10366420 complement(4903105..4903878) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: ach:Achl_3639 transcriptional regulator, TetR family; TetR family transcriptional regulator 4903878 10366420 Psed_4576 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334581.1 4903105 R 675635 CDS YP_004334582.1 331698343 10366421 4904028..4904228 1 NC_015312.1 KEGG: pca:Pcar_2806 cold shock proteins; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock protein DNA-binding protein 4904228 10366421 Psed_4577 Pseudonocardia dioxanivorans CB1190 cold-shock protein DNA-binding protein YP_004334582.1 4904028 D 675635 CDS YP_004334583.1 331698344 10366422 4904298..4905245 1 NC_015312.1 KEGG: sen:SACE_6758 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 4905245 10366422 Psed_4578 Pseudonocardia dioxanivorans CB1190 stearoyl-CoA 9-desaturase YP_004334583.1 4904298 D 675635 CDS YP_004334584.1 331698345 10366423 complement(4905291..4905950) 1 NC_015312.1 PFAM: Protein of unknown function DUF1211, TMEM175; KEGG: cwo:Cwoe_0449 protein of unknown function DUF1211; hypothetical protein 4905950 10366423 Psed_4579 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334584.1 4905291 R 675635 CDS YP_004334585.1 331698346 10366424 4906032..4907465 1 NC_015312.1 KEGG: gob:Gobs_3434 hypothetical protein; HAMAP: Uncharacterised protein family UPF0061; PFAM: Uncharacterised protein family UPF0061; hypothetical protein 4907465 10366424 Psed_4580 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334585.1 4906032 D 675635 CDS YP_004334586.1 331698347 10366425 4907611..4910343 1 NC_015312.1 TIGRFAM: Pyruvate, phosphate dikinase; KEGG: nml:Namu_4080 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; pyruvate, phosphate dikinase 4910343 10366425 Psed_4581 Pseudonocardia dioxanivorans CB1190 pyruvate, phosphate dikinase YP_004334586.1 4907611 D 675635 CDS YP_004334587.1 331698348 10366426 complement(4910503..4914330) 1 NC_015312.1 PFAM: Acriflavin resistance protein; KEGG: sro:Sros_4438 hypothetical protein; acriflavin resistance protein 4914330 10366426 Psed_4582 Pseudonocardia dioxanivorans CB1190 acriflavin resistance protein YP_004334587.1 4910503 R 675635 CDS YP_004334588.1 331698349 10366427 complement(4914414..4914842) 1 NC_015312.1 KEGG: sro:Sros_4541 hypothetical protein; hypothetical protein 4914842 10366427 Psed_4583 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334588.1 4914414 R 675635 CDS YP_004334589.1 331698350 10366428 complement(4914863..4915570) 1 NC_015312.1 KEGG: sro:Sros_6431 hypothetical protein; hypothetical protein 4915570 10366428 Psed_4584 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334589.1 4914863 R 675635 CDS YP_004334590.1 331698351 10366429 complement(4916205..4918154) 1 NC_015312.1 manually curated; KEGG: sti:Sthe_1357 peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase active site domain-containing protein 4918154 10366429 Psed_4585 Pseudonocardia dioxanivorans CB1190 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_004334590.1 4916205 R 675635 CDS YP_004334591.1 331698352 10366430 complement(4918440..4918772) 1 NC_015312.1 hypothetical protein 4918772 10366430 Psed_4586 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334591.1 4918440 R 675635 CDS YP_004334592.1 331698353 10366431 complement(4918769..4919533) 1 NC_015312.1 KEGG: amd:AMED_2939 hypothetical protein; hypothetical protein 4919533 10366431 Psed_4587 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334592.1 4918769 R 675635 CDS YP_004334593.1 331698354 10366432 4919630..4919983 1 NC_015312.1 KEGG: nml:Namu_5275 hypothetical protein; hypothetical protein 4919983 10366432 Psed_4588 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334593.1 4919630 D 675635 CDS YP_004334594.1 331698355 10366433 complement(4920102..4920872) 1 NC_015312.1 KEGG: amd:AMED_2353 succinate dehydrogenase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; PFAM: Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 4920872 10366433 Psed_4589 Pseudonocardia dioxanivorans CB1190 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004334594.1 4920102 R 675635 CDS YP_004334595.1 331698356 10366434 complement(4920869..4922815) 1 NC_015312.1 KEGG: kfl:Kfla_5537 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase (ubiquinone) 4922815 10366434 Psed_4590 Pseudonocardia dioxanivorans CB1190 succinate dehydrogenase (ubiquinone) YP_004334595.1 4920869 R 675635 CDS YP_004334596.1 331698357 10366435 complement(4922821..4923627) 1 NC_015312.1 KEGG: msp:Mspyr1_03630 hypothetical protein; hypothetical protein 4923627 10366435 Psed_4591 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334596.1 4922821 R 675635 CDS YP_004334597.1 331698358 10366436 complement(4923870..4924625) 1 NC_015312.1 KEGG: tcu:Tcur_1121 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; PFAM: 4Fe-4S binding domain; Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 4924625 10366436 Psed_4592 Pseudonocardia dioxanivorans CB1190 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004334597.1 4923870 R 675635 CDS YP_004334598.1 331698359 10366437 complement(4924622..4926565) 1 NC_015312.1 TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; KEGG: mil:ML5_2258 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase or fumarate reductase, flavoprotein subunit 4926565 10366437 Psed_4593 Pseudonocardia dioxanivorans CB1190 succinate dehydrogenase or fumarate reductase, flavoprotein subunit YP_004334598.1 4924622 R 675635 CDS YP_004334599.1 331698360 10366438 complement(4926577..4927233) 1 NC_015312.1 TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; KEGG: saq:Sare_1707 succinate dehydrogenase/fumarate reductase cytochrome b subunit; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 4927233 10366438 Psed_4594 Pseudonocardia dioxanivorans CB1190 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_004334599.1 4926577 R 675635 CDS YP_004334600.1 331698361 10366439 4927391..4928335 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nda:Ndas_3924 transcriptional regulator, LysR family; LysR family transcriptional regulator 4928335 10366439 Psed_4595 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004334600.1 4927391 D 675635 CDS YP_004334601.1 331698362 10366440 complement(4929045..4930367) 1 NC_015312.1 KEGG: mau:Micau_1534 regulatory protein RecX; HAMAP: Regulatory protein RecX; PFAM: Regulatory protein RecX; Regulatory protein recX 4930367 10366440 Psed_4596 Pseudonocardia dioxanivorans CB1190 Regulatory protein recX YP_004334601.1 4929045 R 675635 CDS YP_004334602.1 331698363 10366441 complement(4930372..4931415) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: mjl:Mjls_2134 recombinase A; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; recombinase A 4931415 10366441 Psed_4597 Pseudonocardia dioxanivorans CB1190 recombinase A YP_004334602.1 4930372 R 675635 CDS YP_004334603.1 331698364 10366442 complement(4931770..4931964) 1 NC_015312.1 KEGG: nml:Namu_3995 hypothetical protein; hypothetical protein 4931964 10366442 Psed_4598 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334603.1 4931770 R 675635 CDS YP_004334604.1 331698365 10366443 4932021..4933391 1 NC_015312.1 PFAM: CoA-transferase III; KEGG: tbi:Tbis_0993 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4933391 10366443 Psed_4599 Pseudonocardia dioxanivorans CB1190 L-carnitine dehydratase/bile acid-inducible protein F YP_004334604.1 4932021 D 675635 CDS YP_004334605.1 331698366 10366444 4933402..4933551 1 NC_015312.1 hypothetical protein 4933551 10366444 Psed_4600 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334605.1 4933402 D 675635 CDS YP_004334606.1 331698367 10366445 complement(4933564..4934169) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_4955 transcriptional regulator, TetR family; TetR family transcriptional regulator 4934169 10366445 Psed_4601 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334606.1 4933564 R 675635 CDS YP_004334607.1 331698368 10366446 4934228..4935166 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: nda:Ndas_1398 protein of unknown function DUF6 transmembrane; hypothetical protein 4935166 10366446 Psed_4602 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334607.1 4934228 D 675635 CDS YP_004334608.1 331698369 10366447 4935117..4939889 1 NC_015312.1 KEGG: ami:Amir_1413 DEAD/H associated domain protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal; DEAD/H associated domain-containing protein 4939889 10366447 Psed_4603 Pseudonocardia dioxanivorans CB1190 DEAD/H associated domain-containing protein YP_004334608.1 4935117 D 675635 CDS YP_004334609.1 331698370 10366448 4940319..4941290 1 NC_015312.1 KEGG: req:REQ_00430 protein; hypothetical protein 4941290 10366448 Psed_4604 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334609.1 4940319 D 675635 CDS YP_004334610.1 331698371 10366449 4941707..4943689 1 NC_015312.1 TIGRFAM: Acetoacetyl-CoA synthase; KEGG: amd:AMED_3268 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; acetoacetyl-CoA synthase 4943689 10366449 Psed_4605 Pseudonocardia dioxanivorans CB1190 acetoacetyl-CoA synthase YP_004334610.1 4941707 D 675635 CDS YP_004334611.1 331698372 10366450 complement(4943802..4944476) 1 NC_015312.1 hypothetical protein 4944476 10366450 Psed_4606 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334611.1 4943802 R 675635 CDS YP_004334612.1 331698373 10366453 complement(4945736..4945849) 1 NC_015312.1 hypothetical protein 4945849 10366453 Psed_4609 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334612.1 4945736 R 675635 CDS YP_004334613.1 331698374 10366454 complement(4945846..4946091) 1 NC_015312.1 hypothetical protein 4946091 10366454 Psed_4610 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334613.1 4945846 R 675635 CDS YP_004334614.1 331698375 10366455 4946156..4946740 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sna:Snas_2881 transcriptional regulator, TetR family; TetR family transcriptional regulator 4946740 10366455 Psed_4611 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334614.1 4946156 D 675635 CDS YP_004334615.1 331698376 10366457 complement(4947403..4948578) 1 NC_015312.1 KEGG: req:REQ_47430 integral membrane protein; TIGRFAM: Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC; hypothetical protein 4948578 10366457 Psed_4613 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334615.1 4947403 R 675635 CDS YP_004334616.1 331698377 10366458 complement(4948696..4948986) 1 NC_015312.1 hypothetical protein 4948986 10366458 Psed_4614 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334616.1 4948696 R 675635 CDS YP_004334617.1 331698378 10366459 complement(4949031..4949669) 1 NC_015312.1 KEGG: cai:Caci_0175 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4949669 10366459 Psed_4615 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334617.1 4949031 R 675635 CDS YP_004334618.1 331698379 10366460 complement(4949666..4950949) 1 NC_015312.1 KEGG: bcv:Bcav_3542 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 4950949 10366460 Psed_4616 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004334618.1 4949666 R 675635 CDS YP_004334619.1 331698380 10366461 complement(4950958..4951749) 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_3543 ABC-2 type transporter; ABC transporter 4951749 10366461 Psed_4617 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004334619.1 4950958 R 675635 CDS YP_004334620.1 331698381 10366462 complement(4951746..4952651) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: bcv:Bcav_3544 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 4952651 10366462 Psed_4618 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004334620.1 4951746 R 675635 CDS YP_004334621.1 331698382 10366463 4952884..4953732 1 NC_015312.1 PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: ami:Amir_5790 DNA glycosylase/AP lyase, H2TH DNA-binding; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-(apurinic or apyrimidinic site) lyase 4953732 10366463 Psed_4619 Pseudonocardia dioxanivorans CB1190 DNA-(apurinic or apyrimidinic site) lyase YP_004334621.1 4952884 D 675635 CDS YP_004334622.1 331698383 10366464 complement(4953796..4954614) 1 NC_015312.1 PFAM: PspA/IM30; KEGG: amd:AMED_6280 phage shock protein A; phage shock protein A, PspA 4954614 10366464 Psed_4620 Pseudonocardia dioxanivorans CB1190 phage shock protein A, PspA YP_004334622.1 4953796 R 675635 CDS YP_004334623.1 331698384 10366465 complement(4954923..4955294) 1 NC_015312.1 KEGG: sen:SACE_5879 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 4955294 10366465 Psed_4621 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004334623.1 4954923 R 675635 CDS YP_004334624.1 331698385 10366466 complement(4955490..4956107) 1 NC_015312.1 KEGG: rop:ROP_67400 phosphatidylglycerophosphate synthase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 4956107 10366466 Psed_4622 Pseudonocardia dioxanivorans CB1190 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004334624.1 4955490 R 675635 CDS YP_004334625.1 331698386 10366467 complement(4956121..4957608) 1 NC_015312.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: ami:Amir_5800 MiaB-like tRNA modifying enzyme YliG; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; 30S ribosomal protein S12 methylthiotransferase 4957608 10366467 Psed_4623 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S12 methylthiotransferase YP_004334625.1 4956121 R 675635 CDS YP_004334626.1 331698387 10366468 4957653..4958150 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: nfa:nfa38590 N-acetylglutamate synthase; GCN5-like N-acetyltransferase 4958150 10366468 Psed_4624 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334626.1 4957653 D 675635 CDS YP_004334627.1 331698388 10366469 4958224..4959045 1 NC_015312.1 SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: fre:Franean1_7200 AraC family transcriptional regulator; AraC family transcriptional regulator 4959045 10366469 Psed_4625 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004334627.1 4958224 D 675635 CDS YP_004334628.1 331698389 10366470 4959101..4959604 1 NC_015312.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: svi:Svir_22350 predicted rRNA methylase SpoU family; tRNA/rRNA methyltransferase SpoU 4959604 10366470 Psed_4626 Pseudonocardia dioxanivorans CB1190 tRNA/rRNA methyltransferase SpoU YP_004334628.1 4959101 D 675635 CDS YP_004334629.1 331698390 10366471 complement(4959592..4960404) 1 NC_015312.1 KEGG: sco:SCO2566 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein 4960404 10366471 Psed_4627 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334629.1 4959592 R 675635 CDS YP_004334630.1 331698391 10366472 complement(4960662..4963010) 1 NC_015312.1 KEGG: sen:SACE_5889 cell division FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; DNA translocase FtsK 4963010 10366472 Psed_4628 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004334630.1 4960662 R 675635 CDS YP_004334631.1 331698392 10366473 complement(4963312..4963908) 1 NC_015312.1 PFAM: Protein of unknown function DUF2249; Cupin 2, conserved barrel; KEGG: nca:Noca_4862 hypothetical protein; hypothetical protein 4963908 10366473 Psed_4629 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334631.1 4963312 R 675635 CDS YP_004334632.1 331698393 10366474 4963949..4964293 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: mav:MAV_3500 ferredoxin FdxA; 4Fe-4S ferredoxin 4964293 10366474 Psed_4630 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004334632.1 4963949 D 675635 CDS YP_004334633.1 331698394 10366475 4964290..4964970 1 NC_015312.1 PFAM: LexA, DNA-binding domain; KEGG: nca:Noca_4860 transcriptional regulator; transcriptional regulator 4964970 10366475 Psed_4631 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004334633.1 4964290 D 675635 CDS YP_004334634.1 331698395 10366476 4964970..4965395 1 NC_015312.1 KEGG: rha:RHA1_ro08094 hypothetical protein; hypothetical protein 4965395 10366476 Psed_4632 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334634.1 4964970 D 675635 CDS YP_004334635.1 331698396 10366477 4965395..4965793 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: nml:Namu_3635 MarR family transcriptional regulator; cupin 4965793 10366477 Psed_4633 Pseudonocardia dioxanivorans CB1190 cupin YP_004334635.1 4965395 D 675635 CDS YP_004334636.1 331698397 10366478 4965965..4966849 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 4966849 10366478 Psed_4634 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004334636.1 4965965 D 675635 CDS YP_004334637.1 331698398 10366479 complement(4966874..4967776) 1 NC_015312.1 PFAM: Isocitrate lyase/phosphorylmutase; KEGG: aco:Amico_1318 carboxyvinyl-carboxyphosphonatephosphorylmutase; isocitrate lyase and phosphorylmutase 4967776 10366479 Psed_4635 Pseudonocardia dioxanivorans CB1190 isocitrate lyase and phosphorylmutase YP_004334637.1 4966874 R 675635 CDS YP_004334638.1 331698399 10366480 4967901..4968602 1 NC_015312.1 KEGG: fri:FraEuI1c_4418 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 4968602 10366480 Psed_4636 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334638.1 4967901 D 675635 CDS YP_004334639.1 331698400 10366481 4968599..4970644 1 NC_015312.1 KEGG: gbr:Gbro_2860 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 4970644 10366481 Psed_4637 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004334639.1 4968599 D 675635 CDS YP_004334640.1 331698401 10366482 4970651..4972549 1 NC_015312.1 KEGG: gbr:Gbro_2859 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 4972549 10366482 Psed_4638 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004334640.1 4970651 D 675635 CDS YP_004334641.1 331698402 10366483 4972546..4973166 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: gbr:Gbro_2858 isochorismatase hydrolase; isochorismatase hydrolase 4973166 10366483 Psed_4639 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004334641.1 4972546 D 675635 CDS YP_004334642.1 331698403 10366484 complement(4973235..4973420) 1 NC_015312.1 hypothetical protein 4973420 10366484 Psed_4640 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334642.1 4973235 R 675635 CDS YP_004334643.1 331698404 10366485 complement(4973446..4974843) 1 NC_015312.1 PFAM: Amidase; KEGG: sna:Snas_3274 amidase; amidase 4974843 10366485 Psed_4641 Pseudonocardia dioxanivorans CB1190 amidase YP_004334643.1 4973446 R 675635 CDS YP_004334644.1 331698405 10366486 complement(4974858..4976291) 1 NC_015312.1 PFAM: Amidase; KEGG: sti:Sthe_2520 amidase; amidase 4976291 10366486 Psed_4642 Pseudonocardia dioxanivorans CB1190 amidase YP_004334644.1 4974858 R 675635 CDS YP_004334645.1 331698406 10366488 complement(4977775..4979358) 1 NC_015312.1 PFAM: Amidase; KEGG: htu:Htur_4354 amidase; amidase 4979358 10366488 Psed_4644 Pseudonocardia dioxanivorans CB1190 amidase YP_004334645.1 4977775 R 675635 CDS YP_004334646.1 331698407 10366489 complement(4979478..4981103) 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mdi:METDI1865 dipeptide transporter; periplasmic binding component of ABC superfamily (DppA-like); ABC transporter substrate-binding protein 4981103 10366489 Psed_4645 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004334646.1 4979478 R 675635 CDS YP_004334647.1 331698408 10366490 complement(4981197..4982147) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: gtn:GTNG_0477 oligopeptide ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 4982147 10366490 Psed_4646 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004334647.1 4981197 R 675635 CDS YP_004334648.1 331698409 10366491 complement(4982144..4983175) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: nfa:nfa1670 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 4983175 10366491 Psed_4647 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004334648.1 4982144 R 675635 CDS YP_004334649.1 331698410 10366492 complement(4983172..4984065) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120432 permease component of ABC transporter; ABC transporter permease 4984065 10366492 Psed_4648 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334649.1 4983172 R 675635 CDS YP_004334650.1 331698411 10366493 complement(4984117..4985061) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1085 dipeptide transport system permease DppB; ABC transporter permease 4985061 10366493 Psed_4649 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334650.1 4984117 R 675635 CDS YP_004334651.1 331698412 10366494 complement(4985061..4985951) 1 NC_015312.1 KEGG: nfa:nfa24460 transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 4985951 10366494 Psed_4650 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334651.1 4985061 R 675635 CDS YP_004334652.1 331698413 10366495 complement(4986047..4987831) 1 NC_015312.1 KEGG: ami:Amir_5806 beta-lactamase domain protein; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4987831 10366495 Psed_4651 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004334652.1 4986047 R 675635 CDS YP_004334653.1 331698414 10366496 complement(4987828..4988769) 1 NC_015312.1 PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: svi:Svir_25250 dihydrodipicolinate synthase; dihydrodipicolinate synthase 4988769 10366496 Psed_4652 Pseudonocardia dioxanivorans CB1190 dihydrodipicolinate synthase YP_004334653.1 4987828 R 675635 CDS YP_004334654.1 331698415 10366497 complement(4989000..4989626) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03085; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: sen:SACE_5900 hypothetical protein; hypothetical protein 4989626 10366497 Psed_4653 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334654.1 4989000 R 675635 CDS YP_004334655.1 331698416 10366498 complement(4989871..4990623) 1 NC_015312.1 PFAM: Thymidylate synthase ThyX; TIGRFAM: Thymidylate synthase ThyX; HAMAP: Thymidylate synthase ThyX; KEGG: sen:SACE_5902 FAD-dependent thymidylate synthase; thymidylate synthase 4990623 10366498 Psed_4654 Pseudonocardia dioxanivorans CB1190 thymidylate synthase YP_004334655.1 4989871 R 675635 CDS YP_004334656.1 331698417 10366499 4990783..4991334 1 NC_015312.1 PFAM: Protein of unknown function DUF1778; KEGG: sen:SACE_5903 hypothetical protein; hypothetical protein 4991334 10366499 Psed_4655 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334656.1 4990783 D 675635 CDS YP_004334657.1 331698418 10366500 4991340..4992392 1 NC_015312.1 KEGG: ami:Amir_5813 hypothetical protein; hypothetical protein 4992392 10366500 Psed_4656 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334657.1 4991340 D 675635 CDS YP_004334658.1 331698419 10366501 complement(4992632..4993858) 1 NC_015312.1 PFAM: Protein of unknown function DUF1006; KEGG: amd:AMED_6308 hypothetical protein; hypothetical protein 4993858 10366501 Psed_4657 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334658.1 4992632 R 675635 CDS YP_004334659.1 331698420 10366502 complement(4993855..4994868) 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: sro:Sros_0382 hypothetical protein; hypothetical protein 4994868 10366502 Psed_4658 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334659.1 4993855 R 675635 CDS YP_004334660.1 331698421 10366503 4994953..4995504 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_6309 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4995504 10366503 Psed_4659 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334660.1 4994953 D 675635 CDS YP_004334661.1 331698422 10366504 complement(4995510..4996283) 1 NC_015312.1 PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase, bacterial/plant; KEGG: rop:ROP_67260 dihydrodipicolinate reductase; dihydrodipicolinate reductase 4996283 10366504 Psed_4660 Pseudonocardia dioxanivorans CB1190 dihydrodipicolinate reductase YP_004334661.1 4995510 R 675635 CDS YP_004334662.1 331698423 10366505 complement(4996280..4996753) 1 NC_015312.1 PFAM: Protein of unknown function DUF456; KEGG: nfa:nfa53640 hypothetical protein; hypothetical protein 4996753 10366505 Psed_4661 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334662.1 4996280 R 675635 CDS YP_004334663.1 331698424 10366506 complement(4996788..4998128) 1 NC_015312.1 KEGG: sen:SACE_5913 zinc protease; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; processing peptidase 4998128 10366506 Psed_4662 Pseudonocardia dioxanivorans CB1190 processing peptidase YP_004334663.1 4996788 R 675635 CDS YP_004334664.1 331698425 10366507 complement(4998125..5000377) 1 NC_015312.1 KEGG: ami:Amir_5823 polynucleotide phosphorylase/polyadenylase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; TIGRFAM: Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; polyribonucleotide nucleotidyltransferase 5000377 10366507 Psed_4663 Pseudonocardia dioxanivorans CB1190 polyribonucleotide nucleotidyltransferase YP_004334664.1 4998125 R 675635 CDS YP_004334665.1 331698426 10366508 complement(5000660..5000929) 1 NC_015312.1 KEGG: mjl:Mjls_2082 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 5000929 10366508 Psed_4664 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S15 YP_004334665.1 5000660 R 675635 CDS YP_004334666.1 331698427 10366509 complement(5001129..5001830) 1 NC_015312.1 KEGG: ami:Amir_5826 hypothetical protein; hypothetical protein 5001830 10366509 Psed_4665 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334666.1 5001129 R 675635 CDS YP_004334667.1 331698428 10366510 complement(5001927..5002853) 1 NC_015312.1 SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: req:REQ_19270 riboflavin kinase; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF 5002853 10366510 Psed_4666 Pseudonocardia dioxanivorans CB1190 riboflavin biosynthesis protein RibF YP_004334667.1 5001927 R 675635 CDS YP_004334668.1 331698429 10366511 complement(5002864..5003760) 1 NC_015312.1 TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: ami:Amir_5828 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal; tRNA pseudouridine synthase B 5003760 10366511 Psed_4667 Pseudonocardia dioxanivorans CB1190 tRNA pseudouridine synthase B YP_004334668.1 5002864 R 675635 CDS YP_004334669.1 331698430 10366512 complement(5004109..5005473) 1 NC_015312.1 KEGG: amd:AMED_6327 DNA-damage-inducible protein F; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 5005473 10366512 Psed_4668 Pseudonocardia dioxanivorans CB1190 MATE efflux family protein YP_004334669.1 5004109 R 675635 CDS YP_004334670.1 331698431 10366513 complement(5005470..5006129) 1 NC_015312.1 KEGG: svi:Svir_19850 phospholipid N-methyltransferase; phospholipid N-methyltransferase 5006129 10366513 Psed_4669 Pseudonocardia dioxanivorans CB1190 phospholipid N-methyltransferase YP_004334670.1 5005470 R 675635 CDS YP_004334671.1 331698432 10366514 complement(5006165..5007157) 1 NC_015312.1 PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: ami:Amir_5831 phosphoesterase RecJ domain protein; phosphoesterase RecJ domain-containing protein 5007157 10366514 Psed_4670 Pseudonocardia dioxanivorans CB1190 phosphoesterase RecJ domain-containing protein YP_004334671.1 5006165 R 675635 CDS YP_004334672.1 331698433 10366515 complement(5007157..5007606) 1 NC_015312.1 TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: svi:Svir_14590 ribosome-binding factor A; PFAM: Ribosome-binding factor A; ribosome-binding factor A 5007606 10366515 Psed_4671 Pseudonocardia dioxanivorans CB1190 ribosome-binding factor A YP_004334672.1 5007157 R 675635 CDS YP_004334673.1 331698434 10366516 complement(5007665..5007961) 1 NC_015312.1 PFAM: Protein of unknown function DUF503; KEGG: sen:SACE_5925 hypothetical protein; hypothetical protein 5007961 10366516 Psed_4672 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334673.1 5007665 R 675635 CDS YP_004334674.1 331698435 10366517 complement(5008016..5009851) 1 NC_015312.1 TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; KEGG: ami:Amir_5834 translation initiation factor IF-2; SMART: Ras small GTPase, Ras type; translation initiation factor IF-2 5009851 10366517 Psed_4673 Pseudonocardia dioxanivorans CB1190 translation initiation factor IF-2 YP_004334674.1 5008016 R 675635 CDS YP_004334675.1 331698436 10366519 complement(5011565..5012611) 1 NC_015312.1 TIGRFAM: Transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal; KEGG: ami:Amir_5836 transcription elongation factor NusA; SMART: RNA-binding domain, S1; K Homology; NusA antitermination factor 5012611 10366519 Psed_4675 Pseudonocardia dioxanivorans CB1190 NusA antitermination factor YP_004334675.1 5011565 R 675635 CDS YP_004334676.1 331698437 10366520 complement(5012608..5013138) 1 NC_015312.1 KEGG: svi:Svir_14540 hypothetical protein; HAMAP: Ribosome maturation factor RimP; PFAM: Ribosome maturation factor RimP; ribosome maturation factor rimP 5013138 10366520 Psed_4676 Pseudonocardia dioxanivorans CB1190 ribosome maturation factor rimP YP_004334676.1 5012608 R 675635 CDS YP_004334677.1 331698438 10366521 5013283..5013792 1 NC_015312.1 KEGG: rer:RER_26280 hypothetical protein; hypothetical protein 5013792 10366521 Psed_4677 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334677.1 5013283 D 675635 CDS YP_004334678.1 331698439 10366522 5013789..5014259 1 NC_015312.1 KEGG: amd:AMED_6342 hypothetical protein; hypothetical protein 5014259 10366522 Psed_4678 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334678.1 5013789 D 675635 CDS YP_004334679.1 331698440 10366523 complement(5014285..5015316) 1 NC_015312.1 PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: ami:Amir_5841 aminotransferase class V; class V aminotransferase 5015316 10366523 Psed_4679 Pseudonocardia dioxanivorans CB1190 class V aminotransferase YP_004334679.1 5014285 R 675635 CDS YP_004334680.1 331698441 10366524 5015356..5015766 1 NC_015312.1 KEGG: sen:SACE_5933 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047; hypothetical protein 5015766 10366524 Psed_4680 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334680.1 5015356 D 675635 CDS YP_004334681.1 331698442 10366525 complement(5015769..5016581) 1 NC_015312.1 PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; KEGG: scb:SCAB_53331 hypothetical protein; intradiol ring-cleavage dioxygenase 5016581 10366525 Psed_4681 Pseudonocardia dioxanivorans CB1190 intradiol ring-cleavage dioxygenase YP_004334681.1 5015769 R 675635 CDS YP_004334682.1 331698443 10366526 complement(5016682..5018415) 1 NC_015312.1 PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase, class IIa, bacterial; KEGG: svi:Svir_10160 prolyl-tRNA synthetase; prolyl-tRNA synthetase 5018415 10366526 Psed_4682 Pseudonocardia dioxanivorans CB1190 prolyl-tRNA synthetase YP_004334682.1 5016682 R 675635 CDS YP_004334683.1 331698444 10366527 5018666..5019613 1 NC_015312.1 KEGG: amd:AMED_5707 cold shock protein CspA; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 5019613 10366527 Psed_4683 Pseudonocardia dioxanivorans CB1190 cold-shock DNA-binding domain-containing protein YP_004334683.1 5018666 D 675635 CDS YP_004334684.1 331698445 10366528 complement(5019725..5020342) 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: kfl:Kfla_4294 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 5020342 10366528 Psed_4684 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004334684.1 5019725 R 675635 CDS YP_004334685.1 331698446 10366529 complement(5020359..5021513) 1 NC_015312.1 KEGG: tfu:Tfu_2822 homoserine O-acetyltransferase; manually curated; TIGRFAM: Homoserine acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; HAMAP: Homoserine acetyltransferase; homoserine O-acetyltransferase 5021513 10366529 Psed_4685 Pseudonocardia dioxanivorans CB1190 homoserine O-acetyltransferase YP_004334685.1 5020359 R 675635 CDS YP_004334686.1 331698447 10366530 complement(5021510..5022823) 1 NC_015312.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: amd:AMED_7929 O-acetylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-acetylhomoserine/O-acetylserine sulfhydrylase 5022823 10366530 Psed_4686 Pseudonocardia dioxanivorans CB1190 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004334686.1 5021510 R 675635 CDS YP_004334687.1 331698448 10366531 5023131..5023877 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0246; KEGG: mjl:Mjls_2726 hypothetical protein; hypothetical protein 5023877 10366531 Psed_4687 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334687.1 5023131 D 675635 CDS YP_004334688.1 331698449 10366532 5024035..5025153 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: amd:AMED_3934 hypothetical protein; polysaccharide deacetylase 5025153 10366532 Psed_4688 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004334688.1 5024035 D 675635 CDS YP_004334689.1 331698450 10366533 5025562..5026530 1 NC_015312.1 KEGG: amd:AMED_2059 RIO kinase 1; PFAM: RIO-like kinase; SMART: RIO kinase; RIO-like kinase 5026530 10366533 Psed_4689 Pseudonocardia dioxanivorans CB1190 RIO-like kinase YP_004334689.1 5025562 D 675635 CDS YP_004334690.1 331698451 10366534 5026742..5028256 1 NC_015312.1 KEGG: ami:Amir_5853 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 5028256 10366534 Psed_4690 Pseudonocardia dioxanivorans CB1190 DEAD/DEAH box helicase domain-containing protein YP_004334690.1 5026742 D 675635 CDS YP_004334691.1 331698452 10366535 complement(5028430..5029527) 1 NC_015312.1 KEGG: ace:Acel_1446 cysteine--tRNA ligase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteine--tRNA ligase 5029527 10366535 Psed_4691 Pseudonocardia dioxanivorans CB1190 Cysteine--tRNA ligase YP_004334691.1 5028430 R 675635 CDS YP_004334692.1 331698453 10366536 complement(5029529..5030038) 1 NC_015312.1 KEGG: cai:Caci_7191 hypothetical protein; hypothetical protein 5030038 10366536 Psed_4692 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334692.1 5029529 R 675635 CDS YP_004334693.1 331698454 10366537 complement(5030165..5030659) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ami:Amir_5865 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 5030659 10366537 Psed_4693 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334693.1 5030165 R 675635 CDS YP_004334694.1 331698455 10366538 5030716..5032116 1 NC_015312.1 TIGRFAM: Mycothione reductase; KEGG: rha:RHA1_ro06610 mycothione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mycothione reductase 5032116 10366538 Psed_4694 Pseudonocardia dioxanivorans CB1190 mycothione reductase YP_004334694.1 5030716 D 675635 CDS YP_004334695.1 331698456 10366539 5032229..5033197 1 NC_015312.1 KEGG: ami:Amir_0660 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 5033197 10366539 Psed_4695 Pseudonocardia dioxanivorans CB1190 stearoyl-CoA 9-desaturase YP_004334695.1 5032229 D 675635 CDS YP_004334696.1 331698457 10366540 complement(5033205..5033981) 1 NC_015312.1 KEGG: amd:AMED_6935 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 5033981 10366540 Psed_4696 Pseudonocardia dioxanivorans CB1190 phospholipid/glycerol acyltransferase YP_004334696.1 5033205 R 675635 CDS YP_004334697.1 331698458 10366541 5034203..5034928 1 NC_015312.1 KEGG: sen:SACE_6750 hypothetical protein; hypothetical protein 5034928 10366541 Psed_4697 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334697.1 5034203 D 675635 CDS YP_004334698.1 331698459 10366542 5034925..5036214 1 NC_015312.1 PFAM: Amine oxidase; KEGG: sgr:SGR_5877 amine oxidoreductase; amine oxidase 5036214 10366542 Psed_4698 Pseudonocardia dioxanivorans CB1190 amine oxidase YP_004334698.1 5034925 D 675635 CDS YP_004334699.1 331698460 10366543 5036211..5036984 1 NC_015312.1 PFAM: Protein of unknown function DUF1365; KEGG: rer:RER_23220 hypothetical protein; hypothetical protein 5036984 10366543 Psed_4699 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334699.1 5036211 D 675635 CDS YP_004334700.1 331698461 10366544 5036981..5038237 1 NC_015312.1 KEGG: amd:AMED_2870 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5038237 10366544 Psed_4700 Pseudonocardia dioxanivorans CB1190 cyclopropane-fatty-acyl-phospholipid synthase YP_004334700.1 5036981 D 675635 CDS YP_004334701.1 331698462 10366545 5038297..5039673 1 NC_015312.1 KEGG: amd:AMED_2950 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5039673 10366545 Psed_4701 Pseudonocardia dioxanivorans CB1190 cyclopropane-fatty-acyl-phospholipid synthase YP_004334701.1 5038297 D 675635 CDS YP_004334702.1 331698463 10366546 5039670..5040503 1 NC_015312.1 PFAM: Protein of unknown function DUF1295; KEGG: cai:Caci_4267 protein of unknown function DUF1295; hypothetical protein 5040503 10366546 Psed_4702 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334702.1 5039670 D 675635 CDS YP_004334703.1 331698464 10366547 5040570..5041034 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: tcu:Tcur_1893 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 5041034 10366547 Psed_4703 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004334703.1 5040570 D 675635 CDS YP_004334704.1 331698465 10366548 complement(5041096..5041677) 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: nda:Ndas_0741 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 5041677 10366548 Psed_4704 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004334704.1 5041096 R 675635 CDS YP_004334705.1 331698466 10366549 complement(5041689..5042747) 1 NC_015312.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: sen:SACE_5989 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase 5042747 10366549 Psed_4705 Pseudonocardia dioxanivorans CB1190 methionine aminopeptidase YP_004334705.1 5041689 R 675635 CDS YP_004334706.1 331698467 10366550 complement(5042864..5043265) 1 NC_015312.1 KEGG: bcv:Bcav_2730 transmembrane protein; transmembrane protein 5043265 10366550 Psed_4706 Pseudonocardia dioxanivorans CB1190 transmembrane protein YP_004334706.1 5042864 R 675635 CDS YP_004334707.1 331698468 10366551 complement(5043330..5045195) 1 NC_015312.1 PFAM: Penicillin-binding protein, transpeptidase; NTF2-like N-terminal transpeptidase; KEGG: amd:AMED_2045 penicillin-binding protein, transpeptidase; penicillin-binding protein transpeptidase 5045195 10366551 Psed_4707 Pseudonocardia dioxanivorans CB1190 penicillin-binding protein transpeptidase YP_004334707.1 5043330 R 675635 CDS YP_004334708.1 331698469 10366552 complement(5045278..5046111) 1 NC_015312.1 KEGG: ami:Amir_5887 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; GCN5-like N-acetyltransferase 5046111 10366552 Psed_4708 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004334708.1 5045278 R 675635 CDS YP_004334709.1 331698470 10366553 complement(5046210..5047352) 1 NC_015312.1 TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: sen:SACE_5992 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 5047352 10366553 Psed_4709 Pseudonocardia dioxanivorans CB1190 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_004334709.1 5046210 R 675635 CDS YP_004334710.1 331698471 10366554 complement(5047461..5047952) 1 NC_015312.1 KEGG: fri:FraEuI1c_2951 hypothetical protein; hypothetical protein 5047952 10366554 Psed_4710 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334710.1 5047461 R 675635 CDS YP_004334711.1 331698472 10366555 complement(5047955..5049151) 1 NC_015312.1 PFAM: Peptidase M50; PDZ/DHR/GLGF; KEGG: ami:Amir_5889 peptidase M50; peptidase M50 5049151 10366555 Psed_4711 Pseudonocardia dioxanivorans CB1190 peptidase M50 YP_004334711.1 5047955 R 675635 CDS YP_004334712.1 331698473 10366556 complement(5049155..5050375) 1 NC_015312.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: ami:Amir_5890 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5050375 10366556 Psed_4712 Pseudonocardia dioxanivorans CB1190 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004334712.1 5049155 R 675635 CDS YP_004334713.1 331698474 10366557 5050464..5050724 1 NC_015312.1 KEGG: amd:AMED_2035 hypothetical protein; hypothetical protein 5050724 10366557 Psed_4713 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334713.1 5050464 D 675635 CDS YP_004334714.1 331698475 10366558 5050741..5051712 1 NC_015312.1 KEGG: rop:ROP_52850 hypothetical protein; manually curated; PFAM: DNA primase, small subunit; DNA primase small subunit 5051712 10366558 Psed_4714 Pseudonocardia dioxanivorans CB1190 DNA primase small subunit YP_004334714.1 5050741 D 675635 CDS YP_004334715.1 331698476 10366559 complement(5051764..5052402) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: gob:Gobs_1595 hypothetical protein; hypothetical protein 5052402 10366559 Psed_4715 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334715.1 5051764 R 675635 CDS YP_004334716.1 331698477 10366560 5052467..5052904 1 NC_015312.1 KEGG: kfl:Kfla_5255 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 5052904 10366560 Psed_4716 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004334716.1 5052467 D 675635 CDS YP_004334717.1 331698478 10366561 complement(5052895..5053482) 1 NC_015312.1 PFAM: Uracil-DNA glycosylase-like; KEGG: tcu:Tcur_1752 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase 5053482 10366561 Psed_4717 Pseudonocardia dioxanivorans CB1190 uracil-DNA glycosylase YP_004334717.1 5052895 R 675635 CDS YP_004334718.1 331698479 10366562 5053537..5054607 1 NC_015312.1 PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: mpa:MAP0341 ATP-dependent DNA ligase; ATP dependent DNA ligase 5054607 10366562 Psed_4718 Pseudonocardia dioxanivorans CB1190 ATP dependent DNA ligase YP_004334718.1 5053537 D 675635 CDS YP_004334719.1 331698480 10366563 complement(5054611..5055717) 1 NC_015312.1 TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: gbr:Gbro_2114 radical SAM enzyme, Cfr family; PFAM: Radical SAM; ribosomal RNA large subunit methyltransferase N 5055717 10366563 Psed_4719 Pseudonocardia dioxanivorans CB1190 ribosomal RNA large subunit methyltransferase N YP_004334719.1 5054611 R 675635 CDS YP_004334720.1 331698481 10366564 complement(5055745..5056227) 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: bcv:Bcav_4163 pyridoxamine 5'-phosphate oxidase-related protein FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 5056227 10366564 Psed_4720 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004334720.1 5055745 R 675635 CDS YP_004334721.1 331698482 10366565 5056331..5057107 1 NC_015312.1 KEGG: vcn:VOLCADRAFT_33984 hypothetical protein; hypothetical protein 5057107 10366565 Psed_4721 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334721.1 5056331 D 675635 CDS YP_004334722.1 331698483 10366566 complement(5057670..5058710) 1 NC_015312.1 KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA; hypothetical protein 5058710 10366566 Psed_4722 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334722.1 5057670 R 675635 CDS YP_004334723.1 331698484 10366567 5058868..5059359 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tcu:Tcur_2193 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 5059359 10366567 Psed_4723 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004334723.1 5058868 D 675635 CDS YP_004334724.1 331698485 10366568 complement(5059431..5060195) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: ami:Amir_5905 methyltransferase type 11; type 11 methyltransferase 5060195 10366568 Psed_4724 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004334724.1 5059431 R 675635 CDS YP_004334725.1 331698486 10366569 complement(5060199..5061062) 1 NC_015312.1 PFAM: Phosphatidate cytidylyltransferase; KEGG: svi:Svir_09930 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 5061062 10366569 Psed_4725 Pseudonocardia dioxanivorans CB1190 phosphatidate cytidylyltransferase YP_004334725.1 5060199 R 675635 CDS YP_004334726.1 331698487 10366570 complement(5061165..5061722) 1 NC_015312.1 TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: svi:Svir_09920 ribosome recycling factor; PFAM: Ribosome recycling factor; ribosome-recycling factor 5061722 10366570 Psed_4726 Pseudonocardia dioxanivorans CB1190 ribosome-recycling factor YP_004334726.1 5061165 R 675635 CDS YP_004334727.1 331698488 10366571 complement(5061758..5062516) 1 NC_015312.1 KEGG: ami:Amir_5909 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase 5062516 10366571 Psed_4727 Pseudonocardia dioxanivorans CB1190 uridylate kinase YP_004334727.1 5061758 R 675635 CDS YP_004334728.1 331698489 10366572 complement(5062533..5063360) 1 NC_015312.1 TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Translation elongation factor EFTs/EF1B; KEGG: gbr:Gbro_2105 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; elongation factor Ts 5063360 10366572 Psed_4728 Pseudonocardia dioxanivorans CB1190 elongation factor Ts YP_004334728.1 5062533 R 675635 CDS YP_004334729.1 331698490 10366573 complement(5063461..5064363) 1 NC_015312.1 KEGG: ami:Amir_5911 ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 5064363 10366573 Psed_4729 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S2 YP_004334729.1 5063461 R 675635 CDS YP_004334730.1 331698491 10366574 5064743..5065480 1 NC_015312.1 PFAM: Peptidase M23; KEGG: nfa:nfa41330 peptidase; peptidase M23 5065480 10366574 Psed_4730 Pseudonocardia dioxanivorans CB1190 peptidase M23 YP_004334730.1 5064743 D 675635 CDS YP_004334731.1 331698492 10366575 complement(5065488..5066777) 1 NC_015312.1 KEGG: svi:Svir_09870 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; RNA polymerase sigma 28 subunit FliA/WhiG 5066777 10366575 Psed_4731 Pseudonocardia dioxanivorans CB1190 RNA polymerase sigma 28 subunit FliA/WhiG YP_004334731.1 5065488 R 675635 CDS YP_004334732.1 331698493 10366576 complement(5066752..5067684) 1 NC_015312.1 KEGG: mjl:Mjls_1970 site-specific tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC 5067684 10366576 Psed_4732 Pseudonocardia dioxanivorans CB1190 tyrosine recombinase xerC YP_004334732.1 5066752 R 675635 CDS YP_004334733.1 331698494 10366577 complement(5067963..5069153) 1 NC_015312.1 KEGG: mtu:Rv2896c hypothetical protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 5069153 10366577 Psed_4733 Pseudonocardia dioxanivorans CB1190 DNA protecting protein DprA YP_004334733.1 5067963 R 675635 CDS YP_004334734.1 331698495 10366578 complement(5069663..5071174) 1 NC_015312.1 TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: req:REQ_18110 magnesium chelatase; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI 5071174 10366578 Psed_4734 Pseudonocardia dioxanivorans CB1190 Mg chelatase subunit ChlI YP_004334734.1 5069663 R 675635 CDS YP_004334735.1 331698496 10366579 complement(5071174..5071530) 1 NC_015312.1 TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: svi:Svir_09830 conserved hypothetical protein TIGR00252; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 5071530 10366579 Psed_4735 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334735.1 5071174 R 675635 CDS YP_004334736.1 331698497 10366580 complement(5071695..5072018) 1 NC_015312.1 PFAM: Protein of unknown function DUF2469; KEGG: ami:Amir_5918 hypothetical protein; hypothetical protein 5072018 10366580 Psed_4736 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334736.1 5071695 R 675635 CDS YP_004334737.1 331698498 10366581 complement(5072015..5072812) 1 NC_015312.1 KEGG: ami:Amir_5919 ribonuclease H; PFAM: Ribonuclease HII/HIII; Ribonuclease H 5072812 10366581 Psed_4737 Pseudonocardia dioxanivorans CB1190 Ribonuclease H YP_004334737.1 5072015 R 675635 CDS YP_004334738.1 331698499 10366582 complement(5072815..5074107) 1 NC_015312.1 TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: amd:AMED_5515 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 5074107 10366582 Psed_4738 Pseudonocardia dioxanivorans CB1190 signal peptidase I YP_004334738.1 5072815 R 675635 CDS YP_004334739.1 331698500 10366583 complement(5074445..5074804) 1 NC_015312.1 TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: sen:SACE_6049 50S ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 5074804 10366583 Psed_4739 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L19 YP_004334739.1 5074445 R 675635 CDS YP_004334740.1 331698501 10366584 complement(5074955..5075740) 1 NC_015312.1 PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: amd:AMED_1962 tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 5075740 10366584 Psed_4740 Pseudonocardia dioxanivorans CB1190 tRNA (guanine-N(1)-)-methyltransferase YP_004334740.1 5074955 R 675635 CDS YP_004334741.1 331698502 10366585 5075786..5076505 1 NC_015312.1 PFAM: MgtC/SapB transporter; KEGG: sen:SACE_3790 Mg2+ transporter-C (MgtC) family protein; MgtC/SapB transporter 5076505 10366585 Psed_4741 Pseudonocardia dioxanivorans CB1190 MgtC/SapB transporter YP_004334741.1 5075786 D 675635 CDS YP_004334742.1 331698503 10366586 complement(5076519..5077088) 1 NC_015312.1 PFAM: Clp, N-terminal; KEGG: cai:Caci_7209 Clp domain protein; Clp domain-containing protein 5077088 10366586 Psed_4742 Pseudonocardia dioxanivorans CB1190 Clp domain-containing protein YP_004334742.1 5076519 R 675635 CDS YP_004334743.1 331698504 10366587 complement(5077101..5077316) 1 NC_015312.1 KEGG: nfa:nfa51500 hypothetical protein; hypothetical protein 5077316 10366587 Psed_4743 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334743.1 5077101 R 675635 CDS YP_004334744.1 331698505 10366588 complement(5077443..5078093) 1 NC_015312.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: svi:Svir_09770 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; ribosome maturation factor rimM 5078093 10366588 Psed_4744 Pseudonocardia dioxanivorans CB1190 ribosome maturation factor rimM YP_004334744.1 5077443 R 675635 CDS YP_004334745.1 331698506 10366589 complement(5078050..5078289) 1 NC_015312.1 HAMAP: Uncharacterised protein family UPF0109, bacterial; KEGG: ami:Amir_5925 hypothetical protein; hypothetical protein 5078289 10366589 Psed_4745 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334745.1 5078050 R 675635 CDS YP_004334746.1 331698507 10366590 complement(5078286..5078729) 1 NC_015312.1 TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: amd:AMED_1958 small subunit ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 5078729 10366590 Psed_4746 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S16 YP_004334746.1 5078286 R 675635 CDS YP_004334747.1 331698508 10366591 complement(5078912..5080087) 1 NC_015312.1 PFAM: Abortive infection protein; KEGG: mbt:JTY_0677 integral membrane protein; abortive infection protein 5080087 10366591 Psed_4747 Pseudonocardia dioxanivorans CB1190 abortive infection protein YP_004334747.1 5078912 R 675635 CDS YP_004334748.1 331698509 10366592 complement(5080468..5081568) 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: ami:Amir_5929 amidohydrolase; amidohydrolase 5081568 10366592 Psed_4748 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004334748.1 5080468 R 675635 CDS YP_004334749.1 331698510 10366593 complement(5081565..5083094) 1 NC_015312.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: svi:Svir_09710 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; signal recognition particle protein 5083094 10366593 Psed_4749 Pseudonocardia dioxanivorans CB1190 signal recognition particle protein YP_004334749.1 5081565 R 675635 CDS YP_004334750.1 331698511 10366594 complement(5083105..5083464) 1 NC_015312.1 hypothetical protein 5083464 10366594 Psed_4750 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334750.1 5083105 R 675635 CDS YP_004334751.1 331698512 10366595 complement(5083467..5083805) 1 NC_015312.1 KEGG: mmi:MMAR_1788 nitrogen regulatory protein P-II GlnB; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 5083805 10366595 Psed_4751 Pseudonocardia dioxanivorans CB1190 nitrogen regulatory protein P-II YP_004334751.1 5083467 R 675635 CDS YP_004334752.1 331698513 10366596 complement(5083802..5086207) 1 NC_015312.1 SMART: Metal-dependent phosphohydrolase, HD domain; TIGRFAM: Protein-PII uridylyltransferase; KEGG: ami:Amir_5932 PII uridylyl-transferase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Amino acid-binding ACT; UTP-GlnB uridylyltransferase, GlnD 5086207 10366596 Psed_4752 Pseudonocardia dioxanivorans CB1190 UTP-GlnB uridylyltransferase, GlnD YP_004334752.1 5083802 R 675635 CDS YP_004334753.1 331698514 10366597 complement(5086245..5086628) 1 NC_015312.1 KEGG: mav:MAV_3774 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 5086628 10366597 Psed_4753 Pseudonocardia dioxanivorans CB1190 nitrogen regulatory protein P-II YP_004334753.1 5086245 R 675635 CDS YP_004334754.1 331698515 10366598 complement(5086709..5087047) 1 NC_015312.1 KEGG: gbr:Gbro_2079 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 5087047 10366598 Psed_4754 Pseudonocardia dioxanivorans CB1190 nitrogen regulatory protein P-II YP_004334754.1 5086709 R 675635 CDS YP_004334755.1 331698516 10366599 complement(5087050..5088426) 1 NC_015312.1 KEGG: rha:RHA1_ro06530 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter; ammonium transporter 5088426 10366599 Psed_4755 Pseudonocardia dioxanivorans CB1190 ammonium transporter YP_004334755.1 5087050 R 675635 CDS YP_004334756.1 331698517 10366600 complement(5088940..5090763) 1 NC_015312.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: svi:Svir_09610 signal recognition particle-docking protein FtsY; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY 5090763 10366600 Psed_4756 Pseudonocardia dioxanivorans CB1190 signal recognition particle-docking protein FtsY YP_004334756.1 5088940 R 675635 CDS YP_004334757.1 331698518 10366601 complement(5090793..5094353) 1 NC_015312.1 TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SMCs flexible hinge; KEGG: svi:Svir_09570 condensin subunit Smc; SMART: SMCs flexible hinge; chromosome segregation protein SMC 5094353 10366601 Psed_4757 Pseudonocardia dioxanivorans CB1190 chromosome segregation protein SMC YP_004334757.1 5090793 R 675635 CDS YP_004334758.1 331698519 10366602 complement(5094396..5094686) 1 NC_015312.1 manually curated; HAMAP: Acylphosphatase; KEGG: sro:Sros_7993 acylphosphatase-like protein; PFAM: Acylphosphatase-like; acylphosphatase 5094686 10366602 Psed_4758 Pseudonocardia dioxanivorans CB1190 acylphosphatase YP_004334758.1 5094396 R 675635 CDS YP_004334759.1 331698520 10366603 5094709..5095440 1 NC_015312.1 KEGG: ami:Amir_5005 SCP-like extracellular; manually curated; PFAM: CAP domain; hypothetical protein 5095440 10366603 Psed_4759 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334759.1 5094709 D 675635 CDS YP_004334760.1 331698521 10366604 complement(5095489..5096187) 1 NC_015312.1 KEGG: ami:Amir_5960 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5096187 10366604 Psed_4760 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004334760.1 5095489 R 675635 CDS YP_004334761.1 331698522 10366605 5096394..5097425 1 NC_015312.1 KEGG: cmi:CMM_1697 Mg2+/Co2+ transporter; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 5097425 10366605 Psed_4761 Pseudonocardia dioxanivorans CB1190 magnesium and cobalt transport protein CorA YP_004334761.1 5096394 D 675635 CDS YP_004334762.1 331698523 10366606 complement(5097436..5098332) 1 NC_015312.1 KEGG: amd:AMED_1798 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; SMART: DNA glycosylase/AP lyase, catalytic domain; formamidopyrimidine-DNA glycosylase 5098332 10366606 Psed_4762 Pseudonocardia dioxanivorans CB1190 formamidopyrimidine-DNA glycosylase YP_004334762.1 5097436 R 675635 CDS YP_004334763.1 331698524 10366607 complement(5098343..5099059) 1 NC_015312.1 KEGG: ami:Amir_5964 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA-binding; ribonuclease 3 5099059 10366607 Psed_4763 Pseudonocardia dioxanivorans CB1190 ribonuclease 3 YP_004334763.1 5098343 R 675635 CDS YP_004334764.1 331698525 10366608 complement(5099097..5099279) 1 NC_015312.1 TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: ami:Amir_5965 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 5099279 10366608 Psed_4764 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L32 YP_004334764.1 5099097 R 675635 CDS YP_004334765.1 331698526 10366609 complement(5099343..5099921) 1 NC_015312.1 PFAM: Protein of unknown function DUF177; KEGG: amd:AMED_1794 hypothetical protein; hypothetical protein 5099921 10366609 Psed_4765 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334765.1 5099343 R 675635 CDS YP_004334766.1 331698527 10366610 complement(5100002..5100766) 1 NC_015312.1 KEGG: sen:SACE_6104 large Ala/Glu-rich protein; large Ala/Glu-rich protein 5100766 10366610 Psed_4766 Pseudonocardia dioxanivorans CB1190 large Ala/Glu-rich protein YP_004334766.1 5100002 R 675635 CDS YP_004334767.1 331698528 10366611 complement(5100882..5101364) 1 NC_015312.1 PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: svi:Svir_09450 phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase 5101364 10366611 Psed_4767 Pseudonocardia dioxanivorans CB1190 phosphopantetheine adenylyltransferase YP_004334767.1 5100882 R 675635 CDS YP_004334768.1 331698529 10366612 complement(5101387..5101950) 1 NC_015312.1 KEGG: amd:AMED_1788 methyltransferase; TIGRFAM: RNA methyltransferase, RsmD; PFAM: RNA methyltransferase, RsmD; methyltransferase 5101950 10366612 Psed_4768 Pseudonocardia dioxanivorans CB1190 methyltransferase YP_004334768.1 5101387 R 675635 CDS YP_004334769.1 331698530 10366613 complement(5101958..5105335) 1 NC_015312.1 SMART: Biotin carboxylase, C-terminal; TIGRFAM: Pyruvate carboxylase; KEGG: sco:SCO0546 pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Carboxylase, conserved domain; Biotin/lipoyl attachment; pyruvate carboxylase 5105335 10366613 Psed_4769 Pseudonocardia dioxanivorans CB1190 pyruvate carboxylase YP_004334769.1 5101958 R 675635 CDS YP_004334770.1 331698531 10366614 5105704..5106510 1 NC_015312.1 KEGG: gbr:Gbro_2781 hypothetical protein; hypothetical protein 5106510 10366614 Psed_4770 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334770.1 5105704 D 675635 CDS YP_004334771.1 331698532 10366615 complement(5106529..5108775) 1 NC_015312.1 TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; KEGG: sen:SACE_6119 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; ATP-dependent DNA helicase RecG 5108775 10366615 Psed_4771 Pseudonocardia dioxanivorans CB1190 ATP-dependent DNA helicase RecG YP_004334771.1 5106529 R 675635 CDS YP_004334772.1 331698533 10366616 complement(5108813..5110471) 1 NC_015312.1 KEGG: ami:Amir_5978 Dak phosphatase; TIGRFAM: DAK2 domain-containing protein YloV; PFAM: Dak phosphatase; DAK2 domain fusion protein YloV 5110471 10366616 Psed_4772 Pseudonocardia dioxanivorans CB1190 DAK2 domain fusion protein YloV YP_004334772.1 5108813 R 675635 CDS YP_004334773.1 331698534 10366617 5110611..5110802 1 NC_015312.1 TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: nfa:nfa41960 50S ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 5110802 10366617 Psed_4773 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L28 YP_004334773.1 5110611 D 675635 CDS YP_004334774.1 331698535 10366618 complement(5111011..5111691) 1 NC_015312.1 TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: tcu:Tcur_3819 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; uracil-DNA glycosylase 5111691 10366618 Psed_4774 Pseudonocardia dioxanivorans CB1190 uracil-DNA glycosylase YP_004334774.1 5111011 R 675635 CDS YP_004334775.1 331698536 10366619 complement(5111691..5112215) 1 NC_015312.1 KEGG: srt:Srot_0993 transferase; transferase 5112215 10366619 Psed_4775 Pseudonocardia dioxanivorans CB1190 transferase YP_004334775.1 5111691 R 675635 CDS YP_004334776.1 331698537 10366620 complement(5112225..5112602) 1 NC_015312.1 KEGG: sen:SACE_6539 multisubunit Na+:H+ antiporter MnhG subunit; TIGRFAM: Na+/H+ antiporter subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 5112602 10366620 Psed_4776 Pseudonocardia dioxanivorans CB1190 monovalent cation/proton antiporter subunit MnhG/PhaG YP_004334776.1 5112225 R 675635 CDS YP_004334777.1 331698538 10366621 complement(5112599..5112865) 1 NC_015312.1 KEGG: fre:Franean1_5210 hypothetical protein; hypothetical protein 5112865 10366621 Psed_4777 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334777.1 5112599 R 675635 CDS YP_004334778.1 331698539 10366622 complement(5112862..5113410) 1 NC_015312.1 KEGG: sen:SACE_6541 cation antiporter; cation antiporter 5113410 10366622 Psed_4778 Pseudonocardia dioxanivorans CB1190 cation antiporter YP_004334778.1 5112862 R 675635 CDS YP_004334779.1 331698540 10366623 complement(5113484..5115010) 1 NC_015312.1 KEGG: sen:SACE_6542 monovalent cation/H+ antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 5115010 10366623 Psed_4779 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004334779.1 5113484 R 675635 CDS YP_004334780.1 331698541 10366624 complement(5115013..5115483) 1 NC_015312.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; KEGG: svi:Svir_14760 multisubunit Na+/H+ antiporter, MnhC subunit; NADH-ubiquinone oxidoreductase subunit 4L 5115483 10366624 Psed_4780 Pseudonocardia dioxanivorans CB1190 NADH-ubiquinone oxidoreductase subunit 4L YP_004334780.1 5115013 R 675635 CDS YP_004334781.1 331698542 10366626 complement(5118634..5120835) 1 NC_015312.1 KEGG: dvm:DvMF_2183 malate synthase G; PFAM: Malate synthase; malate synthase 5120835 10366626 Psed_4782 Pseudonocardia dioxanivorans CB1190 malate synthase YP_004334781.1 5118634 R 675635 CDS YP_004334782.1 331698543 10366627 5121105..5122559 1 NC_015312.1 KEGG: svi:Svir_02320 FAD/FMN-dependent dehydrogenase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 5122559 10366627 Psed_4783 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase YP_004334782.1 5121105 D 675635 CDS YP_004334783.1 331698544 10366628 5122604..5123770 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: svi:Svir_02310 FAD/FMN-dependent dehydrogenase; FAD linked oxidase domain-containing protein 5123770 10366628 Psed_4784 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004334783.1 5122604 D 675635 CDS YP_004334784.1 331698545 10366629 5123767..5125146 1 NC_015312.1 PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: svi:Svir_02300 Fe-S oxidoreductase; hypothetical protein 5125146 10366629 Psed_4785 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334784.1 5123767 D 675635 CDS YP_004334785.1 331698546 10366630 5125348..5125959 1 NC_015312.1 KEGG: rha:RHA1_ro06730 hypothetical protein; hypothetical protein 5125959 10366630 Psed_4786 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334785.1 5125348 D 675635 CDS YP_004334786.1 331698547 10366631 5126001..5126699 1 NC_015312.1 KEGG: sen:SACE_3778 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 5126699 10366631 Psed_4787 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334786.1 5126001 D 675635 CDS YP_004334787.1 331698548 10366632 5126857..5128308 1 NC_015312.1 KEGG: svi:Svir_02320 FAD/FMN-dependent dehydrogenase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 5128308 10366632 Psed_4788 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase YP_004334787.1 5126857 D 675635 CDS YP_004334788.1 331698549 10366633 5128312..5129490 1 NC_015312.1 PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: svi:Svir_02310 FAD/FMN-dependent dehydrogenase; FAD linked oxidase domain-containing protein 5129490 10366633 Psed_4789 Pseudonocardia dioxanivorans CB1190 FAD linked oxidase domain-containing protein YP_004334788.1 5128312 D 675635 CDS YP_004334789.1 331698550 10366634 5129487..5130776 1 NC_015312.1 PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: svi:Svir_02300 Fe-S oxidoreductase; hypothetical protein 5130776 10366634 Psed_4790 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334789.1 5129487 D 675635 CDS YP_004334790.1 331698551 10366635 complement(5130813..5131799) 1 NC_015312.1 TIGRFAM: Thiamine-monophosphate kinase; KEGG: ami:Amir_5985 thiamine-monophosphate kinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; thiamine-monophosphate kinase 5131799 10366635 Psed_4791 Pseudonocardia dioxanivorans CB1190 thiamine-monophosphate kinase YP_004334790.1 5130813 R 675635 CDS YP_004334791.1 331698552 10366636 5131912..5132148 1 NC_015312.1 PFAM: Transcription regulator AsnC-type, C-terminal; KEGG: nml:Namu_1487 AsnC family transcriptional regulator; AsnC family transcriptional regulator 5132148 10366636 Psed_4792 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004334791.1 5131912 D 675635 CDS YP_004334792.1 331698553 10366637 5132154..5132729 1 NC_015312.1 KEGG: nfa:nfa42020 hypothetical protein; hypothetical protein 5132729 10366637 Psed_4793 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334792.1 5132154 D 675635 CDS YP_004334793.1 331698554 10366638 complement(5132747..5133844) 1 NC_015312.1 PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: req:REQ_31280 D-alanine-D-alanine ligase; D-alanine--D-alanine ligase 5133844 10366638 Psed_4794 Pseudonocardia dioxanivorans CB1190 D-alanine--D-alanine ligase YP_004334793.1 5132747 R 675635 CDS YP_004334794.1 331698555 10366639 complement(5133862..5135778) 1 NC_015312.1 KEGG: bxe:Bxe_A2769 acetyl-CoA synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; acetate--CoA ligase 5135778 10366639 Psed_4795 Pseudonocardia dioxanivorans CB1190 acetate--CoA ligase YP_004334794.1 5133862 R 675635 CDS YP_004334795.1 331698556 10366640 complement(5135796..5136935) 1 NC_015312.1 KEGG: bts:Btus_1727 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; isovaleryl-CoA dehydrogenase 5136935 10366640 Psed_4796 Pseudonocardia dioxanivorans CB1190 isovaleryl-CoA dehydrogenase YP_004334795.1 5135796 R 675635 CDS YP_004334796.1 331698557 10366641 5137184..5137786 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: gbr:Gbro_2858 isochorismatase hydrolase; isochorismatase hydrolase 5137786 10366641 Psed_4797 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004334796.1 5137184 D 675635 CDS YP_004334797.1 331698558 10366642 5137827..5138567 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: gob:Gobs_4542 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 5138567 10366642 Psed_4798 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004334797.1 5137827 D 675635 CDS YP_004334798.1 331698559 10366643 5138604..5140733 1 NC_015312.1 KEGG: sen:SACE_1333 prolyl oligopeptidase; prolyl oligopeptidase 5140733 10366643 Psed_4799 Pseudonocardia dioxanivorans CB1190 prolyl oligopeptidase YP_004334798.1 5138604 D 675635 CDS YP_004334799.1 331698560 10366644 5140730..5141758 1 NC_015312.1 PFAM: Mechanosensitive ion channel MscS; KEGG: sen:SACE_1332 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 5141758 10366644 Psed_4800 Pseudonocardia dioxanivorans CB1190 mechanosensitive ion channel MscS YP_004334799.1 5140730 D 675635 CDS YP_004334800.1 331698561 10366645 5141820..5142200 1 NC_015312.1 PFAM: Globin, truncated bacterial-like; KEGG: amd:AMED_6822 oxygen-binding heme protein; globin 5142200 10366645 Psed_4801 Pseudonocardia dioxanivorans CB1190 globin YP_004334800.1 5141820 D 675635 CDS YP_004334801.1 331698562 10366646 5142269..5143828 1 NC_015312.1 KEGG: ami:Amir_1134 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; alpha amylase 5143828 10366646 Psed_4802 Pseudonocardia dioxanivorans CB1190 alpha amylase YP_004334801.1 5142269 D 675635 CDS YP_004334802.1 331698563 10366647 complement(5143957..5144622) 1 NC_015312.1 KEGG: ami:Amir_1133 hypothetical protein; hypothetical protein 5144622 10366647 Psed_4803 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334802.1 5143957 R 675635 CDS YP_004334803.1 331698564 10366648 complement(5144696..5145115) 1 NC_015312.1 PFAM: Thioesterase superfamily; KEGG: sna:Snas_4640 thioesterase superfamily protein; thioesterase 5145115 10366648 Psed_4804 Pseudonocardia dioxanivorans CB1190 thioesterase YP_004334803.1 5144696 R 675635 CDS YP_004334804.1 331698565 10366649 complement(5145159..5150018) 1 NC_015312.1 PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: sen:SACE_1325 NAD-specific glutamate dehydrogenase; NAD-glutamate dehydrogenase 5150018 10366649 Psed_4805 Pseudonocardia dioxanivorans CB1190 NAD-glutamate dehydrogenase YP_004334804.1 5145159 R 675635 CDS YP_004334805.1 331698566 10366650 complement(5150091..5153828) 1 NC_015312.1 KEGG: tpr:Tpau_0881 hypothetical protein; hypothetical protein 5153828 10366650 Psed_4806 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334805.1 5150091 R 675635 CDS YP_004334806.1 331698567 10366651 complement(5153911..5155587) 1 NC_015312.1 TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter-like; KEGG: mav:MAV_1695 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; ChvD family ATP-binding cassette protein 5155587 10366651 Psed_4807 Pseudonocardia dioxanivorans CB1190 ChvD family ATP-binding cassette protein YP_004334806.1 5153911 R 675635 CDS YP_004334807.1 331698568 10366652 complement(5155679..5156236) 1 NC_015312.1 KEGG: req:REQ_30370 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 5156236 10366652 Psed_4808 Pseudonocardia dioxanivorans CB1190 single-strand binding protein YP_004334807.1 5155679 R 675635 CDS YP_004334808.1 331698569 10366656 complement(5162309..5164489) 1 NC_015312.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; Copper resistance D; KEGG: sen:SACE_1321 copper resistance transporter; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein 5164489 10366656 Psed_4809 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase caa3-type, assembly factor CtaG-like protein YP_004334808.1 5162309 R 675635 CDS YP_004334809.1 331698570 10366657 complement(5164524..5165348) 1 NC_015312.1 KEGG: sro:Sros_0115 phosphoprotein phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase 5165348 10366657 Psed_4810 Pseudonocardia dioxanivorans CB1190 Ser/Thr phosphatase YP_004334809.1 5164524 R 675635 CDS YP_004334810.1 331698571 10366658 5165415..5167172 1 NC_015312.1 PFAM: DNA methylase, adenine-specific; KEGG: sen:SACE_6614 type I restriction system adenine methylase; N-6 DNA methylase 5167172 10366658 Psed_4811 Pseudonocardia dioxanivorans CB1190 N-6 DNA methylase YP_004334810.1 5165415 D 675635 CDS YP_004334811.1 331698572 10366660 5167317..5168837 1 NC_015312.1 KEGG: sna:Snas_6234 regulatory protein GntR HTH; PFAM: Integrase, catalytic core, phage; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; integrase protein 5168837 10366660 Psed_4812 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004334811.1 5167317 D 675635 CDS YP_004334812.1 331698573 10366661 5169107..5170699 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 5170699 10366661 Psed_4813 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004334812.1 5169107 D 675635 CDS YP_004334813.1 331698574 10366662 5170696..5171508 1 NC_015312.1 KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 5171508 10366662 Psed_4814 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004334813.1 5170696 D 675635 CDS YP_004334814.1 331698575 10366663 complement(5172449..5172736) 1 NC_015312.1 hypothetical protein 5172736 10366663 Psed_4815 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334814.1 5172449 R 675635 CDS YP_004334815.1 331698576 10366664 5172958..5173911 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: cai:Caci_5722 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 5173911 10366664 Psed_4816 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004334815.1 5172958 D 675635 CDS YP_004334816.1 331698577 10366665 5173908..5174723 1 NC_015312.1 KEGG: amd:AMED_6504 ABC transport system permease; ABC transporter permease 5174723 10366665 Psed_4817 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004334816.1 5173908 D 675635 CDS YP_004334817.1 331698578 10366666 5174922..5175737 1 NC_015312.1 PFAM: Protein of unknown function DUF347; KEGG: cai:Caci_8898 protein of unknown function DUF347; hypothetical protein 5175737 10366666 Psed_4818 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334817.1 5174922 D 675635 CDS YP_004334818.1 331698579 10366667 complement(5175889..5176905) 1 NC_015312.1 KEGG: sen:SACE_4320 integral membrane protein; hypothetical protein 5176905 10366667 Psed_4819 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334818.1 5175889 R 675635 CDS YP_004334819.1 331698580 10366668 complement(5176905..5178083) 1 NC_015312.1 KEGG: nca:Noca_1551 hypothetical protein; hypothetical protein 5178083 10366668 Psed_4820 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334819.1 5176905 R 675635 CDS YP_004334820.1 331698581 10366669 complement(5178165..5178617) 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: fal:FRAAL2404 hypothetical protein; hypothetical protein 5178617 10366669 Psed_4821 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334820.1 5178165 R 675635 CDS YP_004334821.1 331698582 10366670 complement(5178639..5180051) 1 NC_015312.1 KEGG: sma:SAV_4158 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 5180051 10366670 Psed_4822 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004334821.1 5178639 R 675635 CDS YP_004334822.1 331698583 10366671 complement(5180048..5180773) 1 NC_015312.1 KEGG: tfu:Tfu_0343 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5180773 10366671 Psed_4823 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004334822.1 5180048 R 675635 CDS YP_004334823.1 331698584 10366672 5180979..5181617 1 NC_015312.1 PFAM: SNARE associated Golgi protein; KEGG: amd:AMED_6495 DedA-like membrane protein; hypothetical protein 5181617 10366672 Psed_4824 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334823.1 5180979 D 675635 CDS YP_004334824.1 331698585 10366673 5182031..5183086 1 NC_015312.1 KEGG: afo:Afer_0701 hypothetical protein; hypothetical protein 5183086 10366673 Psed_4825 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334824.1 5182031 D 675635 CDS YP_004334825.1 331698586 10366674 5183083..5183874 1 NC_015312.1 KEGG: nml:Namu_1164 PA-phosphatase-like phosphoesterase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 5183874 10366674 Psed_4826 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004334825.1 5183083 D 675635 CDS YP_004334826.1 331698587 10366675 5183871..5185208 1 NC_015312.1 KEGG: tgr:Tgr7_2376 hypothetical protein; hypothetical protein 5185208 10366675 Psed_4827 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334826.1 5183871 D 675635 CDS YP_004334827.1 331698588 10366676 complement(5185321..5185446) 1 NC_015312.1 hypothetical protein 5185446 10366676 Psed_4828 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334827.1 5185321 R 675635 CDS YP_004334828.1 331698589 10366677 complement(5185609..5186940) 1 NC_015312.1 KEGG: gob:Gobs_0770 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 5186940 10366677 Psed_4829 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004334828.1 5185609 R 675635 CDS YP_004334829.1 331698590 10366678 complement(5186940..5187626) 1 NC_015312.1 KEGG: amd:AMED_6941 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5187626 10366678 Psed_4830 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004334829.1 5186940 R 675635 CDS YP_004334830.1 331698591 10366679 complement(5188186..5189538) 1 NC_015312.1 KEGG: fri:FraEuI1c_2985 Dyp-type peroxidase; TIGRFAM: Tat-translocated enzyme; Dyp-type peroxidase; PFAM: Dyp-type peroxidase; Tat-translocated protein 5189538 10366679 Psed_4831 Pseudonocardia dioxanivorans CB1190 Tat-translocated protein YP_004334830.1 5188186 R 675635 CDS YP_004334831.1 331698592 10366680 complement(5189535..5190704) 1 NC_015312.1 PFAM: Peptidase M75, Imelysin; KEGG: fri:FraEuI1c_2986 peptidase M75, imelysin; peptidase M75, Imelysin 5190704 10366680 Psed_4832 Pseudonocardia dioxanivorans CB1190 peptidase M75, Imelysin YP_004334831.1 5189535 R 675635 CDS YP_004334832.1 331698593 10366681 complement(5190755..5191615) 1 NC_015312.1 PFAM: Iron permease FTR1; KEGG: fri:FraEuI1c_2987 iron permease FTR1; iron permease 5191615 10366681 Psed_4833 Pseudonocardia dioxanivorans CB1190 iron permease YP_004334832.1 5190755 R 675635 CDS YP_004334833.1 331698594 10366682 5191815..5192222 1 NC_015312.1 PFAM: Penicillinase repressor; KEGG: fre:Franean1_7010 CopY family transcriptional regulator; penicillinase repressor 5192222 10366682 Psed_4834 Pseudonocardia dioxanivorans CB1190 penicillinase repressor YP_004334833.1 5191815 D 675635 CDS YP_004334834.1 331698595 10366683 5192219..5193130 1 NC_015312.1 PFAM: Peptidase M48; KEGG: fri:FraEuI1c_2989 peptidase M48 Ste24p; peptidase M48 Ste24p 5193130 10366683 Psed_4835 Pseudonocardia dioxanivorans CB1190 peptidase M48 Ste24p YP_004334834.1 5192219 D 675635 CDS YP_004334835.1 331698596 10366684 complement(5193099..5193707) 1 NC_015312.1 KEGG: mgi:Mflv_1496 hypothetical protein; hypothetical protein 5193707 10366684 Psed_4836 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334835.1 5193099 R 675635 CDS YP_004334836.1 331698597 10366685 complement(5194158..5194616) 1 NC_015312.1 KEGG: mmi:MMAR_1549 hypothetical protein; hypothetical protein 5194616 10366685 Psed_4837 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334836.1 5194158 R 675635 CDS YP_004334837.1 331698598 10366686 complement(5194688..5195743) 1 NC_015312.1 TIGRFAM: Acetate kinase; KEGG: fal:FRAAL5741 acetate kinase A (propionate kinase 2); PFAM: Acetate/butyrate kinase; acetate kinase 5195743 10366686 Psed_4838 Pseudonocardia dioxanivorans CB1190 acetate kinase YP_004334837.1 5194688 R 675635 CDS YP_004334838.1 331698599 10366687 complement(5195787..5198141) 1 NC_015312.1 HAMAP: phosphoketolase; KEGG: mkm:Mkms_2837 phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal; phosphoketolase 5198141 10366687 Psed_4839 Pseudonocardia dioxanivorans CB1190 phosphoketolase YP_004334838.1 5195787 R 675635 CDS YP_004334839.1 331698600 10366688 complement(5198355..5199896) 1 NC_015312.1 KEGG: mau:Micau_2779 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Transport-associated; UspA; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein 5199896 10366688 Psed_4840 Pseudonocardia dioxanivorans CB1190 CBS domain-containing protein YP_004334839.1 5198355 R 675635 CDS YP_004334840.1 331698601 10366689 complement(5199893..5200762) 1 NC_015312.1 PFAM: UspA; KEGG: sen:SACE_2455 universal stress protein; UspA domain-containing protein 5200762 10366689 Psed_4841 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004334840.1 5199893 R 675635 CDS YP_004334841.1 331698602 10366690 complement(5201173..5202078) 1 NC_015312.1 PFAM: UspA; KEGG: mil:ML5_4708 UspA domain-containing protein; UspA domain-containing protein 5202078 10366690 Psed_4842 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004334841.1 5201173 R 675635 CDS YP_004334842.1 331698603 10366691 complement(5202075..5202959) 1 NC_015312.1 PFAM: UspA; KEGG: mil:ML5_4708 UspA domain-containing protein; UspA domain-containing protein 5202959 10366691 Psed_4843 Pseudonocardia dioxanivorans CB1190 UspA domain-containing protein YP_004334842.1 5202075 R 675635 CDS YP_004334843.1 331698604 10366692 5203193..5204209 1 NC_015312.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: scb:SCAB_10521 oxidoreductase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 5204209 10366692 Psed_4844 Pseudonocardia dioxanivorans CB1190 glyceraldehyde-3-phosphate dehydrogenase YP_004334843.1 5203193 D 675635 CDS YP_004334844.1 331698605 10366693 5204206..5205684 1 NC_015312.1 KEGG: sro:Sros_4837 gluconate kinase; gluconate kinase 5205684 10366693 Psed_4845 Pseudonocardia dioxanivorans CB1190 gluconate kinase YP_004334844.1 5204206 D 675635 CDS YP_004334845.1 331698606 10366695 complement(5205978..5206391) 1 NC_015312.1 KEGG: nml:Namu_2400 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein 5206391 10366695 Psed_4847 Pseudonocardia dioxanivorans CB1190 CBS domain-containing protein YP_004334845.1 5205978 R 675635 CDS YP_004334846.1 331698607 10366696 5206634..5206834 1 NC_015312.1 hypothetical protein 5206834 10366696 Psed_4848 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334846.1 5206634 D 675635 CDS YP_004334847.1 331698608 10366697 5207481..5209913 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mjl:Mjls_1106 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; Haemerythrin/HHE cation-binding motif; heavy metal translocating P-type ATPase 5209913 10366697 Psed_4849 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004334847.1 5207481 D 675635 CDS YP_004334848.1 331698609 10366698 5210313..5210642 1 NC_015312.1 hypothetical protein 5210642 10366698 Psed_4850 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334848.1 5210313 D 675635 CDS YP_004334849.1 331698610 10366699 5210639..5211940 1 NC_015312.1 KEGG: kra:Krad_0433 PAS/PAC sensor protein; PFAM: PAS fold-4; SMART: PAS; PAS fold-4 domain-containing protein 5211940 10366699 Psed_4851 Pseudonocardia dioxanivorans CB1190 PAS fold-4 domain-containing protein YP_004334849.1 5210639 D 675635 CDS YP_004334850.1 331698611 10366700 5212565..5212942 1 NC_015312.1 KEGG: xce:Xcel_1117 hypothetical protein; hypothetical protein 5212942 10366700 Psed_4852 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334850.1 5212565 D 675635 CDS YP_004334851.1 331698612 10366701 complement(5213097..5214281) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit 5214281 10366701 Psed_4853 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004334851.1 5213097 R 675635 CDS YP_004334852.1 331698613 10366703 5214732..5215820 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: msp:Mspyr1_54040 site-specific recombinase XerD; integrase protein 5215820 10366703 Psed_4855 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004334852.1 5214732 D 675635 CDS YP_004334853.1 331698614 10366704 5215817..5216134 1 NC_015312.1 KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator 5216134 10366704 Psed_4856 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004334853.1 5215817 D 675635 CDS YP_004334854.1 331698615 10366705 5216201..5217847 1 NC_015312.1 KEGG: rer:pREL1_0202 hypothetical protein; manually curated; PFAM: Integrase, N-terminal SAM-like, phage; integrase domain-containing protein SAM domain-containing protein 5217847 10366705 Psed_4857 Pseudonocardia dioxanivorans CB1190 integrase domain-containing protein SAM domain-containing protein YP_004334854.1 5216201 D 675635 CDS YP_004334855.1 331698616 10366706 complement(5217744..5218493) 1 NC_015312.1 KEGG: rer:pREL1_0203 transposition helper protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 5218493 10366706 Psed_4858 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004334855.1 5217744 R 675635 CDS YP_004334856.1 331698617 10366707 complement(5218565..5219677) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: tpr:Tpau_1024 integrase catalytic region; integrase catalytic subunit 5219677 10366707 Psed_4859 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004334856.1 5218565 R 675635 CDS YP_004334857.1 331698618 10366708 complement(5220006..5220206) 1 NC_015312.1 hypothetical protein 5220206 10366708 Psed_4860 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334857.1 5220006 R 675635 CDS YP_004334858.1 331698619 10366709 5220761..5221759 1 NC_015312.1 PFAM: Cell shape determining protein MreB/Mrl; KEGG: rop:ROP_03780 rod shape-determining protein MreB; cell shape determining protein MreB/Mrl 5221759 10366709 Psed_4861 Pseudonocardia dioxanivorans CB1190 cell shape determining protein MreB/Mrl YP_004334858.1 5220761 D 675635 CDS YP_004334859.1 331698620 10366710 5221807..5223429 1 NC_015312.1 KEGG: fri:FraEuI1c_6395 hypothetical protein; hypothetical protein 5223429 10366710 Psed_4862 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334859.1 5221807 D 675635 CDS YP_004334860.1 331698621 10366711 complement(5223488..5224342) 1 NC_015312.1 KEGG: fri:FraEuI1c_3801 hypothetical protein; hypothetical protein 5224342 10366711 Psed_4863 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334860.1 5223488 R 675635 CDS YP_004334861.1 331698622 10366712 5224392..5225126 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: fri:FraEuI1c_3800 polysaccharide deacetylase; polysaccharide deacetylase 5225126 10366712 Psed_4864 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004334861.1 5224392 D 675635 CDS YP_004334862.1 331698623 10366713 complement(5224962..5226248) 1 NC_015312.1 PFAM: Monogalactosyldiacylglycerol synthase; KEGG: saq:Sare_0629 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like protein; monogalactosyldiacylglycerol synthase 5226248 10366713 Psed_4865 Pseudonocardia dioxanivorans CB1190 monogalactosyldiacylglycerol synthase YP_004334862.1 5224962 R 675635 CDS YP_004334863.1 331698624 10366714 complement(5226264..5227727) 1 NC_015312.1 KEGG: sro:Sros_5318 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SNARE associated Golgi protein; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 5227727 10366714 Psed_4866 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004334863.1 5226264 R 675635 CDS YP_004334864.1 331698625 10366715 complement(5227750..5228655) 1 NC_015312.1 KEGG: nca:Noca_1553 undecaprenyl-diphosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 5228655 10366715 Psed_4867 Pseudonocardia dioxanivorans CB1190 phosphoesterase PA-phosphatase-like protein YP_004334864.1 5227750 R 675635 CDS YP_004334865.1 331698626 10366716 5228706..5229236 1 NC_015312.1 PFAM: Penicillinase repressor; KEGG: sco:SCO6358 hypothetical protein; CopY family transcriptional regulator 5229236 10366716 Psed_4868 Pseudonocardia dioxanivorans CB1190 CopY family transcriptional regulator YP_004334865.1 5228706 D 675635 CDS YP_004334866.1 331698627 10366717 5229251..5230390 1 NC_015312.1 PFAM: Peptidase M48; KEGG: cai:Caci_9019 peptidase M48 Ste24p; peptidase M48 Ste24p 5230390 10366717 Psed_4869 Pseudonocardia dioxanivorans CB1190 peptidase M48 Ste24p YP_004334866.1 5229251 D 675635 CDS YP_004334867.1 331698628 10366718 complement(5230471..5233383) 1 NC_015312.1 PFAM: Penicillin-binding protein, transpeptidase; Cell cycle protein; Penicillin-binding protein, dimerisation domain; KEGG: req:REQ_10960 peptidoglycan synthesis protein; penicillin-binding protein transpeptidase 5233383 10366718 Psed_4870 Pseudonocardia dioxanivorans CB1190 penicillin-binding protein transpeptidase YP_004334867.1 5230471 R 675635 CDS YP_004334868.1 331698629 10366719 complement(5233406..5233948) 1 NC_015312.1 KEGG: req:REQ_10950 membrane protein; hypothetical protein 5233948 10366719 Psed_4871 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334868.1 5233406 R 675635 CDS YP_004334869.1 331698630 10366720 complement(5233945..5234355) 1 NC_015312.1 KEGG: cma:Cmaq_1259 fructose-bisphosphate aldolase; hypothetical protein 5234355 10366720 Psed_4872 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334869.1 5233945 R 675635 CDS YP_004334870.1 331698631 10366721 5234740..5235003 1 NC_015312.1 PFAM: Protein of unknown function DUF1876; KEGG: sen:SACE_2426 hypothetical protein; hypothetical protein 5235003 10366721 Psed_4873 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334870.1 5234740 D 675635 CDS YP_004334871.1 331698632 10366722 5235062..5235424 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:gll0133 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 5235424 10366722 Psed_4874 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004334871.1 5235062 D 675635 CDS YP_004334872.1 331698633 10366723 complement(5235551..5236285) 1 NC_015312.1 PFAM: Domain of unknown function DUF125, transmembrane; KEGG: rha:RHA1_ro04892 hypothetical protein; hypothetical protein 5236285 10366723 Psed_4875 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334872.1 5235551 R 675635 CDS YP_004334873.1 331698634 10366724 complement(5236440..5236856) 1 NC_015312.1 KEGG: kfl:Kfla_3387 hypothetical protein; hypothetical protein 5236856 10366724 Psed_4876 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334873.1 5236440 R 675635 CDS YP_004334874.1 331698635 10366725 complement(5236973..5237266) 1 NC_015312.1 hypothetical protein 5237266 10366725 Psed_4877 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334874.1 5236973 R 675635 CDS YP_004334875.1 331698636 10366726 complement(5237405..5238331) 1 NC_015312.1 KEGG: rha:RHA1_ro10169 acylamide amidohydrolase; hypothetical protein 5238331 10366726 Psed_4878 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334875.1 5237405 R 675635 CDS YP_004334876.1 331698637 10366727 5238692..5239171 1 NC_015312.1 KEGG: scb:SCAB_84441 MarR family regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 5239171 10366727 Psed_4879 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004334876.1 5238692 D 675635 CDS YP_004334877.1 331698638 10366729 5240653..5242677 1 NC_015312.1 KEGG: sen:SACE_0923 hypothetical protein; hypothetical protein 5242677 10366729 Psed_4881 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334877.1 5240653 D 675635 CDS YP_004334878.1 331698639 10366730 5242828..5243487 1 NC_015312.1 KEGG: fra:Francci3_2241 hypothetical protein; hypothetical protein 5243487 10366730 Psed_4882 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334878.1 5242828 D 675635 CDS YP_004334879.1 331698640 10366731 5243575..5243859 1 NC_015312.1 TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: krh:KRH_22990 regulatory protein; SMART: Regulatory protein, FmdB; FmdB family regulatory protein 5243859 10366731 Psed_4883 Pseudonocardia dioxanivorans CB1190 FmdB family regulatory protein YP_004334879.1 5243575 D 675635 CDS YP_004334880.1 331698641 10366732 5243886..5245133 1 NC_015312.1 KEGG: sen:SACE_1932 formamidase; PFAM: Acetamidase/Formamidase; formamidase 5245133 10366732 Psed_4884 Pseudonocardia dioxanivorans CB1190 formamidase YP_004334880.1 5243886 D 675635 CDS YP_004334881.1 331698642 10366733 5245208..5246311 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 5246311 10366733 Psed_4885 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004334881.1 5245208 D 675635 CDS YP_004334882.1 331698643 10366734 5246466..5247143 1 NC_015312.1 KEGG: nml:Namu_0765 LuxR family two component transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5247143 10366734 Psed_4886 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334882.1 5246466 D 675635 CDS YP_004334883.1 331698644 10366735 complement(5247202..5247540) 1 NC_015312.1 hypothetical protein 5247540 10366735 Psed_4887 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334883.1 5247202 R 675635 CDS YP_004334884.1 331698645 10366736 complement(5247615..5248457) 1 NC_015312.1 PFAM: FhuF/siderophore biosynthesis protein; KEGG: req:REQ_32280 protein; FhuF/siderophore biosynthesis protein 5248457 10366736 Psed_4888 Pseudonocardia dioxanivorans CB1190 FhuF/siderophore biosynthesis protein YP_004334884.1 5247615 R 675635 CDS YP_004334885.1 331698646 10366737 complement(5248454..5248585) 1 NC_015312.1 hypothetical protein 5248585 10366737 Psed_4889 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334885.1 5248454 R 675635 CDS YP_004334886.1 331698647 10366738 complement(5248592..5248891) 1 NC_015312.1 KEGG: rha:RHA1_ro10171 hypothetical protein; hypothetical protein 5248891 10366738 Psed_4890 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334886.1 5248592 R 675635 CDS YP_004334887.1 331698648 10366739 complement(5248897..5249406) 1 NC_015312.1 hypothetical protein 5249406 10366739 Psed_4891 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334887.1 5248897 R 675635 CDS YP_004334888.1 331698649 10366740 complement(5249680..5251335) 1 NC_015312.1 KEGG: rha:RHA1_ro10172 hypothetical protein; hypothetical protein 5251335 10366740 Psed_4892 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334888.1 5249680 R 675635 CDS YP_004334889.1 331698650 10366741 complement(5251431..5251730) 1 NC_015312.1 KEGG: rha:RHA1_ro10171 hypothetical protein; hypothetical protein 5251730 10366741 Psed_4893 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334889.1 5251431 R 675635 CDS YP_004334890.1 331698651 10366742 complement(5251745..5253208) 1 NC_015312.1 KEGG: rha:RHA1_ro10170 hypothetical protein; hypothetical protein 5253208 10366742 Psed_4894 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334890.1 5251745 R 675635 CDS YP_004334891.1 331698652 10366743 5253251..5254036 1 NC_015312.1 hypothetical protein 5254036 10366743 Psed_4895 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334891.1 5253251 D 675635 CDS YP_004334892.1 331698653 10366744 complement(5253897..5255486) 1 NC_015312.1 KEGG: cai:Caci_3304 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, YjcE-like, bacteria; PFAM: Cation/H+ exchanger; Na+/H+ antiporter 5255486 10366744 Psed_4896 Pseudonocardia dioxanivorans CB1190 Na+/H+ antiporter YP_004334892.1 5253897 R 675635 CDS YP_004334893.1 331698654 10366745 complement(5255599..5256063) 1 NC_015312.1 KEGG: aai:AARI_22160 hypothetical protein; hypothetical protein 5256063 10366745 Psed_4897 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334893.1 5255599 R 675635 CDS YP_004334894.1 331698655 10366747 complement(5256761..5257039) 1 NC_015312.1 KEGG: svi:Svir_15360 hypothetical protein; hypothetical protein 5257039 10366747 Psed_4899 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334894.1 5256761 R 675635 CDS YP_004334895.1 331698656 10366748 complement(5257175..5258392) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_4862 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein 5258392 10366748 Psed_4900 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004334895.1 5257175 R 675635 CDS YP_004334896.1 331698657 10366749 complement(5258508..5259377) 1 NC_015312.1 PFAM: Rhodanese-like; KEGG: cfl:Cfla_0454 rhodanese domain protein; SMART: Rhodanese-like; 3-mercaptopyruvate sulfurtransferase 5259377 10366749 Psed_4901 Pseudonocardia dioxanivorans CB1190 3-mercaptopyruvate sulfurtransferase YP_004334896.1 5258508 R 675635 CDS YP_004334897.1 331698658 10366750 5259567..5260526 1 NC_015312.1 KEGG: scb:SCAB_86601 esterase LipW; esterase 5260526 10366750 Psed_4902 Pseudonocardia dioxanivorans CB1190 esterase YP_004334897.1 5259567 D 675635 CDS YP_004334898.1 331698659 10366751 5260543..5261520 1 NC_015312.1 KEGG: nml:Namu_5170 transcriptional regulator CdaR; transcriptional regulator CdaR 5261520 10366751 Psed_4903 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004334898.1 5260543 D 675635 CDS YP_004334899.1 331698660 10366752 5261599..5262429 1 NC_015312.1 manually curated; PFAM: Beta-lactamase-like; KEGG: sro:Sros_3006 metal-dependent hydrolase; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 5262429 10366752 Psed_4904 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004334899.1 5261599 D 675635 CDS YP_004334900.1 331698661 10366753 complement(5262422..5263456) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: amd:AMED_7205 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 5263456 10366753 Psed_4905 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004334900.1 5262422 R 675635 CDS YP_004334901.1 331698662 10366754 5263483..5264646 1 NC_015312.1 KEGG: rop:ROP_70910 hypothetical protein; hypothetical protein 5264646 10366754 Psed_4906 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334901.1 5263483 D 675635 CDS YP_004334902.1 331698663 10366755 5264634..5265965 1 NC_015312.1 PFAM: Amidohydrolase 3; KEGG: rop:ROP_70920 hypothetical protein; amidohydrolase 5265965 10366755 Psed_4907 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004334902.1 5264634 D 675635 CDS YP_004334903.1 331698664 10366756 complement(5265980..5267470) 1 NC_015312.1 KEGG: fal:FRAAL1950 O-succinylbenzoate--CoA ligase (OSB-CoA synthetase) (O-succinylbenzoyl-CoA synthetase); PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5267470 10366756 Psed_4908 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004334903.1 5265980 R 675635 CDS YP_004334904.1 331698665 10366757 5267569..5267883 1 NC_015312.1 KEGG: rop:ROP_71030 hypothetical protein; hypothetical protein 5267883 10366757 Psed_4909 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334904.1 5267569 D 675635 CDS YP_004334905.1 331698666 10366758 complement(5267950..5270070) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; Glycosyl transferase, family 28, C-terminal; KEGG: bcv:Bcav_2695 alpha/beta hydrolase fold protein; alpha/beta hydrolase 5270070 10366758 Psed_4910 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334905.1 5267950 R 675635 CDS YP_004334906.1 331698667 10366759 complement(5270071..5271150) 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: bcv:Bcav_2696 methyltransferase type 12; type 12 methyltransferase 5271150 10366759 Psed_4911 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004334906.1 5270071 R 675635 CDS YP_004334907.1 331698668 10366760 5271252..5274005 1 NC_015312.1 KEGG: mva:Mvan_3871 regulatory protein, LuxR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5274005 10366760 Psed_4912 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004334907.1 5271252 D 675635 CDS YP_004334908.1 331698669 10366761 complement(5274026..5274793) 1 NC_015312.1 KEGG: cwo:Cwoe_4409 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 5274793 10366761 Psed_4913 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004334908.1 5274026 R 675635 CDS YP_004334909.1 331698670 10366762 5274988..5275668 1 NC_015312.1 PFAM: Glutamine amidotransferase, class-II; KEGG: fal:FRAAL1888 glutamine amidotransferase; glutamine amidotransferase 5275668 10366762 Psed_4914 Pseudonocardia dioxanivorans CB1190 glutamine amidotransferase YP_004334909.1 5274988 D 675635 CDS YP_004334910.1 331698671 10366763 5275656..5276360 1 NC_015312.1 PFAM: Glutamate synthase, alpha subunit, C-terminal; KEGG: fri:FraEuI1c_5163 glutamate synthase alpha subunit domain protein; glutamate synthase subunit alpha domain-containing protein 5276360 10366763 Psed_4915 Pseudonocardia dioxanivorans CB1190 glutamate synthase subunit alpha domain-containing protein YP_004334910.1 5275656 D 675635 CDS YP_004334911.1 331698672 10366764 5276376..5277698 1 NC_015312.1 KEGG: msm:MSMEG_6263 glutamate synthase protein; PFAM: Glutamate synthase, central-C; glutamate synthase 5277698 10366764 Psed_4916 Pseudonocardia dioxanivorans CB1190 glutamate synthase YP_004334911.1 5276376 D 675635 CDS YP_004334912.1 331698673 10366765 5277807..5279162 1 NC_015312.1 TIGRFAM: Glutamine synthetase, type III; KEGG: msm:MSMEG_6260 glutamine synthetase, type III; PFAM: Glutamine synthetase, catalytic domain; glutamine synthetase I 5279162 10366765 Psed_4917 Pseudonocardia dioxanivorans CB1190 glutamine synthetase I YP_004334912.1 5277807 D 675635 CDS YP_004334913.1 331698674 10366766 5279204..5280502 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: mei:Msip34_2428 FAD dependent oxidoreductase; FAD dependent oxidoreductase 5280502 10366766 Psed_4918 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004334913.1 5279204 D 675635 CDS YP_004334914.1 331698675 10366767 5280549..5280800 1 NC_015312.1 PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: sen:SACE_4493 sarcosine oxidase, delta chain; sarcosine oxidase subunit delta 5280800 10366767 Psed_4919 Pseudonocardia dioxanivorans CB1190 sarcosine oxidase subunit delta YP_004334914.1 5280549 D 675635 CDS YP_004334915.1 331698676 10366768 5280797..5283667 1 NC_015312.1 KEGG: bvi:Bcep1808_7300 sarcosine oxidase alpha subunit family protein; PFAM: Glycine cleavage T-protein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Glycine cleavage T-protein, C-terminal barrel; sarcosine oxidase 5283667 10366768 Psed_4920 Pseudonocardia dioxanivorans CB1190 sarcosine oxidase YP_004334915.1 5280797 D 675635 CDS YP_004334916.1 331698677 10366769 5283660..5284358 1 NC_015312.1 PFAM: Sarcosine oxidase, gamma subunit; KEGG: sen:SACE_4491 sarcosine oxidase gamma subunit; sarcosine oxidase subunit gamma 5284358 10366769 Psed_4921 Pseudonocardia dioxanivorans CB1190 sarcosine oxidase subunit gamma YP_004334916.1 5283660 D 675635 CDS YP_004334917.1 331698678 10366770 5284429..5285358 1 NC_015312.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: mbt:JTY_2980 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase 5285358 10366770 Psed_4922 Pseudonocardia dioxanivorans CB1190 formyltetrahydrofolate deformylase YP_004334917.1 5284429 D 675635 CDS YP_004334918.1 331698679 10366771 5285369..5286226 1 NC_015312.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: cwo:Cwoe_3588 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD 5286226 10366771 Psed_4923 Pseudonocardia dioxanivorans CB1190 bifunctional protein folD YP_004334918.1 5285369 D 675635 CDS YP_004334919.1 331698680 10366772 complement(5286241..5287452) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: amd:AMED_4613 acetyl-CoA acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 5287452 10366772 Psed_4924 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004334919.1 5286241 R 675635 CDS YP_004334920.1 331698681 10366773 5288040..5289215 1 NC_015312.1 KEGG: fal:FRAAL4450 monomeric sarcosine oxidase (MSOX); PFAM: FAD dependent oxidoreductase; sarcosine oxidase 5289215 10366773 Psed_4925 Pseudonocardia dioxanivorans CB1190 sarcosine oxidase YP_004334920.1 5288040 D 675635 CDS YP_004334921.1 331698682 10366774 5289307..5290311 1 NC_015312.1 KEGG: rop:ROP_19400 oxygenase; oxygenase 5290311 10366774 Psed_4926 Pseudonocardia dioxanivorans CB1190 oxygenase YP_004334921.1 5289307 D 675635 CDS YP_004334922.1 331698683 10366775 5290308..5290400 1 NC_015312.1 hypothetical protein 5290400 10366775 Psed_4927 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334922.1 5290308 D 675635 CDS YP_004334923.1 331698684 10366776 5290397..5291770 1 NC_015312.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: rha:RHA1_ro02225 nitrilotriacetate monoxygenase, component A; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 5291770 10366776 Psed_4928 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004334923.1 5290397 D 675635 CDS YP_004334924.1 331698685 10366777 5291936..5292946 1 NC_015312.1 KEGG: sma:SAV_7208 ABC transporter permease; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 5292946 10366777 Psed_4929 Pseudonocardia dioxanivorans CB1190 polar amino acid ABC transporter permease YP_004334924.1 5291936 D 675635 CDS YP_004334925.1 331698686 10366778 5292943..5293779 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sma:SAV_7209 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 5293779 10366778 Psed_4930 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004334925.1 5292943 D 675635 CDS YP_004334926.1 331698687 10366779 5293804..5294907 1 NC_015312.1 KEGG: sma:SAV_7210 ABC transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein 5294907 10366779 Psed_4931 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004334926.1 5293804 D 675635 CDS YP_004334927.1 331698688 10366780 5294959..5295687 1 NC_015312.1 PFAM: FR47-like; KEGG: fri:FraEuI1c_3113 FR47 domain protein; FR47 domain-containing protein 5295687 10366780 Psed_4932 Pseudonocardia dioxanivorans CB1190 FR47 domain-containing protein YP_004334927.1 5294959 D 675635 CDS YP_004334928.1 331698689 10366781 complement(5295736..5296548) 1 NC_015312.1 PFAM: Protein of unknown function DUF1684; KEGG: rop:ROP_19320 hypothetical protein; hypothetical protein 5296548 10366781 Psed_4933 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334928.1 5295736 R 675635 CDS YP_004334929.1 331698690 10366783 complement(5296957..5298216) 1 NC_015312.1 KEGG: tbi:Tbis_1595 luciferase-like monooxygenase; TIGRFAM: Luciferase oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase oxidoreductase, group 1 5298216 10366783 Psed_4935 Pseudonocardia dioxanivorans CB1190 luciferase oxidoreductase, group 1 YP_004334929.1 5296957 R 675635 CDS YP_004334930.1 331698691 10366784 complement(5298213..5299889) 1 NC_015312.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fri:FraEuI1c_3109 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphate-transporting ATPase 5299889 10366784 Psed_4936 Pseudonocardia dioxanivorans CB1190 phosphate-transporting ATPase YP_004334930.1 5298213 R 675635 CDS YP_004334931.1 331698692 10366785 complement(5300054..5300152) 1 NC_015312.1 hypothetical protein 5300152 10366785 Psed_4937 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334931.1 5300054 R 675635 CDS YP_004334932.1 331698693 10366786 complement(5300354..5300818) 1 NC_015312.1 KEGG: sma:SAV_3609 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 5300818 10366786 Psed_4938 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004334932.1 5300354 R 675635 CDS YP_004334933.1 331698694 10366787 5300934..5301887 1 NC_015312.1 KEGG: scb:SCAB_20541 lipase; lipase 5301887 10366787 Psed_4939 Pseudonocardia dioxanivorans CB1190 lipase YP_004334933.1 5300934 D 675635 CDS YP_004334934.1 331698695 10366788 complement(5301989..5302927) 1 NC_015312.1 PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: bbt:BBta_2632 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 5302927 10366788 Psed_4940 Pseudonocardia dioxanivorans CB1190 fumarylacetoacetate (FAA) hydrolase YP_004334934.1 5301989 R 675635 CDS YP_004334935.1 331698696 10366789 complement(5302924..5304147) 1 NC_015312.1 KEGG: bbt:BBta_2631 formyl-coenzyme A transferase, L-carnitine dehydratase; PFAM: CoA-transferase III; formyl-CoA transferase 5304147 10366789 Psed_4941 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334935.1 5302924 R 675635 CDS YP_004334936.1 331698697 10366790 complement(5304155..5305012) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: bge:BC1002_4061 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 5305012 10366790 Psed_4942 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004334936.1 5304155 R 675635 CDS YP_004334937.1 331698698 10366791 5305104..5305748 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_3360 transcriptional regulator; TetR family transcriptional regulator 5305748 10366791 Psed_4943 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334937.1 5305104 D 675635 CDS YP_004334938.1 331698699 10366792 complement(5305850..5308312) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; Collagen-binding surface protein Cna-like, B-type domain; KEGG: cai:Caci_4425 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein 5308312 10366792 Psed_4944 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004334938.1 5305850 R 675635 CDS YP_004334939.1 331698700 10366793 5308486..5309046 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: msm:MSMEG_3013 transcriptional regulator family protein; HxlR family transcriptional regulator 5309046 10366793 Psed_4945 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004334939.1 5308486 D 675635 CDS YP_004334940.1 331698701 10366794 5309467..5309937 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fri:FraEuI1c_1863 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5309937 10366794 Psed_4946 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004334940.1 5309467 D 675635 CDS YP_004334941.1 331698702 10366795 5309934..5310284 1 NC_015312.1 KEGG: ccs:CCNA_01339 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 5310284 10366795 Psed_4947 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004334941.1 5309934 D 675635 CDS YP_004334942.1 331698703 10366796 5310281..5310745 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: fri:FraEuI1c_1865 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 5310745 10366796 Psed_4948 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004334942.1 5310281 D 675635 CDS YP_004334943.1 331698704 10366797 5310930..5311778 1 NC_015312.1 KEGG: kfl:Kfla_4633 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain; Hydroxypyruvate isomerase 5311778 10366797 Psed_4949 Pseudonocardia dioxanivorans CB1190 Hydroxypyruvate isomerase YP_004334943.1 5310930 D 675635 CDS YP_004334944.1 331698705 10366798 5311981..5312241 1 NC_015312.1 hypothetical protein 5312241 10366798 Psed_4950 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334944.1 5311981 D 675635 CDS YP_004334945.1 331698706 10366799 5312238..5312525 1 NC_015312.1 hypothetical protein 5312525 10366799 Psed_4951 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334945.1 5312238 D 675635 CDS YP_004334946.1 331698707 10366800 complement(5312483..5315272) 1 NC_015312.1 KEGG: nml:Namu_2934 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; 4Fe-4S binding domain; Cysteine-rich domain; D-lactate dehydrogenase 5315272 10366800 Psed_4952 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase YP_004334946.1 5312483 R 675635 CDS YP_004334947.1 331698708 10366802 5315684..5315818 1 NC_015312.1 hypothetical protein 5315818 10366802 Psed_4954 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334947.1 5315684 D 675635 CDS YP_004334948.1 331698709 10366804 5316133..5316354 1 NC_015312.1 hypothetical protein 5316354 10366804 Psed_4956 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334948.1 5316133 D 675635 CDS YP_004334949.1 331698710 10366806 complement(5317492..5317755) 1 NC_015312.1 hypothetical protein 5317755 10366806 Psed_4958 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334949.1 5317492 R 675635 CDS YP_004334950.1 331698711 10366807 5318028..5319224 1 NC_015312.1 PFAM: Lipase, secreted; KEGG: nml:Namu_3126 secretory lipase; secretory lipase 5319224 10366807 Psed_4959 Pseudonocardia dioxanivorans CB1190 secretory lipase YP_004334950.1 5318028 D 675635 CDS YP_004334951.1 331698712 10366808 5319319..5320284 1 NC_015312.1 KEGG: nml:Namu_5169 alpha/beta hydrolase fold-3 domain-containing protein; alpha/beta hydrolase 5320284 10366808 Psed_4960 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004334951.1 5319319 D 675635 CDS YP_004334952.1 331698713 10366809 5320342..5321364 1 NC_015312.1 KEGG: scb:SCAB_0611 hypothetical protein; hypothetical protein 5321364 10366809 Psed_4961 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334952.1 5320342 D 675635 CDS YP_004334953.1 331698714 10366810 5321404..5321907 1 NC_015312.1 KEGG: cwo:Cwoe_1186 hypothetical protein; hypothetical protein 5321907 10366810 Psed_4962 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334953.1 5321404 D 675635 CDS YP_004334954.1 331698715 10366811 5321904..5322758 1 NC_015312.1 KEGG: amd:AMED_2049 hypothetical protein; hypothetical protein 5322758 10366811 Psed_4963 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334954.1 5321904 D 675635 CDS YP_004334955.1 331698716 10366812 5322809..5323780 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: sma:SAV_5961 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; daunorubicin resistance ABC transporter ATPase subunit 5323780 10366812 Psed_4964 Pseudonocardia dioxanivorans CB1190 daunorubicin resistance ABC transporter ATPase subunit YP_004334955.1 5322809 D 675635 CDS YP_004334956.1 331698717 10366813 5323777..5324595 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: rha:RHA1_ro02603 multidrug ABC transporter permease; ABC transporter 5324595 10366813 Psed_4965 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004334956.1 5323777 D 675635 CDS YP_004334957.1 331698718 10366814 5324626..5324922 1 NC_015312.1 KEGG: kfl:Kfla_0016 hypothetical protein; hypothetical protein 5324922 10366814 Psed_4966 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334957.1 5324626 D 675635 CDS YP_004334958.1 331698719 10366815 complement(5324868..5325647) 1 NC_015312.1 KEGG: nml:Namu_5035 osmosensitive K+ channel histidine kinase-like protein; osmosensitive K+ channel histidine kinase-like protein 5325647 10366815 Psed_4967 Pseudonocardia dioxanivorans CB1190 osmosensitive K+ channel histidine kinase-like protein YP_004334958.1 5324868 R 675635 CDS YP_004334959.1 331698720 10366816 complement(5325717..5326943) 1 NC_015312.1 KEGG: rop:ROP_49960 CaiB/BaiF family protein; PFAM: CoA-transferase III; formyl-CoA transferase 5326943 10366816 Psed_4968 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004334959.1 5325717 R 675635 CDS YP_004334960.1 331698721 10366817 complement(5327008..5327871) 1 NC_015312.1 KEGG: amd:AMED_4854 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase 5327871 10366817 Psed_4969 Pseudonocardia dioxanivorans CB1190 hydroxyquinol 1,2-dioxygenase YP_004334960.1 5327008 R 675635 CDS YP_004334961.1 331698722 10366818 complement(5327979..5328812) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: fal:FRAAL5015 methyltransferase; type 11 methyltransferase 5328812 10366818 Psed_4970 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004334961.1 5327979 R 675635 CDS YP_004334962.1 331698723 10366819 complement(5328836..5329372) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_1865 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 5329372 10366819 Psed_4971 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004334962.1 5328836 R 675635 CDS YP_004334963.1 331698724 10366820 complement(5329369..5329608) 1 NC_015312.1 PFAM: Biotin/lipoyl attachment; KEGG: sjp:SJA_C1-18650 acyltransferase; biotin/lipoyl attachment domain-containing protein 5329608 10366820 Psed_4972 Pseudonocardia dioxanivorans CB1190 biotin/lipoyl attachment domain-containing protein YP_004334963.1 5329369 R 675635 CDS YP_004334964.1 331698725 10366821 complement(5329605..5330585) 1 NC_015312.1 PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: sjp:SJA_C1-18660 pyruvate dehydrogenase E1 component beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 5330585 10366821 Psed_4973 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004334964.1 5329605 R 675635 CDS YP_004334965.1 331698726 10366822 complement(5330597..5331610) 1 NC_015312.1 KEGG: rxy:Rxyl_3050 pyruvate dehydrogenase; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 5331610 10366822 Psed_4974 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004334965.1 5330597 R 675635 CDS YP_004334966.1 331698727 10366823 complement(5332353..5332835) 1 NC_015312.1 KEGG: sma:SAV_1362 transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 5332835 10366823 Psed_4975 Pseudonocardia dioxanivorans CB1190 BadM/Rrf2 family transcriptional regulator YP_004334966.1 5332353 R 675635 CDS YP_004334967.1 331698728 10366824 5332920..5333657 1 NC_015312.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: scl:sce5373 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 5333657 10366824 Psed_4976 Pseudonocardia dioxanivorans CB1190 coenzyme F420-dependent NADP oxidoreductase YP_004334967.1 5332920 D 675635 CDS YP_004334968.1 331698729 10366825 complement(5333667..5334014) 1 NC_015312.1 hypothetical protein 5334014 10366825 Psed_4977 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334968.1 5333667 R 675635 CDS YP_004334969.1 331698730 10366826 5334118..5334291 1 NC_015312.1 hypothetical protein 5334291 10366826 Psed_4978 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334969.1 5334118 D 675635 CDS YP_004334970.1 331698731 10366827 complement(5334356..5334898) 1 NC_015312.1 KEGG: mjl:Mjls_2672 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 5334898 10366827 Psed_4979 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004334970.1 5334356 R 675635 CDS YP_004334971.1 331698732 10366828 complement(5334891..5336729) 1 NC_015312.1 PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; KEGG: fri:FraEuI1c_3288 Cl-channel voltage-gated family protein; Cl- channel voltage-gated family protein 5336729 10366828 Psed_4980 Pseudonocardia dioxanivorans CB1190 Cl- channel voltage-gated family protein YP_004334971.1 5334891 R 675635 CDS YP_004334972.1 331698733 10366829 complement(5336792..5337550) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: reu:Reut_B5245 enoyl-CoA hydratase; enoyl-CoA hydratase 5337550 10366829 Psed_4981 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004334972.1 5336792 R 675635 CDS YP_004334973.1 331698734 10366830 5337626..5338021 1 NC_015312.1 KEGG: rop:ROP_34590 molybdenum-pterin binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, MerR; molybdenum-pterin-binding protein 5338021 10366830 Psed_4982 Pseudonocardia dioxanivorans CB1190 molybdenum-pterin-binding protein YP_004334973.1 5337626 D 675635 CDS YP_004334974.1 331698735 10366831 complement(5337999..5338991) 1 NC_015312.1 KEGG: bbe:BBR47_29730 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; PFAM: Amidohydrolase 2; aminocarboxymuconate-semialdehyde decarboxylase 5338991 10366831 Psed_4983 Pseudonocardia dioxanivorans CB1190 aminocarboxymuconate-semialdehyde decarboxylase YP_004334974.1 5337999 R 675635 CDS YP_004334975.1 331698736 10366832 complement(5339065..5339667) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: msp:Mspyr1_17060 nicotinamidase-like amidase; isochorismatase hydrolase 5339667 10366832 Psed_4984 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004334975.1 5339065 R 675635 CDS YP_004334976.1 331698737 10366833 complement(5339765..5340760) 1 NC_015312.1 TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: sro:Sros_4103 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; zinc-binding alcohol dehydrogenase protein 5340760 10366833 Psed_4985 Pseudonocardia dioxanivorans CB1190 zinc-binding alcohol dehydrogenase protein YP_004334976.1 5339765 R 675635 CDS YP_004334977.1 331698738 10366834 complement(5340767..5341810) 1 NC_015312.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: sco:SCO7594 oxidoreductase; NADP-dependent oxidoreductase domain-containing protein 5341810 10366834 Psed_4986 Pseudonocardia dioxanivorans CB1190 NADP-dependent oxidoreductase domain-containing protein YP_004334977.1 5340767 R 675635 CDS YP_004334978.1 331698739 10366835 complement(5341867..5342157) 1 NC_015312.1 KEGG: amd:AMED_7471 hypothetical protein; hypothetical protein 5342157 10366835 Psed_4987 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334978.1 5341867 R 675635 CDS YP_004334979.1 331698740 10366836 5342350..5342838 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: fre:Franean1_3128 hypothetical protein; hypothetical protein 5342838 10366836 Psed_4988 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334979.1 5342350 D 675635 CDS YP_004334980.1 331698741 10366837 complement(5342976..5345027) 1 NC_015312.1 KEGG: sen:SACE_4181 ATP dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain; PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; DNA primase, small subunit; DNA ligase D 5345027 10366837 Psed_4989 Pseudonocardia dioxanivorans CB1190 DNA ligase D YP_004334980.1 5342976 R 675635 CDS YP_004334981.1 331698742 10366838 complement(5345078..5345518) 1 NC_015312.1 KEGG: amd:AMED_4381 hypothetical protein; hypothetical protein 5345518 10366838 Psed_4990 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334981.1 5345078 R 675635 CDS YP_004334982.1 331698743 10366839 complement(5345521..5345907) 1 NC_015312.1 KEGG: sgr:SGR_330 hypothetical protein; hypothetical protein 5345907 10366839 Psed_4991 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334982.1 5345521 R 675635 CDS YP_004334983.1 331698744 10366840 complement(5345996..5346190) 1 NC_015312.1 hypothetical protein 5346190 10366840 Psed_4992 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334983.1 5345996 R 675635 CDS YP_004334984.1 331698745 10366841 complement(5346237..5347922) 1 NC_015312.1 PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: mba:Mbar_A2518 sulfate transporter; sulfate transporter 5347922 10366841 Psed_4993 Pseudonocardia dioxanivorans CB1190 sulfate transporter YP_004334984.1 5346237 R 675635 CDS YP_004334985.1 331698746 10366842 complement(5348125..5349069) 1 NC_015312.1 KEGG: aba:Acid345_3073 zinc-binding alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase 5349069 10366842 Psed_4994 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004334985.1 5348125 R 675635 CDS YP_004334986.1 331698747 10366843 complement(5349125..5350042) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: mno:Mnod_8441 alcohol dehydrogenase GroES domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 5350042 10366843 Psed_4995 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004334986.1 5349125 R 675635 CDS YP_004334987.1 331698748 10366844 5350369..5350980 1 NC_015312.1 PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: nml:Namu_0604 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein 5350980 10366844 Psed_4996 Pseudonocardia dioxanivorans CB1190 oxidoreductase molybdopterin binding protein YP_004334987.1 5350369 D 675635 CDS YP_004334988.1 331698749 10366845 5350977..5351699 1 NC_015312.1 PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; KEGG: sco:SCO7059 oxidoreductase; oxidoreductase FAD-binding domain-containing protein 5351699 10366845 Psed_4997 Pseudonocardia dioxanivorans CB1190 oxidoreductase FAD-binding domain-containing protein YP_004334988.1 5350977 D 675635 CDS YP_004334989.1 331698750 10366846 5351724..5352167 1 NC_015312.1 KEGG: amd:AMED_7516 hypothetical protein; hypothetical protein 5352167 10366846 Psed_4998 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334989.1 5351724 D 675635 CDS YP_004334990.1 331698751 10366847 5352182..5352712 1 NC_015312.1 PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: nml:Namu_3456 methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 5352712 10366847 Psed_4999 Pseudonocardia dioxanivorans CB1190 peptide methionine sulfoxide reductase YP_004334990.1 5352182 D 675635 CDS YP_004334991.1 331698752 10366848 5352727..5353356 1 NC_015312.1 PFAM: Uracil-DNA glycosylase-like; KEGG: rmu:RMDY18_06580 uracil-DNA glycosylase; uracil-DNA glycosylase 5353356 10366848 Psed_5000 Pseudonocardia dioxanivorans CB1190 uracil-DNA glycosylase YP_004334991.1 5352727 D 675635 CDS YP_004334992.1 331698753 10366849 5353413..5354312 1 NC_015312.1 PFAM: Peroxiredoxin, OsmC-like protein; GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sml:Smlt2722 OsmC-like protein; OsmC family protein 5354312 10366849 Psed_5001 Pseudonocardia dioxanivorans CB1190 OsmC family protein YP_004334992.1 5353413 D 675635 CDS YP_004334993.1 331698754 10366850 complement(5354447..5354776) 1 NC_015312.1 KEGG: sil:SPO2304 hypothetical protein; hypothetical protein 5354776 10366850 Psed_5002 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334993.1 5354447 R 675635 CDS YP_004334994.1 331698755 10366851 complement(5354808..5356454) 1 NC_015312.1 KEGG: req:REQ_31880 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 5356454 10366851 Psed_5003 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase subunit I YP_004334994.1 5354808 R 675635 CDS YP_004334995.1 331698756 10366852 complement(5356640..5357233) 1 NC_015312.1 PFAM: Ferritin/Dps protein; KEGG: sna:Snas_3834 ferritin Dps family protein; ferritin 5357233 10366852 Psed_5004 Pseudonocardia dioxanivorans CB1190 ferritin YP_004334995.1 5356640 R 675635 CDS YP_004334996.1 331698757 10366853 complement(5357230..5358429) 1 NC_015312.1 KEGG: svi:Svir_15970 transaldolase; TIGRFAM: Transaldolase 2; PFAM: Transaldolase; transaldolase 5358429 10366853 Psed_5005 Pseudonocardia dioxanivorans CB1190 transaldolase YP_004334996.1 5357230 R 675635 CDS YP_004334997.1 331698758 10366854 5359177..5359854 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bph:Bphy_3981 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 5359854 10366854 Psed_5006 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004334997.1 5359177 D 675635 CDS YP_004334998.1 331698759 10366855 complement(5359971..5360576) 1 NC_015312.1 KEGG: fri:FraEuI1c_4054 regulatory protein TetR; hypothetical protein 5360576 10366855 Psed_5007 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004334998.1 5359971 R 675635 CDS YP_004334999.1 331698760 10366856 5360957..5361628 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: saq:Sare_4813 TetR family transcriptional regulator; TetR family transcriptional regulator 5361628 10366856 Psed_5008 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004334999.1 5360957 D 675635 CDS YP_004335000.1 331698761 10366857 complement(5361714..5362538) 1 NC_015312.1 KEGG: mjl:Mjls_0756 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; estradiol 17-beta-dehydrogenase 5362538 10366857 Psed_5009 Pseudonocardia dioxanivorans CB1190 estradiol 17-beta-dehydrogenase YP_004335000.1 5361714 R 675635 CDS YP_004335001.1 331698762 10366858 5362661..5362972 1 NC_015312.1 KEGG: jan:Jann_0359 hypothetical protein; hypothetical protein 5362972 10366858 Psed_5010 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335001.1 5362661 D 675635 CDS YP_004335002.1 331698763 10366859 complement(5362996..5363919) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msp:Mspyr1_20300 transcriptional regulator, LysR family; LysR family transcriptional regulator 5363919 10366859 Psed_5011 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004335002.1 5362996 R 675635 CDS YP_004335003.1 331698764 10366860 complement(5364025..5364345) 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sro:Sros_8702 hypothetical protein; antibiotic biosynthesis monooxygenase 5364345 10366860 Psed_5012 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004335003.1 5364025 R 675635 CDS YP_004335004.1 331698765 10366861 complement(5364501..5365226) 1 NC_015312.1 hypothetical protein 5365226 10366861 Psed_5013 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335004.1 5364501 R 675635 CDS YP_004335005.1 331698766 10366862 complement(5365294..5366421) 1 NC_015312.1 KEGG: svi:Svir_36320 esterase/lipase; esterase 5366421 10366862 Psed_5014 Pseudonocardia dioxanivorans CB1190 esterase YP_004335005.1 5365294 R 675635 CDS YP_004335006.1 331698767 10366863 complement(5366456..5367460) 1 NC_015312.1 KEGG: sen:SACE_3297 cobalamin synthesis protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; cobalamin synthesis protein P47K 5367460 10366863 Psed_5015 Pseudonocardia dioxanivorans CB1190 cobalamin synthesis protein P47K YP_004335006.1 5366456 R 675635 CDS YP_004335007.1 331698768 10366864 5367531..5368097 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: svi:Svir_02520 polyketide cyclase / dehydrase and lipid transport; polyketide cyclase/dehydrase 5368097 10366864 Psed_5016 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004335007.1 5367531 D 675635 CDS YP_004335008.1 331698769 10366865 5368102..5369064 1 NC_015312.1 KEGG: saq:Sare_3490 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase; fructokinase 5369064 10366865 Psed_5017 Pseudonocardia dioxanivorans CB1190 fructokinase YP_004335008.1 5368102 D 675635 CDS YP_004335009.1 331698770 10366866 5369449..5369880 1 NC_015312.1 PFAM: Protein of unknown function DUF985; KEGG: rop:ROP_50890 hypothetical protein; hypothetical protein 5369880 10366866 Psed_5018 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335009.1 5369449 D 675635 CDS YP_004335010.1 331698771 10366867 5369926..5370492 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: rop:ROP_63340 hypothetical protein; hypothetical protein 5370492 10366867 Psed_5019 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335010.1 5369926 D 675635 CDS YP_004335011.1 331698772 10366868 complement(5370518..5371540) 1 NC_015312.1 KEGG: mil:ML5_2527 php domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 5371540 10366868 Psed_5020 Pseudonocardia dioxanivorans CB1190 PHP domain-containing protein YP_004335011.1 5370518 R 675635 CDS YP_004335012.1 331698773 10366869 complement(5371575..5373095) 1 NC_015312.1 KEGG: ami:Amir_1092 CHAD domain containing protein; PFAM: CHAD; SMART: CHAD; CHAD domain-containing protein 5373095 10366869 Psed_5021 Pseudonocardia dioxanivorans CB1190 CHAD domain-containing protein YP_004335012.1 5371575 R 675635 CDS YP_004335013.1 331698774 10366870 complement(5373134..5374606) 1 NC_015312.1 KEGG: rop:ROP_30580 FAD-linked oxidase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 5374606 10366870 Psed_5022 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase YP_004335013.1 5373134 R 675635 CDS YP_004335014.1 331698775 10366871 complement(5374617..5375561) 1 NC_015312.1 PFAM: Amine oxidase; KEGG: mau:Micau_2203 amine oxidase; amine oxidase 5375561 10366871 Psed_5023 Pseudonocardia dioxanivorans CB1190 amine oxidase YP_004335014.1 5374617 R 675635 CDS YP_004335015.1 331698776 10366872 complement(5375805..5376779) 1 NC_015312.1 KEGG: ami:Amir_0452 O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; mandelate racemase 5376779 10366872 Psed_5024 Pseudonocardia dioxanivorans CB1190 mandelate racemase YP_004335015.1 5375805 R 675635 CDS YP_004335016.1 331698777 10366873 complement(5376776..5378257) 1 NC_015312.1 KEGG: cti:RALTA_A3198 cyclohexanone monooxygenase, flavin-containing monooxygenase (FMO); PFAM: FAD dependent oxidoreductase; 4-hydroxyacetophenone monooxygenase 5378257 10366873 Psed_5025 Pseudonocardia dioxanivorans CB1190 4-hydroxyacetophenone monooxygenase YP_004335016.1 5376776 R 675635 CDS YP_004335017.1 331698778 10366874 5378326..5378937 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tcu:Tcur_3836 TetR family transcriptional regulator; TetR family transcriptional regulator 5378937 10366874 Psed_5026 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335017.1 5378326 D 675635 CDS YP_004335018.1 331698779 10366875 5378961..5379707 1 NC_015312.1 PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: fal:FRAAL4326 iron utilization protein (partial match); FAD-binding 9 siderophore-interacting domain-containing protein 5379707 10366875 Psed_5027 Pseudonocardia dioxanivorans CB1190 FAD-binding 9 siderophore-interacting domain-containing protein YP_004335018.1 5378961 D 675635 CDS YP_004335019.1 331698780 10366876 5379786..5380529 1 NC_015312.1 KEGG: kra:Krad_3036 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5380529 10366876 Psed_5028 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335019.1 5379786 D 675635 CDS YP_004335020.1 331698781 10366877 5380526..5382046 1 NC_015312.1 KEGG: amd:AMED_6746 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 5382046 10366877 Psed_5029 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335020.1 5380526 D 675635 CDS YP_004335021.1 331698782 10366878 complement(5382022..5383035) 1 NC_015312.1 KEGG: amd:AMED_1207 undecaprenyl-diphosphatase; HAMAP: Bacitracin resistance protein BacA; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase 5383035 10366878 Psed_5030 Pseudonocardia dioxanivorans CB1190 UDP-diphosphatase YP_004335021.1 5382022 R 675635 CDS YP_004335022.1 331698783 10366879 complement(5383083..5384570) 1 NC_015312.1 KEGG: amd:AMED_7688 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 5384570 10366879 Psed_5031 Pseudonocardia dioxanivorans CB1190 cell envelope-related transcriptional attenuator YP_004335022.1 5383083 R 675635 CDS YP_004335023.1 331698784 10366880 5384912..5385871 1 NC_015312.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: amd:AMED_1208 hypothetical protein; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein 5385871 10366880 Psed_5032 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase caa3-type, assembly factor CtaG-like protein YP_004335023.1 5384912 D 675635 CDS YP_004335024.1 331698785 10366881 5386046..5387308 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; GtrA-like protein; KEGG: fra:Francci3_0318 glycosyl transferase protein; family 2 glycosyl transferase 5387308 10366881 Psed_5033 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004335024.1 5386046 D 675635 CDS YP_004335025.1 331698786 10366882 5387305..5389428 1 NC_015312.1 PFAM: Glycosyl transferase, family 39; KEGG: fal:FRAAL3990 integral membrane protein; glycosyl transferase protein 5389428 10366882 Psed_5034 Pseudonocardia dioxanivorans CB1190 glycosyl transferase protein YP_004335025.1 5387305 D 675635 CDS YP_004335026.1 331698787 10366883 complement(5389486..5390064) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_6683 TetR family transcriptional regulator; TetR family transcriptional regulator 5390064 10366883 Psed_5035 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335026.1 5389486 R 675635 CDS YP_004335027.1 331698788 10366884 5390104..5390550 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: amd:AMED_6353 hypothetical protein; polyketide cyclase/dehydrase 5390550 10366884 Psed_5036 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004335027.1 5390104 D 675635 CDS YP_004335028.1 331698789 10366885 5390582..5392243 1 NC_015312.1 KEGG: sen:SACE_1293 acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5392243 10366885 Psed_5037 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004335028.1 5390582 D 675635 CDS YP_004335029.1 331698790 10366886 5392464..5393627 1 NC_015312.1 KEGG: scb:SCAB_85211 hypothetical protein; hypothetical protein 5393627 10366886 Psed_5038 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335029.1 5392464 D 675635 CDS YP_004335030.1 331698791 10366887 5393696..5394205 1 NC_015312.1 PFAM: Domain of unknown function DUF304l; KEGG: sen:SACE_1222 membrane-flanked domain-containing protein; hypothetical protein 5394205 10366887 Psed_5039 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335030.1 5393696 D 675635 CDS YP_004335031.1 331698792 10366888 5394202..5395857 1 NC_015312.1 PFAM: Domain of unknown function DUF304l; KEGG: ami:Amir_1063 membrane-flanked domain protein; hypothetical protein 5395857 10366888 Psed_5040 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335031.1 5394202 D 675635 CDS YP_004335032.1 331698793 10366889 complement(5395768..5397330) 1 NC_015312.1 PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, KEGG: amd:AMED_7081 hypothetical protein; hypothetical protein 5397330 10366889 Psed_5041 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335032.1 5395768 R 675635 CDS YP_004335033.1 331698794 10366890 5397362..5397976 1 NC_015312.1 HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: sen:SACE_1292 oligoribonuclease; SMART: Exonuclease; oligoribonuclease 5397976 10366890 Psed_5042 Pseudonocardia dioxanivorans CB1190 oligoribonuclease YP_004335033.1 5397362 D 675635 CDS YP_004335034.1 331698795 10366893 complement(5398494..5399063) 1 NC_015312.1 KEGG: rso:RSc2905 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5399063 10366893 Psed_5043 Pseudonocardia dioxanivorans CB1190 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_004335034.1 5398494 R 675635 CDS YP_004335035.1 331698796 10366894 complement(5399060..5399761) 1 NC_015312.1 PFAM: Isochorismatase-like; KEGG: rhi:NGR_b01900 N-carbamoylsarcosine amidase; isochorismatase hydrolase 5399761 10366894 Psed_5044 Pseudonocardia dioxanivorans CB1190 isochorismatase hydrolase YP_004335035.1 5399060 R 675635 CDS YP_004335036.1 331698797 10366895 5400032..5400889 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: bbt:BBta_1368 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 5400889 10366895 Psed_5045 Pseudonocardia dioxanivorans CB1190 taurine-transporting AtPase YP_004335036.1 5400032 D 675635 CDS YP_004335037.1 331698798 10366896 5400861..5401691 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rhi:NGR_b01890 amino acid ABC transporter, permease; ABC transporter permease 5401691 10366896 Psed_5046 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004335037.1 5400861 D 675635 CDS YP_004335038.1 331698799 10366897 5401740..5402762 1 NC_015312.1 KEGG: vap:Vapar_0154 extracellular solute-binding protein, family 3; hypothetical protein 5402762 10366897 Psed_5047 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335038.1 5401740 D 675635 CDS YP_004335039.1 331698800 10366898 5402776..5404224 1 NC_015312.1 KEGG: sto:ST0052 hypothetical protein; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; UbiD family decarboxylase 5404224 10366898 Psed_5048 Pseudonocardia dioxanivorans CB1190 UbiD family decarboxylase YP_004335039.1 5402776 D 675635 CDS YP_004335040.1 331698801 10366899 5404250..5404981 1 NC_015312.1 KEGG: bpy:Bphyt_6204 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 5404981 10366899 Psed_5049 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004335040.1 5404250 D 675635 CDS YP_004335041.1 331698802 10366900 5404989..5406140 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4340 major facilitator transporter; major facilitator superfamily protein 5406140 10366900 Psed_5050 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004335041.1 5404989 D 675635 CDS YP_004335042.1 331698803 10366901 5406157..5407059 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: sen:SACE_2644 LysR family transcriptional regulator; LysR family transcriptional regulator 5407059 10366901 Psed_5051 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004335042.1 5406157 D 675635 CDS YP_004335043.1 331698804 10366902 5407139..5408134 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: swi:Swit_1683 amidohydrolase 2; amidohydrolase 5408134 10366902 Psed_5052 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004335043.1 5407139 D 675635 CDS YP_004335044.1 331698805 10366903 5408131..5408961 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rlg:Rleg_5072 alpha/beta hydrolase fold protein; alpha/beta hydrolase 5408961 10366903 Psed_5053 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004335044.1 5408131 D 675635 CDS YP_004335045.1 331698806 10366904 5408958..5409845 1 NC_015312.1 KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 5409845 10366904 Psed_5054 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335045.1 5408958 D 675635 CDS YP_004335046.1 331698807 10366905 5409838..5410329 1 NC_015312.1 KEGG: rxy:Rxyl_1873 (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 5410329 10366905 Psed_5055 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335046.1 5409838 D 675635 CDS YP_004335047.1 331698808 10366906 5410316..5412682 1 NC_015312.1 KEGG: tro:trd_0579 oxidoreductase, large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 5412682 10366906 Psed_5056 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335047.1 5410316 D 675635 CDS YP_004335048.1 331698809 10366907 5412670..5413239 1 NC_015312.1 KEGG: fre:Franean1_3210 carbon monoxide dehydrogenase subunit G; hypothetical protein 5413239 10366907 Psed_5057 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335048.1 5412670 D 675635 CDS YP_004335049.1 331698810 10366908 5413687..5414688 1 NC_015312.1 KEGG: mka:MK0724 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 5414688 10366908 Psed_5058 Pseudonocardia dioxanivorans CB1190 UDP-glucose 4-epimerase YP_004335049.1 5413687 D 675635 CDS YP_004335050.1 331698811 10366909 5414792..5415592 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rhi:NGR_b01850 hypothetical protein; alpha/beta hydrolase 5415592 10366909 Psed_5059 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004335050.1 5414792 D 675635 CDS YP_004335051.1 331698812 10366910 5415623..5416777 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: rhi:NGR_b01860 probable monooxygenase; luciferase-like protein 5416777 10366910 Psed_5060 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004335051.1 5415623 D 675635 CDS YP_004335052.1 331698813 10366911 5416811..5417665 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mkm:Mkms_3844 alpha/beta hydrolase fold; alpha/beta hydrolase 5417665 10366911 Psed_5061 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004335052.1 5416811 D 675635 CDS YP_004335053.1 331698814 10366912 5417834..5418556 1 NC_015312.1 KEGG: cag:Cagg_0349 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator 5418556 10366912 Psed_5062 Pseudonocardia dioxanivorans CB1190 Crp/Fnr family transcriptional regulator YP_004335053.1 5417834 D 675635 CDS YP_004335054.1 331698815 10366913 complement(5418579..5419280) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: ami:Amir_5484 mycothiol-dependent maleylpyruvate isomerase; hypothetical protein 5419280 10366913 Psed_5063 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335054.1 5418579 R 675635 CDS YP_004335055.1 331698816 10366914 complement(5419277..5420962) 1 NC_015312.1 KEGG: saq:Sare_4933 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; (2,3-dihydroxybenzoyl)adenylate synthase 5420962 10366914 Psed_5064 Pseudonocardia dioxanivorans CB1190 (2,3-dihydroxybenzoyl)adenylate synthase YP_004335055.1 5419277 R 675635 CDS YP_004335056.1 331698817 10366915 complement(5420943..5422985) 1 NC_015312.1 KEGG: cfl:Cfla_0296 CoA-binding domain protein; PFAM: CoA-binding; SMART: CoA-binding; CoA-binding domain-containing protein 5422985 10366915 Psed_5065 Pseudonocardia dioxanivorans CB1190 CoA-binding domain-containing protein YP_004335056.1 5420943 R 675635 CDS YP_004335057.1 331698818 10366916 complement(5422982..5424547) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: cwo:Cwoe_2817 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein 5424547 10366916 Psed_5066 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004335057.1 5422982 R 675635 CDS YP_004335058.1 331698819 10366917 complement(5424547..5425359) 1 NC_015312.1 KEGG: cfl:Cfla_0281 fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 5425359 10366917 Psed_5067 Pseudonocardia dioxanivorans CB1190 ureidoglycolate lyase YP_004335058.1 5424547 R 675635 CDS YP_004335059.1 331698820 10366918 complement(5425356..5426441) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: aau:AAur_0331 gentisate 1,2-dioxygenase; cupin 5426441 10366918 Psed_5068 Pseudonocardia dioxanivorans CB1190 cupin YP_004335059.1 5425356 R 675635 CDS YP_004335060.1 331698821 10366919 complement(5426803..5427627) 1 NC_015312.1 PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal; KEGG: bbe:BBR47_49950 phenylacetic acid degradation operon negative regulatory protein; PaaX family transcriptional regulator 5427627 10366919 Psed_5069 Pseudonocardia dioxanivorans CB1190 PaaX family transcriptional regulator YP_004335060.1 5426803 R 675635 CDS YP_004335061.1 331698822 10366920 complement(5427805..5428440) 1 NC_015312.1 PFAM: SNARE associated Golgi protein; KEGG: mul:MUL_3280 transmembrane protein DedA; hypothetical protein 5428440 10366920 Psed_5070 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335061.1 5427805 R 675635 CDS YP_004335062.1 331698823 10366921 5428579..5429736 1 NC_015312.1 KEGG: tbi:Tbis_2824 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 5429736 10366921 Psed_5071 Pseudonocardia dioxanivorans CB1190 glucose sorbosone dehydrogenase YP_004335062.1 5428579 D 675635 CDS YP_004335063.1 331698824 10366922 5429804..5430118 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ccs:CCNA_02049 ABM superfamily monooxygenase; antibiotic biosynthesis monooxygenase 5430118 10366922 Psed_5072 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004335063.1 5429804 D 675635 CDS YP_004335064.1 331698825 10366923 complement(5430134..5431639) 1 NC_015312.1 TIGRFAM: Glycerol kinase; KEGG: saq:Sare_4607 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; glycerol kinase 5431639 10366923 Psed_5073 Pseudonocardia dioxanivorans CB1190 glycerol kinase YP_004335064.1 5430134 R 675635 CDS YP_004335065.1 331698826 10366924 complement(5431737..5432498) 1 NC_015312.1 KEGG: gob:Gobs_5039 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 5432498 10366924 Psed_5074 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004335065.1 5431737 R 675635 CDS YP_004335066.1 331698827 10366925 5432679..5433497 1 NC_015312.1 KEGG: sro:Sros_7483 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein; MIP family channel protein 5433497 10366925 Psed_5075 Pseudonocardia dioxanivorans CB1190 MIP family channel protein YP_004335066.1 5432679 D 675635 CDS YP_004335067.1 331698828 10366926 5433516..5435033 1 NC_015312.1 PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; TIGRFAM: Glycerol kinase; HAMAP: Glycerol kinase; KEGG: kfl:Kfla_3196 glycerol kinase; glycerol kinase 5435033 10366926 Psed_5076 Pseudonocardia dioxanivorans CB1190 glycerol kinase YP_004335067.1 5433516 D 675635 CDS YP_004335068.1 331698829 10366927 5435068..5436777 1 NC_015312.1 KEGG: scb:SCAB_36181 glycerol phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 5436777 10366927 Psed_5077 Pseudonocardia dioxanivorans CB1190 glycerol-3-phosphate dehydrogenase YP_004335068.1 5435068 D 675635 CDS YP_004335069.1 331698830 10366928 complement(5436833..5438050) 1 NC_015312.1 TIGRFAM: Kynureninase; KEGG: amd:AMED_6396 kynureninase; PFAM: Aminotransferase, class V/Cysteine desulfurase; kynureninase 5438050 10366928 Psed_5078 Pseudonocardia dioxanivorans CB1190 kynureninase YP_004335069.1 5436833 R 675635 CDS YP_004335070.1 331698831 10366929 complement(5438053..5438898) 1 NC_015312.1 PFAM: Tryptophan 2,3-dioxygenase; KEGG: kra:Krad_1864 tryptophan 23-dioxygenase; tryptophan 23-dioxygenase 5438898 10366929 Psed_5079 Pseudonocardia dioxanivorans CB1190 tryptophan 23-dioxygenase YP_004335070.1 5438053 R 675635 CDS YP_004335071.1 331698832 10366930 complement(5438973..5439698) 1 NC_015312.1 KEGG: sna:Snas_2830 transcriptional regulator; transcriptional regulator 5439698 10366930 Psed_5080 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004335071.1 5438973 R 675635 CDS YP_004335072.1 331698833 10366931 5439796..5440224 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: rha:RHA1_ro04235 hypothetical protein; DoxX family protein 5440224 10366931 Psed_5081 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004335072.1 5439796 D 675635 CDS YP_004335073.1 331698834 10366932 complement(5440378..5441589) 1 NC_015312.1 KEGG: amd:AMED_3585 YVTN beta-propeller repeat-containing protein; hypothetical protein 5441589 10366932 Psed_5082 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335073.1 5440378 R 675635 CDS YP_004335074.1 331698835 10366933 complement(5441600..5442385) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: amd:AMED_3586 polysaccharide deacetylase; polysaccharide deacetylase 5442385 10366933 Psed_5083 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004335074.1 5441600 R 675635 CDS YP_004335075.1 331698836 10366934 5442674..5444380 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fri:FraEuI1c_1649 major facilitator superfamily MFS_1; major facilitator superfamily protein 5444380 10366934 Psed_5084 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004335075.1 5442674 D 675635 CDS YP_004335076.1 331698837 10366935 5444393..5445550 1 NC_015312.1 PFAM: esterase; KEGG: amd:AMED_0317 esterase/lipase-like protein; esterase 5445550 10366935 Psed_5085 Pseudonocardia dioxanivorans CB1190 esterase YP_004335076.1 5444393 D 675635 CDS YP_004335077.1 331698838 10366936 complement(5445631..5447067) 1 NC_015312.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: kfl:Kfla_1879 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 5447067 10366936 Psed_5086 Pseudonocardia dioxanivorans CB1190 6-phosphogluconate dehydrogenase YP_004335077.1 5445631 R 675635 CDS YP_004335078.1 331698839 10366937 5447213..5448022 1 NC_015312.1 PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 5448022 10366937 Psed_5087 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004335078.1 5447213 D 675635 CDS YP_004335079.1 331698840 10366938 complement(5448024..5448821) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03843; KEGG: sen:SACE_2204 phosphatidylinositol 3-and 4-kinase, catalytic; hypothetical protein 5448821 10366938 Psed_5088 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335079.1 5448024 R 675635 CDS YP_004335080.1 331698841 10366939 complement(5448832..5449401) 1 NC_015312.1 TIGRFAM: Protein of unknown function DUF3090; KEGG: sen:SACE_2203 hypothetical protein; hypothetical protein 5449401 10366939 Psed_5089 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335080.1 5448832 R 675635 CDS YP_004335081.1 331698842 10366940 complement(5449492..5450190) 1 NC_015312.1 TIGRFAM: Phosphomutase MSMEG4193, PFAM: Histidine phosphatase superfamily, clade-1; KEGG: svi:Svir_20000 fructose-2,6-bisphosphatase; SMART: Histidine phosphatase superfamily, clade-1; phosphomutase 5450190 10366940 Psed_5090 Pseudonocardia dioxanivorans CB1190 phosphomutase YP_004335081.1 5449492 R 675635 CDS YP_004335082.1 331698843 10366941 complement(5450258..5451079) 1 NC_015312.1 TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Bacitracin resistance protein BacA; KEGG: rer:RER_32020 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase 5451079 10366941 Psed_5091 Pseudonocardia dioxanivorans CB1190 UDP-diphosphatase YP_004335082.1 5450258 R 675635 CDS YP_004335083.1 331698844 10366942 5451161..5452105 1 NC_015312.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: svi:Svir_20030 predicted oxidoreductase, aryl-alcohol dehydrogenase like protein; NADP-dependent oxidoreductase domain-containing protein 5452105 10366942 Psed_5092 Pseudonocardia dioxanivorans CB1190 NADP-dependent oxidoreductase domain-containing protein YP_004335083.1 5451161 D 675635 CDS YP_004335084.1 331698845 10366943 5452317..5452556 1 NC_015312.1 KEGG: svi:Svir_20050 hypothetical protein; hypothetical protein 5452556 10366943 Psed_5093 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335084.1 5452317 D 675635 CDS YP_004335085.1 331698846 10366944 5452666..5454108 1 NC_015312.1 manually curated; KEGG: nml:Namu_1085 hypothetical protein; hypothetical protein 5454108 10366944 Psed_5094 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335085.1 5452666 D 675635 CDS YP_004335086.1 331698847 10366945 complement(5454175..5455158) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: rha:RHA1_ro02339 NADPH:quinone reductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 5455158 10366945 Psed_5095 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004335086.1 5454175 R 675635 CDS YP_004335087.1 331698848 10366946 complement(5455233..5456042) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_4573 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5456042 10366946 Psed_5096 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004335087.1 5455233 R 675635 CDS YP_004335088.1 331698849 10366947 complement(5456059..5457375) 1 NC_015312.1 KEGG: svi:Svir_17060 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; succinyl-diaminopimelate desuccinylase 5457375 10366947 Psed_5097 Pseudonocardia dioxanivorans CB1190 succinyl-diaminopimelate desuccinylase YP_004335088.1 5456059 R 675635 CDS YP_004335089.1 331698850 10366950 5458043..5458327 1 NC_015312.1 hypothetical protein 5458327 10366950 Psed_5099 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335089.1 5458043 D 675635 CDS YP_004335090.1 331698851 10366951 5458380..5458673 1 NC_015312.1 hypothetical protein 5458673 10366951 Psed_5100 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335090.1 5458380 D 675635 CDS YP_004335091.1 331698852 10366952 5458711..5459193 1 NC_015312.1 KEGG: sen:SACE_5164 phosphohistidine phosphatase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphohistidine phosphatase SixA 5459193 10366952 Psed_5101 Pseudonocardia dioxanivorans CB1190 phosphohistidine phosphatase SixA YP_004335091.1 5458711 D 675635 CDS YP_004335092.1 331698853 10366953 5459409..5460821 1 NC_015312.1 TIGRFAM: Domain of unknown function DUF11; KEGG: sus:Acid_0721 FG-GAP repeat-containing protein; hypothetical protein 5460821 10366953 Psed_5102 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335092.1 5459409 D 675635 CDS YP_004335093.1 331698854 10366954 5461018..5462922 1 NC_015312.1 KEGG: cgr:CAGL0J02552g hypothetical protein; hypothetical protein 5462922 10366954 Psed_5103 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335093.1 5461018 D 675635 CDS YP_004335094.1 331698855 10366955 complement(5463175..5463642) 1 NC_015312.1 KEGG: rop:ROP_16280 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 5463642 10366955 Psed_5104 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004335094.1 5463175 R 675635 CDS YP_004335095.1 331698856 10366956 complement(5463620..5464732) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: rha:RHA1_ro01948 alkanal monooxygenase; luciferase-like protein 5464732 10366956 Psed_5105 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004335095.1 5463620 R 675635 CDS YP_004335096.1 331698857 10366957 5465033..5466259 1 NC_015312.1 KEGG: msl:Msil_1993 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein 5466259 10366957 Psed_5106 Pseudonocardia dioxanivorans CB1190 Radical SAM domain-containing protein YP_004335096.1 5465033 D 675635 CDS YP_004335097.1 331698858 10366958 complement(5466327..5468162) 1 NC_015312.1 PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; KEGG: sro:Sros_6271 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase 5468162 10366958 Psed_5107 Pseudonocardia dioxanivorans CB1190 glucosamine--fructose-6-phosphate aminotransferase YP_004335097.1 5466327 R 675635 CDS YP_004335098.1 331698859 10366959 complement(5468172..5468720) 1 NC_015312.1 KEGG: sco:SCO2788 hypothetical protein; hypothetical protein 5468720 10366959 Psed_5108 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335098.1 5468172 R 675635 CDS YP_004335099.1 331698860 10366960 5468836..5469702 1 NC_015312.1 PFAM: Domain of unknown function DUF559; KEGG: msm:MSMEG_5844 hypothetical protein; hypothetical protein 5469702 10366960 Psed_5109 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335099.1 5468836 D 675635 CDS YP_004335100.1 331698861 10366961 complement(5469900..5473760) 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Pentapeptide repeat; KEGG: ami:Amir_6252 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 5473760 10366961 Psed_5110 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004335100.1 5469900 R 675635 CDS YP_004335101.1 331698862 10366962 5474004..5475563 1 NC_015312.1 KEGG: rha:RHA1_ro02658 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5475563 10366962 Psed_5111 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004335101.1 5474004 D 675635 CDS YP_004335102.1 331698863 10366963 5475628..5476452 1 NC_015312.1 PFAM: Protein of unknown function DUF427; KEGG: rop:ROP_58660 hypothetical protein; hypothetical protein 5476452 10366963 Psed_5112 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335102.1 5475628 D 675635 CDS YP_004335103.1 331698864 10366964 5476504..5477544 1 NC_015312.1 KEGG: nda:Ndas_3206 F420-dependent oxidoreductase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv3520c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 5477544 10366964 Psed_5113 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004335103.1 5476504 D 675635 CDS YP_004335104.1 331698865 10366965 5477558..5478175 1 NC_015312.1 KEGG: rpc:RPC_2505 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 5478175 10366965 Psed_5114 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004335104.1 5477558 D 675635 CDS YP_004335105.1 331698866 10366966 5478383..5482174 1 NC_015312.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: ami:Amir_6253 alpha-ketoglutarate decarboxylase; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoacid dehydrogenase acyltransferase, catalytic domain; 2-oxoglutarate dehydrogenase E1 5482174 10366966 Psed_5115 Pseudonocardia dioxanivorans CB1190 2-oxoglutarate dehydrogenase E1 YP_004335105.1 5478383 D 675635 CDS YP_004335106.1 331698867 10366967 5482276..5482446 1 NC_015312.1 KEGG: ami:Amir_6254 hypothetical protein; hypothetical protein 5482446 10366967 Psed_5116 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335106.1 5482276 D 675635 CDS YP_004335107.1 331698868 10366968 complement(5482498..5482911) 1 NC_015312.1 KEGG: ami:Amir_0541 hypothetical protein; hypothetical protein 5482911 10366968 Psed_5117 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335107.1 5482498 R 675635 CDS YP_004335108.1 331698869 10366969 complement(5482908..5485784) 1 NC_015312.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: ami:Amir_0542 cell divisionFtsK/SpoIIIE; DNA translocase FtsK 5485784 10366969 Psed_5118 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004335108.1 5482908 R 675635 CDS YP_004335109.1 331698870 10366970 complement(5485798..5486046) 1 NC_015312.1 hypothetical protein 5486046 10366970 Psed_5119 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335109.1 5485798 R 675635 CDS YP_004335110.1 331698871 10366971 complement(5486077..5486337) 1 NC_015312.1 KEGG: sen:SACE_0669 hypothetical protein; hypothetical protein 5486337 10366971 Psed_5120 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335110.1 5486077 R 675635 CDS YP_004335111.1 331698872 10366972 complement(5486548..5487207) 1 NC_015312.1 KEGG: sen:SACE_3894 integral membrane protein; hypothetical protein 5487207 10366972 Psed_5121 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335111.1 5486548 R 675635 CDS YP_004335112.1 331698873 10366973 complement(5487382..5488950) 1 NC_015312.1 KEGG: sen:SACE_1822 spore coat protein (outer); PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; Multicopper oxidase, type 1; bilirubin oxidase 5488950 10366973 Psed_5122 Pseudonocardia dioxanivorans CB1190 bilirubin oxidase YP_004335112.1 5487382 R 675635 CDS YP_004335113.1 331698874 10366974 complement(5488947..5489396) 1 NC_015312.1 KEGG: kfl:Kfla_5958 hypothetical protein; hypothetical protein 5489396 10366974 Psed_5123 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335113.1 5488947 R 675635 CDS YP_004335114.1 331698875 10366975 5489486..5489824 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: kfl:Kfla_7067 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 5489824 10366975 Psed_5124 Pseudonocardia dioxanivorans CB1190 PadR-like family transcriptional regulator YP_004335114.1 5489486 D 675635 CDS YP_004335115.1 331698876 10366976 5489806..5490468 1 NC_015312.1 KEGG: mil:ML5_1039 hypothetical protein; hypothetical protein 5490468 10366976 Psed_5125 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335115.1 5489806 D 675635 CDS YP_004335116.1 331698877 10366977 complement(5490518..5491717) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: rha:RHA1_ro11046 limonene 1,2-monooxygenase (NADH-dependent); luciferase-like protein 5491717 10366977 Psed_5126 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004335116.1 5490518 R 675635 CDS YP_004335117.1 331698878 10366978 complement(5491747..5492817) 1 NC_015312.1 PFAM: Helix-turn-helix, Fis-type; GAF; KEGG: msm:MSMEG_1970 sigma factor; Fis family transcriptional regulator 5492817 10366978 Psed_5127 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004335117.1 5491747 R 675635 CDS YP_004335118.1 331698879 10366979 5492993..5493916 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: scb:SCAB_8441 oxidoreductase; short-chain dehydrogenase/reductase SDR 5493916 10366979 Psed_5128 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004335118.1 5492993 D 675635 CDS YP_004335119.1 331698880 10366980 complement(5493907..5494329) 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: mta:Moth_2210 PadR family transcriptional regulator; PadR-like family transcriptional regulator 5494329 10366980 Psed_5129 Pseudonocardia dioxanivorans CB1190 PadR-like family transcriptional regulator YP_004335119.1 5493907 R 675635 CDS YP_004335120.1 331698881 10366981 complement(5494476..5495396) 1 NC_015312.1 PFAM: ABC-type glycine betaine transport system, substrate-binding domain; KEGG: rop:ROP_60640 ABC transporter substrate-binding protein; glycine/betaine ABC transporter substrate-binding protein 5495396 10366981 Psed_5130 Pseudonocardia dioxanivorans CB1190 glycine/betaine ABC transporter substrate-binding protein YP_004335120.1 5494476 R 675635 CDS YP_004335121.1 331698882 10366982 complement(5495430..5496146) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_2815 ABC-type proline/glycine betaine transport systems, permease component; ABC transporter permease 5496146 10366982 Psed_5131 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004335121.1 5495430 R 675635 CDS YP_004335122.1 331698883 10366983 complement(5496143..5496805) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_7958 permease component of ABC-type proline/glycine betaine transport system; ABC transporter permease 5496805 10366983 Psed_5132 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004335122.1 5496143 R 675635 CDS YP_004335123.1 331698884 10366984 complement(5496817..5497899) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: ami:Amir_6271 ABC transporter related; PFAM: ABC transporter-like; glycine/betaine/L-proline ABC transporter ATPase 5497899 10366984 Psed_5133 Pseudonocardia dioxanivorans CB1190 glycine/betaine/L-proline ABC transporter ATPase YP_004335123.1 5496817 R 675635 CDS YP_004335124.1 331698885 10366985 complement(5498044..5500821) 1 NC_015312.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-4; KEGG: ami:Amir_6278 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 5500821 10366985 Psed_5134 Pseudonocardia dioxanivorans CB1190 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004335124.1 5498044 R 675635 CDS YP_004335125.1 331698886 10366986 complement(5501041..5502204) 1 NC_015312.1 KEGG: nfa:nfa47090 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding; malic protein NAD-binding protein 5502204 10366986 Psed_5135 Pseudonocardia dioxanivorans CB1190 malic protein NAD-binding protein YP_004335125.1 5501041 R 675635 CDS YP_004335126.1 331698887 10366987 complement(5502445..5503233) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro03350 hydrolase; alpha/beta hydrolase 5503233 10366987 Psed_5136 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004335126.1 5502445 R 675635 CDS YP_004335127.1 331698888 10366988 5503328..5503702 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sro:Sros_1993 glyoxalase/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5503702 10366988 Psed_5137 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004335127.1 5503328 D 675635 CDS YP_004335128.1 331698889 10366989 complement(5503707..5504051) 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sro:Sros_8702 hypothetical protein; antibiotic biosynthesis monooxygenase 5504051 10366989 Psed_5138 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004335128.1 5503707 R 675635 CDS YP_004335129.1 331698890 10366990 5504237..5504629 1 NC_015312.1 KEGG: amd:AMED_6356 hypothetical protein; hypothetical protein 5504629 10366990 Psed_5139 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335129.1 5504237 D 675635 CDS YP_004335130.1 331698891 10366991 5504626..5504799 1 NC_015312.1 hypothetical protein 5504799 10366991 Psed_5140 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335130.1 5504626 D 675635 CDS YP_004335131.1 331698892 10366992 5504879..5505553 1 NC_015312.1 KEGG: amd:AMED_6358 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5505553 10366992 Psed_5141 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335131.1 5504879 D 675635 CDS YP_004335132.1 331698893 10366993 5505775..5507253 1 NC_015312.1 KEGG: amd:AMED_6359 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; ATPase-like, ATP-binding domain; histidine kinase 5507253 10366993 Psed_5142 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335132.1 5505775 D 675635 CDS YP_004335133.1 331698894 10366994 complement(5507228..5507557) 1 NC_015312.1 KEGG: sen:SACE_6418 hypothetical protein; manually curated; PFAM: Peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B, conserved region 5507557 10366994 Psed_5143 Pseudonocardia dioxanivorans CB1190 peptidase S24/S26A/S26B, conserved region YP_004335133.1 5507228 R 675635 CDS YP_004335134.1 331698895 10366995 5507656..5508069 1 NC_015312.1 TIGRFAM: Superoxide dismutase, Nickel-type; KEGG: sen:SACE_6419 superoxide dismutase; PFAM: Superoxide dismutase, Nickel-type; superoxide dismutase, Ni 5508069 10366995 Psed_5144 Pseudonocardia dioxanivorans CB1190 superoxide dismutase, Ni YP_004335134.1 5507656 D 675635 CDS YP_004335135.1 331698896 10366996 5509091..5509849 1 NC_015312.1 PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: nfa:nfa6830 RNA pseudouridylate synthase; pseudouridine synthase 5509849 10366996 Psed_5145 Pseudonocardia dioxanivorans CB1190 pseudouridine synthase YP_004335135.1 5509091 D 675635 CDS YP_004335136.1 331698897 10366997 5509940..5510431 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: rha:RHA1_ro01543 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 5510431 10366997 Psed_5146 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004335136.1 5509940 D 675635 CDS YP_004335137.1 331698898 10366998 5510491..5511165 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: req:REQ_07710 sam dependent methyltransferase; type 11 methyltransferase 5511165 10366998 Psed_5147 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004335137.1 5510491 D 675635 CDS YP_004335138.1 331698899 10366999 5511193..5511801 1 NC_015312.1 KEGG: amd:AMED_7967 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 5511801 10366999 Psed_5148 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004335138.1 5511193 D 675635 CDS YP_004335139.1 331698900 10367000 complement(5511817..5512347) 1 NC_015312.1 PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 5512347 10367000 Psed_5149 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004335139.1 5511817 R 675635 CDS YP_004335140.1 331698901 10367001 5512469..5513017 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_7968 acetyltransferase; GCN5-like N-acetyltransferase 5513017 10367001 Psed_5150 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004335140.1 5512469 D 675635 CDS YP_004335141.1 331698902 10367002 complement(5512962..5513402) 1 NC_015312.1 KEGG: ami:Amir_6287 hypothetical protein; hypothetical protein 5513402 10367002 Psed_5151 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335141.1 5512962 R 675635 CDS YP_004335142.1 331698903 10367003 5513436..5514365 1 NC_015312.1 KEGG: ami:Amir_6288 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic domain; SMART: Diacylglycerol kinase, catalytic domain; diacylglycerol kinase catalytic subunit 5514365 10367003 Psed_5152 Pseudonocardia dioxanivorans CB1190 diacylglycerol kinase catalytic subunit YP_004335142.1 5513436 D 675635 CDS YP_004335143.1 331698904 10367004 5514782..5515033 1 NC_015312.1 PFAM: Transcription factor WhiB; KEGG: ami:Amir_6289 transcription factor WhiB; transcription factor WhiB 5515033 10367004 Psed_5153 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004335143.1 5514782 D 675635 CDS YP_004335144.1 331698905 10367005 complement(5515270..5516769) 1 NC_015312.1 KEGG: sen:SACE_6427 two-component system sensor kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; PAS fold-4; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; signal transduction histidine kinase 5516769 10367005 Psed_5154 Pseudonocardia dioxanivorans CB1190 signal transduction histidine kinase YP_004335144.1 5515270 R 675635 CDS YP_004335145.1 331698906 10367006 complement(5517026..5517370) 1 NC_015312.1 TIGRFAM: Anti-sigma factor RshA; KEGG: sen:SACE_6429 anti-sigma factor; anti-sigma factor 5517370 10367006 Psed_5155 Pseudonocardia dioxanivorans CB1190 anti-sigma factor YP_004335145.1 5517026 R 675635 CDS YP_004335146.1 331698907 10367007 complement(5517367..5518161) 1 NC_015312.1 KEGG: ami:Amir_6292 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 5518161 10367007 Psed_5156 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004335146.1 5517367 R 675635 CDS YP_004335147.1 331698908 10367008 5518168..5518716 1 NC_015312.1 KEGG: amd:AMED_7976 YbaK/EbsC protein; TIGRFAM: Prolyl-tRNA editing protein, YbaK/EbsC; PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; ybaK/ebsC protein 5518716 10367008 Psed_5157 Pseudonocardia dioxanivorans CB1190 ybaK/ebsC protein YP_004335147.1 5518168 D 675635 CDS YP_004335148.1 331698909 10367009 complement(5518755..5519069) 1 NC_015312.1 KEGG: afo:Afer_1368 protein of unknown function DUF74; HAMAP: Uncharacterised protein family UPF0145; PFAM: Uncharacterised protein family UPF0145; hypothetical protein 5519069 10367009 Psed_5158 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335148.1 5518755 R 675635 CDS YP_004335149.1 331698910 10367010 complement(5519112..5519747) 1 NC_015312.1 KEGG: ami:Amir_6294 hypothetical protein; hypothetical protein 5519747 10367010 Psed_5159 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335149.1 5519112 R 675635 CDS YP_004335150.1 331698911 10367011 complement(5519744..5520556) 1 NC_015312.1 PFAM: Protein of unknown function DUF159; KEGG: amd:AMED_7978 hypothetical protein; hypothetical protein 5520556 10367011 Psed_5160 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335150.1 5519744 R 675635 CDS YP_004335151.1 331698912 10367012 5520589..5521863 1 NC_015312.1 PFAM: Enolpyruvate transferase domain; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: ami:Amir_6296 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 5521863 10367012 Psed_5161 Pseudonocardia dioxanivorans CB1190 3-phosphoshikimate 1-carboxyvinyltransferase YP_004335151.1 5520589 D 675635 CDS YP_004335152.1 331698913 10367013 5521871..5522872 1 NC_015312.1 PFAM: Ribosome biogenesis GTPase RsgA, KEGG: sen:SACE_6436 GTPase EngC; GTPase EngC 5522872 10367013 Psed_5162 Pseudonocardia dioxanivorans CB1190 GTPase EngC YP_004335152.1 5521871 D 675635 CDS YP_004335153.1 331698914 10367014 5522898..5523707 1 NC_015312.1 KEGG: sen:SACE_6437 hypothetical protein; hypothetical protein 5523707 10367014 Psed_5163 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335153.1 5522898 D 675635 CDS YP_004335154.1 331698915 10367015 5523704..5525134 1 NC_015312.1 KEGG: ami:Amir_1754 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 5525134 10367015 Psed_5164 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004335154.1 5523704 D 675635 CDS YP_004335155.1 331698916 10367016 complement(5525139..5525711) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_0302 transcriptional regulator, TetR family; TetR family transcriptional regulator 5525711 10367016 Psed_5165 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335155.1 5525139 R 675635 CDS YP_004335156.1 331698917 10367017 5525808..5526185 1 NC_015312.1 KEGG: mkm:Mkms_2678 hypothetical protein; hypothetical protein 5526185 10367017 Psed_5166 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335156.1 5525808 D 675635 CDS YP_004335157.1 331698918 10367018 complement(5526211..5527854) 1 NC_015312.1 TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; KEGG: sen:SACE_1979 delta-1-pyrroline-5-carboxylate dehydrogenase precursor; PFAM: Aldehyde dehydrogenase domain; delta-1-pyrroline-5-carboxylate dehydrogenase 5527854 10367018 Psed_5167 Pseudonocardia dioxanivorans CB1190 delta-1-pyrroline-5-carboxylate dehydrogenase YP_004335157.1 5526211 R 675635 CDS YP_004335158.1 331698919 10367019 5527939..5528532 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: nml:Namu_4245 hypothetical protein; hypothetical protein 5528532 10367019 Psed_5168 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335158.1 5527939 D 675635 CDS YP_004335159.1 331698920 10367020 complement(5528539..5529411) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: sen:SACE_3450 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 5529411 10367020 Psed_5169 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004335159.1 5528539 R 675635 CDS YP_004335160.1 331698921 10367021 5529525..5530343 1 NC_015312.1 PFAM: Formate/nitrite transporter; KEGG: kra:Krad_3500 formate/nitrite family of transporters-like protein; formate/nitrite transporter 5530343 10367021 Psed_5170 Pseudonocardia dioxanivorans CB1190 formate/nitrite transporter YP_004335160.1 5529525 D 675635 CDS YP_004335161.1 331698922 10367022 complement(5530375..5530881) 1 NC_015312.1 KEGG: ami:Amir_6299 hypothetical protein; hypothetical protein 5530881 10367022 Psed_5171 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335161.1 5530375 R 675635 CDS YP_004335162.1 331698923 10367023 complement(5530906..5532315) 1 NC_015312.1 KEGG: ami:Amir_6300 acyltransferase, WS/DGAT/MGAT; TIGRFAM: Acyltransferase, WS/DGAT/MGAT; PFAM: O-acyltransferase, WSD1, N-terminal; acyltransferase 5532315 10367023 Psed_5172 Pseudonocardia dioxanivorans CB1190 acyltransferase YP_004335162.1 5530906 R 675635 CDS YP_004335163.1 331698924 10367024 5532352..5533122 1 NC_015312.1 KEGG: ami:Amir_6302 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU 5533122 10367024 Psed_5173 Pseudonocardia dioxanivorans CB1190 tRNA/rRNA methyltransferase SpoU YP_004335163.1 5532352 D 675635 CDS YP_004335164.1 331698925 10367025 5533196..5534749 1 NC_015312.1 KEGG: amd:AMED_0219 hypothetical protein; hypothetical protein 5534749 10367025 Psed_5174 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335164.1 5533196 D 675635 CDS YP_004335165.1 331698926 10367026 5534759..5535979 1 NC_015312.1 KEGG: amd:AMED_2112 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase 5535979 10367026 Psed_5175 Pseudonocardia dioxanivorans CB1190 (S)-2-hydroxy-acid oxidase YP_004335165.1 5534759 D 675635 CDS YP_004335166.1 331698927 10367027 5536015..5536239 1 NC_015312.1 KEGG: mil:ML5_0745 hypothetical protein; hypothetical protein 5536239 10367027 Psed_5176 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335166.1 5536015 D 675635 CDS YP_004335167.1 331698928 10367028 complement(5536252..5537124) 1 NC_015312.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HTH transcriptional regulator, MarR; KEGG: ami:Amir_6303 HAD-superfamily hydrolase, subfamily IA, variant 3; SMART: HTH transcriptional regulator, MarR; HAD-superfamily hydrolase 5537124 10367028 Psed_5177 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004335167.1 5536252 R 675635 CDS YP_004335168.1 331698929 10367029 5537267..5538061 1 NC_015312.1 KEGG: rrs:RoseRS_1726 dihydrolipoyllysine-residue succinyltransferase; hypothetical protein 5538061 10367029 Psed_5178 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335168.1 5537267 D 675635 CDS YP_004335169.1 331698930 10367030 complement(5538316..5541174) 1 NC_015312.1 SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; TIGRFAM: SecA protein; KEGG: svi:Svir_30890 preprotein translocase subunit SecA; HAMAP: SecA protein; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; protein translocase subunit secA 5541174 10367030 Psed_5179 Pseudonocardia dioxanivorans CB1190 protein translocase subunit secA YP_004335169.1 5538316 R 675635 CDS YP_004335170.1 331698931 10367031 complement(5541381..5542079) 1 NC_015312.1 KEGG: ami:Amir_6306 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA 5542079 10367031 Psed_5180 Pseudonocardia dioxanivorans CB1190 sigma 54 modulation protein/ribosomal protein S30EA YP_004335170.1 5541381 R 675635 CDS YP_004335171.1 331698932 10367032 complement(5542408..5543211) 1 NC_015312.1 PFAM: Phosphoribosyltransferase; KEGG: nml:Namu_1364 phosphoribosyltransferase; phosphoribosyltransferase 5543211 10367032 Psed_5181 Pseudonocardia dioxanivorans CB1190 phosphoribosyltransferase YP_004335171.1 5542408 R 675635 CDS YP_004335172.1 331698933 10367033 complement(5543325..5545037) 1 NC_015312.1 KEGG: amd:AMED_7991 lipoprotein; PFAM: Lipoprotein LpqB, beta-propeller domain, C-terminal; GerMN domain; SMART: GerMN domain; Lipoprotein LpqB, beta-propeller domain-containing protein 5545037 10367033 Psed_5182 Pseudonocardia dioxanivorans CB1190 Lipoprotein LpqB, beta-propeller domain-containing protein YP_004335172.1 5543325 R 675635 CDS YP_004335173.1 331698934 10367034 complement(5545388..5547178) 1 NC_015312.1 KEGG: ami:Amir_6309 histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 5547178 10367034 Psed_5183 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335173.1 5545388 R 675635 CDS YP_004335174.1 331698935 10367035 complement(5547528..5548205) 1 NC_015312.1 KEGG: ami:Amir_6310 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5548205 10367035 Psed_5184 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335174.1 5547528 R 675635 CDS YP_004335175.1 331698936 10367036 complement(5548255..5548899) 1 NC_015312.1 PFAM: Thymidylate kinase; KEGG: amd:AMED_7999 dTMP kinase; thymidylate kinase 5548899 10367036 Psed_5185 Pseudonocardia dioxanivorans CB1190 thymidylate kinase YP_004335175.1 5548255 R 675635 CDS YP_004335176.1 331698937 10367037 complement(5548911..5549396) 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: sro:Sros_0188 hypothetical protein; NUDIX hydrolase 5549396 10367037 Psed_5186 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004335176.1 5548911 R 675635 CDS YP_004335177.1 331698938 10367038 complement(5549410..5550921) 1 NC_015312.1 PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding; TIGRFAM: Adenosylhomocysteinase; HAMAP: Adenosylhomocysteinase; KEGG: amd:AMED_8006 adenosylhomocysteinase; adenosylhomocysteinase 5550921 10367038 Psed_5187 Pseudonocardia dioxanivorans CB1190 adenosylhomocysteinase YP_004335177.1 5549410 R 675635 CDS YP_004335178.1 331698939 10367039 complement(5551360..5552652) 1 NC_015312.1 KEGG: mil:ML5_5270 hypothetical protein; hypothetical protein 5552652 10367039 Psed_5188 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335178.1 5551360 R 675635 CDS YP_004335179.1 331698940 10367040 5552805..5554448 1 NC_015312.1 KEGG: mva:Mvan_0905 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 5554448 10367040 Psed_5189 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004335179.1 5552805 D 675635 CDS YP_004335180.1 331698941 10367041 5554567..5555181 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_5224 TetR family transcriptional regulator; TetR family transcriptional regulator 5555181 10367041 Psed_5190 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335180.1 5554567 D 675635 CDS YP_004335181.1 331698942 10367042 5555178..5556449 1 NC_015312.1 KEGG: fre:Franean1_5223 glycosyl transferase protein; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; MGT family glycosyltransferase 5556449 10367042 Psed_5191 Pseudonocardia dioxanivorans CB1190 MGT family glycosyltransferase YP_004335181.1 5555178 D 675635 CDS YP_004335182.1 331698943 10367043 5556600..5557670 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: kfl:Kfla_0865 hypothetical protein; hypothetical protein 5557670 10367043 Psed_5192 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335182.1 5556600 D 675635 CDS YP_004335183.1 331698944 10367044 complement(5557680..5559209) 1 NC_015312.1 PFAM: Amino acid permease domain; KEGG: ami:Amir_6322 amino acid permease-associated region; amino acid permease 5559209 10367044 Psed_5193 Pseudonocardia dioxanivorans CB1190 amino acid permease YP_004335183.1 5557680 R 675635 CDS YP_004335184.1 331698945 10367045 complement(5559986..5560135) 1 NC_015312.1 hypothetical protein 5560135 10367045 Psed_5194 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335184.1 5559986 R 675635 CDS YP_004335185.1 331698946 10367046 complement(5560135..5561250) 1 NC_015312.1 TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: mkm:Mkms_2150 L-alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal; alanine dehydrogenase 5561250 10367046 Psed_5195 Pseudonocardia dioxanivorans CB1190 alanine dehydrogenase YP_004335185.1 5560135 R 675635 CDS YP_004335186.1 331698947 10367047 5561348..5561857 1 NC_015312.1 KEGG: mab:MAB_3099c AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 5561857 10367047 Psed_5196 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004335186.1 5561348 D 675635 CDS YP_004335187.1 331698948 10367048 complement(5561870..5562799) 1 NC_015312.1 KEGG: amd:AMED_8010 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 5562799 10367048 Psed_5197 Pseudonocardia dioxanivorans CB1190 cation diffusion facilitator family transporter YP_004335187.1 5561870 R 675635 CDS YP_004335188.1 331698949 10367049 complement(5562888..5564105) 1 NC_015312.1 TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: svi:Svir_30990 mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type I; mannose-6-phosphate isomerase 5564105 10367049 Psed_5198 Pseudonocardia dioxanivorans CB1190 mannose-6-phosphate isomerase YP_004335188.1 5562888 R 675635 CDS YP_004335189.1 331698950 10367050 complement(5564155..5565261) 1 NC_015312.1 KEGG: sen:SACE_6458 hypothetical protein; hypothetical protein 5565261 10367050 Psed_5199 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335189.1 5564155 R 675635 CDS YP_004335190.1 331698951 10367051 complement(5565248..5565463) 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0434/Trm112; KEGG: amd:AMED_8014 hypothetical protein; hypothetical protein 5565463 10367051 Psed_5200 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335190.1 5565248 R 675635 CDS YP_004335191.1 331698952 10367052 complement(5565638..5566993) 1 NC_015312.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: ami:Amir_6327 phosphomannomutase/phosphoglucomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 5566993 10367052 Psed_5201 Pseudonocardia dioxanivorans CB1190 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_004335191.1 5565638 R 675635 CDS YP_004335192.1 331698953 10367053 complement(5567077..5567439) 1 NC_015312.1 manually curated; KEGG: svi:Svir_31030 hypothetical protein; hypothetical protein 5567439 10367053 Psed_5202 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335192.1 5567077 R 675635 CDS YP_004335193.1 331698954 10367054 5567528..5568007 1 NC_015312.1 manually curated; KEGG: svi:Svir_31040 hypothetical protein; hypothetical protein 5568007 10367054 Psed_5203 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335193.1 5567528 D 675635 CDS YP_004335194.1 331698955 10367055 complement(5568332..5568667) 1 NC_015312.1 PFAM: Transcription factor WhiB; KEGG: nml:Namu_4172 transcription factor WhiB; transcription factor WhiB 5568667 10367055 Psed_5204 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004335194.1 5568332 R 675635 CDS YP_004335195.1 331698956 10367056 5568825..5569577 1 NC_015312.1 PFAM: Peptidase M50; KEGG: sen:SACE_6465 peptidase M50; peptidase M50 5569577 10367056 Psed_5205 Pseudonocardia dioxanivorans CB1190 peptidase M50 YP_004335195.1 5568825 D 675635 CDS YP_004335196.1 331698957 10367057 complement(5569550..5570110) 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_6335 NUDIX hydrolase; NUDIX hydrolase 5570110 10367057 Psed_5206 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004335196.1 5569550 R 675635 CDS YP_004335197.1 331698958 10367058 complement(5570104..5571468) 1 NC_015312.1 TIGRFAM: F420-0:gamma-glutamyl ligase; Coenzyme F420 biosynthesis protein FbiB, C-terminal; HAMAP: F420-0:gamma-glutamyl ligase; KEGG: nfa:nfa46200 F420-0--gamma-glutamyl ligase; PFAM: F420-0 gamma-glutamyl ligase-related; Nitroreductase-like; F420-0:gamma-glutamyl ligase 5571468 10367058 Psed_5207 Pseudonocardia dioxanivorans CB1190 F420-0:gamma-glutamyl ligase YP_004335197.1 5570104 R 675635 CDS YP_004335198.1 331698959 10367059 complement(5571461..5572468) 1 NC_015312.1 TIGRFAM: LPPG:Fo 2-phospho-L-lactate transferase; HAMAP: LPPG:FO 2-phospho-L-lactate transferase; KEGG: sen:SACE_6466 LPPG:FO 2-phospho-L-lactate transferase; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; LPPG:FO 2-phospho-L-lactate transferase 5572468 10367059 Psed_5208 Pseudonocardia dioxanivorans CB1190 LPPG:FO 2-phospho-L-lactate transferase YP_004335198.1 5571461 R 675635 CDS YP_004335199.1 331698960 10367060 complement(5572524..5573051) 1 NC_015312.1 KEGG: tpr:Tpau_3617 peroxiredoxin; PFAM: Glutathione peroxidase; peroxiredoxin 5573051 10367060 Psed_5209 Pseudonocardia dioxanivorans CB1190 peroxiredoxin YP_004335199.1 5572524 R 675635 CDS YP_004335200.1 331698961 10367061 complement(5573128..5574045) 1 NC_015312.1 KEGG: svi:Svir_06190 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; 3-methyl-adenine DNA glycosylase 5574045 10367061 Psed_5210 Pseudonocardia dioxanivorans CB1190 3-methyl-adenine DNA glycosylase YP_004335200.1 5573128 R 675635 CDS YP_004335201.1 331698962 10367062 complement(5574049..5575167) 1 NC_015312.1 KEGG: tpr:Tpau_1064 nucleotidyl transferase; PFAM: Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase 5575167 10367062 Psed_5211 Pseudonocardia dioxanivorans CB1190 mannose-1-phosphate guanylyltransferase YP_004335201.1 5574049 R 675635 CDS YP_004335202.1 331698963 10367063 complement(5575164..5575919) 1 NC_015312.1 KEGG: svi:Svir_06160 predicted glycosyltransferase; glycosyltransferase 5575919 10367063 Psed_5212 Pseudonocardia dioxanivorans CB1190 glycosyltransferase YP_004335202.1 5575164 R 675635 CDS YP_004335203.1 331698964 10367064 complement(5576309..5577958) 1 NC_015312.1 KEGG: nda:Ndas_2630 Sel1 domain protein repeat-containing protein; hypothetical protein 5577958 10367064 Psed_5213 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335203.1 5576309 R 675635 CDS YP_004335204.1 331698965 10367065 complement(5578042..5578947) 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: tcu:Tcur_0625 glycosyl transferase 2 protein; family 2 glycosyl transferase 5578947 10367065 Psed_5214 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004335204.1 5578042 R 675635 CDS YP_004335205.1 331698966 10367066 5579078..5580703 1 NC_015312.1 KEGG: amd:AMED_7688 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 5580703 10367066 Psed_5215 Pseudonocardia dioxanivorans CB1190 cell envelope-related transcriptional attenuator YP_004335205.1 5579078 D 675635 CDS YP_004335206.1 331698967 10367067 5580732..5581448 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03089; KEGG: mgi:Mflv_4738 hypothetical protein; hypothetical protein 5581448 10367067 Psed_5216 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335206.1 5580732 D 675635 CDS YP_004335207.1 331698968 10367068 5581522..5582757 1 NC_015312.1 KEGG: sen:SACE_4356 threonine dehydratase; TIGRFAM: Threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase 5582757 10367068 Psed_5217 Pseudonocardia dioxanivorans CB1190 threonine dehydratase YP_004335207.1 5581522 D 675635 CDS YP_004335208.1 331698969 10367069 complement(5582798..5583673) 1 NC_015312.1 PFAM: Ribonuclease BN-related; KEGG: cwo:Cwoe_0752 ribonuclease BN; ribonuclease BN 5583673 10367069 Psed_5218 Pseudonocardia dioxanivorans CB1190 ribonuclease BN YP_004335208.1 5582798 R 675635 CDS YP_004335209.1 331698970 10367070 complement(5583673..5584842) 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0118; KEGG: rha:RHA1_ro04285 hypothetical protein; hypothetical protein 5584842 10367070 Psed_5219 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335209.1 5583673 R 675635 CDS YP_004335210.1 331698971 10367072 5585339..5586814 1 NC_015312.1 KEGG: sco:SCO5332 hypothetical protein; hypothetical protein 5586814 10367072 Psed_5221 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335210.1 5585339 D 675635 CDS YP_004335211.1 331698972 10367073 complement(5587250..5587957) 1 NC_015312.1 PFAM: Creatininase; KEGG: aau:AAur_pTC10048 creatinine amidohydrolase; creatininase 5587957 10367073 Psed_5222 Pseudonocardia dioxanivorans CB1190 creatininase YP_004335211.1 5587250 R 675635 CDS YP_004335212.1 331698973 10367074 complement(5587978..5589135) 1 NC_015312.1 KEGG: aau:AAur_pTC10047 sporulation-associated protein; sporulation-associated protein 5589135 10367074 Psed_5223 Pseudonocardia dioxanivorans CB1190 sporulation-associated protein YP_004335212.1 5587978 R 675635 CDS YP_004335213.1 331698974 10367075 5589338..5589664 1 NC_015312.1 KEGG: mau:Micau_5351 hypothetical protein; hypothetical protein 5589664 10367075 Psed_5224 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335213.1 5589338 D 675635 CDS YP_004335214.1 331698975 10367076 5589680..5590006 1 NC_015312.1 hypothetical protein 5590006 10367076 Psed_5225 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335214.1 5589680 D 675635 CDS YP_004335215.1 331698976 10367077 5590184..5590927 1 NC_015312.1 KEGG: kfl:Kfla_2083 hypothetical protein; hypothetical protein 5590927 10367077 Psed_5226 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335215.1 5590184 D 675635 CDS YP_004335216.1 331698977 10367078 5590971..5591810 1 NC_015312.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: mau:Micau_5353 cell division protein FtsK/SpoIIIE; DNA translocase FtsK 5591810 10367078 Psed_5227 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004335216.1 5590971 D 675635 CDS YP_004335217.1 331698978 10367079 5591879..5592064 1 NC_015312.1 hypothetical protein 5592064 10367079 Psed_5228 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335217.1 5591879 D 675635 CDS YP_004335218.1 331698979 10367080 5592061..5592402 1 NC_015312.1 KEGG: mau:Micau_5356 hypothetical protein; hypothetical protein 5592402 10367080 Psed_5229 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335218.1 5592061 D 675635 CDS YP_004335219.1 331698980 10367081 5592399..5592767 1 NC_015312.1 hypothetical protein 5592767 10367081 Psed_5230 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335219.1 5592399 D 675635 CDS YP_004335220.1 331698981 10367082 5592848..5593192 1 NC_015312.1 hypothetical protein 5593192 10367082 Psed_5231 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335220.1 5592848 D 675635 CDS YP_004335221.1 331698982 10367083 5593189..5594709 1 NC_015312.1 KEGG: kfl:Kfla_2092 hypothetical protein; hypothetical protein 5594709 10367083 Psed_5232 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335221.1 5593189 D 675635 CDS YP_004335222.1 331698983 10367084 5594738..5594917 1 NC_015312.1 KEGG: saq:Sare_3570 excisionase/Xis, DNA-binding; excisionase 5594917 10367084 Psed_5233 Pseudonocardia dioxanivorans CB1190 excisionase YP_004335222.1 5594738 D 675635 CDS YP_004335223.1 331698984 10367085 5594921..5596147 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: ami:Amir_6364 integrase protein; integrase protein 5596147 10367085 Psed_5234 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004335223.1 5594921 D 675635 CDS YP_004335224.1 331698985 10367086 complement(5596195..5597346) 1 NC_015312.1 KEGG: sen:SACE_3580 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 5597346 10367086 Psed_5235 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004335224.1 5596195 R 675635 CDS YP_004335225.1 331698986 10367087 5597392..5598159 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_3581 TetR family transcriptional regulator; TetR family transcriptional regulator 5598159 10367087 Psed_5236 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335225.1 5597392 D 675635 CDS YP_004335226.1 331698987 10367088 5598190..5598765 1 NC_015312.1 PFAM: Protein of unknown function DUF1801; KEGG: sti:Sthe_1180 hypothetical protein; hypothetical protein 5598765 10367088 Psed_5237 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335226.1 5598190 D 675635 CDS YP_004335227.1 331698988 10367089 complement(5598928..5599434) 1 NC_015312.1 TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: svi:Svir_06040 phosphoribosylaminoimidazole carboxylase, PurE protein; PFAM: Phosphoribosylaminoimidazole carboxylase, core; phosphoribosylaminoimidazole carboxylase catalytic subunit 5599434 10367089 Psed_5238 Pseudonocardia dioxanivorans CB1190 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_004335227.1 5598928 R 675635 CDS YP_004335228.1 331698989 10367090 complement(5599431..5600636) 1 NC_015312.1 TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ami:Amir_6368 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase ATPase subunit 5600636 10367090 Psed_5239 Pseudonocardia dioxanivorans CB1190 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_004335228.1 5599431 R 675635 CDS YP_004335229.1 331698990 10367091 5600941..5601456 1 NC_015312.1 PFAM: GtrA-like protein; KEGG: sen:SACE_6489 hypothetical protein; GtrA family protein 5601456 10367091 Psed_5240 Pseudonocardia dioxanivorans CB1190 GtrA family protein YP_004335229.1 5600941 D 675635 CDS YP_004335230.1 331698991 10367092 complement(5601517..5602788) 1 NC_015312.1 KEGG: sen:SACE_6490 sensor kinase, two-component system; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 5602788 10367092 Psed_5241 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335230.1 5601517 R 675635 CDS YP_004335231.1 331698992 10367093 complement(5602806..5603462) 1 NC_015312.1 KEGG: ami:Amir_6380 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5603462 10367093 Psed_5242 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335231.1 5602806 R 675635 CDS YP_004335232.1 331698993 10367094 5603545..5604324 1 NC_015312.1 KEGG: svi:Svir_05970 histidinol-phosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase, , inositol monophosphatase; PFAM: Inositol monophosphatase; histidinol-phosphate phosphatase 5604324 10367094 Psed_5243 Pseudonocardia dioxanivorans CB1190 histidinol-phosphate phosphatase YP_004335232.1 5603545 D 675635 CDS YP_004335233.1 331698994 10367095 5604377..5604823 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: sen:SACE_6497 MaoC-like dehydratase; acyl dehydratase MaoC 5604823 10367095 Psed_5244 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004335233.1 5604377 D 675635 CDS YP_004335234.1 331698995 10367096 complement(5605195..5605845) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mab:MAB_3312 TetR family transcriptional regulator; TetR family transcriptional regulator 5605845 10367096 Psed_5245 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335234.1 5605195 R 675635 CDS YP_004335235.1 331698996 10367097 5605963..5606511 1 NC_015312.1 KEGG: mab:MAB_3311c hypothetical protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein 5606511 10367097 Psed_5246 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335235.1 5605963 D 675635 CDS YP_004335236.1 331698997 10367098 5606608..5607432 1 NC_015312.1 KEGG: fri:FraEuI1c_4053 hypothetical protein; hypothetical protein 5607432 10367098 Psed_5247 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335236.1 5606608 D 675635 CDS YP_004335237.1 331698998 10367099 5607489..5608136 1 NC_015312.1 PFAM: Nitroreductase-like; KEGG: mab:MAB_3310c oxygen-insensitive NAD(P)H nitroreductase; nitroreductase 5608136 10367099 Psed_5248 Pseudonocardia dioxanivorans CB1190 nitroreductase YP_004335237.1 5607489 D 675635 CDS YP_004335238.1 331698999 10367100 5608181..5609098 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: fra:Francci3_2731 alcohol dehydrogenase GroES-like protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 5609098 10367100 Psed_5249 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004335238.1 5608181 D 675635 CDS YP_004335239.1 331699000 10367101 5609173..5609991 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fri:FraEuI1c_5524 major facilitator superfamily MFS_1; major facilitator superfamily protein 5609991 10367101 Psed_5250 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004335239.1 5609173 D 675635 CDS YP_004335240.1 331699001 10367102 complement(5610028..5610681) 1 NC_015312.1 PFAM: Protein of unknown function DUF1470; KEGG: amd:AMED_3547 hypothetical protein; hypothetical protein 5610681 10367102 Psed_5251 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335240.1 5610028 R 675635 CDS YP_004335241.1 331699002 10367105 5611310..5611756 1 NC_015312.1 KEGG: hha:Hhal_2401 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 5611756 10367105 Psed_5254 Pseudonocardia dioxanivorans CB1190 BadM/Rrf2 family transcriptional regulator YP_004335241.1 5611310 D 675635 CDS YP_004335242.1 331699003 10367106 5611828..5613165 1 NC_015312.1 KEGG: xau:Xaut_2682 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 5613165 10367106 Psed_5255 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004335242.1 5611828 D 675635 CDS YP_004335243.1 331699004 10367107 5613209..5614615 1 NC_015312.1 KEGG: gob:Gobs_2448 LytTr DNA-binding region; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; LytTr DNA-binding protein 5614615 10367107 Psed_5256 Pseudonocardia dioxanivorans CB1190 LytTr DNA-binding protein YP_004335243.1 5613209 D 675635 CDS YP_004335244.1 331699005 10367108 5614831..5616162 1 NC_015312.1 KEGG: xau:Xaut_2680 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; acyl-CoA dehydrogenase 5616162 10367108 Psed_5257 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004335244.1 5614831 D 675635 CDS YP_004335245.1 331699006 10367109 complement(5616255..5617190) 1 NC_015312.1 KEGG: svi:Svir_05920 hydroxymethylglutaryl-CoA lyase; PFAM: Pyruvate carboxyltransferase; Hydroxymethylglutaryl-CoA lyase 5617190 10367109 Psed_5258 Pseudonocardia dioxanivorans CB1190 Hydroxymethylglutaryl-CoA lyase YP_004335245.1 5616255 R 675635 CDS YP_004335246.1 331699007 10367110 complement(5617187..5617762) 1 NC_015312.1 PFAM: Domain of unknown function DUF304l; KEGG: sen:SACE_6500 membrane-flanked domain-containing protein; hypothetical protein 5617762 10367110 Psed_5259 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335246.1 5617187 R 675635 CDS YP_004335247.1 331699008 10367111 complement(5617774..5618613) 1 NC_015312.1 KEGG: mil:ML5_1093 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal; biotin-(acetyl-CoA carboxylase) ligase 5618613 10367111 Psed_5260 Pseudonocardia dioxanivorans CB1190 biotin-(acetyl-CoA carboxylase) ligase YP_004335247.1 5617774 R 675635 CDS YP_004335248.1 331699009 10367112 5618792..5620453 1 NC_015312.1 KEGG: svi:Svir_05890 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase; propionyl-CoA carboxylase 5620453 10367112 Psed_5261 Pseudonocardia dioxanivorans CB1190 propionyl-CoA carboxylase YP_004335248.1 5618792 D 675635 CDS YP_004335249.1 331699010 10367113 5620465..5620707 1 NC_015312.1 KEGG: tcu:Tcur_4131 hypothetical protein; hypothetical protein 5620707 10367113 Psed_5262 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335249.1 5620465 D 675635 CDS YP_004335250.1 331699011 10367114 5620943..5621572 1 NC_015312.1 TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: sen:SACE_6507 Maf-like protein; PFAM: Maf-like protein; Septum formation protein Maf 5621572 10367114 Psed_5263 Pseudonocardia dioxanivorans CB1190 Septum formation protein Maf YP_004335250.1 5620943 D 675635 CDS YP_004335251.1 331699012 10367115 5621616..5622518 1 NC_015312.1 PFAM: Rhodanese-like; KEGG: kra:Krad_3079 rhodanese domain protein; SMART: Rhodanese-like; thiosulfate sulfurtransferase 5622518 10367115 Psed_5264 Pseudonocardia dioxanivorans CB1190 thiosulfate sulfurtransferase YP_004335251.1 5621616 D 675635 CDS YP_004335252.1 331699013 10367116 5622511..5622957 1 NC_015312.1 PFAM: Fe-S metabolism associated SufE; KEGG: gbr:Gbro_1834 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 5622957 10367116 Psed_5265 Pseudonocardia dioxanivorans CB1190 Fe-S metabolism associated SufE YP_004335252.1 5622511 D 675635 CDS YP_004335253.1 331699014 10367117 5623065..5624018 1 NC_015312.1 KEGG: mau:Micau_4297 hypothetical protein; hypothetical protein 5624018 10367117 Psed_5266 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335253.1 5623065 D 675635 CDS YP_004335254.1 331699015 10367118 5623972..5624937 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0276; KEGG: mau:Micau_4298 hypothetical protein; hypothetical protein 5624937 10367118 Psed_5267 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335254.1 5623972 D 675635 CDS YP_004335255.1 331699016 10367119 5624934..5625380 1 NC_015312.1 KEGG: mau:Micau_4299 hypothetical protein; hypothetical protein 5625380 10367119 Psed_5268 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335255.1 5624934 D 675635 CDS YP_004335256.1 331699017 10367120 5625552..5627321 1 NC_015312.1 PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: mjl:Mjls_1325 carbamoyl-phosphate synthase L chain, ATP-binding; SMART: Biotin carboxylase, C-terminal; biotin carboxylase 5627321 10367120 Psed_5269 Pseudonocardia dioxanivorans CB1190 biotin carboxylase YP_004335256.1 5625552 D 675635 CDS YP_004335257.1 331699018 10367121 5627513..5627764 1 NC_015312.1 hypothetical protein 5627764 10367121 Psed_5270 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335257.1 5627513 D 675635 CDS YP_004335258.1 331699019 10367122 5627994..5628470 1 NC_015312.1 KEGG: bpr:GBP346_A4009 exonuclease; hypothetical protein 5628470 10367122 Psed_5271 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335258.1 5627994 D 675635 CDS YP_004335259.1 331699020 10367123 complement(5628530..5628898) 1 NC_015312.1 hypothetical protein 5628898 10367123 Psed_5272 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335259.1 5628530 R 675635 CDS YP_004335260.1 331699021 10367124 complement(5628987..5630390) 1 NC_015312.1 KEGG: ami:Amir_6404 flavoprotein disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 5630390 10367124 Psed_5273 Pseudonocardia dioxanivorans CB1190 dihydrolipoyl dehydrogenase YP_004335260.1 5628987 R 675635 CDS YP_004335261.1 331699022 10367125 5630514..5630963 1 NC_015312.1 PFAM: AIG2-like; KEGG: sen:SACE_6527 hypothetical protein; AIG2 family protein 5630963 10367125 Psed_5274 Pseudonocardia dioxanivorans CB1190 AIG2 family protein YP_004335261.1 5630514 D 675635 CDS YP_004335262.1 331699023 10367126 complement(5631064..5632815) 1 NC_015312.1 KEGG: ami:Amir_6396 carbamoyl-phosphate synthase L chain ATP-binding; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; SMART: Biotin carboxylase, C-terminal; carbamoyl-phosphate synthase L chain ATP-binding protein 5632815 10367126 Psed_5275 Pseudonocardia dioxanivorans CB1190 carbamoyl-phosphate synthase L chain ATP-binding protein YP_004335262.1 5631064 R 675635 CDS YP_004335263.1 331699024 10367127 complement(5632812..5633612) 1 NC_015312.1 KEGG: ddr:Deide_10010 citrate (pro-3S)-lyase beta chain (citrase); PFAM: Aldehyde-lyase domain; citryl-CoA lyase 5633612 10367127 Psed_5276 Pseudonocardia dioxanivorans CB1190 citryl-CoA lyase YP_004335263.1 5632812 R 675635 CDS YP_004335264.1 331699025 10367128 complement(5633609..5635135) 1 NC_015312.1 KEGG: afo:Afer_1346 propionyl-CoA carboxylase; PFAM: Carboxyl transferase; propionyl-CoA carboxylase 5635135 10367128 Psed_5277 Pseudonocardia dioxanivorans CB1190 propionyl-CoA carboxylase YP_004335264.1 5633609 R 675635 CDS YP_004335265.1 331699026 10367129 complement(5635132..5635593) 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: dge:Dgeo_1254 MaoC-like protein dehydratase; acyl dehydratase MaoC 5635593 10367129 Psed_5278 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004335265.1 5635132 R 675635 CDS YP_004335266.1 331699027 10367130 complement(5635633..5636418) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: bpt:Bpet1119 enoyl-CoA hydratase; enoyl-CoA hydratase 5636418 10367130 Psed_5279 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004335266.1 5635633 R 675635 CDS YP_004335267.1 331699028 10367131 complement(5636415..5638025) 1 NC_015312.1 KEGG: bxe:Bxe_A2757 crotonobetaine/carnitine-CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 5638025 10367131 Psed_5280 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004335267.1 5636415 R 675635 CDS YP_004335268.1 331699029 10367132 complement(5638031..5638474) 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: bts:Btus_1731 MaoC domain protein dehydratase; acyl dehydratase MaoC 5638474 10367132 Psed_5281 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004335268.1 5638031 R 675635 CDS YP_004335269.1 331699030 10367133 complement(5638482..5639825) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nfa:nfa24070 transporter; major facilitator superfamily protein 5639825 10367133 Psed_5282 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004335269.1 5638482 R 675635 CDS YP_004335270.1 331699031 10367134 5640031..5640639 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1887 TetR family transcriptional regulator; TetR family transcriptional regulator 5640639 10367134 Psed_5283 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335270.1 5640031 D 675635 CDS YP_004335271.1 331699032 10367135 5640879..5641697 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: hje:HacjB3_06555 arylesterase, non-heme chloride peroxidase; alpha/beta hydrolase 5641697 10367135 Psed_5284 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004335271.1 5640879 D 675635 CDS YP_004335272.1 331699033 10367136 complement(5641777..5643024) 1 NC_015312.1 TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: ami:Amir_6414 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase 5643024 10367136 Psed_5285 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004335272.1 5641777 R 675635 CDS YP_004335273.1 331699034 10367137 5643444..5645252 1 NC_015312.1 KEGG: amd:AMED_0912 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 5645252 10367137 Psed_5286 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004335273.1 5643444 D 675635 CDS YP_004335274.1 331699035 10367138 5645288..5646094 1 NC_015312.1 TIGRFAM: purine nucleotide phosphorylase; Inosine guanosine/xanthosine phosphorylase; KEGG: ami:Amir_6421 purine nucleotide phosphorylase; PFAM: Nucleoside phosphorylase domain; purine nucleotide phosphorylase 5646094 10367138 Psed_5287 Pseudonocardia dioxanivorans CB1190 purine nucleotide phosphorylase YP_004335274.1 5645288 D 675635 CDS YP_004335275.1 331699036 10367139 5646091..5647683 1 NC_015312.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; KEGG: ami:Amir_6422 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 5647683 10367139 Psed_5288 Pseudonocardia dioxanivorans CB1190 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004335275.1 5646091 D 675635 CDS YP_004335276.1 331699037 10367140 complement(5647693..5648424) 1 NC_015312.1 PFAM: Lipase, GDSL; KEGG: cfl:Cfla_0383 ricin B lectin; G-D-S-L family lipolytic protein 5648424 10367140 Psed_5289 Pseudonocardia dioxanivorans CB1190 G-D-S-L family lipolytic protein YP_004335276.1 5647693 R 675635 CDS YP_004335277.1 331699038 10367141 5648606..5649196 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_6428 transcriptional regulator, TetR family; TetR family transcriptional regulator 5649196 10367141 Psed_5290 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335277.1 5648606 D 675635 CDS YP_004335278.1 331699039 10367142 complement(5649209..5649832) 1 NC_015312.1 KEGG: mjl:Mjls_1267 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; uracil phosphoribosyltransferase 5649832 10367142 Psed_5291 Pseudonocardia dioxanivorans CB1190 uracil phosphoribosyltransferase YP_004335278.1 5649209 R 675635 CDS YP_004335279.1 331699040 10367143 complement(5649844..5650773) 1 NC_015312.1 KEGG: svi:Svir_01260 haloalkane dehalogenase; PFAM: Alpha/beta hydrolase fold-1; Haloalkane dehalogenase 5650773 10367143 Psed_5292 Pseudonocardia dioxanivorans CB1190 Haloalkane dehalogenase YP_004335279.1 5649844 R 675635 CDS YP_004335280.1 331699041 10367144 5651160..5651396 1 NC_015312.1 hypothetical protein 5651396 10367144 Psed_5293 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335280.1 5651160 D 675635 CDS YP_004335281.1 331699042 10367145 5651706..5652647 1 NC_015312.1 KEGG: bcv:Bcav_0227 hypothetical protein; hypothetical protein 5652647 10367145 Psed_5294 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335281.1 5651706 D 675635 CDS YP_004335282.1 331699043 10367146 5652701..5654023 1 NC_015312.1 KEGG: svi:Svir_05470 hypothetical protein; hypothetical protein 5654023 10367146 Psed_5295 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335282.1 5652701 D 675635 CDS YP_004335283.1 331699044 10367147 complement(5654054..5655208) 1 NC_015312.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: sna:Snas_1362 adenosine deaminase; adenosine deaminase 5655208 10367147 Psed_5296 Pseudonocardia dioxanivorans CB1190 adenosine deaminase YP_004335283.1 5654054 R 675635 CDS YP_004335284.1 331699045 10367148 5655291..5656367 1 NC_015312.1 KEGG: ami:Amir_6447 hypothetical protein; hypothetical protein 5656367 10367148 Psed_5297 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335284.1 5655291 D 675635 CDS YP_004335285.1 331699046 10367149 complement(5656616..5658637) 1 NC_015312.1 KEGG: amd:AMED_2893 MviN-like protein; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN 5658637 10367149 Psed_5298 Pseudonocardia dioxanivorans CB1190 integral membrane protein MviN YP_004335285.1 5656616 R 675635 CDS YP_004335286.1 331699047 10367150 5660082..5660567 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: rop:ROP_38140 hypothetical protein; polyketide cyclase/dehydrase 5660567 10367150 Psed_5299 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004335286.1 5660082 D 675635 CDS YP_004335287.1 331699048 10367151 5660610..5661845 1 NC_015312.1 KEGG: rer:RER_20120 D-alanyl-D-alanine carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; serine-type D-Ala-D-Ala carboxypeptidase 5661845 10367151 Psed_5300 Pseudonocardia dioxanivorans CB1190 serine-type D-Ala-D-Ala carboxypeptidase YP_004335287.1 5660610 D 675635 CDS YP_004335288.1 331699049 10367152 complement(5661852..5662919) 1 NC_015312.1 KEGG: ami:Amir_6469 ribonuclease; TIGRFAM: Conserved hypothetical protein CHP00766, YhjD; Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease 5662919 10367152 Psed_5301 Pseudonocardia dioxanivorans CB1190 ribonuclease YP_004335288.1 5661852 R 675635 CDS YP_004335289.1 331699050 10367153 complement(5662930..5663955) 1 NC_015312.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: req:REQ_34370 tryptophan-tRNA synthetase trps; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 5663955 10367153 Psed_5302 Pseudonocardia dioxanivorans CB1190 tryptophanyl-tRNA synthetase YP_004335289.1 5662930 R 675635 CDS YP_004335290.1 331699051 10367154 5664058..5665509 1 NC_015312.1 KEGG: sro:Sros_1535 9-cis-epoxycarotenoid dioxygenase; PFAM: Carotenoid oxygenase; 9-cis-epoxycarotenoid dioxygenase 5665509 10367154 Psed_5303 Pseudonocardia dioxanivorans CB1190 9-cis-epoxycarotenoid dioxygenase YP_004335290.1 5664058 D 675635 CDS YP_004335291.1 331699052 10367155 5665550..5667181 1 NC_015312.1 KEGG: sro:Sros_1545 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5667181 10367155 Psed_5304 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004335291.1 5665550 D 675635 CDS YP_004335292.1 331699053 10367156 5667178..5668140 1 NC_015312.1 KEGG: sro:Sros_1533 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; TIGRFAM: F420-dependent oxidoreductase, Rv3093c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 5668140 10367156 Psed_5305 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004335292.1 5667178 D 675635 CDS YP_004335293.1 331699054 10367157 complement(5668214..5668408) 1 NC_015312.1 hypothetical protein 5668408 10367157 Psed_5306 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335293.1 5668214 R 675635 CDS YP_004335294.1 331699055 10367158 complement(5668462..5671062) 1 NC_015312.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: FO synthase, subunit 1; Complex F420, CofH; FO synthase, subunit 2; KEGG: sen:SACE_6594 FO synthase; HAMAP: FO synthase subunit 2; FO synthase, subunit 1; PFAM: Radical SAM; FO synthase subunit 2 5671062 10367158 Psed_5307 Pseudonocardia dioxanivorans CB1190 FO synthase subunit 2 YP_004335294.1 5668462 R 675635 CDS YP_004335295.1 331699056 10367159 complement(5671428..5671931) 1 NC_015312.1 PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: mil:ML5_3805 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 5671931 10367159 Psed_5308 Pseudonocardia dioxanivorans CB1190 prolyl-tRNA synthetase YP_004335295.1 5671428 R 675635 CDS YP_004335296.1 331699057 10367160 complement(5671949..5673370) 1 NC_015312.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: sen:SACE_5901 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 5673370 10367160 Psed_5309 Pseudonocardia dioxanivorans CB1190 serine/threonine protein kinase YP_004335296.1 5671949 R 675635 CDS YP_004335297.1 331699058 10367161 complement(5673367..5674173) 1 NC_015312.1 TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: ami:Amir_6475 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 5674173 10367161 Psed_5310 Pseudonocardia dioxanivorans CB1190 exodeoxyribonuclease III YP_004335297.1 5673367 R 675635 CDS YP_004335298.1 331699059 10367162 complement(5674217..5674558) 1 NC_015312.1 KEGG: ami:Amir_6477 hypothetical protein; hypothetical protein 5674558 10367162 Psed_5311 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335298.1 5674217 R 675635 CDS YP_004335299.1 331699060 10367163 complement(5674702..5675916) 1 NC_015312.1 KEGG: gob:Gobs_4413 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, eukaryotic; PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 5675916 10367163 Psed_5312 Pseudonocardia dioxanivorans CB1190 isocitrate dehydrogenase YP_004335299.1 5674702 R 675635 CDS YP_004335300.1 331699061 10367164 complement(5676016..5676312) 1 NC_015312.1 KEGG: ami:Amir_6499 hypothetical protein; hypothetical protein 5676312 10367164 Psed_5313 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335300.1 5676016 R 675635 CDS YP_004335301.1 331699062 10367165 complement(5676321..5677187) 1 NC_015312.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: sen:SACE_6651 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD 5677187 10367165 Psed_5314 Pseudonocardia dioxanivorans CB1190 bifunctional protein folD YP_004335301.1 5676321 R 675635 CDS YP_004335302.1 331699063 10367166 complement(5677364..5677981) 1 NC_015312.1 PFAM: Pentapeptide repeat; KEGG: sen:SACE_6655 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein 5677981 10367166 Psed_5315 Pseudonocardia dioxanivorans CB1190 pentapeptide repeat-containing protein YP_004335302.1 5677364 R 675635 CDS YP_004335303.1 331699064 10367167 5678208..5678849 1 NC_015312.1 KEGG: fra:Francci3_1993 hypothetical protein; hypothetical protein 5678849 10367167 Psed_5316 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335303.1 5678208 D 675635 CDS YP_004335304.1 331699065 10367168 complement(5678936..5682364) 1 NC_015312.1 KEGG: sen:SACE_6660 error-prone DNA polymerase; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: DNA polymerase III, alpha subunit; HAMAP: DNA polymerase, error-prone; SMART: Polymerase/histidinol phosphatase, N-terminal; error-prone DNA polymerase 5682364 10367168 Psed_5317 Pseudonocardia dioxanivorans CB1190 error-prone DNA polymerase YP_004335304.1 5678936 R 675635 CDS YP_004335305.1 331699066 10367169 complement(5682417..5683895) 1 NC_015312.1 KEGG: amd:AMED_4174 major facilitator transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 5683895 10367169 Psed_5318 Pseudonocardia dioxanivorans CB1190 EmrB/QacA subfamily drug resistance transporter YP_004335305.1 5682417 R 675635 CDS YP_004335306.1 331699067 10367170 5684056..5684637 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bte:BTH_I2940 TetR family transcriptional regulator; TetR family transcriptional regulator 5684637 10367170 Psed_5319 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335306.1 5684056 D 675635 CDS YP_004335307.1 331699068 10367171 complement(5684657..5685007) 1 NC_015312.1 KEGG: fri:FraEuI1c_4664 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 5685007 10367171 Psed_5320 Pseudonocardia dioxanivorans CB1190 thioredoxin YP_004335307.1 5684657 R 675635 CDS YP_004335308.1 331699069 10367172 complement(5685091..5685471) 1 NC_015312.1 KEGG: sma:SAV_2809 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 5685471 10367172 Psed_5321 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004335308.1 5685091 R 675635 CDS YP_004335309.1 331699070 10367173 complement(5685553..5686800) 1 NC_015312.1 KEGG: fal:FRAAL4104 FMN-dependent lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase 5686800 10367173 Psed_5322 Pseudonocardia dioxanivorans CB1190 (S)-2-hydroxy-acid oxidase YP_004335309.1 5685553 R 675635 CDS YP_004335310.1 331699071 10367174 complement(5686891..5689098) 1 NC_015312.1 KEGG: sen:SACE_6661 DNA-directed DNA polymerase; hypothetical protein 5689098 10367174 Psed_5323 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335310.1 5686891 R 675635 CDS YP_004335311.1 331699072 10367175 complement(5689095..5689859) 1 NC_015312.1 KEGG: amd:AMED_0812 hypothetical protein; hypothetical protein 5689859 10367175 Psed_5324 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335311.1 5689095 R 675635 CDS YP_004335312.1 331699073 10367176 5690062..5691225 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: cfl:Cfla_0377 glycosyl transferase 2; family 2 glycosyl transferase 5691225 10367176 Psed_5325 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004335312.1 5690062 D 675635 CDS YP_004335313.1 331699074 10367177 5691230..5691412 1 NC_015312.1 hypothetical protein 5691412 10367177 Psed_5326 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335313.1 5691230 D 675635 CDS YP_004335314.1 331699075 10367178 complement(5691441..5693000) 1 NC_015312.1 KEGG: ami:Amir_6503 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: AICARFT/IMPCHase bienzyme; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5693000 10367178 Psed_5327 Pseudonocardia dioxanivorans CB1190 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004335314.1 5691441 R 675635 CDS YP_004335315.1 331699076 10367179 complement(5692997..5693638) 1 NC_015312.1 TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: nfa:nfa49870 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; phosphoribosylglycinamide formyltransferase 5693638 10367179 Psed_5328 Pseudonocardia dioxanivorans CB1190 phosphoribosylglycinamide formyltransferase YP_004335315.1 5692997 R 675635 CDS YP_004335316.1 331699077 10367180 complement(5693761..5695893) 1 NC_015312.1 KEGG: ami:Amir_6505 AAA ATPase containing von Willebrand factor type A (vWA) domain; ATPase AAA 5695893 10367180 Psed_5329 Pseudonocardia dioxanivorans CB1190 ATPase AAA YP_004335316.1 5693761 R 675635 CDS YP_004335317.1 331699078 10367181 complement(5695972..5696760) 1 NC_015312.1 KEGG: nfa:nfa49890 antigen 34 kDa family protein; antigen 34 kDa family protein 5696760 10367181 Psed_5330 Pseudonocardia dioxanivorans CB1190 antigen 34 kDa family protein YP_004335317.1 5695972 R 675635 CDS YP_004335318.1 331699079 10367182 complement(5696877..5697764) 1 NC_015312.1 SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: amd:AMED_0803 succinyl-CoA synthetase alpha subunit; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 5697764 10367182 Psed_5331 Pseudonocardia dioxanivorans CB1190 succinyl-CoA synthetase subunit alpha YP_004335318.1 5696877 R 675635 CDS YP_004335319.1 331699080 10367183 complement(5697767..5698939) 1 NC_015312.1 PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA synthetase, beta subunit; KEGG: amd:AMED_0802 succinyl-CoA synthetase beta subunit; succinyl-CoA ligase (ADP-forming) subunit beta 5698939 10367183 Psed_5332 Pseudonocardia dioxanivorans CB1190 succinyl-CoA ligase (ADP-forming) subunit beta YP_004335319.1 5697767 R 675635 CDS YP_004335320.1 331699081 10367184 5699186..5700142 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: kfl:Kfla_1265 lipase class 2; alpha/beta hydrolase 5700142 10367184 Psed_5333 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004335320.1 5699186 D 675635 CDS YP_004335321.1 331699082 10367185 5700510..5701262 1 NC_015312.1 PFAM: Peptidase M23; KEGG: rop:ROP_pROB01-02760 peptidase M23 family protein; peptidase M23 5701262 10367185 Psed_5334 Pseudonocardia dioxanivorans CB1190 peptidase M23 YP_004335321.1 5700510 D 675635 CDS YP_004335322.1 331699083 10367186 complement(5701287..5703689) 1 NC_015312.1 KEGG: sen:SACE_6681 ATP-dependent DNA helicase; TIGRFAM: DNA helicase, ATP-dependent, PcrA type; PFAM: DNA helicase, UvrD/REP type; ATP-dependent DNA helicase PcrA 5703689 10367186 Psed_5335 Pseudonocardia dioxanivorans CB1190 ATP-dependent DNA helicase PcrA YP_004335322.1 5701287 R 675635 CDS YP_004335323.1 331699084 10367187 5703909..5704193 1 NC_015312.1 TIGRFAM: Chorismate mutase, high GC Gram-positive bacteria/archaeal; PFAM: Chorismate mutase, type II; KEGG: sen:SACE_6683 chorismate mutase; SMART: Chorismate mutase; chorismate mutase 5704193 10367187 Psed_5336 Pseudonocardia dioxanivorans CB1190 chorismate mutase YP_004335323.1 5703909 D 675635 CDS YP_004335324.1 331699085 10367188 5704251..5704574 1 NC_015312.1 KEGG: amd:AMED_0795 hypothetical protein; hypothetical protein 5704574 10367188 Psed_5337 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335324.1 5704251 D 675635 CDS YP_004335325.1 331699086 10367189 5705202..5706365 1 NC_015312.1 KEGG: rci:RRC34 hypothetical protein; hypothetical protein 5706365 10367189 Psed_5338 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335325.1 5705202 D 675635 CDS YP_004335326.1 331699087 10367190 5706833..5708479 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 5708479 10367190 Psed_5339 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004335326.1 5706833 D 675635 CDS YP_004335327.1 331699088 10367191 5708476..5709267 1 NC_015312.1 KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 5709267 10367191 Psed_5340 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004335327.1 5708476 D 675635 CDS YP_004335328.1 331699089 10367192 complement(5709936..5710619) 1 NC_015312.1 KEGG: ami:Amir_6525 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 5710619 10367192 Psed_5341 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335328.1 5709936 R 675635 CDS YP_004335329.1 331699090 10367193 complement(5710616..5712004) 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; Phage shock domain; KEGG: amd:AMED_0787 two-component system sensor kinase; signal transduction histidine kinase 5712004 10367193 Psed_5342 Pseudonocardia dioxanivorans CB1190 signal transduction histidine kinase YP_004335329.1 5710616 R 675635 CDS YP_004335330.1 331699091 10367194 5712164..5713492 1 NC_015312.1 PFAM: Phage shock domain; KEGG: sen:SACE_6696 hypothetical protein; PspC domain-containing protein 5713492 10367194 Psed_5343 Pseudonocardia dioxanivorans CB1190 PspC domain-containing protein YP_004335330.1 5712164 D 675635 CDS YP_004335331.1 331699092 10367195 5713485..5713718 1 NC_015312.1 hypothetical protein 5713718 10367195 Psed_5344 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335331.1 5713485 D 675635 CDS YP_004335332.1 331699093 10367196 complement(5713851..5714780) 1 NC_015312.1 PFAM: Methylenetetrahydrofolate reductase; KEGG: adg:Adeg_0345 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 5714780 10367196 Psed_5345 Pseudonocardia dioxanivorans CB1190 methylenetetrahydrofolate reductase YP_004335332.1 5713851 R 675635 CDS YP_004335333.1 331699094 10367197 complement(5714823..5716403) 1 NC_015312.1 PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase; KEGG: sen:SACE_6701 GMP synthase; GMP synthase 5716403 10367197 Psed_5346 Pseudonocardia dioxanivorans CB1190 GMP synthase YP_004335333.1 5714823 R 675635 CDS YP_004335334.1 331699095 10367198 5716615..5717073 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: scb:SCAB_86191 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 5717073 10367198 Psed_5347 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004335334.1 5716615 D 675635 CDS YP_004335335.1 331699096 10367199 complement(5717126..5717506) 1 NC_015312.1 KEGG: mav:MAV_3971 death-on-curing protein; TIGRFAM: Death-on-curing protein; PFAM: Filamentation induced by cAMP/death on curing-related; death-on-curing family protein 5717506 10367199 Psed_5348 Pseudonocardia dioxanivorans CB1190 death-on-curing family protein YP_004335335.1 5717126 R 675635 CDS YP_004335336.1 331699097 10367200 complement(5717520..5717726) 1 NC_015312.1 PFAM: CopG-like DNA-binding; KEGG: fre:Franean1_5368 hypothetical protein; CopG family transcriptional regulator 5717726 10367200 Psed_5349 Pseudonocardia dioxanivorans CB1190 CopG family transcriptional regulator YP_004335336.1 5717520 R 675635 CDS YP_004335337.1 331699098 10367201 complement(5717768..5718892) 1 NC_015312.1 manually curated; TIGRFAM: IMP dehydrogenase-related 2; KEGG: sen:SACE_6707 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; IMP dehydrogenase 5718892 10367201 Psed_5350 Pseudonocardia dioxanivorans CB1190 IMP dehydrogenase YP_004335337.1 5717768 R 675635 CDS YP_004335338.1 331699099 10367202 complement(5718999..5720504) 1 NC_015312.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: svi:Svir_04740 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase 5720504 10367202 Psed_5351 Pseudonocardia dioxanivorans CB1190 inosine-5'-monophosphate dehydrogenase YP_004335338.1 5718999 R 675635 CDS YP_004335339.1 331699100 10367203 5720685..5721065 1 NC_015312.1 KEGG: ami:Amir_6536 hypothetical protein; hypothetical protein 5721065 10367203 Psed_5352 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335339.1 5720685 D 675635 CDS YP_004335340.1 331699101 10367204 complement(5721345..5722592) 1 NC_015312.1 KEGG: amd:AMED_0769 hypothetical protein; hypothetical protein 5722592 10367204 Psed_5353 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335340.1 5721345 R 675635 CDS YP_004335341.1 331699102 10367205 complement(5722593..5723165) 1 NC_015312.1 manually curated; TIGRFAM: RNA polymerase sigma-70; KEGG: svi:Svir_04710 RNA polymerase sigma factor, sigma-70 family; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 5723165 10367205 Psed_5354 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004335341.1 5722593 R 675635 CDS YP_004335342.1 331699103 10367206 complement(5724297..5724893) 1 NC_015312.1 KEGG: ami:Amir_6539 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 5724893 10367206 Psed_5355 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335342.1 5724297 R 675635 CDS YP_004335343.1 331699104 10367207 complement(5725060..5726247) 1 NC_015312.1 KEGG: req:REQ_34970 hypothetical protein; hypothetical protein 5726247 10367207 Psed_5356 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335343.1 5725060 R 675635 CDS YP_004335344.1 331699105 10367208 complement(5726250..5727347) 1 NC_015312.1 KEGG: ami:Amir_6541 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 5727347 10367208 Psed_5357 Pseudonocardia dioxanivorans CB1190 regulatory protein MerR YP_004335344.1 5726250 R 675635 CDS YP_004335345.1 331699106 10367209 5727489..5727803 1 NC_015312.1 PFAM: Transcription factor WhiB; KEGG: ami:Amir_6542 transcription factor WhiB; transcription factor WhiB 5727803 10367209 Psed_5358 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004335345.1 5727489 D 675635 CDS YP_004335346.1 331699107 10367210 complement(5727925..5729547) 1 NC_015312.1 TIGRFAM: Chaperonin Cpn60; HAMAP: Chaperonin Cpn60; KEGG: ami:Amir_6543 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 5729547 10367210 Psed_5359 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroEL YP_004335346.1 5727925 R 675635 CDS YP_004335347.1 331699108 10367211 complement(5729667..5729957) 1 NC_015312.1 HAMAP: Chaperonin Cpn10; PFAM: Chaperonin Cpn10; KEGG: ami:Amir_6544 chaperonin Cpn10; SMART: Chaperonin Cpn10; molecular chaperone GroES 5729957 10367211 Psed_5360 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroES YP_004335347.1 5729667 R 675635 CDS YP_004335348.1 331699109 10367212 5730127..5730759 1 NC_015312.1 KEGG: gbr:Gbro_1246 pyrrolo-quinoline quinone beta-propeller repeat-containing protein; hypothetical protein 5730759 10367212 Psed_5361 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335348.1 5730127 D 675635 CDS YP_004335349.1 331699110 10367213 5730781..5731713 1 NC_015312.1 KEGG: sen:SACE_0624 aldo/keto reductase oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 5731713 10367213 Psed_5362 Pseudonocardia dioxanivorans CB1190 aryl-alcohol dehydrogenase YP_004335349.1 5730781 D 675635 CDS YP_004335350.1 331699111 10367214 complement(5731803..5732852) 1 NC_015312.1 PFAM: Peptidase M22, glycoprotease; TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; HAMAP: Peptidase M22, O-sialoglycoprotein peptidase; KEGG: svi:Svir_04650 O-sialoglycoprotein endopeptidase; O-sialoglycoprotein endopeptidase 5732852 10367214 Psed_5363 Pseudonocardia dioxanivorans CB1190 O-sialoglycoprotein endopeptidase YP_004335350.1 5731803 R 675635 CDS YP_004335351.1 331699112 10367215 complement(5732849..5733322) 1 NC_015312.1 KEGG: mav:MAV_4368 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; ribosomal-protein-alanine acetyltransferase 5733322 10367215 Psed_5364 Pseudonocardia dioxanivorans CB1190 ribosomal-protein-alanine acetyltransferase YP_004335351.1 5732849 R 675635 CDS YP_004335352.1 331699113 10367216 complement(5733319..5733993) 1 NC_015312.1 KEGG: ami:Amir_6548 peptidase M22 glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein 5733993 10367216 Psed_5365 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335352.1 5733319 R 675635 CDS YP_004335353.1 331699114 10367217 complement(5734017..5734727) 1 NC_015312.1 KEGG: nca:Noca_3196 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 5734727 10367217 Psed_5366 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004335353.1 5734017 R 675635 CDS YP_004335354.1 331699115 10367218 complement(5734724..5735206) 1 NC_015312.1 KEGG: req:REQ_35300 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein 5735206 10367218 Psed_5367 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335354.1 5734724 R 675635 CDS YP_004335355.1 331699116 10367219 complement(5735203..5736327) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: ami:Amir_6555 alpha/beta hydrolase fold protein; alpha/beta hydrolase 5736327 10367219 Psed_5368 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004335355.1 5735203 R 675635 CDS YP_004335356.1 331699117 10367220 complement(5736321..5737580) 1 NC_015312.1 PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: svi:Svir_04590 alanine racemase; alanine racemase 5737580 10367220 Psed_5369 Pseudonocardia dioxanivorans CB1190 alanine racemase YP_004335356.1 5736321 R 675635 CDS YP_004335357.1 331699118 10367221 complement(5737911..5739353) 1 NC_015312.1 KEGG: amd:AMED_0737 ribokinase; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; hypothetical protein 5739353 10367221 Psed_5370 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335357.1 5737911 R 675635 CDS YP_004335358.1 331699119 10367222 complement(5739424..5740167) 1 NC_015312.1 KEGG: mva:Mvan_3404 hypothetical protein; hypothetical protein 5740167 10367222 Psed_5371 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335358.1 5739424 R 675635 CDS YP_004335359.1 331699120 10367223 5740503..5741333 1 NC_015312.1 KEGG: ami:Amir_6559 dienelactone hydrolase-like protein; dienelactone hydrolase-like protein 5741333 10367223 Psed_5372 Pseudonocardia dioxanivorans CB1190 dienelactone hydrolase-like protein YP_004335359.1 5740503 D 675635 CDS YP_004335360.1 331699121 10367224 complement(5741343..5741699) 1 NC_015312.1 hypothetical protein 5741699 10367224 Psed_5373 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335360.1 5741343 R 675635 CDS YP_004335361.1 331699122 10367225 complement(5741696..5741968) 1 NC_015312.1 hypothetical protein 5741968 10367225 Psed_5374 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335361.1 5741696 R 675635 CDS YP_004335362.1 331699123 10367226 complement(5742043..5743380) 1 NC_015312.1 TIGRFAM: Phosphoglucosamine mutase; KEGG: amd:AMED_0728 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase 5743380 10367226 Psed_5375 Pseudonocardia dioxanivorans CB1190 phosphoglucosamine mutase YP_004335362.1 5742043 R 675635 CDS YP_004335363.1 331699124 10367227 complement(5743392..5743997) 1 NC_015312.1 PFAM: Ribosomal protein S9; KEGG: nml:Namu_1177 30S ribosomal protein S9; 30S ribosomal protein S9 5743997 10367227 Psed_5376 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S9 YP_004335363.1 5743392 R 675635 CDS YP_004335364.1 331699125 10367228 complement(5743994..5744437) 1 NC_015312.1 KEGG: amd:AMED_0726 large subunit ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 5744437 10367228 Psed_5377 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L13 YP_004335364.1 5743994 R 675635 CDS YP_004335365.1 331699126 10367229 complement(5744650..5744937) 1 NC_015312.1 KEGG: sen:SACE_6782 hypothetical protein; hypothetical protein 5744937 10367229 Psed_5378 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335365.1 5744650 R 675635 CDS YP_004335366.1 331699127 10367230 complement(5744948..5745259) 1 NC_015312.1 KEGG: ami:Amir_6567 protein of unknown function DUF909; hypothetical protein 5745259 10367230 Psed_5379 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335366.1 5744948 R 675635 CDS YP_004335367.1 331699128 10367231 complement(5745340..5745849) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gob:Gobs_4039 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 5745849 10367231 Psed_5380 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004335367.1 5745340 R 675635 CDS YP_004335368.1 331699129 10367232 complement(5745927..5747570) 1 NC_015312.1 KEGG: cfl:Cfla_2780 amidase; PFAM: Amidase; amidase 5747570 10367232 Psed_5381 Pseudonocardia dioxanivorans CB1190 amidase YP_004335368.1 5745927 R 675635 CDS YP_004335369.1 331699130 10367233 complement(5747567..5748727) 1 NC_015312.1 PFAM: Acetamidase/Formamidase; KEGG: cfl:Cfla_2779 acetamidase/formamidase; acetamidase/formamidase 5748727 10367233 Psed_5382 Pseudonocardia dioxanivorans CB1190 acetamidase/formamidase YP_004335369.1 5747567 R 675635 CDS YP_004335370.1 331699131 10367234 5749421..5750704 1 NC_015312.1 KEGG: bbt:BBta_2105 N-isopropylammelide isopropylaminohydrolase; PFAM: Amidohydrolase 3; cytosine deaminase 5750704 10367234 Psed_5383 Pseudonocardia dioxanivorans CB1190 cytosine deaminase YP_004335370.1 5749421 D 675635 CDS YP_004335371.1 331699132 10367235 5750814..5751818 1 NC_015312.1 KEGG: mpo:Mpop_4351 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; flavanone 3-dioxygenase 5751818 10367235 Psed_5384 Pseudonocardia dioxanivorans CB1190 flavanone 3-dioxygenase YP_004335371.1 5750814 D 675635 CDS YP_004335372.1 331699133 10367236 complement(5751686..5751946) 1 NC_015312.1 hypothetical protein 5751946 10367236 Psed_5385 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335372.1 5751686 R 675635 CDS YP_004335373.1 331699134 10367237 5751966..5752493 1 NC_015312.1 KEGG: fri:FraEuI1c_4980 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 5752493 10367237 Psed_5386 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004335373.1 5751966 D 675635 CDS YP_004335374.1 331699135 10367238 complement(5752509..5753717) 1 NC_015312.1 KEGG: ami:Amir_6569 heat shock protein 70; hypothetical protein 5753717 10367238 Psed_5387 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335374.1 5752509 R 675635 CDS YP_004335375.1 331699136 10367239 complement(5753720..5757625) 1 NC_015312.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: mau:Micau_5894 cell division protein FtsK/SpoIIIE; DNA translocase FtsK 5757625 10367239 Psed_5388 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004335375.1 5753720 R 675635 CDS YP_004335376.1 331699137 10367240 5757788..5759254 1 NC_015312.1 KEGG: sro:Sros_8100 hypothetical protein; TIGRFAM: Type VII secretion system protein EccD; PFAM: Type VII secretion system protein EccD; secretion protein snm4 5759254 10367240 Psed_5389 Pseudonocardia dioxanivorans CB1190 secretion protein snm4 YP_004335376.1 5757788 D 675635 CDS YP_004335377.1 331699138 10367241 5759251..5760426 1 NC_015312.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: tpr:Tpau_0863 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 5760426 10367241 Psed_5390 Pseudonocardia dioxanivorans CB1190 peptidase S8 and S53 subtilisin kexin sedolisin YP_004335377.1 5759251 D 675635 CDS YP_004335378.1 331699139 10367242 complement(5760643..5762007) 1 NC_015312.1 PFAM: Type VII secretion system protein EccB; KEGG: gbr:Gbro_3295 hypothetical protein; hypothetical protein 5762007 10367242 Psed_5391 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335378.1 5760643 R 675635 CDS YP_004335379.1 331699140 10367243 complement(5762068..5762742) 1 NC_015312.1 KEGG: sco:SCO1070 two component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5762742 10367243 Psed_5392 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335379.1 5762068 R 675635 CDS YP_004335380.1 331699141 10367244 complement(5762739..5764160) 1 NC_015312.1 KEGG: sco:SCO1071 two component system sensor kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 5764160 10367244 Psed_5393 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335380.1 5762739 R 675635 CDS YP_004335381.1 331699142 10367245 5764162..5764578 1 NC_015312.1 PFAM: Protein of unknown function DUF1707; KEGG: amd:AMED_0797 hypothetical protein; hypothetical protein 5764578 10367245 Psed_5394 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335381.1 5764162 D 675635 CDS YP_004335382.1 331699143 10367246 complement(5764667..5765458) 1 NC_015312.1 PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: tpr:Tpau_3380 tRNA pseudouridine synthase A; tRNA pseudouridine synthase A 5765458 10367246 Psed_5395 Pseudonocardia dioxanivorans CB1190 tRNA pseudouridine synthase A YP_004335382.1 5764667 R 675635 CDS YP_004335383.1 331699144 10367247 complement(5765527..5766264) 1 NC_015312.1 TIGRFAM: Ribosomal protein L17; HAMAP: Ribosomal protein L17; KEGG: tpr:Tpau_3381 ribosomal protein L17; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 5766264 10367247 Psed_5396 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L17 YP_004335383.1 5765527 R 675635 CDS YP_004335384.1 331699145 10367248 complement(5766267..5767310) 1 NC_015312.1 SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: ami:Amir_6583 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase subunit alpha 5767310 10367248 Psed_5397 Pseudonocardia dioxanivorans CB1190 DNA-directed RNA polymerase subunit alpha YP_004335384.1 5766267 R 675635 CDS YP_004335385.1 331699146 10367249 complement(5767413..5768018) 1 NC_015312.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; KEGG: sen:SACE_6804 30S ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 5768018 10367249 Psed_5398 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S4 YP_004335385.1 5767413 R 675635 CDS YP_004335386.1 331699147 10367250 complement(5768039..5768446) 1 NC_015312.1 KEGG: amd:AMED_0706 small subunit ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 5768446 10367250 Psed_5399 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S11 YP_004335386.1 5768039 R 675635 CDS YP_004335387.1 331699148 10367251 complement(5768446..5768826) 1 NC_015312.1 KEGG: rop:ROP_62120 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 5768826 10367251 Psed_5400 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S13 YP_004335387.1 5768446 R 675635 CDS YP_004335388.1 331699149 10367252 complement(5769001..5769114) 1 NC_015312.1 TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: ami:Amir_6587 ribosomal protein L36; PFAM: Ribosomal protein L36; 50S ribosomal protein L36 5769114 10367252 Psed_5401 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L36 YP_004335388.1 5769001 R 675635 CDS YP_004335389.1 331699150 10367253 complement(5769149..5769370) 1 NC_015312.1 TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: amd:AMED_0702 translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type; translation initiation factor IF-1 5769370 10367253 Psed_5402 Pseudonocardia dioxanivorans CB1190 translation initiation factor IF-1 YP_004335389.1 5769149 R 675635 CDS YP_004335390.1 331699151 10367255 complement(5770743..5772122) 1 NC_015312.1 KEGG: rha:RHA1_ro01581 NAD(P) transhydrogenase beta subunit; PFAM: NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase 5772122 10367255 Psed_5404 Pseudonocardia dioxanivorans CB1190 NAD(P)(+) transhydrogenase YP_004335390.1 5770743 R 675635 CDS YP_004335391.1 331699152 10367256 complement(5772119..5772469) 1 NC_015312.1 KEGG: rop:ROP_12850 nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB; nicotinamide nucleotide transhydrogenase subunit alpha 2 PntAB 5772469 10367256 Psed_5405 Pseudonocardia dioxanivorans CB1190 nicotinamide nucleotide transhydrogenase subunit alpha 2 PntAB YP_004335391.1 5772119 R 675635 CDS YP_004335392.1 331699153 10367257 complement(5772469..5773494) 1 NC_015312.1 KEGG: rop:ROP_12860 nicotinamide nucleotide transhydrogenase alpha subunit 1 PntAA; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; NAD(P)(+) transhydrogenase 5773494 10367257 Psed_5406 Pseudonocardia dioxanivorans CB1190 NAD(P)(+) transhydrogenase YP_004335392.1 5772469 R 675635 CDS YP_004335393.1 331699154 10367258 complement(5773762..5774586) 1 NC_015312.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: amd:AMED_0701 methionyl aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase 5774586 10367258 Psed_5407 Pseudonocardia dioxanivorans CB1190 methionine aminopeptidase YP_004335393.1 5773762 R 675635 CDS YP_004335394.1 331699155 10367259 complement(5774659..5775207) 1 NC_015312.1 TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: rha:RHA1_ro06154 adenylate kinase; PFAM: Adenylate kinase; adenylate kinase 5775207 10367259 Psed_5408 Pseudonocardia dioxanivorans CB1190 adenylate kinase YP_004335394.1 5774659 R 675635 CDS YP_004335395.1 331699156 10367260 complement(5775337..5776653) 1 NC_015312.1 KEGG: sen:SACE_6813 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY 5776653 10367260 Psed_5409 Pseudonocardia dioxanivorans CB1190 preprotein translocase subunit SecY YP_004335395.1 5775337 R 675635 CDS YP_004335396.1 331699157 10367261 complement(5776900..5777349) 1 NC_015312.1 TIGRFAM: Ribosomal protein L15, bacterial-type; KEGG: req:REQ_35670 50S ribosomal protein L15 RplO; 50S ribosomal protein L15 5777349 10367261 Psed_5410 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L15 YP_004335396.1 5776900 R 675635 CDS YP_004335397.1 331699158 10367262 complement(5777349..5777555) 1 NC_015312.1 KEGG: kra:Krad_0706 ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; 50S ribosomal protein L30 5777555 10367262 Psed_5411 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L30 YP_004335397.1 5777349 R 675635 CDS YP_004335398.1 331699159 10367263 complement(5777561..5778196) 1 NC_015312.1 KEGG: sen:SACE_6819 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal; 30S ribosomal protein S5 5778196 10367263 Psed_5412 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S5 YP_004335398.1 5777561 R 675635 CDS YP_004335399.1 331699160 10367264 complement(5778237..5778659) 1 NC_015312.1 KEGG: svi:Svir_04140 LSU ribosomal protein L18P; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 5778659 10367264 Psed_5413 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L18 YP_004335399.1 5778237 R 675635 CDS YP_004335400.1 331699161 10367265 complement(5778659..5779198) 1 NC_015312.1 KEGG: ami:Amir_6599 ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 5779198 10367265 Psed_5414 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L6 YP_004335400.1 5778659 R 675635 CDS YP_004335401.1 331699162 10367266 complement(5779215..5779613) 1 NC_015312.1 PFAM: Ribosomal protein S8; KEGG: ami:Amir_6600 ribosomal protein S8; 30S ribosomal protein S8 5779613 10367266 Psed_5415 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S8 YP_004335401.1 5779215 R 675635 CDS YP_004335402.1 331699163 10367267 complement(5779706..5779891) 1 NC_015312.1 PFAM: Ribosomal protein S14; KEGG: kra:Krad_0701 ribosomal protein S14; 30S ribosomal protein S14 5779891 10367267 Psed_5416 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S14 YP_004335402.1 5779706 R 675635 CDS YP_004335403.1 331699164 10367268 complement(5779898..5780461) 1 NC_015312.1 PFAM: Ribosomal protein L5; KEGG: ami:Amir_6602 ribosomal protein L5; 50S ribosomal protein L5 5780461 10367268 Psed_5417 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L5 YP_004335403.1 5779898 R 675635 CDS YP_004335404.1 331699165 10367269 complement(5780463..5780789) 1 NC_015312.1 TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: amd:AMED_0688 large subunit ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 5780789 10367269 Psed_5418 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L24 YP_004335404.1 5780463 R 675635 CDS YP_004335405.1 331699166 10367270 complement(5780792..5781160) 1 NC_015312.1 KEGG: ami:Amir_6604 ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 5781160 10367270 Psed_5419 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L14 YP_004335405.1 5780792 R 675635 CDS YP_004335406.1 331699167 10367271 complement(5781157..5781420) 1 NC_015312.1 KEGG: req:REQ_35770 30S ribosomal protein S17 RpsQ; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 5781420 10367271 Psed_5420 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S17 YP_004335406.1 5781157 R 675635 CDS YP_004335407.1 331699168 10367272 complement(5781417..5781659) 1 NC_015312.1 KEGG: ami:Amir_6606 ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 5781659 10367272 Psed_5421 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L29 YP_004335407.1 5781417 R 675635 CDS YP_004335408.1 331699169 10367273 complement(5781659..5782078) 1 NC_015312.1 TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: nml:Namu_1130 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 5782078 10367273 Psed_5422 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L16 YP_004335408.1 5781659 R 675635 CDS YP_004335409.1 331699170 10367274 complement(5782082..5782897) 1 NC_015312.1 TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: tpr:Tpau_3429 ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 5782897 10367274 Psed_5423 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S3 YP_004335409.1 5782082 R 675635 CDS YP_004335410.1 331699171 10367275 complement(5782897..5783328) 1 NC_015312.1 KEGG: amd:AMED_0682 large subunit ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 5783328 10367275 Psed_5424 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L22 YP_004335410.1 5782897 R 675635 CDS YP_004335411.1 331699172 10367276 complement(5783366..5783647) 1 NC_015312.1 KEGG: ami:Amir_6610 ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 5783647 10367276 Psed_5425 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S19 YP_004335411.1 5783366 R 675635 CDS YP_004335412.1 331699173 10367277 complement(5783664..5784497) 1 NC_015312.1 KEGG: sen:SACE_6833 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; 50S ribosomal protein L2 5784497 10367277 Psed_5426 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L2 YP_004335412.1 5783664 R 675635 CDS YP_004335413.1 331699174 10367278 complement(5784514..5784813) 1 NC_015312.1 PFAM: Ribosomal protein L25/L23; KEGG: svi:Svir_04000 50S ribosomal protein L23; 50S ribosomal protein L25 5784813 10367278 Psed_5427 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L25 YP_004335413.1 5784514 R 675635 CDS YP_004335414.1 331699175 10367279 complement(5784810..5785736) 1 NC_015312.1 PFAM: Ribosomal protein L4/L1e; KEGG: bfa:Bfae_23800 50S ribosomal protein L4; 50S ribosomal protein L4 5785736 10367279 Psed_5428 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L4 YP_004335414.1 5784810 R 675635 CDS YP_004335415.1 331699176 10367280 complement(5785736..5786389) 1 NC_015312.1 KEGG: ami:Amir_6614 ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 5786389 10367280 Psed_5429 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L3 YP_004335415.1 5785736 R 675635 CDS YP_004335416.1 331699177 10367281 complement(5786403..5786708) 1 NC_015312.1 TIGRFAM: Ribosomal protein S10 subgroup; HAMAP: Ribosomal protein S10 subgroup; KEGG: ami:Amir_6615 30S ribosomal protein S10; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 5786708 10367281 Psed_5430 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S10 YP_004335416.1 5786403 R 675635 CDS YP_004335417.1 331699178 10367282 complement(5787061..5788254) 1 NC_015312.1 TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; KEGG: sco:SCO4662 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 5788254 10367282 Psed_5431 Pseudonocardia dioxanivorans CB1190 translation elongation factor Tu YP_004335417.1 5787061 R 675635 CDS YP_004335418.1 331699179 10367283 complement(5788397..5790496) 1 NC_015312.1 TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; KEGG: ami:Amir_6617 translation elongation factor G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G 5790496 10367283 Psed_5432 Pseudonocardia dioxanivorans CB1190 translation elongation factor G YP_004335418.1 5788397 R 675635 CDS YP_004335419.1 331699180 10367284 complement(5790541..5791011) 1 NC_015312.1 KEGG: sen:SACE_6840 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 5791011 10367284 Psed_5433 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S7 YP_004335419.1 5790541 R 675635 CDS YP_004335420.1 331699181 10367285 complement(5791011..5791385) 1 NC_015312.1 KEGG: sen:SACE_6841 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 5791385 10367285 Psed_5434 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S12 YP_004335420.1 5791011 R 675635 CDS YP_004335421.1 331699182 10367286 complement(5792072..5795974) 1 NC_015312.1 SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: sen:SACE_6853 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase, subunit beta-prime; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; DNA-directed RNA polymerase subunit beta' 5795974 10367286 Psed_5435 Pseudonocardia dioxanivorans CB1190 DNA-directed RNA polymerase subunit beta' YP_004335421.1 5792072 R 675635 CDS YP_004335422.1 331699183 10367287 complement(5796017..5799544) 1 NC_015312.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; KEGG: sen:SACE_6854 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; DNA-directed RNA polymerase subunit beta 5799544 10367287 Psed_5436 Pseudonocardia dioxanivorans CB1190 DNA-directed RNA polymerase subunit beta YP_004335422.1 5796017 R 675635 CDS YP_004335423.1 331699184 10367288 5800485..5802173 1 NC_015312.1 KEGG: tcu:Tcur_1238 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 5802173 10367288 Psed_5437 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004335423.1 5800485 D 675635 CDS YP_004335424.1 331699185 10367289 complement(5802257..5802649) 1 NC_015312.1 TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: mav:MAV_4507 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 5802649 10367289 Psed_5438 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L7/L12 YP_004335424.1 5802257 R 675635 CDS YP_004335425.1 331699186 10367290 complement(5802713..5803288) 1 NC_015312.1 KEGG: rop:ROP_16540 50S ribosomal protein L10; HAMAP: Ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; 50S ribosomal protein L10 5803288 10367290 Psed_5439 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L10 YP_004335425.1 5802713 R 675635 CDS YP_004335426.1 331699187 10367291 complement(5803564..5804715) 1 NC_015312.1 KEGG: amd:AMED_1772 hypothetical protein; hypothetical protein 5804715 10367291 Psed_5440 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335426.1 5803564 R 675635 CDS YP_004335427.1 331699188 10367292 complement(5804774..5805355) 1 NC_015312.1 KEGG: sen:SACE_6857 hypothetical protein; hypothetical protein 5805355 10367292 Psed_5441 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335427.1 5804774 R 675635 CDS YP_004335428.1 331699189 10367293 complement(5805445..5806671) 1 NC_015312.1 KEGG: sen:SACE_6858 secreted protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein 5806671 10367293 Psed_5442 Pseudonocardia dioxanivorans CB1190 virulence factor Mce family protein YP_004335428.1 5805445 R 675635 CDS YP_004335429.1 331699190 10367294 complement(5806668..5807969) 1 NC_015312.1 KEGG: amd:AMED_1775 ABC transport system substrate-binding protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein 5807969 10367294 Psed_5443 Pseudonocardia dioxanivorans CB1190 virulence factor Mce family protein YP_004335429.1 5806668 R 675635 CDS YP_004335430.1 331699191 10367295 complement(5807966..5809297) 1 NC_015312.1 KEGG: sen:SACE_6860 MCE family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein 5809297 10367295 Psed_5444 Pseudonocardia dioxanivorans CB1190 virulence factor Mce family protein YP_004335430.1 5807966 R 675635 CDS YP_004335431.1 331699192 10367296 complement(5809299..5810264) 1 NC_015312.1 KEGG: svi:Svir_03740 virulence factor Mce family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein 5810264 10367296 Psed_5445 Pseudonocardia dioxanivorans CB1190 virulence factor Mce family protein YP_004335431.1 5809299 R 675635 CDS YP_004335432.1 331699193 10367297 complement(5810261..5811415) 1 NC_015312.1 KEGG: amd:AMED_0605 ABC transport system substrate-binding protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein 5811415 10367297 Psed_5446 Pseudonocardia dioxanivorans CB1190 virulence factor Mce family protein YP_004335432.1 5810261 R 675635 CDS YP_004335433.1 331699194 10367298 complement(5811412..5812788) 1 NC_015312.1 KEGG: sen:SACE_6863 Mce family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein 5812788 10367298 Psed_5447 Pseudonocardia dioxanivorans CB1190 virulence factor Mce family protein YP_004335433.1 5811412 R 675635 CDS YP_004335434.1 331699195 10367299 complement(5812785..5813627) 1 NC_015312.1 PFAM: Domain of unknown function DUF140; KEGG: req:REQ_36790 integral membrane protein yrbe4b; hypothetical protein 5813627 10367299 Psed_5448 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335434.1 5812785 R 675635 CDS YP_004335435.1 331699196 10367300 complement(5813629..5814408) 1 NC_015312.1 PFAM: Domain of unknown function DUF140; KEGG: amd:AMED_1781 ABC transport system permease; hypothetical protein 5814408 10367300 Psed_5449 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335435.1 5813629 R 675635 CDS YP_004335436.1 331699197 10367301 complement(5814405..5815472) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: svi:Svir_03690 ABC-type transport system involved in resistance to organic solvents, ATPase component; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 5815472 10367301 Psed_5450 Pseudonocardia dioxanivorans CB1190 Fe(3+)-transporting ATPase YP_004335436.1 5814405 R 675635 CDS YP_004335437.1 331699198 10367302 complement(5815577..5816548) 1 NC_015312.1 PFAM: Protein of unknown function DUF2236; KEGG: rha:RHA1_ro03740 hypothetical protein; hypothetical protein 5816548 10367302 Psed_5451 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335437.1 5815577 R 675635 CDS YP_004335438.1 331699199 10367303 complement(5816523..5817497) 1 NC_015312.1 KEGG: rop:ROP_pROB01-04060 ribonucleotide-diphosphate reductase subunit beta; ribonucleotide-diphosphate reductase subunit beta 5817497 10367303 Psed_5452 Pseudonocardia dioxanivorans CB1190 ribonucleotide-diphosphate reductase subunit beta YP_004335438.1 5816523 R 675635 CDS YP_004335439.1 331699200 10367304 complement(5817507..5818649) 1 NC_015312.1 KEGG: rop:ROP_pROB01-04070 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES 5818649 10367304 Psed_5453 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroES YP_004335439.1 5817507 R 675635 CDS YP_004335440.1 331699201 10367305 complement(5818949..5820208) 1 NC_015312.1 KEGG: mva:Mvan_0011 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 5820208 10367305 Psed_5454 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335440.1 5818949 R 675635 CDS YP_004335441.1 331699202 10367306 5820231..5820893 1 NC_015312.1 KEGG: mva:Mvan_0010 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5820893 10367306 Psed_5455 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335441.1 5820231 D 675635 CDS YP_004335442.1 331699203 10367307 5821044..5821598 1 NC_015312.1 KEGG: mmi:MMAR_3152 hypothetical protein; hypothetical protein 5821598 10367307 Psed_5456 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335442.1 5821044 D 675635 CDS YP_004335443.1 331699204 10367308 5821694..5821957 1 NC_015312.1 hypothetical protein 5821957 10367308 Psed_5457 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335443.1 5821694 D 675635 CDS YP_004335444.1 331699205 10367309 complement(5821909..5822211) 1 NC_015312.1 hypothetical protein 5822211 10367309 Psed_5458 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335444.1 5821909 R 675635 CDS YP_004335445.1 331699206 10367310 5822273..5823745 1 NC_015312.1 KEGG: pzu:PHZ_c3113 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 5823745 10367310 Psed_5459 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004335445.1 5822273 D 675635 CDS YP_004335446.1 331699207 10367311 5823834..5824922 1 NC_015312.1 KEGG: svi:Svir_23620 predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase 5824922 10367311 Psed_5460 Pseudonocardia dioxanivorans CB1190 alpha-methylacyl-CoA racemase YP_004335446.1 5823834 D 675635 CDS YP_004335447.1 331699208 10367312 complement(5825162..5825884) 1 NC_015312.1 KEGG: ami:Amir_6639 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 5825884 10367312 Psed_5461 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L1 YP_004335447.1 5825162 R 675635 CDS YP_004335448.1 331699209 10367313 complement(5825958..5826392) 1 NC_015312.1 TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal domain; Ribosomal protein L11, N-terminal domain; KEGG: req:REQ_36850 50S ribosomal protein L11 RplK; SMART: Ribosomal protein L11; 50S ribosomal protein L11 5826392 10367313 Psed_5462 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L11 YP_004335448.1 5825958 R 675635 CDS YP_004335449.1 331699210 10367314 complement(5826478..5827461) 1 NC_015312.1 TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KEGG: sen:SACE_6872 transcription antitermination regulator; SMART: Transcription antitermination protein, NusG, N-terminal; NusG antitermination factor 5827461 10367314 Psed_5463 Pseudonocardia dioxanivorans CB1190 NusG antitermination factor YP_004335449.1 5826478 R 675635 CDS YP_004335450.1 331699211 10367315 complement(5827538..5827882) 1 NC_015312.1 KEGG: sen:SACE_6873 protein translocation complex preprotein translocase subunit; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein SecE/Sec61-gamma protein; preprotein translocase subunit SecE 5827882 10367315 Psed_5464 Pseudonocardia dioxanivorans CB1190 preprotein translocase subunit SecE YP_004335450.1 5827538 R 675635 CDS YP_004335451.1 331699212 10367317 5828261..5829484 1 NC_015312.1 KEGG: ami:Amir_6643 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; aspartate transaminase 5829484 10367317 Psed_5465 Pseudonocardia dioxanivorans CB1190 aspartate transaminase YP_004335451.1 5828261 D 675635 CDS YP_004335452.1 331699213 10367318 complement(5829545..5829754) 1 NC_015312.1 KEGG: nml:Namu_1442 hypothetical protein; hypothetical protein 5829754 10367318 Psed_5466 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335452.1 5829545 R 675635 CDS YP_004335453.1 331699214 10367319 complement(5829865..5830299) 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: svi:Svir_03560 acyl dehydratase; acyl dehydratase MaoC 5830299 10367319 Psed_5467 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004335453.1 5829865 R 675635 CDS YP_004335454.1 331699215 10367320 complement(5830296..5830739) 1 NC_015312.1 KEGG: ami:Amir_6647 hypothetical protein; hypothetical protein 5830739 10367320 Psed_5468 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335454.1 5830296 R 675635 CDS YP_004335455.1 331699216 10367321 complement(5830742..5830909) 1 NC_015312.1 TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: nfa:nfa51190 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 5830909 10367321 Psed_5469 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L33 YP_004335455.1 5830742 R 675635 CDS YP_004335456.1 331699217 10367324 complement(5831236..5832909) 1 NC_015312.1 KEGG: fal:FRAAL4195 hypothetical protein; hypothetical protein 5832909 10367324 Psed_5470 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335456.1 5831236 R 675635 CDS YP_004335457.1 331699218 10367325 5833206..5833658 1 NC_015312.1 KEGG: cbr:CBG04650 Hypothetical protein CBG04650; hypothetical protein 5833658 10367325 Psed_5471 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335457.1 5833206 D 675635 CDS YP_004335458.1 331699219 10367326 5833655..5836756 1 NC_015312.1 KEGG: sna:Snas_1757 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5836756 10367326 Psed_5472 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335458.1 5833655 D 675635 CDS YP_004335459.1 331699220 10367327 5836857..5838143 1 NC_015312.1 KEGG: tbi:Tbis_2431 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 5838143 10367327 Psed_5473 Pseudonocardia dioxanivorans CB1190 linalool 8-monooxygenase YP_004335459.1 5836857 D 675635 CDS YP_004335460.1 331699221 10367328 5838140..5839810 1 NC_015312.1 KEGG: amd:AMED_0996 long-chain acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; 4-coumarate--CoA ligase 5839810 10367328 Psed_5474 Pseudonocardia dioxanivorans CB1190 4-coumarate--CoA ligase YP_004335460.1 5838140 D 675635 CDS YP_004335461.1 331699222 10367329 5840017..5840361 1 NC_015312.1 hypothetical protein 5840361 10367329 Psed_5475 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335461.1 5840017 D 675635 CDS YP_004335462.1 331699223 10367330 complement(5840474..5840689) 1 NC_015312.1 hypothetical protein 5840689 10367330 Psed_5476 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335462.1 5840474 R 675635 CDS YP_004335463.1 331699224 10367331 5840917..5841579 1 NC_015312.1 KEGG: fal:FRAAL1555 TenA family transcriptional activator; PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; TenA family transcriptional activator 5841579 10367331 Psed_5477 Pseudonocardia dioxanivorans CB1190 TenA family transcriptional activator YP_004335463.1 5840917 D 675635 CDS YP_004335464.1 331699225 10367332 complement(5841617..5842027) 1 NC_015312.1 PFAM: Membrane protein of unknown function; KEGG: mil:ML5_0169 hypothetical protein; hypothetical protein 5842027 10367332 Psed_5478 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335464.1 5841617 R 675635 CDS YP_004335465.1 331699226 10367333 complement(5842089..5843318) 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: amd:AMED_6648 beta-lactamase class C; beta-lactamase 5843318 10367333 Psed_5479 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004335465.1 5842089 R 675635 CDS YP_004335466.1 331699227 10367334 complement(5843372..5843692) 1 NC_015312.1 PFAM: Small multidrug resistance protein; KEGG: fra:Francci3_2692 small multidrug resistance protein; small multidrug resistance protein 5843692 10367334 Psed_5480 Pseudonocardia dioxanivorans CB1190 small multidrug resistance protein YP_004335466.1 5843372 R 675635 CDS YP_004335467.1 331699228 10367335 5843765..5844781 1 NC_015312.1 PFAM: Patatin/Phospholipase A2-related; KEGG: cre:CHLREDRAFT_174129 hypothetical protein; patatin 5844781 10367335 Psed_5481 Pseudonocardia dioxanivorans CB1190 patatin YP_004335467.1 5843765 D 675635 CDS YP_004335468.1 331699229 10367336 complement(5844882..5846192) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit 5846192 10367336 Psed_5482 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004335468.1 5844882 R 675635 CDS YP_004335469.1 331699230 10367337 5846514..5846987 1 NC_015312.1 hypothetical protein 5846987 10367337 Psed_5483 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335469.1 5846514 D 675635 CDS YP_004335470.1 331699231 10367338 complement(5847006..5847905) 1 NC_015312.1 KEGG: gob:Gobs_1832 peptidase S15; peptidase S15 5847905 10367338 Psed_5484 Pseudonocardia dioxanivorans CB1190 peptidase S15 YP_004335470.1 5847006 R 675635 CDS YP_004335471.1 331699232 10367339 complement(5848073..5848600) 1 NC_015312.1 KEGG: scb:SCAB_3531 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein 5848600 10367339 Psed_5485 Pseudonocardia dioxanivorans CB1190 phenylacetic acid degradation-like protein YP_004335471.1 5848073 R 675635 CDS YP_004335472.1 331699233 10367340 5848744..5849607 1 NC_015312.1 PFAM: BAAT/Acyl-CoA thioester hydrolase C-terminal; KEGG: ccs:CCNA_00926 acyl CoA thioesterase; BAAT/acyl-CoA thioester hydrolase 5849607 10367340 Psed_5486 Pseudonocardia dioxanivorans CB1190 BAAT/acyl-CoA thioester hydrolase YP_004335472.1 5848744 D 675635 CDS YP_004335473.1 331699234 10367341 complement(5849627..5850217) 1 NC_015312.1 KEGG: sen:SACE_6312 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 5850217 10367341 Psed_5487 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004335473.1 5849627 R 675635 CDS YP_004335474.1 331699235 10367342 5850281..5851258 1 NC_015312.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: stp:Strop_3403 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5851258 10367342 Psed_5488 Pseudonocardia dioxanivorans CB1190 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004335474.1 5850281 D 675635 CDS YP_004335475.1 331699236 10367343 5851255..5851689 1 NC_015312.1 PFAM: Domain of unknown function DUF336; KEGG: nfa:nfa26450 hypothetical protein; hypothetical protein 5851689 10367343 Psed_5489 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335475.1 5851255 D 675635 CDS YP_004335476.1 331699237 10367344 5851756..5852124 1 NC_015312.1 KEGG: rha:RHA1_ro04719 hypothetical protein; hypothetical protein 5852124 10367344 Psed_5490 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335476.1 5851756 D 675635 CDS YP_004335477.1 331699238 10367345 complement(5852134..5852598) 1 NC_015312.1 KEGG: fri:FraEuI1c_4776 dual specificity protein phosphatase; dual specificity protein phosphatase 5852598 10367345 Psed_5491 Pseudonocardia dioxanivorans CB1190 dual specificity protein phosphatase YP_004335477.1 5852134 R 675635 CDS YP_004335478.1 331699239 10367346 5852671..5853447 1 NC_015312.1 KEGG: amd:AMED_4233 HemK protein; TIGRFAM: Conserved hypothetical protein CHP03704, protein-(glutamine-N5) methyltransferase; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase 5853447 10367346 Psed_5492 Pseudonocardia dioxanivorans CB1190 protein-(glutamine-N5) methyltransferase YP_004335478.1 5852671 D 675635 CDS YP_004335479.1 331699240 10367347 5853808..5854389 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_13230 TetR family transcriptional regulator; TetR family transcriptional regulator 5854389 10367347 Psed_5493 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335479.1 5853808 D 675635 CDS YP_004335480.1 331699241 10367348 complement(5854448..5855245) 1 NC_015312.1 KEGG: ami:Amir_3310 transcriptional regulator, TetR family; manually curated; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator 5855245 10367348 Psed_5494 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335480.1 5854448 R 675635 CDS YP_004335481.1 331699242 10367349 5855405..5856142 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: lwe:lwe2751 3-ketoacyl-(acyl-carrier-protein) reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 5856142 10367349 Psed_5495 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004335481.1 5855405 D 675635 CDS YP_004335482.1 331699243 10367350 5856820..5857170 1 NC_015312.1 KEGG: amd:AMED_7834 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 5857170 10367350 Psed_5496 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004335482.1 5856820 D 675635 CDS YP_004335483.1 331699244 10367351 complement(5857381..5858547) 1 NC_015312.1 KEGG: rop:ROP_13220 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 5858547 10367351 Psed_5497 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004335483.1 5857381 R 675635 CDS YP_004335484.1 331699245 10367352 complement(5858565..5859347) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: msm:MSMEG_0715 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 5859347 10367352 Psed_5498 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004335484.1 5858565 R 675635 CDS YP_004335485.1 331699246 10367353 complement(5859344..5860891) 1 NC_015312.1 KEGG: rxy:Rxyl_0353 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5860891 10367353 Psed_5499 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004335485.1 5859344 R 675635 CDS YP_004335486.1 331699247 10367354 complement(5860903..5862081) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: rha:RHA1_ro05543 thiolase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase 5862081 10367354 Psed_5500 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004335486.1 5860903 R 675635 CDS YP_004335487.1 331699248 10367355 complement(5862141..5862932) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_4573 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5862932 10367355 Psed_5501 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004335487.1 5862141 R 675635 CDS YP_004335488.1 331699249 10367356 complement(5863059..5863319) 1 NC_015312.1 hypothetical protein 5863319 10367356 Psed_5502 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335488.1 5863059 R 675635 CDS YP_004335489.1 331699250 10367357 complement(5863380..5865338) 1 NC_015312.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: azc:AZC_2116 hydantoin utilization protein B; hydantoinase B/oxoprolinase 5865338 10367357 Psed_5503 Pseudonocardia dioxanivorans CB1190 hydantoinase B/oxoprolinase YP_004335489.1 5863380 R 675635 CDS YP_004335490.1 331699251 10367358 complement(5865335..5867422) 1 NC_015312.1 KEGG: axy:AXYL_04686 hydantoinase/oxoprolinase protein; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 5867422 10367358 Psed_5504 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004335490.1 5865335 R 675635 CDS YP_004335491.1 331699252 10367359 complement(5867777..5868940) 1 NC_015312.1 KEGG: cai:Caci_5437 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase 5868940 10367359 Psed_5505 Pseudonocardia dioxanivorans CB1190 alpha-methylacyl-CoA racemase YP_004335491.1 5867777 R 675635 CDS YP_004335492.1 331699253 10367360 complement(5869002..5870006) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: hsl:OE2918F alkanesulfonate monooxygenase; luciferase-like protein 5870006 10367360 Psed_5506 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004335492.1 5869002 R 675635 CDS YP_004335493.1 331699254 10367361 complement(5870008..5871597) 1 NC_015312.1 KEGG: cag:Cagg_0832 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 5871597 10367361 Psed_5507 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004335493.1 5870008 R 675635 CDS YP_004335494.1 331699255 10367362 complement(5871798..5872481) 1 NC_015312.1 PFAM: Peptidase S54, rhomboid domain; KEGG: rop:ROP_60150 hypothetical membrane protein; peptidase S54, rhomboid domain-containing protein 5872481 10367362 Psed_5508 Pseudonocardia dioxanivorans CB1190 peptidase S54, rhomboid domain-containing protein YP_004335494.1 5871798 R 675635 CDS YP_004335495.1 331699256 10367363 5872776..5873792 1 NC_015312.1 KEGG: ami:Amir_3562 bile acid:sodium symporter; bile acid:sodium symporter 5873792 10367363 Psed_5509 Pseudonocardia dioxanivorans CB1190 bile acid:sodium symporter YP_004335495.1 5872776 D 675635 CDS YP_004335496.1 331699257 10367365 5874107..5875159 1 NC_015312.1 KEGG: nfa:nfa20960 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 5875159 10367365 Psed_5511 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004335496.1 5874107 D 675635 CDS YP_004335497.1 331699258 10367366 5875227..5875940 1 NC_015312.1 KEGG: bid:Bind_2090 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 5875940 10367366 Psed_5512 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004335497.1 5875227 D 675635 CDS YP_004335498.1 331699259 10367367 5876020..5876283 1 NC_015312.1 PFAM: Negative transcriptional regulator; KEGG: tbi:Tbis_2719 FMN-binding negative transcriptional regulator; Negative transcriptional regulator 5876283 10367367 Psed_5513 Pseudonocardia dioxanivorans CB1190 Negative transcriptional regulator YP_004335498.1 5876020 D 675635 CDS YP_004335499.1 331699260 10367368 5876252..5876899 1 NC_015312.1 PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: kra:Krad_2352 MOSC domain containing protein; MOSC domain-containing protein 5876899 10367368 Psed_5514 Pseudonocardia dioxanivorans CB1190 MOSC domain-containing protein YP_004335499.1 5876252 D 675635 CDS YP_004335500.1 331699261 10367369 complement(5876957..5879176) 1 NC_015312.1 PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: ami:Amir_4193 catalase/peroxidase HPI; catalase-peroxidase 5879176 10367369 Psed_5515 Pseudonocardia dioxanivorans CB1190 catalase-peroxidase YP_004335500.1 5876957 R 675635 CDS YP_004335501.1 331699262 10367370 complement(5879205..5879636) 1 NC_015312.1 KEGG: fri:FraEuI1c_2008 ferric uptake regulator, Fur family; manually curated; PFAM: Ferric-uptake regulator; Fur family ferric uptake regulator 5879636 10367370 Psed_5516 Pseudonocardia dioxanivorans CB1190 Fur family ferric uptake regulator YP_004335501.1 5879205 R 675635 CDS YP_004335502.1 331699263 10367371 5880299..5881027 1 NC_015312.1 hypothetical protein 5881027 10367371 Psed_5517 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335502.1 5880299 D 675635 CDS YP_004335503.1 331699264 10367372 complement(5881066..5881797) 1 NC_015312.1 PFAM: Protein of unknown function DUF81; KEGG: sgr:SGR_5215 hypothetical protein; hypothetical protein 5881797 10367372 Psed_5518 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335503.1 5881066 R 675635 CDS YP_004335504.1 331699265 10367373 complement(5882059..5882622) 1 NC_015312.1 KEGG: cfl:Cfla_3568 hypothetical protein; hypothetical protein 5882622 10367373 Psed_5519 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335504.1 5882059 R 675635 CDS YP_004335505.1 331699266 10367374 5882909..5883451 1 NC_015312.1 KEGG: cwo:Cwoe_5131 hypothetical protein; hypothetical protein 5883451 10367374 Psed_5520 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335505.1 5882909 D 675635 CDS YP_004335506.1 331699267 10367375 5884036..5884644 1 NC_015312.1 KEGG: req:REQ_34720 lipase; manually curated; PFAM: Lipase, GDSL; G-D-S-L family lipolytic protein 5884644 10367375 Psed_5521 Pseudonocardia dioxanivorans CB1190 G-D-S-L family lipolytic protein YP_004335506.1 5884036 D 675635 CDS YP_004335507.1 331699268 10367378 5887940..5888911 1 NC_015312.1 KEGG: pth:PTH_2401 hydrolase; hydrolase 5888911 10367378 Psed_5524 Pseudonocardia dioxanivorans CB1190 hydrolase YP_004335507.1 5887940 D 675635 CDS YP_004335508.1 331699269 10367379 complement(5888908..5889729) 1 NC_015312.1 KEGG: nfa:nfa2260 hypothetical protein; hypothetical protein 5889729 10367379 Psed_5525 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335508.1 5888908 R 675635 CDS YP_004335509.1 331699270 10367380 complement(5889734..5890561) 1 NC_015312.1 KEGG: sgr:SGR_3587 hypothetical protein; hypothetical protein 5890561 10367380 Psed_5526 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335509.1 5889734 R 675635 CDS YP_004335510.1 331699271 10367381 5890688..5891116 1 NC_015312.1 KEGG: cai:Caci_8555 hypothetical protein; hypothetical protein 5891116 10367381 Psed_5527 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335510.1 5890688 D 675635 CDS YP_004335511.1 331699272 10367382 5891226..5891624 1 NC_015312.1 hypothetical protein 5891624 10367382 Psed_5528 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335511.1 5891226 D 675635 CDS YP_004335512.1 331699273 10367383 5891621..5891905 1 NC_015312.1 PFAM: Transcription factor WhiB; KEGG: tcu:Tcur_0266 transcription factor WhiB; transcription factor WhiB 5891905 10367383 Psed_5529 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004335512.1 5891621 D 675635 CDS YP_004335513.1 331699274 10367384 5891902..5892069 1 NC_015312.1 hypothetical protein 5892069 10367384 Psed_5530 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335513.1 5891902 D 675635 CDS YP_004335514.1 331699275 10367385 5892066..5893559 1 NC_015312.1 KEGG: ami:Amir_0921 DNA segregation ATPase FtsK/SpoIIIE-related protein; PFAM: Cell divisionFtsK/SpoIIIE; SMART: ATPase, AAA+ type, core; DNA translocase FtsK 5893559 10367385 Psed_5531 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004335514.1 5892066 D 675635 CDS YP_004335515.1 331699276 10367386 5893556..5895235 1 NC_015312.1 KEGG: ami:Amir_0922 hypothetical protein; hypothetical protein 5895235 10367386 Psed_5532 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335515.1 5893556 D 675635 CDS YP_004335516.1 331699277 10367387 5895232..5895441 1 NC_015312.1 KEGG: sro:Sros_8661 hypothetical protein; hypothetical protein 5895441 10367387 Psed_5533 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335516.1 5895232 D 675635 CDS YP_004335517.1 331699278 10367388 5895438..5896823 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: amd:AMED_6149 integrase; integrase protein 5896823 10367388 Psed_5534 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004335517.1 5895438 D 675635 CDS YP_004335518.1 331699279 10367390 5897108..5897599 1 NC_015312.1 KEGG: amd:AMED_0579 hypothetical protein; HAMAP: Protein of unknown function DUF520; PFAM: Protein of unknown function DUF520; hypothetical protein 5897599 10367390 Psed_5535 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335518.1 5897108 D 675635 CDS YP_004335519.1 331699280 10367391 complement(5897642..5898502) 1 NC_015312.1 PFAM: Drug/metabolite transporter; KEGG: nda:Ndas_5358 protein of unknown function DUF6 transmembrane; hypothetical protein 5898502 10367391 Psed_5536 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335519.1 5897642 R 675635 CDS YP_004335520.1 331699281 10367392 5898790..5899365 1 NC_015312.1 KEGG: fre:Franean1_1505 hypothetical protein; hypothetical protein 5899365 10367392 Psed_5537 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335520.1 5898790 D 675635 CDS YP_004335521.1 331699282 10367393 complement(5899386..5900279) 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 5900279 10367393 Psed_5538 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004335521.1 5899386 R 675635 CDS YP_004335522.1 331699283 10367394 5900572..5900913 1 NC_015312.1 hypothetical protein 5900913 10367394 Psed_5539 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335522.1 5900572 D 675635 CDS YP_004335523.1 331699284 10367395 complement(5900914..5901141) 1 NC_015312.1 hypothetical protein 5901141 10367395 Psed_5540 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335523.1 5900914 R 675635 CDS YP_004335524.1 331699285 10367396 complement(5901291..5902118) 1 NC_015312.1 KEGG: bbe:BBR47_04660 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 5902118 10367396 Psed_5541 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004335524.1 5901291 R 675635 CDS YP_004335525.1 331699286 10367397 complement(5902162..5905161) 1 NC_015312.1 KEGG: ade:Adeh_3289 SARP family transcriptional regulator; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 5905161 10367397 Psed_5542 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004335525.1 5902162 R 675635 CDS YP_004335526.1 331699287 10367398 5905269..5905625 1 NC_015312.1 KEGG: gbm:Gbem_0528 hypothetical protein; hypothetical protein 5905625 10367398 Psed_5543 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335526.1 5905269 D 675635 CDS YP_004335527.1 331699288 10367399 5905627..5906184 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: sro:Sros_7305 hypothetical protein; hypothetical protein 5906184 10367399 Psed_5544 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335527.1 5905627 D 675635 CDS YP_004335528.1 331699289 10367400 5906181..5906534 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: mlo:mll8193 hypothetical protein; hypothetical protein 5906534 10367400 Psed_5545 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335528.1 5906181 D 675635 CDS YP_004335529.1 331699290 10367401 complement(5906548..5907396) 1 NC_015312.1 KEGG: sen:SACE_6884 protease HtpX-like protein; HAMAP: Peptidase M48, protease HtpX, PFAM: Peptidase M48; protease htpX 5907396 10367401 Psed_5546 Pseudonocardia dioxanivorans CB1190 protease htpX YP_004335529.1 5906548 R 675635 CDS YP_004335530.1 331699291 10367402 complement(5907486..5908037) 1 NC_015312.1 PFAM: Thioesterase superfamily; KEGG: fri:FraEuI1c_2920 thioesterase superfamily protein; thioesterase 5908037 10367402 Psed_5547 Pseudonocardia dioxanivorans CB1190 thioesterase YP_004335530.1 5907486 R 675635 CDS YP_004335531.1 331699292 10367403 5908072..5908839 1 NC_015312.1 PFAM: Crotonase, core; KEGG: ami:Amir_6663 enoyl-CoA hydratase; enoyl-CoA hydratase 5908839 10367403 Psed_5548 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004335531.1 5908072 D 675635 CDS YP_004335532.1 331699293 10367404 5908946..5910889 1 NC_015312.1 TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: ami:Amir_6664 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; 2-oxoacid:acceptor oxidoreductase subunit alpha 5910889 10367404 Psed_5549 Pseudonocardia dioxanivorans CB1190 2-oxoacid:acceptor oxidoreductase subunit alpha YP_004335532.1 5908946 D 675635 CDS YP_004335533.1 331699294 10367405 5910886..5911986 1 NC_015312.1 KEGG: rha:RHA1_ro02389 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; 2-oxoglutarate synthase 5911986 10367405 Psed_5550 Pseudonocardia dioxanivorans CB1190 2-oxoglutarate synthase YP_004335533.1 5910886 D 675635 CDS YP_004335534.1 331699295 10367406 complement(5912102..5912491) 1 NC_015312.1 KEGG: amd:AMED_0538 hypothetical protein; hypothetical protein 5912491 10367406 Psed_5551 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335534.1 5912102 R 675635 CDS YP_004335535.1 331699296 10367407 complement(5912502..5913170) 1 NC_015312.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: amd:AMED_8588 OmpA family protein; OmpA/MotB domain-containing protein 5913170 10367407 Psed_5552 Pseudonocardia dioxanivorans CB1190 OmpA/MotB domain-containing protein YP_004335535.1 5912502 R 675635 CDS YP_004335536.1 331699297 10367409 5914388..5915320 1 NC_015312.1 TIGRFAM: RarD protein; KEGG: ami:Amir_6667 RarD protein, DMT superfamily transporter; RarD protein, DMT superfamily transporter 5915320 10367409 Psed_5554 Pseudonocardia dioxanivorans CB1190 RarD protein, DMT superfamily transporter YP_004335536.1 5914388 D 675635 CDS YP_004335537.1 331699298 10367410 complement(5915373..5916368) 1 NC_015312.1 KEGG: ami:Amir_6668 polyprenyl synthetase; PFAM: Polyprenyl synthetase; trans-hexaprenyltranstransferase 5916368 10367410 Psed_5555 Pseudonocardia dioxanivorans CB1190 trans-hexaprenyltranstransferase YP_004335537.1 5915373 R 675635 CDS YP_004335538.1 331699299 10367411 complement(5916386..5918011) 1 NC_015312.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; HAMAP: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: sen:SACE_6889 NADH dehydrogenase subunit N; NAD(P)H-quinone oxidoreductase subunit 2 5918011 10367411 Psed_5556 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit 2 YP_004335538.1 5916386 R 675635 CDS YP_004335539.1 331699300 10367412 complement(5918008..5919621) 1 NC_015312.1 TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: ami:Amir_6670 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M 5919621 10367412 Psed_5557 Pseudonocardia dioxanivorans CB1190 proton-translocating NADH-quinone oxidoreductase subunit M YP_004335539.1 5918008 R 675635 CDS YP_004335540.1 331699301 10367413 complement(5919618..5921576) 1 NC_015312.1 TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: svi:Svir_03270 NADH dehydrogenase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; proton-translocating NADH-quinone oxidoreductase subunit L 5921576 10367413 Psed_5558 Pseudonocardia dioxanivorans CB1190 proton-translocating NADH-quinone oxidoreductase subunit L YP_004335540.1 5919618 R 675635 CDS YP_004335541.1 331699302 10367414 complement(5921586..5921885) 1 NC_015312.1 KEGG: sen:SACE_6892 NADH dehydrogenase subunit K; HAMAP: NADH-ubiquinone oxidoreductase chain 4L/K; PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; NAD(P)H-quinone oxidoreductase subunit 4L 5921885 10367414 Psed_5559 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit 4L YP_004335541.1 5921586 R 675635 CDS YP_004335542.1 331699303 10367415 complement(5921882..5922706) 1 NC_015312.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: amd:AMED_0529 NADH dehydrogenase I subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 5922706 10367415 Psed_5560 Pseudonocardia dioxanivorans CB1190 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004335542.1 5921882 R 675635 CDS YP_004335543.1 331699304 10367416 complement(5922703..5923269) 1 NC_015312.1 PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: amd:AMED_0528 NADH dehydrogenase I subunit I; NAD(P)H-quinone oxidoreductase subunit I 5923269 10367416 Psed_5561 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit I YP_004335543.1 5922703 R 675635 CDS YP_004335544.1 331699305 10367417 complement(5923270..5924565) 1 NC_015312.1 KEGG: ami:Amir_6675 NADH dehydrogenase subunit H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H; NADH dehydrogenase (quinone) 5924565 10367417 Psed_5562 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004335544.1 5923270 R 675635 CDS YP_004335545.1 331699306 10367418 complement(5924562..5927024) 1 NC_015312.1 SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: ami:Amir_6676 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; NADH-quinone oxidoreductase subunit G 5927024 10367418 Psed_5563 Pseudonocardia dioxanivorans CB1190 NADH-quinone oxidoreductase subunit G YP_004335545.1 5924562 R 675635 CDS YP_004335546.1 331699307 10367419 complement(5927021..5928373) 1 NC_015312.1 SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: sen:SACE_6897 NADH dehydrogenase I chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 5928373 10367419 Psed_5564 Pseudonocardia dioxanivorans CB1190 NADH-quinone oxidoreductase subunit F YP_004335546.1 5927021 R 675635 CDS YP_004335547.1 331699308 10367420 complement(5928370..5929191) 1 NC_015312.1 KEGG: ami:Amir_6678 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH dehydrogenase (quinone) 5929191 10367420 Psed_5565 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004335547.1 5928370 R 675635 CDS YP_004335548.1 331699309 10367421 complement(5929223..5930545) 1 NC_015312.1 PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, subunit D; HAMAP: NAD(P)H-quinone oxidoreductase subunit D/H; KEGG: amd:AMED_0523 NADH dehydrogenase I subunit D; NAD(P)H-quinone oxidoreductase subunit H 5930545 10367421 Psed_5566 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit H YP_004335548.1 5929223 R 675635 CDS YP_004335549.1 331699310 10367422 complement(5930542..5931417) 1 NC_015312.1 TIGRFAM: NADH dehydrogenase, subunit C; HAMAP: NADH dehydrogenase, subunit C; KEGG: svi:Svir_03180 NADH dehydrogenase subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; NAD(P)H-quinone oxidoreductase subunit J 5931417 10367422 Psed_5567 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit J YP_004335549.1 5930542 R 675635 CDS YP_004335550.1 331699311 10367423 complement(5931425..5931976) 1 NC_015312.1 PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH-ubiquinone oxidoreductase, 20 Kd subunit; HAMAP: NADH-ubiquinone oxidoreductase, 20 Kd subunit; KEGG: ami:Amir_6681 NADH dehydrogenase subunit B; NAD(P)H-quinone oxidoreductase subunit K 5931976 10367423 Psed_5568 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit K YP_004335550.1 5931425 R 675635 CDS YP_004335551.1 331699312 10367424 complement(5931986..5932351) 1 NC_015312.1 KEGG: sen:SACE_6902 NADH dehydrogenase I chain A; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; NAD(P)H-quinone oxidoreductase subunit 3 5932351 10367424 Psed_5569 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit 3 YP_004335551.1 5931986 R 675635 CDS YP_004335552.1 331699313 10367425 complement(5932469..5933794) 1 NC_015312.1 KEGG: sen:SACE_6903 electron transfer oxidoreductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase; geranylgeranyl reductase 5933794 10367425 Psed_5570 Pseudonocardia dioxanivorans CB1190 geranylgeranyl reductase YP_004335552.1 5932469 R 675635 CDS YP_004335553.1 331699314 10367426 complement(5933993..5934682) 1 NC_015312.1 TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: mav:MAV_4584 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE 5934682 10367426 Psed_5571 Pseudonocardia dioxanivorans CB1190 ubiquinone/menaquinone biosynthesis methyltransferase ubiE YP_004335553.1 5933993 R 675635 CDS YP_004335554.1 331699315 10367427 complement(5934693..5935865) 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: amd:AMED_0515 glycosyl transferase; group 1 glycosyl transferase 5935865 10367427 Psed_5572 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004335554.1 5934693 R 675635 CDS YP_004335555.1 331699316 10367428 complement(5935822..5937015) 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: sen:SACE_6905 glycosyl transferase, group 1; group 1 glycosyl transferase 5937015 10367428 Psed_5573 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004335555.1 5935822 R 675635 CDS YP_004335556.1 331699317 10367429 5937370..5938212 1 NC_015312.1 PFAM: Inositol monophosphatase; KEGG: amd:AMED_0513 myo-inositol-1(or 4)-monophosphatase; inositol monophosphatase 5938212 10367429 Psed_5574 Pseudonocardia dioxanivorans CB1190 inositol monophosphatase YP_004335556.1 5937370 D 675635 CDS YP_004335557.1 331699318 10367431 complement(5939162..5939674) 1 NC_015312.1 KEGG: sen:SACE_6910 hypothetical protein; hypothetical protein 5939674 10367431 Psed_5576 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335557.1 5939162 R 675635 CDS YP_004335558.1 331699319 10367432 5939818..5941023 1 NC_015312.1 TIGRFAM: Isochorismate synthase; KEGG: ami:Amir_6694 isochorismate synthase; PFAM: Chorismate binding, C-terminal; isochorismate synthase 5941023 10367432 Psed_5577 Pseudonocardia dioxanivorans CB1190 isochorismate synthase YP_004335558.1 5939818 D 675635 CDS YP_004335559.1 331699320 10367433 complement(5941321..5944119) 1 NC_015312.1 KEGG: msm:MSMEG_3290 regulatory protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5944119 10367433 Psed_5578 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335559.1 5941321 R 675635 CDS YP_004335560.1 331699321 10367434 5944313..5945161 1 NC_015312.1 KEGG: mav:MAV_2744 MOSC domain-containing protein; manually curated; PFAM: MOSC, N-terminal beta barrel; Molybdenum cofactor sulfurase, C-terminal; MOSC domain-containing protein beta barrel domain-containing protein 5945161 10367434 Psed_5579 Pseudonocardia dioxanivorans CB1190 MOSC domain-containing protein beta barrel domain-containing protein YP_004335560.1 5944313 D 675635 CDS YP_004335561.1 331699322 10367435 5945430..5945813 1 NC_015312.1 TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: gbr:Gbro_2776 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein 5945813 10367435 Psed_5580 Pseudonocardia dioxanivorans CB1190 glycine cleavage system H protein YP_004335561.1 5945430 D 675635 CDS YP_004335562.1 331699323 10367436 complement(5945846..5946382) 1 NC_015312.1 PFAM: Protein of unknown function DUF1470; KEGG: msp:Mspyr1_42590 hypothetical protein; hypothetical protein 5946382 10367436 Psed_5581 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335562.1 5945846 R 675635 CDS YP_004335563.1 331699324 10367437 5946452..5947345 1 NC_015312.1 PFAM: Protein of unknown function DUF427; KEGG: rop:ROP_13420 hypothetical protein; hypothetical protein 5947345 10367437 Psed_5582 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335563.1 5946452 D 675635 CDS YP_004335564.1 331699325 10367438 5947400..5948284 1 NC_015312.1 KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 5948284 10367438 Psed_5583 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004335564.1 5947400 D 675635 CDS YP_004335565.1 331699326 10367439 5948337..5950067 1 NC_015312.1 KEGG: amd:AMED_3893 phthalate 4,5-dioxygenase; PFAM: Molybdenum cofactor sulfurase, C-terminal; 3-alpha domain; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; nitric oxide dioxygenase 5950067 10367439 Psed_5584 Pseudonocardia dioxanivorans CB1190 nitric oxide dioxygenase YP_004335565.1 5948337 D 675635 CDS YP_004335566.1 331699327 10367440 5950088..5950522 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_1161 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5950522 10367440 Psed_5585 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004335566.1 5950088 D 675635 CDS YP_004335567.1 331699328 10367441 5950630..5951016 1 NC_015312.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bid:Bind_2018 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 5951016 10367441 Psed_5586 Pseudonocardia dioxanivorans CB1190 4-oxalocrotonate tautomerase YP_004335567.1 5950630 D 675635 CDS YP_004335568.1 331699329 10367442 complement(5951076..5952752) 1 NC_015312.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; TIGRFAM: Menaquinone biosynthesis protein MenD; KEGG: nfa:nfa51330 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 5952752 10367442 Psed_5587 Pseudonocardia dioxanivorans CB1190 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_004335568.1 5951076 R 675635 CDS YP_004335569.1 331699330 10367443 5952786..5954072 1 NC_015312.1 KEGG: ami:Amir_4825 aminotransferase class-III; PFAM: Aminotransferase class-III; 2,2-dialkylglycine decarboxylase 5954072 10367443 Psed_5588 Pseudonocardia dioxanivorans CB1190 2,2-dialkylglycine decarboxylase YP_004335569.1 5952786 D 675635 CDS YP_004335570.1 331699331 10367444 5954090..5955730 1 NC_015312.1 KEGG: sgr:SGR_985 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 5955730 10367444 Psed_5589 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004335570.1 5954090 D 675635 CDS YP_004335571.1 331699332 10367445 complement(5955775..5956083) 1 NC_015312.1 PFAM: FeS cluster biogenesis; KEGG: cwo:Cwoe_3919 HesB/YadR/YfhF-family protein; HesB/YadR/YfhF-family protein 5956083 10367445 Psed_5590 Pseudonocardia dioxanivorans CB1190 HesB/YadR/YfhF-family protein YP_004335571.1 5955775 R 675635 CDS YP_004335572.1 331699333 10367446 complement(5956147..5956974) 1 NC_015312.1 KEGG: sro:Sros_7952 2,5-didehydrogluconate reductase; PFAM: NADP-dependent oxidoreductase domain; 2,5-didehydrogluconate reductase 5956974 10367446 Psed_5591 Pseudonocardia dioxanivorans CB1190 2,5-didehydrogluconate reductase YP_004335572.1 5956147 R 675635 CDS YP_004335573.1 331699334 10367447 complement(5957291..5957989) 1 NC_015312.1 KEGG: nml:Namu_4576 hypothetical protein; hypothetical protein 5957989 10367447 Psed_5592 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335573.1 5957291 R 675635 CDS YP_004335574.1 331699335 10367448 complement(5958022..5960970) 1 NC_015312.1 KEGG: sen:SACE_3788 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich domain; D-lactate dehydrogenase 5960970 10367448 Psed_5593 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase YP_004335574.1 5958022 R 675635 CDS YP_004335575.1 331699336 10367449 5961200..5961865 1 NC_015312.1 PFAM: ANTAR; KEGG: gob:Gobs_0560 PAS/PAC sensor protein; ANTAR domain-containing protein 5961865 10367449 Psed_5594 Pseudonocardia dioxanivorans CB1190 ANTAR domain-containing protein YP_004335575.1 5961200 D 675635 CDS YP_004335576.1 331699337 10367450 complement(5962037..5962561) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: fre:Franean1_4388 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 5962561 10367450 Psed_5595 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004335576.1 5962037 R 675635 CDS YP_004335577.1 331699338 10367451 5962608..5963117 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_2406 transcriptional regulator, TetR family protein; TetR family transcriptional regulator 5963117 10367451 Psed_5596 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335577.1 5962608 D 675635 CDS YP_004335578.1 331699339 10367452 5963202..5964110 1 NC_015312.1 TIGRFAM: Naphthoate synthase; KEGG: ami:Amir_6701 naphthoate synthase; PFAM: Crotonase, core; naphthoate synthase 5964110 10367452 Psed_5597 Pseudonocardia dioxanivorans CB1190 naphthoate synthase YP_004335578.1 5963202 D 675635 CDS YP_004335579.1 331699340 10367453 complement(5964220..5965287) 1 NC_015312.1 KEGG: sen:SACE_1100 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 5965287 10367453 Psed_5598 Pseudonocardia dioxanivorans CB1190 PDZ/DHR/GLGF domain-containing protein YP_004335579.1 5964220 R 675635 CDS YP_004335580.1 331699341 10367454 complement(5965409..5967841) 1 NC_015312.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; Helicase, C-terminal; Helicase-associated domain; KEGG: amd:AMED_1284 ATP-dependent helicase HrpB; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase-associated domain; ATP-dependent helicase HrpB 5967841 10367454 Psed_5599 Pseudonocardia dioxanivorans CB1190 ATP-dependent helicase HrpB YP_004335580.1 5965409 R 675635 CDS YP_004335581.1 331699342 10367455 5967937..5969100 1 NC_015312.1 KEGG: cfl:Cfla_2727 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5969100 10367455 Psed_5600 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004335581.1 5967937 D 675635 CDS YP_004335582.1 331699343 10367456 5969255..5970544 1 NC_015312.1 PFAM: SH3, type 3; KEGG: ami:Amir_6699 hypothetical protein; SH3 type 3 domain-containing protein 5970544 10367456 Psed_5601 Pseudonocardia dioxanivorans CB1190 SH3 type 3 domain-containing protein YP_004335582.1 5969255 D 675635 CDS YP_004335583.1 331699344 10367457 5970554..5971435 1 NC_015312.1 KEGG: sen:SACE_6917 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 5971435 10367457 Psed_5602 Pseudonocardia dioxanivorans CB1190 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_004335583.1 5970554 D 675635 CDS YP_004335584.1 331699345 10367458 complement(5971391..5971750) 1 NC_015312.1 KEGG: ami:Amir_6707 hypothetical protein; hypothetical protein 5971750 10367458 Psed_5603 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335584.1 5971391 R 675635 CDS YP_004335585.1 331699346 10367459 5971985..5972203 1 NC_015312.1 KEGG: ami:Amir_6709 DNA binding domain protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: HTH transcriptional regulator, MerR; excisionase 5972203 10367459 Psed_5604 Pseudonocardia dioxanivorans CB1190 excisionase YP_004335585.1 5971985 D 675635 CDS YP_004335586.1 331699347 10367460 5972358..5972597 1 NC_015312.1 KEGG: amd:AMED_0501 hypothetical protein; hypothetical protein 5972597 10367460 Psed_5605 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335586.1 5972358 D 675635 CDS YP_004335587.1 331699348 10367461 complement(5972643..5975615) 1 NC_015312.1 KEGG: amd:AMED_0500 hypothetical protein; hypothetical protein 5975615 10367461 Psed_5606 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335587.1 5972643 R 675635 CDS YP_004335588.1 331699349 10367462 complement(5975884..5976858) 1 NC_015312.1 KEGG: svi:Svir_02970 cytochrome c-type biogenesis protein CcsB; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 5976858 10367462 Psed_5607 Pseudonocardia dioxanivorans CB1190 cytochrome c-type biogenesis protein CcsB YP_004335588.1 5975884 R 675635 CDS YP_004335589.1 331699350 10367463 complement(5976858..5978765) 1 NC_015312.1 PFAM: Cytochrome c biogenesis protein; KEGG: sen:SACE_6931 cytochrome c biogenesis membrane protein; ResB family protein 5978765 10367463 Psed_5608 Pseudonocardia dioxanivorans CB1190 ResB family protein YP_004335589.1 5976858 R 675635 CDS YP_004335590.1 331699351 10367464 complement(5978767..5979540) 1 NC_015312.1 PFAM: Cytochrome c assembly protein, transmembrane domain; KEGG: sen:SACE_6932 cytochrome c-type biogenesis protein; cytochrome c biogenesis protein transmembrane region 5979540 10367464 Psed_5609 Pseudonocardia dioxanivorans CB1190 cytochrome c biogenesis protein transmembrane region YP_004335590.1 5978767 R 675635 CDS YP_004335591.1 331699352 10367465 complement(5979624..5980217) 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sen:SACE_6933 thiol-disulfide isomerase/thioredoxin; alkyl hydroperoxide reductase 5980217 10367465 Psed_5610 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004335591.1 5979624 R 675635 CDS YP_004335592.1 331699353 10367466 complement(5980214..5980846) 1 NC_015312.1 KEGG: gbr:Gbro_1035 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 5980846 10367466 Psed_5611 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004335592.1 5980214 R 675635 CDS YP_004335593.1 331699354 10367467 complement(5980843..5982174) 1 NC_015312.1 PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: nfa:nfa51600 glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde 2,1-aminomutase 5982174 10367467 Psed_5612 Pseudonocardia dioxanivorans CB1190 glutamate-1-semialdehyde 2,1-aminomutase YP_004335593.1 5980843 R 675635 CDS YP_004335594.1 331699355 10367468 complement(5982277..5983413) 1 NC_015312.1 KEGG: gob:Gobs_4422 hypothetical protein; hypothetical protein 5983413 10367468 Psed_5613 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335594.1 5982277 R 675635 CDS YP_004335595.1 331699356 10367469 complement(5983528..5984037) 1 NC_015312.1 KEGG: bcv:Bcav_0688 hypothetical protein; hypothetical protein 5984037 10367469 Psed_5614 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335595.1 5983528 R 675635 CDS YP_004335596.1 331699357 10367470 complement(5984209..5985030) 1 NC_015312.1 PFAM: RDD; KEGG: sro:Sros_9150 membrane protein/domain-like protein; RDD domain-containing protein 5985030 10367470 Psed_5615 Pseudonocardia dioxanivorans CB1190 RDD domain-containing protein YP_004335596.1 5984209 R 675635 CDS YP_004335597.1 331699358 10367471 complement(5985096..5986076) 1 NC_015312.1 KEGG: ami:Amir_6727 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; porphobilinogen synthase 5986076 10367471 Psed_5616 Pseudonocardia dioxanivorans CB1190 porphobilinogen synthase YP_004335597.1 5985096 R 675635 CDS YP_004335598.1 331699359 10367472 complement(5986394..5987935) 1 NC_015312.1 KEGG: ami:Amir_6728 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; uroporphyrinogen-III C-methyltransferase 5987935 10367472 Psed_5617 Pseudonocardia dioxanivorans CB1190 uroporphyrinogen-III C-methyltransferase YP_004335598.1 5986394 R 675635 CDS YP_004335599.1 331699360 10367473 complement(5987932..5988915) 1 NC_015312.1 TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; KEGG: ami:Amir_6729 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain; porphobilinogen deaminase 5988915 10367473 Psed_5618 Pseudonocardia dioxanivorans CB1190 porphobilinogen deaminase YP_004335599.1 5987932 R 675635 CDS YP_004335600.1 331699361 10367474 complement(5988912..5990324) 1 NC_015312.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: sen:SACE_6946 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; glutamyl-tRNA reductase 5990324 10367474 Psed_5619 Pseudonocardia dioxanivorans CB1190 glutamyl-tRNA reductase YP_004335600.1 5988912 R 675635 CDS YP_004335601.1 331699362 10367475 complement(5990327..5991163) 1 NC_015312.1 HAMAP: Transcriptional repressor, redox-sensing, Rex; PFAM: CoA-binding; Rex DNA-binding, C-terminal; KEGG: amd:AMED_0479 AT-rich DNA-binding protein; SMART: CoA-binding; redox-sensing transcriptional repressor rex 5991163 10367475 Psed_5620 Pseudonocardia dioxanivorans CB1190 redox-sensing transcriptional repressor rex YP_004335601.1 5990327 R 675635 CDS YP_004335602.1 331699363 10367476 complement(5991500..5992183) 1 NC_015312.1 KEGG: amd:AMED_7496 fasciclin repeat-containing protein; PFAM: FAS1 domain; SMART: FAS1 domain; beta-Ig-H3/fasciclin 5992183 10367476 Psed_5621 Pseudonocardia dioxanivorans CB1190 beta-Ig-H3/fasciclin YP_004335602.1 5991500 R 675635 CDS YP_004335603.1 331699364 10367477 complement(5992301..5994121) 1 NC_015312.1 PFAM: Oxidoreductase, molybdopterin-binding domain; Moybdenum cofactor oxidoreductase, dimerisation; KEGG: ami:Amir_6733 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein 5994121 10367477 Psed_5622 Pseudonocardia dioxanivorans CB1190 oxidoreductase molybdopterin binding protein YP_004335603.1 5992301 R 675635 CDS YP_004335604.1 331699365 10367478 complement(5994195..5994437) 1 NC_015312.1 PFAM: Glutaredoxin-like; KEGG: svi:Svir_02830 glutaredoxin-like domain (DUF836); glutaredoxin 2 5994437 10367478 Psed_5623 Pseudonocardia dioxanivorans CB1190 glutaredoxin 2 YP_004335604.1 5994195 R 675635 CDS YP_004335605.1 331699366 10367479 complement(5994489..5996117) 1 NC_015312.1 KEGG: sen:SACE_6950 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 5996117 10367479 Psed_5624 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004335605.1 5994489 R 675635 CDS YP_004335606.1 331699367 10367480 5996782..5997390 1 NC_015312.1 KEGG: ami:Amir_6736 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 5997390 10367480 Psed_5625 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004335606.1 5996782 D 675635 CDS YP_004335607.1 331699368 10367481 5997581..5999161 1 NC_015312.1 KEGG: ami:Amir_6737 hypothetical protein; hypothetical protein 5999161 10367481 Psed_5626 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335607.1 5997581 D 675635 CDS YP_004335608.1 331699369 10367482 5999311..6000249 1 NC_015312.1 KEGG: svi:Svir_02790 HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 6000249 10367482 Psed_5627 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004335608.1 5999311 D 675635 CDS YP_004335609.1 331699370 10367483 complement(6000307..6001776) 1 NC_015312.1 KEGG: ami:Amir_6739 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 6001776 10367483 Psed_5628 Pseudonocardia dioxanivorans CB1190 phospholipid/glycerol acyltransferase YP_004335609.1 6000307 R 675635 CDS YP_004335610.1 331699371 10367484 complement(6001773..6002810) 1 NC_015312.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ami:Amir_6740 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 6002810 10367484 Psed_5629 Pseudonocardia dioxanivorans CB1190 NAD-dependent epimerase/dehydratase YP_004335610.1 6001773 R 675635 CDS YP_004335611.1 331699372 10367485 complement(6003007..6003108) 1 NC_015312.1 PFAM: Domain of unknown function DUF1713, mitochondria; KEGG: sen:SACE_6957 hypothetical protein; hypothetical protein 6003108 10367485 Psed_5630 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335611.1 6003007 R 675635 CDS YP_004335612.1 331699373 10367486 complement(6003288..6003500) 1 NC_015312.1 KEGG: svi:Svir_02760 DNA-binding protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Prophage CP4-57 regulatory; excisionase 6003500 10367486 Psed_5631 Pseudonocardia dioxanivorans CB1190 excisionase YP_004335612.1 6003288 R 675635 CDS YP_004335613.1 331699374 10367487 complement(6003653..6004465) 1 NC_015312.1 TIGRFAM: Pyrroline-5-carboxylate reductase; KEGG: svi:Svir_02750 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase 6004465 10367487 Psed_5632 Pseudonocardia dioxanivorans CB1190 pyrroline-5-carboxylate reductase YP_004335613.1 6003653 R 675635 CDS YP_004335614.1 331699375 10367488 complement(6004864..6005718) 1 NC_015312.1 KEGG: amd:AMED_0465 aromatic compounds degradation protein PaaI; aromatic compounds degradation protein PaaI 6005718 10367488 Psed_5633 Pseudonocardia dioxanivorans CB1190 aromatic compounds degradation protein PaaI YP_004335614.1 6004864 R 675635 CDS YP_004335615.1 331699376 10367489 complement(6005715..6006650) 1 NC_015312.1 KEGG: saq:Sare_0409 proline dehydrogenase; PFAM: Proline dehydrogenase; proline dehydrogenase 6006650 10367489 Psed_5634 Pseudonocardia dioxanivorans CB1190 proline dehydrogenase YP_004335615.1 6005715 R 675635 CDS YP_004335616.1 331699377 10367490 complement(6006703..6007545) 1 NC_015312.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: ami:Amir_6746 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 6007545 10367490 Psed_5635 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004335616.1 6006703 R 675635 CDS YP_004335617.1 331699378 10367491 complement(6007551..6009014) 1 NC_015312.1 KEGG: sen:SACE_6963 hypothetical protein; hypothetical protein 6009014 10367491 Psed_5636 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335617.1 6007551 R 675635 CDS YP_004335618.1 331699379 10367492 complement(6009011..6010009) 1 NC_015312.1 PFAM: Ppx/GppA phosphatase; KEGG: ami:Amir_6748 Ppx/GppA phosphatase; Ppx/GppA phosphatase 6010009 10367492 Psed_5637 Pseudonocardia dioxanivorans CB1190 Ppx/GppA phosphatase YP_004335618.1 6009011 R 675635 CDS YP_004335619.1 331699380 10367493 complement(6010113..6010802) 1 NC_015312.1 KEGG: amd:AMED_0460 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6010802 10367493 Psed_5638 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335619.1 6010113 R 675635 CDS YP_004335620.1 331699381 10367494 complement(6010804..6012024) 1 NC_015312.1 KEGG: sen:SACE_6966 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 6012024 10367494 Psed_5639 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335620.1 6010804 R 675635 CDS YP_004335621.1 331699382 10367495 complement(6012175..6012915) 1 NC_015312.1 KEGG: svi:Svir_02670 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; SMART: Histidine phosphatase superfamily, clade-1; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 6012915 10367495 Psed_5640 Pseudonocardia dioxanivorans CB1190 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004335621.1 6012175 R 675635 CDS YP_004335622.1 331699383 10367496 complement(6012948..6013496) 1 NC_015312.1 KEGG: svi:Svir_14940 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 6013496 10367496 Psed_5641 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004335622.1 6012948 R 675635 CDS YP_004335623.1 331699384 10367497 6013591..6014100 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gob:Gobs_0101 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6014100 10367497 Psed_5642 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004335623.1 6013591 D 675635 CDS YP_004335624.1 331699385 10367498 complement(6014843..6015931) 1 NC_015312.1 KEGG: kra:Krad_3419 lipoprotein; lipoprotein 6015931 10367498 Psed_5643 Pseudonocardia dioxanivorans CB1190 lipoprotein YP_004335624.1 6014843 R 675635 CDS YP_004335625.1 331699386 10367499 complement(6016662..6017141) 1 NC_015312.1 PFAM: Protein of unknown function DUF2596; KEGG: svi:Svir_02660 protein of unknown function (DUF2596); hypothetical protein 6017141 10367499 Psed_5644 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335625.1 6016662 R 675635 CDS YP_004335626.1 331699387 10367500 complement(6017160..6018533) 1 NC_015312.1 KEGG: ami:Amir_6757 UDP-N-acetylglucosamine; TIGRFAM: Mycothiol biosynthesis protein, MshA; PFAM: Glycosyl transferase, group 1; D-inositol-3-phosphate glycosyltransferase 6018533 10367500 Psed_5645 Pseudonocardia dioxanivorans CB1190 D-inositol-3-phosphate glycosyltransferase YP_004335626.1 6017160 R 675635 CDS YP_004335627.1 331699388 10367501 complement(6018530..6021523) 1 NC_015312.1 KEGG: sen:SACE_0599 HSP90 family heat shock protein; heat shock protein 90 6021523 10367501 Psed_5646 Pseudonocardia dioxanivorans CB1190 heat shock protein 90 YP_004335627.1 6018530 R 675635 CDS YP_004335628.1 331699389 10367502 complement(6021562..6022395) 1 NC_015312.1 KEGG: amd:AMED_8485 hypothetical protein; hypothetical protein 6022395 10367502 Psed_5647 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335628.1 6021562 R 675635 CDS YP_004335629.1 331699390 10367503 6022424..6023185 1 NC_015312.1 PFAM: Glutamine cyclotransferase; KEGG: gob:Gobs_3145 glutamine cyclotransferase; glutamine cyclotransferase 6023185 10367503 Psed_5648 Pseudonocardia dioxanivorans CB1190 glutamine cyclotransferase YP_004335629.1 6022424 D 675635 CDS YP_004335630.1 331699391 10367504 6023207..6025195 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_0596 hypothetical protein; major facilitator superfamily protein 6025195 10367504 Psed_5649 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004335630.1 6023207 D 675635 CDS YP_004335631.1 331699392 10367505 6025219..6025698 1 NC_015312.1 KEGG: ami:Amir_0482 hypothetical protein; hypothetical protein 6025698 10367505 Psed_5650 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335631.1 6025219 D 675635 CDS YP_004335632.1 331699393 10367506 complement(6025714..6026184) 1 NC_015312.1 KEGG: svi:Svir_34040 cold-shock DNA-binding protein family; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 6026184 10367506 Psed_5651 Pseudonocardia dioxanivorans CB1190 cold-shock DNA-binding domain-containing protein YP_004335632.1 6025714 R 675635 CDS YP_004335633.1 331699394 10367507 complement(6026321..6027985) 1 NC_015312.1 KEGG: amd:AMED_1463 fatty-acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 6027985 10367507 Psed_5652 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004335633.1 6026321 R 675635 CDS YP_004335634.1 331699395 10367508 6028120..6029382 1 NC_015312.1 TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: sma:SAV_2294 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; seryl-tRNA synthetase 6029382 10367508 Psed_5653 Pseudonocardia dioxanivorans CB1190 seryl-tRNA synthetase YP_004335634.1 6028120 D 675635 CDS YP_004335635.1 331699396 10367509 complement(6029413..6030906) 1 NC_015312.1 KEGG: ami:Amir_3551 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; aqualysin 1 6030906 10367509 Psed_5654 Pseudonocardia dioxanivorans CB1190 aqualysin 1 YP_004335635.1 6029413 R 675635 CDS YP_004335636.1 331699397 10367510 complement(6031434..6032561) 1 NC_015312.1 PFAM: ABC transporter-like; Transport-associated OB, type 1; KEGG: sen:SACE_0573 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; molybdate-transporting ATPase 6032561 10367510 Psed_5655 Pseudonocardia dioxanivorans CB1190 molybdate-transporting ATPase YP_004335636.1 6031434 R 675635 CDS YP_004335637.1 331699398 10367511 complement(6032558..6033409) 1 NC_015312.1 KEGG: rop:ROP_34570 molybdate ABC transporter permease; TIGRFAM: NifC-like ABC-type porter; Molybdate ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; ABC transporter 6033409 10367511 Psed_5656 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004335637.1 6032558 R 675635 CDS YP_004335638.1 331699399 10367512 complement(6033458..6034249) 1 NC_015312.1 KEGG: kra:Krad_4177 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; molybdenum ABC transporter substrate-binding protein 6034249 10367512 Psed_5657 Pseudonocardia dioxanivorans CB1190 molybdenum ABC transporter substrate-binding protein YP_004335638.1 6033458 R 675635 CDS YP_004335639.1 331699400 10367513 complement(6034246..6034659) 1 NC_015312.1 KEGG: sen:SACE_0570 molybdate ABC molybdate transporter substrate-binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, MerR; molybdenum-pterin-binding protein 6034659 10367513 Psed_5658 Pseudonocardia dioxanivorans CB1190 molybdenum-pterin-binding protein YP_004335639.1 6034246 R 675635 CDS YP_004335640.1 331699401 10367514 6034720..6035925 1 NC_015312.1 manually curated; KEGG: fri:FraEuI1c_3837 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; (R)-benzylsuccinyl-CoA dehydrogenase 6035925 10367514 Psed_5659 Pseudonocardia dioxanivorans CB1190 (R)-benzylsuccinyl-CoA dehydrogenase YP_004335640.1 6034720 D 675635 CDS YP_004335641.1 331699402 10367515 6036015..6037187 1 NC_015312.1 TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; Molybdenum cofactor synthesis C-terminal; KEGG: amd:AMED_8516 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 6037187 10367515 Psed_5660 Pseudonocardia dioxanivorans CB1190 molybdenum cofactor biosynthesis protein A YP_004335641.1 6036015 D 675635 CDS YP_004335642.1 331699403 10367516 6037202..6037474 1 NC_015312.1 PFAM: ThiamineS; KEGG: mjl:Mjls_4861 thiamineS protein; sulfur carrier protein ThiS 6037474 10367516 Psed_5661 Pseudonocardia dioxanivorans CB1190 sulfur carrier protein ThiS YP_004335642.1 6037202 D 675635 CDS YP_004335643.1 331699404 10367517 complement(6037538..6038554) 1 NC_015312.1 PFAM: Peptidase S58, DmpA; KEGG: sco:SCO3193 hypothetical protein; peptidase S58 DmpA 6038554 10367517 Psed_5662 Pseudonocardia dioxanivorans CB1190 peptidase S58 DmpA YP_004335643.1 6037538 R 675635 CDS YP_004335644.1 331699405 10367518 complement(6038601..6039353) 1 NC_015312.1 KEGG: amd:AMED_7888 hypothetical protein; hypothetical protein 6039353 10367518 Psed_5663 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335644.1 6038601 R 675635 CDS YP_004335645.1 331699406 10367519 complement(6039395..6039883) 1 NC_015312.1 KEGG: sro:Sros_5448 hypothetical protein; hypothetical protein 6039883 10367519 Psed_5664 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335645.1 6039395 R 675635 CDS YP_004335646.1 331699407 10367520 6039986..6040666 1 NC_015312.1 KEGG: sro:Sros_2243 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6040666 10367520 Psed_5665 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335646.1 6039986 D 675635 CDS YP_004335647.1 331699408 10367521 6040670..6041941 1 NC_015312.1 KEGG: sro:Sros_2242 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; histidine kinase 6041941 10367521 Psed_5666 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335647.1 6040670 D 675635 CDS YP_004335648.1 331699409 10367522 complement(6042183..6042884) 1 NC_015312.1 KEGG: sma:SAV_6344 hypothetical protein; hypothetical protein 6042884 10367522 Psed_5667 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335648.1 6042183 R 675635 CDS YP_004335649.1 331699410 10367523 complement(6042881..6043093) 1 NC_015312.1 hypothetical protein 6043093 10367523 Psed_5668 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335649.1 6042881 R 675635 CDS YP_004335650.1 331699411 10367524 complement(6044220..6044843) 1 NC_015312.1 PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: kfl:Kfla_5825 superoxide dismutase; manganese/iron superoxide dismutase 6044843 10367524 Psed_5669 Pseudonocardia dioxanivorans CB1190 manganese/iron superoxide dismutase YP_004335650.1 6044220 R 675635 CDS YP_004335651.1 331699412 10367526 complement(6045640..6046419) 1 NC_015312.1 PFAM: PASTA; KEGG: fri:FraEuI1c_0501 serine/threonine protein kinase with PASTA sensor(s); protein PASTA domain-containing protein 6046419 10367526 Psed_5671 Pseudonocardia dioxanivorans CB1190 protein PASTA domain-containing protein YP_004335651.1 6045640 R 675635 CDS YP_004335652.1 331699413 10367527 6046813..6047190 1 NC_015312.1 KEGG: amd:AMED_7281 hypothetical protein; hypothetical protein 6047190 10367527 Psed_5672 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335652.1 6046813 D 675635 CDS YP_004335653.1 331699414 10367528 complement(6047989..6048735) 1 NC_015312.1 PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: gob:Gobs_4922 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 6048735 10367528 Psed_5673 Pseudonocardia dioxanivorans CB1190 carbon monoxide dehydrogenase subunit G YP_004335653.1 6047989 R 675635 CDS YP_004335654.1 331699415 10367529 complement(6048854..6049705) 1 NC_015312.1 KEGG: sen:SACE_0538 carbon monoxide dehydrogenase medium subunit; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 6049705 10367529 Psed_5674 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335654.1 6048854 R 675635 CDS YP_004335655.1 331699416 10367530 complement(6049702..6052179) 1 NC_015312.1 KEGG: amd:AMED_1871 carbon-monoxide dehydrogenase large subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 6052179 10367530 Psed_5675 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335655.1 6049702 R 675635 CDS YP_004335656.1 331699417 10367531 complement(6052181..6052696) 1 NC_015312.1 KEGG: svi:Svir_13110 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 6052696 10367531 Psed_5676 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335656.1 6052181 R 675635 CDS YP_004335657.1 331699418 10367532 complement(6052965..6054479) 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: gob:Gobs_4928 family 2 glycosyl transferase; family 2 glycosyl transferase 6054479 10367532 Psed_5677 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004335657.1 6052965 R 675635 CDS YP_004335658.1 331699419 10367533 6054558..6055703 1 NC_015312.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: nfa:nfa26840 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 6055703 10367533 Psed_5678 Pseudonocardia dioxanivorans CB1190 type I phosphodiesterase/nucleotide pyrophosphatase YP_004335658.1 6054558 D 675635 CDS YP_004335659.1 331699420 10367534 complement(6055810..6056535) 1 NC_015312.1 PFAM: Creatininase; KEGG: rop:ROP_61350 creatininase protein; creatininase 6056535 10367534 Psed_5679 Pseudonocardia dioxanivorans CB1190 creatininase YP_004335659.1 6055810 R 675635 CDS YP_004335660.1 331699421 10367535 complement(6056545..6060399) 1 NC_015312.1 KEGG: fal:FRAAL4319 hypothetical protein; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 2,4-dienoyl-CoA reductase 6060399 10367535 Psed_5680 Pseudonocardia dioxanivorans CB1190 2,4-dienoyl-CoA reductase YP_004335660.1 6056545 R 675635 CDS YP_004335661.1 331699422 10367536 complement(6060455..6061687) 1 NC_015312.1 KEGG: rha:RHA1_ro06072 coenzyme synthesis protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein 6061687 10367536 Psed_5681 Pseudonocardia dioxanivorans CB1190 Radical SAM domain-containing protein YP_004335661.1 6060455 R 675635 CDS YP_004335662.1 331699423 10367537 complement(6061700..6062008) 1 NC_015312.1 KEGG: nfa:nfa34420 hypothetical protein; hypothetical protein 6062008 10367537 Psed_5682 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335662.1 6061700 R 675635 CDS YP_004335663.1 331699424 10367538 complement(6061998..6062105) 1 NC_015312.1 hypothetical protein 6062105 10367538 Psed_5683 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335663.1 6061998 R 675635 CDS YP_004335664.1 331699425 10367539 6062263..6063411 1 NC_015312.1 PFAM: Protein of unknown function DUF952; GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gob:Gobs_3986 hypothetical protein; hypothetical protein 6063411 10367539 Psed_5684 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335664.1 6062263 D 675635 CDS YP_004335665.1 331699426 10367540 6063500..6064480 1 NC_015312.1 KEGG: fri:FraEuI1c_5323 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-hydroxyacyl-CoA dehydrogenase 6064480 10367540 Psed_5685 Pseudonocardia dioxanivorans CB1190 3-hydroxyacyl-CoA dehydrogenase YP_004335665.1 6063500 D 675635 CDS YP_004335666.1 331699427 10367541 complement(6064493..6065251) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_24720 oxidoreductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 6065251 10367541 Psed_5686 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004335666.1 6064493 R 675635 CDS YP_004335667.1 331699428 10367542 complement(6065248..6067200) 1 NC_015312.1 KEGG: mil:ML5_4663 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 2,4-dienoyl-CoA reductase 6067200 10367542 Psed_5687 Pseudonocardia dioxanivorans CB1190 2,4-dienoyl-CoA reductase YP_004335667.1 6065248 R 675635 CDS YP_004335668.1 331699429 10367543 complement(6067374..6068132) 1 NC_015312.1 KEGG: amd:AMED_5932 hypothetical protein; hypothetical protein 6068132 10367543 Psed_5688 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335668.1 6067374 R 675635 CDS YP_004335669.1 331699430 10367544 complement(6068277..6069500) 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; KEGG: rop:ROP_04120 two-component histidine kinase; histidine kinase 6069500 10367544 Psed_5689 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335669.1 6068277 R 675635 CDS YP_004335670.1 331699431 10367545 6069569..6070216 1 NC_015312.1 KEGG: nml:Namu_0487 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6070216 10367545 Psed_5690 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335670.1 6069569 D 675635 CDS YP_004335671.1 331699432 10367546 complement(6070232..6071050) 1 NC_015312.1 PFAM: Glycoside hydrolase, family 16; KEGG: mil:ML5_5027 glycoside hydrolase 16; glycoside hydrolase protein 6071050 10367546 Psed_5691 Pseudonocardia dioxanivorans CB1190 glycoside hydrolase protein YP_004335671.1 6070232 R 675635 CDS YP_004335672.1 331699433 10367547 complement(6071047..6071814) 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: amd:AMED_1392 predicted xylanase/chitin deacetylase; polysaccharide deacetylase 6071814 10367547 Psed_5692 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004335672.1 6071047 R 675635 CDS YP_004335673.1 331699434 10367548 complement(6071814..6071966) 1 NC_015312.1 hypothetical protein 6071966 10367548 Psed_5693 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335673.1 6071814 R 675635 CDS YP_004335674.1 331699435 10367549 complement(6072054..6073589) 1 NC_015312.1 PFAM: Glycosyl transferase, family 2; KEGG: art:Arth_3658 glycosyl transferase protein; family 2 glycosyl transferase 6073589 10367549 Psed_5694 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004335674.1 6072054 R 675635 CDS YP_004335675.1 331699436 10367550 complement(6073913..6074224) 1 NC_015312.1 hypothetical protein 6074224 10367550 Psed_5695 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335675.1 6073913 R 675635 CDS YP_004335676.1 331699437 10367551 complement(6074420..6074935) 1 NC_015312.1 PFAM: Peptidoglycan binding-like; peptidoglycan-binding domain 1 protein 6074935 10367551 Psed_5696 Pseudonocardia dioxanivorans CB1190 peptidoglycan-binding domain 1 protein YP_004335676.1 6074420 R 675635 CDS YP_004335677.1 331699438 10367552 complement(6075239..6076054) 1 NC_015312.1 KEGG: gob:Gobs_4663 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 6076054 10367552 Psed_5697 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335677.1 6075239 R 675635 CDS YP_004335678.1 331699439 10367553 complement(6076051..6076617) 1 NC_015312.1 KEGG: gob:Gobs_4664 (2Fe-2S)-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 6076617 10367553 Psed_5698 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335678.1 6076051 R 675635 CDS YP_004335679.1 331699440 10367554 complement(6076614..6078884) 1 NC_015312.1 KEGG: gob:Gobs_4665 aldehyde oxidase/xanthine dehydrogenase; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 6078884 10367554 Psed_5699 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335679.1 6076614 R 675635 CDS YP_004335680.1 331699441 10367555 complement(6079114..6079947) 1 NC_015312.1 PFAM: Phosphomethylpyrimidine kinase type-1; manually curated; KEGG: ami:Amir_0424 phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2; phosphomethylpyrimidine kinase 6079947 10367555 Psed_5700 Pseudonocardia dioxanivorans CB1190 phosphomethylpyrimidine kinase YP_004335680.1 6079114 R 675635 CDS YP_004335681.1 331699442 10367556 6080276..6080710 1 NC_015312.1 KEGG: mav:MAV_0120 hypothetical protein; hypothetical protein 6080710 10367556 Psed_5701 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335681.1 6080276 D 675635 CDS YP_004335682.1 331699443 10367557 complement(6080780..6083023) 1 NC_015312.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: ami:Amir_4048 protein of unknown function DUF214; hypothetical protein 6083023 10367557 Psed_5702 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335682.1 6080780 R 675635 CDS YP_004335683.1 331699444 10367558 complement(6083020..6083760) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: kfl:Kfla_5714 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 6083760 10367558 Psed_5703 Pseudonocardia dioxanivorans CB1190 phosphonate-transporting ATPase YP_004335683.1 6083020 R 675635 CDS YP_004335684.1 331699445 10367559 complement(6083757..6083867) 1 NC_015312.1 hypothetical protein 6083867 10367559 Psed_5704 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335684.1 6083757 R 675635 CDS YP_004335685.1 331699446 10367560 6083988..6085148 1 NC_015312.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: ami:Amir_4000 histidine kinase; histidine kinase 6085148 10367560 Psed_5705 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335685.1 6083988 D 675635 CDS YP_004335686.1 331699447 10367561 6085171..6085806 1 NC_015312.1 KEGG: sro:Sros_7377 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6085806 10367561 Psed_5706 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335686.1 6085171 D 675635 CDS YP_004335687.1 331699448 10367562 complement(6085845..6086744) 1 NC_015312.1 KEGG: amd:AMED_8570 serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 6086744 10367562 Psed_5707 Pseudonocardia dioxanivorans CB1190 peptidase S1 and S6 chymotrypsin/Hap YP_004335687.1 6085845 R 675635 CDS YP_004335688.1 331699449 10367563 complement(6086810..6087382) 1 NC_015312.1 PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: sen:SACE_0514 polypeptide deformylase; peptide deformylase 6087382 10367563 Psed_5708 Pseudonocardia dioxanivorans CB1190 peptide deformylase YP_004335688.1 6086810 R 675635 CDS YP_004335689.1 331699450 10367564 6087637..6087942 1 NC_015312.1 KEGG: gbr:Gbro_0662 hypothetical protein; hypothetical protein 6087942 10367564 Psed_5709 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335689.1 6087637 D 675635 CDS YP_004335690.1 331699451 10367565 6088000..6088695 1 NC_015312.1 KEGG: amd:AMED_8566 hypothetical protein; hypothetical protein 6088695 10367565 Psed_5710 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335690.1 6088000 D 675635 CDS YP_004335691.1 331699452 10367566 complement(6088781..6091189) 1 NC_015312.1 PFAM: ATPase, AAA-type, core; KEGG: ami:Amir_0432 microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; Microtubule-severing ATPase 6091189 10367566 Psed_5711 Pseudonocardia dioxanivorans CB1190 Microtubule-severing ATPase YP_004335691.1 6088781 R 675635 CDS YP_004335692.1 331699453 10367567 complement(6091258..6092244) 1 NC_015312.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: amd:AMED_8564 phosphatidylserine synthase; CDP-alcohol phosphatidyltransferase 6092244 10367567 Psed_5712 Pseudonocardia dioxanivorans CB1190 CDP-alcohol phosphatidyltransferase YP_004335692.1 6091258 R 675635 CDS YP_004335693.1 331699454 10367568 complement(6092241..6092963) 1 NC_015312.1 PFAM: Phosphatidylserine decarboxylase-related; TIGRFAM: Phosphatidylserine decarboxylase-related protein; HAMAP: Phosphatidylserine decarboxylase-related protein; KEGG: amd:AMED_8563 phosphatidylserine decarboxylase; phosphatidylserine decarboxylase proenzyme 6092963 10367568 Psed_5713 Pseudonocardia dioxanivorans CB1190 phosphatidylserine decarboxylase proenzyme YP_004335693.1 6092241 R 675635 CDS YP_004335694.1 331699455 10367569 complement(6093399..6094640) 1 NC_015312.1 TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; KEGG: ami:Amir_0438 molybdenum cofactor synthesis domain protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 6094640 10367569 Psed_5714 Pseudonocardia dioxanivorans CB1190 molybdenum cofactor synthesis domain-containing protein YP_004335694.1 6093399 R 675635 CDS YP_004335695.1 331699456 10367570 6094748..6094951 1 NC_015312.1 KEGG: ami:Amir_0440 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 6094951 10367570 Psed_5715 Pseudonocardia dioxanivorans CB1190 cold-shock DNA-binding domain-containing protein YP_004335695.1 6094748 D 675635 CDS YP_004335696.1 331699457 10367571 6095242..6096870 1 NC_015312.1 TIGRFAM: Chaperonin Cpn60; HAMAP: Chaperonin Cpn60; KEGG: nml:Namu_4827 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 6096870 10367571 Psed_5716 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroEL YP_004335696.1 6095242 D 675635 CDS YP_004335697.1 331699458 10367572 complement(6097013..6097960) 1 NC_015312.1 KEGG: rop:ROP_43410 DeoR family transcriptional regulator; DeoR family transcriptional regulator 6097960 10367572 Psed_5717 Pseudonocardia dioxanivorans CB1190 DeoR family transcriptional regulator YP_004335697.1 6097013 R 675635 CDS YP_004335698.1 331699459 10367573 6098023..6098613 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: rop:ROP_43400 hypothetical protein; hypothetical protein 6098613 10367573 Psed_5718 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335698.1 6098023 D 675635 CDS YP_004335699.1 331699460 10367574 6098815..6100050 1 NC_015312.1 PFAM: Low temperature requirement A; KEGG: rha:RHA1_ro04267 low temperature requirement protein A; low temperature requirement A 6100050 10367574 Psed_5719 Pseudonocardia dioxanivorans CB1190 low temperature requirement A YP_004335699.1 6098815 D 675635 CDS YP_004335700.1 331699461 10367575 complement(6100077..6100376) 1 NC_015312.1 PFAM: Phage shock domain; KEGG: ami:Amir_0450 phage shock protein C, PspC; phage shock protein C, PspC 6100376 10367575 Psed_5720 Pseudonocardia dioxanivorans CB1190 phage shock protein C, PspC YP_004335700.1 6100077 R 675635 CDS YP_004335701.1 331699462 10367576 complement(6100462..6100791) 1 NC_015312.1 hypothetical protein 6100791 10367576 Psed_5721 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335701.1 6100462 R 675635 CDS YP_004335702.1 331699463 10367577 complement(6100910..6101155) 1 NC_015312.1 hypothetical protein 6101155 10367577 Psed_5722 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335702.1 6100910 R 675635 CDS YP_004335703.1 331699464 10367578 complement(6101253..6102914) 1 NC_015312.1 KEGG: sen:SACE_0545 ATP-dependent DNA helicase; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; type III restriction protein res subunit 6102914 10367578 Psed_5723 Pseudonocardia dioxanivorans CB1190 type III restriction protein res subunit YP_004335703.1 6101253 R 675635 CDS YP_004335704.1 331699465 10367579 6103391..6108727 1 NC_015312.1 KEGG: amd:AMED_2491 histidine kinase-like ATPase containing nitrate/nitrite sensor domain; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; histidine kinase 6108727 10367579 Psed_5724 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335704.1 6103391 D 675635 CDS YP_004335705.1 331699466 10367580 6108724..6109146 1 NC_015312.1 KEGG: svi:Svir_24600 hypothetical protein; PFAM: Dynein light chain-related; SMART: Dynein light chain-related; Roadblock/LC7 family protein 6109146 10367580 Psed_5725 Pseudonocardia dioxanivorans CB1190 Roadblock/LC7 family protein YP_004335705.1 6108724 D 675635 CDS YP_004335706.1 331699467 10367581 6109223..6110143 1 NC_015312.1 PFAM: Protein of unknown function DUF742; KEGG: sen:SACE_0559 hypothetical protein; hypothetical protein 6110143 10367581 Psed_5726 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335706.1 6109223 D 675635 CDS YP_004335707.1 331699468 10367582 6110124..6110720 1 NC_015312.1 PFAM: Uncharacterised protein family, ATP binding; KEGG: ami:Amir_0461 protein of unknown function ATP binding; hypothetical protein 6110720 10367582 Psed_5727 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335707.1 6110124 D 675635 CDS YP_004335708.1 331699469 10367583 complement(6110753..6111343) 1 NC_015312.1 manually curated; KEGG: tcu:Tcur_2634 hypothetical protein; hypothetical protein 6111343 10367583 Psed_5728 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335708.1 6110753 R 675635 CDS YP_004335709.1 331699470 10367584 complement(6111340..6113592) 1 NC_015312.1 KEGG: sen:SACE_0561 hypothetical protein; hypothetical protein 6113592 10367584 Psed_5729 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335709.1 6111340 R 675635 CDS YP_004335710.1 331699471 10367585 6113699..6113878 1 NC_015312.1 KEGG: sen:SACE_0562 hypothetical protein; hypothetical protein 6113878 10367585 Psed_5730 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335710.1 6113699 D 675635 CDS YP_004335711.1 331699472 10367586 6113880..6114476 1 NC_015312.1 KEGG: amd:AMED_1865 hypothetical protein; hypothetical protein 6114476 10367586 Psed_5731 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335711.1 6113880 D 675635 CDS YP_004335712.1 331699473 10367587 complement(6114548..6115249) 1 NC_015312.1 PFAM: Transglycosylase-like; Peptidoglycan-binding lysin domain; KEGG: amd:AMED_8518 secreted protein; transglycosylase-like domain-containing protein 6115249 10367587 Psed_5732 Pseudonocardia dioxanivorans CB1190 transglycosylase-like domain-containing protein YP_004335712.1 6114548 R 675635 CDS YP_004335713.1 331699474 10367588 6115690..6116169 1 NC_015312.1 KEGG: sen:SACE_0564 molybdenum cofactor biosynthesis protein; TIGRFAM: Molybdenum cofactor biosynthesis C; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain; molybdenum cofactor biosynthesis protein C 6116169 10367588 Psed_5733 Pseudonocardia dioxanivorans CB1190 molybdenum cofactor biosynthesis protein C YP_004335713.1 6115690 D 675635 CDS YP_004335714.1 331699475 10367589 6116166..6116654 1 NC_015312.1 TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: ami:Amir_0467 molybdenum cofactor synthesis domain protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 6116654 10367589 Psed_5734 Pseudonocardia dioxanivorans CB1190 molybdenum cofactor synthesis domain-containing protein YP_004335714.1 6116166 D 675635 CDS YP_004335715.1 331699476 10367590 6116654..6117082 1 NC_015312.1 PFAM: Molybdopterin biosynthesis MoaE; KEGG: ami:Amir_0468 molybdopterin biosynthesis MoaE protein; molybdopterin biosynthesis MoaE protein 6117082 10367590 Psed_5735 Pseudonocardia dioxanivorans CB1190 molybdopterin biosynthesis MoaE protein YP_004335715.1 6116654 D 675635 CDS YP_004335716.1 331699477 10367591 complement(6117189..6117797) 1 NC_015312.1 KEGG: rsa:RSal33209_2532 transglycosylase protein; PFAM: Transglycosylase-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; transglycosylase-like domain-containing protein 6117797 10367591 Psed_5736 Pseudonocardia dioxanivorans CB1190 transglycosylase-like domain-containing protein YP_004335716.1 6117189 R 675635 CDS YP_004335717.1 331699478 10367592 6118355..6119257 1 NC_015312.1 KEGG: rop:ROP_50460 hypothetical protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 6119257 10367592 Psed_5737 Pseudonocardia dioxanivorans CB1190 ATPase YP_004335717.1 6118355 D 675635 CDS YP_004335718.1 331699479 10367593 6119275..6120423 1 NC_015312.1 KEGG: svi:Svir_13090 protein containing von Willebrand factor type A (vWA) domain protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A; von Willebrand factor A 6120423 10367593 Psed_5738 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004335718.1 6119275 D 675635 CDS YP_004335719.1 331699480 10367594 6120416..6121543 1 NC_015312.1 PFAM: XdhC- CoxI; KEGG: gob:Gobs_4952 hypothetical protein; XshC-Cox1-family protein 6121543 10367594 Psed_5739 Pseudonocardia dioxanivorans CB1190 XshC-Cox1-family protein YP_004335719.1 6120416 D 675635 CDS YP_004335720.1 331699481 10367595 complement(6121566..6122600) 1 NC_015312.1 KEGG: nca:Noca_1906 hypothetical protein; PFAM: GerMN domain; Spore germination protein-like Gmad2, bacteria; SMART: GerMN domain; lipoprotein LpqB, GerMN domain-containing protein 6122600 10367595 Psed_5740 Pseudonocardia dioxanivorans CB1190 lipoprotein LpqB, GerMN domain-containing protein YP_004335720.1 6121566 R 675635 CDS YP_004335721.1 331699482 10367596 6122606..6123154 1 NC_015312.1 KEGG: gob:Gobs_2268 hypothetical protein; hypothetical protein 6123154 10367596 Psed_5741 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335721.1 6122606 D 675635 CDS YP_004335722.1 331699483 10367597 complement(6123170..6123940) 1 NC_015312.1 KEGG: sen:SACE_0508 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis; thiazole synthase 6123940 10367597 Psed_5742 Pseudonocardia dioxanivorans CB1190 thiazole synthase YP_004335722.1 6123170 R 675635 CDS YP_004335723.1 331699484 10367598 complement(6123946..6124146) 1 NC_015312.1 KEGG: sro:Sros_2782 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS; thiamine biosynthesis protein ThiS 6124146 10367598 Psed_5743 Pseudonocardia dioxanivorans CB1190 thiamine biosynthesis protein ThiS YP_004335723.1 6123946 R 675635 CDS YP_004335724.1 331699485 10367599 complement(6124143..6125288) 1 NC_015312.1 KEGG: sen:SACE_0506 amino acid oxidase flavoprotein ThiO, TIGRFAM: Glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; glycine oxidase ThiO 6125288 10367599 Psed_5744 Pseudonocardia dioxanivorans CB1190 glycine oxidase ThiO YP_004335724.1 6124143 R 675635 CDS YP_004335725.1 331699486 10367600 6125420..6126085 1 NC_015312.1 PFAM: Thiamine monophosphate synthase; TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine monophosphate synthase; KEGG: amd:AMED_8579 thiamine-phosphate pyrophosphorylase; thiamine-phosphate pyrophosphorylase 6126085 10367600 Psed_5745 Pseudonocardia dioxanivorans CB1190 thiamine-phosphate pyrophosphorylase YP_004335725.1 6125420 D 675635 CDS YP_004335726.1 331699487 10367601 complement(6126119..6127147) 1 NC_015312.1 KEGG: gob:Gobs_1366 hypothetical protein; hypothetical protein 6127147 10367601 Psed_5746 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335726.1 6126119 R 675635 CDS YP_004335727.1 331699488 10367602 6128032..6128298 1 NC_015312.1 hypothetical protein 6128298 10367602 Psed_5747 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335727.1 6128032 D 675635 CDS YP_004335728.1 331699489 10367603 6128378..6128794 1 NC_015312.1 hypothetical protein 6128794 10367603 Psed_5748 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335728.1 6128378 D 675635 CDS YP_004335729.1 331699490 10367604 6128791..6129003 1 NC_015312.1 hypothetical protein 6129003 10367604 Psed_5749 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335729.1 6128791 D 675635 CDS YP_004335730.1 331699491 10367605 6129000..6129410 1 NC_015312.1 hypothetical protein 6129410 10367605 Psed_5750 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335730.1 6129000 D 675635 CDS YP_004335731.1 331699492 10367606 6129410..6129919 1 NC_015312.1 hypothetical protein 6129919 10367606 Psed_5751 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335731.1 6129410 D 675635 CDS YP_004335732.1 331699493 10367607 6129916..6130440 1 NC_015312.1 KEGG: eba:ebA7261 hypothetical protein; hypothetical protein 6130440 10367607 Psed_5752 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335732.1 6129916 D 675635 CDS YP_004335733.1 331699494 10367608 6130437..6131288 1 NC_015312.1 hypothetical protein 6131288 10367608 Psed_5753 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335733.1 6130437 D 675635 CDS YP_004335734.1 331699495 10367609 6131285..6131596 1 NC_015312.1 hypothetical protein 6131596 10367609 Psed_5754 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335734.1 6131285 D 675635 CDS YP_004335735.1 331699496 10367610 6131635..6132636 1 NC_015312.1 hypothetical protein 6132636 10367610 Psed_5755 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335735.1 6131635 D 675635 CDS YP_004335736.1 331699497 10367611 6132694..6132927 1 NC_015312.1 hypothetical protein 6132927 10367611 Psed_5756 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335736.1 6132694 D 675635 CDS YP_004335737.1 331699498 10367612 6133127..6133744 1 NC_015312.1 hypothetical protein 6133744 10367612 Psed_5757 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335737.1 6133127 D 675635 CDS YP_004335738.1 331699499 10367613 6133741..6134133 1 NC_015312.1 hypothetical protein 6134133 10367613 Psed_5758 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335738.1 6133741 D 675635 CDS YP_004335739.1 331699500 10367614 6134133..6134378 1 NC_015312.1 hypothetical protein 6134378 10367614 Psed_5759 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335739.1 6134133 D 675635 CDS YP_004335740.1 331699501 10367615 6134375..6134683 1 NC_015312.1 hypothetical protein 6134683 10367615 Psed_5760 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335740.1 6134375 D 675635 CDS YP_004335741.1 331699502 10367616 6134680..6134976 1 NC_015312.1 hypothetical protein 6134976 10367616 Psed_5761 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335741.1 6134680 D 675635 CDS YP_004335742.1 331699503 10367617 6134973..6135272 1 NC_015312.1 hypothetical protein 6135272 10367617 Psed_5762 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335742.1 6134973 D 675635 CDS YP_004335743.1 331699504 10367618 6135269..6135808 1 NC_015312.1 KEGG: car:cauri_1937 hypothetical protein; hypothetical protein 6135808 10367618 Psed_5763 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335743.1 6135269 D 675635 CDS YP_004335744.1 331699505 10367619 6135805..6136305 1 NC_015312.1 hypothetical protein 6136305 10367619 Psed_5764 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335744.1 6135805 D 675635 CDS YP_004335745.1 331699506 10367620 6136302..6137036 1 NC_015312.1 hypothetical protein 6137036 10367620 Psed_5765 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335745.1 6136302 D 675635 CDS YP_004335746.1 331699507 10367621 6137033..6137335 1 NC_015312.1 hypothetical protein 6137335 10367621 Psed_5766 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335746.1 6137033 D 675635 CDS YP_004335747.1 331699508 10367622 6137337..6137603 1 NC_015312.1 hypothetical protein 6137603 10367622 Psed_5767 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335747.1 6137337 D 675635 CDS YP_004335748.1 331699509 10367623 6137600..6138127 1 NC_015312.1 hypothetical protein 6138127 10367623 Psed_5768 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335748.1 6137600 D 675635 CDS YP_004335749.1 331699510 10367624 6138311..6139207 1 NC_015312.1 hypothetical protein 6139207 10367624 Psed_5769 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335749.1 6138311 D 675635 CDS YP_004335750.1 331699511 10367625 6139204..6139572 1 NC_015312.1 hypothetical protein 6139572 10367625 Psed_5770 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335750.1 6139204 D 675635 CDS YP_004335751.1 331699512 10367626 complement(6139576..6140112) 1 NC_015312.1 KEGG: cyp:PCC8801_3065 hypothetical protein; hypothetical protein 6140112 10367626 Psed_5771 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335751.1 6139576 R 675635 CDS YP_004335752.1 331699513 10367627 complement(6140090..6141121) 1 NC_015312.1 KEGG: cyp:PCC8801_3064 hypothetical protein; hypothetical protein 6141121 10367627 Psed_5772 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335752.1 6140090 R 675635 CDS YP_004335753.1 331699514 10367628 complement(6141276..6141566) 1 NC_015312.1 hypothetical protein 6141566 10367628 Psed_5773 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335753.1 6141276 R 675635 CDS YP_004335754.1 331699515 10367629 6141647..6141925 1 NC_015312.1 hypothetical protein 6141925 10367629 Psed_5774 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335754.1 6141647 D 675635 CDS YP_004335755.1 331699516 10367630 6142047..6142151 1 NC_015312.1 hypothetical protein 6142151 10367630 Psed_5775 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335755.1 6142047 D 675635 CDS YP_004335756.1 331699517 10367631 6142148..6142933 1 NC_015312.1 KEGG: kfl:Kfla_3342 hypothetical protein; hypothetical protein 6142933 10367631 Psed_5776 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335756.1 6142148 D 675635 CDS YP_004335757.1 331699518 10367632 6142930..6143229 1 NC_015312.1 hypothetical protein 6143229 10367632 Psed_5777 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335757.1 6142930 D 675635 CDS YP_004335758.1 331699519 10367633 6143193..6145211 1 NC_015312.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fre:Franean1_1448 cell divisionFtsK/SpoIIIE; DNA translocase FtsK 6145211 10367633 Psed_5778 Pseudonocardia dioxanivorans CB1190 DNA translocase FtsK YP_004335758.1 6143193 D 675635 CDS YP_004335759.1 331699520 10367634 6145208..6145465 1 NC_015312.1 KEGG: kfl:Kfla_0389 hypothetical protein; hypothetical protein 6145465 10367634 Psed_5779 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335759.1 6145208 D 675635 CDS YP_004335760.1 331699521 10367635 6145567..6145971 1 NC_015312.1 KEGG: scb:SCAB_48371 hypothetical protein; hypothetical protein 6145971 10367635 Psed_5780 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335760.1 6145567 D 675635 CDS YP_004335761.1 331699522 10367636 6145968..6146162 1 NC_015312.1 hypothetical protein 6146162 10367636 Psed_5781 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335761.1 6145968 D 675635 CDS YP_004335762.1 331699523 10367637 6146836..6147840 1 NC_015312.1 PFAM: Collagen triple helix repeat; KEGG: mno:Mnod_2610 collagen triple helix repeat protein; collagen triple helix repeat-containing protein 6147840 10367637 Psed_5782 Pseudonocardia dioxanivorans CB1190 collagen triple helix repeat-containing protein YP_004335762.1 6146836 D 675635 CDS YP_004335763.1 331699524 10367638 6147840..6148406 1 NC_015312.1 KEGG: cwo:Cwoe_0556 carbohydrate-binding CenC domain protein; hypothetical protein 6148406 10367638 Psed_5783 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335763.1 6147840 D 675635 CDS YP_004335764.1 331699525 10367639 6148406..6148720 1 NC_015312.1 KEGG: mva:Mvan_3608 hypothetical protein; hypothetical protein 6148720 10367639 Psed_5784 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335764.1 6148406 D 675635 CDS YP_004335765.1 331699526 10367640 6149097..6149621 1 NC_015312.1 KEGG: stp:Strop_1047 hypothetical protein; hypothetical protein 6149621 10367640 Psed_5785 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335765.1 6149097 D 675635 CDS YP_004335766.1 331699527 10367641 6149560..6151134 1 NC_015312.1 KEGG: scb:SCAB_48281 phage terminase; phage terminase 6151134 10367641 Psed_5786 Pseudonocardia dioxanivorans CB1190 phage terminase YP_004335766.1 6149560 D 675635 CDS YP_004335767.1 331699528 10367642 6151154..6152407 1 NC_015312.1 KEGG: cef:CE0842 hypothetical protein; hypothetical protein 6152407 10367642 Psed_5787 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335767.1 6151154 D 675635 CDS YP_004335768.1 331699529 10367643 6152404..6153705 1 NC_015312.1 PFAM: Peptidase S14, ClpP; KEGG: ppr:PBPRB1287 hypothetical protein; peptidase S14 ClpP 6153705 10367643 Psed_5788 Pseudonocardia dioxanivorans CB1190 peptidase S14 ClpP YP_004335768.1 6152404 D 675635 CDS YP_004335769.1 331699530 10367644 6153709..6154080 1 NC_015312.1 KEGG: lxx:Lxx03890 hypothetical protein; hypothetical protein 6154080 10367644 Psed_5789 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335769.1 6153709 D 675635 CDS YP_004335770.1 331699531 10367645 6154093..6155016 1 NC_015312.1 KEGG: lxx:Lxx03880 hypothetical protein; hypothetical protein 6155016 10367645 Psed_5790 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335770.1 6154093 D 675635 CDS YP_004335771.1 331699532 10367646 6155016..6155330 1 NC_015312.1 KEGG: mav:MAV_0808 hypothetical protein; hypothetical protein 6155330 10367646 Psed_5791 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335771.1 6155016 D 675635 CDS YP_004335772.1 331699533 10367647 6155340..6155786 1 NC_015312.1 hypothetical protein 6155786 10367647 Psed_5792 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335772.1 6155340 D 675635 CDS YP_004335773.1 331699534 10367648 6155783..6156262 1 NC_015312.1 hypothetical protein 6156262 10367648 Psed_5793 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335773.1 6155783 D 675635 CDS YP_004335774.1 331699535 10367649 6156332..6156517 1 NC_015312.1 hypothetical protein 6156517 10367649 Psed_5794 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335774.1 6156332 D 675635 CDS YP_004335775.1 331699536 10367650 6156521..6157015 1 NC_015312.1 hypothetical protein 6157015 10367650 Psed_5795 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335775.1 6156521 D 675635 CDS YP_004335776.1 331699537 10367651 6157017..6157391 1 NC_015312.1 hypothetical protein 6157391 10367651 Psed_5796 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335776.1 6157017 D 675635 CDS YP_004335777.1 331699538 10367652 6157418..6157723 1 NC_015312.1 hypothetical protein 6157723 10367652 Psed_5797 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335777.1 6157418 D 675635 CDS YP_004335778.1 331699539 10367653 6157737..6158234 1 NC_015312.1 hypothetical protein 6158234 10367653 Psed_5798 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335778.1 6157737 D 675635 CDS YP_004335779.1 331699540 10367654 6158240..6158635 1 NC_015312.1 hypothetical protein 6158635 10367654 Psed_5799 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335779.1 6158240 D 675635 CDS YP_004335780.1 331699541 10367655 6158755..6163197 1 NC_015312.1 KEGG: srt:Srot_0075 hypothetical protein; hypothetical protein 6163197 10367655 Psed_5800 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335780.1 6158755 D 675635 CDS YP_004335781.1 331699542 10367656 6163243..6163659 1 NC_015312.1 hypothetical protein 6163659 10367656 Psed_5801 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335781.1 6163243 D 675635 CDS YP_004335782.1 331699543 10367657 6163663..6165327 1 NC_015312.1 hypothetical protein 6165327 10367657 Psed_5802 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335782.1 6163663 D 675635 CDS YP_004335783.1 331699544 10367658 6165359..6165703 1 NC_015312.1 hypothetical protein 6165703 10367658 Psed_5803 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335783.1 6165359 D 675635 CDS YP_004335784.1 331699545 10367659 6165706..6166113 1 NC_015312.1 KEGG: rer:RER_25240 hypothetical protein; hypothetical protein 6166113 10367659 Psed_5804 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335784.1 6165706 D 675635 CDS YP_004335785.1 331699546 10367660 6166161..6168647 1 NC_015312.1 KEGG: dwi:Dwil_GK24884 GK24884 gene product from transcript GK24884-RA; hypothetical protein 6168647 10367660 Psed_5805 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335785.1 6166161 D 675635 CDS YP_004335786.1 331699547 10367663 6169648..6169965 1 NC_015312.1 hypothetical protein 6169965 10367663 Psed_5808 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335786.1 6169648 D 675635 CDS YP_004335787.1 331699548 10367664 6169962..6170063 1 NC_015312.1 hypothetical protein 6170063 10367664 Psed_5809 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335787.1 6169962 D 675635 CDS YP_004335788.1 331699549 10367665 6170060..6170224 1 NC_015312.1 hypothetical protein 6170224 10367665 Psed_5810 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335788.1 6170060 D 675635 CDS YP_004335789.1 331699550 10367666 6170288..6170572 1 NC_015312.1 hypothetical protein 6170572 10367666 Psed_5811 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335789.1 6170288 D 675635 CDS YP_004335790.1 331699551 10367667 6170614..6171255 1 NC_015312.1 KEGG: sca:Sca_1292a glycine-rich cell wall surface anchor protein; hypothetical protein 6171255 10367667 Psed_5812 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335790.1 6170614 D 675635 CDS YP_004335791.1 331699552 10367668 6171252..6171518 1 NC_015312.1 hypothetical protein 6171518 10367668 Psed_5813 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335791.1 6171252 D 675635 CDS YP_004335792.1 331699553 10367669 6171505..6172299 1 NC_015312.1 KEGG: mar:MAE_16090 hypothetical protein; hypothetical protein 6172299 10367669 Psed_5814 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335792.1 6171505 D 675635 CDS YP_004335793.1 331699554 10367670 6172302..6172556 1 NC_015312.1 hypothetical protein 6172556 10367670 Psed_5815 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335793.1 6172302 D 675635 CDS YP_004335794.1 331699555 10367671 complement(6172635..6172934) 1 NC_015312.1 hypothetical protein 6172934 10367671 Psed_5816 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335794.1 6172635 R 675635 CDS YP_004335795.1 331699556 10367672 complement(6172986..6173168) 1 NC_015312.1 hypothetical protein 6173168 10367672 Psed_5817 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335795.1 6172986 R 675635 CDS YP_004335796.1 331699557 10367673 complement(6173165..6173362) 1 NC_015312.1 hypothetical protein 6173362 10367673 Psed_5818 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335796.1 6173165 R 675635 CDS YP_004335797.1 331699558 10367674 6173529..6173729 1 NC_015312.1 PFAM: HTH transcriptional regulator, MerR; regulatory protein MerR 6173729 10367674 Psed_5819 Pseudonocardia dioxanivorans CB1190 regulatory protein MerR YP_004335797.1 6173529 D 675635 CDS YP_004335798.1 331699559 10367675 complement(6173735..6174520) 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: nfa:nfa15600 phage integrase; integrase protein 6174520 10367675 Psed_5820 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004335798.1 6173735 R 675635 CDS YP_004335799.1 331699560 10367676 complement(6174888..6175583) 1 NC_015312.1 KEGG: stp:Strop_2956 hypothetical protein; hypothetical protein 6175583 10367676 Psed_5821 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335799.1 6174888 R 675635 CDS YP_004335800.1 331699561 10367677 6175748..6176548 1 NC_015312.1 PFAM: Lipase, GDSL; KEGG: svi:Svir_34730 lysophospholipase L1-like esterase; G-D-S-L family lipolytic protein 6176548 10367677 Psed_5822 Pseudonocardia dioxanivorans CB1190 G-D-S-L family lipolytic protein YP_004335800.1 6175748 D 675635 CDS YP_004335801.1 331699562 10367678 complement(6176604..6177515) 1 NC_015312.1 KEGG: sen:SACE_0486 ectoine hydroxylase; TIGRFAM: Ectoine hydroxylase; PFAM: Phytanoyl-CoA dioxygenase; ectoine hydroxylase 6177515 10367678 Psed_5823 Pseudonocardia dioxanivorans CB1190 ectoine hydroxylase YP_004335801.1 6176604 R 675635 CDS YP_004335802.1 331699563 10367679 complement(6177516..6177968) 1 NC_015312.1 HAMAP: L-ectoine synthase; KEGG: svi:Svir_34790 L-ectoine synthase; PFAM: Ectoine synthase; L-ectoine synthase 6177968 10367679 Psed_5824 Pseudonocardia dioxanivorans CB1190 L-ectoine synthase YP_004335802.1 6177516 R 675635 CDS YP_004335803.1 331699564 10367680 complement(6177971..6179368) 1 NC_015312.1 TIGRFAM: Diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-2-oxoglutarate transaminase; KEGG: amd:AMED_8596 diaminobutyrate-2-oxoglutarate transaminase; PFAM: Aminotransferase class-III; diaminobutyrate/2-oxoglutarate aminotransferase 6179368 10367680 Psed_5825 Pseudonocardia dioxanivorans CB1190 diaminobutyrate/2-oxoglutarate aminotransferase YP_004335803.1 6177971 R 675635 CDS YP_004335804.1 331699565 10367681 complement(6179564..6180094) 1 NC_015312.1 TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; KEGG: sco:SCO1864 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; L-2,4-diaminobutyric acid acetyltransferase 6180094 10367681 Psed_5826 Pseudonocardia dioxanivorans CB1190 L-2,4-diaminobutyric acid acetyltransferase YP_004335804.1 6179564 R 675635 CDS YP_004335805.1 331699566 10367682 complement(6180316..6181917) 1 NC_015312.1 KEGG: mno:Mnod_3429 FAD dependent oxidoreductase; PFAM: Lycopene cyclase-type, FAD-binding; phenylacetone monooxygenase 6181917 10367682 Psed_5827 Pseudonocardia dioxanivorans CB1190 phenylacetone monooxygenase YP_004335805.1 6180316 R 675635 CDS YP_004335806.1 331699567 10367684 complement(6182447..6182920) 1 NC_015312.1 PFAM: Protein of unknown function DUF307; KEGG: amd:AMED_8507 hypothetical protein; hypothetical protein 6182920 10367684 Psed_5829 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335806.1 6182447 R 675635 CDS YP_004335807.1 331699568 10367685 6183003..6183800 1 NC_015312.1 PFAM: Protein of unknown function DUF347; KEGG: cai:Caci_8898 protein of unknown function DUF347; hypothetical protein 6183800 10367685 Psed_5830 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335807.1 6183003 D 675635 CDS YP_004335808.1 331699569 10367686 complement(6183840..6184316) 1 NC_015312.1 hypothetical protein 6184316 10367686 Psed_5831 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335808.1 6183840 R 675635 CDS YP_004335809.1 331699570 10367687 6184647..6184856 1 NC_015312.1 KEGG: fri:FraEuI1c_6484 protein of unknown function DUF2945; hypothetical protein 6184856 10367687 Psed_5832 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335809.1 6184647 D 675635 CDS YP_004335810.1 331699571 10367688 6184922..6185329 1 NC_015312.1 PFAM: Protein of unknown function DUF427; KEGG: msp:Mspyr1_50770 hypothetical protein; hypothetical protein 6185329 10367688 Psed_5833 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335810.1 6184922 D 675635 CDS YP_004335811.1 331699572 10367689 6185495..6186649 1 NC_015312.1 PFAM: Phosphate transporter; KEGG: cai:Caci_5449 phosphate transporter; phosphate transporter 6186649 10367689 Psed_5834 Pseudonocardia dioxanivorans CB1190 phosphate transporter YP_004335811.1 6185495 D 675635 CDS YP_004335812.1 331699573 10367690 6186661..6186903 1 NC_015312.1 KEGG: cai:Caci_5448 hypothetical protein; hypothetical protein 6186903 10367690 Psed_5835 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335812.1 6186661 D 675635 CDS YP_004335813.1 331699574 10367691 6186943..6187239 1 NC_015312.1 KEGG: fal:FRAAL1463 hypothetical protein; hypothetical protein 6187239 10367691 Psed_5836 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335813.1 6186943 D 675635 CDS YP_004335814.1 331699575 10367692 6187518..6188711 1 NC_015312.1 KEGG: sma:SAV_7212 FMNH2-utilizing oxygenase; FMNH2-utilizing oxygenase 6188711 10367692 Psed_5837 Pseudonocardia dioxanivorans CB1190 FMNH2-utilizing oxygenase YP_004335814.1 6187518 D 675635 CDS YP_004335815.1 331699576 10367693 6188708..6190072 1 NC_015312.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: sma:SAV_7213 FMNH2-utilizing oxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 6190072 10367693 Psed_5838 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004335815.1 6188708 D 675635 CDS YP_004335816.1 331699577 10367694 6190100..6190669 1 NC_015312.1 PFAM: NADPH-dependent FMN reductase; KEGG: fri:FraEuI1c_0040 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 6190669 10367694 Psed_5839 Pseudonocardia dioxanivorans CB1190 NADPH-dependent FMN reductase YP_004335816.1 6190100 D 675635 CDS YP_004335817.1 331699578 10367695 6190829..6191794 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: gob:Gobs_2217 alcohol dehydrogenase zinc-binding domain-containing protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 6191794 10367695 Psed_5840 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004335817.1 6190829 D 675635 CDS YP_004335818.1 331699579 10367696 6191948..6193441 1 NC_015312.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: kfl:Kfla_5077 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 6193441 10367696 Psed_5841 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate 1-dehydrogenase YP_004335818.1 6191948 D 675635 CDS YP_004335819.1 331699580 10367697 6193533..6194843 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit 6194843 10367697 Psed_5842 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004335819.1 6193533 D 675635 CDS YP_004335820.1 331699581 10367698 complement(6195057..6195794) 1 NC_015312.1 KEGG: saq:Sare_2786 hypothetical protein; hypothetical protein 6195794 10367698 Psed_5843 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335820.1 6195057 R 675635 CDS YP_004335821.1 331699582 10367699 complement(6195806..6196012) 1 NC_015312.1 KEGG: fal:FRAAL4345 hypothetical protein; hypothetical protein 6196012 10367699 Psed_5844 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335821.1 6195806 R 675635 CDS YP_004335822.1 331699583 10367700 6196119..6196673 1 NC_015312.1 KEGG: mau:Micau_3015 sigma-70 family RNA polymerase; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 6196673 10367700 Psed_5845 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004335822.1 6196119 D 675635 CDS YP_004335823.1 331699584 10367701 complement(6196718..6198169) 1 NC_015312.1 KEGG: scl:sce1195 hypothetical protein; hypothetical protein 6198169 10367701 Psed_5846 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335823.1 6196718 R 675635 CDS YP_004335824.1 331699585 10367702 complement(6198232..6199179) 1 NC_015312.1 KEGG: cfl:Cfla_2394 cell division FtsK/SpoIIIE; hypothetical protein 6199179 10367702 Psed_5847 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335824.1 6198232 R 675635 CDS YP_004335825.1 331699586 10367703 complement(6199316..6199696) 1 NC_015312.1 KEGG: nca:Noca_3309 peroxiredoxins-like; peroxiredoxins-like protein 6199696 10367703 Psed_5848 Pseudonocardia dioxanivorans CB1190 peroxiredoxins-like protein YP_004335825.1 6199316 R 675635 CDS YP_004335826.1 331699587 10367704 complement(6199693..6201678) 1 NC_015312.1 KEGG: nfa:nfa25940 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: FAD dependent oxidoreductase; hypothetical protein 6201678 10367704 Psed_5849 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335826.1 6199693 R 675635 CDS YP_004335827.1 331699588 10367705 complement(6201764..6205180) 1 NC_015312.1 KEGG: mau:Micau_3867 transcriptional activator domain-containing protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 6205180 10367705 Psed_5850 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004335827.1 6201764 R 675635 CDS YP_004335828.1 331699589 10367706 complement(6205230..6206240) 1 NC_015312.1 KEGG: gob:Gobs_2919 integral membrane protein TerC; TIGRFAM: Integral membrane protein TerC, riboswitch-linked; PFAM: Integral membrane protein TerC; TerC family integral membrane protein 6206240 10367706 Psed_5851 Pseudonocardia dioxanivorans CB1190 TerC family integral membrane protein YP_004335828.1 6205230 R 675635 CDS YP_004335829.1 331699590 10367707 6206491..6206925 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aau:AAur_1135 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 6206925 10367707 Psed_5852 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004335829.1 6206491 D 675635 CDS YP_004335830.1 331699591 10367708 complement(6207021..6208253) 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_6110 transposase; transposase IS111A/IS1328/IS1533 6208253 10367708 Psed_5853 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004335830.1 6207021 R 675635 CDS YP_004335831.1 331699592 10367709 6208499..6209659 1 NC_015312.1 PFAM: Phospholipase/carboxylesterase; KEGG: nca:Noca_2054 phospholipase/carboxylesterase; phospholipase/carboxylesterase 6209659 10367709 Psed_5854 Pseudonocardia dioxanivorans CB1190 phospholipase/carboxylesterase YP_004335831.1 6208499 D 675635 CDS YP_004335832.1 331699593 10367710 complement(6209690..6211093) 1 NC_015312.1 manually curated; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; KEGG: sgr:SGR_2706 transcriptional regulator; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 6211093 10367710 Psed_5855 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004335832.1 6209690 R 675635 CDS YP_004335833.1 331699594 10367711 6211108..6211644 1 NC_015312.1 KEGG: sma:SAV_3428 hypothetical protein; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 6211644 10367711 Psed_5856 Pseudonocardia dioxanivorans CB1190 alkylhydroperoxidase YP_004335833.1 6211108 D 675635 CDS YP_004335834.1 331699595 10367712 complement(6211665..6212441) 1 NC_015312.1 PFAM: Methyltransferase type 11; KEGG: pla:Plav_2291 hypothetical protein; type 11 methyltransferase 6212441 10367712 Psed_5857 Pseudonocardia dioxanivorans CB1190 type 11 methyltransferase YP_004335834.1 6211665 R 675635 CDS YP_004335835.1 331699596 10367713 6212757..6214235 1 NC_015312.1 PFAM: Amidase; KEGG: svi:Svir_03450 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; amidase 6214235 10367713 Psed_5858 Pseudonocardia dioxanivorans CB1190 amidase YP_004335835.1 6212757 D 675635 CDS YP_004335836.1 331699597 10367714 6214339..6215505 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: mva:Mvan_5248 glycosyl transferase, group 1; group 1 glycosyl transferase 6215505 10367714 Psed_5859 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004335836.1 6214339 D 675635 CDS YP_004335837.1 331699598 10367715 6215659..6215913 1 NC_015312.1 hypothetical protein 6215913 10367715 Psed_5860 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335837.1 6215659 D 675635 CDS YP_004335838.1 331699599 10367716 6216041..6218035 1 NC_015312.1 KEGG: cai:Caci_5167 K potassium transporter; HAMAP: Potassium uptake protein, low affinity, Kup; PFAM: K+ potassium transporter; Low affinity potassium transport system protein kup 6218035 10367716 Psed_5861 Pseudonocardia dioxanivorans CB1190 Low affinity potassium transport system protein kup YP_004335838.1 6216041 D 675635 CDS YP_004335839.1 331699600 10367717 complement(6218100..6218840) 1 NC_015312.1 KEGG: nml:Namu_1186 hypothetical protein; hypothetical protein 6218840 10367717 Psed_5862 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335839.1 6218100 R 675635 CDS YP_004335840.1 331699601 10367718 complement(6218944..6219540) 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_C0598 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 6219540 10367718 Psed_5863 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004335840.1 6218944 R 675635 CDS YP_004335841.1 331699602 10367719 6219734..6220672 1 NC_015312.1 KEGG: mau:Micau_3319 hypothetical protein; hypothetical protein 6220672 10367719 Psed_5864 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335841.1 6219734 D 675635 CDS YP_004335842.1 331699603 10367720 6220879..6222618 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_2033 MFS transporter, multidrug efflux transporter; major facilitator superfamily protein 6222618 10367720 Psed_5865 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004335842.1 6220879 D 675635 CDS YP_004335843.1 331699604 10367721 6222753..6223847 1 NC_015312.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: reu:Reut_C6321 zinc-containing alcohol dehydrogenase superfamily protein; SMART: Polyketide synthase, enoylreductase; L-iditol 2-dehydrogenase 6223847 10367721 Psed_5866 Pseudonocardia dioxanivorans CB1190 L-iditol 2-dehydrogenase YP_004335843.1 6222753 D 675635 CDS YP_004335844.1 331699605 10367722 complement(6223816..6224709) 1 NC_015312.1 hypothetical protein 6224709 10367722 Psed_5867 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335844.1 6223816 R 675635 CDS YP_004335845.1 331699606 10367723 complement(6224706..6224882) 1 NC_015312.1 hypothetical protein 6224882 10367723 Psed_5868 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335845.1 6224706 R 675635 CDS YP_004335846.1 331699607 10367724 complement(6224915..6226612) 1 NC_015312.1 KEGG: amd:AMED_7729 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 6226612 10367724 Psed_5869 Pseudonocardia dioxanivorans CB1190 cytochrome c oxidase subunit I YP_004335846.1 6224915 R 675635 CDS YP_004335847.1 331699608 10367725 complement(6226769..6227050) 1 NC_015312.1 hypothetical protein 6227050 10367725 Psed_5870 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335847.1 6226769 R 675635 CDS YP_004335848.1 331699609 10367726 6227491..6227844 1 NC_015312.1 hypothetical protein 6227844 10367726 Psed_5871 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335848.1 6227491 D 675635 CDS YP_004335849.1 331699610 10367727 6227860..6228348 1 NC_015312.1 KEGG: sen:SACE_5023 hypothetical protein; hypothetical protein 6228348 10367727 Psed_5872 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335849.1 6227860 D 675635 CDS YP_004335850.1 331699611 10367728 complement(6228304..6229533) 1 NC_015312.1 KEGG: sen:SACE_5022 regulator; transcriptional regulator CdaR 6229533 10367728 Psed_5873 Pseudonocardia dioxanivorans CB1190 transcriptional regulator CdaR YP_004335850.1 6228304 R 675635 CDS YP_004335851.1 331699612 10367729 complement(6229666..6230889) 1 NC_015312.1 PFAM: YkuD domain; KEGG: rha:RHA1_ro02802 lipoprotein; ErfK/YbiS/YcfS/YnhG family protein 6230889 10367729 Psed_5874 Pseudonocardia dioxanivorans CB1190 ErfK/YbiS/YcfS/YnhG family protein YP_004335851.1 6229666 R 675635 CDS YP_004335852.1 331699613 10367730 6231093..6232142 1 NC_015312.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: brh:RBRH_02667 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 6232142 10367730 Psed_5875 Pseudonocardia dioxanivorans CB1190 2-nitropropane dioxygenase YP_004335852.1 6231093 D 675635 CDS YP_004335853.1 331699614 10367731 complement(6232147..6232614) 1 NC_015312.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: sco:SCO5759 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 6232614 10367731 Psed_5876 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004335853.1 6232147 R 675635 CDS YP_004335854.1 331699615 10367732 complement(6232611..6232946) 1 NC_015312.1 SMART: HTH transcriptional regulator, ArsR; KEGG: fal:FRAAL3030 ArsR family transcriptional regulator; regulatory protein ArsR 6232946 10367732 Psed_5877 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004335854.1 6232611 R 675635 CDS YP_004335855.1 331699616 10367733 6232965..6233579 1 NC_015312.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sna:Snas_3694 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 6233579 10367733 Psed_5878 Pseudonocardia dioxanivorans CB1190 bifunctional deaminase-reductase domain-containing protein YP_004335855.1 6232965 D 675635 CDS YP_004335856.1 331699617 10367734 6233647..6234063 1 NC_015312.1 KEGG: gob:Gobs_3845 membrane protein; hypothetical protein 6234063 10367734 Psed_5879 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335856.1 6233647 D 675635 CDS YP_004335857.1 331699618 10367735 complement(6234073..6234303) 1 NC_015312.1 KEGG: amd:AMED_3417 hypothetical protein; hypothetical protein 6234303 10367735 Psed_5880 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335857.1 6234073 R 675635 CDS YP_004335858.1 331699619 10367736 6234416..6235090 1 NC_015312.1 KEGG: amd:AMED_8476 heme oxygenase; PFAM: Haem oxygenase-like; heme oxygenase 6235090 10367736 Psed_5881 Pseudonocardia dioxanivorans CB1190 heme oxygenase YP_004335858.1 6234416 D 675635 CDS YP_004335859.1 331699620 10367737 complement(6235104..6236006) 1 NC_015312.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: fal:FRAAL2958 gamma hydroxybutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 6236006 10367737 Psed_5882 Pseudonocardia dioxanivorans CB1190 6-phosphogluconate dehydrogenase YP_004335859.1 6235104 R 675635 CDS YP_004335860.1 331699621 10367738 complement(6236008..6236478) 1 NC_015312.1 hypothetical protein 6236478 10367738 Psed_5883 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335860.1 6236008 R 675635 CDS YP_004335861.1 331699622 10367739 6236574..6237437 1 NC_015312.1 KEGG: gob:Gobs_1538 hypothetical protein; hypothetical protein 6237437 10367739 Psed_5884 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335861.1 6236574 D 675635 CDS YP_004335862.1 331699623 10367740 complement(6237421..6238017) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_4335 TetR family transcriptional regulator; TetR family transcriptional regulator 6238017 10367740 Psed_5885 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335862.1 6237421 R 675635 CDS YP_004335863.1 331699624 10367741 complement(6238044..6238451) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcv:Bcav_3063 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6238451 10367741 Psed_5886 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004335863.1 6238044 R 675635 CDS YP_004335864.1 331699625 10367742 6238515..6239516 1 NC_015312.1 KEGG: rop:ROP_67110 DeoR family transcriptional regulator; DeoR family transcriptional regulator 6239516 10367742 Psed_5887 Pseudonocardia dioxanivorans CB1190 DeoR family transcriptional regulator YP_004335864.1 6238515 D 675635 CDS YP_004335865.1 331699626 10367743 complement(6239523..6240755) 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: amd:AMED_2548 metal-dependent hydrolase; amidohydrolase 6240755 10367743 Psed_5888 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004335865.1 6239523 R 675635 CDS YP_004335866.1 331699627 10367744 6240894..6243593 1 NC_015312.1 KEGG: nml:Namu_4086 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6243593 10367744 Psed_5889 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335866.1 6240894 D 675635 CDS YP_004335867.1 331699628 10367745 6243713..6243904 1 NC_015312.1 hypothetical protein 6243904 10367745 Psed_5890 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335867.1 6243713 D 675635 CDS YP_004335868.1 331699629 10367746 6243897..6244616 1 NC_015312.1 KEGG: bcv:Bcav_0752 hypothetical protein; hypothetical protein 6244616 10367746 Psed_5891 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335868.1 6243897 D 675635 CDS YP_004335869.1 331699630 10367747 6244613..6247855 1 NC_015312.1 KEGG: nml:Namu_2612 cytochrome P450; PFAM: Cytochrome P450; Flavodoxin/nitric oxide synthase; FAD-binding, type 1; Oxidoreductase FAD/NAD(P)-binding; NADPH--hemoprotein reductase 6247855 10367747 Psed_5892 Pseudonocardia dioxanivorans CB1190 NADPH--hemoprotein reductase YP_004335869.1 6244613 D 675635 CDS YP_004335870.1 331699631 10367748 complement(6247956..6248378) 1 NC_015312.1 KEGG: mil:ML5_2753 hypothetical protein; hypothetical protein 6248378 10367748 Psed_5893 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335870.1 6247956 R 675635 CDS YP_004335871.1 331699632 10367749 complement(6248451..6249608) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pla:Plav_1773 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 6249608 10367749 Psed_5894 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004335871.1 6248451 R 675635 CDS YP_004335872.1 331699633 10367750 6249807..6251018 1 NC_015312.1 PFAM: Domain of unknown function DUF1228; KEGG: rha:RHA1_ro00806 hypothetical protein; hypothetical protein 6251018 10367750 Psed_5895 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335872.1 6249807 D 675635 CDS YP_004335873.1 331699634 10367751 6251042..6251743 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_8225 transcriptional regulator, TetR family; TetR family transcriptional regulator 6251743 10367751 Psed_5896 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335873.1 6251042 D 675635 CDS YP_004335874.1 331699635 10367752 6251740..6253224 1 NC_015312.1 KEGG: cai:Caci_5554 hypothetical protein; hypothetical protein 6253224 10367752 Psed_5897 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335874.1 6251740 D 675635 CDS YP_004335875.1 331699636 10367753 complement(6253242..6254135) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: kfl:Kfla_6396 luciferase-like monooxygenase; luciferase-like protein 6254135 10367753 Psed_5898 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004335875.1 6253242 R 675635 CDS YP_004335876.1 331699637 10367754 complement(6254219..6255619) 1 NC_015312.1 KEGG: chu:CHU_0455 pectate lyase-related protein; hypothetical protein 6255619 10367754 Psed_5899 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335876.1 6254219 R 675635 CDS YP_004335877.1 331699638 10367755 6255809..6256333 1 NC_015312.1 hypothetical protein 6256333 10367755 Psed_5900 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335877.1 6255809 D 675635 CDS YP_004335878.1 331699639 10367756 complement(6256335..6256790) 1 NC_015312.1 KEGG: mav:MAV_3660 multimeric flavodoxin WrbA; multimeric flavodoxin WrbA 6256790 10367756 Psed_5901 Pseudonocardia dioxanivorans CB1190 multimeric flavodoxin WrbA YP_004335878.1 6256335 R 675635 CDS YP_004335879.1 331699640 10367757 6256867..6258132 1 NC_015312.1 PFAM: Cation/H+ exchanger; KEGG: mjl:Mjls_4930 sodium/hydrogen exchanger; sodium/hydrogen exchanger 6258132 10367757 Psed_5902 Pseudonocardia dioxanivorans CB1190 sodium/hydrogen exchanger YP_004335879.1 6256867 D 675635 CDS YP_004335880.1 331699641 10367758 6258273..6258998 1 NC_015312.1 KEGG: bac:BamMC406_4417 hypothetical protein; hypothetical protein 6258998 10367758 Psed_5903 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335880.1 6258273 D 675635 CDS YP_004335881.1 331699642 10367759 6258995..6260212 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: tbi:Tbis_2746 cytochrome P450; cytochrome P450 6260212 10367759 Psed_5904 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004335881.1 6258995 D 675635 CDS YP_004335882.1 331699643 10367760 6260325..6261599 1 NC_015312.1 KEGG: rop:ROP_pROB01-03170 aminotransferase; PFAM: Aminotransferase class-III; acetylornithine transaminase 6261599 10367760 Psed_5905 Pseudonocardia dioxanivorans CB1190 acetylornithine transaminase YP_004335882.1 6260325 D 675635 CDS YP_004335883.1 331699644 10367761 6261643..6261900 1 NC_015312.1 hypothetical protein 6261900 10367761 Psed_5906 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335883.1 6261643 D 675635 CDS YP_004335884.1 331699645 10367763 complement(6262307..6262801) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: cai:Caci_3556 cupin 2 conserved barrel domain protein; cupin 6262801 10367763 Psed_5908 Pseudonocardia dioxanivorans CB1190 cupin YP_004335884.1 6262307 R 675635 CDS YP_004335885.1 331699646 10367764 6263506..6264225 1 NC_015312.1 KEGG: rxy:Rxyl_1852 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 6264225 10367764 Psed_5909 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004335885.1 6263506 D 675635 CDS YP_004335886.1 331699647 10367765 6264222..6265607 1 NC_015312.1 KEGG: rxy:Rxyl_1851 phenylacetate-CoA ligase; phenylacetate--CoA ligase 6265607 10367765 Psed_5910 Pseudonocardia dioxanivorans CB1190 phenylacetate--CoA ligase YP_004335886.1 6264222 D 675635 CDS YP_004335887.1 331699648 10367766 6265749..6267632 1 NC_015312.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: rxy:Rxyl_1850 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 6267632 10367766 Psed_5911 Pseudonocardia dioxanivorans CB1190 hydantoinase/oxoprolinase YP_004335887.1 6265749 D 675635 CDS YP_004335888.1 331699649 10367767 6267632..6268009 1 NC_015312.1 PFAM: Acetone carboxylase, gamma subunit-related; KEGG: rxy:Rxyl_1849 subunit of acetophenone carboxylase; acetone carboxylase subunit gamma 6268009 10367767 Psed_5912 Pseudonocardia dioxanivorans CB1190 acetone carboxylase subunit gamma YP_004335888.1 6267632 D 675635 CDS YP_004335889.1 331699650 10367768 6268006..6270225 1 NC_015312.1 KEGG: eba:c1A102 subunit of acetophenone carboxylase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 6270225 10367768 Psed_5913 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004335889.1 6268006 D 675635 CDS YP_004335890.1 331699651 10367769 6270222..6272276 1 NC_015312.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rxy:Rxyl_1847 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 6272276 10367769 Psed_5914 Pseudonocardia dioxanivorans CB1190 hydantoinase B/oxoprolinase YP_004335890.1 6270222 D 675635 CDS YP_004335891.1 331699652 10367770 6272290..6272901 1 NC_015312.1 hypothetical protein 6272901 10367770 Psed_5915 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335891.1 6272290 D 675635 CDS YP_004335892.1 331699653 10367771 6272996..6274183 1 NC_015312.1 KEGG: rxy:Rxyl_1737 thiolase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA C-acetyltransferase 6274183 10367771 Psed_5916 Pseudonocardia dioxanivorans CB1190 acetyl-CoA C-acetyltransferase YP_004335892.1 6272996 D 675635 CDS YP_004335893.1 331699654 10367772 6274185..6276086 1 NC_015312.1 KEGG: hoh:Hoch_2125 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 6276086 10367772 Psed_5917 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004335893.1 6274185 D 675635 CDS YP_004335894.1 331699655 10367774 6276551..6277348 1 NC_015312.1 PFAM: Polysaccharide deacetylase; KEGG: fra:Francci3_0165 polysaccharide deacetylase; polysaccharide deacetylase 6277348 10367774 Psed_5919 Pseudonocardia dioxanivorans CB1190 polysaccharide deacetylase YP_004335894.1 6276551 D 675635 CDS YP_004335895.1 331699656 10367775 6277452..6278060 1 NC_015312.1 PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: nml:Namu_0604 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein 6278060 10367775 Psed_5920 Pseudonocardia dioxanivorans CB1190 oxidoreductase molybdopterin binding protein YP_004335895.1 6277452 D 675635 CDS YP_004335896.1 331699657 10367776 6278050..6278781 1 NC_015312.1 PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; KEGG: nml:Namu_0605 oxidoreductase FAD-binding domain-containing protein; oxidoreductase FAD-binding domain-containing protein 6278781 10367776 Psed_5921 Pseudonocardia dioxanivorans CB1190 oxidoreductase FAD-binding domain-containing protein YP_004335896.1 6278050 D 675635 CDS YP_004335897.1 331699658 10367777 complement(6278803..6280305) 1 NC_015312.1 KEGG: tpr:Tpau_4141 carboxylesterase; PFAM: Carboxylesterase, type B; carboxylesterase 6280305 10367777 Psed_5922 Pseudonocardia dioxanivorans CB1190 carboxylesterase YP_004335897.1 6278803 R 675635 CDS YP_004335898.1 331699659 10367778 complement(6280414..6280986) 1 NC_015312.1 KEGG: rer:RER_32400 TetR family transcriptional regulator; TetR family transcriptional regulator 6280986 10367778 Psed_5923 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335898.1 6280414 R 675635 CDS YP_004335899.1 331699660 10367779 6281089..6282912 1 NC_015312.1 PFAM: Glycoside hydrolase 15-related; KEGG: amd:AMED_3900 glucoamylase-like glycosyl hydrolase; glycoside hydrolase 15-like protein 6282912 10367779 Psed_5924 Pseudonocardia dioxanivorans CB1190 glycoside hydrolase 15-like protein YP_004335899.1 6281089 D 675635 CDS YP_004335900.1 331699661 10367780 6282949..6283950 1 NC_015312.1 KEGG: sma:SAV_7048 cation efflux system protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 6283950 10367780 Psed_5925 Pseudonocardia dioxanivorans CB1190 cation diffusion facilitator family transporter YP_004335900.1 6282949 D 675635 CDS YP_004335901.1 331699662 10367781 6283998..6285374 1 NC_015312.1 PFAM: AMP-dependent synthetase/ligase; KEGG: fre:Franean1_6630 hypothetical protein; AMP-dependent synthetase/ligase 6285374 10367781 Psed_5926 Pseudonocardia dioxanivorans CB1190 AMP-dependent synthetase/ligase YP_004335901.1 6283998 D 675635 CDS YP_004335902.1 331699663 10367782 6285393..6286379 1 NC_015312.1 KEGG: fri:FraEuI1c_4435 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SMART: CHK kinase-like; aminoglycoside phosphotransferase 6286379 10367782 Psed_5927 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004335902.1 6285393 D 675635 CDS YP_004335903.1 331699664 10367783 6286467..6286961 1 NC_015312.1 PFAM: Protein of unknown function DUF664; KEGG: sco:SCO5093 mini-circle protein; hypothetical protein 6286961 10367783 Psed_5928 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335903.1 6286467 D 675635 CDS YP_004335904.1 331699665 10367784 complement(6287016..6288119) 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: nml:Namu_3462 beta-lactamase; beta-lactamase 6288119 10367784 Psed_5929 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004335904.1 6287016 R 675635 CDS YP_004335905.1 331699666 10367785 complement(6288195..6289466) 1 NC_015312.1 KEGG: met:M446_5697 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; Carbon monoxide dehydrogenase subunit G; carbon-monoxide dehydrogenase 6289466 10367785 Psed_5930 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335905.1 6288195 R 675635 CDS YP_004335906.1 331699667 10367786 complement(6289463..6290335) 1 NC_015312.1 KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; carbon-monoxide dehydrogenase 6290335 10367786 Psed_5931 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335906.1 6289463 R 675635 CDS YP_004335907.1 331699668 10367787 complement(6290335..6291114) 1 NC_015312.1 PFAM: Crotonase, core; KEGG: reu:Reut_C5886 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 6291114 10367787 Psed_5932 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004335907.1 6290335 R 675635 CDS YP_004335908.1 331699669 10367788 complement(6291116..6293542) 1 NC_015312.1 KEGG: gka:GKP21 molybdopterin binding oxidoreductase large subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 6293542 10367788 Psed_5933 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004335908.1 6291116 R 675635 CDS YP_004335909.1 331699670 10367789 complement(6293535..6295049) 1 NC_015312.1 KEGG: gmc:GY4MC1_2421 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 6295049 10367789 Psed_5934 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004335909.1 6293535 R 675635 CDS YP_004335910.1 331699671 10367790 6295223..6295843 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: fre:Franean1_3145 PadR-like family transcriptional regulator; PadR family transcriptional regulator 6295843 10367790 Psed_5935 Pseudonocardia dioxanivorans CB1190 PadR family transcriptional regulator YP_004335910.1 6295223 D 675635 CDS YP_004335911.1 331699672 10367791 complement(6295870..6296538) 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sco:SCO0154 hypothetical protein; alkyl hydroperoxide reductase 6296538 10367791 Psed_5936 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004335911.1 6295870 R 675635 CDS YP_004335912.1 331699673 10367792 6296627..6297247 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL1635 TetR family transcriptional regulator; TetR family transcriptional regulator 6297247 10367792 Psed_5937 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004335912.1 6296627 D 675635 CDS YP_004335913.1 331699674 10367793 6297359..6297646 1 NC_015312.1 KEGG: tcu:Tcur_0280 glycoside hydrolase 13 domain-containing protein; glycoside hydrolase protein 6297646 10367793 Psed_5938 Pseudonocardia dioxanivorans CB1190 glycoside hydrolase protein YP_004335913.1 6297359 D 675635 CDS YP_004335914.1 331699675 10367794 complement(6297707..6297931) 1 NC_015312.1 KEGG: rha:RHA1_ro08581 hypothetical protein; hypothetical protein 6297931 10367794 Psed_5939 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335914.1 6297707 R 675635 CDS YP_004335915.1 331699676 10367795 6298045..6299100 1 NC_015312.1 KEGG: mau:Micau_3949 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 6299100 10367795 Psed_5940 Pseudonocardia dioxanivorans CB1190 UDP-glucose 4-epimerase YP_004335915.1 6298045 D 675635 CDS YP_004335916.1 331699677 10367796 6299175..6299822 1 NC_015312.1 KEGG: sen:SACE_3341 glycosyl transferase protein; manually curated; PFAM: Glycosyl transferase, family 2; family 2 glycosyl transferase 6299822 10367796 Psed_5941 Pseudonocardia dioxanivorans CB1190 family 2 glycosyl transferase YP_004335916.1 6299175 D 675635 CDS YP_004335917.1 331699678 10367797 6299819..6300490 1 NC_015312.1 PFAM: Protein of unknown function DUF2064; KEGG: saq:Sare_2754 hypothetical protein; hypothetical protein 6300490 10367797 Psed_5942 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335917.1 6299819 D 675635 CDS YP_004335918.1 331699679 10367798 6300487..6301098 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: sen:SACE_3339 SAM-dependent methyltransferase; type 12 methyltransferase 6301098 10367798 Psed_5943 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004335918.1 6300487 D 675635 CDS YP_004335919.1 331699680 10367799 complement(6301126..6301458) 1 NC_015312.1 hypothetical protein 6301458 10367799 Psed_5944 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335919.1 6301126 R 675635 CDS YP_004335920.1 331699681 10367800 complement(6301530..6302576) 1 NC_015312.1 KEGG: sen:SACE_3344 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 6302576 10367800 Psed_5945 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335920.1 6301530 R 675635 CDS YP_004335921.1 331699682 10367801 complement(6302578..6303360) 1 NC_015312.1 KEGG: sen:SACE_3343 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6303360 10367801 Psed_5946 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335921.1 6302578 R 675635 CDS YP_004335922.1 331699683 10367802 6303407..6304597 1 NC_015312.1 KEGG: mjl:Mjls_0708 oxidoreductase, molybdopterin binding; manually curated; PFAM: Oxidoreductase, molybdopterin-binding domain; oxidoreductase molybdopterin binding protein 6304597 10367802 Psed_5947 Pseudonocardia dioxanivorans CB1190 oxidoreductase molybdopterin binding protein YP_004335922.1 6303407 D 675635 CDS YP_004335923.1 331699684 10367803 6304594..6305058 1 NC_015312.1 KEGG: mjl:Mjls_0707 hypothetical protein; hypothetical protein 6305058 10367803 Psed_5948 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335923.1 6304594 D 675635 CDS YP_004335924.1 331699685 10367804 complement(6305030..6306319) 1 NC_015312.1 KEGG: amd:AMED_8323 hypothetical protein; hypothetical protein 6306319 10367804 Psed_5949 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335924.1 6305030 R 675635 CDS YP_004335925.1 331699686 10367805 complement(6306468..6307892) 1 NC_015312.1 KEGG: sti:Sthe_2520 amidase; PFAM: Amidase; amidase 6307892 10367805 Psed_5950 Pseudonocardia dioxanivorans CB1190 amidase YP_004335925.1 6306468 R 675635 CDS YP_004335926.1 331699687 10367806 complement(6307889..6308131) 1 NC_015312.1 hypothetical protein 6308131 10367806 Psed_5951 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335926.1 6307889 R 675635 CDS YP_004335927.1 331699688 10367807 complement(6308128..6308556) 1 NC_015312.1 KEGG: aau:AAur_pTC20145 nitrile hydratase b-subunit; nitrile hydratase b-subunit 6308556 10367807 Psed_5952 Pseudonocardia dioxanivorans CB1190 nitrile hydratase b-subunit YP_004335927.1 6308128 R 675635 CDS YP_004335928.1 331699689 10367808 complement(6308561..6309190) 1 NC_015312.1 TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 6309190 10367808 Psed_5953 Pseudonocardia dioxanivorans CB1190 nitrile hydratase subunit alpha YP_004335928.1 6308561 R 675635 CDS YP_004335929.1 331699690 10367809 complement(6309232..6309912) 1 NC_015312.1 KEGG: aau:AAur_pTC20147 cobalt-containing nitrile hydratase beta subunit; nitrile hydratase 6309912 10367809 Psed_5954 Pseudonocardia dioxanivorans CB1190 nitrile hydratase YP_004335929.1 6309232 R 675635 CDS YP_004335930.1 331699691 10367810 complement(6310051..6311487) 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: aau:AAur_pTC20138 branched-chain amino acid ABC transporter; ABC transporter substrate-binding protein 6311487 10367810 Psed_5955 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004335930.1 6310051 R 675635 CDS YP_004335931.1 331699692 10367811 complement(6311529..6311918) 1 NC_015312.1 KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 6311918 10367811 Psed_5956 Pseudonocardia dioxanivorans CB1190 ArsR family transcriptional regulator YP_004335931.1 6311529 R 675635 CDS YP_004335932.1 331699693 10367812 complement(6311980..6312852) 1 NC_015312.1 KEGG: mmi:MMAR_3279 hypothetical protein; hypothetical protein 6312852 10367812 Psed_5957 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335932.1 6311980 R 675635 CDS YP_004335933.1 331699694 10367813 complement(6312849..6313964) 1 NC_015312.1 KEGG: msm:MSMEG_6684 agarase; agarase 6313964 10367813 Psed_5958 Pseudonocardia dioxanivorans CB1190 agarase YP_004335933.1 6312849 R 675635 CDS YP_004335934.1 331699695 10367814 complement(6314074..6315234) 1 NC_015312.1 KEGG: rer:RER_06600 hypothetical protein; hypothetical protein 6315234 10367814 Psed_5959 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335934.1 6314074 R 675635 CDS YP_004335935.1 331699696 10367816 complement(6316351..6317454) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 6317454 10367816 Psed_5961 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004335935.1 6316351 R 675635 CDS YP_004335936.1 331699697 10367817 complement(6317529..6318344) 1 NC_015312.1 hypothetical protein 6318344 10367817 Psed_5962 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335936.1 6317529 R 675635 CDS YP_004335937.1 331699698 10367818 complement(6318341..6318679) 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: mjl:Mjls_5668 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 6318679 10367818 Psed_5963 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004335937.1 6318341 R 675635 CDS YP_004335938.1 331699699 10367819 complement(6318705..6319496) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: msm:MSMEG_1234 taurine import ATP-binding protein TauB; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 6319496 10367819 Psed_5964 Pseudonocardia dioxanivorans CB1190 taurine-transporting AtPase YP_004335938.1 6318705 R 675635 CDS YP_004335939.1 331699700 10367820 complement(6319493..6320470) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro06849 ABC transporter, permease; ABC transporter permease 6320470 10367820 Psed_5965 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004335939.1 6319493 R 675635 CDS YP_004335940.1 331699701 10367821 complement(6320484..6321926) 1 NC_015312.1 KEGG: msm:MSMEG_1232 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 6321926 10367821 Psed_5966 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004335940.1 6320484 R 675635 CDS YP_004335941.1 331699702 10367822 complement(6321923..6322150) 1 NC_015312.1 PFAM: 4Fe-4S binding domain; KEGG: mab:MAB_2240 ferredoxin; 4Fe-4S ferredoxin 6322150 10367822 Psed_5967 Pseudonocardia dioxanivorans CB1190 4Fe-4S ferredoxin YP_004335941.1 6321923 R 675635 CDS YP_004335942.1 331699703 10367824 complement(6325214..6326026) 1 NC_015312.1 KEGG: sco:SCO0610 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 6326026 10367824 Psed_5970 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004335942.1 6325214 R 675635 CDS YP_004335943.1 331699704 10367825 6326275..6327180 1 NC_015312.1 KEGG: sme:SMa1501 hypothetical protein; hypothetical protein 6327180 10367825 Psed_5971 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335943.1 6326275 D 675635 CDS YP_004335944.1 331699705 10367828 6328647..6329141 1 NC_015312.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bbt:BBta_5144 hypothetical protein; 4-oxalocrotonate tautomerase 6329141 10367828 Psed_5974 Pseudonocardia dioxanivorans CB1190 4-oxalocrotonate tautomerase YP_004335944.1 6328647 D 675635 CDS YP_004335945.1 331699706 10367829 complement(6329304..6329882) 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: sen:SACE_3001 hypothetical protein; HxlR family transcriptional regulator 6329882 10367829 Psed_5975 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004335945.1 6329304 R 675635 CDS YP_004335946.1 331699707 10367831 complement(6330277..6331167) 1 NC_015312.1 KEGG: amd:AMED_7697 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6331167 10367831 Psed_5977 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004335946.1 6330277 R 675635 CDS YP_004335947.1 331699708 10367832 6331351..6332418 1 NC_015312.1 KEGG: cai:Caci_7438 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 6332418 10367832 Psed_5978 Pseudonocardia dioxanivorans CB1190 aryl-alcohol dehydrogenase YP_004335947.1 6331351 D 675635 CDS YP_004335948.1 331699709 10367833 6332468..6334168 1 NC_015312.1 KEGG: fri:FraEuI1c_4109 hydrolase CocE/NonD family protein; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein 6334168 10367833 Psed_5979 Pseudonocardia dioxanivorans CB1190 hydrolase CocE/NonD family protein YP_004335948.1 6332468 D 675635 CDS YP_004335949.1 331699710 10367834 complement(6334182..6335999) 1 NC_015312.1 PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; KEGG: rha:RHA1_ro06691 transcriptional regulator; Fis family transcriptional regulator 6335999 10367834 Psed_5980 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004335949.1 6334182 R 675635 CDS YP_004335950.1 331699711 10367835 complement(6336201..6337841) 1 NC_015312.1 KEGG: rha:RHA1_ro08137 cyclohexanone monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclopentanone monooxygenase 6337841 10367835 Psed_5981 Pseudonocardia dioxanivorans CB1190 cyclopentanone monooxygenase YP_004335950.1 6336201 R 675635 CDS YP_004335951.1 331699712 10367836 complement(6337991..6338800) 1 NC_015312.1 KEGG: rha:RHA1_ro11053 N-acyl homoserine lactonase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 6338800 10367836 Psed_5982 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004335951.1 6337991 R 675635 CDS YP_004335952.1 331699713 10367838 complement(6339473..6341068) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro04805 major facilitator superfamily multidrug resistance protein; major facilitator superfamily protein 6341068 10367838 Psed_5984 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004335952.1 6339473 R 675635 CDS YP_004335953.1 331699714 10367839 complement(6341065..6341961) 1 NC_015312.1 PFAM: Peptidase M48; KEGG: nda:Ndas_0289 peptidase M48 Ste24p; peptidase M48 Ste24p 6341961 10367839 Psed_5985 Pseudonocardia dioxanivorans CB1190 peptidase M48 Ste24p YP_004335953.1 6341065 R 675635 CDS YP_004335954.1 331699715 10367840 complement(6341988..6342422) 1 NC_015312.1 KEGG: amd:AMED_3902 integral membrane protein; hypothetical protein 6342422 10367840 Psed_5986 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335954.1 6341988 R 675635 CDS YP_004335955.1 331699716 10367841 complement(6342505..6342978) 1 NC_015312.1 KEGG: sen:SACE_2415 integral membrane protein; hypothetical protein 6342978 10367841 Psed_5987 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335955.1 6342505 R 675635 CDS YP_004335956.1 331699717 10367842 complement(6343064..6343609) 1 NC_015312.1 KEGG: spu:579074 similar to HLA-B-associated transcript 3; hypothetical protein 6343609 10367842 Psed_5988 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335956.1 6343064 R 675635 CDS YP_004335957.1 331699718 10367843 complement(6343688..6343924) 1 NC_015312.1 hypothetical protein 6343924 10367843 Psed_5989 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335957.1 6343688 R 675635 CDS YP_004335958.1 331699719 10367844 complement(6344254..6345195) 1 NC_015312.1 KEGG: nfa:nfa28330 transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6345195 10367844 Psed_5990 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004335958.1 6344254 R 675635 CDS YP_004335959.1 331699720 10367845 6345297..6346730 1 NC_015312.1 PFAM: Amidase; KEGG: nfa:nfa28320 amidase; amidase 6346730 10367845 Psed_5991 Pseudonocardia dioxanivorans CB1190 amidase YP_004335959.1 6345297 D 675635 CDS YP_004335960.1 331699721 10367846 6346940..6348019 1 NC_015312.1 PFAM: Ribonuclease BN-related; KEGG: sco:SCO7414 integral membrane protein; ribonuclease BN 6348019 10367846 Psed_5992 Pseudonocardia dioxanivorans CB1190 ribonuclease BN YP_004335960.1 6346940 D 675635 CDS YP_004335961.1 331699722 10367848 6348355..6348951 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: scb:SCAB_5731 hypothetical protein; hypothetical protein 6348951 10367848 Psed_5994 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335961.1 6348355 D 675635 CDS YP_004335962.1 331699723 10367849 complement(6349034..6350602) 1 NC_015312.1 KEGG: nml:Namu_0665 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Monooxygenase, FAD-binding; gluconate 2-dehydrogenase 6350602 10367849 Psed_5995 Pseudonocardia dioxanivorans CB1190 gluconate 2-dehydrogenase YP_004335962.1 6349034 R 675635 CDS YP_004335963.1 331699724 10367850 complement(6350599..6351033) 1 NC_015312.1 KEGG: nml:Namu_0666 hypothetical protein; hypothetical protein 6351033 10367850 Psed_5996 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335963.1 6350599 R 675635 CDS YP_004335964.1 331699725 10367851 complement(6351193..6352704) 1 NC_015312.1 PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: nda:Ndas_3497 sigma54 specific transcriptional regulator, Fis family; Fis family transcriptional regulator 6352704 10367851 Psed_5997 Pseudonocardia dioxanivorans CB1190 Fis family transcriptional regulator YP_004335964.1 6351193 R 675635 CDS YP_004335965.1 331699726 10367852 6352974..6357482 1 NC_015312.1 PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: ami:Amir_1129 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 6357482 10367852 Psed_5998 Pseudonocardia dioxanivorans CB1190 NAD-glutamate dehydrogenase YP_004335965.1 6352974 D 675635 CDS YP_004335966.1 331699727 10367853 complement(6357469..6358434) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_3802 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 6358434 10367853 Psed_5999 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004335966.1 6357469 R 675635 CDS YP_004335967.1 331699728 10367854 6358510..6359382 1 NC_015312.1 KEGG: sco:SCO0891 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 6359382 10367854 Psed_6000 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004335967.1 6358510 D 675635 CDS YP_004335968.1 331699729 10367855 6359525..6360034 1 NC_015312.1 KEGG: fri:FraEuI1c_2782 F420-dependent oxidoreductase; hypothetical protein 6360034 10367855 Psed_6001 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335968.1 6359525 D 675635 CDS YP_004335969.1 331699730 10367856 complement(6360162..6361232) 1 NC_015312.1 KEGG: mva:Mvan_0652 regulatory protein; regulatory protein 6361232 10367856 Psed_6002 Pseudonocardia dioxanivorans CB1190 regulatory protein YP_004335969.1 6360162 R 675635 CDS YP_004335970.1 331699731 10367857 6361325..6361771 1 NC_015312.1 KEGG: sma:SAV_1188 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 6361771 10367857 Psed_6003 Pseudonocardia dioxanivorans CB1190 regulatory protein MarR YP_004335970.1 6361325 D 675635 CDS YP_004335971.1 331699732 10367858 6361936..6362643 1 NC_015312.1 KEGG: mva:Mvan_0647 nitrile hydratase; nitrile hydratase 6362643 10367858 Psed_6004 Pseudonocardia dioxanivorans CB1190 nitrile hydratase YP_004335971.1 6361936 D 675635 CDS YP_004335972.1 331699733 10367859 6362673..6363296 1 NC_015312.1 TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: mva:Mvan_0648 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 6363296 10367859 Psed_6005 Pseudonocardia dioxanivorans CB1190 nitrile hydratase subunit alpha YP_004335972.1 6362673 D 675635 CDS YP_004335973.1 331699734 10367860 6363293..6363658 1 NC_015312.1 KEGG: mva:Mvan_0649 hypothetical protein; hypothetical protein 6363658 10367860 Psed_6006 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335973.1 6363293 D 675635 CDS YP_004335974.1 331699735 10367861 complement(6363730..6364746) 1 NC_015312.1 PFAM: Acetamidase/Formamidase; KEGG: fri:FraEuI1c_0390 acetamidase/formamidase; acetamidase/formamidase 6364746 10367861 Psed_6007 Pseudonocardia dioxanivorans CB1190 acetamidase/formamidase YP_004335974.1 6363730 R 675635 CDS YP_004335975.1 331699736 10367862 6364909..6365430 1 NC_015312.1 KEGG: mva:Mvan_0650 hypothetical protein; hypothetical protein 6365430 10367862 Psed_6008 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335975.1 6364909 D 675635 CDS YP_004335976.1 331699737 10367863 complement(6366040..6366459) 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: sti:Sthe_2323 cupin 2 conserved barrel domain protein; cupin 6366459 10367863 Psed_6009 Pseudonocardia dioxanivorans CB1190 cupin YP_004335976.1 6366040 R 675635 CDS YP_004335977.1 331699738 10367864 6366868..6367428 1 NC_015312.1 KEGG: nda:Ndas_0789 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, ArsR; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 6367428 10367864 Psed_6010 Pseudonocardia dioxanivorans CB1190 AsnC family transcriptional regulator YP_004335977.1 6366868 D 675635 CDS YP_004335978.1 331699739 10367865 complement(6367403..6368644) 1 NC_015312.1 PFAM: Aminotransferase, class I/classII; KEGG: rsc:RCFBP_20493 transcriptional regulators containing a DNA-binding hth domain and an aminotransferase domain transcriptional regulator protein; GntR family transcriptional regulator 6368644 10367865 Psed_6011 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004335978.1 6367403 R 675635 CDS YP_004335979.1 331699740 10367866 6368833..6370008 1 NC_015312.1 KEGG: rsa:RSal33209_0658 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; aspartate transaminase 6370008 10367866 Psed_6012 Pseudonocardia dioxanivorans CB1190 aspartate transaminase YP_004335979.1 6368833 D 675635 CDS YP_004335980.1 331699741 10367867 6370262..6371875 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: pjd:Pjdr2_5222 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 6371875 10367867 Psed_6013 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004335980.1 6370262 D 675635 CDS YP_004335981.1 331699742 10367868 6371883..6372815 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sti:Sthe_3428 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 6372815 10367868 Psed_6014 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004335981.1 6371883 D 675635 CDS YP_004335982.1 331699743 10367869 6372803..6373765 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr5515 ABC transporter, permease; ABC transporter permease 6373765 10367869 Psed_6015 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004335982.1 6372803 D 675635 CDS YP_004335983.1 331699744 10367870 6373773..6374528 1 NC_015312.1 KEGG: avi:Avi_1654 Zn-dependent hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 6374528 10367870 Psed_6016 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004335983.1 6373773 D 675635 CDS YP_004335984.1 331699745 10367871 6374537..6375748 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: bpt:Bpet0100 imidazolonepropionase; amidohydrolase 6375748 10367871 Psed_6017 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004335984.1 6374537 D 675635 CDS YP_004335985.1 331699746 10367872 6375753..6376769 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: ret:RHE_CH03099 oligopeptide ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 6376769 10367872 Psed_6018 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004335985.1 6375753 D 675635 CDS YP_004335986.1 331699747 10367873 6376766..6377758 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dau:Daud_0389 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 6377758 10367873 Psed_6019 Pseudonocardia dioxanivorans CB1190 peptide ABC transporter ATPase YP_004335986.1 6376766 D 675635 CDS YP_004335987.1 331699748 10367874 6377968..6378747 1 NC_015312.1 KEGG: ami:Amir_1933 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6378747 10367874 Psed_6020 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004335987.1 6377968 D 675635 CDS YP_004335988.1 331699749 10367875 6378734..6380119 1 NC_015312.1 KEGG: amd:AMED_5727 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 6380119 10367875 Psed_6021 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004335988.1 6378734 D 675635 CDS YP_004335989.1 331699750 10367876 6380116..6380340 1 NC_015312.1 hypothetical protein 6380340 10367876 Psed_6022 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335989.1 6380116 D 675635 CDS YP_004335990.1 331699751 10367877 complement(6380312..6381256) 1 NC_015312.1 KEGG: svi:Svir_08000 hypothetical protein; hypothetical protein 6381256 10367877 Psed_6023 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335990.1 6380312 R 675635 CDS YP_004335991.1 331699752 10367878 complement(6381441..6382235) 1 NC_015312.1 KEGG: rxy:Rxyl_2722 hypothetical protein; hypothetical protein 6382235 10367878 Psed_6024 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335991.1 6381441 R 675635 CDS YP_004335992.1 331699753 10367879 complement(6382232..6382444) 1 NC_015312.1 hypothetical protein 6382444 10367879 Psed_6025 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004335992.1 6382232 R 675635 CDS YP_004335993.1 331699754 10367880 complement(6382550..6383668) 1 NC_015312.1 KEGG: fra:Francci3_1987 mandelate racemase/muconate lactonizing enzyme; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; mandelate racemase 6383668 10367880 Psed_6026 Pseudonocardia dioxanivorans CB1190 mandelate racemase YP_004335993.1 6382550 R 675635 CDS YP_004335994.1 331699755 10367881 6383868..6385682 1 NC_015312.1 KEGG: sco:SCO7412 thiamine pyrophosphate protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; pyruvate dehydrogenase 6385682 10367881 Psed_6027 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004335994.1 6383868 D 675635 CDS YP_004335995.1 331699756 10367882 6385679..6388831 1 NC_015312.1 KEGG: rxy:Rxyl_2720 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich domain; D-lactate dehydrogenase 6388831 10367882 Psed_6028 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase YP_004335995.1 6385679 D 675635 CDS YP_004335996.1 331699757 10367883 6388828..6389823 1 NC_015312.1 KEGG: sco:SCO7413 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 6389823 10367883 Psed_6029 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004335996.1 6388828 D 675635 CDS YP_004335997.1 331699758 10367884 complement(6389856..6391604) 1 NC_015312.1 PFAM: Glycoside hydrolase 15-related; KEGG: rha:RHA1_ro08311 glycosyl hydrolase; glycoside hydrolase 15-like protein 6391604 10367884 Psed_6030 Pseudonocardia dioxanivorans CB1190 glycoside hydrolase 15-like protein YP_004335997.1 6389856 R 675635 CDS YP_004335998.1 331699759 10367885 complement(6391895..6392344) 1 NC_015312.1 KEGG: tcu:Tcur_1124 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 6392344 10367885 Psed_6031 Pseudonocardia dioxanivorans CB1190 response regulator receiver protein YP_004335998.1 6391895 R 675635 CDS YP_004335999.1 331699760 10367886 complement(6392703..6393191) 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mpa:MAP2446c hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 6393191 10367886 Psed_6032 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004335999.1 6392703 R 675635 CDS YP_004336000.1 331699761 10367887 complement(6393311..6393700) 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: pna:Pnap_4728 hypothetical protein; hypothetical protein 6393700 10367887 Psed_6033 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336000.1 6393311 R 675635 CDS YP_004336001.1 331699762 10367888 complement(6393909..6394691) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: nca:Noca_0210 alpha/beta hydrolase fold; alpha/beta hydrolase 6394691 10367888 Psed_6034 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004336001.1 6393909 R 675635 CDS YP_004336002.1 331699763 10367889 complement(6394697..6395440) 1 NC_015312.1 PFAM: Dienelactone hydrolase; KEGG: rpd:RPD_3874 dienelactone hydrolase; dienelactone hydrolase 6395440 10367889 Psed_6035 Pseudonocardia dioxanivorans CB1190 dienelactone hydrolase YP_004336002.1 6394697 R 675635 CDS YP_004336003.1 331699764 10367890 complement(6395446..6396399) 1 NC_015312.1 KEGG: fre:Franean1_4746 3-(2,3-dihydroxyphenyl)propionate dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; 3-carboxyethylcatechol 2,3-dioxygenase 6396399 10367890 Psed_6036 Pseudonocardia dioxanivorans CB1190 3-carboxyethylcatechol 2,3-dioxygenase YP_004336003.1 6395446 R 675635 CDS YP_004336004.1 331699765 10367891 complement(6396402..6397487) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: ara:Arad_7171 luciferase; luciferase-like protein 6397487 10367891 Psed_6037 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004336004.1 6396402 R 675635 CDS YP_004336005.1 331699766 10367892 complement(6397612..6398604) 1 NC_015312.1 KEGG: mjl:Mjls_1672 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6398604 10367892 Psed_6038 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004336005.1 6397612 R 675635 CDS YP_004336006.1 331699767 10367893 complement(6398931..6400163) 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_6110 transposase; transposase IS111A/IS1328/IS1533 6400163 10367893 Psed_6039 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004336006.1 6398931 R 675635 CDS YP_004336007.1 331699768 10367895 complement(6400643..6401434) 1 NC_015312.1 KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 6401434 10367895 Psed_6041 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004336007.1 6400643 R 675635 CDS YP_004336008.1 331699769 10367896 complement(6401431..6403077) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 6403077 10367896 Psed_6042 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336008.1 6401431 R 675635 CDS YP_004336009.1 331699770 10367898 complement(6404134..6404451) 1 NC_015312.1 KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator 6404451 10367898 Psed_6044 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004336009.1 6404134 R 675635 CDS YP_004336010.1 331699771 10367899 complement(6404448..6405536) 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: msp:Mspyr1_54040 site-specific recombinase XerD; integrase protein 6405536 10367899 Psed_6045 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004336010.1 6404448 R 675635 CDS YP_004336011.1 331699772 10367901 6405987..6407171 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit 6407171 10367901 Psed_6047 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336011.1 6405987 D 675635 CDS YP_004336012.1 331699773 10367903 6407913..6409157 1 NC_015312.1 PFAM: Transposase, mutator type; KEGG: gob:Gobs_2905 transposase mutator type; transposase mutator type 6409157 10367903 Psed_6049 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004336012.1 6407913 D 675635 CDS YP_004336013.1 331699774 10367905 complement(6409832..6411250) 1 NC_015312.1 PFAM: Amidase; KEGG: rme:Rmet_3556 amidase; amidase 6411250 10367905 Psed_6051 Pseudonocardia dioxanivorans CB1190 amidase YP_004336013.1 6409832 R 675635 CDS YP_004336014.1 331699775 10367906 complement(6411490..6412344) 1 NC_015312.1 TIGRFAM: 3-oxoadipate enol-lactonase; KEGG: rxy:Rxyl_1578 3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase fold-1; 3-oxoadipate enol-lactonase 6412344 10367906 Psed_6052 Pseudonocardia dioxanivorans CB1190 3-oxoadipate enol-lactonase YP_004336014.1 6411490 R 675635 CDS YP_004336015.1 331699776 10367907 complement(6412371..6412853) 1 NC_015312.1 KEGG: rha:RHA1_ro02523 hypothetical protein; hypothetical protein 6412853 10367907 Psed_6053 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336015.1 6412371 R 675635 CDS YP_004336016.1 331699777 10367908 complement(6412850..6413689) 1 NC_015312.1 TIGRFAM: Cytidyltransferase-related; KEGG: nml:Namu_2214 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; cytidyltransferase-related domain-containing protein 6413689 10367908 Psed_6054 Pseudonocardia dioxanivorans CB1190 cytidyltransferase-related domain-containing protein YP_004336016.1 6412850 R 675635 CDS YP_004336017.1 331699778 10367909 complement(6413686..6413868) 1 NC_015312.1 hypothetical protein 6413868 10367909 Psed_6055 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336017.1 6413686 R 675635 CDS YP_004336018.1 331699779 10367910 complement(6413865..6415163) 1 NC_015312.1 KEGG: rxy:Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 6415163 10367910 Psed_6056 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004336018.1 6413865 R 675635 CDS YP_004336019.1 331699780 10367911 complement(6415176..6416240) 1 NC_015312.1 manually curated; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: bts:Btus_2062 alcohol dehydrogenase GroES domain protein; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES 6416240 10367911 Psed_6057 Pseudonocardia dioxanivorans CB1190 molecular chaperone GroES YP_004336019.1 6415176 R 675635 CDS YP_004336020.1 331699781 10367912 complement(6416255..6417277) 1 NC_015312.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0215 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 6417277 10367912 Psed_6058 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004336020.1 6416255 R 675635 CDS YP_004336021.1 331699782 10367913 complement(6417280..6417582) 1 NC_015312.1 PFAM: Monooxygenase component MmoB/DmpM; KEGG: fra:Francci3_0214 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 6417582 10367913 Psed_6059 Pseudonocardia dioxanivorans CB1190 monooxygenase component MmoB/DmpM YP_004336021.1 6417280 R 675635 CDS YP_004336022.1 331699783 10367914 complement(6417579..6417977) 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: fra:Francci3_0213 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) domain-containing protein 6417977 10367914 Psed_6060 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004336022.1 6417579 R 675635 CDS YP_004336023.1 331699784 10367915 complement(6417988..6418233) 1 NC_015312.1 PFAM: Toluene-4-monooxygenase system B; KEGG: bbt:BBta_1597 toluene-4-monooxygenase system protein B; Toluene-4-monooxygenase system B 6418233 10367915 Psed_6061 Pseudonocardia dioxanivorans CB1190 Toluene-4-monooxygenase system B YP_004336023.1 6417988 R 675635 CDS YP_004336024.1 331699785 10367916 complement(6418269..6419786) 1 NC_015312.1 KEGG: bts:Btus_2069 methane/phenol/toluene hydroxylase; PFAM: Methane/phenol/toluene hydroxylase; YHS; phenol 2-monooxygenase 6419786 10367916 Psed_6062 Pseudonocardia dioxanivorans CB1190 phenol 2-monooxygenase YP_004336024.1 6418269 R 675635 CDS YP_004336025.1 331699786 10367917 complement(6419937..6420224) 1 NC_015312.1 TIGRFAM: Muconolactone delta-isomerase; KEGG: rer:RER_54210 muconolactone isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase 6420224 10367917 Psed_6063 Pseudonocardia dioxanivorans CB1190 muconolactone delta-isomerase YP_004336025.1 6419937 R 675635 CDS YP_004336026.1 331699787 10367918 complement(6420230..6421351) 1 NC_015312.1 SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: rha:RHA1_ro02372 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; muconate and chloromuconate cycloisomerase 6421351 10367918 Psed_6064 Pseudonocardia dioxanivorans CB1190 muconate and chloromuconate cycloisomerase YP_004336026.1 6420230 R 675635 CDS YP_004336027.1 331699788 10367919 complement(6421395..6422249) 1 NC_015312.1 TIGRFAM: Catechol 1,2-dioxygenase, actinobacteria; KEGG: rha:RHA1_ro02373 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; catechol 1,2-dioxygenase 6422249 10367919 Psed_6065 Pseudonocardia dioxanivorans CB1190 catechol 1,2-dioxygenase YP_004336027.1 6421395 R 675635 CDS YP_004336028.1 331699789 10367920 complement(6422278..6423873) 1 NC_015312.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: rer:RER_54270 phenol hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 6423873 10367920 Psed_6066 Pseudonocardia dioxanivorans CB1190 4-hydroxyphenylacetate 3-hydroxylase YP_004336028.1 6422278 R 675635 CDS YP_004336029.1 331699790 10367921 complement(6423915..6424487) 1 NC_015312.1 KEGG: rha:RHA1_ro08076 phenol 2-monoxygenase, reductase component; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 6424487 10367921 Psed_6067 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing FMN-binding protein YP_004336029.1 6423915 R 675635 CDS YP_004336030.1 331699791 10367922 6424597..6425415 1 NC_015312.1 TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: rer:RER_54240 transcriptional regulator CatR; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 6425415 10367922 Psed_6068 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004336030.1 6424597 D 675635 CDS YP_004336031.1 331699792 10367924 complement(6425774..6426274) 1 NC_015312.1 KEGG: cai:Caci_3238 hypothetical protein; hypothetical protein 6426274 10367924 Psed_6070 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336031.1 6425774 R 675635 CDS YP_004336032.1 331699793 10367925 6426641..6427681 1 NC_015312.1 KEGG: xtr:100497072 WAS/WASL-interacting protein family member 2-like; hypothetical protein 6427681 10367925 Psed_6071 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336032.1 6426641 D 675635 CDS YP_004336033.1 331699794 10367926 6427681..6428970 1 NC_015312.1 KEGG: tfu:Tfu_0073 chromosome partitioning ATPase; chromosome partitioning ATPase 6428970 10367926 Psed_6072 Pseudonocardia dioxanivorans CB1190 chromosome partitioning ATPase YP_004336033.1 6427681 D 675635 CDS YP_004336034.1 331699795 10367927 6428972..6430096 1 NC_015312.1 KEGG: mxa:MXAN_2883 lipoprotein; hypothetical protein 6430096 10367927 Psed_6073 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336034.1 6428972 D 675635 CDS YP_004336035.1 331699796 10367928 6430098..6431351 1 NC_015312.1 PFAM: Glycoside hydrolase, family 16; KEGG: mva:Mvan_0209 glycoside hydrolase protein; glycoside hydrolase protein 6431351 10367928 Psed_6074 Pseudonocardia dioxanivorans CB1190 glycoside hydrolase protein YP_004336035.1 6430098 D 675635 CDS YP_004336036.1 331699797 10367929 6431387..6433270 1 NC_015312.1 KEGG: lma:LmjF35.0540 proteophosphoglycan 5; hypothetical protein 6433270 10367929 Psed_6075 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336036.1 6431387 D 675635 CDS YP_004336037.1 331699798 10367931 6433771..6434721 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: mjl:Mjls_5285 phage integrase protein; integrase protein 6434721 10367931 Psed_6077 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004336037.1 6433771 D 675635 CDS YP_004336038.1 331699799 10367932 6434718..6437201 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: mjl:Mjls_5286 DNA integrase/recombinase; integrase protein 6437201 10367932 Psed_6078 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004336038.1 6434718 D 675635 CDS YP_004336039.1 331699800 10367934 6438267..6439499 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 6439499 10367934 Psed_6080 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004336039.1 6438267 D 675635 CDS YP_004336040.1 331699801 10367936 6440584..6440823 1 NC_015312.1 hypothetical protein 6440823 10367936 Psed_6082 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336040.1 6440584 D 675635 CDS YP_004336041.1 331699802 10367937 6440858..6441496 1 NC_015312.1 hypothetical protein 6441496 10367937 Psed_6083 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336041.1 6440858 D 675635 CDS YP_004336042.1 331699803 10367938 complement(6441506..6441703) 1 NC_015312.1 hypothetical protein 6441703 10367938 Psed_6084 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336042.1 6441506 R 675635 CDS YP_004336043.1 331699804 10367939 complement(6441796..6442218) 1 NC_015312.1 hypothetical protein 6442218 10367939 Psed_6085 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336043.1 6441796 R 675635 CDS YP_004336044.1 331699805 10367940 complement(6442262..6444061) 1 NC_015312.1 PFAM: Integrase, catalytic core, phage; KEGG: sna:Snas_6234 regulatory protein GntR HTH; integrase protein 6444061 10367940 Psed_6086 Pseudonocardia dioxanivorans CB1190 integrase protein YP_004336044.1 6442262 R 675635 CDS YP_004336045.1 331699806 10367944 6445383..6446168 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: kfl:Kfla_5292 ABC-2 type transporter; ABC transporter 6446168 10367944 Psed_6089 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004336045.1 6445383 D 675635 CDS YP_004336046.1 331699807 10367945 6446235..6447671 1 NC_015312.1 PFAM: Protein of unknown function DUF1212; KEGG: ami:Amir_0372 protein of unknown function DUF1212; hypothetical protein 6447671 10367945 Psed_6090 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336046.1 6446235 D 675635 CDS YP_004336047.1 331699808 10367946 6447723..6449159 1 NC_015312.1 KEGG: sen:SACE_0462 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; alpha,alpha-trehalose-phosphate synthase 6449159 10367946 Psed_6091 Pseudonocardia dioxanivorans CB1190 alpha,alpha-trehalose-phosphate synthase YP_004336047.1 6447723 D 675635 CDS YP_004336048.1 331699809 10367947 6449152..6449925 1 NC_015312.1 KEGG: ami:Amir_0370 trehalose-phosphatase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; trehalose-phosphatase 6449925 10367947 Psed_6092 Pseudonocardia dioxanivorans CB1190 trehalose-phosphatase YP_004336048.1 6449152 D 675635 CDS YP_004336049.1 331699810 10367948 complement(6449931..6451028) 1 NC_015312.1 KEGG: ami:Amir_0346 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 6451028 10367948 Psed_6093 Pseudonocardia dioxanivorans CB1190 LacI family transcriptional regulator YP_004336049.1 6449931 R 675635 CDS YP_004336050.1 331699811 10367949 6451163..6452089 1 NC_015312.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: cmi:CMM_2941 metal ABC transporter, substrate-binding protein; metal ion ABC transporter periplasmic subunit 6452089 10367949 Psed_6094 Pseudonocardia dioxanivorans CB1190 metal ion ABC transporter periplasmic subunit YP_004336050.1 6451163 D 675635 CDS YP_004336051.1 331699812 10367950 6452110..6452958 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sen:SACE_0452 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 6452958 10367950 Psed_6095 Pseudonocardia dioxanivorans CB1190 Fe(3+)-transporting ATPase YP_004336051.1 6452110 D 675635 CDS YP_004336052.1 331699813 10367951 6452955..6453833 1 NC_015312.1 PFAM: ABC-3; KEGG: ami:Amir_0354 ABC-3 protein; ABC transporter permease 6453833 10367951 Psed_6096 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004336052.1 6452955 D 675635 CDS YP_004336053.1 331699814 10367952 complement(6454003..6454992) 1 NC_015312.1 TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: nfa:nfa4390 tRNA/rRNA methyltransferase; SMART: RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase 6454992 10367952 Psed_6097 Pseudonocardia dioxanivorans CB1190 TrmH family RNA methyltransferase YP_004336053.1 6454003 R 675635 CDS YP_004336054.1 331699815 10367953 complement(6455037..6456485) 1 NC_015312.1 SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: sen:SACE_0443 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase 6456485 10367953 Psed_6098 Pseudonocardia dioxanivorans CB1190 cysteinyl-tRNA synthetase YP_004336054.1 6455037 R 675635 CDS YP_004336055.1 331699816 10367954 6456528..6456968 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nca:Noca_2629 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6456968 10367954 Psed_6099 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336055.1 6456528 D 675635 CDS YP_004336056.1 331699817 10367955 complement(6457194..6457676) 1 NC_015312.1 TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: req:REQ_06320 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6457676 10367955 Psed_6100 Pseudonocardia dioxanivorans CB1190 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_004336056.1 6457194 R 675635 CDS YP_004336057.1 331699818 10367956 complement(6457673..6458428) 1 NC_015312.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rop:ROP_43780 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6458428 10367956 Psed_6101 Pseudonocardia dioxanivorans CB1190 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004336057.1 6457673 R 675635 CDS YP_004336058.1 331699819 10367957 complement(6458470..6458964) 1 NC_015312.1 PFAM: Transcription factor CarD; KEGG: ami:Amir_0364 transcriptional regulator, CarD family; carD family transcriptional regulator 6458964 10367957 Psed_6102 Pseudonocardia dioxanivorans CB1190 carD family transcriptional regulator YP_004336058.1 6458470 R 675635 CDS YP_004336059.1 331699820 10367958 6459214..6459816 1 NC_015312.1 PFAM: DR1885-like metal-binding protein; KEGG: sen:SACE_0437 hypothetical protein; hypothetical protein 6459816 10367958 Psed_6103 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336059.1 6459214 D 675635 CDS YP_004336060.1 331699821 10367959 6459885..6461189 1 NC_015312.1 KEGG: svi:Svir_35070 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 6461189 10367959 Psed_6104 Pseudonocardia dioxanivorans CB1190 DNA repair protein RadA YP_004336060.1 6459885 D 675635 CDS YP_004336061.1 331699822 10367960 complement(6461293..6462138) 1 NC_015312.1 KEGG: gbr:Gbro_0965 hypothetical protein; hypothetical protein 6462138 10367960 Psed_6105 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336061.1 6461293 R 675635 CDS YP_004336062.1 331699823 10367962 6462982..6463866 1 NC_015312.1 KEGG: sen:SACE_0432 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; HhH-GPD family protein 6463866 10367962 Psed_6107 Pseudonocardia dioxanivorans CB1190 HhH-GPD family protein YP_004336062.1 6462982 D 675635 CDS YP_004336063.1 331699824 10367963 6463882..6464370 1 NC_015312.1 KEGG: sen:SACE_0431 hypothetical protein; hypothetical protein 6464370 10367963 Psed_6108 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336063.1 6463882 D 675635 CDS YP_004336064.1 331699825 10367964 complement(6464625..6465452) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: svi:Svir_35370 predicted hydrolase or acyltransferase of alpha/beta superfamily; alpha/beta hydrolase 6465452 10367964 Psed_6109 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004336064.1 6464625 R 675635 CDS YP_004336065.1 331699826 10367965 6465488..6465808 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: fri:FraEuI1c_2656 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 6465808 10367965 Psed_6110 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004336065.1 6465488 D 675635 CDS YP_004336066.1 331699827 10367966 6465862..6466638 1 NC_015312.1 PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; KEGG: amd:AMED_8708 SIR2 family NAD-dependent deacetylase; silent information regulator protein Sir2 6466638 10367966 Psed_6111 Pseudonocardia dioxanivorans CB1190 silent information regulator protein Sir2 YP_004336066.1 6465862 D 675635 CDS YP_004336067.1 331699828 10367967 6466760..6467434 1 NC_015312.1 KEGG: kfl:Kfla_6806 phytochrome sensor protein; phytochrome sensor protein 6467434 10367967 Psed_6112 Pseudonocardia dioxanivorans CB1190 phytochrome sensor protein YP_004336067.1 6466760 D 675635 CDS YP_004336068.1 331699829 10367968 complement(6467516..6470059) 1 NC_015312.1 KEGG: sen:SACE_0414 ATP-dependent Clp protease; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; ATPase 6470059 10367968 Psed_6113 Pseudonocardia dioxanivorans CB1190 ATPase YP_004336068.1 6467516 R 675635 CDS YP_004336069.1 331699830 10367969 complement(6470250..6471125) 1 NC_015312.1 PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: sro:Sros_5976 iron transport/utilisation related protein; FAD-binding 9 siderophore-interacting domain-containing protein 6471125 10367969 Psed_6114 Pseudonocardia dioxanivorans CB1190 FAD-binding 9 siderophore-interacting domain-containing protein YP_004336069.1 6470250 R 675635 CDS YP_004336070.1 331699831 10367970 complement(6471335..6471676) 1 NC_015312.1 KEGG: ami:Amir_0330 hypothetical protein; hypothetical protein 6471676 10367970 Psed_6115 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336070.1 6471335 R 675635 CDS YP_004336071.1 331699832 10367971 complement(6471818..6473320) 1 NC_015312.1 PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase, class II; KEGG: gob:Gobs_0637 lysyl-tRNA synthetase; lysyl-tRNA synthetase 6473320 10367971 Psed_6116 Pseudonocardia dioxanivorans CB1190 lysyl-tRNA synthetase YP_004336071.1 6471818 R 675635 CDS YP_004336072.1 331699833 10367972 complement(6473476..6474354) 1 NC_015312.1 PFAM: Type III pantothenate kinase; TIGRFAM: Type III pantothenate kinase; HAMAP: Type III pantothenate kinase; KEGG: sen:SACE_0408 accessory factor Bvg; Baf family transcriptional acitvator 6474354 10367972 Psed_6117 Pseudonocardia dioxanivorans CB1190 Baf family transcriptional acitvator YP_004336072.1 6473476 R 675635 CDS YP_004336073.1 331699834 10367973 complement(6474360..6474785) 1 NC_015312.1 PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: amd:AMED_8737 aspartate 1-decarboxylase; aspartate 1-decarboxylase 6474785 10367973 Psed_6118 Pseudonocardia dioxanivorans CB1190 aspartate 1-decarboxylase YP_004336073.1 6474360 R 675635 CDS YP_004336074.1 331699835 10367974 complement(6474799..6475680) 1 NC_015312.1 TIGRFAM: Pantoate-beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase; KEGG: svi:Svir_35550 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantothenate synthetase 6475680 10367974 Psed_6119 Pseudonocardia dioxanivorans CB1190 pantothenate synthetase YP_004336074.1 6474799 R 675635 CDS YP_004336075.1 331699836 10367975 complement(6475677..6476570) 1 NC_015312.1 PFAM: oxidoreductase/dehydrogenase, Rossmann-like domain; Domain of unknown function DUF2520; KEGG: amd:AMED_8739 oxidoreductase; oxidoreductase/dehydrogenase, Rossmann-like domain-containing protein 6476570 10367975 Psed_6120 Pseudonocardia dioxanivorans CB1190 oxidoreductase/dehydrogenase, Rossmann-like domain-containing protein YP_004336075.1 6475677 R 675635 CDS YP_004336076.1 331699837 10367976 complement(6476769..6478142) 1 NC_015312.1 KEGG: ami:Amir_0323 hypothetical protein; hypothetical protein 6478142 10367976 Psed_6121 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336076.1 6476769 R 675635 CDS YP_004336077.1 331699838 10367977 complement(6478185..6478664) 1 NC_015312.1 KEGG: sen:SACE_0402 hypothetical protein; hypothetical protein 6478664 10367977 Psed_6122 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336077.1 6478185 R 675635 CDS YP_004336078.1 331699839 10367978 complement(6478661..6479185) 1 NC_015312.1 TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: sen:SACE_0400 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 6479185 10367978 Psed_6123 Pseudonocardia dioxanivorans CB1190 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004336078.1 6478661 R 675635 CDS YP_004336079.1 331699840 10367979 complement(6479182..6479580) 1 NC_015312.1 SMART: Dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; KEGG: mjl:Mjls_5153 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; dihydroneopterin aldolase 6479580 10367979 Psed_6124 Pseudonocardia dioxanivorans CB1190 dihydroneopterin aldolase YP_004336079.1 6479182 R 675635 CDS YP_004336080.1 331699841 10367980 complement(6479577..6480440) 1 NC_015312.1 TIGRFAM: Dihydropteroate synthase; KEGG: svi:Svir_35630 dihydropteroate synthase; PFAM: Pterin-binding; dihydropteroate synthase 6480440 10367980 Psed_6125 Pseudonocardia dioxanivorans CB1190 dihydropteroate synthase YP_004336080.1 6479577 R 675635 CDS YP_004336081.1 331699842 10367981 complement(6480444..6481061) 1 NC_015312.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: mva:Mvan_5371 GTP cyclohydrolase I; GTP cyclohydrolase I 6481061 10367981 Psed_6126 Pseudonocardia dioxanivorans CB1190 GTP cyclohydrolase I YP_004336081.1 6480444 R 675635 CDS YP_004336082.1 331699843 10367982 complement(6481064..6483520) 1 NC_015312.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: amd:AMED_8748 cell division protease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH 6483520 10367982 Psed_6127 Pseudonocardia dioxanivorans CB1190 ATP-dependent metalloprotease FtsH YP_004336082.1 6481064 R 675635 CDS YP_004336083.1 331699844 10367983 6483879..6484826 1 NC_015312.1 KEGG: uma:UM02006.1 hypothetical protein; hypothetical protein 6484826 10367983 Psed_6128 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336083.1 6483879 D 675635 CDS YP_004336084.1 331699845 10367984 complement(6484851..6485411) 1 NC_015312.1 TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: sen:SACE_0395 hypoxanthine-guanine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 6485411 10367984 Psed_6129 Pseudonocardia dioxanivorans CB1190 hypoxanthine phosphoribosyltransferase YP_004336084.1 6484851 R 675635 CDS YP_004336085.1 331699846 10367985 complement(6485488..6486474) 1 NC_015312.1 TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: Lysidine-tRNA(Ile) synthetase; KEGG: amd:AMED_8754 cell cycle protein MesJ; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; tRNA(Ile)-lysidine synthase 6486474 10367985 Psed_6130 Pseudonocardia dioxanivorans CB1190 tRNA(Ile)-lysidine synthase YP_004336085.1 6485488 R 675635 CDS YP_004336086.1 331699847 10367986 complement(6486485..6487546) 1 NC_015312.1 KEGG: svi:Svir_35720 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP003883, coenzyme F420 biosynthesis associated; Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342; hypothetical protein 6487546 10367986 Psed_6131 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336086.1 6486485 R 675635 CDS YP_004336087.1 331699848 10367987 complement(6487663..6489078) 1 NC_015312.1 KEGG: sen:SACE_0392 hypothetical protein; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 6489078 10367987 Psed_6132 Pseudonocardia dioxanivorans CB1190 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_004336087.1 6487663 R 675635 CDS YP_004336088.1 331699849 10367988 6489240..6489743 1 NC_015312.1 HAMAP: Inorganic pyrophosphatase; KEGG: sen:SACE_0391 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase 6489743 10367988 Psed_6133 Pseudonocardia dioxanivorans CB1190 inorganic pyrophosphatase YP_004336088.1 6489240 D 675635 CDS YP_004336089.1 331699850 10367989 complement(6489857..6490699) 1 NC_015312.1 KEGG: kfl:Kfla_6903 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 6490699 10367989 Psed_6134 Pseudonocardia dioxanivorans CB1190 ureidoglycolate lyase YP_004336089.1 6489857 R 675635 CDS YP_004336090.1 331699851 10367990 complement(6490696..6491088) 1 NC_015312.1 PFAM: Endoribonuclease L-PSP; KEGG: tbi:Tbis_2099 endoribonuclease L-PSP; endoribonuclease L-PSP 6491088 10367990 Psed_6135 Pseudonocardia dioxanivorans CB1190 endoribonuclease L-PSP YP_004336090.1 6490696 R 675635 CDS YP_004336091.1 331699852 10367991 complement(6491075..6492292) 1 NC_015312.1 PFAM: vWA containing CoxE-like; KEGG: tro:trd_1210 VWA domain containing CoxE-like protein; von Willebrand factor A 6492292 10367991 Psed_6136 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004336091.1 6491075 R 675635 CDS YP_004336092.1 331699853 10367992 complement(6492289..6493209) 1 NC_015312.1 KEGG: aeh:Mlg_1565 ATPase; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 6493209 10367992 Psed_6137 Pseudonocardia dioxanivorans CB1190 ATPase YP_004336092.1 6492289 R 675635 CDS YP_004336093.1 331699854 10367993 complement(6493202..6493804) 1 NC_015312.1 KEGG: ttr:Tter_2234 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 6493804 10367993 Psed_6138 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336093.1 6493202 R 675635 CDS YP_004336094.1 331699855 10367994 complement(6493804..6494640) 1 NC_015312.1 PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: rca:Rcas_0841 molybdopterin dehydrogenase FAD-binding; molybdopterin dehydrogenase FAD-binding protein 6494640 10367994 Psed_6139 Pseudonocardia dioxanivorans CB1190 molybdopterin dehydrogenase FAD-binding protein YP_004336094.1 6493804 R 675635 CDS YP_004336095.1 331699856 10367995 complement(6494640..6497132) 1 NC_015312.1 KEGG: cwo:Cwoe_4103 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 6497132 10367995 Psed_6140 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336095.1 6494640 R 675635 CDS YP_004336096.1 331699857 10367996 complement(6497143..6497547) 1 NC_015312.1 hypothetical protein 6497547 10367996 Psed_6141 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336096.1 6497143 R 675635 CDS YP_004336097.1 331699858 10367997 complement(6497558..6498688) 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: rhi:NGR_b01290 monooxygenase; FAD dependent oxidoreductase 6498688 10367997 Psed_6142 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004336097.1 6497558 R 675635 CDS YP_004336098.1 331699859 10367998 complement(6498738..6500156) 1 NC_015312.1 PFAM: Amino acid permease domain; KEGG: dae:Dtox_3628 amino acid permease-associated region; amino acid permease 6500156 10367998 Psed_6143 Pseudonocardia dioxanivorans CB1190 amino acid permease YP_004336098.1 6498738 R 675635 CDS YP_004336099.1 331699860 10367999 complement(6500231..6501670) 1 NC_015312.1 PFAM: Amidohydrolase 1; KEGG: ppu:PP_3194 hypothetical protein; amidohydrolase 6501670 10367999 Psed_6144 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004336099.1 6500231 R 675635 CDS YP_004336100.1 331699861 10368000 complement(6501871..6504939) 1 NC_015312.1 PFAM: Bacterial transcriptional activator domain; KEGG: ach:Achl_4571 transcriptional activator domain protein; transcriptional activator domain-containing protein 6504939 10368000 Psed_6145 Pseudonocardia dioxanivorans CB1190 transcriptional activator domain-containing protein YP_004336100.1 6501871 R 675635 CDS YP_004336101.1 331699862 10368001 6505004..6505831 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: ttr:Tter_0115 alpha/beta hydrolase fold protein; alpha/beta hydrolase 6505831 10368001 Psed_6146 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004336101.1 6505004 D 675635 CDS YP_004336102.1 331699863 10368002 complement(6505943..6506503) 1 NC_015312.1 KEGG: amd:AMED_9127 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 6506503 10368002 Psed_6147 Pseudonocardia dioxanivorans CB1190 MarR family transcriptional regulator YP_004336102.1 6505943 R 675635 CDS YP_004336103.1 331699864 10368003 complement(6506519..6507730) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: gob:Gobs_3827 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 6507730 10368003 Psed_6148 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004336103.1 6506519 R 675635 CDS YP_004336104.1 331699865 10368004 complement(6507790..6508302) 1 NC_015312.1 KEGG: tcu:Tcur_1474 enoyl-CoA hydratase; PFAM: MaoC-like dehydratase; enoyl-CoA hydratase 6508302 10368004 Psed_6149 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004336104.1 6507790 R 675635 CDS YP_004336105.1 331699866 10368005 6508518..6509447 1 NC_015312.1 PFAM: ATPase-like, ATP-binding domain; KEGG: fra:Francci3_0218 serine/threonine kinase anti-sigma factor; ATP-binding protein 6509447 10368005 Psed_6150 Pseudonocardia dioxanivorans CB1190 ATP-binding protein YP_004336105.1 6508518 D 675635 CDS YP_004336106.1 331699867 10368006 6509485..6510294 1 NC_015312.1 KEGG: ade:Adeh_1215 hypothetical protein; hypothetical protein 6510294 10368006 Psed_6151 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336106.1 6509485 D 675635 CDS YP_004336107.1 331699868 10368007 6510367..6511176 1 NC_015312.1 PFAM: Survival protein SurE-like phosphatase/nucleotidase; KEGG: msm:MSMEG_6820 acid phosphatase SurE; Survival protein SurE 6511176 10368007 Psed_6152 Pseudonocardia dioxanivorans CB1190 Survival protein SurE YP_004336107.1 6510367 D 675635 CDS YP_004336108.1 331699869 10368008 6511266..6511433 1 NC_015312.1 hypothetical protein 6511433 10368008 Psed_6153 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336108.1 6511266 D 675635 CDS YP_004336109.1 331699870 10368009 complement(6511483..6511872) 1 NC_015312.1 KEGG: amd:AMED_4129 hypothetical protein; hypothetical protein 6511872 10368009 Psed_6154 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336109.1 6511483 R 675635 CDS YP_004336110.1 331699871 10368010 complement(6511916..6513064) 1 NC_015312.1 KEGG: sen:SACE_7037 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 6513064 10368010 Psed_6155 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004336110.1 6511916 R 675635 CDS YP_004336111.1 331699872 10368011 complement(6513068..6515068) 1 NC_015312.1 PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: amd:AMED_7921 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit; SMART: Biotin carboxylase, C-terminal; methylcrotonoyl-CoA carboxylase 6515068 10368011 Psed_6156 Pseudonocardia dioxanivorans CB1190 methylcrotonoyl-CoA carboxylase YP_004336111.1 6513068 R 675635 CDS YP_004336112.1 331699873 10368012 complement(6515175..6516767) 1 NC_015312.1 KEGG: ami:Amir_6230 propionyl-CoA carboxylase; PFAM: Carboxyl transferase; methylcrotonoyl-CoA carboxylase 6516767 10368012 Psed_6157 Pseudonocardia dioxanivorans CB1190 methylcrotonoyl-CoA carboxylase YP_004336112.1 6515175 R 675635 CDS YP_004336113.1 331699874 10368013 6516954..6517190 1 NC_015312.1 hypothetical protein 6517190 10368013 Psed_6158 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336113.1 6516954 D 675635 CDS YP_004336114.1 331699875 10368014 6517298..6517882 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msp:Mspyr1_19800 transcriptional regulator, TetR family; TetR family transcriptional regulator 6517882 10368014 Psed_6159 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336114.1 6517298 D 675635 CDS YP_004336115.1 331699876 10368015 complement(6518065..6519987) 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: ami:Amir_4284 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 6519987 10368015 Psed_6160 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004336115.1 6518065 R 675635 CDS YP_004336116.1 331699877 10368016 complement(6520040..6520858) 1 NC_015312.1 PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting; KEGG: aau:AAur_0386 iron-chelator utilization protein; Siderophore-interacting protein 6520858 10368016 Psed_6161 Pseudonocardia dioxanivorans CB1190 Siderophore-interacting protein YP_004336116.1 6520040 R 675635 CDS YP_004336117.1 331699878 10368017 complement(6520938..6521162) 1 NC_015312.1 KEGG: fre:Franean1_5943 MbtH domain-containing protein; PFAM: MbtH-like protein; SMART: MbtH-like protein; balhimycin biosynthetic protein MbtH 6521162 10368017 Psed_6162 Pseudonocardia dioxanivorans CB1190 balhimycin biosynthetic protein MbtH YP_004336117.1 6520938 R 675635 CDS YP_004336118.1 331699879 10368018 6521342..6521680 1 NC_015312.1 KEGG: stp:Strop_2011 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 6521680 10368018 Psed_6163 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004336118.1 6521342 D 675635 CDS YP_004336119.1 331699880 10368019 6521781..6524567 1 NC_015312.1 HAMAP: Phosphoenolpyruvate carboxylase, bacterial/plant-type; KEGG: fal:FRAAL0594 phosphoenolpyruvate carboxylase (PEPCase) (PepC); PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 6524567 10368019 Psed_6164 Pseudonocardia dioxanivorans CB1190 phosphoenolpyruvate carboxylase YP_004336119.1 6521781 D 675635 CDS YP_004336120.1 331699881 10368020 6524619..6525377 1 NC_015312.1 KEGG: ach:Achl_0177 LamB/YcsF family protein; HAMAP: Uncharacterised protein family UPF0271, LamB/YcsF; PFAM: Uncharacterised protein family UPF0271, LamB/YcsF; hypothetical protein 6525377 10368020 Psed_6165 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336120.1 6524619 D 675635 CDS YP_004336121.1 331699882 10368021 6525438..6526070 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP00370; PFAM: Allophanate hydrolase subunit 1; KEGG: nda:Ndas_3557 allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; hypothetical protein 6526070 10368021 Psed_6166 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336121.1 6525438 D 675635 CDS YP_004336122.1 331699883 10368022 6526067..6526915 1 NC_015312.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: Allophanate hydrolase subunit 2; KEGG: sen:SACE_1552 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; urea amidolyase 6526915 10368022 Psed_6167 Pseudonocardia dioxanivorans CB1190 urea amidolyase YP_004336122.1 6526067 D 675635 CDS YP_004336123.1 331699884 10368023 6527116..6528810 1 NC_015312.1 TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: svi:Svir_34570 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; phosphomethylpyrimidine synthase 6528810 10368023 Psed_6168 Pseudonocardia dioxanivorans CB1190 phosphomethylpyrimidine synthase YP_004336123.1 6527116 D 675635 CDS YP_004336124.1 331699885 10368024 complement(6528905..6529285) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_0703 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6529285 10368024 Psed_6169 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336124.1 6528905 R 675635 CDS YP_004336125.1 331699886 10368025 6529377..6529781 1 NC_015312.1 KEGG: ddr:Deide_2p01800 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 6529781 10368025 Psed_6170 Pseudonocardia dioxanivorans CB1190 regulatory protein MerR YP_004336125.1 6529377 D 675635 CDS YP_004336126.1 331699887 10368026 complement(6529803..6531290) 1 NC_015312.1 KEGG: tcu:Tcur_2183 adenylate/guanylate cyclase with integral membrane sensor; PFAM: HAMP linker domain; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: HAMP linker domain; Adenylyl cyclase class-3/4/guanylyl cyclase; guanylate cyclase 6531290 10368026 Psed_6171 Pseudonocardia dioxanivorans CB1190 guanylate cyclase YP_004336126.1 6529803 R 675635 CDS YP_004336127.1 331699888 10368027 complement(6531317..6532147) 1 NC_015312.1 PFAM: MaoC-like dehydratase; KEGG: gob:Gobs_0308 MaoC domain-containing protein dehydratase; acyl dehydratase MaoC 6532147 10368027 Psed_6172 Pseudonocardia dioxanivorans CB1190 acyl dehydratase MaoC YP_004336127.1 6531317 R 675635 CDS YP_004336128.1 331699889 10368028 complement(6532147..6533523) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gob:Gobs_0307 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 6533523 10368028 Psed_6173 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004336128.1 6532147 R 675635 CDS YP_004336129.1 331699890 10368029 complement(6533523..6534803) 1 NC_015312.1 TIGRFAM: Thiolase; KEGG: gob:Gobs_0306 acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase 6534803 10368029 Psed_6174 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004336129.1 6533523 R 675635 CDS YP_004336130.1 331699891 10368030 6534881..6535513 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: gob:Gobs_0305 TetR family transcriptional regulator; TetR family transcriptional regulator 6535513 10368030 Psed_6175 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336130.1 6534881 D 675635 CDS YP_004336131.1 331699892 10368031 6535510..6537414 1 NC_015312.1 KEGG: cai:Caci_3363 acyl-CoA oxidase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase, C-terminal; acyl-CoA oxidase 6537414 10368031 Psed_6176 Pseudonocardia dioxanivorans CB1190 acyl-CoA oxidase YP_004336131.1 6535510 D 675635 CDS YP_004336132.1 331699893 10368032 complement(6537431..6538357) 1 NC_015312.1 PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sen:SACE_4681 zinc-binding NADP-dependent dehydrogenase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 6538357 10368032 Psed_6177 Pseudonocardia dioxanivorans CB1190 NADPH:quinone reductase YP_004336132.1 6537431 R 675635 CDS YP_004336133.1 331699894 10368033 complement(6538532..6539140) 1 NC_015312.1 KEGG: xce:Xcel_3194 hypothetical protein; hypothetical protein 6539140 10368033 Psed_6178 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336133.1 6538532 R 675635 CDS YP_004336134.1 331699895 10368034 6539386..6540618 1 NC_015312.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_6110 transposase; transposase IS111A/IS1328/IS1533 6540618 10368034 Psed_6179 Pseudonocardia dioxanivorans CB1190 transposase IS111A/IS1328/IS1533 YP_004336134.1 6539386 D 675635 CDS YP_004336135.1 331699896 10368035 complement(6540596..6540694) 1 NC_015312.1 hypothetical protein 6540694 10368035 Psed_6180 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336135.1 6540596 R 675635 CDS YP_004336136.1 331699897 10368036 complement(6540701..6541816) 1 NC_015312.1 PFAM: Domain of unknown function DUF1205; KEGG: sec:SC2704 glycosyl transferase, related to UDP-glucuronosyltransferase; hypothetical protein 6541816 10368036 Psed_6181 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336136.1 6540701 R 675635 CDS YP_004336137.1 331699898 10368037 complement(6541835..6542998) 1 NC_015312.1 KEGG: ach:Achl_2244 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; kynurenine--oxoglutarate transaminase 6542998 10368037 Psed_6182 Pseudonocardia dioxanivorans CB1190 kynurenine--oxoglutarate transaminase YP_004336137.1 6541835 R 675635 CDS YP_004336138.1 331699899 10368038 6543076..6544179 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 6544179 10368038 Psed_6183 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336138.1 6543076 D 675635 CDS YP_004336139.1 331699900 10368039 complement(6544187..6545818) 1 NC_015312.1 KEGG: sen:SACE_3554 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Alpha/beta hydrolase fold-1; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 6545818 10368039 Psed_6184 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004336139.1 6544187 R 675635 CDS YP_004336140.1 331699901 10368040 6545906..6547246 1 NC_015312.1 KEGG: gob:Gobs_3432 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; Bcr/CflA subfamily drug resistance transporter 6547246 10368040 Psed_6185 Pseudonocardia dioxanivorans CB1190 Bcr/CflA subfamily drug resistance transporter YP_004336140.1 6545906 D 675635 CDS YP_004336141.1 331699902 10368042 complement(6547475..6548008) 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: sen:SACE_0174 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 6548008 10368042 Psed_6187 Pseudonocardia dioxanivorans CB1190 PadR-like family transcriptional regulator YP_004336141.1 6547475 R 675635 CDS YP_004336142.1 331699903 10368043 6548128..6549504 1 NC_015312.1 KEGG: fal:FRAAL0273 dioxygenase; PFAM: Carotenoid oxygenase; 9-cis-epoxycarotenoid dioxygenase 6549504 10368043 Psed_6188 Pseudonocardia dioxanivorans CB1190 9-cis-epoxycarotenoid dioxygenase YP_004336142.1 6548128 D 675635 CDS YP_004336143.1 331699904 10368044 6549506..6550174 1 NC_015312.1 KEGG: sen:SACE_0172 hypothetical protein; hypothetical protein 6550174 10368044 Psed_6189 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336143.1 6549506 D 675635 CDS YP_004336144.1 331699905 10368045 6550337..6551026 1 NC_015312.1 KEGG: fri:FraEuI1c_3823 PASTA domain containing protein; PFAM: PASTA; SMART: PASTA; protein PASTA domain-containing protein 6551026 10368045 Psed_6190 Pseudonocardia dioxanivorans CB1190 protein PASTA domain-containing protein YP_004336144.1 6550337 D 675635 CDS YP_004336145.1 331699906 10368046 complement(6551137..6551487) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_2674 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6551487 10368046 Psed_6191 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336145.1 6551137 R 675635 CDS YP_004336146.1 331699907 10368047 complement(6551484..6552167) 1 NC_015312.1 PFAM: Protein of unknown function DUF161; KEGG: ami:Amir_6791 protein of unknown function DUF161; hypothetical protein 6552167 10368047 Psed_6192 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336146.1 6551484 R 675635 CDS YP_004336147.1 331699908 10368048 6552294..6554186 1 NC_015312.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: sgr:SGR_6589 ABC transporter ATPase and permease component; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 6554186 10368048 Psed_6193 Pseudonocardia dioxanivorans CB1190 xenobiotic-transporting ATPase YP_004336147.1 6552294 D 675635 CDS YP_004336148.1 331699909 10368049 complement(6554201..6554497) 1 NC_015312.1 KEGG: sro:Sros_9035 hypothetical protein; hypothetical protein 6554497 10368049 Psed_6194 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336148.1 6554201 R 675635 CDS YP_004336149.1 331699910 10368050 6554559..6555233 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_9036 transcriptional regulator, TetR family; TetR family transcriptional regulator 6555233 10368050 Psed_6195 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336149.1 6554559 D 675635 CDS YP_004336150.1 331699911 10368051 complement(6555272..6555760) 1 NC_015312.1 PFAM: Domain of unknown function DUF151; KEGG: svi:Svir_22570 hypothetical protein; hypothetical protein 6555760 10368051 Psed_6196 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336150.1 6555272 R 675635 CDS YP_004336151.1 331699912 10368052 complement(6555860..6557173) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mmi:MMAR_2797 sialic acid-transport integral membrane protein NanT; major facilitator superfamily protein 6557173 10368052 Psed_6197 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004336151.1 6555860 R 675635 CDS YP_004336152.1 331699913 10368053 6557307..6557774 1 NC_015312.1 KEGG: smd:Smed_2207 hypothetical protein; hypothetical protein 6557774 10368053 Psed_6198 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336152.1 6557307 D 675635 CDS YP_004336153.1 331699914 10368054 6557779..6558996 1 NC_015312.1 KEGG: tcu:Tcur_3194 heat shock protein DnaJ domain-containing protein; molecular chaperone DnaJ 6558996 10368054 Psed_6199 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaJ YP_004336153.1 6557779 D 675635 CDS YP_004336154.1 331699915 10368055 complement(6559003..6559641) 1 NC_015312.1 PFAM: PspA/IM30; KEGG: fra:Francci3_2228 phage shock protein A, PspA; PspA/IM30 family protein 6559641 10368055 Psed_6200 Pseudonocardia dioxanivorans CB1190 PspA/IM30 family protein YP_004336154.1 6559003 R 675635 CDS YP_004336155.1 331699916 10368056 complement(6559657..6561147) 1 NC_015312.1 KEGG: nml:Namu_4252 amino acid/peptide transporter; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter; amino acid/peptide transporter 6561147 10368056 Psed_6201 Pseudonocardia dioxanivorans CB1190 amino acid/peptide transporter YP_004336155.1 6559657 R 675635 CDS YP_004336156.1 331699917 10368057 complement(6561318..6562370) 1 NC_015312.1 KEGG: bbt:BBta_1128 monooxygenase of the alternative pyrimidine degradation pathway; TIGRFAM: Luciferase-like, pyrimidine utilisation protein RutA; PFAM: Luciferase-like, subgroup; pyrimidine utilization protein A 6562370 10368057 Psed_6202 Pseudonocardia dioxanivorans CB1190 pyrimidine utilization protein A YP_004336156.1 6561318 R 675635 CDS YP_004336157.1 331699918 10368058 complement(6562372..6563421) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: hje:HacjB3_02270 luciferase-like monooxygenase; luciferase-like protein 6563421 10368058 Psed_6203 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004336157.1 6562372 R 675635 CDS YP_004336158.1 331699919 10368059 complement(6563411..6564805) 1 NC_015312.1 PFAM: MmgE/PrpD; KEGG: bxe:Bxe_A4086 hypothetical protein; MmgE/PrpD family protein 6564805 10368059 Psed_6204 Pseudonocardia dioxanivorans CB1190 MmgE/PrpD family protein YP_004336158.1 6563411 R 675635 CDS YP_004336159.1 331699920 10368060 complement(6564821..6566245) 1 NC_015312.1 PFAM: Amidase; KEGG: sro:Sros_0559 amidase; amidase 6566245 10368060 Psed_6205 Pseudonocardia dioxanivorans CB1190 amidase YP_004336159.1 6564821 R 675635 CDS YP_004336160.1 331699921 10368061 complement(6566242..6566460) 1 NC_015312.1 hypothetical protein 6566460 10368061 Psed_6206 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336160.1 6566242 R 675635 CDS YP_004336161.1 331699922 10368062 complement(6566457..6567620) 1 NC_015312.1 KEGG: nca:Noca_4073 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 6567620 10368062 Psed_6207 Pseudonocardia dioxanivorans CB1190 butyryl-CoA dehydrogenase YP_004336161.1 6566457 R 675635 CDS YP_004336162.1 331699923 10368063 complement(6567622..6568842) 1 NC_015312.1 KEGG: sro:Sros_6624 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 6568842 10368063 Psed_6208 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004336162.1 6567622 R 675635 CDS YP_004336163.1 331699924 10368064 6568960..6569718 1 NC_015312.1 KEGG: fre:Franean1_1994 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 6569718 10368064 Psed_6209 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004336163.1 6568960 D 675635 CDS YP_004336164.1 331699925 10368065 6570030..6571442 1 NC_015312.1 PFAM: NLP/P60; KEGG: req:REQ_28170 peptidase; NLP/P60 protein 6571442 10368065 Psed_6210 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004336164.1 6570030 D 675635 CDS YP_004336165.1 331699926 10368066 6571899..6573518 1 NC_015312.1 PFAM: NLP/P60; KEGG: mkm:Mkms_3349 NLP/P60 protein; NLP/P60 protein 6573518 10368066 Psed_6211 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004336165.1 6571899 D 675635 CDS YP_004336166.1 331699927 10368067 complement(6573554..6574552) 1 NC_015312.1 KEGG: gob:Gobs_0789 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 6574552 10368067 Psed_6212 Pseudonocardia dioxanivorans CB1190 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase YP_004336166.1 6573554 R 675635 CDS YP_004336167.1 331699928 10368068 complement(6574641..6575201) 1 NC_015312.1 KEGG: nca:Noca_0273 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; 2'-5' RNA ligase 6575201 10368068 Psed_6213 Pseudonocardia dioxanivorans CB1190 2'-5' RNA ligase YP_004336167.1 6574641 R 675635 CDS YP_004336168.1 331699929 10368069 complement(6575203..6576126) 1 NC_015312.1 KEGG: gob:Gobs_2269 beta-lactamase domain-containing protein; HAMAP: Ribonuclease Z; PFAM: Beta-lactamase-like; Ribonuclease Z 6576126 10368069 Psed_6214 Pseudonocardia dioxanivorans CB1190 Ribonuclease Z YP_004336168.1 6575203 R 675635 CDS YP_004336169.1 331699930 10368070 complement(6576131..6576592) 1 NC_015312.1 KEGG: cwo:Cwoe_4105 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 6576592 10368070 Psed_6215 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336169.1 6576131 R 675635 CDS YP_004336170.1 331699931 10368071 complement(6576602..6577402) 1 NC_015312.1 KEGG: rhi:NGR_c05970 carbon monoxide dehydrogenase medium chain; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 6577402 10368071 Psed_6216 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336170.1 6576602 R 675635 CDS YP_004336171.1 331699932 10368072 complement(6577452..6578198) 1 NC_015312.1 KEGG: fre:Franean1_2500 enoyl-CoA hydratase; PFAM: Crotonase, core; Peptidase S49; enoyl-CoA hydratase 6578198 10368072 Psed_6217 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004336171.1 6577452 R 675635 CDS YP_004336172.1 331699933 10368073 complement(6578191..6580557) 1 NC_015312.1 KEGG: sti:Sthe_2811 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 6580557 10368073 Psed_6218 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336172.1 6578191 R 675635 CDS YP_004336173.1 331699934 10368074 complement(6580554..6581318) 1 NC_015312.1 KEGG: rhi:NGR_c06050 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 6581318 10368074 Psed_6219 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004336173.1 6580554 R 675635 CDS YP_004336174.1 331699935 10368075 complement(6581330..6582124) 1 NC_015312.1 KEGG: kfl:Kfla_1519 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase 6582124 10368075 Psed_6220 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004336174.1 6581330 R 675635 CDS YP_004336175.1 331699936 10368076 complement(6582121..6583650) 1 NC_015312.1 KEGG: sen:SACE_2875 modular polyketide synthase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 6583650 10368076 Psed_6221 Pseudonocardia dioxanivorans CB1190 long-chain-fatty-acid--CoA ligase YP_004336175.1 6582121 R 675635 CDS YP_004336176.1 331699937 10368077 complement(6583704..6584303) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1887 TetR family transcriptional regulator; TetR family transcriptional regulator 6584303 10368077 Psed_6222 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336176.1 6583704 R 675635 CDS YP_004336177.1 331699938 10368078 6584428..6585192 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ami:Amir_2728 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 6585192 10368078 Psed_6223 Pseudonocardia dioxanivorans CB1190 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase YP_004336177.1 6584428 D 675635 CDS YP_004336178.1 331699939 10368079 complement(6585235..6585426) 1 NC_015312.1 hypothetical protein 6585426 10368079 Psed_6224 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336178.1 6585235 R 675635 CDS YP_004336179.1 331699940 10368080 complement(6585602..6586729) 1 NC_015312.1 PFAM: Uncharacterised conserved protein UCP007542; KEGG: rer:RER_23850 hypothetical protein; hypothetical protein 6586729 10368080 Psed_6225 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336179.1 6585602 R 675635 CDS YP_004336180.1 331699941 10368081 complement(6586726..6587637) 1 NC_015312.1 PFAM: Protein of unknown function DUF1023; KEGG: sco:SCO3760 secreted protein; hypothetical protein 6587637 10368081 Psed_6226 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336180.1 6586726 R 675635 CDS YP_004336181.1 331699942 10368082 complement(6587728..6588393) 1 NC_015312.1 KEGG: cai:Caci_8900 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6588393 10368082 Psed_6227 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336181.1 6587728 R 675635 CDS YP_004336182.1 331699943 10368083 complement(6588390..6589670) 1 NC_015312.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: ami:Amir_6236 histidine kinase; histidine kinase 6589670 10368083 Psed_6228 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004336182.1 6588390 R 675635 CDS YP_004336183.1 331699944 10368084 6589712..6590587 1 NC_015312.1 KEGG: tcu:Tcur_1622 threonine ammonia-lyase; manually curated; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 6590587 10368084 Psed_6229 Pseudonocardia dioxanivorans CB1190 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004336183.1 6589712 D 675635 CDS YP_004336184.1 331699945 10368085 complement(6590610..6591014) 1 NC_015312.1 TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: mmi:MMAR_0209 glycine cleavage system H protein GcvH_1; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein 6591014 10368085 Psed_6230 Pseudonocardia dioxanivorans CB1190 glycine cleavage system H protein YP_004336184.1 6590610 R 675635 CDS YP_004336185.1 331699946 10368086 6591255..6591875 1 NC_015312.1 KEGG: cwo:Cwoe_2578 transcriptional regulator, XRE family; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; cupin 6591875 10368086 Psed_6231 Pseudonocardia dioxanivorans CB1190 cupin YP_004336185.1 6591255 D 675635 CDS YP_004336186.1 331699947 10368087 6591930..6592928 1 NC_015312.1 PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; KEGG: scl:sce8999 hypothetical protein; AIR synthase-like protein domain-containing protein 6592928 10368087 Psed_6232 Pseudonocardia dioxanivorans CB1190 AIR synthase-like protein domain-containing protein YP_004336186.1 6591930 D 675635 CDS YP_004336187.1 331699948 10368088 6592956..6593879 1 NC_015312.1 TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: vap:Vapar_2967 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; 2-dehydropantoate 2-reductase 6593879 10368088 Psed_6233 Pseudonocardia dioxanivorans CB1190 2-dehydropantoate 2-reductase YP_004336187.1 6592956 D 675635 CDS YP_004336188.1 331699949 10368089 complement(6593895..6594965) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: sen:SACE_3003 FMN-dependent monooxygenase; luciferase-like protein 6594965 10368089 Psed_6234 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004336188.1 6593895 R 675635 CDS YP_004336189.1 331699950 10368090 complement(6594962..6595504) 1 NC_015312.1 PFAM: Polyketide cyclase/dehydrase; KEGG: amd:AMED_7647 cyclase/dehydrase; polyketide cyclase/dehydrase 6595504 10368090 Psed_6235 Pseudonocardia dioxanivorans CB1190 polyketide cyclase/dehydrase YP_004336189.1 6594962 R 675635 CDS YP_004336190.1 331699951 10368091 complement(6595566..6596744) 1 NC_015312.1 HAMAP: Phosphoglycerate kinase; KEGG: sen:SACE_2144 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 6596744 10368091 Psed_6236 Pseudonocardia dioxanivorans CB1190 phosphoglycerate kinase YP_004336190.1 6595566 R 675635 CDS YP_004336191.1 331699952 10368092 complement(6596741..6597760) 1 NC_015312.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tbi:Tbis_1993 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 6597760 10368092 Psed_6237 Pseudonocardia dioxanivorans CB1190 glyceraldehyde-3-phosphate dehydrogenase YP_004336191.1 6596741 R 675635 CDS YP_004336192.1 331699953 10368093 complement(6597848..6598630) 1 NC_015312.1 KEGG: tkm:TK90_0853 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 6598630 10368093 Psed_6238 Pseudonocardia dioxanivorans CB1190 HAD-superfamily hydrolase YP_004336192.1 6597848 R 675635 CDS YP_004336193.1 331699954 10368094 6598991..6600004 1 NC_015312.1 PFAM: Fructose-bisphosphate aldolase, class-I; KEGG: afo:Afer_0177 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase class-I 6600004 10368094 Psed_6239 Pseudonocardia dioxanivorans CB1190 fructose-bisphosphate aldolase class-I YP_004336193.1 6598991 D 675635 CDS YP_004336194.1 331699955 10368095 6600216..6601193 1 NC_015312.1 KEGG: mta:Moth_1948 carbamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; carbamate kinase 6601193 10368095 Psed_6240 Pseudonocardia dioxanivorans CB1190 carbamate kinase YP_004336194.1 6600216 D 675635 CDS YP_004336195.1 331699956 10368096 complement(6601279..6601842) 1 NC_015312.1 hypothetical protein 6601842 10368096 Psed_6241 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336195.1 6601279 R 675635 CDS YP_004336196.1 331699957 10368097 6602082..6603047 1 NC_015312.1 PFAM: Fructose-bisphosphate aldolase, class-I; KEGG: tkm:TK90_1149 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase class-I 6603047 10368097 Psed_6242 Pseudonocardia dioxanivorans CB1190 fructose-bisphosphate aldolase class-I YP_004336196.1 6602082 D 675635 CDS YP_004336197.1 331699958 10368098 complement(6603107..6604054) 1 NC_015312.1 PFAM: Phosphoribulokinase/uridine kinase; KEGG: tcu:Tcur_1650 phosphoribulokinase/uridine kinase; phosphoribulokinase/uridine kinase 6604054 10368098 Psed_6243 Pseudonocardia dioxanivorans CB1190 phosphoribulokinase/uridine kinase YP_004336197.1 6603107 R 675635 CDS YP_004336198.1 331699959 10368099 complement(6604069..6606102) 1 NC_015312.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: bts:Btus_2647 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 6606102 10368099 Psed_6244 Pseudonocardia dioxanivorans CB1190 transketolase YP_004336198.1 6604069 R 675635 CDS YP_004336199.1 331699960 10368100 6606263..6606934 1 NC_015312.1 KEGG: mjl:Mjls_1083 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6606934 10368100 Psed_6245 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336199.1 6606263 D 675635 CDS YP_004336200.1 331699961 10368101 6606960..6608225 1 NC_015312.1 KEGG: msm:MSMEG_1493 sensor histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; GAF; ATPase-like, ATP-binding domain; SMART: GAF; ATPase-like, ATP-binding domain; GAF sensor signal transduction histidine kinase 6608225 10368101 Psed_6246 Pseudonocardia dioxanivorans CB1190 GAF sensor signal transduction histidine kinase YP_004336200.1 6606960 D 675635 CDS YP_004336201.1 331699962 10368102 complement(6608376..6609686) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit 6609686 10368102 Psed_6247 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336201.1 6608376 R 675635 CDS YP_004336202.1 331699963 10368103 complement(6609831..6610856) 1 NC_015312.1 KEGG: mes:Meso_3436 fructose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase, class-I; Fructose-bisphosphate aldolase 6610856 10368103 Psed_6248 Pseudonocardia dioxanivorans CB1190 Fructose-bisphosphate aldolase YP_004336202.1 6609831 R 675635 CDS YP_004336203.1 331699964 10368104 6611028..6612458 1 NC_015312.1 HAMAP: Ribulose bisphosphate carboxylase, large subunit; KEGG: tcu:Tcur_1655 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; ribulose bisphosphate carboxylase large chain 6612458 10368104 Psed_6249 Pseudonocardia dioxanivorans CB1190 ribulose bisphosphate carboxylase large chain YP_004336203.1 6611028 D 675635 CDS YP_004336204.1 331699965 10368105 6612473..6612898 1 NC_015312.1 PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: tcu:Tcur_1656 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain; ribulose-bisphosphate carboxylase 6612898 10368105 Psed_6250 Pseudonocardia dioxanivorans CB1190 ribulose-bisphosphate carboxylase YP_004336204.1 6612473 D 675635 CDS YP_004336205.1 331699966 10368106 6612902..6613930 1 NC_015312.1 TIGRFAM: CbxX/CfqX, monofunctional; PFAM: ATPase, AAA-type, core; KEGG: tcu:Tcur_1657 CbbX protein; SMART: ATPase, AAA+ type, core; CbbX protein 6613930 10368106 Psed_6251 Pseudonocardia dioxanivorans CB1190 CbbX protein YP_004336205.1 6612902 D 675635 CDS YP_004336206.1 331699967 10368107 6613967..6614863 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcu:Tcur_1654 LysR family transcriptional regulator; LysR family transcriptional regulator 6614863 10368107 Psed_6252 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004336206.1 6613967 D 675635 CDS YP_004336207.1 331699968 10368108 6615235..6616323 1 NC_015312.1 KEGG: sti:Sthe_1846 hypothetical protein; hypothetical protein 6616323 10368108 Psed_6253 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336207.1 6615235 D 675635 CDS YP_004336208.1 331699969 10368109 complement(6616352..6617980) 1 NC_015312.1 KEGG: sti:Sthe_1229 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6617980 10368109 Psed_6254 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336208.1 6616352 R 675635 CDS YP_004336209.1 331699970 10368110 complement(6618035..6619147) 1 NC_015312.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro04494 potassium uptake protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 6619147 10368110 Psed_6255 Pseudonocardia dioxanivorans CB1190 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004336209.1 6618035 R 675635 CDS YP_004336210.1 331699971 10368111 complement(6619277..6619714) 1 NC_015312.1 KEGG: shl:Shal_0400 hypothetical protein; hypothetical protein 6619714 10368111 Psed_6256 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336210.1 6619277 R 675635 CDS YP_004336211.1 331699972 10368112 6619868..6620773 1 NC_015312.1 PFAM: Ribonuclease BN-related; KEGG: sen:SACE_6591 tRNA-processing ribonuclease BN; ribonuclease BN 6620773 10368112 Psed_6257 Pseudonocardia dioxanivorans CB1190 ribonuclease BN YP_004336211.1 6619868 D 675635 CDS YP_004336212.1 331699973 10368113 complement(6620830..6621741) 1 NC_015312.1 KEGG: req:REQ_28540 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 6621741 10368113 Psed_6258 Pseudonocardia dioxanivorans CB1190 rhodanese-like protein YP_004336212.1 6620830 R 675635 CDS YP_004336213.1 331699974 10368114 complement(6621734..6623107) 1 NC_015312.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: kra:Krad_3462 monoxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 6623107 10368114 Psed_6259 Pseudonocardia dioxanivorans CB1190 nitrilotriacetate monooxygenase FMN-dependent oxidoreductase YP_004336213.1 6621734 R 675635 CDS YP_004336214.1 331699975 10368115 complement(6623104..6624735) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: mrd:Mrad2831_3305 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 6624735 10368115 Psed_6260 Pseudonocardia dioxanivorans CB1190 monosaccharide-transporting ATPase YP_004336214.1 6623104 R 675635 CDS YP_004336215.1 331699976 10368116 complement(6624728..6625717) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: cpy:Cphy_1259 inner-membrane translocator; ABC transporter permease 6625717 10368116 Psed_6261 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004336215.1 6624728 R 675635 CDS YP_004336216.1 331699977 10368117 complement(6625714..6626595) 1 NC_015312.1 PFAM: ABC transporter permease; KEGG: sco:SCO7183 branched amino acid transport system permease; ABC transporter permease 6626595 10368117 Psed_6262 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004336216.1 6625714 R 675635 CDS YP_004336217.1 331699978 10368118 complement(6626597..6627772) 1 NC_015312.1 PFAM: Extracellular ligand-binding receptor; KEGG: dat:HRM2_46760 extracellular ligand-binding receptor; ABC transporter substrate-binding protein 6627772 10368118 Psed_6263 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004336217.1 6626597 R 675635 CDS YP_004336218.1 331699979 10368119 6628066..6628848 1 NC_015312.1 KEGG: req:REQ_28550 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 6628848 10368119 Psed_6264 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004336218.1 6628066 D 675635 CDS YP_004336219.1 331699980 10368120 complement(6628935..6629747) 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tcu:Tcur_1455 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 6629747 10368120 Psed_6265 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004336219.1 6628935 R 675635 CDS YP_004336220.1 331699981 10368121 complement(6629858..6631039) 1 NC_015312.1 KEGG: tcu:Tcur_1454 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 6631039 10368121 Psed_6266 Pseudonocardia dioxanivorans CB1190 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_004336220.1 6629858 R 675635 CDS YP_004336221.1 331699982 10368122 complement(6631039..6631788) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: tcu:Tcur_1453 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 6631788 10368122 Psed_6267 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004336221.1 6631039 R 675635 CDS YP_004336222.1 331699983 10368123 complement(6631764..6632804) 1 NC_015312.1 KEGG: tcu:Tcur_1452 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 6632804 10368123 Psed_6268 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004336222.1 6631764 R 675635 CDS YP_004336223.1 331699984 10368124 complement(6632801..6633343) 1 NC_015312.1 KEGG: tcu:Tcur_1451 hypothetical protein; hypothetical protein 6633343 10368124 Psed_6269 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336223.1 6632801 R 675635 CDS YP_004336224.1 331699985 10368125 6633669..6634292 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nfa:nfa21280 transcriptional regulator; TetR family transcriptional regulator 6634292 10368125 Psed_6270 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336224.1 6633669 D 675635 CDS YP_004336225.1 331699986 10368126 6634547..6635680 1 NC_015312.1 KEGG: amd:AMED_3568 hypothetical protein; hypothetical protein 6635680 10368126 Psed_6271 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336225.1 6634547 D 675635 CDS YP_004336226.1 331699987 10368127 6636003..6637097 1 NC_015312.1 KEGG: fre:Franean1_2312 integral membrane protein; integral membrane protein 6637097 10368127 Psed_6272 Pseudonocardia dioxanivorans CB1190 integral membrane protein YP_004336226.1 6636003 D 675635 CDS YP_004336227.1 331699988 10368129 complement(6637213..6638697) 1 NC_015312.1 PFAM: AMP-dependent synthetase/ligase; KEGG: rop:ROP_03140 hypothetical protein; AMP-dependent synthetase/ligase 6638697 10368129 Psed_6274 Pseudonocardia dioxanivorans CB1190 AMP-dependent synthetase/ligase YP_004336227.1 6637213 R 675635 CDS YP_004336228.1 331699989 10368130 complement(6638733..6639371) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_6990 TetR family transcriptional regulator; TetR family transcriptional regulator 6639371 10368130 Psed_6275 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336228.1 6638733 R 675635 CDS YP_004336229.1 331699990 10368131 6639528..6640937 1 NC_015312.1 PFAM: Protein of unknown function DUF1116; KEGG: lhk:LHK_01303 DUF1116 domain containing protein; hypothetical protein 6640937 10368131 Psed_6276 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336229.1 6639528 D 675635 CDS YP_004336230.1 331699991 10368132 6641173..6641685 1 NC_015312.1 KEGG: gob:Gobs_2618 hypothetical protein; hypothetical protein 6641685 10368132 Psed_6277 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336230.1 6641173 D 675635 CDS YP_004336231.1 331699992 10368133 complement(6641666..6642052) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: svi:Svir_19260 glyoxalase/bleomycin resistance protein/dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 6642052 10368133 Psed_6278 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336231.1 6641666 R 675635 CDS YP_004336232.1 331699993 10368134 complement(6642301..6643485) 1 NC_015312.1 PFAM: Glycosyl transferase, group 1; KEGG: scl:sce8998 secreted protein; group 1 glycosyl transferase 6643485 10368134 Psed_6279 Pseudonocardia dioxanivorans CB1190 group 1 glycosyl transferase YP_004336232.1 6642301 R 675635 CDS YP_004336233.1 331699994 10368135 complement(6643482..6645023) 1 NC_015312.1 KEGG: tro:trd_0573 protein FdrA; protein FdrA 6645023 10368135 Psed_6280 Pseudonocardia dioxanivorans CB1190 protein FdrA YP_004336233.1 6643482 R 675635 CDS YP_004336234.1 331699995 10368136 complement(6645020..6645997) 1 NC_015312.1 KEGG: kcr:Kcr_1250 carbamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; carbamate kinase 6645997 10368136 Psed_6281 Pseudonocardia dioxanivorans CB1190 carbamate kinase YP_004336234.1 6645020 R 675635 CDS YP_004336235.1 331699996 10368137 6646125..6649337 1 NC_015312.1 KEGG: tbi:Tbis_2669 winged helix family transcriptional regulator ATPase; PFAM: Signal transduction response regulator, C-terminal; Bacterial transcriptional activator domain; Tetratricopeptide TPR-1; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat; winged helix family transcriptional regulator 6649337 10368137 Psed_6282 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004336235.1 6646125 D 675635 CDS YP_004336236.1 331699997 10368138 complement(6649379..6649918) 1 NC_015312.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: rle:RL0658 hypothetical protein; GCN5-like N-acetyltransferase 6649918 10368138 Psed_6283 Pseudonocardia dioxanivorans CB1190 GCN5-like N-acetyltransferase YP_004336236.1 6649379 R 675635 CDS YP_004336237.1 331699998 10368139 complement(6649915..6650565) 1 NC_015312.1 hypothetical protein 6650565 10368139 Psed_6284 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336237.1 6649915 R 675635 CDS YP_004336238.1 331699999 10368140 complement(6650672..6651157) 1 NC_015312.1 KEGG: bge:BC1002_5635 hypothetical protein; hypothetical protein 6651157 10368140 Psed_6285 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336238.1 6650672 R 675635 CDS YP_004336239.1 331700000 10368141 complement(6651197..6651460) 1 NC_015312.1 hypothetical protein 6651460 10368141 Psed_6286 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336239.1 6651197 R 675635 CDS YP_004336240.1 331700001 10368142 complement(6651463..6652809) 1 NC_015312.1 KEGG: mmg:MTBMA_c17440 dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; CoA-disulfide reductase 6652809 10368142 Psed_6287 Pseudonocardia dioxanivorans CB1190 CoA-disulfide reductase YP_004336240.1 6651463 R 675635 CDS YP_004336241.1 331700002 10368143 complement(6653071..6653856) 1 NC_015312.1 KEGG: nca:Noca_4839 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA; phosphosulfolactate synthase 6653856 10368143 Psed_6288 Pseudonocardia dioxanivorans CB1190 phosphosulfolactate synthase YP_004336241.1 6653071 R 675635 CDS YP_004336242.1 331700003 10368144 complement(6653942..6654199) 1 NC_015312.1 KEGG: amd:AMED_5011 hypothetical protein; hypothetical protein 6654199 10368144 Psed_6289 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336242.1 6653942 R 675635 CDS YP_004336243.1 331700004 10368145 complement(6654205..6654957) 1 NC_015312.1 PFAM: Dienelactone hydrolase; KEGG: ace:Acel_1423 carboxymethylenebutenolidase; dienelactone hydrolase 6654957 10368145 Psed_6290 Pseudonocardia dioxanivorans CB1190 dienelactone hydrolase YP_004336243.1 6654205 R 675635 CDS YP_004336244.1 331700005 10368146 complement(6655019..6656377) 1 NC_015312.1 KEGG: dak:DaAHT2_2657 phosphonopyruvate decarboxylase-related protein; PFAM: Bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme; phosphoglycerate mutase 6656377 10368146 Psed_6291 Pseudonocardia dioxanivorans CB1190 phosphoglycerate mutase YP_004336244.1 6655019 R 675635 CDS YP_004336245.1 331700006 10368147 complement(6656374..6656916) 1 NC_015312.1 TIGRFAM: Cytidyltransferase-related; KEGG: pca:Pcar_0825 nicotinamide mononucleotide adenylyltransferase, OrfX-like; cytidyltransferase-related domain-containing protein 6656916 10368147 Psed_6292 Pseudonocardia dioxanivorans CB1190 cytidyltransferase-related domain-containing protein YP_004336245.1 6656374 R 675635 CDS YP_004336246.1 331700007 10368148 complement(6656913..6658163) 1 NC_015312.1 KEGG: ppw:PputW619_3157 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; isovaleryl-CoA dehydrogenase 6658163 10368148 Psed_6293 Pseudonocardia dioxanivorans CB1190 isovaleryl-CoA dehydrogenase YP_004336246.1 6656913 R 675635 CDS YP_004336247.1 331700008 10368150 complement(6658812..6659537) 1 NC_015312.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: sco:SCO0804 hypothetical protein; LmbE family protein 6659537 10368150 Psed_6295 Pseudonocardia dioxanivorans CB1190 LmbE family protein YP_004336247.1 6658812 R 675635 CDS YP_004336248.1 331700009 10368151 complement(6659534..6660637) 1 NC_015312.1 PFAM: Domain of unknown function DUF88; KEGG: mil:ML5_5375 hypothetical protein; hypothetical protein 6660637 10368151 Psed_6296 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336248.1 6659534 R 675635 CDS YP_004336249.1 331700010 10368152 complement(6660693..6661151) 1 NC_015312.1 PFAM: Helix-turn-helix, HxlR type; KEGG: cai:Caci_1043 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 6661151 10368152 Psed_6297 Pseudonocardia dioxanivorans CB1190 HxlR family transcriptional regulator YP_004336249.1 6660693 R 675635 CDS YP_004336250.1 331700011 10368153 6661235..6661936 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_1314 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 6661936 10368153 Psed_6298 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004336250.1 6661235 D 675635 CDS YP_004336251.1 331700012 10368154 complement(6661943..6664741) 1 NC_015312.1 KEGG: ami:Amir_5315 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6664741 10368154 Psed_6299 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336251.1 6661943 R 675635 CDS YP_004336252.1 331700013 10368155 6664880..6665386 1 NC_015312.1 PFAM: Cupin 2, conserved barrel; KEGG: ace:Acel_0692 cupin 2 domain-containing protein; cupin 6665386 10368155 Psed_6300 Pseudonocardia dioxanivorans CB1190 cupin YP_004336252.1 6664880 D 675635 CDS YP_004336253.1 331700014 10368156 complement(6665415..6666158) 1 NC_015312.1 PFAM: Dienelactone hydrolase; KEGG: mjl:Mjls_2098 dienelactone hydrolase; dienelactone hydrolase 6666158 10368156 Psed_6301 Pseudonocardia dioxanivorans CB1190 dienelactone hydrolase YP_004336253.1 6665415 R 675635 CDS YP_004336254.1 331700015 10368157 6666463..6667200 1 NC_015312.1 KEGG: ami:Amir_3938 hypothetical protein; hypothetical protein 6667200 10368157 Psed_6302 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336254.1 6666463 D 675635 CDS YP_004336255.1 331700016 10368158 complement(6667190..6667546) 1 NC_015312.1 KEGG: amd:AMED_4489 ATP-dependent DNA ligase; ATP-dependent DNA ligase 6667546 10368158 Psed_6303 Pseudonocardia dioxanivorans CB1190 ATP-dependent DNA ligase YP_004336255.1 6667190 R 675635 CDS YP_004336256.1 331700017 10368159 complement(6667577..6669388) 1 NC_015312.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: nfa:nfa29480 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 6669388 10368159 Psed_6304 Pseudonocardia dioxanivorans CB1190 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004336256.1 6667577 R 675635 CDS YP_004336257.1 331700018 10368161 6669808..6671757 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: mxa:MXAN_2150 beta-lactamase; beta-lactamase 6671757 10368161 Psed_6306 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004336257.1 6669808 D 675635 CDS YP_004336258.1 331700019 10368162 6671788..6672204 1 NC_015312.1 KEGG: sna:Snas_0649 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 6672204 10368162 Psed_6307 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004336258.1 6671788 D 675635 CDS YP_004336259.1 331700020 10368163 6672122..6672619 1 NC_015312.1 KEGG: hau:Haur_1072 activator of HSP90 ATPase 1 family protein; manually curated; PFAM: Activator of Hsp90 ATPase homologue 1-like; Activator of Hsp90 ATPase 1 family protein 6672619 10368163 Psed_6308 Pseudonocardia dioxanivorans CB1190 Activator of Hsp90 ATPase 1 family protein YP_004336259.1 6672122 D 675635 CDS YP_004336260.1 331700021 10368164 complement(6672632..6673543) 1 NC_015312.1 KEGG: gob:Gobs_2516 hypothetical protein; hypothetical protein 6673543 10368164 Psed_6309 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336260.1 6672632 R 675635 CDS YP_004336261.1 331700022 10368165 6673719..6674309 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: sro:Sros_0098 transcriptional regulator, PadR family; PadR family transcriptional regulator 6674309 10368165 Psed_6310 Pseudonocardia dioxanivorans CB1190 PadR family transcriptional regulator YP_004336261.1 6673719 D 675635 CDS YP_004336262.1 331700023 10368166 6674450..6674890 1 NC_015312.1 KEGG: sna:Snas_4756 hypothetical protein; hypothetical protein 6674890 10368166 Psed_6311 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336262.1 6674450 D 675635 CDS YP_004336263.1 331700024 10368167 complement(6675177..6675614) 1 NC_015312.1 hypothetical protein 6675614 10368167 Psed_6312 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336263.1 6675177 R 675635 CDS YP_004336264.1 331700025 10368168 complement(6675664..6676707) 1 NC_015312.1 PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: ach:Achl_0672 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 6676707 10368168 Psed_6313 Pseudonocardia dioxanivorans CB1190 2OG-Fe(II) oxygenase YP_004336264.1 6675664 R 675635 CDS YP_004336265.1 331700026 10368169 complement(6676753..6677631) 1 NC_015312.1 hypothetical protein 6677631 10368169 Psed_6314 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336265.1 6676753 R 675635 CDS YP_004336266.1 331700027 10368170 complement(6677800..6678279) 1 NC_015312.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: afw:Anae109_2054 OsmC family protein; OsmC family protein 6678279 10368170 Psed_6315 Pseudonocardia dioxanivorans CB1190 OsmC family protein YP_004336266.1 6677800 R 675635 CDS YP_004336267.1 331700028 10368171 complement(6678398..6679465) 1 NC_015312.1 KEGG: nml:Namu_2396 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Alpha/beta hydrolase fold-1; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6679465 10368171 Psed_6316 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336267.1 6678398 R 675635 CDS YP_004336268.1 331700029 10368172 6679540..6681099 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: mlo:mlr9221 hypothetical protein; amidohydrolase 6681099 10368172 Psed_6317 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004336268.1 6679540 D 675635 CDS YP_004336269.1 331700030 10368173 6681096..6682196 1 NC_015312.1 PFAM: Amidohydrolase 2; KEGG: mlo:mlr9222 hypothetical protein; amidohydrolase 6682196 10368173 Psed_6318 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004336269.1 6681096 D 675635 CDS YP_004336270.1 331700031 10368174 6682193..6682630 1 NC_015312.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll7609 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 6682630 10368174 Psed_6319 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) domain-containing protein YP_004336270.1 6682193 D 675635 CDS YP_004336271.1 331700032 10368175 6682642..6683106 1 NC_015312.1 manually curated; PFAM: HTH transcriptional regulator, AraC; KEGG: tpr:Tpau_2986 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6683106 10368175 Psed_6320 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004336271.1 6682642 D 675635 CDS YP_004336272.1 331700033 10368176 6683117..6683545 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro02414 lyase; glyoxalase/bleomycin resistance protein/dioxygenase 6683545 10368176 Psed_6321 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336272.1 6683117 D 675635 CDS YP_004336273.1 331700034 10368177 6683716..6684234 1 NC_015312.1 PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: mav:MAV_5159 methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 6684234 10368177 Psed_6322 Pseudonocardia dioxanivorans CB1190 peptide methionine sulfoxide reductase YP_004336273.1 6683716 D 675635 CDS YP_004336274.1 331700035 10368178 complement(6684289..6685380) 1 NC_015312.1 KEGG: rha:RHA1_ro05161 hypothetical protein; hypothetical protein 6685380 10368178 Psed_6323 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336274.1 6684289 R 675635 CDS YP_004336275.1 331700036 10368179 complement(6685469..6686155) 1 NC_015312.1 KEGG: nml:Namu_0818 hypothetical protein; hypothetical protein 6686155 10368179 Psed_6324 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336275.1 6685469 R 675635 CDS YP_004336276.1 331700037 10368180 6686212..6689301 1 NC_015312.1 KEGG: nca:Noca_4962 transcriptional activator domain-containing protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 6689301 10368180 Psed_6325 Pseudonocardia dioxanivorans CB1190 winged helix family transcriptional regulator YP_004336276.1 6686212 D 675635 CDS YP_004336277.1 331700038 10368181 6689373..6690107 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI_2727 hypothetical protein; short-chain dehydrogenase/reductase SDR 6690107 10368181 Psed_6326 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004336277.1 6689373 D 675635 CDS YP_004336278.1 331700039 10368182 complement(6690139..6691038) 1 NC_015312.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: amd:AMED_4619 LysR family transcriptional regulator; LysR family transcriptional regulator 6691038 10368182 Psed_6327 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004336278.1 6690139 R 675635 CDS YP_004336279.1 331700040 10368183 complement(6691094..6692257) 1 NC_015312.1 KEGG: mrd:Mrad2831_3061 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; malate dehydrogenase 6692257 10368183 Psed_6328 Pseudonocardia dioxanivorans CB1190 malate dehydrogenase YP_004336279.1 6691094 R 675635 CDS YP_004336280.1 331700041 10368184 6692377..6693774 1 NC_015312.1 KEGG: fri:FraEuI1c_2507 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain; SMART: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain; histidine kinase 6693774 10368184 Psed_6329 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004336280.1 6692377 D 675635 CDS YP_004336281.1 331700042 10368185 6694345..6696495 1 NC_015312.1 KEGG: gob:Gobs_2550 helicase domain-containing protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; helicase 6696495 10368185 Psed_6330 Pseudonocardia dioxanivorans CB1190 helicase YP_004336281.1 6694345 D 675635 CDS YP_004336282.1 331700043 10368186 complement(6696521..6697816) 1 NC_015312.1 PFAM: Short-chain dehydrogenase/reductase SDR; Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; KEGG: mes:Meso_2493 short-chain dehydrogenase/reductase SDR; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6697816 10368186 Psed_6331 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336282.1 6696521 R 675635 CDS YP_004336283.1 331700044 10368187 complement(6698386..6699255) 1 NC_015312.1 KEGG: cai:Caci_4599 luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 6699255 10368187 Psed_6332 Pseudonocardia dioxanivorans CB1190 F420-dependent oxidoreductase YP_004336283.1 6698386 R 675635 CDS YP_004336284.1 331700045 10368188 6699397..6700296 1 NC_015312.1 PFAM: Crotonase, core; KEGG: cwo:Cwoe_2706 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 6700296 10368188 Psed_6333 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004336284.1 6699397 D 675635 CDS YP_004336285.1 331700046 10368189 6700293..6700931 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0501 transcriptional regulator, TetR family; TetR family transcriptional regulator 6700931 10368189 Psed_6334 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336285.1 6700293 D 675635 CDS YP_004336286.1 331700047 10368190 complement(6700964..6701992) 1 NC_015312.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: msm:MSMEG_5845 C4-dicarboxylate transporter; C4-dicarboxylate transporter/malic acid transport protein 6701992 10368190 Psed_6335 Pseudonocardia dioxanivorans CB1190 C4-dicarboxylate transporter/malic acid transport protein YP_004336286.1 6700964 R 675635 CDS YP_004336287.1 331700048 10368191 complement(6702161..6704476) 1 NC_015312.1 KEGG: nfa:nfa21950 hydantoinase; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 6704476 10368191 Psed_6336 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004336287.1 6702161 R 675635 CDS YP_004336288.1 331700049 10368192 complement(6704478..6706598) 1 NC_015312.1 KEGG: rha:RHA1_ro00479 hydantoin utilization protein A; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 6706598 10368192 Psed_6337 Pseudonocardia dioxanivorans CB1190 5-oxoprolinase YP_004336288.1 6704478 R 675635 CDS YP_004336289.1 331700050 10368193 6706767..6708302 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: nfa:nfa21970 oxidoreductase; monooxygenase FAD-binding protein 6708302 10368193 Psed_6338 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004336289.1 6706767 D 675635 CDS YP_004336290.1 331700051 10368194 6708299..6709945 1 NC_015312.1 KEGG: nfa:nfa21960 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; (2,3-dihydroxybenzoyl)adenylate synthase 6709945 10368194 Psed_6339 Pseudonocardia dioxanivorans CB1190 (2,3-dihydroxybenzoyl)adenylate synthase YP_004336290.1 6708299 D 675635 CDS YP_004336291.1 331700052 10368195 6709942..6710664 1 NC_015312.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: rop:ROP_34370 maleate cis-trans isomerase; Asp/Glu/hydantoin racemase 6710664 10368195 Psed_6340 Pseudonocardia dioxanivorans CB1190 Asp/Glu/hydantoin racemase YP_004336291.1 6709942 D 675635 CDS YP_004336292.1 331700053 10368196 6710714..6711358 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rop:ROP_34380 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 6711358 10368196 Psed_6341 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336292.1 6710714 D 675635 CDS YP_004336293.1 331700054 10368197 6711325..6711603 1 NC_015312.1 KEGG: rop:ROP_34390 hypothetical protein; hypothetical protein 6711603 10368197 Psed_6342 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336293.1 6711325 D 675635 CDS YP_004336294.1 331700055 10368198 6711600..6712877 1 NC_015312.1 KEGG: nfa:nfa21900 hypothetical protein; hypothetical protein 6712877 10368198 Psed_6343 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336294.1 6711600 D 675635 CDS YP_004336295.1 331700056 10368199 complement(6712953..6714263) 1 NC_015312.1 PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit 6714263 10368199 Psed_6344 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336295.1 6712953 R 675635 CDS YP_004336296.1 331700057 10368200 complement(6714369..6715568) 1 NC_015312.1 PFAM: Homogentisate 1,2-dioxygenase; KEGG: sen:SACE_3944 homogentisate 1,2-dioxygenase; homogentisate 12-dioxygenase 6715568 10368200 Psed_6345 Pseudonocardia dioxanivorans CB1190 homogentisate 12-dioxygenase YP_004336296.1 6714369 R 675635 CDS YP_004336297.1 331700058 10368201 6715742..6716422 1 NC_015312.1 KEGG: rer:RER_57680 hypothetical protein; hypothetical protein 6716422 10368201 Psed_6346 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336297.1 6715742 D 675635 CDS YP_004336298.1 331700059 10368202 6716721..6717158 1 NC_015312.1 PFAM: Heat shock protein Hsp20; KEGG: amd:AMED_3057 heat shock protein; heat shock protein Hsp20 6717158 10368202 Psed_6347 Pseudonocardia dioxanivorans CB1190 heat shock protein Hsp20 YP_004336298.1 6716721 D 675635 CDS YP_004336299.1 331700060 10368203 6717167..6717988 1 NC_015312.1 KEGG: cfa:608199 hypothetical protein LOC608199; hypothetical protein 6717988 10368203 Psed_6348 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336299.1 6717167 D 675635 CDS YP_004336300.1 331700061 10368204 complement(6717973..6718620) 1 NC_015312.1 KEGG: gob:Gobs_2541 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 6718620 10368204 Psed_6349 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336300.1 6717973 R 675635 CDS YP_004336301.1 331700062 10368205 complement(6718608..6719492) 1 NC_015312.1 KEGG: gob:Gobs_2540 signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 6719492 10368205 Psed_6350 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004336301.1 6718608 R 675635 CDS YP_004336302.1 331700063 10368206 6719659..6720468 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: gob:Gobs_1406 hypothetical protein; transposase IS4 family protein 6720468 10368206 Psed_6351 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004336302.1 6719659 D 675635 CDS YP_004336303.1 331700064 10368207 complement(6720516..6721109) 1 NC_015312.1 PFAM: Plasmid pRiA4b ORF-3-like; KEGG: mil:ML5_1921 plasmid pria4b orf-3 family protein; plasmid pRiA4b ORF-3 family protein 6721109 10368207 Psed_6352 Pseudonocardia dioxanivorans CB1190 plasmid pRiA4b ORF-3 family protein YP_004336303.1 6720516 R 675635 CDS YP_004336304.1 331700065 10368208 6721226..6722455 1 NC_015312.1 KEGG: gob:Gobs_3530 transposase; transposase 6722455 10368208 Psed_6353 Pseudonocardia dioxanivorans CB1190 transposase YP_004336304.1 6721226 D 675635 CDS YP_004336305.1 331700066 10368209 complement(6722706..6723749) 1 NC_015312.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 6723749 10368209 Psed_6354 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004336305.1 6722706 R 675635 CDS YP_004336306.1 331700067 10368212 complement(6724595..6725413) 1 NC_015312.1 KEGG: tbi:Tbis_3219 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; hydrogenase nickel incorporation protein HypB 6725413 10368212 Psed_6357 Pseudonocardia dioxanivorans CB1190 hydrogenase nickel incorporation protein HypB YP_004336306.1 6724595 R 675635 CDS YP_004336307.1 331700068 10368213 complement(6725420..6725758) 1 NC_015312.1 PFAM: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: tbi:Tbis_3220 hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA 6725758 10368213 Psed_6358 Pseudonocardia dioxanivorans CB1190 hydrogenase nickel incorporation protein HypA YP_004336307.1 6725420 R 675635 CDS YP_004336308.1 331700069 10368214 complement(6725802..6726860) 1 NC_015312.1 KEGG: tbi:Tbis_3221 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6726860 10368214 Psed_6359 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004336308.1 6725802 R 675635 CDS YP_004336309.1 331700070 10368215 6727073..6727600 1 NC_015312.1 PFAM: Protein of unknown function DUF1641; KEGG: tbi:Tbis_3222 hypothetical protein; hypothetical protein 6727600 10368215 Psed_6360 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336309.1 6727073 D 675635 CDS YP_004336310.1 331700071 10368216 6727735..6728706 1 NC_015312.1 KEGG: tbi:Tbis_3223 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; cytochrome-c3 hydrogenase 6728706 10368216 Psed_6361 Pseudonocardia dioxanivorans CB1190 cytochrome-c3 hydrogenase YP_004336310.1 6727735 D 675635 CDS YP_004336311.1 331700072 10368217 6728776..6730383 1 NC_015312.1 KEGG: tbi:Tbis_3224 cytochrome-c3 hydrogenase; PFAM: Nickel-dependent hydrogenase, large subunit; cytochrome-c3 hydrogenase 6730383 10368217 Psed_6362 Pseudonocardia dioxanivorans CB1190 cytochrome-c3 hydrogenase YP_004336311.1 6728776 D 675635 CDS YP_004336312.1 331700073 10368218 6730380..6731219 1 NC_015312.1 KEGG: mva:Mvan_2367 hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein; hydrogenase maturation protease 6731219 10368218 Psed_6363 Pseudonocardia dioxanivorans CB1190 hydrogenase maturation protease YP_004336312.1 6730380 D 675635 CDS YP_004336313.1 331700074 10368219 6731216..6731545 1 NC_015312.1 KEGG: msm:MSMEG_2266 hypothetical protein; hypothetical protein 6731545 10368219 Psed_6364 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336313.1 6731216 D 675635 CDS YP_004336314.1 331700075 10368220 6731556..6732815 1 NC_015312.1 KEGG: msm:MSMEG_2267 TPR repeat-containing protein; hypothetical protein 6732815 10368220 Psed_6365 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336314.1 6731556 D 675635 CDS YP_004336315.1 331700076 10368221 6732819..6733172 1 NC_015312.1 KEGG: chl:Chy400_2991 hypothetical protein; hypothetical protein 6733172 10368221 Psed_6366 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336315.1 6732819 D 675635 CDS YP_004336316.1 331700077 10368222 6733183..6734103 1 NC_015312.1 PFAM: NIF system FeS cluster assembly, NifU, C-terminal; Rieske [2Fe-2S] iron-sulphur domain; KEGG: msm:MSMEG_2268 hypothetical protein; nitrogen-fixing NifU domain-containing protein 6734103 10368222 Psed_6367 Pseudonocardia dioxanivorans CB1190 nitrogen-fixing NifU domain-containing protein YP_004336316.1 6733183 D 675635 CDS YP_004336317.1 331700078 10368223 6734100..6735302 1 NC_015312.1 PFAM: NHL repeat; KEGG: mva:Mvan_2370 NHL repeat-containing protein; NHL repeat containing protein 6735302 10368223 Psed_6368 Pseudonocardia dioxanivorans CB1190 NHL repeat containing protein YP_004336317.1 6734100 D 675635 CDS YP_004336318.1 331700079 10368224 6735299..6737638 1 NC_015312.1 KEGG: tbi:Tbis_3230 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Carbamoyltransferase, HypF-type; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type; (NiFe) hydrogenase maturation protein HypF 6737638 10368224 Psed_6369 Pseudonocardia dioxanivorans CB1190 (NiFe) hydrogenase maturation protein HypF YP_004336318.1 6735299 D 675635 CDS YP_004336319.1 331700080 10368225 6737640..6737900 1 NC_015312.1 KEGG: tbi:Tbis_3231 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone HypC/HupF 6737900 10368225 Psed_6370 Pseudonocardia dioxanivorans CB1190 hydrogenase assembly chaperone HypC/HupF YP_004336319.1 6737640 D 675635 CDS YP_004336320.1 331700081 10368226 6737897..6738622 1 NC_015312.1 PFAM: Hydrogenase expression/formation protein, HupF/HypC; KEGG: tbi:Tbis_3232 hypothetical protein; hydrogenase expression/formation protein HupF/HypC 6738622 10368226 Psed_6371 Pseudonocardia dioxanivorans CB1190 hydrogenase expression/formation protein HupF/HypC YP_004336320.1 6737897 D 675635 CDS YP_004336321.1 331700082 10368227 6738622..6739296 1 NC_015312.1 KEGG: mmi:MMAR_1860 sugar phosphate isomerase; sugar phosphate isomerase 6739296 10368227 Psed_6372 Pseudonocardia dioxanivorans CB1190 sugar phosphate isomerase YP_004336321.1 6738622 D 675635 CDS YP_004336322.1 331700083 10368228 6739293..6740402 1 NC_015312.1 KEGG: mmi:MMAR_1859 hydrogenase maturation factor, HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; hydrogenase expression/formation protein HypE 6740402 10368228 Psed_6373 Pseudonocardia dioxanivorans CB1190 hydrogenase expression/formation protein HypE YP_004336322.1 6739293 D 675635 CDS YP_004336323.1 331700084 10368229 6740414..6740686 1 NC_015312.1 KEGG: mmi:MMAR_1858 hydrogenase maturation factor, HypC; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone HypC/HupF 6740686 10368229 Psed_6374 Pseudonocardia dioxanivorans CB1190 hydrogenase assembly chaperone HypC/HupF YP_004336323.1 6740414 D 675635 CDS YP_004336324.1 331700085 10368230 6740724..6741854 1 NC_015312.1 KEGG: tbi:Tbis_3236 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 6741854 10368230 Psed_6375 Pseudonocardia dioxanivorans CB1190 hydrogenase expression/formation protein HypD YP_004336324.1 6740724 D 675635 CDS YP_004336325.1 331700086 10368231 6741851..6742597 1 NC_015312.1 KEGG: tbi:Tbis_3237 hypothetical protein; hypothetical protein 6742597 10368231 Psed_6376 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336325.1 6741851 D 675635 CDS YP_004336326.1 331700087 10368232 6742597..6743460 1 NC_015312.1 KEGG: msm:MSMEG_2270 hypothetical protein; hypothetical protein 6743460 10368232 Psed_6377 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336326.1 6742597 D 675635 CDS YP_004336327.1 331700088 10368233 6743876..6743989 1 NC_015312.1 hypothetical protein 6743989 10368233 Psed_6378 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336327.1 6743876 D 675635 CDS YP_004336328.1 331700089 10368234 complement(6744365..6745225) 1 NC_015312.1 KEGG: rha:RHA1_ro11310 hydroxyquinol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase 6745225 10368234 Psed_6379 Pseudonocardia dioxanivorans CB1190 hydroxyquinol 1,2-dioxygenase YP_004336328.1 6744365 R 675635 CDS YP_004336329.1 331700090 10368235 complement(6745238..6745537) 1 NC_015312.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rha:RHA1_ro11311 hypothetical protein; antibiotic biosynthesis monooxygenase 6745537 10368235 Psed_6380 Pseudonocardia dioxanivorans CB1190 antibiotic biosynthesis monooxygenase YP_004336329.1 6745238 R 675635 CDS YP_004336330.1 331700091 10368236 6745752..6746561 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: gob:Gobs_1406 hypothetical protein; transposase IS4 family protein 6746561 10368236 Psed_6381 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004336330.1 6745752 D 675635 CDS YP_004336331.1 331700092 10368237 complement(6746609..6747202) 1 NC_015312.1 PFAM: Plasmid pRiA4b ORF-3-like; KEGG: mil:ML5_1921 plasmid pria4b orf-3 family protein; plasmid pRiA4b ORF-3 family protein 6747202 10368237 Psed_6382 Pseudonocardia dioxanivorans CB1190 plasmid pRiA4b ORF-3 family protein YP_004336331.1 6746609 R 675635 CDS YP_004336332.1 331700093 10368238 6747325..6748218 1 NC_015312.1 PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 6748218 10368238 Psed_6383 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004336332.1 6747325 D 675635 CDS YP_004336333.1 331700094 10368239 complement(6748231..6749070) 1 NC_015312.1 KEGG: gob:Gobs_2540 signal transduction histidine kinase; signal transduction histidine kinase 6749070 10368239 Psed_6384 Pseudonocardia dioxanivorans CB1190 signal transduction histidine kinase YP_004336333.1 6748231 R 675635 CDS YP_004336334.1 331700095 10368240 6749268..6750554 1 NC_015312.1 PFAM: Peptidase M23; KEGG: xau:Xaut_4198 peptidase M23B; peptidase M23 6750554 10368240 Psed_6385 Pseudonocardia dioxanivorans CB1190 peptidase M23 YP_004336334.1 6749268 D 675635 CDS YP_004336335.1 331700096 10368241 complement(6750840..6753719) 1 NC_015312.1 hypothetical protein 6753719 10368241 Psed_6386 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336335.1 6750840 R 675635 CDS YP_004336336.1 331700097 10368242 6753908..6754255 1 NC_015312.1 hypothetical protein 6754255 10368242 Psed_6387 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336336.1 6753908 D 675635 CDS YP_004336337.1 331700098 10368243 6754252..6754446 1 NC_015312.1 hypothetical protein 6754446 10368243 Psed_6388 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336337.1 6754252 D 675635 CDS YP_004336338.1 331700099 10368244 6754509..6754844 1 NC_015312.1 KEGG: fri:FraEuI1c_4593 transcriptional regulator, SARP family; SARP family transcriptional regulator 6754844 10368244 Psed_6389 Pseudonocardia dioxanivorans CB1190 SARP family transcriptional regulator YP_004336338.1 6754509 D 675635 CDS YP_004336339.1 331700100 10368245 6755032..6756402 1 NC_015312.1 hypothetical protein 6756402 10368245 Psed_6390 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336339.1 6755032 D 675635 CDS YP_004336340.1 331700101 10368246 6756600..6756767 1 NC_015312.1 hypothetical protein 6756767 10368246 Psed_6391 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336340.1 6756600 D 675635 CDS YP_004336341.1 331700102 10368247 6756903..6757802 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: nml:Namu_0557 alpha/beta hydrolase fold protein; alpha/beta hydrolase 6757802 10368247 Psed_6392 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004336341.1 6756903 D 675635 CDS YP_004336342.1 331700103 10368248 complement(6757807..6758424) 1 NC_015312.1 hypothetical protein 6758424 10368248 Psed_6393 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336342.1 6757807 R 675635 CDS YP_004336343.1 331700104 10368249 complement(6758421..6759662) 1 NC_015312.1 KEGG: nml:Namu_5075 hypothetical protein; hypothetical protein 6759662 10368249 Psed_6394 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336343.1 6758421 R 675635 CDS YP_004336344.1 331700105 10368251 complement(6760301..6761074) 1 NC_015312.1 PFAM: Amidase; KEGG: rhi:NGR_b05700 indoleacetamide hydrolase; amidase 6761074 10368251 Psed_6396 Pseudonocardia dioxanivorans CB1190 amidase YP_004336344.1 6760301 R 675635 CDS YP_004336345.1 331700106 10368252 6761201..6761824 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_2153 transcriptional regulator, TetR family protein; TetR family transcriptional regulator 6761824 10368252 Psed_6397 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336345.1 6761201 D 675635 CDS YP_004336346.1 331700107 10368253 complement(6761841..6762431) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: art:Arth_0865 TetR family transcriptional regulator; TetR family transcriptional regulator 6762431 10368253 Psed_6398 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336346.1 6761841 R 675635 CDS YP_004336347.1 331700108 10368254 complement(6762546..6763295) 1 NC_015312.1 KEGG: cai:Caci_7157 hypothetical protein; hypothetical protein 6763295 10368254 Psed_6399 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336347.1 6762546 R 675635 CDS YP_004336348.1 331700109 10368255 complement(6763321..6764184) 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: kfl:Kfla_0628 ABC transporter related protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 6764184 10368255 Psed_6400 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004336348.1 6763321 R 675635 CDS YP_004336349.1 331700110 10368256 complement(6764181..6767300) 1 NC_015312.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: gob:Gobs_3888 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 6767300 10368256 Psed_6401 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004336349.1 6764181 R 675635 CDS YP_004336350.1 331700111 10368257 complement(6767297..6768340) 1 NC_015312.1 PFAM: FAD dependent oxidoreductase; KEGG: gob:Gobs_3895 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase 6768340 10368257 Psed_6402 Pseudonocardia dioxanivorans CB1190 FAD dependent oxidoreductase YP_004336350.1 6767297 R 675635 CDS YP_004336351.1 331700112 10368258 complement(6768337..6768546) 1 NC_015312.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mil:ML5_0770 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 6768546 10368258 Psed_6403 Pseudonocardia dioxanivorans CB1190 heavy metal transport/detoxification protein YP_004336351.1 6768337 R 675635 CDS YP_004336352.1 331700113 10368259 6768630..6771302 1 NC_015312.1 KEGG: gob:Gobs_3893 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6771302 10368259 Psed_6404 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336352.1 6768630 D 675635 CDS YP_004336353.1 331700114 10368261 complement(6773945..6774496) 1 NC_015312.1 KEGG: fri:FraEuI1c_1573 hypothetical protein; hypothetical protein 6774496 10368261 Psed_6406 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336353.1 6773945 R 675635 CDS YP_004336354.1 331700115 10368262 complement(6774527..6775138) 1 NC_015312.1 KEGG: req:REQ_03350 sam dependent methyltransferase; hypothetical protein 6775138 10368262 Psed_6407 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336354.1 6774527 R 675635 CDS YP_004336355.1 331700116 10368263 6775475..6775750 1 NC_015312.1 KEGG: mva:Mvan_1930 hypothetical protein; hypothetical protein 6775750 10368263 Psed_6408 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336355.1 6775475 D 675635 CDS YP_004336356.1 331700117 10368264 complement(6775831..6776781) 1 NC_015312.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sro:Sros_4758 hypothetical protein; hypothetical protein 6776781 10368264 Psed_6409 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336356.1 6775831 R 675635 CDS YP_004336357.1 331700118 10368265 complement(6776778..6777437) 1 NC_015312.1 PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: cwo:Cwoe_1418 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 6777437 10368265 Psed_6410 Pseudonocardia dioxanivorans CB1190 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_004336357.1 6776778 R 675635 CDS YP_004336358.1 331700119 10368266 6777527..6778258 1 NC_015312.1 KEGG: sgr:SGR_274 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6778258 10368266 Psed_6411 Pseudonocardia dioxanivorans CB1190 winged helix family two component transcriptional regulator YP_004336358.1 6777527 D 675635 CDS YP_004336359.1 331700120 10368267 6778270..6779364 1 NC_015312.1 KEGG: cwo:Cwoe_1411 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 6779364 10368267 Psed_6412 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004336359.1 6778270 D 675635 CDS YP_004336360.1 331700121 10368268 complement(6779471..6780034) 1 NC_015312.1 PFAM: Uncharacterised protein family YphA; KEGG: rha:RHA1_ro10353 hypothetical protein; DoxX family protein 6780034 10368268 Psed_6413 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004336360.1 6779471 R 675635 CDS YP_004336361.1 331700122 10368269 complement(6780221..6781513) 1 NC_015312.1 PFAM: Chloride channel, voltage gated; KEGG: amr:AM1_2979 Cl-channel, voltage gated; Cl- channel voltage-gated family protein 6781513 10368269 Psed_6414 Pseudonocardia dioxanivorans CB1190 Cl- channel voltage-gated family protein YP_004336361.1 6780221 R 675635 CDS YP_004336362.1 331700123 10368270 6781767..6783200 1 NC_015312.1 PFAM: Cytochrome d ubiquinol oxidase, subunit I; KEGG: sro:Sros_7914 cytochrome d ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 6783200 10368270 Psed_6415 Pseudonocardia dioxanivorans CB1190 cytochrome bd ubiquinol oxidase subunit I YP_004336362.1 6781767 D 675635 CDS YP_004336363.1 331700124 10368271 6783197..6784273 1 NC_015312.1 PFAM: Cytochrome d ubiquinol oxidase, subunit II; KEGG: sro:Sros_7913 terminal oxidase subunit II; cytochrome bd ubiquinol oxidase subunit II 6784273 10368271 Psed_6416 Pseudonocardia dioxanivorans CB1190 cytochrome bd ubiquinol oxidase subunit II YP_004336363.1 6783197 D 675635 CDS YP_004336364.1 331700125 10368272 6784290..6786152 1 NC_015312.1 PFAM: Glycoside hydrolase 15-related; KEGG: cwo:Cwoe_0874 glycoside hydrolase 15-related protein; glycoside hydrolase 15-like protein 6786152 10368272 Psed_6417 Pseudonocardia dioxanivorans CB1190 glycoside hydrolase 15-like protein YP_004336364.1 6784290 D 675635 CDS YP_004336365.1 331700126 10368273 6786149..6787501 1 NC_015312.1 KEGG: nml:Namu_1841 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase 6787501 10368273 Psed_6418 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase YP_004336365.1 6786149 D 675635 CDS YP_004336366.1 331700127 10368275 6787789..6789177 1 NC_015312.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: npu:Npun_F3304 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 6789177 10368275 Psed_6420 Pseudonocardia dioxanivorans CB1190 glucose-6-phosphate 1-dehydrogenase YP_004336366.1 6787789 D 675635 CDS YP_004336367.1 331700128 10368276 complement(6789253..6789708) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fri:FraEuI1c_3368 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6789708 10368276 Psed_6421 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336367.1 6789253 R 675635 CDS YP_004336368.1 331700129 10368277 complement(6789798..6790484) 1 NC_015312.1 PFAM: Methyltransferase type 12; KEGG: rxy:Rxyl_0824 type 12 methyltransferase; type 12 methyltransferase 6790484 10368277 Psed_6422 Pseudonocardia dioxanivorans CB1190 type 12 methyltransferase YP_004336368.1 6789798 R 675635 CDS YP_004336369.1 331700130 10368279 6791049..6791252 1 NC_015312.1 KEGG: fre:Franean1_0560 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 6791252 10368279 Psed_6424 Pseudonocardia dioxanivorans CB1190 cold-shock DNA-binding domain-containing protein YP_004336369.1 6791049 D 675635 CDS YP_004336370.1 331700131 10368280 complement(6791439..6791870) 1 NC_015312.1 hypothetical protein 6791870 10368280 Psed_6425 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336370.1 6791439 R 675635 CDS YP_004336371.1 331700132 10368281 6791990..6793999 1 NC_015312.1 PFAM: Copper amine oxidase, C-terminal; Copper amine oxidase, N3-terminal; Copper amine oxidase, N2-terminal; KEGG: fre:Franean1_7247 tyramine oxidase; Copper amine oxidase domain-containing protein 6793999 10368281 Psed_6426 Pseudonocardia dioxanivorans CB1190 Copper amine oxidase domain-containing protein YP_004336371.1 6791990 D 675635 CDS YP_004336372.1 331700133 10368282 6793996..6795498 1 NC_015312.1 PFAM: Amino acid permease domain; KEGG: msm:MSMEG_1137 amino acid permease-associated region; amino acid permease 6795498 10368282 Psed_6427 Pseudonocardia dioxanivorans CB1190 amino acid permease YP_004336372.1 6793996 D 675635 CDS YP_004336373.1 331700134 10368284 6796601..6797155 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ank:AnaeK_1572 regulatory protein TetR; TetR family transcriptional regulator 6797155 10368284 Psed_6429 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336373.1 6796601 D 675635 CDS YP_004336374.1 331700135 10368285 6797295..6800372 1 NC_015312.1 KEGG: lch:Lcho_4113 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; multi-sensor hybrid histidine kinase 6800372 10368285 Psed_6430 Pseudonocardia dioxanivorans CB1190 multi-sensor hybrid histidine kinase YP_004336374.1 6797295 D 675635 CDS YP_004336375.1 331700136 10368286 6800369..6801091 1 NC_015312.1 KEGG: cyn:Cyan7425_0749 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; sensor with HAMP domain-containing protein 6801091 10368286 Psed_6431 Pseudonocardia dioxanivorans CB1190 sensor with HAMP domain-containing protein YP_004336375.1 6800369 D 675635 CDS YP_004336376.1 331700137 10368287 6801088..6801840 1 NC_015312.1 KEGG: hau:Haur_1254 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 6801840 10368287 Psed_6432 Pseudonocardia dioxanivorans CB1190 cobyrinic acid ac-diamide synthase YP_004336376.1 6801088 D 675635 CDS YP_004336377.1 331700138 10368288 6801842..6803746 1 NC_015312.1 PFAM: Patatin/Phospholipase A2-related; Cyclic nucleotide-binding domain; KEGG: dal:Dalk_2094 cyclic nucleotide-binding protein; SMART: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 6803746 10368288 Psed_6433 Pseudonocardia dioxanivorans CB1190 cyclic nucleotide-binding protein YP_004336377.1 6801842 D 675635 CDS YP_004336378.1 331700139 10368289 complement(6803781..6804449) 1 NC_015312.1 KEGG: kva:Kvar_3050 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver 6804449 10368289 Psed_6434 Pseudonocardia dioxanivorans CB1190 response regulator receiver YP_004336378.1 6803781 R 675635 CDS YP_004336379.1 331700140 10368290 complement(6804815..6806215) 1 NC_015312.1 KEGG: amd:AMED_2409 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; (R)-6-hydroxynicotine oxidase 6806215 10368290 Psed_6435 Pseudonocardia dioxanivorans CB1190 (R)-6-hydroxynicotine oxidase YP_004336379.1 6804815 R 675635 CDS YP_004336380.1 331700141 10368291 complement(6806282..6809242) 1 NC_015312.1 PFAM: Bacterial transcriptional activator domain; KEGG: pol:Bpro_1406 transcriptional activator domain-containing protein; transcriptional activator domain-containing protein 6809242 10368291 Psed_6436 Pseudonocardia dioxanivorans CB1190 transcriptional activator domain-containing protein YP_004336380.1 6806282 R 675635 CDS YP_004336381.1 331700142 10368292 complement(6809408..6810517) 1 NC_015312.1 KEGG: nml:Namu_0956 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6810517 10368292 Psed_6437 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336381.1 6809408 R 675635 CDS YP_004336382.1 331700143 10368293 6810538..6811377 1 NC_015312.1 PFAM: Haemerythrin/HHE cation-binding motif; KEGG: nml:Namu_0955 hemerythrin HHE cation binding domain-containing protein; hemerythrin HHE cation binding domain-containing protein 6811377 10368293 Psed_6438 Pseudonocardia dioxanivorans CB1190 hemerythrin HHE cation binding domain-containing protein YP_004336382.1 6810538 D 675635 CDS YP_004336383.1 331700144 10368294 6811457..6812524 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: msm:MSMEG_1587 alpha/beta hydrolase fold; alpha/beta hydrolase 6812524 10368294 Psed_6439 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004336383.1 6811457 D 675635 CDS YP_004336384.1 331700145 10368295 6812910..6814049 1 NC_015312.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: nar:Saro_2409 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 6814049 10368295 Psed_6440 Pseudonocardia dioxanivorans CB1190 vitamin-B12 independent methionine synthase YP_004336384.1 6812910 D 675635 CDS YP_004336385.1 331700146 10368296 complement(6814278..6815480) 1 NC_015312.1 PFAM: Beta-lactamase-related; KEGG: dsh:Dshi_2284 hypothetical protein; beta-lactamase 6815480 10368296 Psed_6441 Pseudonocardia dioxanivorans CB1190 beta-lactamase YP_004336385.1 6814278 R 675635 CDS YP_004336386.1 331700147 10368297 complement(6815783..6816799) 1 NC_015312.1 KEGG: nml:Namu_1675 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 6816799 10368297 Psed_6442 Pseudonocardia dioxanivorans CB1190 aminoglycoside phosphotransferase YP_004336386.1 6815783 R 675635 CDS YP_004336387.1 331700148 10368298 complement(6817130..6818467) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rop:ROP_17540 MFS transporter; major facilitator superfamily protein 6818467 10368298 Psed_6443 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004336387.1 6817130 R 675635 CDS YP_004336388.1 331700149 10368299 complement(6818460..6818552) 1 NC_015312.1 hypothetical protein 6818552 10368299 Psed_6444 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336388.1 6818460 R 675635 CDS YP_004336389.1 331700150 10368300 complement(6818540..6819733) 1 NC_015312.1 PFAM: Cytochrome P450; KEGG: swi:Swit_1021 cytochrome P450; cytochrome P450 6819733 10368300 Psed_6445 Pseudonocardia dioxanivorans CB1190 cytochrome P450 YP_004336389.1 6818540 R 675635 CDS YP_004336390.1 331700151 10368301 complement(6819852..6820703) 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fri:FraEuI1c_5691 hypothetical protein; alpha/beta hydrolase 6820703 10368301 Psed_6446 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004336390.1 6819852 R 675635 CDS YP_004336391.1 331700152 10368302 complement(6820799..6821809) 1 NC_015312.1 KEGG: nfa:nfa12460 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6821809 10368302 Psed_6447 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004336391.1 6820799 R 675635 CDS YP_004336392.1 331700153 10368303 complement(6821861..6823522) 1 NC_015312.1 KEGG: nfa:nfa21960 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; (2,3-dihydroxybenzoyl)adenylate synthase 6823522 10368303 Psed_6448 Pseudonocardia dioxanivorans CB1190 (2,3-dihydroxybenzoyl)adenylate synthase YP_004336392.1 6821861 R 675635 CDS YP_004336393.1 331700154 10368304 complement(6823546..6824688) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: reu:Reut_B5482 monooxygenase, FAD-binding; monooxygenase FAD-binding protein 6824688 10368304 Psed_6449 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004336393.1 6823546 R 675635 CDS YP_004336394.1 331700155 10368305 complement(6824667..6825239) 1 NC_015312.1 PFAM: Flavodoxin/nitric oxide synthase; KEGG: mag:amb4017 multimeric flavodoxin WrbA; flavodoxin/nitric oxide synthase 6825239 10368305 Psed_6450 Pseudonocardia dioxanivorans CB1190 flavodoxin/nitric oxide synthase YP_004336394.1 6824667 R 675635 CDS YP_004336395.1 331700156 10368306 complement(6825245..6826507) 1 NC_015312.1 KEGG: nfa:nfa21900 hypothetical protein; hypothetical protein 6826507 10368306 Psed_6451 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336395.1 6825245 R 675635 CDS YP_004336396.1 331700157 10368307 complement(6826504..6826761) 1 NC_015312.1 KEGG: nfa:nfa21910 hypothetical protein; hypothetical protein 6826761 10368307 Psed_6452 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336396.1 6826504 R 675635 CDS YP_004336397.1 331700158 10368308 complement(6826758..6827360) 1 NC_015312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa21920 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 6827360 10368308 Psed_6453 Pseudonocardia dioxanivorans CB1190 glyoxalase/bleomycin resistance protein/dioxygenase YP_004336397.1 6826758 R 675635 CDS YP_004336398.1 331700159 10368309 complement(6827449..6828225) 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_34320 TetR family transcriptional regulator; TetR family transcriptional regulator 6828225 10368309 Psed_6454 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336398.1 6827449 R 675635 CDS YP_004336399.1 331700160 10368310 complement(6828395..6829096) 1 NC_015312.1 KEGG: cse:Cseg_1400 hypothetical protein; hypothetical protein 6829096 10368310 Psed_6455 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336399.1 6828395 R 675635 CDS YP_004336400.1 331700161 10368311 complement(6829272..6829586) 1 NC_015312.1 hypothetical protein 6829586 10368311 Psed_6456 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336400.1 6829272 R 675635 CDS YP_004336401.1 331700162 10368312 complement(6829839..6830576) 1 NC_015312.1 KEGG: bpt:Bpet1649 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 6830576 10368312 Psed_6457 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004336401.1 6829839 R 675635 CDS YP_004336402.1 331700163 10368313 6830783..6832159 1 NC_015312.1 KEGG: sco:SCO1204 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase (NAD(P)(+)) 6832159 10368313 Psed_6458 Pseudonocardia dioxanivorans CB1190 succinate-semialdehyde dehydrogenase (NAD(P)(+)) YP_004336402.1 6830783 D 675635 CDS YP_004336403.1 331700164 10368314 6832193..6833608 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: dsy:DSY3923 hypothetical protein; major facilitator superfamily protein 6833608 10368314 Psed_6459 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004336403.1 6832193 D 675635 CDS YP_004336404.1 331700165 10368315 6833673..6834059 1 NC_015312.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: rec:RHECIAT_PC0000387 gamma-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 6834059 10368315 Psed_6460 Pseudonocardia dioxanivorans CB1190 carboxymuconolactone decarboxylase YP_004336404.1 6833673 D 675635 CDS YP_004336405.1 331700166 10368316 6834056..6834958 1 NC_015312.1 KEGG: mrd:Mrad2831_3250 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 6834958 10368316 Psed_6461 Pseudonocardia dioxanivorans CB1190 3-hydroxyisobutyrate dehydrogenase YP_004336405.1 6834056 D 675635 CDS YP_004336406.1 331700167 10368317 6834970..6835689 1 NC_015312.1 PFAM: Crotonase, core; KEGG: pzu:PHZ_p0199 enoyl-CoA hydratase/isomerase protein; enoyl-CoA hydratase 6835689 10368317 Psed_6462 Pseudonocardia dioxanivorans CB1190 enoyl-CoA hydratase YP_004336406.1 6834970 D 675635 CDS YP_004336407.1 331700168 10368318 6835686..6836432 1 NC_015312.1 KEGG: rer:RER_08290 hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 6836432 10368318 Psed_6463 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004336407.1 6835686 D 675635 CDS YP_004336408.1 331700169 10368319 6836425..6837363 1 NC_015312.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: dge:Dgeo_1081 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 6837363 10368319 Psed_6464 Pseudonocardia dioxanivorans CB1190 6-phosphogluconate dehydrogenase YP_004336408.1 6836425 D 675635 CDS YP_004336409.1 331700170 10368320 6837356..6838171 1 NC_015312.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rso:RSc0298 B-ketoadipate enol-lactone hydrolase; alpha/beta hydrolase 6838171 10368320 Psed_6465 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase YP_004336409.1 6837356 D 675635 CDS YP_004336410.1 331700171 10368321 complement(6838226..6839821) 1 NC_015312.1 KEGG: cwo:Cwoe_4118 transcriptional regulator, PucR family; PucR family transcriptional regulator 6839821 10368321 Psed_6466 Pseudonocardia dioxanivorans CB1190 PucR family transcriptional regulator YP_004336410.1 6838226 R 675635 CDS YP_004336411.1 331700172 10368322 6839941..6840933 1 NC_015312.1 KEGG: cwo:Cwoe_4112 5,10-methylenetetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup; 5,10-methylenetetrahydromethanopterin reductase 6840933 10368322 Psed_6467 Pseudonocardia dioxanivorans CB1190 5,10-methylenetetrahydromethanopterin reductase YP_004336411.1 6839941 D 675635 CDS YP_004336412.1 331700173 10368323 6840930..6842018 1 NC_015312.1 PFAM: Protein of unknown function DUF917; KEGG: cwo:Cwoe_4117 protein of unknown function DUF917; hypothetical protein 6842018 10368323 Psed_6468 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336412.1 6840930 D 675635 CDS YP_004336413.1 331700174 10368324 6842011..6843576 1 NC_015312.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: tbi:Tbis_2949 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 6843576 10368324 Psed_6469 Pseudonocardia dioxanivorans CB1190 hydantoinase/oxoprolinase YP_004336413.1 6842011 D 675635 CDS YP_004336414.1 331700175 10368325 6843684..6844535 1 NC_015312.1 PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; KEGG: dka:DKAM_0739 molybdopterin dehydrogenase FAD-binding; molybdopterin dehydrogenase FAD-binding protein 6844535 10368325 Psed_6470 Pseudonocardia dioxanivorans CB1190 molybdopterin dehydrogenase FAD-binding protein YP_004336414.1 6843684 D 675635 CDS YP_004336415.1 331700176 10368326 6844541..6845008 1 NC_015312.1 KEGG: cai:Caci_4735 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; xanthine dehydrogenase 6845008 10368326 Psed_6471 Pseudonocardia dioxanivorans CB1190 xanthine dehydrogenase YP_004336415.1 6844541 D 675635 CDS YP_004336416.1 331700177 10368327 6845005..6847326 1 NC_015312.1 KEGG: cwo:Cwoe_4113 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase 6847326 10368327 Psed_6472 Pseudonocardia dioxanivorans CB1190 xanthine dehydrogenase YP_004336416.1 6845005 D 675635 CDS YP_004336417.1 331700178 10368328 6847323..6849743 1 NC_015312.1 KEGG: cwo:Cwoe_4103 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 6849743 10368328 Psed_6473 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336417.1 6847323 D 675635 CDS YP_004336418.1 331700179 10368329 6849740..6850615 1 NC_015312.1 KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 6850615 10368329 Psed_6474 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336418.1 6849740 D 675635 CDS YP_004336419.1 331700180 10368330 6850612..6851148 1 NC_015312.1 KEGG: tro:trd_A0776 carbon monoxide dehydrogenase small chain (CO dehydrogenase subunit S) (CO-DH S); PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 6851148 10368330 Psed_6475 Pseudonocardia dioxanivorans CB1190 carbon-monoxide dehydrogenase YP_004336419.1 6850612 D 675635 CDS YP_004336420.1 331700181 10368331 complement(6851245..6851757) 1 NC_015312.1 hypothetical protein 6851757 10368331 Psed_6476 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336420.1 6851245 R 675635 CDS YP_004336421.1 331700182 10368332 6852057..6853559 1 NC_015312.1 KEGG: ava:Ava_1387 BNR repeat-containing glycosyl hydrolase; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase; peptidase M10A and M12B matrixin and adamalysin 6853559 10368332 Psed_6477 Pseudonocardia dioxanivorans CB1190 peptidase M10A and M12B matrixin and adamalysin YP_004336421.1 6852057 D 675635 CDS YP_004336422.1 331700183 10368334 complement(6854126..6855301) 1 NC_015312.1 PFAM: Luciferase-like, subgroup; KEGG: svi:Svir_26120 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; luciferase-like protein 6855301 10368334 Psed_6479 Pseudonocardia dioxanivorans CB1190 luciferase-like protein YP_004336422.1 6854126 R 675635 CDS YP_004336423.1 331700184 10368335 complement(6855343..6855780) 1 NC_015312.1 PFAM: Domain of unknown function DUF336; KEGG: mau:Micau_3758 hypothetical protein; hypothetical protein 6855780 10368335 Psed_6480 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336423.1 6855343 R 675635 CDS YP_004336424.1 331700185 10368336 complement(6855809..6856978) 1 NC_015312.1 KEGG: nar:Saro_1475 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 6856978 10368336 Psed_6481 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-ACP reductase YP_004336424.1 6855809 R 675635 CDS YP_004336425.1 331700186 10368337 6857204..6858226 1 NC_015312.1 KEGG: svi:Svir_26160 DNA-binding domain-containing protein, AraC-type; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6858226 10368337 Psed_6482 Pseudonocardia dioxanivorans CB1190 AraC family transcriptional regulator YP_004336425.1 6857204 D 675635 CDS YP_004336426.1 331700187 10368338 complement(6858594..6859799) 1 NC_015312.1 KEGG: sen:SACE_1570 hypothetical protein; hypothetical protein 6859799 10368338 Psed_6483 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336426.1 6858594 R 675635 CDS YP_004336427.1 331700188 10368339 complement(6859796..6860920) 1 NC_015312.1 KEGG: sma:SAV_7223 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02678; PFAM: Conserved hypothetical protein CHP02678; hypothetical protein 6860920 10368339 Psed_6484 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336427.1 6859796 R 675635 CDS YP_004336428.1 331700189 10368340 complement(6860913..6862397) 1 NC_015312.1 KEGG: sma:SAV_7222 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677; hypothetical protein 6862397 10368340 Psed_6485 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336428.1 6860913 R 675635 CDS YP_004336429.1 331700190 10368341 complement(6862394..6866461) 1 NC_015312.1 TIGRFAM: Conserved hypothetical protein CHP02680; KEGG: sma:SAV_7224 hypothetical protein; hypothetical protein 6866461 10368341 Psed_6486 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336429.1 6862394 R 675635 CDS YP_004336430.1 331700191 10368342 6866689..6868395 1 NC_015312.1 PFAM: ATPase, AAA-4; KEGG: xce:Xcel_3059 transcriptional regulator; transcriptional regulator 6868395 10368342 Psed_6487 Pseudonocardia dioxanivorans CB1190 transcriptional regulator YP_004336430.1 6866689 D 675635 CDS YP_004336431.1 331700192 10368344 complement(6868660..6869076) 1 NC_015312.1 PFAM: Protein of unknown function DUF1486; KEGG: gvi:glr2060 hypothetical protein; hypothetical protein 6869076 10368344 Psed_6488 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336431.1 6868660 R 675635 CDS YP_004336432.1 331700193 10368345 complement(6869105..6870256) 1 NC_015312.1 KEGG: sen:SACE_0379 DNA polymerase III, delta' subunit; TIGRFAM: DNA polymerase III, delta prime subunit; SMART: ATPase, AAA+ type, core; DNA polymerase III subunit delta' 6870256 10368345 Psed_6489 Pseudonocardia dioxanivorans CB1190 DNA polymerase III subunit delta' YP_004336432.1 6869105 R 675635 CDS YP_004336433.1 331700194 10368347 complement(6872694..6873557) 1 NC_015312.1 KEGG: rpe:RPE_2275 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit P20 6873557 10368347 Psed_6491 Pseudonocardia dioxanivorans CB1190 peptidase C14, caspase catalytic subunit P20 YP_004336433.1 6872694 R 675635 CDS YP_004336434.1 331700195 10368348 complement(6873620..6875959) 1 NC_015312.1 PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PASTA; KEGG: sen:SACE_0314 penicillin binding protein (class A); SMART: PASTA; peptidoglycan glycosyltransferase 6875959 10368348 Psed_6492 Pseudonocardia dioxanivorans CB1190 peptidoglycan glycosyltransferase YP_004336434.1 6873620 R 675635 CDS YP_004336435.1 331700196 10368349 6876166..6876522 1 NC_015312.1 PFAM: Transcription factor WhiB; KEGG: ami:Amir_0236 transcription factor WhiB; transcription factor WhiB 6876522 10368349 Psed_6493 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004336435.1 6876166 D 675635 CDS YP_004336436.1 331700197 10368350 6876910..6877227 1 NC_015312.1 SMART: Transcription regulator AbrB/SpoV, predicted; manually curated; TIGRFAM: Transcription regulator AbrB; KEGG: mno:Mnod_8631 SpoVT/AbrB domain protein; PFAM: Transcription regulator AbrB/SpoV, predicted; AbrB family transcriptional regulator 6877227 10368350 Psed_6494 Pseudonocardia dioxanivorans CB1190 AbrB family transcriptional regulator YP_004336436.1 6876910 D 675635 CDS YP_004336437.1 331700198 10368351 6877224..6877646 1 NC_015312.1 PFAM: PilT protein, N-terminal; KEGG: tkm:TK90_1566 PilT protein domain protein; twitching motility protein PilT 6877646 10368351 Psed_6495 Pseudonocardia dioxanivorans CB1190 twitching motility protein PilT YP_004336437.1 6877224 D 675635 CDS YP_004336438.1 331700199 10368352 complement(6878382..6878678) 1 NC_015312.1 KEGG: rop:ROP_28280 hypothetical protein; hypothetical protein 6878678 10368352 Psed_6496 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336438.1 6878382 R 675635 CDS YP_004336439.1 331700200 10368353 complement(6879215..6880396) 1 NC_015312.1 KEGG: svi:Svir_36230 oxyanion-translocating ATPase; oxyanion-translocating ATPase 6880396 10368353 Psed_6497 Pseudonocardia dioxanivorans CB1190 oxyanion-translocating ATPase YP_004336439.1 6879215 R 675635 CDS YP_004336440.1 331700201 10368354 complement(6880393..6881421) 1 NC_015312.1 KEGG: svi:Svir_36220 oxyanion-translocating ATPase; oxyanion-translocating ATPase 6881421 10368354 Psed_6498 Pseudonocardia dioxanivorans CB1190 oxyanion-translocating ATPase YP_004336440.1 6880393 R 675635 CDS YP_004336441.1 331700202 10368355 6881535..6881714 1 NC_015312.1 KEGG: mcu:HMPREF0573_10749 hypothetical protein; hypothetical protein 6881714 10368355 Psed_6499 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336441.1 6881535 D 675635 CDS YP_004336442.1 331700203 10368356 6881718..6882173 1 NC_015312.1 PFAM: Endoribonuclease L-PSP; KEGG: mav:MAV_0451 translation initiation inhibitor; endoribonuclease L-PSP 6882173 10368356 Psed_6500 Pseudonocardia dioxanivorans CB1190 endoribonuclease L-PSP YP_004336442.1 6881718 D 675635 CDS YP_004336443.1 331700204 10368357 6882176..6882787 1 NC_015312.1 KEGG: ami:Amir_0242 hypothetical protein; hypothetical protein 6882787 10368357 Psed_6501 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336443.1 6882176 D 675635 CDS YP_004336444.1 331700205 10368358 6882855..6885614 1 NC_015312.1 KEGG: ssc:100113399 basic proline-rich protein; hypothetical protein 6885614 10368358 Psed_6502 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336444.1 6882855 D 675635 CDS YP_004336445.1 331700206 10368359 complement(6885640..6886530) 1 NC_015312.1 PFAM: Oxidoreductase, N-terminal; KEGG: amd:AMED_9030 hypothetical protein; oxidoreductase domain-containing protein 6886530 10368359 Psed_6503 Pseudonocardia dioxanivorans CB1190 oxidoreductase domain-containing protein YP_004336445.1 6885640 R 675635 CDS YP_004336446.1 331700207 10368360 6886602..6887429 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: req:REQ_31840 NUDIX superfamily hydrolase; NUDIX hydrolase 6887429 10368360 Psed_6504 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004336446.1 6886602 D 675635 CDS YP_004336447.1 331700208 10368361 6887426..6888223 1 NC_015312.1 KEGG: ami:Amir_0248 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 6888223 10368361 Psed_6505 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004336447.1 6887426 D 675635 CDS YP_004336448.1 331700209 10368362 complement(6888234..6889463) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_8834 major facilitator transporter; major facilitator superfamily protein 6889463 10368362 Psed_6506 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004336448.1 6888234 R 675635 CDS YP_004336449.1 331700210 10368363 complement(6889517..6890191) 1 NC_015312.1 KEGG: ami:Amir_0253 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 6890191 10368363 Psed_6507 Pseudonocardia dioxanivorans CB1190 Crp/Fnr family transcriptional regulator YP_004336449.1 6889517 R 675635 CDS YP_004336450.1 331700211 10368364 complement(6890336..6890665) 1 NC_015312.1 KEGG: ami:Amir_0254 hypothetical protein; hypothetical protein 6890665 10368364 Psed_6508 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336450.1 6890336 R 675635 CDS YP_004336451.1 331700212 10368365 6890668..6891567 1 NC_015312.1 SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: mjl:Mjls_5203 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; endonuclease III 6891567 10368365 Psed_6509 Pseudonocardia dioxanivorans CB1190 endonuclease III YP_004336451.1 6890668 D 675635 CDS YP_004336452.1 331700213 10368366 6891593..6892246 1 NC_015312.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sen:SACE_0332 redoxin; alkyl hydroperoxide reductase 6892246 10368366 Psed_6510 Pseudonocardia dioxanivorans CB1190 alkyl hydroperoxide reductase YP_004336452.1 6891593 D 675635 CDS YP_004336453.1 331700214 10368367 6892243..6892941 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_0257 NUDIX hydrolase; NUDIX hydrolase 6892941 10368367 Psed_6511 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004336453.1 6892243 D 675635 CDS YP_004336454.1 331700215 10368368 6893103..6894305 1 NC_015312.1 PFAM: Colicin V production, CvpA; Peptidase S1/S6, chymotrypsin/Hap; KEGG: sen:SACE_0334 membrane-associated serine protease; colicin V production protein 6894305 10368368 Psed_6512 Pseudonocardia dioxanivorans CB1190 colicin V production protein YP_004336454.1 6893103 D 675635 CDS YP_004336455.1 331700216 10368369 complement(6895010..6896290) 1 NC_015312.1 KEGG: svi:Svir_38190 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; adenylosuccinate synthetase 6896290 10368369 Psed_6513 Pseudonocardia dioxanivorans CB1190 adenylosuccinate synthetase YP_004336455.1 6895010 R 675635 CDS YP_004336456.1 331700217 10368370 6896392..6897069 1 NC_015312.1 KEGG: svi:Svir_38200 hypothetical protein; hypothetical protein 6897069 10368370 Psed_6514 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336456.1 6896392 D 675635 CDS YP_004336457.1 331700218 10368371 6897146..6897448 1 NC_015312.1 PFAM: Urease, alpha/gamma subunit; TIGRFAM: Urease, alpha/gamma subunit; HAMAP: Urease, gamma subunit; KEGG: amd:AMED_8450 urease gamma subunit; urease subunit gamma 6897448 10368371 Psed_6515 Pseudonocardia dioxanivorans CB1190 urease subunit gamma YP_004336457.1 6897146 D 675635 CDS YP_004336458.1 331700219 10368372 6897448..6897825 1 NC_015312.1 PFAM: Urease, beta subunit; TIGRFAM: Urease, beta subunit; HAMAP: Urease, beta subunit; KEGG: ami:Amir_0507 urease, beta subunit; urease subunit beta 6897825 10368372 Psed_6516 Pseudonocardia dioxanivorans CB1190 urease subunit beta YP_004336458.1 6897448 D 675635 CDS YP_004336459.1 331700220 10368373 6897822..6899534 1 NC_015312.1 PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease, alpha subunit; KEGG: amd:AMED_8448 urease alpha subunit; urease subunit alpha 6899534 10368373 Psed_6517 Pseudonocardia dioxanivorans CB1190 urease subunit alpha YP_004336459.1 6897822 D 675635 CDS YP_004336460.1 331700221 10368374 6899534..6900217 1 NC_015312.1 KEGG: sen:SACE_0637 urease accessory protein; urease accessory protein 6900217 10368374 Psed_6518 Pseudonocardia dioxanivorans CB1190 urease accessory protein YP_004336460.1 6899534 D 675635 CDS YP_004336461.1 331700222 10368375 6900207..6900920 1 NC_015312.1 TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: amd:AMED_8446 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; urease accessory protein ureG 6900920 10368375 Psed_6519 Pseudonocardia dioxanivorans CB1190 urease accessory protein ureG YP_004336461.1 6900207 D 675635 CDS YP_004336462.1 331700223 10368376 6900922..6901773 1 NC_015312.1 KEGG: sen:SACE_0639 urease accessory protein; HAMAP: Urease accessory protein UreD; PFAM: Urease accessory protein UreD; urease accessory protein ureD 6901773 10368376 Psed_6520 Pseudonocardia dioxanivorans CB1190 urease accessory protein ureD YP_004336462.1 6900922 D 675635 CDS YP_004336463.1 331700224 10368377 complement(6901737..6902411) 1 NC_015312.1 KEGG: svi:Svir_06320 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 6902411 10368377 Psed_6521 Pseudonocardia dioxanivorans CB1190 phospholipid/glycerol acyltransferase YP_004336463.1 6901737 R 675635 CDS YP_004336464.1 331700225 10368378 complement(6902634..6903047) 1 NC_015312.1 KEGG: mjl:Mjls_0494 hypothetical protein; hypothetical protein 6903047 10368378 Psed_6522 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336464.1 6902634 R 675635 CDS YP_004336465.1 331700226 10368379 complement(6903159..6904190) 1 NC_015312.1 TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; KEGG: sen:SACE_7180 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase 6904190 10368379 Psed_6523 Pseudonocardia dioxanivorans CB1190 fructose-bisphosphate aldolase YP_004336465.1 6903159 R 675635 CDS YP_004336466.1 331700227 10368380 6904290..6905024 1 NC_015312.1 KEGG: svi:Svir_38280 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family; TIGRFAM: RNA polymerase sigma-E type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 6905024 10368380 Psed_6524 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004336466.1 6904290 D 675635 CDS YP_004336467.1 331700228 10368381 6905057..6905476 1 NC_015312.1 hypothetical protein 6905476 10368381 Psed_6525 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336467.1 6905057 D 675635 CDS YP_004336468.1 331700229 10368382 6905505..6906191 1 NC_015312.1 PFAM: SNARE associated Golgi protein; KEGG: ami:Amir_6926 SNARE associated Golgi protein; hypothetical protein 6906191 10368382 Psed_6526 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336468.1 6905505 D 675635 CDS YP_004336469.1 331700230 10368383 6906235..6907092 1 NC_015312.1 PFAM: SNARE associated Golgi protein; KEGG: ami:Amir_6928 SNARE associated Golgi protein; hypothetical protein 6907092 10368383 Psed_6527 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336469.1 6906235 D 675635 CDS YP_004336470.1 331700231 10368384 complement(6907097..6908149) 1 NC_015312.1 PFAM: Glycoside hydrolase, family 76; KEGG: ami:Amir_6932 glycoside hydrolase 76; glycosyl hydrolase protein 6908149 10368384 Psed_6528 Pseudonocardia dioxanivorans CB1190 glycosyl hydrolase protein YP_004336470.1 6907097 R 675635 CDS YP_004336471.1 331700232 10368385 complement(6908208..6909659) 1 NC_015312.1 KEGG: amd:AMED_4850 hypothetical protein; PFAM: Amidohydrolase 1; S-adenosylhomocysteine deaminase 6909659 10368385 Psed_6529 Pseudonocardia dioxanivorans CB1190 S-adenosylhomocysteine deaminase YP_004336471.1 6908208 R 675635 CDS YP_004336472.1 331700233 10368386 6909876..6910679 1 NC_015312.1 KEGG: amd:AMED_4851 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 6910679 10368386 Psed_6530 Pseudonocardia dioxanivorans CB1190 IclR family transcriptional regulator YP_004336472.1 6909876 D 675635 CDS YP_004336473.1 331700234 10368387 6910748..6911929 1 NC_015312.1 KEGG: amd:AMED_4852 predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase III; formyl-CoA transferase 6911929 10368387 Psed_6531 Pseudonocardia dioxanivorans CB1190 formyl-CoA transferase YP_004336473.1 6910748 D 675635 CDS YP_004336474.1 331700235 10368388 6911922..6912737 1 NC_015312.1 KEGG: nml:Namu_0045 citrate synthase; citrate synthase 6912737 10368388 Psed_6532 Pseudonocardia dioxanivorans CB1190 citrate synthase YP_004336474.1 6911922 D 675635 CDS YP_004336475.1 331700236 10368389 6912730..6913596 1 NC_015312.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: nml:Namu_0046 extradiol ring-cleavage dioxygenase class III protein subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 6913596 10368389 Psed_6533 Pseudonocardia dioxanivorans CB1190 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004336475.1 6912730 D 675635 CDS YP_004336476.1 331700237 10368390 6913589..6913951 1 NC_015312.1 KEGG: nml:Namu_0047 hypothetical protein; hypothetical protein 6913951 10368390 Psed_6534 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336476.1 6913589 D 675635 CDS YP_004336477.1 331700238 10368391 6913948..6914919 1 NC_015312.1 KEGG: nml:Namu_0050 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase 6914919 10368391 Psed_6535 Pseudonocardia dioxanivorans CB1190 alcohol dehydrogenase YP_004336477.1 6913948 D 675635 CDS YP_004336478.1 331700239 10368392 complement(6914941..6915855) 1 NC_015312.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: fre:Franean1_1892 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 6915855 10368392 Psed_6536 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004336478.1 6914941 R 675635 CDS YP_004336479.1 331700240 10368393 complement(6916017..6916703) 1 NC_015312.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: svi:Svir_38470 rRNA methylase; tRNA/rRNA methyltransferase SpoU 6916703 10368393 Psed_6537 Pseudonocardia dioxanivorans CB1190 tRNA/rRNA methyltransferase SpoU YP_004336479.1 6916017 R 675635 CDS YP_004336480.1 331700241 10368394 complement(6916879..6919293) 1 NC_015312.1 KEGG: sro:Sros_6483 ATP-dependent Zn protease-like protein; PFAM: ATPase, AAA-type, core; Peptidase M41; SMART: ATPase, AAA+ type, core; ATPase AAA 6919293 10368394 Psed_6538 Pseudonocardia dioxanivorans CB1190 ATPase AAA YP_004336480.1 6916879 R 675635 CDS YP_004336481.1 331700242 10368395 complement(6919290..6919958) 1 NC_015312.1 KEGG: sro:Sros_6484 hypothetical protein; hypothetical protein 6919958 10368395 Psed_6539 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336481.1 6919290 R 675635 CDS YP_004336482.1 331700243 10368396 complement(6920113..6920664) 1 NC_015312.1 TIGRFAM: Orotate phosphoribosyl transferase, clade 1; KEGG: svi:Svir_38490 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; orotate phosphoribosyltransferase 6920664 10368396 Psed_6540 Pseudonocardia dioxanivorans CB1190 orotate phosphoribosyltransferase YP_004336482.1 6920113 R 675635 CDS YP_004336483.1 331700244 10368397 complement(6920792..6921565) 1 NC_015312.1 KEGG: ami:Amir_6941 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 6921565 10368397 Psed_6541 Pseudonocardia dioxanivorans CB1190 short-chain dehydrogenase/reductase SDR YP_004336483.1 6920792 R 675635 CDS YP_004336484.1 331700245 10368398 complement(6921787..6922449) 1 NC_015312.1 KEGG: sen:SACE_7191 hypothetical protein; hypothetical protein 6922449 10368398 Psed_6542 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336484.1 6921787 R 675635 CDS YP_004336485.1 331700246 10368399 complement(6922516..6923469) 1 NC_015312.1 KEGG: amd:AMED_6632 hypothetical protein; hypothetical protein 6923469 10368399 Psed_6543 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336485.1 6922516 R 675635 CDS YP_004336486.1 331700247 10368400 complement(6923466..6923771) 1 NC_015312.1 hypothetical protein 6923771 10368400 Psed_6544 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336486.1 6923466 R 675635 CDS YP_004336487.1 331700248 10368402 complement(6925275..6925637) 1 NC_015312.1 KEGG: ami:Amir_3481 hypothetical protein; hypothetical protein 6925637 10368402 Psed_6546 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336487.1 6925275 R 675635 CDS YP_004336488.1 331700249 10368403 complement(6925746..6928361) 1 NC_015312.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: ami:Amir_6943 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 6928361 10368403 Psed_6547 Pseudonocardia dioxanivorans CB1190 ATP-dependent chaperone ClpB YP_004336488.1 6925746 R 675635 CDS YP_004336489.1 331700250 10368404 6928516..6929727 1 NC_015312.1 PFAM: ATPase, AAA-type, core; KEGG: mmi:MMAR_1535 ATPase; SMART: ATPase, AAA+ type, core; Microtubule-severing ATPase 6929727 10368404 Psed_6548 Pseudonocardia dioxanivorans CB1190 Microtubule-severing ATPase YP_004336489.1 6928516 D 675635 CDS YP_004336490.1 331700251 10368405 6929797..6930834 1 NC_015312.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; KEGG: mmi:MMAR_1536 hypothetical protein; hypothetical protein 6930834 10368405 Psed_6549 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336490.1 6929797 D 675635 CDS YP_004336491.1 331700252 10368406 complement(6930842..6931564) 1 NC_015312.1 KEGG: sen:SACE_7205 hypothetical protein; manually curated; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 6931564 10368406 Psed_6550 Pseudonocardia dioxanivorans CB1190 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004336491.1 6930842 R 675635 CDS YP_004336492.1 331700253 10368407 6931871..6933067 1 NC_015312.1 KEGG: ami:Amir_6945 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Globin, subset; Oxidoreductase, FAD-binding domain; nitric oxide dioxygenase 6933067 10368407 Psed_6551 Pseudonocardia dioxanivorans CB1190 nitric oxide dioxygenase YP_004336492.1 6931871 D 675635 CDS YP_004336493.1 331700254 10368408 complement(6933215..6933682) 1 NC_015312.1 KEGG: sen:SACE_7207 heat shock regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 6933682 10368408 Psed_6552 Pseudonocardia dioxanivorans CB1190 MerR family transcriptional regulator YP_004336493.1 6933215 R 675635 CDS YP_004336494.1 331700255 10368409 complement(6933688..6934875) 1 NC_015312.1 SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: ami:Amir_6947 chaperone protein DnaJ; HAMAP: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 6934875 10368409 Psed_6553 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaJ YP_004336494.1 6933688 R 675635 CDS YP_004336495.1 331700256 10368410 complement(6934895..6935593) 1 NC_015312.1 KEGG: amd:AMED_9165 molecular chaperone GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE 6935593 10368410 Psed_6554 Pseudonocardia dioxanivorans CB1190 protein grpE YP_004336495.1 6934895 R 675635 CDS YP_004336496.1 331700257 10368411 complement(6935590..6937446) 1 NC_015312.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: ami:Amir_6949 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 6937446 10368411 Psed_6555 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaK YP_004336496.1 6935590 R 675635 CDS YP_004336497.1 331700258 10368412 6938803..6940059 1 NC_015312.1 KEGG: sen:SACE_2096 PE-PGRS family protein; hypothetical protein 6940059 10368412 Psed_6556 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336497.1 6938803 D 675635 CDS YP_004336498.1 331700259 10368413 6940056..6940823 1 NC_015312.1 KEGG: svi:Svir_38140 hypothetical protein; hypothetical protein 6940823 10368413 Psed_6557 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336498.1 6940056 D 675635 CDS YP_004336499.1 331700260 10368414 complement(6941200..6941631) 1 NC_015312.1 KEGG: sen:SACE_1599 hypothetical protein; hypothetical protein 6941631 10368414 Psed_6558 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336499.1 6941200 R 675635 CDS YP_004336500.1 331700261 10368415 complement(6941678..6942694) 1 NC_015312.1 PFAM: NLP/P60; KEGG: amd:AMED_1189 lipoprotein; NLP/P60 protein 6942694 10368415 Psed_6559 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004336500.1 6941678 R 675635 CDS YP_004336501.1 331700262 10368416 complement(6942699..6943286) 1 NC_015312.1 KEGG: amd:AMED_1188 hypothetical protein; hypothetical protein 6943286 10368416 Psed_6560 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336501.1 6942699 R 675635 CDS YP_004336502.1 331700263 10368417 complement(6943289..6945265) 1 NC_015312.1 KEGG: sen:SACE_1596 hypothetical protein; hypothetical protein 6945265 10368417 Psed_6561 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336502.1 6943289 R 675635 CDS YP_004336503.1 331700264 10368418 complement(6945262..6948318) 1 NC_015312.1 KEGG: ami:Amir_0886 hypothetical protein; hypothetical protein 6948318 10368418 Psed_6562 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336503.1 6945262 R 675635 CDS YP_004336504.1 331700265 10368419 complement(6948305..6948988) 1 NC_015312.1 KEGG: sen:SACE_1594 hypothetical protein; hypothetical protein 6948988 10368419 Psed_6563 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336504.1 6948305 R 675635 CDS YP_004336505.1 331700266 10368420 complement(6948993..6949256) 1 NC_015312.1 KEGG: amd:AMED_1184 hypothetical protein; hypothetical protein 6949256 10368420 Psed_6564 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336505.1 6948993 R 675635 CDS YP_004336506.1 331700267 10368421 complement(6949541..6951835) 1 NC_015312.1 PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: amd:AMED_4355 Fe-S oxidoreductase; hypothetical protein 6951835 10368421 Psed_6565 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336506.1 6949541 R 675635 CDS YP_004336507.1 331700268 10368422 complement(6952108..6953226) 1 NC_015312.1 KEGG: spu:591086 similar to Nucb2b protein; hypothetical protein 6953226 10368422 Psed_6566 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336507.1 6952108 R 675635 CDS YP_004336508.1 331700269 10368423 complement(6953380..6953985) 1 NC_015312.1 KEGG: sro:Sros_4334 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6953985 10368423 Psed_6567 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336508.1 6953380 R 675635 CDS YP_004336509.1 331700270 10368424 complement(6953982..6955139) 1 NC_015312.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: gob:Gobs_4837 integral membrane sensor signal transduction histidine kinase; histidine kinase 6955139 10368424 Psed_6568 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004336509.1 6953982 R 675635 CDS YP_004336510.1 331700271 10368425 6955243..6956280 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sen:SACE_0789 ABC-type transporter, ATPase component; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 6956280 10368425 Psed_6569 Pseudonocardia dioxanivorans CB1190 sulfate-transporting ATPase YP_004336510.1 6955243 D 675635 CDS YP_004336511.1 331700272 10368426 6956277..6957044 1 NC_015312.1 PFAM: ABC-2 type transporter; KEGG: cwo:Cwoe_5631 ABC-2 type transporter; ABC transporter 6957044 10368426 Psed_6570 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004336511.1 6956277 D 675635 CDS YP_004336512.1 331700273 10368427 complement(6957068..6957649) 1 NC_015312.1 TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: ami:Amir_6959 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain; Deoxycytidine triphosphate deaminase 6957649 10368427 Psed_6571 Pseudonocardia dioxanivorans CB1190 Deoxycytidine triphosphate deaminase YP_004336512.1 6957068 R 675635 CDS YP_004336513.1 331700274 10368428 complement(6957699..6958817) 1 NC_015312.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mjl:Mjls_1351 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 6958817 10368428 Psed_6572 Pseudonocardia dioxanivorans CB1190 UDP-N-acetylglucosamine 2-epimerase YP_004336513.1 6957699 R 675635 CDS YP_004336514.1 331700275 10368430 complement(6959399..6960478) 1 NC_015312.1 PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_2379 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein 6960478 10368430 Psed_6573 Pseudonocardia dioxanivorans CB1190 monooxygenase FAD-binding protein YP_004336514.1 6959399 R 675635 CDS YP_004336515.1 331700276 10368431 6960608..6961222 1 NC_015312.1 PFAM: Tetracycline transcriptional regulator, TetR, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO7624 TetR family transcriptional regulator; tetracycline repressor 6961222 10368431 Psed_6574 Pseudonocardia dioxanivorans CB1190 tetracycline repressor YP_004336515.1 6960608 D 675635 CDS YP_004336516.1 331700277 10368432 6961242..6961697 1 NC_015312.1 KEGG: sco:SCO3065 hypothetical protein; hypothetical protein 6961697 10368432 Psed_6575 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336516.1 6961242 D 675635 CDS YP_004336517.1 331700278 10368433 6961705..6962301 1 NC_015312.1 KEGG: cfl:Cfla_3584 ATP-binding membrane protein; ATP-binding membrane protein 6962301 10368433 Psed_6576 Pseudonocardia dioxanivorans CB1190 ATP-binding membrane protein YP_004336517.1 6961705 D 675635 CDS YP_004336518.1 331700279 10368434 complement(6962312..6962776) 1 NC_015312.1 KEGG: kfl:Kfla_3254 hypothetical protein; hypothetical protein 6962776 10368434 Psed_6577 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336518.1 6962312 R 675635 CDS YP_004336519.1 331700280 10368435 complement(6963016..6963777) 1 NC_015312.1 KEGG: scl:sce4225 hypothetical protein; hypothetical protein 6963777 10368435 Psed_6578 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336519.1 6963016 R 675635 CDS YP_004336520.1 331700281 10368436 complement(6963881..6964924) 1 NC_015312.1 PFAM: NLP/P60; KEGG: svi:Svir_07310 cell wall-associated hydrolase, invasion-associated protein; NLP/P60 protein 6964924 10368436 Psed_6579 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004336520.1 6963881 R 675635 CDS YP_004336521.1 331700282 10368437 complement(6964924..6965424) 1 NC_015312.1 KEGG: sen:SACE_1597 hypothetical protein; hypothetical protein 6965424 10368437 Psed_6580 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336521.1 6964924 R 675635 CDS YP_004336522.1 331700283 10368438 complement(6965421..6966956) 1 NC_015312.1 KEGG: sen:SACE_1596 hypothetical protein; hypothetical protein 6966956 10368438 Psed_6581 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336522.1 6965421 R 675635 CDS YP_004336523.1 331700284 10368439 complement(6966953..6969481) 1 NC_015312.1 KEGG: svi:Svir_07280 hypothetical protein; hypothetical protein 6969481 10368439 Psed_6582 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336523.1 6966953 R 675635 CDS YP_004336524.1 331700285 10368440 complement(6969478..6969882) 1 NC_015312.1 KEGG: svi:Svir_07270 hypothetical protein; hypothetical protein 6969882 10368440 Psed_6583 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336524.1 6969478 R 675635 CDS YP_004336525.1 331700286 10368441 complement(6970026..6971024) 1 NC_015312.1 KEGG: amd:AMED_1801 hypothetical protein; hypothetical protein 6971024 10368441 Psed_6584 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336525.1 6970026 R 675635 CDS YP_004336526.1 331700287 10368442 6971259..6972005 1 NC_015312.1 KEGG: kfl:Kfla_2555 hypothetical protein; hypothetical protein 6972005 10368442 Psed_6585 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336526.1 6971259 D 675635 CDS YP_004336527.1 331700288 10368443 6972037..6973602 1 NC_015312.1 KEGG: mva:Mvan_5243 hypothetical protein; hypothetical protein 6973602 10368443 Psed_6586 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336527.1 6972037 D 675635 CDS YP_004336528.1 331700289 10368444 6973605..6975353 1 NC_015312.1 PFAM: Transglycosylase-like; KEGG: svi:Svir_32470 hypothetical protein; transglycosylase-like domain-containing protein 6975353 10368444 Psed_6587 Pseudonocardia dioxanivorans CB1190 transglycosylase-like domain-containing protein YP_004336528.1 6973605 D 675635 CDS YP_004336529.1 331700290 10368445 6975377..6977041 1 NC_015312.1 KEGG: tfu:Tfu_0073 chromosome partitioning ATPase; chromosome partitioning ATPase 6977041 10368445 Psed_6588 Pseudonocardia dioxanivorans CB1190 chromosome partitioning ATPase YP_004336529.1 6975377 D 675635 CDS YP_004336530.1 331700291 10368446 complement(6977058..6977876) 1 NC_015312.1 KEGG: ske:Sked_11770 hypothetical protein; hypothetical protein 6977876 10368446 Psed_6589 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336530.1 6977058 R 675635 CDS YP_004336531.1 331700292 10368447 complement(6978130..6978405) 1 NC_015312.1 hypothetical protein 6978405 10368447 Psed_6590 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336531.1 6978130 R 675635 CDS YP_004336532.1 331700293 10368448 complement(6978587..6980554) 1 NC_015312.1 PFAM: Heat shock protein 70; KEGG: aau:AAur_3285 DnaK family protein; molecular chaperone DnaK 6980554 10368448 Psed_6591 Pseudonocardia dioxanivorans CB1190 molecular chaperone DnaK YP_004336532.1 6978587 R 675635 CDS YP_004336533.1 331700294 10368449 6980947..6981819 1 NC_015312.1 KEGG: ach:Achl_3085 hypothetical protein; hypothetical protein 6981819 10368449 Psed_6592 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336533.1 6980947 D 675635 CDS YP_004336534.1 331700295 10368450 6981942..6982793 1 NC_015312.1 KEGG: ach:Achl_3085 hypothetical protein; hypothetical protein 6982793 10368450 Psed_6593 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336534.1 6981942 D 675635 CDS YP_004336535.1 331700296 10368451 6982968..6984833 1 NC_015312.1 KEGG: aau:AAur_3282 hypothetical protein; hypothetical protein 6984833 10368451 Psed_6594 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336535.1 6982968 D 675635 CDS YP_004336536.1 331700297 10368452 6984830..6986329 1 NC_015312.1 PFAM: GTP-binding protein, HSR1-related; KEGG: ach:Achl_3083 GTPase of unknown function; GTP-binding protein HSR1-like protein 6986329 10368452 Psed_6595 Pseudonocardia dioxanivorans CB1190 GTP-binding protein HSR1-like protein YP_004336536.1 6984830 D 675635 CDS YP_004336537.1 331700298 10368453 complement(6986438..6986896) 1 NC_015312.1 KEGG: amd:AMED_2993 isoquinoline 1-oxidoreductase alpha subunit; PFAM: [2Fe-2S]-binding; Ferredoxin; Isoquinoline 1-oxidoreductase 6986896 10368453 Psed_6596 Pseudonocardia dioxanivorans CB1190 Isoquinoline 1-oxidoreductase YP_004336537.1 6986438 R 675635 CDS YP_004336538.1 331700299 10368454 complement(6986901..6989162) 1 NC_015312.1 KEGG: amd:AMED_2992 isoquinoline 1-oxidoreductase beta subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Isoquinoline 1-oxidoreductase 6989162 10368454 Psed_6597 Pseudonocardia dioxanivorans CB1190 Isoquinoline 1-oxidoreductase YP_004336538.1 6986901 R 675635 CDS YP_004336539.1 331700300 10368455 complement(6989980..6992787) 1 NC_015312.1 KEGG: ami:Amir_0559 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6992787 10368455 Psed_6598 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336539.1 6989980 R 675635 CDS YP_004336540.1 331700301 10368456 complement(6992976..6994040) 1 NC_015312.1 KEGG: ddr:Deide_2p01860 bifunctional protein, precursor : N-acetylmuramoyl-L-alanine amidase; muramoylpentapeptide carboxypeptidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; Twin-arginine translocation pathway, signal sequence, bacterial/archaeal; Peptidoglycan binding-like; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; Peptidoglycan recognition protein, metazoa/bacteria; N-acetylmuramoyl-L-alanine amidase 6994040 10368456 Psed_6599 Pseudonocardia dioxanivorans CB1190 N-acetylmuramoyl-L-alanine amidase YP_004336540.1 6992976 R 675635 CDS YP_004336541.1 331700302 10368457 6994227..6996086 1 NC_015312.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: ami:Amir_6963 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 6996086 10368457 Psed_6600 Pseudonocardia dioxanivorans CB1190 acyl-CoA dehydrogenase YP_004336541.1 6994227 D 675635 CDS YP_004336542.1 331700303 10368458 complement(6996163..6996588) 1 NC_015312.1 KEGG: rop:ROP_02680 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein 6996588 10368458 Psed_6601 Pseudonocardia dioxanivorans CB1190 CBS domain-containing protein YP_004336542.1 6996163 R 675635 CDS YP_004336543.1 331700304 10368459 complement(6996693..6999149) 1 NC_015312.1 PFAM: Vancomycin resistance VanW; KEGG: mva:Mvan_1124 VanW family protein; von Willebrand factor A 6999149 10368459 Psed_6602 Pseudonocardia dioxanivorans CB1190 von Willebrand factor A YP_004336543.1 6996693 R 675635 CDS YP_004336544.1 331700305 10368460 complement(7000245..7000565) 1 NC_015312.1 manually curated; PFAM: Chaperonin Cpn10; KEGG: sen:SACE_7319 GroES family molecular chaperone; SMART: Chaperonin Cpn10; chaperonin Cpn10 7000565 10368460 Psed_6603 Pseudonocardia dioxanivorans CB1190 chaperonin Cpn10 YP_004336544.1 7000245 R 675635 CDS YP_004336545.1 331700306 10368461 complement(7000790..7001980) 1 NC_015312.1 KEGG: sen:SACE_7308 hypothetical protein; hypothetical protein 7001980 10368461 Psed_6604 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336545.1 7000790 R 675635 CDS YP_004336546.1 331700307 10368462 7002209..7002823 1 NC_015312.1 PFAM: Protein of unknown function DUF541; KEGG: ami:Amir_6970 protein of unknown function DUF541; hypothetical protein 7002823 10368462 Psed_6605 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336546.1 7002209 D 675635 CDS YP_004336547.1 331700308 10368463 7002820..7003392 1 NC_015312.1 KEGG: ami:Amir_2415 hypothetical protein; hypothetical protein 7003392 10368463 Psed_6606 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336547.1 7002820 D 675635 CDS YP_004336548.1 331700309 10368464 complement(7003835..7004455) 1 NC_015312.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: nml:Namu_2963 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 7004455 10368464 Psed_6607 Pseudonocardia dioxanivorans CB1190 FxsA cytoplasmic membrane protein YP_004336548.1 7003835 R 675635 CDS YP_004336549.1 331700310 10368465 complement(7004525..7005943) 1 NC_015312.1 KEGG: sen:SACE_7296 dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase 7005943 10368465 Psed_6608 Pseudonocardia dioxanivorans CB1190 dihydrolipoyllysine-residue acetyltransferase YP_004336549.1 7004525 R 675635 CDS YP_004336550.1 331700311 10368466 complement(7005940..7006914) 1 NC_015312.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: sen:SACE_7295 pyruvate dehydrogenase E1 component beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 7006914 10368466 Psed_6609 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase YP_004336550.1 7005940 R 675635 CDS YP_004336551.1 331700312 10368467 complement(7006916..7008163) 1 NC_015312.1 TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit subgroup x; KEGG: sen:SACE_7294 pyruvate dehydrogenase E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase E1 component subunit alpha 7008163 10368467 Psed_6610 Pseudonocardia dioxanivorans CB1190 pyruvate dehydrogenase E1 component subunit alpha YP_004336551.1 7006916 R 675635 CDS YP_004336552.1 331700313 10368468 complement(7008403..7008618) 1 NC_015312.1 KEGG: amd:AMED_3003 hypothetical protein; hypothetical protein 7008618 10368468 Psed_6611 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336552.1 7008403 R 675635 CDS YP_004336553.1 331700314 10368469 7008834..7009754 1 NC_015312.1 KEGG: amd:AMED_9209 ABC transport system substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein 7009754 10368469 Psed_6612 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004336553.1 7008834 D 675635 CDS YP_004336554.1 331700315 10368470 7009757..7010665 1 NC_015312.1 KEGG: amd:AMED_9208 permease component of ABC-type amino acid transport system; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 7010665 10368470 Psed_6613 Pseudonocardia dioxanivorans CB1190 polar amino acid ABC transporter permease YP_004336554.1 7009757 D 675635 CDS YP_004336555.1 331700316 10368471 7010662..7011423 1 NC_015312.1 PFAM: ABC transporter-like; KEGG: sgr:SGR_2239 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 7011423 10368471 Psed_6614 Pseudonocardia dioxanivorans CB1190 Fe(3+)-transporting ATPase YP_004336555.1 7010662 D 675635 CDS YP_004336556.1 331700317 10368472 complement(7011434..7012015) 1 NC_015312.1 KEGG: amd:AMED_9241 carboxymuconolactone decarboxylase; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein 7012015 10368472 Psed_6615 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336556.1 7011434 R 675635 CDS YP_004336557.1 331700318 10368473 complement(7012080..7013966) 1 NC_015312.1 KEGG: tbi:Tbis_1574 superfamily I DNA/RNA helicase; hypothetical protein 7013966 10368473 Psed_6616 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336557.1 7012080 R 675635 CDS YP_004336558.1 331700319 10368474 complement(7014306..7015997) 1 NC_015312.1 PFAM: Sodium/solute symporter; KEGG: amd:AMED_9243 solute:Na+ symporter, SSS family; Na+/solute symporter 7015997 10368474 Psed_6617 Pseudonocardia dioxanivorans CB1190 Na+/solute symporter YP_004336558.1 7014306 R 675635 CDS YP_004336559.1 331700320 10368475 complement(7015994..7016287) 1 NC_015312.1 KEGG: ami:Amir_6998 hypothetical protein; hypothetical protein 7016287 10368475 Psed_6618 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336559.1 7015994 R 675635 CDS YP_004336560.1 331700321 10368476 complement(7016435..7018258) 1 NC_015312.1 HAMAP: Phosphoenolpyruvate carboxykinase, GTP-utilising; KEGG: ami:Amir_6994 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising; phosphoenolpyruvate carboxykinase 7018258 10368476 Psed_6619 Pseudonocardia dioxanivorans CB1190 phosphoenolpyruvate carboxykinase YP_004336560.1 7016435 R 675635 CDS YP_004336561.1 331700322 10368477 complement(7018483..7019259) 1 NC_015312.1 KEGG: sro:Sros_4058 esterase; esterase 7019259 10368477 Psed_6620 Pseudonocardia dioxanivorans CB1190 esterase YP_004336561.1 7018483 R 675635 CDS YP_004336562.1 331700323 10368478 7019321..7020277 1 NC_015312.1 KEGG: sro:Sros_4059 helix-turn-helix, type 11; type 11 helix-turn-helix protein 7020277 10368478 Psed_6621 Pseudonocardia dioxanivorans CB1190 type 11 helix-turn-helix protein YP_004336562.1 7019321 D 675635 CDS YP_004336563.1 331700324 10368479 complement(7020404..7021372) 1 NC_015312.1 KEGG: bcv:Bcav_1650 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; LysR family transcriptional regulator 7021372 10368479 Psed_6622 Pseudonocardia dioxanivorans CB1190 LysR family transcriptional regulator YP_004336563.1 7020404 R 675635 CDS YP_004336564.1 331700325 10368480 7021446..7022114 1 NC_015312.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: xce:Xcel_2243 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 7022114 10368480 Psed_6623 Pseudonocardia dioxanivorans CB1190 lysine exporter protein LysE/YggA YP_004336564.1 7021446 D 675635 CDS YP_004336565.1 331700326 10368481 complement(7022074..7023657) 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bcv:Bcav_3406 major facilitator superfamily MFS_1; major facilitator superfamily protein 7023657 10368481 Psed_6624 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004336565.1 7022074 R 675635 CDS YP_004336566.1 331700327 10368482 7023886..7024449 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bcv:Bcav_3407 transcriptional regulator, TetR family; TetR family transcriptional regulator 7024449 10368482 Psed_6625 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336566.1 7023886 D 675635 CDS YP_004336567.1 331700328 10368483 complement(7024332..7025897) 1 NC_015312.1 KEGG: ami:Amir_4799 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 7025897 10368483 Psed_6626 Pseudonocardia dioxanivorans CB1190 pentachlorophenol monooxygenase YP_004336567.1 7024332 R 675635 CDS YP_004336568.1 331700329 10368484 7025990..7026724 1 NC_015312.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_7123 TetR family transcriptional regulator; TetR family transcriptional regulator 7026724 10368484 Psed_6627 Pseudonocardia dioxanivorans CB1190 TetR family transcriptional regulator YP_004336568.1 7025990 D 675635 CDS YP_004336569.1 331700330 10368485 7026832..7027263 1 NC_015312.1 KEGG: sen:SACE_4158 hypothetical protein; hypothetical protein 7027263 10368485 Psed_6628 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336569.1 7026832 D 675635 CDS YP_004336570.1 331700331 10368486 complement(7027271..7027576) 1 NC_015312.1 hypothetical protein 7027576 10368486 Psed_6629 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336570.1 7027271 R 675635 CDS YP_004336571.1 331700332 10368487 complement(7027828..7029243) 1 NC_015312.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: rer:RER_31370 hypothetical protein; peptidase U62 7029243 10368487 Psed_6630 Pseudonocardia dioxanivorans CB1190 peptidase U62 YP_004336571.1 7027828 R 675635 CDS YP_004336572.1 331700333 10368488 complement(7029240..7030754) 1 NC_015312.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: req:REQ_23720 peptidase; peptidase U62 7030754 10368488 Psed_6631 Pseudonocardia dioxanivorans CB1190 peptidase U62 YP_004336572.1 7029240 R 675635 CDS YP_004336573.1 331700334 10368489 complement(7030793..7031146) 1 NC_015312.1 hypothetical protein 7031146 10368489 Psed_6632 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336573.1 7030793 R 675635 CDS YP_004336574.1 331700335 10368490 complement(7031143..7031946) 1 NC_015312.1 KEGG: mjl:Mjls_0164 hypothetical protein; hypothetical protein 7031946 10368490 Psed_6633 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336574.1 7031143 R 675635 CDS YP_004336575.1 331700336 10368491 complement(7032018..7034174) 1 NC_015312.1 PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: ami:Amir_7071 hypothetical protein; hypothetical protein 7034174 10368491 Psed_6634 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336575.1 7032018 R 675635 CDS YP_004336576.1 331700337 10368492 7034332..7035054 1 NC_015312.1 TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N-7) methyltransferase; KEGG: sen:SACE_7256 tRNA (guanine-N7-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 7035054 10368492 Psed_6635 Pseudonocardia dioxanivorans CB1190 tRNA (guanine-N(7)-)-methyltransferase YP_004336576.1 7034332 D 675635 CDS YP_004336577.1 331700338 10368493 7035143..7036396 1 NC_015312.1 KEGG: amd:AMED_4154 nitric-oxide synthase; PFAM: Nitric oxide synthase, oxygenase domain; nitric-oxide synthase 7036396 10368493 Psed_6636 Pseudonocardia dioxanivorans CB1190 nitric-oxide synthase YP_004336577.1 7035143 D 675635 CDS YP_004336578.1 331700339 10368494 complement(7036403..7036861) 1 NC_015312.1 KEGG: ace:Acel_1660 phenylacetic acid degradation protein PaaD; TIGRFAM: Phenylacetic acid degradation protein PaaD; Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation protein PaaD 7036861 10368494 Psed_6637 Pseudonocardia dioxanivorans CB1190 phenylacetic acid degradation protein PaaD YP_004336578.1 7036403 R 675635 CDS YP_004336579.1 331700340 10368495 complement(7036880..7038217) 1 NC_015312.1 KEGG: ach:Achl_2866 histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 7038217 10368495 Psed_6638 Pseudonocardia dioxanivorans CB1190 histidine kinase YP_004336579.1 7036880 R 675635 CDS YP_004336580.1 331700341 10368496 complement(7038219..7038884) 1 NC_015312.1 KEGG: gob:Gobs_1115 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 7038884 10368496 Psed_6639 Pseudonocardia dioxanivorans CB1190 LuxR family transcriptional regulator YP_004336580.1 7038219 R 675635 CDS YP_004336581.1 331700342 10368497 7038949..7039995 1 NC_015312.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: saq:Sare_1431 extracellular solute-binding protein; ABC transporter substrate-binding protein 7039995 10368497 Psed_6640 Pseudonocardia dioxanivorans CB1190 ABC transporter substrate-binding protein YP_004336581.1 7038949 D 675635 CDS YP_004336582.1 331700343 10368498 7040049..7041536 1 NC_015312.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_3092 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 7041536 10368498 Psed_6641 Pseudonocardia dioxanivorans CB1190 ABC transporter permease YP_004336582.1 7040049 D 675635 CDS YP_004336583.1 331700344 10368499 7041533..7042603 1 NC_015312.1 PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: saq:Sare_1429 ABC transporter related; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 7042603 10368499 Psed_6642 Pseudonocardia dioxanivorans CB1190 Fe(3+)-transporting ATPase YP_004336583.1 7041533 D 675635 CDS YP_004336584.1 331700345 10368500 7042614..7043237 1 NC_015312.1 KEGG: mpa:MAP3642c hypothetical protein; hypothetical protein 7043237 10368500 Psed_6643 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336584.1 7042614 D 675635 CDS YP_004336585.1 331700346 10368501 7043234..7044556 1 NC_015312.1 KEGG: sen:SACE_7247 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase 1; S-adenosylhomocysteine deaminase 7044556 10368501 Psed_6644 Pseudonocardia dioxanivorans CB1190 S-adenosylhomocysteine deaminase YP_004336585.1 7043234 D 675635 CDS YP_004336586.1 331700347 10368502 complement(7044847..7045281) 1 NC_015312.1 hypothetical protein 7045281 10368502 Psed_6645 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336586.1 7044847 R 675635 CDS YP_004336587.1 331700348 10368503 7046291..7047772 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0118; KEGG: amd:AMED_9310 hypothetical protein; hypothetical protein 7047772 10368503 Psed_6646 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336587.1 7046291 D 675635 CDS YP_004336588.1 331700349 10368504 7047866..7048636 1 NC_015312.1 PFAM: Coenzyme A transferase; KEGG: nfa:nfa35190 CoA transferase A subunit; SMART: Coenzyme A transferase; 3-oxoadipate CoA-transferase 7048636 10368504 Psed_6647 Pseudonocardia dioxanivorans CB1190 3-oxoadipate CoA-transferase YP_004336588.1 7047866 D 675635 CDS YP_004336589.1 331700350 10368505 7048633..7049436 1 NC_015312.1 PFAM: Coenzyme A transferase; KEGG: nda:Ndas_2284 coenzyme A transferase; SMART: Coenzyme A transferase; 3-oxoadipate CoA-transferase 7049436 10368505 Psed_6648 Pseudonocardia dioxanivorans CB1190 3-oxoadipate CoA-transferase YP_004336589.1 7048633 D 675635 CDS YP_004336590.1 331700351 10368506 7049433..7050215 1 NC_015312.1 TIGRFAM: 3-oxoadipate enol-lactonase; KEGG: rxy:Rxyl_1578 3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase fold-1; 3-oxoadipate enol-lactonase 7050215 10368506 Psed_6649 Pseudonocardia dioxanivorans CB1190 3-oxoadipate enol-lactonase YP_004336590.1 7049433 D 675635 CDS YP_004336591.1 331700352 10368507 7050409..7050738 1 NC_015312.1 hypothetical protein 7050738 10368507 Psed_6650 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336591.1 7050409 D 675635 CDS YP_004336592.1 331700353 10368508 complement(7050844..7052253) 1 NC_015312.1 TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: svi:Svir_39470 primary replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase 7052253 10368508 Psed_6651 Pseudonocardia dioxanivorans CB1190 replicative DNA helicase YP_004336592.1 7050844 R 675635 CDS YP_004336593.1 331700354 10368509 complement(7052836..7053285) 1 NC_015312.1 TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: saq:Sare_5065 50S ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; 50S ribosomal protein L9 7053285 10368509 Psed_6652 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L9 YP_004336593.1 7052836 R 675635 CDS YP_004336594.1 331700355 10368510 complement(7053300..7053536) 1 NC_015312.1 TIGRFAM: Ribosomal protein S18; HAMAP: Ribosomal protein S18; KEGG: sgr:SGR_3672 30S ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 7053536 10368510 Psed_6653 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S18 YP_004336594.1 7053300 R 675635 CDS YP_004336595.1 331700356 10368511 complement(7053602..7054129) 1 NC_015312.1 KEGG: amd:AMED_9297 single-strand DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 7054129 10368511 Psed_6654 Pseudonocardia dioxanivorans CB1190 single-strand binding protein YP_004336595.1 7053602 R 675635 CDS YP_004336596.1 331700357 10368512 complement(7054140..7054469) 1 NC_015312.1 TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; KEGG: req:REQ_46500 30S ribosomal protein S6 RpsF; PFAM: Ribosomal protein S6; 30S ribosomal protein S6 7054469 10368512 Psed_6655 Pseudonocardia dioxanivorans CB1190 30S ribosomal protein S6 YP_004336596.1 7054140 R 675635 CDS YP_004336597.1 331700358 10368513 7054728..7055498 1 NC_015312.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: ami:Amir_7037 endonuclease IV; SMART: Endodeoxyribonuclease IV; Deoxyribonuclease IV 7055498 10368513 Psed_6656 Pseudonocardia dioxanivorans CB1190 Deoxyribonuclease IV YP_004336597.1 7054728 D 675635 CDS YP_004336598.1 331700359 10368514 7055495..7056916 1 NC_015312.1 KEGG: ami:Amir_7036 integral membrane protein; integral membrane protein 7056916 10368514 Psed_6657 Pseudonocardia dioxanivorans CB1190 integral membrane protein YP_004336598.1 7055495 D 675635 CDS YP_004336599.1 331700360 10368515 complement(7056927..7057556) 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: sen:SACE_3330 NUDIX hydrolase; NUDIX hydrolase 7057556 10368515 Psed_6658 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004336599.1 7056927 R 675635 CDS YP_004336600.1 331700361 10368516 7057631..7058029 1 NC_015312.1 KEGG: nml:Namu_5370 hypothetical protein; hypothetical protein 7058029 10368516 Psed_6659 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336600.1 7057631 D 675635 CDS YP_004336601.1 331700362 10368517 complement(7057965..7059566) 1 NC_015312.1 manually curated; KEGG: svi:Svir_39350 predicted integral membrane protein; hypothetical protein 7059566 10368517 Psed_6660 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336601.1 7057965 R 675635 CDS YP_004336602.1 331700363 10368518 complement(7059582..7061846) 1 NC_015312.1 KEGG: nfa:nfa55570 penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase 7061846 10368518 Psed_6661 Pseudonocardia dioxanivorans CB1190 peptidoglycan glycosyltransferase YP_004336602.1 7059582 R 675635 CDS YP_004336603.1 331700364 10368519 complement(7062165..7062707) 1 NC_015312.1 KEGG: ami:Amir_7033 hypothetical protein; hypothetical protein 7062707 10368519 Psed_6662 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336603.1 7062165 R 675635 CDS YP_004336604.1 331700365 10368520 7062798..7063379 1 NC_015312.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: ami:Amir_7032 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 7063379 10368520 Psed_6663 Pseudonocardia dioxanivorans CB1190 PadR-like family transcriptional regulator YP_004336604.1 7062798 D 675635 CDS YP_004336605.1 331700366 10368521 7063394..7064473 1 NC_015312.1 KEGG: amd:AMED_9284 myo-inositol-1-phosphate synthase; TIGRFAM: Myo-inositol 1-phosphate synthase, actinobacteria; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like; inositol 1-phosphate synthase 7064473 10368521 Psed_6664 Pseudonocardia dioxanivorans CB1190 inositol 1-phosphate synthase YP_004336605.1 7063394 D 675635 CDS YP_004336606.1 331700367 10368522 7064976..7065530 1 NC_015312.1 PFAM: NLP/P60; KEGG: rop:ROP_08530 NlpC/P60 family protein; NLP/P60 protein 7065530 10368522 Psed_6665 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004336606.1 7064976 D 675635 CDS YP_004336607.1 331700368 10368523 7065671..7066417 1 NC_015312.1 PFAM: Uncharacterised protein family UPF0158; KEGG: amd:AMED_5605 hypothetical protein; hypothetical protein 7066417 10368523 Psed_6666 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336607.1 7065671 D 675635 CDS YP_004336608.1 331700369 10368524 7066426..7066848 1 NC_015312.1 PFAM: HEPN; KEGG: tga:TGAM_0259 hypothetical protein; HEPN domain-containing protein 7066848 10368524 Psed_6667 Pseudonocardia dioxanivorans CB1190 HEPN domain-containing protein YP_004336608.1 7066426 D 675635 CDS YP_004336609.1 331700370 10368525 complement(7066866..7069736) 1 NC_015312.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: sen:SACE_7373 leucyl-tRNA synthetase; leucyl-tRNA synthetase 7069736 10368525 Psed_6668 Pseudonocardia dioxanivorans CB1190 leucyl-tRNA synthetase YP_004336609.1 7066866 R 675635 CDS YP_004336610.1 331700371 10368526 7069962..7070417 1 NC_015312.1 KEGG: sen:SACE_7375 hypothetical protein; hypothetical protein 7070417 10368526 Psed_6669 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336610.1 7069962 D 675635 CDS YP_004336611.1 331700372 10368527 complement(7070410..7071015) 1 NC_015312.1 KEGG: ami:Amir_7076 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; hypothetical protein 7071015 10368527 Psed_6670 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336611.1 7070410 R 675635 CDS YP_004336612.1 331700373 10368528 7071051..7072409 1 NC_015312.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_7077 major facilitator superfamily MFS_1; major facilitator superfamily protein 7072409 10368528 Psed_6671 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004336612.1 7071051 D 675635 CDS YP_004336613.1 331700374 10368529 complement(7072416..7074053) 1 NC_015312.1 KEGG: svi:Svir_39600 tRNA adenylyltransferase; TIGRFAM: tRNA adenylyltransferase; Uncharacterised protein family HDIG; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; polynucleotide adenylyltransferase 7074053 10368529 Psed_6672 Pseudonocardia dioxanivorans CB1190 polynucleotide adenylyltransferase YP_004336613.1 7072416 R 675635 CDS YP_004336614.1 331700375 10368530 7074060..7074554 1 NC_015312.1 PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_7080 NUDIX hydrolase; NUDIX hydrolase 7074554 10368530 Psed_6673 Pseudonocardia dioxanivorans CB1190 NUDIX hydrolase YP_004336614.1 7074060 D 675635 CDS YP_004336615.1 331700376 10368531 7074551..7076905 1 NC_015312.1 KEGG: ami:Amir_7081 hypothetical protein; hypothetical protein 7076905 10368531 Psed_6674 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336615.1 7074551 D 675635 CDS YP_004336616.1 331700377 10368532 7077045..7078751 1 NC_015312.1 KEGG: ami:Amir_7083 hypothetical protein; hypothetical protein 7078751 10368532 Psed_6675 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336616.1 7077045 D 675635 CDS YP_004336617.1 331700378 10368533 7078821..7079369 1 NC_015312.1 KEGG: ami:Amir_7084 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 7079369 10368533 Psed_6676 Pseudonocardia dioxanivorans CB1190 ECF subfamily RNA polymerase sigma-24 subunit YP_004336617.1 7078821 D 675635 CDS YP_004336618.1 331700379 10368534 7079369..7081027 1 NC_015312.1 KEGG: tcr:506959.90 hypothetical protein; hypothetical protein 7081027 10368534 Psed_6677 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336618.1 7079369 D 675635 CDS YP_004336619.1 331700380 10368535 7081143..7082141 1 NC_015312.1 TIGRFAM: Thioredoxin reductase; KEGG: sen:SACE_7384 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 7082141 10368535 Psed_6678 Pseudonocardia dioxanivorans CB1190 thioredoxin reductase YP_004336619.1 7081143 D 675635 CDS YP_004336620.1 331700381 10368536 7082231..7082560 1 NC_015312.1 KEGG: rer:RER_60210 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 7082560 10368536 Psed_6679 Pseudonocardia dioxanivorans CB1190 thioredoxin YP_004336620.1 7082231 D 675635 CDS YP_004336621.1 331700382 10368537 7082777..7083943 1 NC_015312.1 KEGG: sen:SACE_7386 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan binding-like; SMART: Cell wall hydrolase/autolysin, catalytic; cell wall hydrolase/autolysin 7083943 10368537 Psed_6680 Pseudonocardia dioxanivorans CB1190 cell wall hydrolase/autolysin YP_004336621.1 7082777 D 675635 CDS YP_004336622.1 331700383 10368538 complement(7083993..7084637) 1 NC_015312.1 KEGG: amd:AMED_9356 hypothetical protein; hypothetical protein 7084637 10368538 Psed_6681 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336622.1 7083993 R 675635 CDS YP_004336623.1 331700384 10368539 7084667..7086172 1 NC_015312.1 KEGG: amd:AMED_9357 aminotransferase AvtA; PFAM: Aminotransferase, class I/classII; GntR family transcriptional regulator 7086172 10368539 Psed_6682 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004336623.1 7084667 D 675635 CDS YP_004336624.1 331700385 10368540 7086225..7087172 1 NC_015312.1 HAMAP: D-alanine--D-alanine ligase; KEGG: ami:Amir_7091 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; D-alanine--D-alanine ligase 7087172 10368540 Psed_6683 Pseudonocardia dioxanivorans CB1190 D-alanine--D-alanine ligase YP_004336624.1 7086225 D 675635 CDS YP_004336625.1 331700386 10368541 7088612..7090258 1 NC_015312.1 KEGG: oaa:100075123 similar to splicing coactivator subunit SRm300; hypothetical protein 7090258 10368541 Psed_6684 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336625.1 7088612 D 675635 CDS YP_004336626.1 331700387 10368542 complement(7090915..7091877) 1 NC_015312.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: ami:Amir_7092 ParB-like partition protein; SMART: ParB-like nuclease; parB-like partition protein 7091877 10368542 Psed_6685 Pseudonocardia dioxanivorans CB1190 parB-like partition protein YP_004336626.1 7090915 R 675635 CDS YP_004336627.1 331700388 10368543 complement(7091881..7092741) 1 NC_015312.1 KEGG: ami:Amir_7093 cobyrinic acid ac-diamide synthase; manually curated; PFAM: Cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 7092741 10368543 Psed_6686 Pseudonocardia dioxanivorans CB1190 Cobyrinic acid ac-diamide synthase YP_004336627.1 7091881 R 675635 CDS YP_004336628.1 331700389 10368544 complement(7092834..7093490) 1 NC_015312.1 TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: svi:Svir_39750 glucose-inhibited division protein B; PFAM: rRNA small subunit methyltransferase G; ribosomal RNA small subunit methyltransferase G 7093490 10368544 Psed_6687 Pseudonocardia dioxanivorans CB1190 ribosomal RNA small subunit methyltransferase G YP_004336628.1 7092834 R 675635 CDS YP_004336629.1 331700390 10368545 complement(7093522..7094046) 1 NC_015312.1 KEGG: sen:SACE_7393 single-stranded nucleic acid binding R3H; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; single-stranded nucleic acid binding R3H domain-containing protein 7094046 10368545 Psed_6688 Pseudonocardia dioxanivorans CB1190 single-stranded nucleic acid binding R3H domain-containing protein YP_004336629.1 7093522 R 675635 CDS YP_004336630.1 331700391 10368546 complement(7094150..7095247) 1 NC_015312.1 KEGG: ami:Amir_7097 60 kDa inner membrane insertion protein; TIGRFAM: Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC; hypothetical protein 7095247 10368546 Psed_6689 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336630.1 7094150 R 675635 CDS YP_004336631.1 331700392 10368547 complement(7095241..7095627) 1 NC_015312.1 TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: ami:Amir_7098 protein of unknown function DUF37; PFAM: Protein of unknown function DUF37; hypothetical protein 7095627 10368547 Psed_6690 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336631.1 7095241 R 675635 CDS YP_004336632.1 331700393 10368548 complement(7095624..7095983) 1 NC_015312.1 TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: svi:Svir_39790 ribonuclease P protein component; PFAM: Ribonuclease P; Ribonuclease P protein component 7095983 10368548 Psed_6691 Pseudonocardia dioxanivorans CB1190 Ribonuclease P protein component YP_004336632.1 7095624 R 675635 CDS YP_004336633.1 331700394 10368549 complement(7095996..7096139) 1 NC_015312.1 TIGRFAM: Ribosomal protein L34; HAMAP: Ribosomal protein L34; KEGG: cpu:cpfrc_02110 50S ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 7096139 10368549 Psed_6692 Pseudonocardia dioxanivorans CB1190 50S ribosomal protein L34 YP_004336633.1 7095996 R 675635 CDS YP_004336634.1 327309735 10361801 complement(1620..4226) 1 NC_015313.1 TIGRFAM: DNA primase, phage/plasmid; PFAM: Phage/plasmid primase, P4, C-terminal; KEGG: afl:Aflv_0784 phage associated DNA primase; SMART: Phage/plasmid primase, P4, C-terminal; P4 family phage/plasmid primase 4226 10361801 Psed_7012 Pseudonocardia dioxanivorans CB1190 P4 family phage/plasmid primase YP_004336634.1 1620 R 675635 CDS YP_004336635.1 327309736 10361788 complement(4518..5090) 1 NC_015313.1 hypothetical protein 5090 10361788 Psed_7013 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336635.1 4518 R 675635 CDS YP_004336636.1 327309737 10361789 complement(5506..5745) 1 NC_015313.1 hypothetical protein 5745 10361789 Psed_7014 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336636.1 5506 R 675635 CDS YP_004336637.1 327309738 10361790 complement(5745..5930) 1 NC_015313.1 hypothetical protein 5930 10361790 Psed_7015 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336637.1 5745 R 675635 CDS YP_004336638.1 327309739 10361791 complement(5927..6313) 1 NC_015313.1 hypothetical protein 6313 10361791 Psed_7016 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336638.1 5927 R 675635 CDS YP_004336639.1 327309740 10361792 complement(6319..6552) 1 NC_015313.1 hypothetical protein 6552 10361792 Psed_7017 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336639.1 6319 R 675635 CDS YP_004336640.1 327309741 10361793 6895..7506 1 NC_015313.1 KEGG: cms:CMS_pCSL0098 putative partitioning protein ParA; putative partitioning protein ParA 7506 10361793 Psed_7018 Pseudonocardia dioxanivorans CB1190 putative partitioning protein ParA YP_004336640.1 6895 D 675635 CDS YP_004336641.1 327309742 10361794 7496..7951 1 NC_015313.1 hypothetical protein 7951 10361794 Psed_7019 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336641.1 7496 D 675635 CDS YP_004336642.1 327309743 10361795 8035..8874 1 NC_015313.1 KEGG: sma:SAV_2075 hypothetical protein; hypothetical protein 8874 10361795 Psed_7020 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336642.1 8035 D 675635 CDS YP_004336643.1 327309744 10361796 8976..9425 1 NC_015313.1 hypothetical protein 9425 10361796 Psed_7021 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336643.1 8976 D 675635 CDS YP_004336644.1 327309745 10361797 9425..11407 1 NC_015313.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: mil:ML5_1658 hypothetical protein; cell division protein FtsK/SpoIIIE 11407 10361797 Psed_7022 Pseudonocardia dioxanivorans CB1190 cell division protein FtsK/SpoIIIE YP_004336644.1 9425 D 675635 CDS YP_004336645.1 327309746 10361798 12024..12938 1 NC_015313.1 hypothetical protein 12938 10361798 Psed_7023 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336645.1 12024 D 675635 CDS YP_004336646.1 327309747 10361799 12935..13573 1 NC_015313.1 hypothetical protein 13573 10361799 Psed_7024 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336646.1 12935 D 675635 CDS YP_004336647.1 327309748 10361800 13607..13912 1 NC_015313.1 hypothetical protein 13912 10361800 Psed_7025 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336647.1 13607 D 675635 CDS YP_004336648.1 327309750 10359556 302..601 1 NC_015314.1 hypothetical protein 601 10359556 Psed_6693 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336648.1 302 D 675635 CDS YP_004336649.1 327309751 10359365 737..2170 1 NC_015314.1 hypothetical protein 2170 10359365 Psed_6694 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336649.1 737 D 675635 CDS YP_004336650.1 327309752 10359537 3940..4443 1 NC_015314.1 KEGG: cai:Caci_6923 hypothetical protein; hypothetical protein 4443 10359537 Psed_6696 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336650.1 3940 D 675635 CDS YP_004336651.1 327309753 10359367 4609..5208 1 NC_015314.1 PFAM: IstB-like ATP-binding protein; KEGG: tpr:Tpau_1025 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 5208 10359367 Psed_6697 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004336651.1 4609 D 675635 CDS YP_004336652.1 327309754 10359368 complement(5164..7002) 1 NC_015314.1 PFAM: Polysaccharide biosynthesis protein; KEGG: rop:ROP_57940 putative polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 7002 10359368 Psed_6698 Pseudonocardia dioxanivorans CB1190 polysaccharide biosynthesis protein YP_004336652.1 5164 R 675635 CDS YP_004336653.1 327309755 10359369 complement(7142..7786) 1 NC_015314.1 PFAM: Methyltransferase type 11; KEGG: sfu:Sfum_3434 methyltransferase type 11; Methyltransferase type 11 7786 10359369 Psed_6699 Pseudonocardia dioxanivorans CB1190 Methyltransferase type 11 YP_004336653.1 7142 R 675635 CDS YP_004336654.1 327309756 10359539 complement(11592..12467) 1 NC_015314.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nfa:pnf220 putative chromosome partitioning protein; SMART: ParB-like nuclease; parB-like partition protein 12467 10359539 Psed_6702 Pseudonocardia dioxanivorans CB1190 parB-like partition protein YP_004336654.1 11592 R 675635 CDS YP_004336655.1 327309757 10359371 complement(12471..13208) 1 NC_015314.1 KEGG: mkm:Mkms_5580 putative plasmid partitioning protein; putative plasmid partitioning protein 13208 10359371 Psed_6703 Pseudonocardia dioxanivorans CB1190 putative plasmid partitioning protein YP_004336655.1 12471 R 675635 CDS YP_004336656.1 327309758 10359372 complement(14423..15598) 1 NC_015314.1 PFAM: Integrase, catalytic core; KEGG: nml:Namu_3083 integrase catalytic subunit; integrase catalytic subunit 15598 10359372 Psed_6704 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336656.1 14423 R 675635 CDS YP_004336657.1 327309759 10359373 complement(16211..17287) 1 NC_015314.1 hypothetical protein 17287 10359373 Psed_6705 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336657.1 16211 R 675635 CDS YP_004336658.1 327309760 10359374 18250..18591 1 NC_015314.1 hypothetical protein 18591 10359374 Psed_6706 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336658.1 18250 D 675635 CDS YP_004336659.1 327309761 10359375 18711..21914 1 NC_015314.1 PFAM: Transposase, Tn3; KEGG: sro:Sros_4723 transposase, Tn3 family; transposase Tn3 family protein 21914 10359375 Psed_6707 Pseudonocardia dioxanivorans CB1190 transposase Tn3 family protein YP_004336659.1 18711 D 675635 CDS YP_004336660.1 327309762 10359540 23420..24697 1 NC_015314.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 24697 10359540 Psed_6709 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004336660.1 23420 D 675635 CDS YP_004336661.1 327309763 10359377 complement(24802..25524) 1 NC_015314.1 PFAM: Cation efflux protein; KEGG: sco:SCO3521 integral membrane protein; cation efflux protein 25524 10359377 Psed_6710 Pseudonocardia dioxanivorans CB1190 cation efflux protein YP_004336661.1 24802 R 675635 CDS YP_004336662.1 327309764 10359378 complement(25526..25876) 1 NC_015314.1 KEGG: sco:SCO3522 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 25876 10359378 Psed_6711 Pseudonocardia dioxanivorans CB1190 regulatory protein ArsR YP_004336662.1 25526 R 675635 CDS YP_004336663.1 327309765 10359379 26054..26722 1 NC_015314.1 KEGG: fra:Francci3_2363 resolvase-like protein; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal; Resolvase domain-containing protein 26722 10359379 Psed_6712 Pseudonocardia dioxanivorans CB1190 Resolvase domain-containing protein YP_004336663.1 26054 D 675635 CDS YP_004336664.1 327309766 10359380 complement(26906..28183) 1 NC_015314.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 28183 10359380 Psed_6713 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004336664.1 26906 R 675635 CDS YP_004336665.1 327309767 10359541 complement(28787..30163) 1 NC_015314.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: hla:Hlac_2992 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 30163 10359541 Psed_6715 Pseudonocardia dioxanivorans CB1190 dihydrolipoamide dehydrogenase YP_004336665.1 28787 R 675635 CDS YP_004336666.1 327309768 10359382 complement(30211..30561) 1 NC_015314.1 hypothetical protein 30561 10359382 Psed_6716 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336666.1 30211 R 675635 CDS YP_004336667.1 327309769 10359383 complement(30686..31321) 1 NC_015314.1 KEGG: sgr:SGR_6027 putative integral membrane protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; Vitamin K epoxide reductase 31321 10359383 Psed_6717 Pseudonocardia dioxanivorans CB1190 Vitamin K epoxide reductase YP_004336667.1 30686 R 675635 CDS YP_004336668.1 327309770 10359384 complement(31403..32362) 1 NC_015314.1 PFAM: Cytochrome c assembly protein, transmembrane domain; KEGG: msp:Mspyr1_25040 cytochrome c biogenesis protein; cytochrome c biogenesis protein transmembrane region 32362 10359384 Psed_6718 Pseudonocardia dioxanivorans CB1190 cytochrome c biogenesis protein transmembrane region YP_004336668.1 31403 R 675635 CDS YP_004336669.1 327309771 10359385 complement(32362..32928) 1 NC_015314.1 PFAM: Redoxin; KEGG: mgi:Mflv_3216 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; Redoxin domain-containing protein 32928 10359385 Psed_6719 Pseudonocardia dioxanivorans CB1190 Redoxin domain-containing protein YP_004336669.1 32362 R 675635 CDS YP_004336670.1 327309772 10359386 complement(33051..33350) 1 NC_015314.1 KEGG: ach:Achl_4522 hypothetical protein; hypothetical protein 33350 10359386 Psed_6720 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336670.1 33051 R 675635 CDS YP_004336671.1 327309773 10359387 complement(33347..33724) 1 NC_015314.1 KEGG: gbr:Gbro_2650 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; transcriptional regulator, ArsR family 33724 10359387 Psed_6721 Pseudonocardia dioxanivorans CB1190 transcriptional regulator, ArsR family YP_004336671.1 33347 R 675635 CDS YP_004336672.1 327309774 10359388 33851..35275 1 NC_015314.1 TIGRFAM: Mercury reductase, MerA; KEGG: mil:ML5_4212 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mercuric reductase 35275 10359388 Psed_6722 Pseudonocardia dioxanivorans CB1190 mercuric reductase YP_004336672.1 33851 D 675635 CDS YP_004336673.1 327309775 10359543 36584..36748 1 NC_015314.1 hypothetical protein 36748 10359543 Psed_6725 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336673.1 36584 D 675635 CDS YP_004336674.1 327309776 10359390 complement(36981..38048) 1 NC_015314.1 PFAM: Integrase, catalytic core, phage; KEGG: fal:FRAAL3720 putative integrase; integrase family protein 38048 10359390 Psed_6726 Pseudonocardia dioxanivorans CB1190 integrase family protein YP_004336674.1 36981 R 675635 CDS YP_004336675.1 327309777 10359391 38262..39020 1 NC_015314.1 KEGG: mkm:Mkms_5581 hypothetical protein; hypothetical protein 39020 10359391 Psed_6727 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336675.1 38262 D 675635 CDS YP_004336676.1 327309778 10359392 complement(39588..41003) 1 NC_015314.1 PFAM: Amidase; KEGG: sro:Sros_0559 amidase; Amidase 41003 10359392 Psed_6728 Pseudonocardia dioxanivorans CB1190 Amidase YP_004336676.1 39588 R 675635 CDS YP_004336677.1 327309779 10359393 complement(41000..41257) 1 NC_015314.1 hypothetical protein 41257 10359393 Psed_6729 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336677.1 41000 R 675635 CDS YP_004336678.1 327309780 10359394 41502..42545 1 NC_015314.1 PFAM: Luciferase-like, subgroup; KEGG: yen:YE1950 alkanesulfonate monooxygenase; Luciferase-like, subgroup 42545 10359394 Psed_6730 Pseudonocardia dioxanivorans CB1190 Luciferase-like, subgroup YP_004336678.1 41502 D 675635 CDS YP_004336679.1 327309781 10359395 complement(42585..43349) 1 NC_015314.1 KEGG: nca:Noca_4063 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR domain-containing protein 43349 10359395 Psed_6731 Pseudonocardia dioxanivorans CB1190 GntR domain-containing protein YP_004336679.1 42585 R 675635 CDS YP_004336680.1 327309782 10359396 43490..44029 1 NC_015314.1 PFAM: MaoC-like dehydratase; KEGG: nca:Noca_4064 dehydratase; MaoC domain-containing protein dehydratase 44029 10359396 Psed_6732 Pseudonocardia dioxanivorans CB1190 MaoC domain-containing protein dehydratase YP_004336680.1 43490 D 675635 CDS YP_004336681.1 327309783 10359397 44026..45246 1 NC_015314.1 KEGG: sro:Sros_6624 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Formyl-CoA transferase 45246 10359397 Psed_6733 Pseudonocardia dioxanivorans CB1190 Formyl-CoA transferase YP_004336681.1 44026 D 675635 CDS YP_004336682.1 327309784 10359398 45248..46411 1 NC_015314.1 KEGG: nca:Noca_4073 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Butyryl-CoA dehydrogenase 46411 10359398 Psed_6734 Pseudonocardia dioxanivorans CB1190 Butyryl-CoA dehydrogenase YP_004336682.1 45248 D 675635 CDS YP_004336683.1 327309785 10359399 46408..47064 1 NC_015314.1 KEGG: amd:AMED_6293 TrpR binding protein WrbA; TIGRFAM: Flavoprotein WrbA; PFAM: Flavodoxin/nitric oxide synthase; flavoprotein WrbA 47064 10359399 Psed_6735 Pseudonocardia dioxanivorans CB1190 flavoprotein WrbA YP_004336683.1 46408 D 675635 CDS YP_004336684.1 327309786 10359400 47061..48668 1 NC_015314.1 PFAM: Amidase; KEGG: nfa:nfa12060 putative amidase; Amidase 48668 10359400 Psed_6736 Pseudonocardia dioxanivorans CB1190 Amidase YP_004336684.1 47061 D 675635 CDS YP_004336685.1 327309787 10359401 48646..49464 1 NC_015314.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sli:Slin_1265 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 49464 10359401 Psed_6737 Pseudonocardia dioxanivorans CB1190 alpha/beta hydrolase fold protein YP_004336685.1 48646 D 675635 CDS YP_004336686.1 327309788 10359402 49550..50944 1 NC_015314.1 PFAM: MmgE/PrpD; KEGG: bxe:Bxe_A4086 hypothetical protein; MmgE/PrpD family protein 50944 10359402 Psed_6738 Pseudonocardia dioxanivorans CB1190 MmgE/PrpD family protein YP_004336686.1 49550 D 675635 CDS YP_004336687.1 327309789 10359403 50934..51479 1 NC_015314.1 manually curated; PFAM: Flavin reductase-like, FMN-binding; KEGG: fre:Franean1_4843 flavin reductase domain-containing protein; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing protein FMN-binding protein 51479 10359403 Psed_6739 Pseudonocardia dioxanivorans CB1190 flavin reductase domain-containing protein FMN-binding protein YP_004336687.1 50934 D 675635 CDS YP_004336688.1 327309790 10359404 complement(51999..52412) 1 NC_015314.1 KEGG: svi:Svir_17410 hypothetical protein; hypothetical protein 52412 10359404 Psed_6740 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336688.1 51999 R 675635 CDS YP_004336689.1 327309791 10359405 complement(52651..54531) 1 NC_015314.1 KEGG: rcu:RCOM_2060150 hypothetical protein; hypothetical protein 54531 10359405 Psed_6741 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336689.1 52651 R 675635 CDS YP_004336690.1 327309792 10359406 complement(54528..55685) 1 NC_015314.1 PFAM: NLP/P60; KEGG: mil:ML5_6031 nlp/p60 protein; NLP/P60 protein 55685 10359406 Psed_6742 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004336690.1 54528 R 675635 CDS YP_004336691.1 327309793 10359407 complement(55761..56531) 1 NC_015314.1 KEGG: sro:Sros_1963 hypothetical protein; hypothetical protein 56531 10359407 Psed_6743 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336691.1 55761 R 675635 CDS YP_004336692.1 327309794 10359408 complement(56803..58251) 1 NC_015314.1 KEGG: scl:sce6360 hypothetical protein; hypothetical protein 58251 10359408 Psed_6744 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336692.1 56803 R 675635 CDS YP_004336693.1 327309795 10359409 complement(58248..59921) 1 NC_015314.1 KEGG: gob:Gobs_0687 ATP-binding protein; ATP-binding protein 59921 10359409 Psed_6745 Pseudonocardia dioxanivorans CB1190 ATP-binding protein YP_004336693.1 58248 R 675635 CDS YP_004336694.1 327309796 10359410 complement(59921..61471) 1 NC_015314.1 KEGG: gob:Gobs_0686 hypothetical protein; hypothetical protein 61471 10359410 Psed_6746 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336694.1 59921 R 675635 CDS YP_004336695.1 327309797 10359411 complement(61468..62961) 1 NC_015314.1 KEGG: gob:Gobs_0685 hypothetical protein; hypothetical protein 62961 10359411 Psed_6747 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336695.1 61468 R 675635 CDS YP_004336696.1 327309798 10359412 complement(62961..63848) 1 NC_015314.1 KEGG: gob:Gobs_0684 hypothetical protein; hypothetical protein 63848 10359412 Psed_6748 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336696.1 62961 R 675635 CDS YP_004336697.1 327309799 10359413 complement(63864..64181) 1 NC_015314.1 hypothetical protein 64181 10359413 Psed_6749 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336697.1 63864 R 675635 CDS YP_004336698.1 327309800 10359414 complement(64178..65161) 1 NC_015314.1 KEGG: nca:Noca_4716 hypothetical protein; hypothetical protein 65161 10359414 Psed_6750 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336698.1 64178 R 675635 CDS YP_004336699.1 327309801 10359415 complement(65221..67107) 1 NC_015314.1 PFAM: Transglycosylase-like; KEGG: zro:ZYRO0F02728g hypothetical protein; Transglycosylase-like domain-containing protein 67107 10359415 Psed_6751 Pseudonocardia dioxanivorans CB1190 Transglycosylase-like domain-containing protein YP_004336699.1 65221 R 675635 CDS YP_004336700.1 327309802 10359416 complement(67110..67202) 1 NC_015314.1 hypothetical protein 67202 10359416 Psed_6752 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336700.1 67110 R 675635 CDS YP_004336701.1 327309803 10359417 complement(67199..68545) 1 NC_015314.1 KEGG: mgi:Mflv_1504 hypothetical protein; hypothetical protein 68545 10359417 Psed_6753 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336701.1 67199 R 675635 CDS YP_004336702.1 327309804 10359418 complement(68549..70267) 1 NC_015314.1 KEGG: mab:MAB_0630 hypothetical protein; hypothetical protein 70267 10359418 Psed_6754 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336702.1 68549 R 675635 CDS YP_004336703.1 327309805 10359419 complement(70264..71061) 1 NC_015314.1 hypothetical protein 71061 10359419 Psed_6755 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336703.1 70264 R 675635 CDS YP_004336704.1 327309806 10359420 71679..72296 1 NC_015314.1 hypothetical protein 72296 10359420 Psed_6756 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336704.1 71679 D 675635 CDS YP_004336705.1 327309807 10359421 72337..73485 1 NC_015314.1 KEGG: esc:Entcl_2744 cell wall surface anchor family protein; hypothetical protein 73485 10359421 Psed_6757 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336705.1 72337 D 675635 CDS YP_004336706.1 327309808 10359422 73550..74164 1 NC_015314.1 KEGG: stp:Strop_4198 hypothetical protein; hypothetical protein 74164 10359422 Psed_6758 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336706.1 73550 D 675635 CDS YP_004336707.1 327309809 10359423 complement(74185..74610) 1 NC_015314.1 KEGG: hsa:4583 mucin 2, oligomeric mucus/gel-forming; hypothetical protein 74610 10359423 Psed_6759 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336707.1 74185 R 675635 CDS YP_004336708.1 327309810 10359424 complement(74812..75063) 1 NC_015314.1 hypothetical protein 75063 10359424 Psed_6760 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336708.1 74812 R 675635 CDS YP_004336709.1 327309811 10359425 complement(75085..76581) 1 NC_015314.1 KEGG: tpr:Tpau_3922 hypothetical protein; hypothetical protein 76581 10359425 Psed_6761 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336709.1 75085 R 675635 CDS YP_004336710.1 327309812 10359426 76948..77475 1 NC_015314.1 KEGG: amd:AMED_1799 hypothetical protein; hypothetical protein 77475 10359426 Psed_6762 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336710.1 76948 D 675635 CDS YP_004336711.1 327309813 10359427 complement(77629..77817) 1 NC_015314.1 hypothetical protein 77817 10359427 Psed_6763 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336711.1 77629 R 675635 CDS YP_004336712.1 327309814 10359428 78262..78477 1 NC_015314.1 hypothetical protein 78477 10359428 Psed_6764 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336712.1 78262 D 675635 CDS YP_004336713.1 327309815 10359429 78549..79406 1 NC_015314.1 KEGG: ade:Adeh_1681 PE-PGRS family protein; hypothetical protein 79406 10359429 Psed_6765 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336713.1 78549 D 675635 CDS YP_004336714.1 327309816 10359430 complement(79311..79763) 1 NC_015314.1 hypothetical protein 79763 10359430 Psed_6766 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336714.1 79311 R 675635 CDS YP_004336715.1 327309817 10359544 80358..80990 1 NC_015314.1 KEGG: bbr:BB1120 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 80990 10359544 Psed_6768 Pseudonocardia dioxanivorans CB1190 two component transcriptional regulator, LuxR family YP_004336715.1 80358 D 675635 CDS YP_004336716.1 327309818 10359432 complement(81139..82221) 1 NC_015314.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-4; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; KEGG: bbr:BB1122 two-component system sensor kinase; SMART: ATPase-like, ATP-binding domain; PAS; PAS/PAC sensor signal transduction histidine kinase 82221 10359432 Psed_6769 Pseudonocardia dioxanivorans CB1190 PAS/PAC sensor signal transduction histidine kinase YP_004336716.1 81139 R 675635 CDS YP_004336717.1 327309819 10359433 82353..84128 1 NC_015314.1 KEGG: bbr:BB1126 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Butyryl-CoA dehydrogenase 84128 10359433 Psed_6770 Pseudonocardia dioxanivorans CB1190 Butyryl-CoA dehydrogenase YP_004336717.1 82353 D 675635 CDS YP_004336718.1 327309820 10359434 84171..84950 1 NC_015314.1 KEGG: cti:RALTA_A1472 gluconate 5-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase 84950 10359434 Psed_6771 Pseudonocardia dioxanivorans CB1190 3-oxoacyl-(acyl-carrier-protein) reductase YP_004336718.1 84171 D 675635 CDS YP_004336719.1 327309821 10359435 84989..85774 1 NC_015314.1 PFAM: Crotonase, core; KEGG: bbr:BB1123 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 85774 10359435 Psed_6772 Pseudonocardia dioxanivorans CB1190 Enoyl-CoA hydratase/isomerase YP_004336719.1 84989 D 675635 CDS YP_004336720.1 327309822 10359436 85797..87908 1 NC_015314.1 KEGG: rme:Rmet_5110 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxybutyryl-CoA epimerase 87908 10359436 Psed_6773 Pseudonocardia dioxanivorans CB1190 3-hydroxybutyryl-CoA epimerase YP_004336720.1 85797 D 675635 CDS YP_004336721.1 327309823 10359437 87993..89345 1 NC_015314.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rer:RER_51930 MFS transporter; major facilitator superfamily protein 89345 10359437 Psed_6774 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004336721.1 87993 D 675635 CDS YP_004336722.1 327309824 10359438 89342..89794 1 NC_015314.1 KEGG: tcu:Tcur_1474 enoyl-CoA hydratase; PFAM: MaoC-like dehydratase; Enoyl-CoA hydratase 89794 10359438 Psed_6775 Pseudonocardia dioxanivorans CB1190 Enoyl-CoA hydratase YP_004336722.1 89342 D 675635 CDS YP_004336723.1 327309825 10359439 89815..91722 1 NC_015314.1 KEGG: bbr:BB1125 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase; Long-chain-fatty-acid--CoA ligase 91722 10359439 Psed_6776 Pseudonocardia dioxanivorans CB1190 Long-chain-fatty-acid--CoA ligase YP_004336723.1 89815 D 675635 CDS YP_004336724.1 327309826 10359440 91839..93062 1 NC_015314.1 TIGRFAM: Thiolase; KEGG: tbi:Tbis_3121 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 93062 10359440 Psed_6777 Pseudonocardia dioxanivorans CB1190 acetyl-CoA acetyltransferase YP_004336724.1 91839 D 675635 CDS YP_004336725.1 327309827 10359441 93251..93541 1 NC_015314.1 PFAM: Transposase IS3/IS911family; KEGG: mva:Mvan_2521 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 93541 10359441 Psed_6778 Pseudonocardia dioxanivorans CB1190 transposase IS3/IS911 family protein YP_004336725.1 93251 D 675635 CDS YP_004336726.1 327309828 10359442 93538..94428 1 NC_015314.1 PFAM: Integrase, catalytic core; KEGG: mva:Mvan_2522 integrase catalytic subunit; integrase catalytic subunit 94428 10359442 Psed_6779 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336726.1 93538 D 675635 CDS YP_004336727.1 327309829 10359443 94533..94709 1 NC_015314.1 hypothetical protein 94709 10359443 Psed_6780 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336727.1 94533 D 675635 CDS YP_004336728.1 327309830 10359545 complement(95456..96754) 1 NC_015314.1 KEGG: tbi:Tbis_2163 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Hydroxyacid-oxoacid transhydrogenase 96754 10359545 Psed_6782 Pseudonocardia dioxanivorans CB1190 Hydroxyacid-oxoacid transhydrogenase YP_004336728.1 95456 R 675635 CDS YP_004336729.1 327309831 10359546 complement(98121..99746) 1 NC_015314.1 KEGG: mbt:JTY_3127 putative alkyldihydroxyacetonephosphate synthase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Alkylglycerone-phosphate synthase 99746 10359546 Psed_6784 Pseudonocardia dioxanivorans CB1190 Alkylglycerone-phosphate synthase YP_004336729.1 98121 R 675635 CDS YP_004336730.1 327309832 10359547 complement(101357..102130) 1 NC_015314.1 manually curated; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; KEGG: sen:SACE_3508 GntR family transcriptional regulator; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR domain-containing protein 102130 10359547 Psed_6786 Pseudonocardia dioxanivorans CB1190 GntR domain-containing protein YP_004336730.1 101357 R 675635 CDS YP_004336731.1 327309833 10359447 102237..103358 1 NC_015314.1 manually curated; KEGG: cai:Caci_8461 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Formyl-CoA transferase 103358 10359447 Psed_6787 Pseudonocardia dioxanivorans CB1190 Formyl-CoA transferase YP_004336731.1 102237 D 675635 CDS YP_004336732.1 327309834 10359448 103878..104399 1 NC_015314.1 manually curated; KEGG: svi:Svir_18170 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase 104399 10359448 Psed_6788 Pseudonocardia dioxanivorans CB1190 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase YP_004336732.1 103878 D 675635 CDS YP_004336733.1 327309835 10359548 complement(105441..105689) 1 NC_015314.1 KEGG: cai:Caci_3926 hypothetical protein; hypothetical protein 105689 10359548 Psed_6790 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336733.1 105441 R 675635 CDS YP_004336734.1 327309836 10359450 complement(105787..106713) 1 NC_015314.1 KEGG: art:Arth_0469 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 106713 10359450 Psed_6791 Pseudonocardia dioxanivorans CB1190 IstB domain-containing protein ATP-binding protein YP_004336734.1 105787 R 675635 CDS YP_004336735.1 327309837 10359451 107794..108801 1 NC_015314.1 hypothetical protein 108801 10359451 Psed_6792 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336735.1 107794 D 675635 CDS YP_004336736.1 327309838 10359452 complement(109021..110250) 1 NC_015314.1 KEGG: rha:RHA1_ro08154 dehydratase/racemase; PFAM: CoA-transferase family III; Formyl-CoA transferase 110250 10359452 Psed_6793 Pseudonocardia dioxanivorans CB1190 Formyl-CoA transferase YP_004336736.1 109021 R 675635 CDS YP_004336737.1 327309839 10359453 complement(110247..111305) 1 NC_015314.1 PFAM: Crotonase, core; KEGG: mul:MUL_0536 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 111305 10359453 Psed_6794 Pseudonocardia dioxanivorans CB1190 Enoyl-CoA hydratase/isomerase YP_004336737.1 110247 R 675635 CDS YP_004336738.1 327309840 10359552 complement(114672..116084) 1 NC_015314.1 PFAM: Transposase, IS4-like; KEGG: mau:Micau_5192 transposase IS4 family protein; transposase IS4 family protein 116084 10359552 Psed_6799 Pseudonocardia dioxanivorans CB1190 transposase IS4 family protein YP_004336738.1 114672 R 675635 CDS YP_004336739.1 327309841 10359455 116326..117927 1 NC_015314.1 KEGG: saq:Sare_3350 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Alkylglycerone-phosphate synthase 117927 10359455 Psed_6800 Pseudonocardia dioxanivorans CB1190 Alkylglycerone-phosphate synthase YP_004336739.1 116326 D 675635 CDS YP_004336740.1 327309842 10359553 complement(118999..120012) 1 NC_015314.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: fri:FraEuI1c_6427 integrase family protein; integrase family protein 120012 10359553 Psed_6802 Pseudonocardia dioxanivorans CB1190 integrase family protein YP_004336740.1 118999 R 675635 CDS YP_004336741.1 327309843 10359457 complement(120009..120377) 1 NC_015314.1 hypothetical protein 120377 10359457 Psed_6803 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336741.1 120009 R 675635 CDS YP_004336742.1 327309844 10359458 complement(120370..121026) 1 NC_015314.1 hypothetical protein 121026 10359458 Psed_6804 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336742.1 120370 R 675635 CDS YP_004336743.1 327309845 10359459 122512..122898 1 NC_015314.1 hypothetical protein 122898 10359459 Psed_6805 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336743.1 122512 D 675635 CDS YP_004336744.1 327309846 10359460 complement(123284..123547) 1 NC_015314.1 hypothetical protein 123547 10359460 Psed_6806 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336744.1 123284 R 675635 CDS YP_004336745.1 327309847 10359461 123861..124661 1 NC_015314.1 hypothetical protein 124661 10359461 Psed_6807 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336745.1 123861 D 675635 CDS YP_004336746.1 327309848 10359462 complement(124693..125232) 1 NC_015314.1 KEGG: amd:AMED_0080 hypothetical protein; hypothetical protein 125232 10359462 Psed_6808 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336746.1 124693 R 675635 CDS YP_004336747.1 327309849 10359463 complement(125249..126571) 1 NC_015314.1 PFAM: Protein of unknown function DUF1173; KEGG: sna:Snas_5425 hypothetical protein; hypothetical protein 126571 10359463 Psed_6809 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336747.1 125249 R 675635 CDS YP_004336748.1 327309850 10359464 complement(126577..127470) 1 NC_015314.1 hypothetical protein 127470 10359464 Psed_6810 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336748.1 126577 R 675635 CDS YP_004336749.1 327309851 10359465 complement(127507..129594) 1 NC_015314.1 KEGG: kfl:Kfla_2184 type IV secretory pathway VirD4 protein-like protein; type IV secretory pathway VirD4 protein-like protein 129594 10359465 Psed_6811 Pseudonocardia dioxanivorans CB1190 type IV secretory pathway VirD4 protein-like protein YP_004336749.1 127507 R 675635 CDS YP_004336750.1 327309852 10359466 complement(129591..130562) 1 NC_015314.1 KEGG: kfl:Kfla_0387 hypothetical protein; hypothetical protein 130562 10359466 Psed_6812 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336750.1 129591 R 675635 CDS YP_004336751.1 327309853 10359467 complement(130549..131004) 1 NC_015314.1 hypothetical protein 131004 10359467 Psed_6813 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336751.1 130549 R 675635 CDS YP_004336752.1 327309854 10359468 131243..131560 1 NC_015314.1 hypothetical protein 131560 10359468 Psed_6814 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336752.1 131243 D 675635 CDS YP_004336753.1 327309855 10359469 131557..132138 1 NC_015314.1 KEGG: tcu:Tcur_0423 hypothetical protein; hypothetical protein 132138 10359469 Psed_6815 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336753.1 131557 D 675635 CDS YP_004336754.1 327309856 10359470 132158..133021 1 NC_015314.1 KEGG: scb:SCAB_57051 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 133021 10359470 Psed_6816 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004336754.1 132158 D 675635 CDS YP_004336755.1 327309857 10359471 complement(133112..133411) 1 NC_015314.1 hypothetical protein 133411 10359471 Psed_6817 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336755.1 133112 R 675635 CDS YP_004336756.1 327309858 10359472 complement(133411..133695) 1 NC_015314.1 hypothetical protein 133695 10359472 Psed_6818 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336756.1 133411 R 675635 CDS YP_004336757.1 327309859 10359473 complement(133816..134220) 1 NC_015314.1 hypothetical protein 134220 10359473 Psed_6819 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336757.1 133816 R 675635 CDS YP_004336758.1 327309860 10359474 134642..135556 1 NC_015314.1 KEGG: ami:Amir_1461 hypothetical protein; hypothetical protein 135556 10359474 Psed_6820 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336758.1 134642 D 675635 CDS YP_004336759.1 327309861 10359475 136179..137309 1 NC_015314.1 KEGG: cmi:pCM2_0003 hypothetical protein; hypothetical protein 137309 10359475 Psed_6821 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336759.1 136179 D 675635 CDS YP_004336760.1 327309862 10359476 137306..138064 1 NC_015314.1 hypothetical protein 138064 10359476 Psed_6822 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336760.1 137306 D 675635 CDS YP_004336761.1 327309863 10359477 138159..138926 1 NC_015314.1 hypothetical protein 138926 10359477 Psed_6823 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336761.1 138159 D 675635 CDS YP_004336762.1 327309864 10359478 138923..139693 1 NC_015314.1 hypothetical protein 139693 10359478 Psed_6824 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336762.1 138923 D 675635 CDS YP_004336763.1 327309865 10359479 139997..141619 1 NC_015314.1 KEGG: fre:Franean1_1320 nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; ParB domain-containing protein nuclease 141619 10359479 Psed_6825 Pseudonocardia dioxanivorans CB1190 ParB domain-containing protein nuclease YP_004336763.1 139997 D 675635 CDS YP_004336764.1 327309866 10359480 141694..142134 1 NC_015314.1 hypothetical protein 142134 10359480 Psed_6826 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336764.1 141694 D 675635 CDS YP_004336765.1 327309867 10359481 142334..142837 1 NC_015314.1 hypothetical protein 142837 10359481 Psed_6827 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336765.1 142334 D 675635 CDS YP_004336766.1 327309868 10359482 143084..143503 1 NC_015314.1 KEGG: art:Arth_4330 hypothetical protein; hypothetical protein 143503 10359482 Psed_6828 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336766.1 143084 D 675635 CDS YP_004336767.1 327309869 10359483 143564..144136 1 NC_015314.1 KEGG: ach:Achl_3985 hypothetical protein; hypothetical protein 144136 10359483 Psed_6829 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336767.1 143564 D 675635 CDS YP_004336768.1 327309870 10359484 144212..144835 1 NC_015314.1 KEGG: pth:PTH_2463 hypothetical protein; hypothetical protein 144835 10359484 Psed_6830 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336768.1 144212 D 675635 CDS YP_004336769.1 327309871 10359485 145154..145567 1 NC_015314.1 PFAM: Primosome PriB/single-strand DNA-binding; KEGG: dge:Dgeo_0165 single-strand binding protein; single-strand binding protein/Primosomal replication protein n 145567 10359485 Psed_6831 Pseudonocardia dioxanivorans CB1190 single-strand binding protein/Primosomal replication protein n YP_004336769.1 145154 D 675635 CDS YP_004336770.1 327309872 10359486 145687..146064 1 NC_015314.1 PFAM: Transcription factor WhiB; KEGG: mil:ML5_3052 transcription factor WhiB; transcription factor WhiB 146064 10359486 Psed_6832 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004336770.1 145687 D 675635 CDS YP_004336771.1 327309873 10359487 146212..146802 1 NC_015314.1 hypothetical protein 146802 10359487 Psed_6833 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336771.1 146212 D 675635 CDS YP_004336772.1 327309874 10359488 146900..147484 1 NC_015314.1 hypothetical protein 147484 10359488 Psed_6834 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336772.1 146900 D 675635 CDS YP_004336773.1 327309875 10359489 147821..148951 1 NC_015314.1 KEGG: stp:Strop_0062 hypothetical protein; PFAM: DNA primase/polymerase, bifunctional, N-terminal; SMART: DNA primase/polymerase, bifunctional, N-terminal; Bifunctional DNA primase/polymerase 148951 10359489 Psed_6835 Pseudonocardia dioxanivorans CB1190 Bifunctional DNA primase/polymerase YP_004336773.1 147821 D 675635 CDS YP_004336774.1 327309876 10359490 148948..149163 1 NC_015314.1 hypothetical protein 149163 10359490 Psed_6836 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336774.1 148948 D 675635 CDS YP_004336775.1 327309877 10359491 149412..149693 1 NC_015314.1 hypothetical protein 149693 10359491 Psed_6837 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336775.1 149412 D 675635 CDS YP_004336776.1 327309878 10359492 149653..150201 1 NC_015314.1 hypothetical protein 150201 10359492 Psed_6838 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336776.1 149653 D 675635 CDS YP_004336777.1 327309879 10359493 150426..151448 1 NC_015314.1 KEGG: ace:Acel_1555 hypothetical protein; hypothetical protein 151448 10359493 Psed_6839 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336777.1 150426 D 675635 CDS YP_004336778.1 327309880 10359494 151872..152108 1 NC_015314.1 hypothetical protein 152108 10359494 Psed_6840 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336778.1 151872 D 675635 CDS YP_004336779.1 327309881 10359495 152200..152715 1 NC_015314.1 hypothetical protein 152715 10359495 Psed_6841 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336779.1 152200 D 675635 CDS YP_004336780.1 327309882 10359496 152814..153788 1 NC_015314.1 PFAM: DNA recombination-mediator protein A; KEGG: svi:Svir_09850 DNA protecting protein DprA; SMF family protein 153788 10359496 Psed_6842 Pseudonocardia dioxanivorans CB1190 SMF family protein YP_004336780.1 152814 D 675635 CDS YP_004336781.1 327309883 10359497 153855..154460 1 NC_015314.1 hypothetical protein 154460 10359497 Psed_6843 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336781.1 153855 D 675635 CDS YP_004336782.1 327309884 10359498 155007..155159 1 NC_015314.1 hypothetical protein 155159 10359498 Psed_6844 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336782.1 155007 D 675635 CDS YP_004336783.1 327309885 10359499 155248..155397 1 NC_015314.1 hypothetical protein 155397 10359499 Psed_6845 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336783.1 155248 D 675635 CDS YP_004336784.1 327309886 10359500 155394..155747 1 NC_015314.1 hypothetical protein 155747 10359500 Psed_6846 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336784.1 155394 D 675635 CDS YP_004336785.1 327309887 10359501 155744..156088 1 NC_015314.1 hypothetical protein 156088 10359501 Psed_6847 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336785.1 155744 D 675635 CDS YP_004336786.1 327309888 10359502 156396..157307 1 NC_015314.1 hypothetical protein 157307 10359502 Psed_6848 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336786.1 156396 D 675635 CDS YP_004336787.1 327309889 10359503 complement(157568..158080) 1 NC_015314.1 KEGG: mno:Mnod_4618 translation initiation factor IF-2; translation initiation factor IF-2 158080 10359503 Psed_6849 Pseudonocardia dioxanivorans CB1190 translation initiation factor IF-2 YP_004336787.1 157568 R 675635 CDS YP_004336788.1 327309890 10359504 complement(158315..158905) 1 NC_015314.1 KEGG: art:Arth_3833 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein 158905 10359504 Psed_6850 Pseudonocardia dioxanivorans CB1190 Rhodanese-like protein YP_004336788.1 158315 R 675635 CDS YP_004336789.1 327309891 10359505 complement(159004..160458) 1 NC_015314.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Multicopper oxidase, type 2; KEGG: msp:Mspyr1_54900 multicopper oxidase; multicopper oxidase type 3 160458 10359505 Psed_6851 Pseudonocardia dioxanivorans CB1190 multicopper oxidase type 3 YP_004336789.1 159004 R 675635 CDS YP_004336790.1 327309892 10359506 complement(160455..160685) 1 NC_015314.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: msp:Mspyr1_54890 membrane protein (DUF2078); hypothetical protein 160685 10359506 Psed_6852 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336790.1 160455 R 675635 CDS YP_004336791.1 327309893 10359507 complement(160764..161159) 1 NC_015314.1 PFAM: Domain of unknown function DUF302; KEGG: sco:SCO0165 hypothetical protein; hypothetical protein 161159 10359507 Psed_6853 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336791.1 160764 R 675635 CDS YP_004336792.1 327309894 10359508 complement(161210..162004) 1 NC_015314.1 PFAM: Protein of unknown function DUF81; KEGG: sen:SACE_2431 membrane permease protein; hypothetical protein 162004 10359508 Psed_6854 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336792.1 161210 R 675635 CDS YP_004336793.1 327309895 10359509 complement(162039..163442) 1 NC_015314.1 KEGG: mau:Micau_2767 rhodanese domain-containing protein; PFAM: Beta-lactamase-like; SMART: Rhodanese-like; Beta-lactamase-like; beta-lactamase domain-containing protein 163442 10359509 Psed_6855 Pseudonocardia dioxanivorans CB1190 beta-lactamase domain-containing protein YP_004336793.1 162039 R 675635 CDS YP_004336794.1 327309896 10359510 complement(163486..163800) 1 NC_015314.1 KEGG: rop:ROP_00410 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein 163800 10359510 Psed_6856 Pseudonocardia dioxanivorans CB1190 Rhodanese-like protein YP_004336794.1 163486 R 675635 CDS YP_004336795.1 327309897 10359511 complement(163907..164176) 1 NC_015314.1 PFAM: Protein of unknown function DUF156; KEGG: sen:SACE_5796 hypothetical protein; hypothetical protein 164176 10359511 Psed_6857 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336795.1 163907 R 675635 CDS YP_004336796.1 327309898 10359512 164290..165567 1 NC_015314.1 PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 165567 10359512 Psed_6858 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004336796.1 164290 D 675635 CDS YP_004336797.1 327309899 10359513 complement(165614..166663) 1 NC_015314.1 PFAM: Integrase, catalytic core; KEGG: nml:Namu_3083 integrase catalytic subunit; integrase catalytic subunit 166663 10359513 Psed_6859 Pseudonocardia dioxanivorans CB1190 integrase catalytic subunit YP_004336797.1 165614 R 675635 CDS YP_004336798.1 327309900 10359514 166788..167390 1 NC_015314.1 KEGG: swd:Swoo_0201 signal recognition particle-docking protein FtsY; hypothetical protein 167390 10359514 Psed_6860 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336798.1 166788 D 675635 CDS YP_004336799.1 327309901 10359515 complement(167391..167891) 1 NC_015314.1 hypothetical protein 167891 10359515 Psed_6861 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336799.1 167391 R 675635 CDS YP_004336800.1 327309902 10359516 complement(168187..169638) 1 NC_015314.1 HAMAP: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: sgr:SGR_785 putative NADH dehydrogenase chain N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NAD(P)H-quinone oxidoreductase subunit 2 169638 10359516 Psed_6862 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit 2 YP_004336800.1 168187 R 675635 CDS YP_004336801.1 327309903 10359517 complement(169635..171155) 1 NC_015314.1 TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: sgr:SGR_786 putative NADH dehydrogenase chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M 171155 10359517 Psed_6863 Pseudonocardia dioxanivorans CB1190 proton-translocating NADH-quinone oxidoreductase, chain M YP_004336801.1 169635 R 675635 CDS YP_004336802.1 327309904 10359518 complement(171186..173036) 1 NC_015314.1 KEGG: sgr:SGR_787 putative NADH dehydrogenase chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 173036 10359518 Psed_6864 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004336802.1 171186 R 675635 CDS YP_004336803.1 327309905 10359519 complement(173045..173350) 1 NC_015314.1 KEGG: sro:Sros_3680 NADH-ubiquinone oxidoreductase, chain 4L; HAMAP: NADH-ubiquinone oxidoreductase chain 4L/K; PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; NAD(P)H-quinone oxidoreductase subunit 4L 173350 10359519 Psed_6865 Pseudonocardia dioxanivorans CB1190 NAD(P)H-quinone oxidoreductase subunit 4L YP_004336803.1 173045 R 675635 CDS YP_004336804.1 327309906 10359520 complement(173347..173904) 1 NC_015314.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: sgr:SGR_789 putative NADH dehydrogenase chain J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 173904 10359520 Psed_6866 Pseudonocardia dioxanivorans CB1190 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004336804.1 173347 R 675635 CDS YP_004336805.1 327309907 10359521 complement(173922..174860) 1 NC_015314.1 KEGG: sgr:SGR_790 putative NADH dehydrogenase chain H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H; NADH dehydrogenase (quinone) 174860 10359521 Psed_6867 Pseudonocardia dioxanivorans CB1190 NADH dehydrogenase (quinone) YP_004336805.1 173922 R 675635 CDS YP_004336806.1 327309908 10359522 complement(174871..176205) 1 NC_015314.1 KEGG: sro:Sros_3683 hypothetical protein; hypothetical protein 176205 10359522 Psed_6868 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336806.1 174871 R 675635 CDS YP_004336807.1 327309909 10359523 complement(176196..176546) 1 NC_015314.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: sgr:SGR_792 putative NADH dehydrogenase chain A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 176546 10359523 Psed_6869 Pseudonocardia dioxanivorans CB1190 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_004336807.1 176196 R 675635 CDS YP_004336808.1 327309910 10359524 complement(176739..177401) 1 NC_015314.1 PFAM: Domain of unknown function DUF305; KEGG: nfa:nfa38100 hypothetical protein; hypothetical protein 177401 10359524 Psed_6870 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336808.1 176739 R 675635 CDS YP_004336809.1 327309911 10359525 complement(177470..177967) 1 NC_015314.1 hypothetical protein 177967 10359525 Psed_6871 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336809.1 177470 R 675635 CDS YP_004336810.1 327309912 10359526 complement(178094..179248) 1 NC_015314.1 KEGG: amd:AMED_8813 high-affinity nickel-transport protein; TIGRFAM: Nickel/cobalt transporter, high-affinity, bacteria; PFAM: Nickel/cobalt transporter, high-affinity; high-affinity nickel-transporter 179248 10359526 Psed_6872 Pseudonocardia dioxanivorans CB1190 high-affinity nickel-transporter YP_004336810.1 178094 R 675635 CDS YP_004336811.1 327309913 10359527 179508..179789 1 NC_015314.1 PFAM: Protein of unknown function DUF156; KEGG: mkm:Mkms_0157 hypothetical protein; hypothetical protein 179789 10359527 Psed_6873 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336811.1 179508 D 675635 CDS YP_004336812.1 327309914 10359528 179945..180154 1 NC_015314.1 KEGG: fre:Franean1_5745 heavy metal transport/detoxification protein; TIGRFAM: Copper ion-binding; PFAM: Heavy metal transport/detoxification protein; copper ion binding protein 180154 10359528 Psed_6874 Pseudonocardia dioxanivorans CB1190 copper ion binding protein YP_004336812.1 179945 D 675635 CDS YP_004336813.1 327309915 10359529 180214..181218 1 NC_015314.1 KEGG: sen:SACE_4147 secreted protein; secreted protein 181218 10359529 Psed_6875 Pseudonocardia dioxanivorans CB1190 secreted protein YP_004336813.1 180214 D 675635 CDS YP_004336814.1 327309916 10359530 181218..183593 1 NC_015314.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: fre:Franean1_5747 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 183593 10359530 Psed_6876 Pseudonocardia dioxanivorans CB1190 heavy metal translocating P-type ATPase YP_004336814.1 181218 D 675635 CDS YP_004336815.1 327309917 10359554 184857..185528 1 NC_015314.1 hypothetical protein 185528 10359554 Psed_6878 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336815.1 184857 D 675635 CDS YP_004336816.1 327309918 10359532 complement(185764..186966) 1 NC_015314.1 KEGG: srt:Srot_2293 S-adenosylmethionine synthetase; manually curated; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; HAMAP: S-adenosylmethionine synthetase; S-adenosylmethionine synthase 186966 10359532 Psed_6879 Pseudonocardia dioxanivorans CB1190 S-adenosylmethionine synthase YP_004336816.1 185764 R 675635 CDS YP_004336817.1 327309919 10359533 187855..188391 1 NC_015314.1 hypothetical protein 188391 10359533 Psed_6880 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004336817.1 187855 D 675635 CDS YP_004336818.1 327309920 10359534 188500..189582 1 NC_015314.1 PFAM: Methyltransferase type 11; KEGG: sfu:Sfum_3434 methyltransferase type 11; Methyltransferase type 11 189582 10359534 Psed_6881 Pseudonocardia dioxanivorans CB1190 Methyltransferase type 11 YP_004336818.1 188500 D 675635 CDS YP_004336819.1 327309921 10359535 complement(190046..190630) 1 NC_015314.1 PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: fri:FraEuI1c_5602 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic 190630 10359535 Psed_6882 Pseudonocardia dioxanivorans CB1190 filamentation induced by cAMP protein Fic YP_004336819.1 190046 R 675635 CDS YP_004991158.1 375129062 11633322 complement(<1..1150) 1 NC_016600.1 KEGG: nfa:pnf11430 hypothetical protein; hypothetical protein 1150 11633322 Psed_6903 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991158.1 <1 R 675635 CDS YP_004991159.1 375129063 11633323 complement(1143..1580) 1 NC_016600.1 hypothetical protein 1580 11633323 Psed_6904 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991159.1 1143 R 675635 CDS YP_004991160.1 375129064 11633324 complement(1849..2127) 1 NC_016600.1 hypothetical protein 2127 11633324 Psed_6905 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991160.1 1849 R 675635 CDS YP_004991161.1 375129065 11633325 complement(2140..2640) 1 NC_016600.1 KEGG: nfa:pnf11480 hypothetical protein; hypothetical protein 2640 11633325 Psed_6906 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991161.1 2140 R 675635 CDS YP_004991162.1 375129066 11633326 complement(3391..3684) 1 NC_016600.1 hypothetical protein 3684 11633326 Psed_6907 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991162.1 3391 R 675635 CDS YP_004991163.1 375129067 11633327 complement(3740..4066) 1 NC_016600.1 hypothetical protein 4066 11633327 Psed_6908 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991163.1 3740 R 675635 CDS YP_004991164.1 375129068 11633328 complement(4071..5462) 1 NC_016600.1 KEGG: lcb:LCABL_26070 possible cell surface protein; hypothetical protein 5462 11633328 Psed_6909 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991164.1 4071 R 675635 CDS YP_004991165.1 375129069 11633329 5722..6168 1 NC_016600.1 PFAM: Helix-turn-helix type 3; KEGG: tpr:Tpau_4134 putative DNA-binding protein; helix-turn-helix domain-containing protein 6168 11633329 Psed_6910 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004991165.1 5722 D 675635 CDS YP_004991166.1 375129070 11633330 6326..6667 1 NC_016600.1 hypothetical protein 6667 11633330 Psed_6911 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991166.1 6326 D 675635 CDS YP_004991167.1 375129071 11633331 6860..7411 1 NC_016600.1 manually curated; KEGG: amd:AMED_0903 hypothetical protein; hypothetical protein 7411 11633331 Psed_6912 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991167.1 6860 D 675635 CDS YP_004991168.1 375129072 11633332 7408..8580 1 NC_016600.1 KEGG: amd:AMED_7102 hypothetical protein; hypothetical protein 8580 11633332 Psed_6913 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991168.1 7408 D 675635 CDS YP_004991169.1 375129073 11633286 8577..9788 1 NC_016600.1 PFAM: Amidohydrolase 1; KEGG: amd:AMED_0901 amidohydrolase; amidohydrolase 9788 11633286 Psed_6914 Pseudonocardia dioxanivorans CB1190 amidohydrolase YP_004991169.1 8577 D 675635 CDS YP_004991170.1 375129074 11633287 complement(9945..10787) 1 NC_016600.1 KEGG: tcu:Tcur_0281 hypothetical protein; hypothetical protein 10787 11633287 Psed_6915 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991170.1 9945 R 675635 CDS YP_004991171.1 375129075 11633288 complement(10945..12384) 1 NC_016600.1 KEGG: scl:sce6360 hypothetical protein; hypothetical protein 12384 11633288 Psed_6916 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991171.1 10945 R 675635 CDS YP_004991172.1 375129076 11633290 12753..12980 1 NC_016600.1 KEGG: nda:Ndas_1294 helix-turn-helix domain protein; helix-turn-helix domain-containing protein 12980 11633290 Psed_6918 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain-containing protein YP_004991172.1 12753 D 675635 CDS YP_004991173.1 375129077 11633292 complement(13697..15223) 1 NC_016600.1 KEGG: sen:SACE_3387 bile acid-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 15223 11633292 Psed_6920 Pseudonocardia dioxanivorans CB1190 o-succinylbenzoate--CoA ligase YP_004991173.1 13697 R 675635 CDS YP_004991174.1 375129078 11633293 complement(15220..16041) 1 NC_016600.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: sme:SM_b20534 hypothetical protein; xylose isomerase domain-containing protein 16041 11633293 Psed_6921 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004991174.1 15220 R 675635 CDS YP_004991175.1 375129079 11633294 complement(16045..17079) 1 NC_016600.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: rha:RHA1_ro09044 ABC peptide transporter, ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; oligopeptide/dipeptide ABC transporter ATPase 17079 11633294 Psed_6922 Pseudonocardia dioxanivorans CB1190 oligopeptide/dipeptide ABC transporter ATPase YP_004991175.1 16045 R 675635 CDS YP_004991176.1 375129080 11633295 complement(17079..18209) 1 NC_016600.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: rha:RHA1_ro09045 ABC peptide transporter, ATP-binding component; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; oligopeptide/dipeptide ABC transporter ATPase 18209 11633295 Psed_6923 Pseudonocardia dioxanivorans CB1190 oligopeptide/dipeptide ABC transporter ATPase YP_004991176.1 17079 R 675635 CDS YP_004991177.1 375129081 11633296 complement(18224..19801) 1 NC_016600.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter periplasmic protein 19801 11633296 Psed_6924 Pseudonocardia dioxanivorans CB1190 ABC transporter periplasmic protein YP_004991177.1 18224 R 675635 CDS YP_004991178.1 375129082 11633297 complement(19845..20735) 1 NC_016600.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro09046 ABC peptide transporter, permease component; ABC transporter 20735 11633297 Psed_6925 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004991178.1 19845 R 675635 CDS YP_004991179.1 375129083 11633298 complement(20732..21685) 1 NC_016600.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro09047 ABC peptide transporter, permease component; ABC transporter 21685 11633298 Psed_6926 Pseudonocardia dioxanivorans CB1190 ABC transporter YP_004991179.1 20732 R 675635 CDS YP_004991180.1 375129084 11633299 complement(21787..23133) 1 NC_016600.1 PFAM: Amidohydrolase 2; KEGG: fri:FraEuI1c_1470 amidohydrolase 2; amidohydrolase 2 23133 11633299 Psed_6927 Pseudonocardia dioxanivorans CB1190 amidohydrolase 2 YP_004991180.1 21787 R 675635 CDS YP_004991181.1 375129085 11633300 23435..24469 1 NC_016600.1 KEGG: ami:Amir_5343 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 24469 11633300 Psed_6928 Pseudonocardia dioxanivorans CB1190 LacI family transcriptional regulator YP_004991181.1 23435 D 675635 CDS YP_004991182.1 375129086 11633301 24855..26003 1 NC_016600.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: ami:Amir_4009 oxidoreductase domain protein; oxidoreductase domain-containing protein 26003 11633301 Psed_6929 Pseudonocardia dioxanivorans CB1190 oxidoreductase domain-containing protein YP_004991182.1 24855 D 675635 CDS YP_004991183.1 375129087 11633302 26015..27163 1 NC_016600.1 PFAM: Protein of unknown function DUF993; KEGG: ami:Amir_4008 hypothetical protein; hypothetical protein 27163 11633302 Psed_6930 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991183.1 26015 D 675635 CDS YP_004991184.1 375129088 11633303 27160..28005 1 NC_016600.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: mau:Micau_3038 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 28005 11633303 Psed_6931 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004991184.1 27160 D 675635 CDS YP_004991185.1 375129089 11633304 28007..29107 1 NC_016600.1 TIGRFAM: Glycerate kinase; KEGG: fra:Francci3_4457 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase 29107 11633304 Psed_6932 Pseudonocardia dioxanivorans CB1190 glycerate kinase YP_004991185.1 28007 D 675635 CDS YP_004991186.1 375129090 11633306 29933..30499 1 NC_016600.1 PFAM: Uncharacterised protein family YphA; KEGG: amd:AMED_7198 hypothetical protein; DoxX family protein 30499 11633306 Psed_6934 Pseudonocardia dioxanivorans CB1190 DoxX family protein YP_004991186.1 29933 D 675635 CDS YP_004991187.1 375129091 11633307 30569..31663 1 NC_016600.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: swi:Swit_4311 extradiol ring-cleavage dioxygenase III subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 31663 11633307 Psed_6935 Pseudonocardia dioxanivorans CB1190 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004991187.1 30569 D 675635 CDS YP_004991188.1 375129092 11633309 complement(32225..33484) 1 NC_016600.1 KEGG: svi:Svir_14840 transcriptional regulator/sugar kinase; PFAM: ROK; glucokinase 33484 11633309 Psed_6937 Pseudonocardia dioxanivorans CB1190 glucokinase YP_004991188.1 32225 R 675635 CDS YP_004991189.1 375129093 11633310 complement(33543..33743) 1 NC_016600.1 KEGG: rha:RHA1_ro10212 phthalate 3,4-dioxygenase ferredoxin subunit; phthalate 3,4-dioxygenase ferredoxin subunit 33743 11633310 Psed_6938 Pseudonocardia dioxanivorans CB1190 phthalate 3,4-dioxygenase ferredoxin subunit YP_004991189.1 33543 R 675635 CDS YP_004991190.1 375129094 11633311 complement(33740..34123) 1 NC_016600.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll7609 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) iron-sulfur domain-containing protein 34123 11633311 Psed_6939 Pseudonocardia dioxanivorans CB1190 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004991190.1 33740 R 675635 CDS YP_004991191.1 375129095 11633312 complement(34120..35205) 1 NC_016600.1 PFAM: Amidohydrolase 2; KEGG: oca:OCAR_6791 amidohydrolase family; amidohydrolase 2 35205 11633312 Psed_6940 Pseudonocardia dioxanivorans CB1190 amidohydrolase 2 YP_004991191.1 34120 R 675635 CDS YP_004991192.1 375129096 11633313 complement(35243..36607) 1 NC_016600.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rxy:Rxyl_2344 major facilitator transporter; major facilitator superfamily protein 36607 11633313 Psed_6941 Pseudonocardia dioxanivorans CB1190 major facilitator superfamily protein YP_004991192.1 35243 R 675635 CDS YP_004991193.1 375129097 11633314 37095..38132 1 NC_016600.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: art:Arth_1913 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 38132 11633314 Psed_6942 Pseudonocardia dioxanivorans CB1190 oxidoreductase domain-containing protein YP_004991193.1 37095 D 675635 CDS YP_004991194.1 375129098 11633315 38129..39049 1 NC_016600.1 PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: cai:Caci_5338 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 39049 11633315 Psed_6943 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004991194.1 38129 D 675635 CDS YP_004991195.1 375129099 11633316 39060..39923 1 NC_016600.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: ttr:Tter_2313 oxidoreductase domain protein; xylose isomerase domain-containing protein 39923 11633316 Psed_6944 Pseudonocardia dioxanivorans CB1190 xylose isomerase domain-containing protein YP_004991195.1 39060 D 675635 CDS YP_004991196.1 375129100 11633317 40304..40504 1 NC_016600.1 PFAM: Ferredoxin soy-like; KEGG: rha:RHA1_ro10212 phthalate 3,4-dioxygenase ferredoxin subunit; hypothetical protein 40504 11633317 Psed_6945 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991196.1 40304 D 675635 CDS YP_004991197.1 375129101 11633318 40501..41694 1 NC_016600.1 KEGG: kfl:Kfla_4098 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 41694 11633318 Psed_6946 Pseudonocardia dioxanivorans CB1190 ferredoxin--NAD(+) reductase YP_004991197.1 40501 D 675635 CDS YP_004991198.1 375129102 11633319 complement(41905..42813) 1 NC_016600.1 KEGG: ate:Athe_2312 hypothetical protein; hypothetical protein 42813 11633319 Psed_6947 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991198.1 41905 R 675635 CDS YP_004991199.1 375129103 11633320 43430..44725 1 NC_016600.1 KEGG: nml:Namu_3667 transposase mutator type; manually curated; PFAM: Transposase, mutator type; transposase mutator type 44725 11633320 Psed_6948 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004991199.1 43430 D 675635 CDS YP_004991200.1 375129104 11633321 complement(44719..45258) 1 NC_016600.1 hypothetical protein 45258 11633321 Psed_6949 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991200.1 44719 R 675635 CDS YP_004991201.1 375129106 11633386 751..1980 1 NC_016601.1 KEGG: mbt:JTY_3207 hypothetical protein; hypothetical protein 1980 11633386 Psed_6951 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991201.1 751 D 675635 CDS YP_004991202.1 375129107 11633387 complement(1890..3716) 1 NC_016601.1 PFAM: Transglycosylase-like; KEGG: yli:YALI0C11165g YALI0C11165p; Transglycosylase-like domain protein 3716 11633387 Psed_6952 Pseudonocardia dioxanivorans CB1190 Transglycosylase-like domain protein YP_004991202.1 1890 R 675635 CDS YP_004991203.1 375129108 11633388 complement(3830..5116) 1 NC_016601.1 KEGG: mva:Mvan_5243 hypothetical protein; hypothetical protein 5116 11633388 Psed_6953 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991203.1 3830 R 675635 CDS YP_004991204.1 375129109 11633389 complement(5122..6453) 1 NC_016601.1 KEGG: tcu:Tcur_0128 chromosome partitioning ATPase; chromosome partitioning ATPase 6453 11633389 Psed_6954 Pseudonocardia dioxanivorans CB1190 chromosome partitioning ATPase YP_004991204.1 5122 R 675635 CDS YP_004991205.1 375129110 11633390 complement(6450..6911) 1 NC_016601.1 KEGG: kfl:Kfla_2555 hypothetical protein; hypothetical protein 6911 11633390 Psed_6955 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991205.1 6450 R 675635 CDS YP_004991206.1 375129111 11633391 7163..7810 1 NC_016601.1 KEGG: ami:Amir_0167 PE-PGRS family protein; hypothetical protein 7810 11633391 Psed_6956 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991206.1 7163 D 675635 CDS YP_004991207.1 375129112 11633392 7815..8285 1 NC_016601.1 PFAM: Helix-turn-helix type 3; KEGG: amd:AMED_1799 hypothetical protein; helix-turn-helix domain protein 8285 11633392 Psed_6957 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain protein YP_004991207.1 7815 D 675635 CDS YP_004991208.1 375129113 11633393 8798..9454 1 NC_016601.1 KEGG: bcv:Bcav_1798 hypothetical protein; hypothetical protein 9454 11633393 Psed_6958 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991208.1 8798 D 675635 CDS YP_004991209.1 375129114 11633394 complement(9673..10662) 1 NC_016601.1 PFAM: NLP/P60; KEGG: mil:ML5_6031 nlp/p60 protein; NLP/P60 protein 10662 11633394 Psed_6959 Pseudonocardia dioxanivorans CB1190 NLP/P60 protein YP_004991209.1 9673 R 675635 CDS YP_004991210.1 375129115 11633395 10789..11679 1 NC_016601.1 KEGG: kfl:Kfla_2197 bifunctional DNA primase/polymerase; PFAM: DNA primase/polymerase, bifunctional, N-terminal; SMART: DNA primase/polymerase, bifunctional, N-terminal; Bifunctional DNA primase/polymerase 11679 11633395 Psed_6960 Pseudonocardia dioxanivorans CB1190 Bifunctional DNA primase/polymerase YP_004991210.1 10789 D 675635 CDS YP_004991211.1 375129116 11633334 11802..12077 1 NC_016601.1 hypothetical protein 12077 11633334 Psed_6961 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991211.1 11802 D 675635 CDS YP_004991212.1 375129117 11633335 12235..13842 1 NC_016601.1 KEGG: tbi:Tbis_3041 hypothetical protein; hypothetical protein 13842 11633335 Psed_6962 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991212.1 12235 D 675635 CDS YP_004991213.1 375129118 11633336 13839..15215 1 NC_016601.1 TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: svi:Svir_39470 primary replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase 15215 11633336 Psed_6963 Pseudonocardia dioxanivorans CB1190 replicative DNA helicase YP_004991213.1 13839 D 675635 CDS YP_004991214.1 375129119 11633337 15525..16781 1 NC_016601.1 PFAM: Transposase, mutator type; KEGG: mbt:JTY_3135 putative transposase; transposase mutator type 16781 11633337 Psed_6964 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004991214.1 15525 D 675635 CDS YP_004991215.1 375129120 11633338 16993..17142 1 NC_016601.1 hypothetical protein 17142 11633338 Psed_6965 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991215.1 16993 D 675635 CDS YP_004991216.1 375129121 11633339 17139..18434 1 NC_016601.1 PFAM: Zeta toxin; KEGG: fra:Francci3_2358 zeta toxin; Zeta toxin family protein 18434 11633339 Psed_6966 Pseudonocardia dioxanivorans CB1190 Zeta toxin family protein YP_004991216.1 17139 D 675635 CDS YP_004991217.1 375129122 11633340 18501..19541 1 NC_016601.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: fri:FraEuI1c_6427 integrase family protein; integrase family protein 19541 11633340 Psed_6967 Pseudonocardia dioxanivorans CB1190 integrase family protein YP_004991217.1 18501 D 675635 CDS YP_004991218.1 375129123 11633341 19741..21036 1 NC_016601.1 PFAM: Transposase, mutator type; KEGG: nml:Namu_3667 transposase mutator type; transposase mutator type 21036 11633341 Psed_6968 Pseudonocardia dioxanivorans CB1190 transposase mutator type YP_004991218.1 19741 D 675635 CDS YP_004991219.1 375129124 11633343 complement(22650..25577) 1 NC_016601.1 manually curated; KEGG: sen:SACE_3788 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Cysteine-rich domain; D-lactate dehydrogenase (cytochrome) 25577 11633343 Psed_6970 Pseudonocardia dioxanivorans CB1190 D-lactate dehydrogenase (cytochrome) YP_004991219.1 22650 R 675635 CDS YP_004991220.1 375129125 11633344 complement(25781..27070) 1 NC_016601.1 KEGG: gob:Gobs_1823 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Hydroxyacid-oxoacid transhydrogenase 27070 11633344 Psed_6971 Pseudonocardia dioxanivorans CB1190 Hydroxyacid-oxoacid transhydrogenase YP_004991220.1 25781 R 675635 CDS YP_004991221.1 375129126 11633345 complement(27413..28144) 1 NC_016601.1 manually curated; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; KEGG: svi:Svir_08590 transcriptional regulator; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 28144 11633345 Psed_6972 Pseudonocardia dioxanivorans CB1190 GntR family transcriptional regulator YP_004991221.1 27413 R 675635 CDS YP_004991222.1 375129127 11633346 complement(28284..28382) 1 NC_016601.1 hypothetical protein 28382 11633346 Psed_6973 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991222.1 28284 R 675635 CDS YP_004991223.1 375129128 11633347 28996..29319 1 NC_016601.1 KEGG: reu:Reut_B3850 ethyl tert-butyl ether degradation EthD; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; Ethyl tert-butyl ether degradation EthD 29319 11633347 Psed_6974 Pseudonocardia dioxanivorans CB1190 Ethyl tert-butyl ether degradation EthD YP_004991223.1 28996 D 675635 CDS YP_004991224.1 375129129 11633348 29472..30974 1 NC_016601.1 KEGG: min:Minf_1839 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Betaine-aldehyde dehydrogenase 30974 11633348 Psed_6975 Pseudonocardia dioxanivorans CB1190 Betaine-aldehyde dehydrogenase YP_004991224.1 29472 D 675635 CDS YP_004991225.1 375129130 11633350 32884..33972 1 NC_016601.1 KEGG: fra:Francci3_2519 oxidoreductase FAD-binding region; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin--NAD(+) reductase 33972 11633350 Psed_6977 Pseudonocardia dioxanivorans CB1190 Ferredoxin--NAD(+) reductase YP_004991225.1 32884 D 675635 CDS YP_004991226.1 375129131 11633351 34003..35043 1 NC_016601.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: nca:Noca_4809 methane monooxygenase; methane/phenol/toluene hydroxylase 35043 11633351 Psed_6978 Pseudonocardia dioxanivorans CB1190 methane/phenol/toluene hydroxylase YP_004991226.1 34003 D 675635 CDS YP_004991227.1 375129132 11633352 35043..35396 1 NC_016601.1 PFAM: Monooxygenase component MmoB/DmpM; KEGG: gbr:Gbro_3554 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 35396 11633352 Psed_6979 Pseudonocardia dioxanivorans CB1190 monooxygenase component MmoB/DmpM YP_004991227.1 35043 D 675635 CDS YP_004991228.1 375129133 11633353 35635..36312 1 NC_016601.1 manually curated; KEGG: fra:Francci3_1236 hypothetical protein; hypothetical protein 36312 11633353 Psed_6980 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991228.1 35635 D 675635 CDS YP_004991229.1 375129134 11633354 36566..38005 1 NC_016601.1 KEGG: cai:Caci_7826 aldehyde dehydrogenase; manually curated; PFAM: Aldehyde dehydrogenase domain; Aldehyde Dehydrogenase 38005 11633354 Psed_6981 Pseudonocardia dioxanivorans CB1190 Aldehyde Dehydrogenase YP_004991229.1 36566 D 675635 CDS YP_004991230.1 375129135 11633355 38268..39509 1 NC_016601.1 KEGG: mkm:Mkms_4453 Mn2+/Fe2+ transporter; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; Mn2+/Fe2+ transporter, NRAMP family 39509 11633355 Psed_6982 Pseudonocardia dioxanivorans CB1190 Mn2+/Fe2+ transporter, NRAMP family YP_004991230.1 38268 D 675635 CDS YP_004991231.1 375129136 11633358 42196..43284 1 NC_016601.1 PFAM: Transposase, IS116/IS110/IS902; KEGG: sma:SAV_634 IS110 family transposase; transposase IS116/IS110/IS902 family protein 43284 11633358 Psed_6985 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004991231.1 42196 D 675635 CDS YP_004991232.1 375129137 11633360 43628..45040 1 NC_016601.1 KEGG: mau:Micau_6070 integrase catalytic domain-containing protein; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic region 45040 11633360 Psed_6987 Pseudonocardia dioxanivorans CB1190 Integrase catalytic region YP_004991232.1 43628 D 675635 CDS YP_004991233.1 375129138 11633361 45037..45810 1 NC_016601.1 KEGG: sco:SCO6394 IS element ATP binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain protein ATP-binding protein 45810 11633361 Psed_6988 Pseudonocardia dioxanivorans CB1190 IstB domain protein ATP-binding protein YP_004991233.1 45037 D 675635 CDS YP_004991234.1 375129139 11633363 46549..47742 1 NC_016601.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: msp:Mspyr1_01360 transposase; transposase IS116/IS110/IS902 family protein 47742 11633363 Psed_6990 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004991234.1 46549 D 675635 CDS YP_004991235.1 375129140 11633364 47964..49202 1 NC_016601.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: mau:Micau_4072 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 49202 11633364 Psed_6991 Pseudonocardia dioxanivorans CB1190 transposase IS116/IS110/IS902 family protein YP_004991235.1 47964 D 675635 CDS YP_004991236.1 375129141 11633365 49419..50561 1 NC_016601.1 KEGG: aau:AAur_pTC10275 hypothetical protein; hypothetical protein 50561 11633365 Psed_6992 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991236.1 49419 D 675635 CDS YP_004991237.1 375129142 11633366 complement(50973..52073) 1 NC_016601.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nfa:pnf120 putative plasmid partitioning protein; SMART: ParB-like nuclease; parB-like partition protein 52073 11633366 Psed_6993 Pseudonocardia dioxanivorans CB1190 parB-like partition protein YP_004991237.1 50973 R 675635 CDS YP_004991238.1 375129143 11633367 complement(52079..53080) 1 NC_016601.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: svi:Svir_22160 chromosome partitioning ATPase; Cobyrinic acid ac-diamide synthase 53080 11633367 Psed_6994 Pseudonocardia dioxanivorans CB1190 Cobyrinic acid ac-diamide synthase YP_004991238.1 52079 R 675635 CDS YP_004991239.1 375129144 11633368 complement(53087..53386) 1 NC_016601.1 hypothetical protein 53386 11633368 Psed_6995 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991239.1 53087 R 675635 CDS YP_004991240.1 375129145 11633369 53668..54369 1 NC_016601.1 KEGG: ace:Acel_1025 hypothetical protein; hypothetical protein 54369 11633369 Psed_6996 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991240.1 53668 D 675635 CDS YP_004991241.1 375129146 11633370 55252..55764 1 NC_016601.1 hypothetical protein 55764 11633370 Psed_6997 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991241.1 55252 D 675635 CDS YP_004991242.1 375129147 11633371 56389..56592 1 NC_016601.1 hypothetical protein 56592 11633371 Psed_6998 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991242.1 56389 D 675635 CDS YP_004991243.1 375129148 11633372 57445..57828 1 NC_016601.1 hypothetical protein 57828 11633372 Psed_6999 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991243.1 57445 D 675635 CDS YP_004991244.1 375129149 11633373 57825..58394 1 NC_016601.1 KEGG: fal:FRAAL6348 hypothetical protein; hypothetical protein 58394 11633373 Psed_7000 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991244.1 57825 D 675635 CDS YP_004991245.1 375129150 11633374 58384..59253 1 NC_016601.1 manually curated; PFAM: Helix-turn-helix type 3; KEGG: nda:Ndas_2376 helix-turn-helix domain protein; SMART: Helix-turn-helix type 3; helix-turn-helix domain protein 59253 11633374 Psed_7001 Pseudonocardia dioxanivorans CB1190 helix-turn-helix domain protein YP_004991245.1 58384 D 675635 CDS YP_004991246.1 375129151 11633375 59429..59713 1 NC_016601.1 PFAM: Transcription factor WhiB; KEGG: pak:HMPREF0675_4328 transcription factor WhiB; transcription factor WhiB 59713 11633375 Psed_7002 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004991246.1 59429 D 675635 CDS YP_004991247.1 375129152 11633376 59710..60798 1 NC_016601.1 KEGG: nfa:nfa7460 hypothetical protein; hypothetical protein 60798 11633376 Psed_7003 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991247.1 59710 D 675635 CDS YP_004991248.1 375129153 11633377 60882..61097 1 NC_016601.1 hypothetical protein 61097 11633377 Psed_7004 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991248.1 60882 D 675635 CDS YP_004991249.1 375129154 11633378 61094..61393 1 NC_016601.1 hypothetical protein 61393 11633378 Psed_7005 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991249.1 61094 D 675635 CDS YP_004991250.1 375129155 11633379 61390..61926 1 NC_016601.1 KEGG: sna:Snas_6255 hypothetical protein; hypothetical protein 61926 11633379 Psed_7006 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991250.1 61390 D 675635 CDS YP_004991251.1 375129156 11633380 61958..62398 1 NC_016601.1 hypothetical protein 62398 11633380 Psed_7007 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991251.1 61958 D 675635 CDS YP_004991252.1 375129157 11633381 62404..63441 1 NC_016601.1 hypothetical protein 63441 11633381 Psed_7008 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991252.1 62404 D 675635 CDS YP_004991253.1 375129158 11633382 63619..65775 1 NC_016601.1 KEGG: fri:FraEuI1c_5828 hypothetical protein; hypothetical protein 65775 11633382 Psed_7009 Pseudonocardia dioxanivorans CB1190 hypothetical protein YP_004991253.1 63619 D 675635 CDS YP_004991254.1 375129159 11633383 65895..66302 1 NC_016601.1 PFAM: Transcription factor WhiB; KEGG: sen:SACE_6464 WhiB family transcriptional regulator; transcription factor WhiB 66302 11633383 Psed_7010 Pseudonocardia dioxanivorans CB1190 transcription factor WhiB YP_004991254.1 65895 D 675635 CDS YP_004991255.1 375129160 11633384 66299..66718 1 NC_016601.1 PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: fri:FraEuI1c_2318 sporulation and cell division protein SsgA; sporulation and cell division protein SsgA 66718 11633384 Psed_7011 Pseudonocardia dioxanivorans CB1190 sporulation and cell division protein SsgA YP_004991255.1 66299 D 675635 CDS