-- dump date 20120504_155704 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 675635000001 SEQ_END SEQ_END NC_015312.1 7096571 7096571 DR NC_015312.1; contig end 7096571..7096571 Pseudonocardia dioxanivorans CB1190 675635000002 SEQ_END SEQ_END NC_015313.1 15063 15063 DR NC_015313.1; contig end 15063..15063 Pseudonocardia dioxanivorans CB1190 675635000003 SEQ_END SEQ_END NC_015314.1 192355 192355 DR NC_015314.1; contig end 192355..192355 Pseudonocardia dioxanivorans CB1190 675635000004 SEQ_END SEQ_END NC_016600.1 45552 45552 DR NC_016600.1; contig end 45552..45552 Pseudonocardia dioxanivorans CB1190 675635000005 SEQ_END SEQ_END NC_016601.1 66907 66907 DR NC_016601.1; contig end 66907..66907 Pseudonocardia dioxanivorans CB1190 YP_004330139.1 CDS Psed_0001 NC_015312.1 121 1788 D SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: ami:Amir_0001 chromosomal replication initiation protein; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; chromosome replication initiator DnaA 121..1788 Pseudonocardia dioxanivorans CB1190 10368550 YP_004330140.1 CDS Psed_0002 NC_015312.1 2771 3901 D SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: amd:AMED_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, C-terminal; DNA polymerase III subunit beta 2771..3901 Pseudonocardia dioxanivorans CB1190 10361803 YP_004330141.1 CDS Psed_0003 NC_015312.1 4026 5168 D TIGRFAM: DNA-binding, RecF; HAMAP: DNA-binding, RecF; KEGG: ami:Amir_0004 recombination protein F; PFAM: RecF/RecN/SMC; DNA replication and repair protein RecF 4026..5168 Pseudonocardia dioxanivorans CB1190 10361804 YP_004330142.1 CDS Psed_0004 NC_015312.1 5311 5907 D KEGG: sen:SACE_0006 hypothetical protein; HAMAP: Uncharacterised protein family UPF0232, actinobacteria; PFAM: Protein of unknown function DUF721/UPF0232; hypothetical protein 5311..5907 Pseudonocardia dioxanivorans CB1190 10361805 YP_004330143.1 CDS Psed_0005 NC_015312.1 6257 8239 D SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; TIGRFAM: DNA gyrase, subunit B; KEGG: rha:RHA1_ro03674 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA gyrase subunit B 6257..8239 Pseudonocardia dioxanivorans CB1190 10361806 YP_004330144.1 CDS Psed_0006 NC_015312.1 8283 10802 D SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: sen:SACE_0009 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA gyrase subunit A 8283..10802 Pseudonocardia dioxanivorans CB1190 10361807 YP_004330145.1 CDS Psed_0007 NC_015312.1 10861 11964 D KEGG: ami:Amir_0008 hypothetical protein; hypothetical protein 10861..11964 Pseudonocardia dioxanivorans CB1190 10361808 YP_004330146.1 CDS Psed_0008 NC_015312.1 12174 12293 D hypothetical protein 12174..12293 Pseudonocardia dioxanivorans CB1190 10361810 YP_004330147.1 CDS Psed_0009 NC_015312.1 12492 13814 D PFAM: Integrase, catalytic core, phage; KEGG: fri:FraEuI1c_5809 integrase protein; integrase protein 12492..13814 Pseudonocardia dioxanivorans CB1190 10361812 YP_004330148.1 CDS Psed_0010 NC_015312.1 14562 14732 D hypothetical protein 14562..14732 Pseudonocardia dioxanivorans CB1190 10361813 YP_004330149.1 CDS Psed_0011 NC_015312.1 14977 15759 D KEGG: nar:Saro_3091 hypothetical protein; hypothetical protein 14977..15759 Pseudonocardia dioxanivorans CB1190 10361814 YP_004330150.1 CDS Psed_0012 NC_015312.1 15947 16051 D hypothetical protein 15947..16051 Pseudonocardia dioxanivorans CB1190 10361815 YP_004330151.1 CDS Psed_0013 NC_015312.1 16048 16314 D hypothetical protein 16048..16314 Pseudonocardia dioxanivorans CB1190 10361816 YP_004330152.1 CDS Psed_0014 NC_015312.1 16335 17228 R PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein complement(16335..17228) Pseudonocardia dioxanivorans CB1190 10361817 YP_004330153.1 CDS Psed_0016 NC_015312.1 17717 19462 D PFAM: Integrase, catalytic core; KEGG: cai:Caci_3873 integrase catalytic region; integrase catalytic subunit 17717..19462 Pseudonocardia dioxanivorans CB1190 10361819 YP_004330154.1 CDS Psed_0017 NC_015312.1 19459 20271 D KEGG: cai:Caci_3872 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 19459..20271 Pseudonocardia dioxanivorans CB1190 10361820 YP_004330155.1 CDS Psed_0018 NC_015312.1 20268 21545 D PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 20268..21545 Pseudonocardia dioxanivorans CB1190 10361821 YP_004330156.1 CDS Psed_0020 NC_015312.1 22458 22712 R hypothetical protein complement(22458..22712) Pseudonocardia dioxanivorans CB1190 10361823 YP_004330157.1 CDS Psed_0021 NC_015312.1 22895 23455 R PFAM: Isochorismatase-like; KEGG: saq:Sare_1936 isochorismatase hydrolase; isochorismatase hydrolase complement(22895..23455) Pseudonocardia dioxanivorans CB1190 10361824 YP_004330158.1 CDS Psed_0022 NC_015312.1 23458 24651 R KEGG: saq:Sare_1935 hypothetical protein; hypothetical protein complement(23458..24651) Pseudonocardia dioxanivorans CB1190 10361825 YP_004330159.1 CDS Psed_0023 NC_015312.1 24733 25074 R KEGG: kfl:Kfla_2179 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(24733..25074) Pseudonocardia dioxanivorans CB1190 10361826 YP_004330160.1 CDS Psed_0024 NC_015312.1 25222 25554 D TIGRFAM: Excisionase/Xis, DNA-binding; excisionase 25222..25554 Pseudonocardia dioxanivorans CB1190 10361827 YP_004330161.1 CDS Psed_0025 NC_015312.1 25503 25784 D hypothetical protein 25503..25784 Pseudonocardia dioxanivorans CB1190 10361828 YP_004330162.1 CDS Psed_0027 NC_015312.1 26618 27409 R KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(26618..27409) Pseudonocardia dioxanivorans CB1190 10361830 YP_004330163.1 CDS Psed_0028 NC_015312.1 27406 28992 R PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit complement(27406..28992) Pseudonocardia dioxanivorans CB1190 10361831 YP_004330164.1 CDS Psed_0029 NC_015312.1 29105 29545 D hypothetical protein 29105..29545 Pseudonocardia dioxanivorans CB1190 10361832 YP_004330165.1 CDS Psed_0030 NC_015312.1 29542 29904 D hypothetical protein 29542..29904 Pseudonocardia dioxanivorans CB1190 10361833 YP_004330166.1 CDS Psed_0031 NC_015312.1 29901 31760 D KEGG: kfl:Kfla_2184 type IV secretory pathway VirD4 protein-like protein; type IV secretory pathway VirD4 protein-like protein 29901..31760 Pseudonocardia dioxanivorans CB1190 10361834 YP_004330167.1 CDS Psed_0032 NC_015312.1 31852 32511 D KEGG: kfl:Kfla_2188 hypothetical protein; hypothetical protein 31852..32511 Pseudonocardia dioxanivorans CB1190 10361835 YP_004330168.1 CDS Psed_0033 NC_015312.1 32508 32909 D hypothetical protein 32508..32909 Pseudonocardia dioxanivorans CB1190 10361836 YP_004330169.1 CDS Psed_0034 NC_015312.1 32906 33823 D KEGG: mlu:Mlut_00270 hypothetical protein; hypothetical protein 32906..33823 Pseudonocardia dioxanivorans CB1190 10361837 YP_004330170.1 CDS Psed_0035 NC_015312.1 34056 38453 D PFAM: TrwC relaxase; KEGG: kfl:Kfla_2190 TrwC relaxase; TrwC relaxase 34056..38453 Pseudonocardia dioxanivorans CB1190 10361838 YP_004330171.1 CDS Psed_0036 NC_015312.1 38992 40461 D KEGG: stp:Strop_4139 RNA-directed DNA polymerase; PFAM: Reverse transcriptase; Group II intron, maturase-specific; RNA-directed DNA polymerase 38992..40461 Pseudonocardia dioxanivorans CB1190 10361839 YP_004330172.1 CDS Psed_0037 NC_015312.1 40461 40649 D hypothetical protein 40461..40649 Pseudonocardia dioxanivorans CB1190 10361840 YP_004330173.1 CDS Psed_0038 NC_015312.1 41442 41780 R KEGG: stp:Strop_2011 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(41442..41780) Pseudonocardia dioxanivorans CB1190 10361841 YP_004330174.1 CDS Psed_0039 NC_015312.1 41885 43894 D TIGRFAM: ATPase, P-type, heavy metal translocating; KEGG: ami:Amir_4284 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 41885..43894 Pseudonocardia dioxanivorans CB1190 10361842 YP_004330175.1 CDS Psed_0040 NC_015312.1 44373 45707 D KEGG: ttr:Tter_2338 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; MgtE integral membrane protein 44373..45707 Pseudonocardia dioxanivorans CB1190 10361843 YP_004330176.1 CDS Psed_0041 NC_015312.1 45778 47082 D PFAM: Natural resistance-associated macrophage protein; KEGG: ttr:Tter_2339 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 45778..47082 Pseudonocardia dioxanivorans CB1190 10361844 YP_004330177.1 CDS Psed_0042 NC_015312.1 47852 48400 R KEGG: mgi:Mflv_1496 hypothetical protein; hypothetical protein complement(47852..48400) Pseudonocardia dioxanivorans CB1190 10361845 YP_004330178.1 CDS Psed_0043 NC_015312.1 49081 50421 D KEGG: amd:AMED_8638 UDP-N-acetylmuramyl tripeptide synthase; manually curated; PFAM: Domain of unknown function DUF1727; Mur ligase, central; hypothetical protein 49081..50421 Pseudonocardia dioxanivorans CB1190 10361846 YP_004330179.1 CDS Psed_0044 NC_015312.1 50451 51206 D PFAM: CobB/CobQ-like glutamine amidotransferase; KEGG: tpr:Tpau_4003 CobB/CobQ domain protein glutamine amidotransferase; CobB/CobQ domain-containing protein glutamine amidotransferase 50451..51206 Pseudonocardia dioxanivorans CB1190 10361847 YP_004330180.1 CDS Psed_0045 NC_015312.1 51369 51908 R hypothetical protein complement(51369..51908) Pseudonocardia dioxanivorans CB1190 10361848 YP_004330181.1 CDS Psed_0046 NC_015312.1 52457 52735 D KEGG: rop:ROP_41980 hypothetical membrane protein; hypothetical protein 52457..52735 Pseudonocardia dioxanivorans CB1190 10361849 YP_004330182.1 CDS Psed_0048 NC_015312.1 53643 54872 D KEGG: gob:Gobs_3530 transposase; transposase 53643..54872 Pseudonocardia dioxanivorans CB1190 10361851 YP_004330183.1 CDS Psed_0049 NC_015312.1 55050 56279 D KEGG: gob:Gobs_3530 transposase; transposase 55050..56279 Pseudonocardia dioxanivorans CB1190 10361852 YP_004330184.1 CDS Psed_0050 NC_015312.1 56460 57737 D PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 56460..57737 Pseudonocardia dioxanivorans CB1190 10361853 YP_004330185.1 CDS Psed_0051 NC_015312.1 57937 59517 R KEGG: amd:AMED_7688 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator complement(57937..59517) Pseudonocardia dioxanivorans CB1190 10361854 YP_004330186.1 CDS Psed_0052 NC_015312.1 59565 59984 R KEGG: ami:Amir_0798 sec-independent translocase; manually curated; TIGRFAM: Twin-arginine translocation protein TatB; twin-arginine translocation protein subunit TatB complement(59565..59984) Pseudonocardia dioxanivorans CB1190 10361855 YP_004330187.1 CDS Psed_0054 NC_015312.1 60331 61167 R KEGG: fra:Francci3_2368 zinc/iron permease; zinc/iron permease complement(60331..61167) Pseudonocardia dioxanivorans CB1190 10361857 YP_004330188.1 CDS Psed_0055 NC_015312.1 61752 65753 D SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Non-ribosomal peptide synthetase C-terminal; Amino acid adenylation; KEGG: req:REQ_05560 non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Bacterial transferase hexapeptide repeat; non-ribosomal peptide synthetase domain-containing protein 61752..65753 Pseudonocardia dioxanivorans CB1190 10361858 YP_004330189.1 CDS Psed_0056 NC_015312.1 65863 67650 D KEGG: rha:RHA1_ro01089 cell division protein, FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 65863..67650 Pseudonocardia dioxanivorans CB1190 10361859 YP_004330190.1 CDS Psed_0057 NC_015312.1 67660 68691 R PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: amd:AMED_1208 hypothetical protein; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein complement(67660..68691) Pseudonocardia dioxanivorans CB1190 10361860 YP_004330191.1 CDS Psed_0058 NC_015312.1 68882 69658 D KEGG: nml:Namu_2480 hypothetical protein; hypothetical protein 68882..69658 Pseudonocardia dioxanivorans CB1190 10361861 YP_004330192.1 CDS Psed_0059 NC_015312.1 69730 70041 D KEGG: nml:Namu_2159 twin-arginine translocation protein, TatB subunit; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; twin-arginine translocation protein subunit TatB 69730..70041 Pseudonocardia dioxanivorans CB1190 10361862 YP_004330193.1 CDS Psed_0061 NC_015312.1 70695 71879 R PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit complement(70695..71879) Pseudonocardia dioxanivorans CB1190 10361864 YP_004330194.1 CDS Psed_0062 NC_015312.1 72240 73442 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: fri:FraEuI1c_1501 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 72240..73442 Pseudonocardia dioxanivorans CB1190 10361865 YP_004330195.1 CDS Psed_0064 NC_015312.1 75439 77016 R KEGG: sro:Sros_2709 membrane protein-like protein; hypothetical protein complement(75439..77016) Pseudonocardia dioxanivorans CB1190 10361867 YP_004330196.1 CDS Psed_0065 NC_015312.1 77188 78543 D PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: sgr:SGR_4241 FAD-dependent oxygenase; FAD linked oxidase domain-containing protein 77188..78543 Pseudonocardia dioxanivorans CB1190 10361868 YP_004330197.1 CDS Psed_0066 NC_015312.1 78637 81444 D KEGG: nml:Namu_4693 winged helix family transcriptional regulator; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; NB-ARC; SMART: Signal transduction response regulator, C-terminal; ATPase, AAA+ type, core; winged helix family transcriptional regulator 78637..81444 Pseudonocardia dioxanivorans CB1190 10361869 YP_004330198.1 CDS Psed_0067 NC_015312.1 81555 82061 D PFAM: Uncharacterised conserved protein UCP014873, membrane associated; KEGG: nfa:nfa32860 hypothetical protein; hypothetical protein 81555..82061 Pseudonocardia dioxanivorans CB1190 10361870 YP_004330199.1 CDS Psed_0068 NC_015312.1 82058 83578 D KEGG: mex:Mext_3068 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 82058..83578 Pseudonocardia dioxanivorans CB1190 10361871 YP_004330200.1 CDS Psed_0069 NC_015312.1 83739 84473 D KEGG: amd:AMED_3321 ArsR family transcriptional regulator; PFAM: Protein-tyrosine phosphatase, low molecular weight; HTH transcriptional regulator, ArsR; SMART: Protein-tyrosine phosphatase, low molecular weight; HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 83739..84473 Pseudonocardia dioxanivorans CB1190 10361872 YP_004330201.1 CDS Psed_0070 NC_015312.1 84470 84844 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amd:AMED_3320 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 84470..84844 Pseudonocardia dioxanivorans CB1190 10361873 YP_004330202.1 CDS Psed_0071 NC_015312.1 85198 86553 R PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro10195 4-hydroxybenzoate transporter; major facilitator superfamily protein complement(85198..86553) Pseudonocardia dioxanivorans CB1190 10361874 YP_004330203.1 CDS Psed_0072 NC_015312.1 86550 87254 R KEGG: rha:RHA1_ro07102 hypothetical protein; hypothetical protein complement(86550..87254) Pseudonocardia dioxanivorans CB1190 10361875 YP_004330204.1 CDS Psed_0073 NC_015312.1 87341 88348 R KEGG: rha:RHA1_ro10196 ferredoxin--NAD(+) reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin; ferredoxin--NAD(+) reductase complement(87341..88348) Pseudonocardia dioxanivorans CB1190 10361876 YP_004330205.1 CDS Psed_0074 NC_015312.1 88345 89307 R KEGG: rha:RHA1_ro10197 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(88345..89307) Pseudonocardia dioxanivorans CB1190 10361877 YP_004330206.1 CDS Psed_0075 NC_015312.1 89304 89768 R PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: rha:RHA1_ro10198 aromatic ring dioxygenase beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta complement(89304..89768) Pseudonocardia dioxanivorans CB1190 10361878 YP_004330207.1 CDS Psed_0077 NC_015312.1 91241 91993 D TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: rha:RHA1_ro10200 IclR family transcriptional regulator; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 91241..91993 Pseudonocardia dioxanivorans CB1190 10361880 YP_004330208.1 CDS Psed_0078 NC_015312.1 92079 92834 R PFAM: Methyltransferase type 12; KEGG: nfa:nfa21360 hypothetical protein; type 12 methyltransferase complement(92079..92834) Pseudonocardia dioxanivorans CB1190 10361881 YP_004330209.1 CDS Psed_0079 NC_015312.1 92939 94462 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sen:SACE_6324 peptide ABC transporter peptide-binding protein; ABC transporter substrate-binding protein 92939..94462 Pseudonocardia dioxanivorans CB1190 10361882 YP_004330210.1 CDS Psed_0080 NC_015312.1 94459 95400 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_5744 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 94459..95400 Pseudonocardia dioxanivorans CB1190 10361883 YP_004330211.1 CDS Psed_0081 NC_015312.1 95397 96257 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_81881 transporter integral membrane protein; ABC transporter permease 95397..96257 Pseudonocardia dioxanivorans CB1190 10361884 YP_004330212.1 CDS Psed_0082 NC_015312.1 96254 97690 D PFAM: ABC transporter-like; KEGG: sro:Sros_5586 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 96254..97690 Pseudonocardia dioxanivorans CB1190 10361885 YP_004330213.1 CDS Psed_0083 NC_015312.1 97738 98370 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sro:Sros_0182 amino acid transporter LysE; lysine exporter protein LysE/YggA complement(97738..98370) Pseudonocardia dioxanivorans CB1190 10361886 YP_004330214.1 CDS Psed_0084 NC_015312.1 98478 98930 D KEGG: sco:SCO3361 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 98478..98930 Pseudonocardia dioxanivorans CB1190 10361887 YP_004330215.1 CDS Psed_0085 NC_015312.1 98980 99987 R KEGG: amd:AMED_4131 chemotaxis-specific methylesterase CheB; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; chemotaxis protein CheB complement(98980..99987) Pseudonocardia dioxanivorans CB1190 10361888 YP_004330216.1 CDS Psed_0086 NC_015312.1 100481 101236 D KEGG: bcv:Bcav_1669 ANTAR domain protein with unknown sensor; PFAM: ANTAR; GAF; SMART: GAF; ANTAR domain-containing protein 100481..101236 Pseudonocardia dioxanivorans CB1190 10361889 YP_004330217.1 CDS Psed_0087 NC_015312.1 101380 102042 D KEGG: tpr:Tpau_3922 hypothetical protein; hypothetical protein 101380..102042 Pseudonocardia dioxanivorans CB1190 10361890 YP_004330218.1 CDS Psed_0088 NC_015312.1 102303 102653 D PFAM: Protein of unknown function DUF485; KEGG: xce:Xcel_1074 protein of unknown function DUF485; hypothetical protein 102303..102653 Pseudonocardia dioxanivorans CB1190 10361891 YP_004330219.1 CDS Psed_0089 NC_015312.1 102650 104287 D KEGG: amd:AMED_1584 solute:Na+ symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter; SSS sodium solute transporter superfamily protein 102650..104287 Pseudonocardia dioxanivorans CB1190 10361892 YP_004330220.1 CDS Psed_0090 NC_015312.1 104353 105021 D KEGG: sco:SCO0406 hypothetical protein; hypothetical protein 104353..105021 Pseudonocardia dioxanivorans CB1190 10361893 YP_004330221.1 CDS Psed_0091 NC_015312.1 105008 106012 D KEGG: sro:Sros_4910 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; PBS lyase HEAT-like repeat; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 105008..106012 Pseudonocardia dioxanivorans CB1190 10361894 YP_004330222.1 CDS Psed_0092 NC_015312.1 106278 107246 D KEGG: rha:RHA1_ro05161 hypothetical protein; hypothetical protein 106278..107246 Pseudonocardia dioxanivorans CB1190 10361895 YP_004330223.1 CDS Psed_0093 NC_015312.1 107277 107624 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mil:ML5_1284 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 107277..107624 Pseudonocardia dioxanivorans CB1190 10361896 YP_004330224.1 CDS Psed_0094 NC_015312.1 107742 108164 D PFAM: YCII-related; KEGG: nfa:nfa38190 hypothetical protein; hypothetical protein 107742..108164 Pseudonocardia dioxanivorans CB1190 10361897 YP_004330225.1 CDS Psed_0095 NC_015312.1 108168 109448 D KEGG: nda:Ndas_2135 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 108168..109448 Pseudonocardia dioxanivorans CB1190 10361898 YP_004330226.1 CDS Psed_0096 NC_015312.1 109564 110244 D PFAM: Uncharacterised protein family UPF0126; KEGG: bcm:Bcenmc03_5111 hypothetical protein; hypothetical protein 109564..110244 Pseudonocardia dioxanivorans CB1190 10361899 YP_004330227.1 CDS Psed_0097 NC_015312.1 110267 110812 R PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: gob:Gobs_3191 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein complement(110267..110812) Pseudonocardia dioxanivorans CB1190 10361900 YP_004330228.1 CDS Psed_0098 NC_015312.1 110936 111685 R KEGG: sro:Sros_6337 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator complement(110936..111685) Pseudonocardia dioxanivorans CB1190 10361901 YP_004330229.1 CDS Psed_0099 NC_015312.1 111751 112362 D PFAM: MaoC-like dehydratase; KEGG: nca:Noca_4064 dehydratase; acyl dehydratase MaoC 111751..112362 Pseudonocardia dioxanivorans CB1190 10361902 YP_004330230.1 CDS Psed_0100 NC_015312.1 112503 113594 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: rxy:Rxyl_2379 zinc-binding alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; L-iditol 2-dehydrogenase 112503..113594 Pseudonocardia dioxanivorans CB1190 10361903 YP_004330231.1 CDS Psed_0101 NC_015312.1 113591 115027 D PFAM: MmgE/PrpD; KEGG: bur:Bcep18194_B1168 MmgE/PrpD family protein; MmgE/PrpD family protein 113591..115027 Pseudonocardia dioxanivorans CB1190 10361904 YP_004330232.1 CDS Psed_0102 NC_015312.1 114981 115199 R KEGG: ace:Acel_0074 hypothetical protein; hypothetical protein complement(114981..115199) Pseudonocardia dioxanivorans CB1190 10361905 YP_004330233.1 CDS Psed_0103 NC_015312.1 115262 115918 R PFAM: MT-A70; KEGG: ace:Acel_2063 MT-A70 family protein; MT-A70 family protein complement(115262..115918) Pseudonocardia dioxanivorans CB1190 10361906 YP_004330234.1 CDS Psed_0104 NC_015312.1 115915 116931 R KEGG: sen:SACE_7244 DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(115915..116931) Pseudonocardia dioxanivorans CB1190 10361907 YP_004330235.1 CDS Psed_0105 NC_015312.1 116982 118337 D PFAM: FAD linked oxidase, N-terminal; KEGG: sen:SACE_7243 FAD-dependent oxygenase; FAD linked oxidase domain-containing protein 116982..118337 Pseudonocardia dioxanivorans CB1190 10361908 YP_004330236.1 CDS Psed_0106 NC_015312.1 118734 119306 R KEGG: cur:cur_1817 Fe-S oxidoreductase; Fe-S oxidoreductase complement(118734..119306) Pseudonocardia dioxanivorans CB1190 10361909 YP_004330237.1 CDS Psed_0107 NC_015312.1 119547 120647 D KEGG: ami:Amir_0659 dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein; dipeptidylaminopeptidase/acylaminoacyl- peptidase-like protein 119547..120647 Pseudonocardia dioxanivorans CB1190 10361910 YP_004330238.1 CDS Psed_0108 NC_015312.1 120927 121361 R hypothetical protein complement(120927..121361) Pseudonocardia dioxanivorans CB1190 10361911 YP_004330239.1 CDS Psed_0109 NC_015312.1 121410 121952 D KEGG: gbr:Gbro_0020 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; peptidyl-prolyl isomerase 121410..121952 Pseudonocardia dioxanivorans CB1190 10361912 YP_004330240.1 CDS Psed_0110 NC_015312.1 121966 122820 D PFAM: Peptidase S54, rhomboid domain; KEGG: req:REQ_00180 serine peptidase; peptidase S54, rhomboid domain-containing protein 121966..122820 Pseudonocardia dioxanivorans CB1190 10361913 YP_004330241.1 CDS Psed_0111 NC_015312.1 122831 123325 R KEGG: saq:Sare_4994 hypothetical protein; hypothetical protein complement(122831..123325) Pseudonocardia dioxanivorans CB1190 10361914 YP_004330242.1 CDS Psed_0112 NC_015312.1 123402 123659 R PFAM: Uncharacterised protein family UPF0233; KEGG: svi:Svir_00290 septation inhibitor protein; hypothetical protein complement(123402..123659) Pseudonocardia dioxanivorans CB1190 10361915 YP_004330243.1 CDS Psed_0113 NC_015312.1 123780 124421 R TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: svi:Svir_00350 anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase complement(123780..124421) Pseudonocardia dioxanivorans CB1190 10361916 YP_004330244.1 CDS Psed_0114 NC_015312.1 124423 126354 R PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: ami:Amir_0021 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; PASTA; serine/threonine protein kinase with PASTA sensor(s) complement(124423..126354) Pseudonocardia dioxanivorans CB1190 10361917 YP_004330245.1 CDS Psed_0115 NC_015312.1 126463 129105 R PFAM: Serine/threonine-protein kinase-like domain; KEGG: ami:Amir_0022 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase complement(126463..129105) Pseudonocardia dioxanivorans CB1190 10361918 YP_004330246.1 CDS Psed_0116 NC_015312.1 129102 130571 R KEGG: req:REQ_00250 penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase complement(129102..130571) Pseudonocardia dioxanivorans CB1190 10361919 YP_004330247.1 CDS Psed_0117 NC_015312.1 130568 132031 R PFAM: Cell cycle protein; KEGG: nfa:nfa830 cell division protein; cell cycle protein complement(130568..132031) Pseudonocardia dioxanivorans CB1190 10361920 YP_004330248.1 CDS Psed_0118 NC_015312.1 132031 133428 R PFAM: Protein phosphatase 2C, N-terminal; KEGG: sen:SACE_0048 protein serine/threonine phosphatases; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase complement(132031..133428) Pseudonocardia dioxanivorans CB1190 10361921 YP_004330249.1 CDS Psed_0119 NC_015312.1 133544 134002 R KEGG: sen:SACE_0049 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; FHA domain-containing protein complement(133544..134002) Pseudonocardia dioxanivorans CB1190 10361922 YP_004330250.1 CDS Psed_0120 NC_015312.1 134058 135296 R KEGG: amd:AMED_0057 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; FHA domain-containing protein complement(134058..135296) Pseudonocardia dioxanivorans CB1190 10361923 YP_004330251.1 CDS Psed_0121 NC_015312.1 135592 136215 R KEGG: mil:ML5_5510 hypothetical protein; hypothetical protein complement(135592..136215) Pseudonocardia dioxanivorans CB1190 10361925 YP_004330252.1 CDS Psed_0122 NC_015312.1 136291 136557 R KEGG: kfl:Kfla_3461 hypothetical protein; hypothetical protein complement(136291..136557) Pseudonocardia dioxanivorans CB1190 10361926 YP_004330253.1 CDS Psed_0123 NC_015312.1 136648 137220 D PFAM: Carboxymuconolactone decarboxylase; KEGG: scb:SCAB_90371 hypothetical protein; carboxymuconolactone decarboxylase 136648..137220 Pseudonocardia dioxanivorans CB1190 10361927 YP_004330254.1 CDS Psed_0124 NC_015312.1 137272 138060 D KEGG: sen:SACE_6393 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 137272..138060 Pseudonocardia dioxanivorans CB1190 10361928 YP_004330255.1 CDS Psed_0125 NC_015312.1 138087 138983 R KEGG: svi:Svir_24560 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(138087..138983) Pseudonocardia dioxanivorans CB1190 10361929 YP_004330256.1 CDS Psed_0126 NC_015312.1 139003 140103 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: rxy:Rxyl_1586 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 139003..140103 Pseudonocardia dioxanivorans CB1190 10361930 YP_004330257.1 CDS Psed_0128 NC_015312.1 140871 141554 R KEGG: gob:Gobs_4382 haloacid dehalogenase I; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase; haloacid dehalogenase complement(140871..141554) Pseudonocardia dioxanivorans CB1190 10361932 YP_004330258.1 CDS Psed_0129 NC_015312.1 141678 142391 R PFAM: Domain of unknown function DUF59; KEGG: gob:Gobs_1749 hypothetical protein; hypothetical protein complement(141678..142391) Pseudonocardia dioxanivorans CB1190 10361933 YP_004330259.1 CDS Psed_0130 NC_015312.1 142426 143490 R PFAM: Amidohydrolase 2; KEGG: amd:AMED_4328 amidohydrolase; amidohydrolase complement(142426..143490) Pseudonocardia dioxanivorans CB1190 10361934 YP_004330260.1 CDS Psed_0131 NC_015312.1 143546 144574 R KEGG: gob:Gobs_1750 alcohol dehydrogenase GroES domain-containing protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES complement(143546..144574) Pseudonocardia dioxanivorans CB1190 10361935 YP_004330261.1 CDS Psed_0132 NC_015312.1 144817 145242 R PFAM: Limonene-1,2-epoxide hydrolase; KEGG: cai:Caci_4134 4-oxalocrotonate tautomerase; limonene-12-epoxide hydrolase complement(144817..145242) Pseudonocardia dioxanivorans CB1190 10361936 YP_004330262.1 CDS Psed_0133 NC_015312.1 145358 147172 R KEGG: sen:SACE_5343 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(145358..147172) Pseudonocardia dioxanivorans CB1190 10361937 YP_004330263.1 CDS Psed_0134 NC_015312.1 147188 147721 D KEGG: ami:Amir_0304 hypothetical protein; hypothetical protein 147188..147721 Pseudonocardia dioxanivorans CB1190 10361938 YP_004330264.1 CDS Psed_0135 NC_015312.1 147733 148389 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: tfu:Tfu_2676 hypothetical protein; NAD-dependent epimerase/dehydratase 147733..148389 Pseudonocardia dioxanivorans CB1190 10361939 YP_004330265.1 CDS Psed_0136 NC_015312.1 148386 149798 D KEGG: kra:Krad_4083 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 148386..149798 Pseudonocardia dioxanivorans CB1190 10361940 YP_004330266.1 CDS Psed_0137 NC_015312.1 149819 150799 R PFAM: Copper resistance D; KEGG: sen:SACE_0677 copper resistance transporter; copper resistance D domain-containing protein complement(149819..150799) Pseudonocardia dioxanivorans CB1190 10361941 YP_004330267.1 CDS Psed_0138 NC_015312.1 150813 151361 R PFAM: Copper resistance protein CopC, core; KEGG: sen:SACE_0073 copper resistance protein; copper resistance protein CopC complement(150813..151361) Pseudonocardia dioxanivorans CB1190 10361942 YP_004330268.1 CDS Psed_0139 NC_015312.1 151358 152134 R PFAM: GLE1, N-terminal, bacteria; KEGG: sen:SACE_0074 hypothetical protein; nuclear export factor GLE1 complement(151358..152134) Pseudonocardia dioxanivorans CB1190 10361943 YP_004330269.1 CDS Psed_0140 NC_015312.1 152202 152702 R KEGG: amd:AMED_0095 hypothetical protein; hypothetical protein complement(152202..152702) Pseudonocardia dioxanivorans CB1190 10361944 YP_004330270.1 CDS Psed_0141 NC_015312.1 152885 153592 R KEGG: rer:RER_01330 hypothetical protein; hypothetical protein complement(152885..153592) Pseudonocardia dioxanivorans CB1190 10361945 YP_004330271.1 CDS Psed_0142 NC_015312.1 153695 155452 D TIGRFAM: RecB family nuclease, TM0106, KEGG: ami:Amir_0046 nuclease (RecB family)-like protein; RecB family nuclease 153695..155452 Pseudonocardia dioxanivorans CB1190 10361946 YP_004330272.1 CDS Psed_0143 NC_015312.1 155585 156886 D TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: sen:SACE_5565 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 155585..156886 Pseudonocardia dioxanivorans CB1190 10361947 YP_004330273.1 CDS Psed_0144 NC_015312.1 157253 157804 D KEGG: sen:SACE_2073 methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 157253..157804 Pseudonocardia dioxanivorans CB1190 10361948 YP_004330274.1 CDS Psed_0145 NC_015312.1 157893 158696 R KEGG: sen:SACE_7200 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein complement(157893..158696) Pseudonocardia dioxanivorans CB1190 10361949 YP_004330275.1 CDS Psed_0146 NC_015312.1 158693 161581 R KEGG: amd:AMED_9128 MFS transporter, multidrug efflux transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; Collagen-binding surface protein Cna-like, B-type domain; EmrB/QacA subfamily drug resistance transporter complement(158693..161581) Pseudonocardia dioxanivorans CB1190 10361950 YP_004330276.1 CDS Psed_0147 NC_015312.1 161581 162117 R KEGG: ami:Amir_0305 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(161581..162117) Pseudonocardia dioxanivorans CB1190 10361951 YP_004330277.1 CDS Psed_0148 NC_015312.1 162371 162913 D PFAM: Cupin 2, conserved barrel; KEGG: msm:MSMEG_0644 cupin domain-containing protein; cupin 162371..162913 Pseudonocardia dioxanivorans CB1190 10361952 YP_004330278.1 CDS Psed_0149 NC_015312.1 163002 163448 D KEGG: amd:AMED_0129 hypothetical protein; hypothetical protein 163002..163448 Pseudonocardia dioxanivorans CB1190 10361953 YP_004330279.1 CDS Psed_0150 NC_015312.1 163448 164323 D PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: mpa:MAP0889 hypothetical protein; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-formamidopyrimidine glycosylase 163448..164323 Pseudonocardia dioxanivorans CB1190 10361954 YP_004330280.1 CDS Psed_0151 NC_015312.1 164334 165542 D KEGG: sen:SACE_0115 sensor kinase, two-component system; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; signal transduction histidine kinase LytS 164334..165542 Pseudonocardia dioxanivorans CB1190 10361955 YP_004330281.1 CDS Psed_0152 NC_015312.1 165618 166499 D PFAM: Peptidase S49; KEGG: amd:AMED_0132 serine protease; peptidase S49 165618..166499 Pseudonocardia dioxanivorans CB1190 10361956 YP_004330282.1 CDS Psed_0153 NC_015312.1 166668 167534 D KEGG: mil:ML5_6160 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; LytTR family two component transcriptional regulator 166668..167534 Pseudonocardia dioxanivorans CB1190 10361957 YP_004330283.1 CDS Psed_0154 NC_015312.1 167641 169197 D KEGG: rha:RHA1_ro05042 hypothetical protein; hypothetical protein 167641..169197 Pseudonocardia dioxanivorans CB1190 10361958 YP_004330284.1 CDS Psed_0155 NC_015312.1 169204 170943 D PFAM: Sodium/solute symporter; KEGG: rop:ROP_51070 SSS family transporter; Na+/solute symporter 169204..170943 Pseudonocardia dioxanivorans CB1190 10361959 YP_004330285.1 CDS Psed_0156 NC_015312.1 170940 172682 D PFAM: Sodium/solute symporter; KEGG: rha:RHA1_ro05043 sodium:solute symporter, SSF; Na+/solute symporter 170940..172682 Pseudonocardia dioxanivorans CB1190 10361960 YP_004330286.1 CDS Psed_0157 NC_015312.1 172734 173063 D KEGG: nml:Namu_0213 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 172734..173063 Pseudonocardia dioxanivorans CB1190 10361961 YP_004330287.1 CDS Psed_0158 NC_015312.1 173294 174355 D KEGG: ami:Amir_0075 hypothetical protein; hypothetical protein 173294..174355 Pseudonocardia dioxanivorans CB1190 10361962 YP_004330288.1 CDS Psed_0159 NC_015312.1 174393 175340 D PFAM: FAD-binding 9, siderophore-interacting; SEC-C motif; KEGG: ami:Amir_0079 sec-C motif domain protein; FAD-binding 9 siderophore-interacting domain-containing protein 174393..175340 Pseudonocardia dioxanivorans CB1190 10361963 YP_004330289.1 CDS Psed_0160 NC_015312.1 175420 176355 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tcu:Tcur_0098 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 175420..176355 Pseudonocardia dioxanivorans CB1190 10361964 YP_004330290.1 CDS Psed_0161 NC_015312.1 176489 177307 R PFAM: Abortive infection protein; KEGG: sen:SACE_0132 abortive infection protein; abortive infection protein complement(176489..177307) Pseudonocardia dioxanivorans CB1190 10361965 YP_004330291.1 CDS Psed_0162 NC_015312.1 177366 177809 D KEGG: sen:SACE_6354 hypothetical protein; hypothetical protein 177366..177809 Pseudonocardia dioxanivorans CB1190 10361966 YP_004330292.1 CDS Psed_0163 NC_015312.1 177861 178211 D KEGG: gob:Gobs_3347 hypothetical protein; hypothetical protein 177861..178211 Pseudonocardia dioxanivorans CB1190 10361967 YP_004330293.1 CDS Psed_0164 NC_015312.1 178233 179060 R KEGG: ami:Amir_0086 hypothetical protein; hypothetical protein complement(178233..179060) Pseudonocardia dioxanivorans CB1190 10361968 YP_004330294.1 CDS Psed_0165 NC_015312.1 179182 180066 D KEGG: ami:Amir_0089 hypothetical protein; hypothetical protein 179182..180066 Pseudonocardia dioxanivorans CB1190 10361969 YP_004330295.1 CDS Psed_0166 NC_015312.1 180288 181235 D KEGG: gob:Gobs_0268 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Prephenate dehydratase 180288..181235 Pseudonocardia dioxanivorans CB1190 10361970 YP_004330296.1 CDS Psed_0167 NC_015312.1 181232 182026 D KEGG: sen:SACE_0153 2,3-PDG dependent phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 181232..182026 Pseudonocardia dioxanivorans CB1190 10361971 YP_004330297.1 CDS Psed_0168 NC_015312.1 182051 182401 R PFAM: Protein of unknown function DUF1025; KEGG: ami:Amir_0112 protein of unknown function DUF1025; hypothetical protein complement(182051..182401) Pseudonocardia dioxanivorans CB1190 10361972 YP_004330298.1 CDS Psed_0169 NC_015312.1 182415 183638 R KEGG: sen:SACE_0155 secreted protein; hypothetical protein complement(182415..183638) Pseudonocardia dioxanivorans CB1190 10361973 YP_004330299.1 CDS Psed_0170 NC_015312.1 183765 184451 D KEGG: ami:Amir_0114 hypothetical protein; hypothetical protein 183765..184451 Pseudonocardia dioxanivorans CB1190 10361974 YP_004330300.1 CDS Psed_0171 NC_015312.1 184452 185618 D KEGG: sen:SACE_0157 hypothetical protein; PFAM: Glutathionylspermidine synthase; Trypanothione synthase 184452..185618 Pseudonocardia dioxanivorans CB1190 10361975 YP_004330301.1 CDS Psed_0172 NC_015312.1 185642 186094 D PFAM: Protein of unknown function DUF350; KEGG: ami:Amir_0116 protein of unknown function DUF350; hypothetical protein 185642..186094 Pseudonocardia dioxanivorans CB1190 10361976 YP_004330302.1 CDS Psed_0173 NC_015312.1 186133 186981 D KEGG: msm:MSMEG_6407 Cof-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3; HAD-superfamily hydrolase 186133..186981 Pseudonocardia dioxanivorans CB1190 10361977 YP_004330303.1 CDS Psed_0174 NC_015312.1 187068 187715 D KEGG: sen:SACE_0167 membrane-associated phospholipid phosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 187068..187715 Pseudonocardia dioxanivorans CB1190 10361978 YP_004330304.1 CDS Psed_0175 NC_015312.1 187741 188661 D PFAM: UbiA prenyltransferase; KEGG: amd:AMED_0226 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; UbiA prenyltransferase 187741..188661 Pseudonocardia dioxanivorans CB1190 10361979 YP_004330305.1 CDS Psed_0176 NC_015312.1 188671 189582 D TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: nml:Namu_4180 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 188671..189582 Pseudonocardia dioxanivorans CB1190 10361980 YP_004330306.1 CDS Psed_0177 NC_015312.1 189579 190553 D TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: svi:Svir_06090 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 189579..190553 Pseudonocardia dioxanivorans CB1190 10361981 YP_004330307.1 CDS Psed_0179 NC_015312.1 191929 192624 D PFAM: Methyltransferase type 12; KEGG: rer:RER_02530 hypothetical protein; type 12 methyltransferase 191929..192624 Pseudonocardia dioxanivorans CB1190 10361983 YP_004330308.1 CDS Psed_0180 NC_015312.1 192621 193391 D PFAM: Glycosyl transferase, family 2; KEGG: cmi:CMM_2310 glycosyl transferase; family 2 glycosyl transferase 192621..193391 Pseudonocardia dioxanivorans CB1190 10361984 YP_004330309.1 CDS Psed_0181 NC_015312.1 193391 193804 D KEGG: art:Arth_2682 hypothetical protein; hypothetical protein 193391..193804 Pseudonocardia dioxanivorans CB1190 10361985 YP_004330310.1 CDS Psed_0182 NC_015312.1 193829 194866 R PFAM: Glycosyl transferase, family 2; KEGG: ske:Sked_08990 glycosyltransferase; family 2 glycosyl transferase complement(193829..194866) Pseudonocardia dioxanivorans CB1190 10361986 YP_004330311.1 CDS Psed_0183 NC_015312.1 194863 196152 R KEGG: cai:Caci_0997 hypothetical protein; hypothetical protein complement(194863..196152) Pseudonocardia dioxanivorans CB1190 10361987 YP_004330312.1 CDS Psed_0184 NC_015312.1 196206 198311 R KEGG: amd:AMED_0223 hypothetical protein; hypothetical protein complement(196206..198311) Pseudonocardia dioxanivorans CB1190 10361988 YP_004330313.1 CDS Psed_0185 NC_015312.1 198424 199617 D TIGRFAM: UDP-galactopyranose mutase; KEGG: svi:Svir_01310 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase, C-terminal; FAD dependent oxidoreductase; UDP-galactopyranose mutase 198424..199617 Pseudonocardia dioxanivorans CB1190 10361989 YP_004330314.1 CDS Psed_0186 NC_015312.1 199766 201487 D KEGG: svi:Svir_28170 hypothetical protein; hypothetical protein 199766..201487 Pseudonocardia dioxanivorans CB1190 10361990 YP_004330315.1 CDS Psed_0187 NC_015312.1 201621 203609 D KEGG: sen:SACE_5734 galactofuranosyl transferase; galactofuranosyl transferase 201621..203609 Pseudonocardia dioxanivorans CB1190 10361991 YP_004330316.1 CDS Psed_0188 NC_015312.1 203688 205625 R KEGG: svi:Svir_01420 predicted glycosyltransferase; glycosyltransferase complement(203688..205625) Pseudonocardia dioxanivorans CB1190 10361992 YP_004330317.1 CDS Psed_0189 NC_015312.1 205823 208810 R PFAM: Mycobacterial cell wall arabinan synthesis protein; KEGG: sen:SACE_5736 arabinosyl transferase; cell wall arabinan synthesis protein complement(205823..208810) Pseudonocardia dioxanivorans CB1190 10361993 YP_004330318.1 CDS Psed_0190 NC_015312.1 209040 210443 D PFAM: Acyltransferase 3; KEGG: gob:Gobs_4357 acyltransferase 3; acyltransferase 209040..210443 Pseudonocardia dioxanivorans CB1190 10361994 YP_004330319.1 CDS Psed_0191 NC_015312.1 210495 211154 D hypothetical protein 210495..211154 Pseudonocardia dioxanivorans CB1190 10361995 YP_004330320.1 CDS Psed_0192 NC_015312.1 211154 211819 D PFAM: Nitroreductase-like; KEGG: gbr:Gbro_1352 nitroreductase; nitroreductase 211154..211819 Pseudonocardia dioxanivorans CB1190 10361996 YP_004330321.1 CDS Psed_0193 NC_015312.1 211939 213945 D KEGG: art:Arth_2686 hypothetical protein; hypothetical protein 211939..213945 Pseudonocardia dioxanivorans CB1190 10361997 YP_004330322.1 CDS Psed_0194 NC_015312.1 213986 214741 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_0229 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(213986..214741) Pseudonocardia dioxanivorans CB1190 10361998 YP_004330323.1 CDS Psed_0195 NC_015312.1 214745 216118 R PFAM: FAD linked oxidase, N-terminal; D-arabinono-1,4-lactone oxidase; KEGG: sen:SACE_0195 FAD linked oxidoreductase; FAD linked oxidase domain-containing protein complement(214745..216118) Pseudonocardia dioxanivorans CB1190 10361999 YP_004330324.1 CDS Psed_0196 NC_015312.1 216293 218053 D KEGG: fra:Francci3_0362 hypothetical protein; hypothetical protein 216293..218053 Pseudonocardia dioxanivorans CB1190 10362000 YP_004330325.1 CDS Psed_0197 NC_015312.1 218086 218697 D PFAM: Protein of unknown function DUF1707; KEGG: sro:Sros_0038 hypothetical protein; hypothetical protein 218086..218697 Pseudonocardia dioxanivorans CB1190 10362001 YP_004330326.1 CDS Psed_0198 NC_015312.1 218725 219474 R PFAM: ABC-2 type transporter; KEGG: ske:Sked_36170 multidrug ABC transporter permease; ABC transporter complement(218725..219474) Pseudonocardia dioxanivorans CB1190 10362002 YP_004330327.1 CDS Psed_0199 NC_015312.1 219471 220394 R PFAM: ABC transporter-like; KEGG: mil:ML5_0344 abc transporter related protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase complement(219471..220394) Pseudonocardia dioxanivorans CB1190 10362003 YP_004330328.1 CDS Psed_0200 NC_015312.1 220391 220750 R KEGG: amd:AMED_1510 MarR family transcriptional regulator; MarR family transcriptional regulator complement(220391..220750) Pseudonocardia dioxanivorans CB1190 10362004 YP_004330329.1 CDS Psed_0201 NC_015312.1 220747 221394 R KEGG: bcv:Bcav_4027 hypothetical protein; hypothetical protein complement(220747..221394) Pseudonocardia dioxanivorans CB1190 10362005 YP_004330330.1 CDS Psed_0202 NC_015312.1 221619 224291 D KEGG: gob:Gobs_1678 ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 221619..224291 Pseudonocardia dioxanivorans CB1190 10362006 YP_004330331.1 CDS Psed_0203 NC_015312.1 224497 224718 D KEGG: gob:Gobs_1989 hypothetical protein; hypothetical protein 224497..224718 Pseudonocardia dioxanivorans CB1190 10362007 YP_004330332.1 CDS Psed_0204 NC_015312.1 224740 225459 D KEGG: gob:Gobs_1683 hypothetical protein; hypothetical protein 224740..225459 Pseudonocardia dioxanivorans CB1190 10362008 YP_004330333.1 CDS Psed_0205 NC_015312.1 225608 226048 D PFAM: GtrA-like protein; KEGG: svi:Svir_01410 predicted membrane protein; GtrA family protein 225608..226048 Pseudonocardia dioxanivorans CB1190 10362009 YP_004330334.1 CDS Psed_0206 NC_015312.1 226056 226970 R PFAM: Glycosyl transferase, family 2; KEGG: amd:AMED_0238 glycosyltransferase; family 2 glycosyl transferase complement(226056..226970) Pseudonocardia dioxanivorans CB1190 10362010 YP_004330335.1 CDS Psed_0207 NC_015312.1 226967 227737 R PFAM: ABC transporter-like; KEGG: sen:SACE_0200 ABC transport system, ATP-binding protein; SMART: ATPase, AAA+ type, core; teichoic-acid-transporting AtPase complement(226967..227737) Pseudonocardia dioxanivorans CB1190 10362011 YP_004330336.1 CDS Psed_0208 NC_015312.1 227742 228557 R PFAM: ABC-2 type transporter; KEGG: gob:Gobs_4323 ABC-2 type transporter; ABC transporter complement(227742..228557) Pseudonocardia dioxanivorans CB1190 10362012 YP_004330337.1 CDS Psed_0209 NC_015312.1 228750 229304 R PFAM: Protein of unknown function DUF2587; KEGG: ami:Amir_0135 hypothetical protein; hypothetical protein complement(228750..229304) Pseudonocardia dioxanivorans CB1190 10362013 YP_004330338.1 CDS Psed_0210 NC_015312.1 229354 230373 R SMART: Polyketide synthase, enoylreductase; TIGRFAM: Quinone oxidoreductase , PIG3; KEGG: rop:ROP_39810 oxidoreductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; NAD(P)H quinone oxidoreductase complement(229354..230373) Pseudonocardia dioxanivorans CB1190 10362014 YP_004330339.1 CDS Psed_0211 NC_015312.1 230383 231030 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ami:Amir_0140 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 230383..231030 Pseudonocardia dioxanivorans CB1190 10362015 YP_004330340.1 CDS Psed_0212 NC_015312.1 231040 231999 R PFAM: Uncharacterised protein family, zinc metallopeptidase KEGG: amd:AMED_0245 metallopeptidase; hypothetical protein complement(231040..231999) Pseudonocardia dioxanivorans CB1190 10362016 YP_004330341.1 CDS Psed_0213 NC_015312.1 232096 232584 D KEGG: ami:Amir_0144 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 232096..232584 Pseudonocardia dioxanivorans CB1190 10362017 YP_004330342.1 CDS Psed_0214 NC_015312.1 232685 233575 R PFAM: Alpha/beta hydrolase fold-1; KEGG: fri:FraEuI1c_5356 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(232685..233575) Pseudonocardia dioxanivorans CB1190 10362019 YP_004330343.1 CDS Psed_0215 NC_015312.1 233569 234120 R KEGG: azl:AZL_012780 flavin reductase; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein complement(233569..234120) Pseudonocardia dioxanivorans CB1190 10362020 YP_004330344.1 CDS Psed_0216 NC_015312.1 234117 235598 R TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; KEGG: gtn:GTNG_3160 aromatic compound hydroxylase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit complement(234117..235598) Pseudonocardia dioxanivorans CB1190 10362021 YP_004330345.1 CDS Psed_0217 NC_015312.1 235595 236563 R KEGG: amd:AMED_5706 2,3-dihydroxyphenylpropionate 1,2-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; 3-carboxyethylcatechol 2,3-dioxygenase complement(235595..236563) Pseudonocardia dioxanivorans CB1190 10362022 YP_004330346.1 CDS Psed_0218 NC_015312.1 236592 237125 R KEGG: swi:Swit_1555 hypothetical protein; hypothetical protein complement(236592..237125) Pseudonocardia dioxanivorans CB1190 10362023 YP_004330347.1 CDS Psed_0219 NC_015312.1 237283 238017 R KEGG: cai:Caci_6492 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(237283..238017) Pseudonocardia dioxanivorans CB1190 10362024 YP_004330348.1 CDS Psed_0220 NC_015312.1 238014 239216 R KEGG: sco:SCO3636 cytochrome P-450 hydroxylase; PFAM: Cytochrome P450; peroxidase complement(238014..239216) Pseudonocardia dioxanivorans CB1190 10362025 YP_004330349.1 CDS Psed_0221 NC_015312.1 239347 241119 D KEGG: nml:Namu_4896 transcriptional regulator CdaR; transcriptional regulator CdaR 239347..241119 Pseudonocardia dioxanivorans CB1190 10362026 YP_004330350.1 CDS Psed_0222 NC_015312.1 241130 241690 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fri:FraEuI1c_3930 regulatory protein TetR; TetR family transcriptional regulator complement(241130..241690) Pseudonocardia dioxanivorans CB1190 10362027 YP_004330351.1 CDS Psed_0223 NC_015312.1 241790 242686 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: fri:FraEuI1c_3929 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 241790..242686 Pseudonocardia dioxanivorans CB1190 10362028 YP_004330352.1 CDS Psed_0224 NC_015312.1 242668 243063 R KEGG: sna:Snas_2024 hypothetical protein; hypothetical protein complement(242668..243063) Pseudonocardia dioxanivorans CB1190 10362029 YP_004330353.1 CDS Psed_0225 NC_015312.1 243073 243777 R PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: sen:SACE_2030 peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(243073..243777) Pseudonocardia dioxanivorans CB1190 10362030 YP_004330354.1 CDS Psed_0226 NC_015312.1 243855 244469 D KEGG: gob:Gobs_1121 hypothetical protein; hypothetical protein 243855..244469 Pseudonocardia dioxanivorans CB1190 10362031 YP_004330355.1 CDS Psed_0227 NC_015312.1 244384 244989 R KEGG: rop:ROP_51490 hypothetical protein; hypothetical protein complement(244384..244989) Pseudonocardia dioxanivorans CB1190 10362032 YP_004330356.1 CDS Psed_0228 NC_015312.1 245104 245550 R PFAM: Protein of unknown function DUF1905; KEGG: rha:RHA1_ro06736 hypothetical protein; hypothetical protein complement(245104..245550) Pseudonocardia dioxanivorans CB1190 10362033 YP_004330357.1 CDS Psed_0229 NC_015312.1 245776 247029 R KEGG: sgr:SGR_3783 aminopeptidase 2; PFAM: Peptidase M18; aspartyl aminopeptidase complement(245776..247029) Pseudonocardia dioxanivorans CB1190 10362034 YP_004330358.1 CDS Psed_0230 NC_015312.1 247030 248481 D KEGG: gob:Gobs_4747 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; choline dehydrogenase 247030..248481 Pseudonocardia dioxanivorans CB1190 10362035 YP_004330359.1 CDS Psed_0231 NC_015312.1 248478 250511 D KEGG: svi:Svir_19990 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 248478..250511 Pseudonocardia dioxanivorans CB1190 10362036 YP_004330360.1 CDS Psed_0232 NC_015312.1 251070 251801 D KEGG: bge:BC1002_2527 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; winged helix family two component transcriptional regulator 251070..251801 Pseudonocardia dioxanivorans CB1190 10362037 YP_004330361.1 CDS Psed_0233 NC_015312.1 252112 252384 D KEGG: amd:AMED_9197 transglycosylase associated protein; transglycosylase associated protein 252112..252384 Pseudonocardia dioxanivorans CB1190 10362038 YP_004330362.1 CDS Psed_0234 NC_015312.1 252469 253521 R PFAM: Aminotransferase, class I/classII; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: svi:Svir_01830 aminotransferase; histidinol-phosphate aminotransferase complement(252469..253521) Pseudonocardia dioxanivorans CB1190 10362039 YP_004330363.1 CDS Psed_0235 NC_015312.1 253578 254282 D PFAM: Dienelactone hydrolase; KEGG: sen:SACE_0218 carboxymethylenebutenolidase; dienelactone hydrolase 253578..254282 Pseudonocardia dioxanivorans CB1190 10362040 YP_004330364.1 CDS Psed_0236 NC_015312.1 254324 256303 D TIGRFAM: Acetoacetyl-CoA synthase; KEGG: msp:Mspyr1_32060 acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; acetoacetyl-CoA synthase 254324..256303 Pseudonocardia dioxanivorans CB1190 10362041 YP_004330365.1 CDS Psed_0237 NC_015312.1 256746 257654 R KEGG: fre:Franean1_6636 NmrA family protein; NmrA family protein complement(256746..257654) Pseudonocardia dioxanivorans CB1190 10362044 YP_004330366.1 CDS Psed_0238 NC_015312.1 257751 258302 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_0878 transcriptional regulator; TetR family transcriptional regulator 257751..258302 Pseudonocardia dioxanivorans CB1190 10362045 YP_004330367.1 CDS Psed_0239 NC_015312.1 258323 259624 R PFAM: Cation/H+ exchanger; KEGG: rha:RHA1_ro03768 CPA1 family Na(+)/H(+) antiporter; sodium/hydrogen exchanger complement(258323..259624) Pseudonocardia dioxanivorans CB1190 10362046 YP_004330368.1 CDS Psed_0240 NC_015312.1 259805 260275 R KEGG: cai:Caci_5138 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit complement(259805..260275) Pseudonocardia dioxanivorans CB1190 10362047 YP_004330369.1 CDS Psed_0241 NC_015312.1 260620 260985 R KEGG: fal:FRAAL0869 hypothetical protein; hypothetical protein complement(260620..260985) Pseudonocardia dioxanivorans CB1190 10362048 YP_004330370.1 CDS Psed_0242 NC_015312.1 260982 261365 R KEGG: nca:Noca_4890 hypothetical protein; hypothetical protein complement(260982..261365) Pseudonocardia dioxanivorans CB1190 10362049 YP_004330371.1 CDS Psed_0243 NC_015312.1 261463 263037 R KEGG: cwo:Cwoe_3826 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Metal-dependent phosphohydrolase, HD subdomain; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(261463..263037) Pseudonocardia dioxanivorans CB1190 10362050 YP_004330372.1 CDS Psed_0244 NC_015312.1 263202 264107 D PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mil:ML5_2012 extradiol ring-cleavage dioxygenase class III protein subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 263202..264107 Pseudonocardia dioxanivorans CB1190 10362051 YP_004330373.1 CDS Psed_0245 NC_015312.1 264184 264678 R KEGG: gob:Gobs_0027 hypothetical protein; hypothetical protein complement(264184..264678) Pseudonocardia dioxanivorans CB1190 10362052 YP_004330374.1 CDS Psed_0246 NC_015312.1 264813 265898 R PFAM: ABC transporter permease; KEGG: rer:RER_31070 iron-siderophore ABC transporter permease; ABC transporter permease complement(264813..265898) Pseudonocardia dioxanivorans CB1190 10362053 YP_004330375.1 CDS Psed_0247 NC_015312.1 265895 266932 R PFAM: ABC transporter permease; KEGG: sro:Sros_7986 ABC transporter, permease, Fe3+-siderophore transport system; ABC transporter permease complement(265895..266932) Pseudonocardia dioxanivorans CB1190 10362054 YP_004330376.1 CDS Psed_0248 NC_015312.1 267075 268106 R PFAM: Periplasmic binding protein; KEGG: msm:MSMEG_0020 periplasmic binding protein; ABC transporter substrate-binding protein complement(267075..268106) Pseudonocardia dioxanivorans CB1190 10362055 YP_004330377.1 CDS Psed_0249 NC_015312.1 268320 269645 D KEGG: msm:MSMEG_0022 L-ornithine 5-monooxygenase; L-lysine 6-monooxygenase 268320..269645 Pseudonocardia dioxanivorans CB1190 10362056 YP_004330378.1 CDS Psed_0250 NC_015312.1 269646 271364 D KEGG: req:REQ_07550 abc transporter integral membrane subunit; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; xenobiotic-transporting ATPase 269646..271364 Pseudonocardia dioxanivorans CB1190 10362057 YP_004330379.1 CDS Psed_0251 NC_015312.1 271364 273199 D PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: req:REQ_07560 abc transporter integral membrane subunit; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 271364..273199 Pseudonocardia dioxanivorans CB1190 10362058 YP_004330380.1 CDS Psed_0252 NC_015312.1 273268 297006 D SMART: Polyketide synthase, phosphopantetheine-binding; Polyketide synthase, thioesterase domain; TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; KEGG: msm:MSMEG_0019 amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain; Thioesterase; amino acid adenylation protein 273268..297006 Pseudonocardia dioxanivorans CB1190 10362059 YP_004330381.1 CDS Psed_0253 NC_015312.1 297178 298605 D KEGG: kfl:Kfla_1528 monooxygenase FAD-binding protein; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 297178..298605 Pseudonocardia dioxanivorans CB1190 10362060 YP_004330382.1 CDS Psed_0254 NC_015312.1 298668 299153 R KEGG: rha:RHA1_ro03513 hypothetical protein; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase complement(298668..299153) Pseudonocardia dioxanivorans CB1190 10362061 YP_004330383.1 CDS Psed_0255 NC_015312.1 299254 300192 D manually curated; TIGRFAM: RNA polymerase sigma-70, ECF type; RNA polymerase sigma-70; KEGG: rha:RHA1_ro03512 sigma factor, sigma 70 type, group 4; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 299254..300192 Pseudonocardia dioxanivorans CB1190 10362062 YP_004330384.1 CDS Psed_0256 NC_015312.1 300217 301038 R KEGG: mkm:Mkms_5393 MOSC domain-containing protein; manually curated; PFAM: Molybdenum cofactor sulfurase, C-terminal; MOSC, N-terminal beta barrel; MOSC domain-containing protein complement(300217..301038) Pseudonocardia dioxanivorans CB1190 10362063 YP_004330385.1 CDS Psed_0257 NC_015312.1 301173 302291 D KEGG: sro:Sros_5246 hypothetical protein; hypothetical protein 301173..302291 Pseudonocardia dioxanivorans CB1190 10362064 YP_004330386.1 CDS Psed_0258 NC_015312.1 302362 303984 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: vei:Veis_0939 extracellular solute-binding protein; ABC transporter substrate-binding protein complement(302362..303984) Pseudonocardia dioxanivorans CB1190 10362065 YP_004330387.1 CDS Psed_0259 NC_015312.1 304527 305588 D KEGG: saq:Sare_2028 O-methyltransferase protein; PFAM: O-methyltransferase, family 2; O-demethylpuromycin O-methyltransferase 304527..305588 Pseudonocardia dioxanivorans CB1190 10362066 YP_004330388.1 CDS Psed_0260 NC_015312.1 305624 306778 R KEGG: bbr:BB1086 thiolase; PFAM: Thiolase, N-terminal; propanoyl-CoA C-acyltransferase complement(305624..306778) Pseudonocardia dioxanivorans CB1190 10362067 YP_004330389.1 CDS Psed_0261 NC_015312.1 306808 307380 R PFAM: Carboxymuconolactone decarboxylase; KEGG: sma:SAV_429 hypothetical protein; carboxymuconolactone decarboxylase complement(306808..307380) Pseudonocardia dioxanivorans CB1190 10362068 YP_004330390.1 CDS Psed_0262 NC_015312.1 307380 308594 R KEGG: reu:Reut_A1827 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase complement(307380..308594) Pseudonocardia dioxanivorans CB1190 10362069 YP_004330391.1 CDS Psed_0263 NC_015312.1 308711 309454 D KEGG: rop:ROP_51360 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 308711..309454 Pseudonocardia dioxanivorans CB1190 10362070 YP_004330392.1 CDS Psed_0264 NC_015312.1 309451 310251 R PFAM: Xylose isomerase, TIM barrel domain; KEGG: nml:Namu_0793 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein complement(309451..310251) Pseudonocardia dioxanivorans CB1190 10362071 YP_004330393.1 CDS Psed_0265 NC_015312.1 310253 311320 R KEGG: bcg:BCG9842_B2827 surface layer protein; surface layer protein complement(310253..311320) Pseudonocardia dioxanivorans CB1190 10362072 YP_004330394.1 CDS Psed_0266 NC_015312.1 311317 311607 R PFAM: YCII-related; KEGG: bph:Bphy_0288 YCII-related; hypothetical protein complement(311317..311607) Pseudonocardia dioxanivorans CB1190 10362073 YP_004330395.1 CDS Psed_0267 NC_015312.1 311798 313159 D TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: avn:Avin_31500 flavin-dependent oxidoreductase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 311798..313159 Pseudonocardia dioxanivorans CB1190 10362074 YP_004330396.1 CDS Psed_0268 NC_015312.1 313391 315727 D KEGG: sen:SACE_2975 isoquinoline 1-oxidoreductase, beta subunit; Isoquinoline 1-oxidoreductase 313391..315727 Pseudonocardia dioxanivorans CB1190 10362075 YP_004330397.1 CDS Psed_0269 NC_015312.1 315744 316214 D KEGG: sen:SACE_2974 isoquinoline 1-oxidoreductase, alpha subunit; PFAM: [2Fe-2S]-binding; Ferredoxin; Isoquinoline 1-oxidoreductase 315744..316214 Pseudonocardia dioxanivorans CB1190 10362076 YP_004330398.1 CDS Psed_0270 NC_015312.1 316223 316492 D hypothetical protein 316223..316492 Pseudonocardia dioxanivorans CB1190 10362077 YP_004330399.1 CDS Psed_0271 NC_015312.1 316583 316837 R hypothetical protein complement(316583..316837) Pseudonocardia dioxanivorans CB1190 10362078 YP_004330400.1 CDS Psed_0272 NC_015312.1 317357 318127 D KEGG: gbr:Gbro_2781 hypothetical protein; hypothetical protein 317357..318127 Pseudonocardia dioxanivorans CB1190 10362079 YP_004330401.1 CDS Psed_0273 NC_015312.1 318196 318810 D KEGG: sma:SAV_7098 hypothetical protein; hypothetical protein 318196..318810 Pseudonocardia dioxanivorans CB1190 10362080 YP_004330402.1 CDS Psed_0274 NC_015312.1 318880 319380 D KEGG: fri:FraEuI1c_2884 aromatic-ring-hydroxylating dioxygenase beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 318880..319380 Pseudonocardia dioxanivorans CB1190 10362081 YP_004330403.1 CDS Psed_0275 NC_015312.1 319377 320462 R PFAM: Lactonase, 7-bladed beta propeller; KEGG: lxx:Lxx00940 secreted protein; Lactonase, 7-bladed beta propeller complement(319377..320462) Pseudonocardia dioxanivorans CB1190 10362082 YP_004330404.1 CDS Psed_0276 NC_015312.1 320550 321977 D PFAM: Major facilitator superfamily MFS-1; KEGG: bay:RBAM_029980 YusP; major facilitator superfamily protein 320550..321977 Pseudonocardia dioxanivorans CB1190 10362083 YP_004330405.1 CDS Psed_0277 NC_015312.1 322079 323740 D KEGG: rop:ROP_49840 monooxygenase; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 322079..323740 Pseudonocardia dioxanivorans CB1190 10362084 YP_004330406.1 CDS Psed_0278 NC_015312.1 323850 324335 D PFAM: Redoxin; KEGG: mmr:Mmar10_2222 redoxin domain-containing protein; redoxin domain-containing protein 323850..324335 Pseudonocardia dioxanivorans CB1190 10362085 YP_004330407.1 CDS Psed_0280 NC_015312.1 325245 326636 D KEGG: nml:Namu_5171 alanine--tRNA ligase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; alanyl-tRNA synthetase 325245..326636 Pseudonocardia dioxanivorans CB1190 10362087 YP_004330408.1 CDS Psed_0281 NC_015312.1 326829 328970 R KEGG: rer:RER_32310 hypothetical protein; hypothetical protein complement(326829..328970) Pseudonocardia dioxanivorans CB1190 10362088 YP_004330409.1 CDS Psed_0282 NC_015312.1 328984 330267 R PFAM: esterase; KEGG: art:Arth_4531 esterase; esterase complement(328984..330267) Pseudonocardia dioxanivorans CB1190 10362089 YP_004330410.1 CDS Psed_0283 NC_015312.1 330422 330841 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amd:AMED_3391 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 330422..330841 Pseudonocardia dioxanivorans CB1190 10362090 YP_004330411.1 CDS Psed_0284 NC_015312.1 330846 331235 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mva:Mvan_0766 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein complement(330846..331235) Pseudonocardia dioxanivorans CB1190 10362091 YP_004330412.1 CDS Psed_0285 NC_015312.1 331702 332535 D SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: amd:AMED_0484 AraC family transcriptional regulator; AraC family transcriptional regulator 331702..332535 Pseudonocardia dioxanivorans CB1190 10362092 YP_004330413.1 CDS Psed_0286 NC_015312.1 332487 333485 D KEGG: kfl:Kfla_3032 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SMART: Polyketide synthase/Fatty acid synthase, KR; NAD-dependent epimerase/dehydratase 332487..333485 Pseudonocardia dioxanivorans CB1190 10362093 YP_004330414.1 CDS Psed_0287 NC_015312.1 333497 334093 D KEGG: mau:Micau_2727 hypothetical protein; hypothetical protein 333497..334093 Pseudonocardia dioxanivorans CB1190 10362094 YP_004330415.1 CDS Psed_0288 NC_015312.1 334377 335423 D PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: rdn:HMPREF0733_10992 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; S-(hydroxymethyl)glutathione dehydrogenase 334377..335423 Pseudonocardia dioxanivorans CB1190 10362095 YP_004330416.1 CDS Psed_0289 NC_015312.1 335560 336210 D KEGG: fra:Francci3_1236 hypothetical protein; hypothetical protein 335560..336210 Pseudonocardia dioxanivorans CB1190 10362096 YP_004330417.1 CDS Psed_0290 NC_015312.1 336227 336964 R KEGG: tfu:Tfu_1507 methylated-DNA-(protein)-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Ada DNA repair, metal-binding; methylated-DNA--protein-cysteine methyltransferase complement(336227..336964) Pseudonocardia dioxanivorans CB1190 10362097 YP_004330418.1 CDS Psed_0291 NC_015312.1 336961 337572 R KEGG: sen:SACE_3367 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(336961..337572) Pseudonocardia dioxanivorans CB1190 10362098 YP_004330419.1 CDS Psed_0292 NC_015312.1 337611 338459 R PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro08833 epoxide hydrolase; alpha/beta hydrolase complement(337611..338459) Pseudonocardia dioxanivorans CB1190 10362099 YP_004330420.1 CDS Psed_0293 NC_015312.1 338469 339857 R KEGG: nda:Ndas_2704 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(338469..339857) Pseudonocardia dioxanivorans CB1190 10362100 YP_004330421.1 CDS Psed_0295 NC_015312.1 340259 341035 R PFAM: Crotonase, core; KEGG: amd:AMED_5287 enoyl-CoA hydratase; enoyl-CoA hydratase complement(340259..341035) Pseudonocardia dioxanivorans CB1190 10362102 YP_004330422.1 CDS Psed_0296 NC_015312.1 341035 342267 R KEGG: lsp:Bsph_0910 hypothetical protein; PFAM: CoA-transferase III; formyl-CoA transferase complement(341035..342267) Pseudonocardia dioxanivorans CB1190 10362103 YP_004330423.1 CDS Psed_0297 NC_015312.1 342479 342625 D hypothetical protein 342479..342625 Pseudonocardia dioxanivorans CB1190 10362104 YP_004330424.1 CDS Psed_0298 NC_015312.1 342636 343319 R PFAM: Protein of unknown function DUF2086; KEGG: cak:Caul_4049 hypothetical protein; hypothetical protein complement(342636..343319) Pseudonocardia dioxanivorans CB1190 10362105 YP_004330425.1 CDS Psed_0299 NC_015312.1 343414 343812 R KEGG: msm:MSMEG_3380 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein complement(343414..343812) Pseudonocardia dioxanivorans CB1190 10362106 YP_004330426.1 CDS Psed_0300 NC_015312.1 343809 344819 R KEGG: dge:Dgeo_2171 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; pyridoxine 4-dehydrogenase complement(343809..344819) Pseudonocardia dioxanivorans CB1190 10362107 YP_004330427.1 CDS Psed_0301 NC_015312.1 344917 346092 D KEGG: rha:RHA1_ro08443 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; alcohol dehydrogenase 344917..346092 Pseudonocardia dioxanivorans CB1190 10362108 YP_004330428.1 CDS Psed_0302 NC_015312.1 346064 346741 R KEGG: nar:Saro_0570 epoxide hydrolase domain-containing phosphatase; TIGRFAM: HAD-superfamily phosphatase, subfamily IA/Epoxide hydrolase, N-terminal; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(346064..346741) Pseudonocardia dioxanivorans CB1190 10362109 YP_004330429.1 CDS Psed_0303 NC_015312.1 346738 347715 R KEGG: mau:Micau_5172 DNA polymerase LigD polymerase subunit; TIGRFAM: DNA polymerase LigD, polymerase domain; PFAM: DNA primase, small subunit; DNA polymerase LigD, polymerase domain-containing protein complement(346738..347715) Pseudonocardia dioxanivorans CB1190 10362110 YP_004330430.1 CDS Psed_0304 NC_015312.1 347900 349144 D PFAM: Transposase, mutator type; KEGG: gob:Gobs_2905 transposase mutator type; transposase mutator type 347900..349144 Pseudonocardia dioxanivorans CB1190 10362111 YP_004330431.1 CDS Psed_0305 NC_015312.1 349343 351331 R KEGG: esc:Entcl_2744 cell wall surface anchor family protein; cell wall surface anchor family protein complement(349343..351331) Pseudonocardia dioxanivorans CB1190 10362112 YP_004330432.1 CDS Psed_0306 NC_015312.1 351556 352944 D KEGG: sen:SACE_4673 hypothetical protein; PFAM: Aminotransferase class-III; acetylornithine transaminase 351556..352944 Pseudonocardia dioxanivorans CB1190 10362113 YP_004330433.1 CDS Psed_0307 NC_015312.1 352941 354101 D KEGG: sen:SACE_3049 aminotransferase; PFAM: Aminotransferase, class I/classII; cystathionine beta-lyase 352941..354101 Pseudonocardia dioxanivorans CB1190 10362114 YP_004330434.1 CDS Psed_0308 NC_015312.1 354145 356085 D PFAM: ABC-1; KEGG: nml:Namu_4857 ABC-1 domain-containing protein; ABC transporter 354145..356085 Pseudonocardia dioxanivorans CB1190 10362115 YP_004330435.1 CDS Psed_0309 NC_015312.1 356218 358224 R PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: mil:ML5_1065 abc transporter transmembrane region; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase complement(356218..358224) Pseudonocardia dioxanivorans CB1190 10362116 YP_004330436.1 CDS Psed_0310 NC_015312.1 358221 359954 R PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: mil:ML5_1066 abc transporter related protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase complement(358221..359954) Pseudonocardia dioxanivorans CB1190 10362117 YP_004330437.1 CDS Psed_0311 NC_015312.1 359959 360609 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: kfl:Kfla_3613 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(359959..360609) Pseudonocardia dioxanivorans CB1190 10362118 YP_004330438.1 CDS Psed_0312 NC_015312.1 360708 361127 R PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS complement(360708..361127) Pseudonocardia dioxanivorans CB1190 10362119 YP_004330439.1 CDS Psed_0313 NC_015312.1 361433 361840 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_0703 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(361433..361840) Pseudonocardia dioxanivorans CB1190 10362120 YP_004330440.1 CDS Psed_0314 NC_015312.1 361972 362691 R TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: kfl:Kfla_0717 hypothetical protein; hypothetical protein complement(361972..362691) Pseudonocardia dioxanivorans CB1190 10362121 YP_004330441.1 CDS Psed_0315 NC_015312.1 362880 363668 D KEGG: amd:AMED_4171 hypothetical protein; hypothetical protein 362880..363668 Pseudonocardia dioxanivorans CB1190 10362122 YP_004330442.1 CDS Psed_0316 NC_015312.1 363692 364399 R KEGG: amd:AMED_2410 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(363692..364399) Pseudonocardia dioxanivorans CB1190 10362123 YP_004330443.1 CDS Psed_0317 NC_015312.1 364351 365472 R PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: amd:AMED_2411 two-component system histidine kinase; histidine kinase complement(364351..365472) Pseudonocardia dioxanivorans CB1190 10362124 YP_004330444.1 CDS Psed_0318 NC_015312.1 365469 365984 R KEGG: amd:AMED_8940 hypothetical protein; hypothetical protein complement(365469..365984) Pseudonocardia dioxanivorans CB1190 10362125 YP_004330445.1 CDS Psed_0319 NC_015312.1 366171 366410 D hypothetical protein 366171..366410 Pseudonocardia dioxanivorans CB1190 10362126 YP_004330446.1 CDS Psed_0320 NC_015312.1 366420 367034 R KEGG: sgr:SGR_303 hypothetical protein; hypothetical protein complement(366420..367034) Pseudonocardia dioxanivorans CB1190 10362127 YP_004330447.1 CDS Psed_0321 NC_015312.1 367031 367786 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: bcv:Bcav_3884 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(367031..367786) Pseudonocardia dioxanivorans CB1190 10362128 YP_004330448.1 CDS Psed_0322 NC_015312.1 367875 368834 D PFAM: ABC transporter-like; KEGG: aau:AAur_3041 ABC-type multidrug transport system, ATPase component; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 367875..368834 Pseudonocardia dioxanivorans CB1190 10362129 YP_004330449.1 CDS Psed_0323 NC_015312.1 368834 369631 D PFAM: ABC-2 type transporter; KEGG: aau:AAur_3042 ABC-type multidrug transport system, permease component; ABC transporter 368834..369631 Pseudonocardia dioxanivorans CB1190 10362130 YP_004330450.1 CDS Psed_0324 NC_015312.1 369686 370450 R PFAM: Nucleoside phosphorylase domain; KEGG: fal:FRAAL4002 purine-nucleoside phosphorylase; purine or other phosphorylase 1 complement(369686..370450) Pseudonocardia dioxanivorans CB1190 10362131 YP_004330451.1 CDS Psed_0325 NC_015312.1 370453 371073 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ami:Amir_1766 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 370453..371073 Pseudonocardia dioxanivorans CB1190 10362132 YP_004330452.1 CDS Psed_0326 NC_015312.1 371346 372380 D KEGG: tcu:Tcur_1808 cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 371346..372380 Pseudonocardia dioxanivorans CB1190 10362133 YP_004330453.1 CDS Psed_0327 NC_015312.1 372417 373409 R TIGRFAM: Ku, prokaryotic type; PFAM: DNA helicase, ATP-dependent, Ku type; KEGG: cfl:Cfla_1902 Ku protein; SMART: DNA helicase, ATP-dependent, Ku type; Ku protein complement(372417..373409) Pseudonocardia dioxanivorans CB1190 10362134 YP_004330454.1 CDS Psed_0328 NC_015312.1 373507 374439 D KEGG: cfl:Cfla_1903 DNA polymerase LigD, ligase domain protein; manually curated; PFAM: DNA ligase, ATP-dependent, central; ATP dependent DNA ligase 373507..374439 Pseudonocardia dioxanivorans CB1190 10362135 YP_004330455.1 CDS Psed_0329 NC_015312.1 374516 374704 D KEGG: amd:AMED_0309 hypothetical protein; hypothetical protein 374516..374704 Pseudonocardia dioxanivorans CB1190 10362136 YP_004330456.1 CDS Psed_0330 NC_015312.1 374867 375460 D PFAM: Protein of unknown function DUF1089; KEGG: ami:Amir_0163 protein of unknown function DUF1089; hypothetical protein 374867..375460 Pseudonocardia dioxanivorans CB1190 10362137 YP_004330457.1 CDS Psed_0331 NC_015312.1 375486 376433 R PFAM: Prephenate dehydrogenase; KEGG: ami:Amir_0168 prephenate dehydrogenase; prephenate dehydrogenase complement(375486..376433) Pseudonocardia dioxanivorans CB1190 10362138 YP_004330458.1 CDS Psed_0332 NC_015312.1 376478 377806 R PFAM: Amidase; KEGG: nml:Namu_0017 amidase; amidase complement(376478..377806) Pseudonocardia dioxanivorans CB1190 10362139 YP_004330459.1 CDS Psed_0333 NC_015312.1 377853 379073 R TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: ami:Amir_0169 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase complement(377853..379073) Pseudonocardia dioxanivorans CB1190 10362140 YP_004330460.1 CDS Psed_0334 NC_015312.1 379178 379690 D KEGG: svi:Svir_36890 hypothetical protein; hypothetical protein 379178..379690 Pseudonocardia dioxanivorans CB1190 10362141 YP_004330461.1 CDS Psed_0335 NC_015312.1 379714 380175 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sen:SACE_0233 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase zinc-binding protein 379714..380175 Pseudonocardia dioxanivorans CB1190 10362142 YP_004330462.1 CDS Psed_0336 NC_015312.1 380228 380680 D PFAM: NUDIX hydrolase domain; KEGG: fre:Franean1_5579 NUDIX hydrolase; NUDIX hydrolase 380228..380680 Pseudonocardia dioxanivorans CB1190 10362143 YP_004330463.1 CDS Psed_0337 NC_015312.1 380849 381163 R PFAM: Small multidrug resistance protein; KEGG: tbi:Tbis_0442 small multidrug resistance protein; small multidrug resistance protein complement(380849..381163) Pseudonocardia dioxanivorans CB1190 10362145 YP_004330464.1 CDS Psed_0338 NC_015312.1 381334 382065 D KEGG: sgr:SGR_4166 hypothetical protein; hypothetical protein 381334..382065 Pseudonocardia dioxanivorans CB1190 10362146 YP_004330465.1 CDS Psed_0339 NC_015312.1 382253 383623 D KEGG: sen:SACE_0625 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; Bcr/CflA subfamily drug resistance transporter 382253..383623 Pseudonocardia dioxanivorans CB1190 10362147 YP_004330466.1 CDS Psed_0340 NC_015312.1 383736 384320 D hypothetical protein 383736..384320 Pseudonocardia dioxanivorans CB1190 10362148 YP_004330467.1 CDS Psed_0341 NC_015312.1 384373 385458 D PFAM: Methyltransferase type 12; KEGG: rxy:Rxyl_3149 glycosyl transferase protein; type 12 methyltransferase 384373..385458 Pseudonocardia dioxanivorans CB1190 10362149 YP_004330468.1 CDS Psed_0342 NC_015312.1 385497 385856 D KEGG: fal:FRAAL0866 hypothetical protein; hypothetical protein 385497..385856 Pseudonocardia dioxanivorans CB1190 10362150 YP_004330469.1 CDS Psed_0343 NC_015312.1 385916 387205 R PFAM: Amidohydrolase 1; KEGG: rha:RHA1_ro04297 dipeptidase; amidohydrolase complement(385916..387205) Pseudonocardia dioxanivorans CB1190 10362151 YP_004330470.1 CDS Psed_0344 NC_015312.1 387238 387999 R PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro04298 hydrolase; alpha/beta hydrolase complement(387238..387999) Pseudonocardia dioxanivorans CB1190 10362152 YP_004330471.1 CDS Psed_0345 NC_015312.1 388030 388920 R KEGG: bpt:Bpet4196 fumarylacetoacetate hydrolase protein; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase complement(388030..388920) Pseudonocardia dioxanivorans CB1190 10362153 YP_004330472.1 CDS Psed_0346 NC_015312.1 389077 389739 D KEGG: axy:AXYL_04513 GntR family regulatory protein 50; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 389077..389739 Pseudonocardia dioxanivorans CB1190 10362154 YP_004330473.1 CDS Psed_0347 NC_015312.1 389743 390465 R KEGG: mau:Micau_2738 hypothetical protein; hypothetical protein complement(389743..390465) Pseudonocardia dioxanivorans CB1190 10362155 YP_004330474.1 CDS Psed_0348 NC_015312.1 390996 393485 D SMART: ATPase, AAA+ type, core; manually curated; KEGG: sen:SACE_0251 DNA polymerase III gamma subunit; TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; DNA polymerase III subunits gamma and tau 390996..393485 Pseudonocardia dioxanivorans CB1190 10362158 YP_004330475.1 CDS Psed_0349 NC_015312.1 393574 395952 D TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: rer:RER_45380 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; ATPase 393574..395952 Pseudonocardia dioxanivorans CB1190 10362159 YP_004330476.1 CDS Psed_0350 NC_015312.1 395977 396999 R PFAM: Bile acid:sodium symporter; KEGG: amd:AMED_6378 predicted Na+-dependent transporter; bile acid:sodium symporter complement(395977..396999) Pseudonocardia dioxanivorans CB1190 10362160 YP_004330477.1 CDS Psed_0351 NC_015312.1 397058 397921 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: scb:SCAB_16931 LysR family transcriptional regulator; LysR family transcriptional regulator 397058..397921 Pseudonocardia dioxanivorans CB1190 10362161 YP_004330478.1 CDS Psed_0352 NC_015312.1 397942 398772 R KEGG: amd:AMED_8913 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; cell wall hydrolase/autolysin complement(397942..398772) Pseudonocardia dioxanivorans CB1190 10362162 YP_004330479.1 CDS Psed_0353 NC_015312.1 398854 399195 D TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: rop:ROP_41370 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein 398854..399195 Pseudonocardia dioxanivorans CB1190 10362163 YP_004330480.1 CDS Psed_0354 NC_015312.1 399200 399817 D SMART: Toprim domain; TIGRFAM: RecR protein; KEGG: svi:Svir_36550 recombination protein RecR; HAMAP: RecR protein; PFAM: Toprim domain; Zinc finger C4-type, RecR; Recombination protein recR 399200..399817 Pseudonocardia dioxanivorans CB1190 10362164 YP_004330481.1 CDS Psed_0355 NC_015312.1 399846 400079 R hypothetical protein complement(399846..400079) Pseudonocardia dioxanivorans CB1190 10362165 YP_004330482.1 CDS Psed_0356 NC_015312.1 400231 400413 R hypothetical protein complement(400231..400413) Pseudonocardia dioxanivorans CB1190 10362166 YP_004330483.1 CDS Psed_0357 NC_015312.1 400846 401742 D KEGG: mil:ML5_0071 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 400846..401742 Pseudonocardia dioxanivorans CB1190 10362167 YP_004330484.1 CDS Psed_0358 NC_015312.1 401739 401924 D PFAM: Domain of unknown function DUF397; KEGG: svi:Svir_12060 protein of unknown function (DUF397); hypothetical protein 401739..401924 Pseudonocardia dioxanivorans CB1190 10362168 YP_004330485.1 CDS Psed_0359 NC_015312.1 402097 403893 R KEGG: ami:Amir_0213 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; TIGRFAM: Yeast 2-isopropylmalate synthase; HAMAP: 2-isopropylmalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase complement(402097..403893) Pseudonocardia dioxanivorans CB1190 10362169 YP_004330486.1 CDS Psed_0360 NC_015312.1 404193 404495 D KEGG: amd:AMED_8885 hypothetical protein; hypothetical protein 404193..404495 Pseudonocardia dioxanivorans CB1190 10362170 YP_004330487.1 CDS Psed_0361 NC_015312.1 404539 405756 R KEGG: ami:Amir_0216 hypothetical protein; hypothetical protein complement(404539..405756) Pseudonocardia dioxanivorans CB1190 10362171 YP_004330488.1 CDS Psed_0362 NC_015312.1 405994 407259 D KEGG: nml:Namu_0694 aspartate kinase; TIGRFAM: Aspartate kinase domain; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase 405994..407259 Pseudonocardia dioxanivorans CB1190 10362172 YP_004330489.1 CDS Psed_0363 NC_015312.1 407256 408329 D SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: sen:SACE_0283 aspartate-semialdehyde dehydrogenase, USG-1 related; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase 407256..408329 Pseudonocardia dioxanivorans CB1190 10362173 YP_004330490.1 CDS Psed_0364 NC_015312.1 408345 409517 R KEGG: ami:Amir_0216 hypothetical protein; hypothetical protein complement(408345..409517) Pseudonocardia dioxanivorans CB1190 10362174 YP_004330491.1 CDS Psed_0365 NC_015312.1 409604 410110 D KEGG: sen:SACE_0433 plant-type carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; carbonic anhydrase 409604..410110 Pseudonocardia dioxanivorans CB1190 10362175 YP_004330492.1 CDS Psed_0367 NC_015312.1 410427 410816 R PFAM: thiol-disulphide oxidoreductase DCC; KEGG: krh:KRH_04440 hypothetical protein; thiol-disulfide oxidoreductase complement(410427..410816) Pseudonocardia dioxanivorans CB1190 10362177 YP_004330493.1 CDS Psed_0368 NC_015312.1 410845 411204 D KEGG: tkm:TK90_0559 arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: Arsenate reductase-like; arsenate reductase 410845..411204 Pseudonocardia dioxanivorans CB1190 10362178 YP_004330494.1 CDS Psed_0369 NC_015312.1 411215 412285 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; Amino acid-binding ACT; KEGG: sma:SAV_7063 hypothetical protein; GCN5-like N-acetyltransferase complement(411215..412285) Pseudonocardia dioxanivorans CB1190 10362179 YP_004330495.1 CDS Psed_0370 NC_015312.1 412377 412631 R hypothetical protein complement(412377..412631) Pseudonocardia dioxanivorans CB1190 10362180 YP_004330496.1 CDS Psed_0371 NC_015312.1 412669 414513 R KEGG: sen:SACE_0309 peptide hydrolase; acylaminoacyl peptidase complement(412669..414513) Pseudonocardia dioxanivorans CB1190 10362181 YP_004330497.1 CDS Psed_0372 NC_015312.1 414581 415084 D PFAM: Protein of unknown function DUF1707; KEGG: gob:Gobs_0130 hypothetical protein; hypothetical protein 414581..415084 Pseudonocardia dioxanivorans CB1190 10362182 YP_004330498.1 CDS Psed_0373 NC_015312.1 415112 415771 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mil:ML5_3711 regulatory protein TetR; TetR family transcriptional regulator complement(415112..415771) Pseudonocardia dioxanivorans CB1190 10362183 YP_004330499.1 CDS Psed_0374 NC_015312.1 415829 416317 D PFAM: Cupin 2, conserved barrel; KEGG: mil:ML5_3712 cupin 2 conserved barrel domain protein; cupin 415829..416317 Pseudonocardia dioxanivorans CB1190 10362184 YP_004330500.1 CDS Psed_0375 NC_015312.1 416352 416939 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_1492 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(416352..416939) Pseudonocardia dioxanivorans CB1190 10362185 YP_004330501.1 CDS Psed_0376 NC_015312.1 417045 418286 R KEGG: mau:Micau_0584 sigma-70 family RNA polymerase; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(417045..418286) Pseudonocardia dioxanivorans CB1190 10362186 YP_004330502.1 CDS Psed_0377 NC_015312.1 418283 418648 R PFAM: YCII-related; KEGG: mil:ML5_0780 YCII-related protein; hypothetical protein complement(418283..418648) Pseudonocardia dioxanivorans CB1190 10362187 YP_004330503.1 CDS Psed_0378 NC_015312.1 418826 419461 D PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: reu:Reut_A0240 bifunctional deaminase-reductase, C-terminal; bifunctional deaminase-reductase domain-containing protein 418826..419461 Pseudonocardia dioxanivorans CB1190 10362188 YP_004330504.1 CDS Psed_0379 NC_015312.1 419600 419851 D hypothetical protein 419600..419851 Pseudonocardia dioxanivorans CB1190 10362189 YP_004330505.1 CDS Psed_0380 NC_015312.1 419866 420819 R PFAM: ATP-grasp fold, RimK-type; KEGG: hau:Haur_5021 RimK domain-containing protein ATP-grasp; RimK domain-containing protein ATP-grasp complement(419866..420819) Pseudonocardia dioxanivorans CB1190 10362190 YP_004330506.1 CDS Psed_0381 NC_015312.1 420816 421010 R hypothetical protein complement(420816..421010) Pseudonocardia dioxanivorans CB1190 10362191 YP_004330507.1 CDS Psed_0382 NC_015312.1 421053 421274 R hypothetical protein complement(421053..421274) Pseudonocardia dioxanivorans CB1190 10362192 YP_004330508.1 CDS Psed_0383 NC_015312.1 421579 422319 D hypothetical protein 421579..422319 Pseudonocardia dioxanivorans CB1190 10362193 YP_004330509.1 CDS Psed_0384 NC_015312.1 422349 423062 D manually curated; TIGRFAM: Protein of unknown function DUF124; KEGG: azc:AZC_0415 hypothetical protein; PFAM: Protein of unknown function DUF124; hypothetical protein 422349..423062 Pseudonocardia dioxanivorans CB1190 10362194 YP_004330510.1 CDS Psed_0385 NC_015312.1 423020 424615 R KEGG: gsu:GSU0248 BchE/P-methylase protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein complement(423020..424615) Pseudonocardia dioxanivorans CB1190 10362195 YP_004330511.1 CDS Psed_0386 NC_015312.1 424749 425387 R PFAM: ThiJ/PfpI; KEGG: mmi:MMAR_0071 transcriptional regulatory protein; ThiJ/PfpI domain-containing protein complement(424749..425387) Pseudonocardia dioxanivorans CB1190 10362196 YP_004330512.1 CDS Psed_0387 NC_015312.1 425401 426375 R KEGG: mjl:Mjls_0741 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(425401..426375) Pseudonocardia dioxanivorans CB1190 10362197 YP_004330513.1 CDS Psed_0388 NC_015312.1 426517 427914 D KEGG: fal:FRAAL0556 carboxylesterase; PFAM: Carboxylesterase, type B; acetylcholinesterase 426517..427914 Pseudonocardia dioxanivorans CB1190 10362198 YP_004330514.1 CDS Psed_0389 NC_015312.1 428058 428681 D KEGG: htu:Htur_4265 hypothetical protein; hypothetical protein 428058..428681 Pseudonocardia dioxanivorans CB1190 10362199 YP_004330515.1 CDS Psed_0390 NC_015312.1 428678 429085 D KEGG: sti:Sthe_2946 hypothetical protein; hypothetical protein 428678..429085 Pseudonocardia dioxanivorans CB1190 10362200 YP_004330516.1 CDS Psed_0391 NC_015312.1 429280 430218 R PFAM: Metallo-dependent phosphatase; KEGG: ami:Amir_0233 metallophosphoesterase; metallophosphoesterase complement(429280..430218) Pseudonocardia dioxanivorans CB1190 10362202 YP_004330517.1 CDS Psed_0392 NC_015312.1 430222 430710 D KEGG: sen:SACE_0312 GatB/YqeY; hypothetical protein 430222..430710 Pseudonocardia dioxanivorans CB1190 10362203 YP_004330518.1 CDS Psed_0393 NC_015312.1 430735 433593 R SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: rha:RHA1_ro04353 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase I complement(430735..433593) Pseudonocardia dioxanivorans CB1190 10362204 YP_004330519.1 CDS Psed_0394 NC_015312.1 433817 434452 R KEGG: sen:SACE_0376 hypothetical protein; hypothetical protein complement(433817..434452) Pseudonocardia dioxanivorans CB1190 10362205 YP_004330520.1 CDS Psed_0395 NC_015312.1 434527 435120 R KEGG: ami:Amir_0285 hypothetical protein; hypothetical protein complement(434527..435120) Pseudonocardia dioxanivorans CB1190 10362206 YP_004330521.1 CDS Psed_0396 NC_015312.1 435233 435775 R KEGG: ami:Amir_0285 hypothetical protein; hypothetical protein complement(435233..435775) Pseudonocardia dioxanivorans CB1190 10362207 YP_004330522.1 CDS Psed_0397 NC_015312.1 436062 438389 R PFAM: Pyrophosphate-energised proton pump; TIGRFAM: Pyrophosphate-energised proton pump; HAMAP: Pyrophosphate-energised proton pump; KEGG: ami:Amir_0284 membrane-bound proton-translocating pyrophosphatase; pyrophosphate-energized proton pump complement(436062..438389) Pseudonocardia dioxanivorans CB1190 10362208 YP_004330523.1 CDS Psed_0398 NC_015312.1 438685 441036 D TIGRFAM: DEAD/DEAH-box helicase, PFAM: Protein of unknown function DUF1998; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: svi:Svir_35840 helicase protein with metal-binding cysteine cluster; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; helicase/secretion DEAH-box helicase 438685..441036 Pseudonocardia dioxanivorans CB1190 10362209 YP_004330524.1 CDS Psed_0399 NC_015312.1 441519 442505 R TIGRFAM: Helicase/secretion neighbourhood TadE-like protein; KEGG: mab:MAB_0475 hypothetical protein; helicase/secretion neighborhood TadE-like protein complement(441519..442505) Pseudonocardia dioxanivorans CB1190 10362210 YP_004330525.1 CDS Psed_0400 NC_015312.1 442538 442792 R KEGG: rha:RHA1_ro04343 hypothetical protein; hypothetical protein complement(442538..442792) Pseudonocardia dioxanivorans CB1190 10362211 YP_004330526.1 CDS Psed_0401 NC_015312.1 442848 443579 R PFAM: Type II secretion system F domain; KEGG: rop:ROP_42520 hypothetical membrane protein; type II secretion system F domain-containing protein complement(442848..443579) Pseudonocardia dioxanivorans CB1190 10362212 YP_004330527.1 CDS Psed_0402 NC_015312.1 443576 444385 R PFAM: Type II secretion system F domain; KEGG: ami:Amir_0277 type II secretion system protein; type II secretion system F domain-containing protein complement(443576..444385) Pseudonocardia dioxanivorans CB1190 10362213 YP_004330528.1 CDS Psed_0403 NC_015312.1 444379 445527 R KEGG: nfa:nfa3590 hypothetical protein; TIGRFAM: Helicase/secretion neighbourhood ATPase; PFAM: Type II secretion system protein E; helicase/secretion ATPase complement(444379..445527) Pseudonocardia dioxanivorans CB1190 10362214 YP_004330529.1 CDS Psed_0404 NC_015312.1 445524 446603 R TIGRFAM: Conserved hypothetical protein CHP03815, CpaE-like; KEGG: ami:Amir_0275 hypothetical protein; helicase/secretion CpaE-like protein complement(445524..446603) Pseudonocardia dioxanivorans CB1190 10362215 YP_004330530.1 CDS Psed_0405 NC_015312.1 447100 447912 D manually curated; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: sen:SACE_0365 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 447100..447912 Pseudonocardia dioxanivorans CB1190 10362216 YP_004330531.1 CDS Psed_0406 NC_015312.1 448397 449152 R KEGG: rha:RHA1_ro04337 hypothetical protein; hypothetical protein complement(448397..449152) Pseudonocardia dioxanivorans CB1190 10362217 YP_004330532.1 CDS Psed_0407 NC_015312.1 449345 451321 D PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate-CoA ligase; HAMAP: Acetate-CoA ligase; KEGG: ami:Amir_0262 acetyl-CoA synthetase; acetyl-coenzyme A synthetase 449345..451321 Pseudonocardia dioxanivorans CB1190 10362218 YP_004330533.1 CDS Psed_0410 NC_015312.1 452801 453544 D PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: fri:FraEuI1c_3893 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 452801..453544 Pseudonocardia dioxanivorans CB1190 10362221 YP_004330534.1 CDS Psed_0411 NC_015312.1 453553 454545 D PFAM: ATPase, AAA-3; KEGG: fri:FraEuI1c_3894 ATPase associated with various cellular activities AAA_3; ATPase 453553..454545 Pseudonocardia dioxanivorans CB1190 10362222 YP_004330535.1 CDS Psed_0412 NC_015312.1 454542 455432 D KEGG: pol:Bpro_3892 hypothetical protein; PFAM: Domain of unknown function DUF58; SMART: von Willebrand factor, type A; hypothetical protein 454542..455432 Pseudonocardia dioxanivorans CB1190 10362223 YP_004330536.1 CDS Psed_0413 NC_015312.1 455432 456430 D KEGG: azo:azo2860 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 455432..456430 Pseudonocardia dioxanivorans CB1190 10362224 YP_004330537.1 CDS Psed_0414 NC_015312.1 456432 457520 D KEGG: fri:FraEuI1c_3897 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 456432..457520 Pseudonocardia dioxanivorans CB1190 10362225 YP_004330538.1 CDS Psed_0415 NC_015312.1 457551 457979 D PFAM: Peptide chain release factor class I/class II; KEGG: amd:AMED_9033 peptide chain release factor class I; class I peptide chain release factor 457551..457979 Pseudonocardia dioxanivorans CB1190 10362226 YP_004330539.1 CDS Psed_0416 NC_015312.1 458065 459285 D TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: amd:AMED_8822 Na+:H+ antiporter, NhaA family; PFAM: Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter NhaA 458065..459285 Pseudonocardia dioxanivorans CB1190 10362227 YP_004330540.1 CDS Psed_0417 NC_015312.1 459529 460014 D KEGG: req:REQ_05220 integral membrane protein; hypothetical protein 459529..460014 Pseudonocardia dioxanivorans CB1190 10362228 YP_004330541.1 CDS Psed_0418 NC_015312.1 460018 461004 D KEGG: ami:Amir_0259 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; soluble epoxide hydrolase 460018..461004 Pseudonocardia dioxanivorans CB1190 10362229 YP_004330542.1 CDS Psed_0419 NC_015312.1 460940 461959 R PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: svi:Svir_38180 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(460940..461959) Pseudonocardia dioxanivorans CB1190 10362230 YP_004330543.1 CDS Psed_0420 NC_015312.1 462121 463374 D PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: amd:AMED_9086 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 462121..463374 Pseudonocardia dioxanivorans CB1190 10362231 YP_004330544.1 CDS Psed_0421 NC_015312.1 463479 464300 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nfa:nfa21520 transcriptional regulator; LysR family transcriptional regulator complement(463479..464300) Pseudonocardia dioxanivorans CB1190 10362232 YP_004330545.1 CDS Psed_0423 NC_015312.1 464800 465963 D KEGG: mva:Mvan_5290 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; aspartate transaminase 464800..465963 Pseudonocardia dioxanivorans CB1190 10362234 YP_004330546.1 CDS Psed_0424 NC_015312.1 466022 466789 D PFAM: Ion transport 2; KEGG: ach:Achl_2774 ion transport 2 domain protein; Ion transport 2 domain-containing protein 466022..466789 Pseudonocardia dioxanivorans CB1190 10362235 YP_004330547.1 CDS Psed_0425 NC_015312.1 466734 467897 R KEGG: ami:Amir_6894 aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; tjhreonine aldolase complement(466734..467897) Pseudonocardia dioxanivorans CB1190 10362236 YP_004330548.1 CDS Psed_0426 NC_015312.1 468081 468608 D KEGG: ami:Amir_6893 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-E type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 468081..468608 Pseudonocardia dioxanivorans CB1190 10362237 YP_004330549.1 CDS Psed_0427 NC_015312.1 468622 469281 D KEGG: sen:SACE_7160 hypothetical protein; hypothetical protein 468622..469281 Pseudonocardia dioxanivorans CB1190 10362238 YP_004330550.1 CDS Psed_0428 NC_015312.1 469345 470763 D TIGRFAM: Adenylosuccinate lyase; KEGG: sma:SAV_7077 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal metazoa/fungi; adenylosuccinate lyase 469345..470763 Pseudonocardia dioxanivorans CB1190 10362239 YP_004330551.1 CDS Psed_0429 NC_015312.1 470760 471611 D PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: SAICAR synthetase; KEGG: sna:Snas_4833 phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 470760..471611 Pseudonocardia dioxanivorans CB1190 10362240 YP_004330552.1 CDS Psed_0430 NC_015312.1 471667 472410 D KEGG: rop:ROP_49090 hypothetical protein; hypothetical protein 471667..472410 Pseudonocardia dioxanivorans CB1190 10362241 YP_004330553.1 CDS Psed_0431 NC_015312.1 473078 473782 R KEGG: sen:SACE_7147 beta-lactamase-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(473078..473782) Pseudonocardia dioxanivorans CB1190 10362242 YP_004330554.1 CDS Psed_0432 NC_015312.1 473850 474083 D manually curated; TIGRFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; KEGG: svi:Svir_38000 phosphoribosylformylglycinamidine synthase, PurS protein; PFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; phosphoribosylformylglycinamidine synthase PurS 473850..474083 Pseudonocardia dioxanivorans CB1190 10362243 YP_004330555.1 CDS Psed_0433 NC_015312.1 474080 474766 D PFAM: CobB/CobQ-like glutamine amidotransferase; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; HAMAP: Phosphoribosylformylglycinamidine synthase I; KEGG: tpr:Tpau_3613 phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase 1 474080..474766 Pseudonocardia dioxanivorans CB1190 10362244 YP_004330556.1 CDS Psed_0434 NC_015312.1 474860 476053 D KEGG: mil:ML5_2885 response regulator receiver modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; Protein phosphatase 2C-like; response regulator receiver modulated serine phosphatase 474860..476053 Pseudonocardia dioxanivorans CB1190 10362245 YP_004330557.1 CDS Psed_0435 NC_015312.1 476050 477840 D KEGG: cwo:Cwoe_5360 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; CHASE3; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 476050..477840 Pseudonocardia dioxanivorans CB1190 10362246 YP_004330558.1 CDS Psed_0436 NC_015312.1 477837 478280 D KEGG: tcu:Tcur_1124 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 477837..478280 Pseudonocardia dioxanivorans CB1190 10362247 YP_004330559.1 CDS Psed_0438 NC_015312.1 478676 480961 D PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase II; HAMAP: Phosphoribosylformylglycinamidine synthase II; KEGG: sen:SACE_7142 phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase 2 478676..480961 Pseudonocardia dioxanivorans CB1190 10362249 YP_004330560.1 CDS Psed_0439 NC_015312.1 480954 481286 D KEGG: saq:Sare_0162 hypothetical protein; hypothetical protein 480954..481286 Pseudonocardia dioxanivorans CB1190 10362250 YP_004330561.1 CDS Psed_0440 NC_015312.1 481427 483631 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-3; KEGG: ami:Amir_6871 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 481427..483631 Pseudonocardia dioxanivorans CB1190 10362251 YP_004330562.1 CDS Psed_0441 NC_015312.1 483669 485252 D TIGRFAM: Amidophosphoribosyl transferase; KEGG: sen:SACE_7125 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase 483669..485252 Pseudonocardia dioxanivorans CB1190 10362252 YP_004330563.1 CDS Psed_0442 NC_015312.1 485605 486729 D TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: sen:SACE_7124 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; phosphoribosylformylglycinamidine cyclo-ligase 485605..486729 Pseudonocardia dioxanivorans CB1190 10362253 YP_004330564.1 CDS Psed_0443 NC_015312.1 487022 487717 R PFAM: NUDIX hydrolase domain; KEGG: sna:Snas_0306 NUDIX hydrolase; NUDIX hydrolase complement(487022..487717) Pseudonocardia dioxanivorans CB1190 10362254 YP_004330565.1 CDS Psed_0444 NC_015312.1 487877 488236 R KEGG: gob:Gobs_1106 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(487877..488236) Pseudonocardia dioxanivorans CB1190 10362255 YP_004330566.1 CDS Psed_0445 NC_015312.1 488238 489188 R KEGG: sgr:SGR_2260 hypothetical protein; hypothetical protein complement(488238..489188) Pseudonocardia dioxanivorans CB1190 10362256 YP_004330567.1 CDS Psed_0446 NC_015312.1 489360 489566 R KEGG: car:cauri_2161 hypothetical protein; hypothetical protein complement(489360..489566) Pseudonocardia dioxanivorans CB1190 10362257 YP_004330568.1 CDS Psed_0447 NC_015312.1 489740 490570 D KEGG: ami:Amir_6841 hypothetical protein; hypothetical protein 489740..490570 Pseudonocardia dioxanivorans CB1190 10362258 YP_004330569.1 CDS Psed_0448 NC_015312.1 490592 491680 R KEGG: ami:Amir_6837 folate-binding protein YgfZ; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; folate-binding protein YgfZ complement(490592..491680) Pseudonocardia dioxanivorans CB1190 10362259 YP_004330570.1 CDS Psed_0449 NC_015312.1 491677 492156 R PFAM: Ferric-uptake regulator; KEGG: ami:Amir_6836 ferric uptake regulator, Fur family; Fur family ferric uptake regulator complement(491677..492156) Pseudonocardia dioxanivorans CB1190 10362260 YP_004330571.1 CDS Psed_0450 NC_015312.1 492358 494766 D KEGG: lbz:LbrM34_V2.0530 proteophosphoglycan ppg4; hypothetical protein 492358..494766 Pseudonocardia dioxanivorans CB1190 10362261 YP_004330572.1 CDS Psed_0451 NC_015312.1 494812 496689 D KEGG: cbr:CBG02561 Hypothetical protein CBG02561; hypothetical protein 494812..496689 Pseudonocardia dioxanivorans CB1190 10362262 YP_004330573.1 CDS Psed_0452 NC_015312.1 496791 497435 R KEGG: ami:Amir_6831 hypothetical protein; HAMAP: Uncharacterised protein family UPF0678; PFAM: Domain of unknown function DUF1794; hypothetical protein complement(496791..497435) Pseudonocardia dioxanivorans CB1190 10362263 YP_004330574.1 CDS Psed_0453 NC_015312.1 497432 497539 R hypothetical protein complement(497432..497539) Pseudonocardia dioxanivorans CB1190 10362264 YP_004330575.1 CDS Psed_0454 NC_015312.1 497650 497949 R PFAM: Protein of unknown function DUF1416; KEGG: nfa:nfa5930 hypothetical protein; hypothetical protein complement(497650..497949) Pseudonocardia dioxanivorans CB1190 10362265 YP_004330576.1 CDS Psed_0455 NC_015312.1 497949 498788 R PFAM: Rhodanese-like; KEGG: ami:Amir_6828 rhodanese domain protein; SMART: Rhodanese-like; thiosulfate sulfurtransferase complement(497949..498788) Pseudonocardia dioxanivorans CB1190 10362266 YP_004330577.1 CDS Psed_0456 NC_015312.1 498785 499297 R KEGG: svi:Svir_37700 hypothetical protein; hypothetical protein complement(498785..499297) Pseudonocardia dioxanivorans CB1190 10362267 YP_004330578.1 CDS Psed_0457 NC_015312.1 499551 499985 R KEGG: amd:AMED_9010 thioredoxin; thioredoxin complement(499551..499985) Pseudonocardia dioxanivorans CB1190 10362268 YP_004330579.1 CDS Psed_0458 NC_015312.1 500036 500839 R KEGG: ami:Amir_6825 hypothetical protein; hypothetical protein complement(500036..500839) Pseudonocardia dioxanivorans CB1190 10362269 YP_004330580.1 CDS Psed_0459 NC_015312.1 501108 501866 D KEGG: ami:Amir_6823 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 501108..501866 Pseudonocardia dioxanivorans CB1190 10362270 YP_004330581.1 CDS Psed_0460 NC_015312.1 501915 502817 D KEGG: mil:ML5_2774 mycothiol biosynthesis acetyltransferase; TIGRFAM: Mycothiol biosynthesis protein, MshD; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; mycothiol biosynthesis acetyltransferase 501915..502817 Pseudonocardia dioxanivorans CB1190 10362271 YP_004330582.1 CDS Psed_0461 NC_015312.1 503033 504154 D KEGG: ami:Amir_6821 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1; phosphate ABC transporter substrate-binding protein 503033..504154 Pseudonocardia dioxanivorans CB1190 10362272 YP_004330583.1 CDS Psed_0462 NC_015312.1 504195 505265 D KEGG: ami:Amir_6820 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 504195..505265 Pseudonocardia dioxanivorans CB1190 10362273 YP_004330584.1 CDS Psed_0463 NC_015312.1 505300 506211 D KEGG: ami:Amir_6819 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 505300..506211 Pseudonocardia dioxanivorans CB1190 10362274 YP_004330585.1 CDS Psed_0464 NC_015312.1 506225 507001 D SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease 1; KEGG: msp:Mspyr1_10410 phosphate ABC transporter ATP-binding protein, PhoT family; PFAM: ABC transporter-like; phosphate ABC transporter ATPase 506225..507001 Pseudonocardia dioxanivorans CB1190 10362275 YP_004330586.1 CDS Psed_0465 NC_015312.1 507034 507690 R KEGG: amd:AMED_9002 phosphate transport system protein; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU complement(507034..507690) Pseudonocardia dioxanivorans CB1190 10362276 YP_004330587.1 CDS Psed_0466 NC_015312.1 507787 507996 R PFAM: Dodecin flavoprotein; KEGG: scb:SCAB_11251 hypothetical protein; hypothetical protein complement(507787..507996) Pseudonocardia dioxanivorans CB1190 10362277 YP_004330588.1 CDS Psed_0467 NC_015312.1 508025 508681 R KEGG: amd:AMED_9002 phosphate transport system protein; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU complement(508025..508681) Pseudonocardia dioxanivorans CB1190 10362278 YP_004330589.1 CDS Psed_0468 NC_015312.1 508783 511143 R KEGG: sen:SACE_7090 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator complement(508783..511143) Pseudonocardia dioxanivorans CB1190 10362279 YP_004330590.1 CDS Psed_0469 NC_015312.1 511287 512147 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: sen:SACE_7088 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(511287..512147) Pseudonocardia dioxanivorans CB1190 10362280 YP_004330591.1 CDS Psed_0470 NC_015312.1 512281 513456 R KEGG: sen:SACE_7086 dihydrouridine synthase TIM-barrel protein nifR3; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nifR3 family TIM-barrel protein complement(512281..513456) Pseudonocardia dioxanivorans CB1190 10362281 YP_004330592.1 CDS Psed_0471 NC_015312.1 513476 514063 R KEGG: svi:Svir_37580 hypothetical protein; hypothetical protein complement(513476..514063) Pseudonocardia dioxanivorans CB1190 10362282 YP_004330593.1 CDS Psed_0472 NC_015312.1 514193 514510 D KEGG: tfu:Tfu_1551 hypothetical protein; hypothetical protein 514193..514510 Pseudonocardia dioxanivorans CB1190 10362283 YP_004330594.1 CDS Psed_0473 NC_015312.1 514830 515498 D hypothetical protein 514830..515498 Pseudonocardia dioxanivorans CB1190 10362284 YP_004330595.1 CDS Psed_0475 NC_015312.1 516658 517959 R PFAM: Endoribonuclease L-PSP; KEGG: lhk:LHK_01898 endoribonuclease L-PSP; endoribonuclease L-PSP complement(516658..517959) Pseudonocardia dioxanivorans CB1190 10362286 YP_004330596.1 CDS Psed_0476 NC_015312.1 518157 518543 D KEGG: sen:SACE_0961 suppressor protein DnaK; suppressor protein DnaK 518157..518543 Pseudonocardia dioxanivorans CB1190 10362287 YP_004330597.1 CDS Psed_0477 NC_015312.1 518760 520193 D manually curated; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; KEGG: sgr:SGR_2706 transcriptional regulator; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 518760..520193 Pseudonocardia dioxanivorans CB1190 10362288 YP_004330598.1 CDS Psed_0478 NC_015312.1 520360 521601 D PFAM: Major facilitator superfamily MFS-1; KEGG: pol:Bpro_4134 major facilitator transporter; major facilitator superfamily protein 520360..521601 Pseudonocardia dioxanivorans CB1190 10362289 YP_004330599.1 CDS Psed_0479 NC_015312.1 521621 522205 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: msm:MSMEG_4136 dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase 521621..522205 Pseudonocardia dioxanivorans CB1190 10362290 YP_004330600.1 CDS Psed_0481 NC_015312.1 523020 524351 D PFAM: General substrate transporter; KEGG: rha:RHA1_ro06087 major facilitator transporter; general substrate transporter 523020..524351 Pseudonocardia dioxanivorans CB1190 10362293 YP_004330601.1 CDS Psed_0482 NC_015312.1 524383 525096 R PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: amd:AMED_0557 integral membrane protein; phosphoesterase PA-phosphatase-like protein complement(524383..525096) Pseudonocardia dioxanivorans CB1190 10362294 YP_004330602.1 CDS Psed_0483 NC_015312.1 525218 525535 D KEGG: mjl:Mjls_3508 hypothetical protein; hypothetical protein 525218..525535 Pseudonocardia dioxanivorans CB1190 10362295 YP_004330603.1 CDS Psed_0484 NC_015312.1 525678 526568 D PFAM: Abortive infection protein; KEGG: xce:Xcel_2718 abortive infection protein; abortive infection protein 525678..526568 Pseudonocardia dioxanivorans CB1190 10362296 YP_004330604.1 CDS Psed_0485 NC_015312.1 526575 526967 R KEGG: req:REQ_44380 hypothetical protein; hypothetical protein complement(526575..526967) Pseudonocardia dioxanivorans CB1190 10362297 YP_004330605.1 CDS Psed_0486 NC_015312.1 527012 527638 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fri:FraEuI1c_3546 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(527012..527638) Pseudonocardia dioxanivorans CB1190 10362298 YP_004330606.1 CDS Psed_0487 NC_015312.1 527716 527898 R hypothetical protein complement(527716..527898) Pseudonocardia dioxanivorans CB1190 10362299 YP_004330607.1 CDS Psed_0488 NC_015312.1 527933 529543 R KEGG: nda:Ndas_5034 cyclohexanone monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclohexanone monooxygenase complement(527933..529543) Pseudonocardia dioxanivorans CB1190 10362300 YP_004330608.1 CDS Psed_0489 NC_015312.1 529622 530530 R KEGG: pol:Bpro_5566 alpha/beta hydrolase fold-3; alpha/beta hydrolase complement(529622..530530) Pseudonocardia dioxanivorans CB1190 10362301 YP_004330609.1 CDS Psed_0490 NC_015312.1 530716 532443 D PFAM: Helix-turn-helix, Fis-type; RNA polymerase sigma factor 54, interaction; KEGG: rha:RHA1_ro00452 transcriptional regulator; Fis family transcriptional regulator 530716..532443 Pseudonocardia dioxanivorans CB1190 10362302 YP_004330610.1 CDS Psed_0493 NC_015312.1 533514 534506 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: cwo:Cwoe_1096 alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(533514..534506) Pseudonocardia dioxanivorans CB1190 10362306 YP_004330611.1 CDS Psed_0494 NC_015312.1 534689 535879 R PFAM: Cytochrome P450; KEGG: amd:AMED_4704 cytochrome P450; cytochrome P450 complement(534689..535879) Pseudonocardia dioxanivorans CB1190 10362307 YP_004330612.1 CDS Psed_0495 NC_015312.1 535977 537056 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_3550 transcriptional regulator, TetR family; TetR family transcriptional regulator 535977..537056 Pseudonocardia dioxanivorans CB1190 10362308 YP_004330613.1 CDS Psed_0496 NC_015312.1 537283 538416 R KEGG: ttr:Tter_1915 hypothetical protein; hypothetical protein complement(537283..538416) Pseudonocardia dioxanivorans CB1190 10362309 YP_004330614.1 CDS Psed_0497 NC_015312.1 538525 539277 R KEGG: rsa:RSal33209_1050 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(538525..539277) Pseudonocardia dioxanivorans CB1190 10362310 YP_004330615.1 CDS Psed_0498 NC_015312.1 539292 540356 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein complement(539292..540356) Pseudonocardia dioxanivorans CB1190 10362311 YP_004330616.1 CDS Psed_0499 NC_015312.1 540714 542360 D KEGG: nca:Noca_4137 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 540714..542360 Pseudonocardia dioxanivorans CB1190 10362312 YP_004330617.1 CDS Psed_0500 NC_015312.1 542464 543378 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nca:Noca_4120 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(542464..543378) Pseudonocardia dioxanivorans CB1190 10362313 YP_004330618.1 CDS Psed_0501 NC_015312.1 543402 543776 R KEGG: nca:Noca_4119 hypothetical protein; hypothetical protein complement(543402..543776) Pseudonocardia dioxanivorans CB1190 10362314 YP_004330619.1 CDS Psed_0502 NC_015312.1 543847 544101 D PFAM: Biotin/lipoyl attachment; KEGG: fre:Franean1_0965 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 543847..544101 Pseudonocardia dioxanivorans CB1190 10362315 YP_004330620.1 CDS Psed_0503 NC_015312.1 544098 544895 D PFAM: Crotonase, core; KEGG: nca:Noca_4110 short chain enoyl-CoA hydratase; enoyl-CoA hydratase 544098..544895 Pseudonocardia dioxanivorans CB1190 10362316 YP_004330621.1 CDS Psed_0504 NC_015312.1 544892 545335 D PFAM: MaoC-like dehydratase; KEGG: nca:Noca_4135 dehydratase; acyl dehydratase MaoC 544892..545335 Pseudonocardia dioxanivorans CB1190 10362317 YP_004330622.1 CDS Psed_0505 NC_015312.1 545332 546408 D PFAM: Aminoglycoside phosphotransferase; KEGG: nca:Noca_4129 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 545332..546408 Pseudonocardia dioxanivorans CB1190 10362318 YP_004330623.1 CDS Psed_0506 NC_015312.1 546570 547460 D KEGG: ade:Adeh_3688 response regulator receiver domain-containing protein; hypothetical protein 546570..547460 Pseudonocardia dioxanivorans CB1190 10362319 YP_004330624.1 CDS Psed_0507 NC_015312.1 547533 548189 R KEGG: gob:Gobs_3775 TetR family transcriptional regulator; manually curated; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator complement(547533..548189) Pseudonocardia dioxanivorans CB1190 10362320 YP_004330625.1 CDS Psed_0508 NC_015312.1 548383 549603 D PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: nca:Noca_4118 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; 3-ketoacyl-ACP synthase II 548383..549603 Pseudonocardia dioxanivorans CB1190 10362321 YP_004330626.1 CDS Psed_0509 NC_015312.1 549815 550996 D PFAM: Extracellular ligand-binding receptor; KEGG: nca:Noca_4117 extracellular ligand-binding receptor; ABC transporter substrate-binding protein 549815..550996 Pseudonocardia dioxanivorans CB1190 10362322 YP_004330627.1 CDS Psed_0510 NC_015312.1 551071 552603 D KEGG: nca:Noca_4116 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 551071..552603 Pseudonocardia dioxanivorans CB1190 10362323 YP_004330628.1 CDS Psed_0511 NC_015312.1 552607 553470 D PFAM: ABC transporter permease; KEGG: nca:Noca_4115 inner-membrane translocator; ABC transporter permease 552607..553470 Pseudonocardia dioxanivorans CB1190 10362324 YP_004330629.1 CDS Psed_0512 NC_015312.1 553488 554504 D PFAM: ABC transporter permease; KEGG: nca:Noca_4114 inner-membrane translocator; ABC transporter permease 553488..554504 Pseudonocardia dioxanivorans CB1190 10362325 YP_004330630.1 CDS Psed_0513 NC_015312.1 554501 555250 D PFAM: ABC transporter-like; KEGG: nca:Noca_4113 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 554501..555250 Pseudonocardia dioxanivorans CB1190 10362326 YP_004330631.1 CDS Psed_0514 NC_015312.1 555247 555966 D KEGG: nca:Noca_4112 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 555247..555966 Pseudonocardia dioxanivorans CB1190 10362327 YP_004330632.1 CDS Psed_0515 NC_015312.1 555975 557111 R manually curated; KEGG: ami:Amir_5665 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase complement(555975..557111) Pseudonocardia dioxanivorans CB1190 10362328 YP_004330633.1 CDS Psed_0516 NC_015312.1 557210 557977 D PFAM: Crotonase, core; KEGG: nca:Noca_4107 enoyl-CoA hydratase; enoyl-CoA hydratase 557210..557977 Pseudonocardia dioxanivorans CB1190 10362329 YP_004330634.1 CDS Psed_0517 NC_015312.1 557974 559371 D KEGG: ace:Acel_0874 propionyl-CoA carboxylase; PFAM: Carboxyl transferase; propionyl-CoA carboxylase 557974..559371 Pseudonocardia dioxanivorans CB1190 10362330 YP_004330635.1 CDS Psed_0518 NC_015312.1 559368 560012 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nca:Noca_4111 regulatory protein, TetR; TetR family transcriptional regulator 559368..560012 Pseudonocardia dioxanivorans CB1190 10362331 YP_004330636.1 CDS Psed_0519 NC_015312.1 560009 561259 D PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: nca:Noca_4134 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 560009..561259 Pseudonocardia dioxanivorans CB1190 10362332 YP_004330637.1 CDS Psed_0520 NC_015312.1 561256 562089 D KEGG: nca:Noca_4133 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 561256..562089 Pseudonocardia dioxanivorans CB1190 10362333 YP_004330638.1 CDS Psed_0521 NC_015312.1 562107 562523 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: nca:Noca_4132 hypothetical protein; hypothetical protein 562107..562523 Pseudonocardia dioxanivorans CB1190 10362334 YP_004330639.1 CDS Psed_0522 NC_015312.1 562520 563671 D KEGG: nca:Noca_4131 lipid-transfer protein; propanoyl-CoA C-acyltransferase 562520..563671 Pseudonocardia dioxanivorans CB1190 10362335 YP_004330640.1 CDS Psed_0523 NC_015312.1 563683 564981 D KEGG: nca:Noca_4130 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; (R)-benzylsuccinyl-CoA dehydrogenase 563683..564981 Pseudonocardia dioxanivorans CB1190 10362336 YP_004330641.1 CDS Psed_0524 NC_015312.1 564993 566099 D PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: fri:FraEuI1c_5059 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 564993..566099 Pseudonocardia dioxanivorans CB1190 10362337 YP_004330642.1 CDS Psed_0525 NC_015312.1 566152 568437 R KEGG: scb:SCAB_6041 SecDF protein-export membrane protein; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; SecF protein; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecD complement(566152..568437) Pseudonocardia dioxanivorans CB1190 10362338 YP_004330643.1 CDS Psed_0526 NC_015312.1 568495 568857 R hypothetical protein complement(568495..568857) Pseudonocardia dioxanivorans CB1190 10362339 YP_004330644.1 CDS Psed_0527 NC_015312.1 569280 570593 D KEGG: acd:AOLE_11755 hypothetical protein; hypothetical protein 569280..570593 Pseudonocardia dioxanivorans CB1190 10362340 YP_004330645.1 CDS Psed_0528 NC_015312.1 570663 571265 R PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: nca:Noca_4462 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein complement(570663..571265) Pseudonocardia dioxanivorans CB1190 10362341 YP_004330646.1 CDS Psed_0529 NC_015312.1 571324 571788 R hypothetical protein complement(571324..571788) Pseudonocardia dioxanivorans CB1190 10362342 YP_004330647.1 CDS Psed_0530 NC_015312.1 571984 572319 D KEGG: amd:AMED_5389 hypothetical protein; hypothetical protein 571984..572319 Pseudonocardia dioxanivorans CB1190 10362343 YP_004330648.1 CDS Psed_0531 NC_015312.1 572476 572715 D KEGG: pmb:A9601_05461 G3E family GTPase; G3E family GTPase 572476..572715 Pseudonocardia dioxanivorans CB1190 10362344 YP_004330649.1 CDS Psed_0532 NC_015312.1 572838 573491 R PFAM: Cation efflux protein; KEGG: mil:ML5_5458 cation efflux protein; cation efflux protein complement(572838..573491) Pseudonocardia dioxanivorans CB1190 10362345 YP_004330650.1 CDS Psed_0533 NC_015312.1 573488 573895 R KEGG: stp:Strop_1675 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(573488..573895) Pseudonocardia dioxanivorans CB1190 10362346 YP_004330651.1 CDS Psed_0534 NC_015312.1 573902 575026 D PFAM: Alanine racemase, N-terminal; KEGG: aau:AAur_0212 alanine racemase N-terminal domain-containing protein; alanine racemase 573902..575026 Pseudonocardia dioxanivorans CB1190 10362347 YP_004330652.1 CDS Psed_0535 NC_015312.1 575067 575747 R PFAM: Uncharacterised protein family UPF0272; KEGG: fri:FraEuI1c_0110 protein of unknown function DUF111; hypothetical protein complement(575067..575747) Pseudonocardia dioxanivorans CB1190 10362348 YP_004330653.1 CDS Psed_0536 NC_015312.1 575828 576136 R KEGG: mxa:MXAN_4234 hypothetical protein; hypothetical protein complement(575828..576136) Pseudonocardia dioxanivorans CB1190 10362349 YP_004330654.1 CDS Psed_0537 NC_015312.1 576374 577120 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: apb:SAR116_0795 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 576374..577120 Pseudonocardia dioxanivorans CB1190 10362350 YP_004330655.1 CDS Psed_0538 NC_015312.1 583070 584176 R PFAM: Dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase, class 2; KEGG: tfu:Tfu_0927 dihydroorotate dehydrogenase 2; dihydroorotate dehydrogenase complement(583070..584176) Pseudonocardia dioxanivorans CB1190 10362354 YP_004330656.1 CDS Psed_0539 NC_015312.1 584213 584584 R KEGG: tfu:Tfu_1642 RNA-binding S4; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein complement(584213..584584) Pseudonocardia dioxanivorans CB1190 10362355 YP_004330657.1 CDS Psed_0540 NC_015312.1 584602 585399 R KEGG: rha:RHA1_ro01770 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(584602..585399) Pseudonocardia dioxanivorans CB1190 10362356 YP_004330658.1 CDS Psed_0541 NC_015312.1 585401 585736 R KEGG: aac:Aaci_0812 ethyl tert-butyl ether degradation EthD; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD complement(585401..585736) Pseudonocardia dioxanivorans CB1190 10362357 YP_004330659.1 CDS Psed_0542 NC_015312.1 585803 587302 D KEGG: sen:SACE_3387 bile acid-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 585803..587302 Pseudonocardia dioxanivorans CB1190 10362358 YP_004330660.1 CDS Psed_0543 NC_015312.1 587299 587961 D PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: reu:Reut_B4781 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 587299..587961 Pseudonocardia dioxanivorans CB1190 10362359 YP_004330661.1 CDS Psed_0544 NC_015312.1 588066 590009 R TIGRFAM: Glycoside hydrolase, family 77; KEGG: mgi:Mflv_0996 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; 4-alpha-glucanotransferase complement(588066..590009) Pseudonocardia dioxanivorans CB1190 10362360 YP_004330662.1 CDS Psed_0545 NC_015312.1 590233 593448 D PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: lma:LmjF35.0540 proteophosphoglycan 5; Cna B domain-containing protein 590233..593448 Pseudonocardia dioxanivorans CB1190 10362361 YP_004330663.1 CDS Psed_0546 NC_015312.1 593445 594290 D PFAM: Alpha/beta hydrolase fold-1; KEGG: req:REQ_42200 alpha/beta hydrolase; alpha/beta hydrolase 593445..594290 Pseudonocardia dioxanivorans CB1190 10362362 YP_004330664.1 CDS Psed_0547 NC_015312.1 594294 594983 R PFAM: Acetoacetate decarboxylase; KEGG: sro:Sros_1360 hypothetical protein; acetoacetate decarboxylase complement(594294..594983) Pseudonocardia dioxanivorans CB1190 10362363 YP_004330665.1 CDS Psed_0548 NC_015312.1 595142 599347 D TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; PAS fold-3; GAF; ATPase-like, ATP-binding domain; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: gob:Gobs_0116 multi-sensor signal transduction histidine kinase; SMART: Protein phosphatase 2C-like; Signal transduction response regulator, receiver domain; PAC motif; GAF; PAS/PAC sensor protein 595142..599347 Pseudonocardia dioxanivorans CB1190 10362364 YP_004330666.1 CDS Psed_0549 NC_015312.1 599568 600095 D PFAM: Cysteine dioxygenase type I; KEGG: nda:Ndas_1387 cysteine dioxygenase type I; cysteine dioxygenase type I 599568..600095 Pseudonocardia dioxanivorans CB1190 10362365 YP_004330667.1 CDS Psed_0550 NC_015312.1 600092 600469 D SMART: Rhodanese-like; KEGG: gob:Gobs_4874 rhodanese domain-containing protein; rhodanese-like protein 600092..600469 Pseudonocardia dioxanivorans CB1190 10362366 YP_004330668.1 CDS Psed_0551 NC_015312.1 600462 601652 R KEGG: gob:Gobs_2382 glutaryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; glutaryl-CoA dehydrogenase complement(600462..601652) Pseudonocardia dioxanivorans CB1190 10362367 YP_004330669.1 CDS Psed_0552 NC_015312.1 601714 602412 D KEGG: cai:Caci_7507 protein of unknown function DUF1275; manually curated; PFAM: Protein of unknown function DUF1275; hypothetical protein 601714..602412 Pseudonocardia dioxanivorans CB1190 10362368 YP_004330670.1 CDS Psed_0553 NC_015312.1 602458 606699 R TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605; KEGG: svi:Svir_13420 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal; ATP-dependent helicase HrpA complement(602458..606699) Pseudonocardia dioxanivorans CB1190 10362369 YP_004330671.1 CDS Psed_0554 NC_015312.1 606729 606989 R KEGG: gob:Gobs_2136 hypothetical protein; hypothetical protein complement(606729..606989) Pseudonocardia dioxanivorans CB1190 10362370 YP_004330672.1 CDS Psed_0555 NC_015312.1 607359 607862 R KEGG: ago:AGOS_ACL074W hypothetical protein; hypothetical protein complement(607359..607862) Pseudonocardia dioxanivorans CB1190 10362371 YP_004330673.1 CDS Psed_0556 NC_015312.1 608016 608840 R PFAM: Beta-lactamase-related; KEGG: amd:AMED_2723 beta-lactamase class C; beta-lactamase complement(608016..608840) Pseudonocardia dioxanivorans CB1190 10362372 YP_004330674.1 CDS Psed_0557 NC_015312.1 608858 609760 D PFAM: Protein of unknown function DUF72; KEGG: sen:SACE_3121 hypothetical protein; hypothetical protein 608858..609760 Pseudonocardia dioxanivorans CB1190 10362373 YP_004330675.1 CDS Psed_0558 NC_015312.1 609753 610940 R PFAM: Major facilitator superfamily MFS-1; KEGG: mau:Micau_0410 major facilitator superfamily protein; major facilitator superfamily protein complement(609753..610940) Pseudonocardia dioxanivorans CB1190 10362374 YP_004330676.1 CDS Psed_0559 NC_015312.1 611023 612627 R KEGG: rha:RHA1_ro10402 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(611023..612627) Pseudonocardia dioxanivorans CB1190 10362375 YP_004330677.1 CDS Psed_0560 NC_015312.1 612706 612909 R KEGG: nda:Ndas_0433 protein of unknown function DUF1271; hypothetical protein complement(612706..612909) Pseudonocardia dioxanivorans CB1190 10362376 YP_004330678.1 CDS Psed_0561 NC_015312.1 613009 613230 R hypothetical protein complement(613009..613230) Pseudonocardia dioxanivorans CB1190 10362377 YP_004330679.1 CDS Psed_0562 NC_015312.1 613378 615267 R KEGG: nml:Namu_2393 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; acetate--CoA ligase complement(613378..615267) Pseudonocardia dioxanivorans CB1190 10362378 YP_004330680.1 CDS Psed_0563 NC_015312.1 615547 616887 D PFAM: Lipase, GDSL; KEGG: bxe:Bxe_A0297 lipase/acylhydrolase; G-D-S-L family lipolytic protein 615547..616887 Pseudonocardia dioxanivorans CB1190 10362379 YP_004330681.1 CDS Psed_0564 NC_015312.1 617197 617658 R KEGG: svi:Svir_37150 hypothetical protein; hypothetical protein complement(617197..617658) Pseudonocardia dioxanivorans CB1190 10362380 YP_004330682.1 CDS Psed_0565 NC_015312.1 617696 617917 R PFAM: Heavy metal transport/detoxification protein; KEGG: gbr:Gbro_4238 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein complement(617696..617917) Pseudonocardia dioxanivorans CB1190 10362381 YP_004330683.1 CDS Psed_0566 NC_015312.1 617984 618265 R PFAM: Protein of unknown function DUF156; KEGG: amd:AMED_6896 hypothetical protein; hypothetical protein complement(617984..618265) Pseudonocardia dioxanivorans CB1190 10362382 YP_004330684.1 CDS Psed_0567 NC_015312.1 618560 618793 D KEGG: ami:Amir_6795 hypothetical protein; hypothetical protein 618560..618793 Pseudonocardia dioxanivorans CB1190 10362383 YP_004330685.1 CDS Psed_0568 NC_015312.1 619449 621002 R PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_4676 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein complement(619449..621002) Pseudonocardia dioxanivorans CB1190 10362387 YP_004330686.1 CDS Psed_0569 NC_015312.1 620999 621619 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_4675 TetR family transcriptional regulator; TetR family transcriptional regulator complement(620999..621619) Pseudonocardia dioxanivorans CB1190 10362388 YP_004330687.1 CDS Psed_0570 NC_015312.1 622067 622471 D KEGG: cai:Caci_0444 ricin B lectin; ricin B lectin 622067..622471 Pseudonocardia dioxanivorans CB1190 10362389 YP_004330688.1 CDS Psed_0571 NC_015312.1 622511 625210 R PFAM: Polysaccharide deacetylase; Glycosyl transferase, family 2; KEGG: sco:SCO4554 bi-functional transferase/deacetylase; polysaccharide deacetylase complement(622511..625210) Pseudonocardia dioxanivorans CB1190 10362390 YP_004330689.1 CDS Psed_0572 NC_015312.1 625207 625740 R KEGG: scb:SCAB_55801 hypothetical protein; hypothetical protein complement(625207..625740) Pseudonocardia dioxanivorans CB1190 10362391 YP_004330690.1 CDS Psed_0573 NC_015312.1 625737 626738 R KEGG: sna:Snas_4397 hydrolase transmembrane protein; hydrolase transmembrane protein complement(625737..626738) Pseudonocardia dioxanivorans CB1190 10362392 YP_004330691.1 CDS Psed_0574 NC_015312.1 627067 629274 R PFAM: Polysaccharide deacetylase; Glycosyl transferase, family 2; KEGG: svi:Svir_26930 glycosyl transferase; polysaccharide deacetylase complement(627067..629274) Pseudonocardia dioxanivorans CB1190 10362393 YP_004330692.1 CDS Psed_0575 NC_015312.1 629271 630128 R KEGG: vcn:VOLCADRAFT_104860 hypothetical protein; hypothetical protein complement(629271..630128) Pseudonocardia dioxanivorans CB1190 10362394 YP_004330693.1 CDS Psed_0576 NC_015312.1 630659 631267 D KEGG: cai:Caci_0444 ricin B lectin; hypothetical protein 630659..631267 Pseudonocardia dioxanivorans CB1190 10362395 YP_004330694.1 CDS Psed_0577 NC_015312.1 631329 631817 R KEGG: sen:SACE_1607 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(631329..631817) Pseudonocardia dioxanivorans CB1190 10362396 YP_004330695.1 CDS Psed_0578 NC_015312.1 631872 632393 D PFAM: Cupin 2, conserved barrel; KEGG: sro:Sros_8205 hypothetical protein; cupin 631872..632393 Pseudonocardia dioxanivorans CB1190 10362397 YP_004330696.1 CDS Psed_0579 NC_015312.1 632425 633042 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nml:Namu_2350 TetR family transcriptional regulator; TetR family transcriptional regulator 632425..633042 Pseudonocardia dioxanivorans CB1190 10362398 YP_004330697.1 CDS Psed_0580 NC_015312.1 633287 634027 R KEGG: bmj:BMULJ_03470 highly repetitive protein; highly repetitive protein complement(633287..634027) Pseudonocardia dioxanivorans CB1190 10362399 YP_004330698.1 CDS Psed_0581 NC_015312.1 634636 634839 D KEGG: tcu:Tcur_2880 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 634636..634839 Pseudonocardia dioxanivorans CB1190 10362400 YP_004330699.1 CDS Psed_0582 NC_015312.1 635243 635770 D KEGG: amd:AMED_8800 hypothetical protein; hypothetical protein 635243..635770 Pseudonocardia dioxanivorans CB1190 10362401 YP_004330700.1 CDS Psed_0583 NC_015312.1 636039 637385 D PFAM: Protein of unknown function DUF445, transmembrane; KEGG: ami:Amir_6776 protein of unknown function DUF445; hypothetical protein 636039..637385 Pseudonocardia dioxanivorans CB1190 10362402 YP_004330701.1 CDS Psed_0584 NC_015312.1 637671 638687 D SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: amd:AMED_5929 ATPase component of ABC-type multidrug transport system; PFAM: ABC transporter-like; daunorubicin resistance ABC transporter ATPase subunit 637671..638687 Pseudonocardia dioxanivorans CB1190 10362403 YP_004330702.1 CDS Psed_0585 NC_015312.1 638684 639487 D PFAM: ABC-2 type transporter; KEGG: amd:AMED_5930 ABC-2 type transporter; ABC transporter 638684..639487 Pseudonocardia dioxanivorans CB1190 10362404 YP_004330703.1 CDS Psed_0586 NC_015312.1 639513 639881 R TIGRFAM: Camphor resistance CrcB protein; HAMAP: Camphor resistance CrcB protein; KEGG: scb:SCAB_83531 integral membrane protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein complement(639513..639881) Pseudonocardia dioxanivorans CB1190 10362405 YP_004330704.1 CDS Psed_0587 NC_015312.1 639878 640366 R TIGRFAM: Camphor resistance CrcB protein; HAMAP: Camphor resistance CrcB protein; KEGG: fri:FraEuI1c_4222 CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein complement(639878..640366) Pseudonocardia dioxanivorans CB1190 10362406 YP_004330705.1 CDS Psed_0588 NC_015312.1 640527 640976 D KEGG: sen:SACE_6990 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 640527..640976 Pseudonocardia dioxanivorans CB1190 10362407 YP_004330706.1 CDS Psed_0589 NC_015312.1 640982 641782 D KEGG: amd:AMED_0427 membrane spanning protein; hypothetical protein 640982..641782 Pseudonocardia dioxanivorans CB1190 10362408 YP_004330707.1 CDS Psed_0590 NC_015312.1 641940 642293 D PFAM: Protein of unknown function DUF2516; KEGG: sen:SACE_6988 hypothetical protein; hypothetical protein 641940..642293 Pseudonocardia dioxanivorans CB1190 10362409 YP_004330708.1 CDS Psed_0591 NC_015312.1 642290 642847 D PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: ami:Amir_6768 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 642290..642847 Pseudonocardia dioxanivorans CB1190 10362410 YP_004330709.1 CDS Psed_0592 NC_015312.1 642937 645252 D SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: mau:Micau_3432 ATP-dependent protease La; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal; anti-sigma H sporulation factor LonB 642937..645252 Pseudonocardia dioxanivorans CB1190 10362411 YP_004330710.1 CDS Psed_0593 NC_015312.1 645414 646355 R TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: amd:AMED_0445 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase complement(645414..646355) Pseudonocardia dioxanivorans CB1190 10362412 YP_004330711.1 CDS Psed_0594 NC_015312.1 646439 647614 D PFAM: Major facilitator superfamily MFS-1; KEGG: dat:HRM2_33900 permease of the major facilitator superfamily; major facilitator superfamily protein 646439..647614 Pseudonocardia dioxanivorans CB1190 10362413 YP_004330712.1 CDS Psed_0595 NC_015312.1 647583 648089 R PFAM: Protein of unknown function DUF2505; KEGG: sen:SACE_6979 hypothetical protein; hypothetical protein complement(647583..648089) Pseudonocardia dioxanivorans CB1190 10362414 YP_004330713.1 CDS Psed_0596 NC_015312.1 648114 649193 D KEGG: ami:Amir_6761 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; UDP-N-acetylenolpyruvoylglucosamine reductase 648114..649193 Pseudonocardia dioxanivorans CB1190 10362415 YP_004330714.1 CDS Psed_0597 NC_015312.1 649335 650522 D PFAM: YkuD domain; KEGG: nfa:nfa51960 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 649335..650522 Pseudonocardia dioxanivorans CB1190 10362416 YP_004330715.1 CDS Psed_0598 NC_015312.1 650548 651564 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: ach:Achl_2099 alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(650548..651564) Pseudonocardia dioxanivorans CB1190 10362417 YP_004330716.1 CDS Psed_0599 NC_015312.1 651566 652312 R KEGG: ami:Amir_6759 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; serine 3-dehydrogenase complement(651566..652312) Pseudonocardia dioxanivorans CB1190 10362418 YP_004330717.1 CDS Psed_0600 NC_015312.1 652349 652639 R PFAM: Protein of unknown function DUF2530; KEGG: ami:Amir_0487 hypothetical protein; hypothetical protein complement(652349..652639) Pseudonocardia dioxanivorans CB1190 10362419 YP_004330718.1 CDS Psed_0601 NC_015312.1 652676 654232 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: amd:AMED_8482 MFS transporter, xanthine/uracil permease; xanthine/uracil/vitamin C permease 652676..654232 Pseudonocardia dioxanivorans CB1190 10362420 YP_004330719.1 CDS Psed_0602 NC_015312.1 654312 655628 D PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_0490 major facilitator superfamily MFS_1; major facilitator superfamily protein 654312..655628 Pseudonocardia dioxanivorans CB1190 10362421 YP_004330720.1 CDS Psed_0603 NC_015312.1 655724 656470 R KEGG: kfl:Kfla_2555 hypothetical protein; hypothetical protein complement(655724..656470) Pseudonocardia dioxanivorans CB1190 10362422 YP_004330721.1 CDS Psed_0604 NC_015312.1 656482 657618 D KEGG: ade:Adeh_0244 LigA; hypothetical protein 656482..657618 Pseudonocardia dioxanivorans CB1190 10362423 YP_004330722.1 CDS Psed_0605 NC_015312.1 657561 659069 R KEGG: amd:AMED_8474 hypothetical protein; hypothetical protein complement(657561..659069) Pseudonocardia dioxanivorans CB1190 10362424 YP_004330723.1 CDS Psed_0607 NC_015312.1 660273 660845 D KEGG: amd:AMED_8472 hypothetical protein; hypothetical protein 660273..660845 Pseudonocardia dioxanivorans CB1190 10362426 YP_004330724.1 CDS Psed_0608 NC_015312.1 660855 662309 R KEGG: sen:SACE_0629 hypothetical protein; hypothetical protein complement(660855..662309) Pseudonocardia dioxanivorans CB1190 10362427 YP_004330725.1 CDS Psed_0609 NC_015312.1 662598 663731 R PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase, Mycobacterial-type; HAMAP: Phosphoserine aminotransferase; KEGG: msp:Mspyr1_11040 phosphoserine aminotransferase; phosphoserine aminotransferase complement(662598..663731) Pseudonocardia dioxanivorans CB1190 10362428 YP_004330726.1 CDS Psed_0610 NC_015312.1 663920 665092 R KEGG: amd:AMED_8451 citrate synthase; PFAM: Citrate synthase-like; citrate (Si)-synthase complement(663920..665092) Pseudonocardia dioxanivorans CB1190 10362429 YP_004330727.1 CDS Psed_0611 NC_015312.1 665365 666024 D PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: amd:AMED_8441 pyridoxamine 5'-phosphate oxidase; pyridoxine/pyridoxamine 5'-phosphate oxidase 665365..666024 Pseudonocardia dioxanivorans CB1190 10362430 YP_004330728.1 CDS Psed_0612 NC_015312.1 666122 667615 D PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_0642 major facilitator superfamily multidrug resistance protein; major facilitator superfamily protein 666122..667615 Pseudonocardia dioxanivorans CB1190 10362431 YP_004330729.1 CDS Psed_0613 NC_015312.1 667721 669025 D TIGRFAM: Citrate synthase, type II; KEGG: svi:Svir_33600 citrate synthase; PFAM: Citrate synthase-like; citrate synthase I 667721..669025 Pseudonocardia dioxanivorans CB1190 10362432 YP_004330730.1 CDS Psed_0614 NC_015312.1 669131 670519 D KEGG: rer:RER_45790 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; deoxyribodipyrimidine photo-lyase 669131..670519 Pseudonocardia dioxanivorans CB1190 10362433 YP_004330731.1 CDS Psed_0615 NC_015312.1 670574 671947 D KEGG: mgm:Mmc1_2162 TPR repeat-containing protein; hypothetical protein 670574..671947 Pseudonocardia dioxanivorans CB1190 10362434 YP_004330732.1 CDS Psed_0616 NC_015312.1 672287 672931 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sgr:SGR_3980 TetR family transcriptional regulator; TetR family transcriptional regulator complement(672287..672931) Pseudonocardia dioxanivorans CB1190 10362435 YP_004330733.1 CDS Psed_0617 NC_015312.1 672984 674543 D KEGG: cai:Caci_5384 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 672984..674543 Pseudonocardia dioxanivorans CB1190 10362436 YP_004330734.1 CDS Psed_0618 NC_015312.1 674540 675727 R KEGG: ami:Amir_0532 ABC-type Na+ efflux pump permease component; Na+ efflux pump ABC transporter permease complement(674540..675727) Pseudonocardia dioxanivorans CB1190 10362437 YP_004330735.1 CDS Psed_0619 NC_015312.1 675724 676626 R PFAM: ABC transporter-like; KEGG: amd:AMED_2105 ABC transport system ATP-binding protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase complement(675724..676626) Pseudonocardia dioxanivorans CB1190 10362438 YP_004330736.1 CDS Psed_0620 NC_015312.1 676671 677414 R KEGG: tfu:Tfu_1277 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(676671..677414) Pseudonocardia dioxanivorans CB1190 10362439 YP_004330737.1 CDS Psed_0621 NC_015312.1 677431 679392 R KEGG: has:Halsa_0700 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, 4TM/12TM fusion protein complement(677431..679392) Pseudonocardia dioxanivorans CB1190 10362440 YP_004330738.1 CDS Psed_0622 NC_015312.1 679389 680201 R PFAM: Alpha/beta hydrolase fold-1; KEGG: pol:Bpro_1857 3-oxoadipate enol-lactonase; alpha/beta hydrolase complement(679389..680201) Pseudonocardia dioxanivorans CB1190 10362441 YP_004330739.1 CDS Psed_0623 NC_015312.1 680188 681681 R KEGG: rop:ROP_29740 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(680188..681681) Pseudonocardia dioxanivorans CB1190 10362442 YP_004330740.1 CDS Psed_0624 NC_015312.1 681678 682745 R PFAM: Luciferase-like, subgroup; KEGG: bts:Btus_1633 luciferase-like, subgroup; luciferase-like protein complement(681678..682745) Pseudonocardia dioxanivorans CB1190 10362443 YP_004330741.1 CDS Psed_0625 NC_015312.1 682760 683761 R TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: hje:HacjB3_10950 hypothetical protein; TRAP transporter solute receptor, TAXI family complement(682760..683761) Pseudonocardia dioxanivorans CB1190 10362444 YP_004330742.1 CDS Psed_0626 NC_015312.1 683879 684283 R PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: amd:AMED_3868 hypothetical protein; hypothetical protein complement(683879..684283) Pseudonocardia dioxanivorans CB1190 10362445 YP_004330743.1 CDS Psed_0627 NC_015312.1 684280 685458 R KEGG: bts:Btus_1262 thiolase; thiolase complement(684280..685458) Pseudonocardia dioxanivorans CB1190 10362446 YP_004330744.1 CDS Psed_0628 NC_015312.1 685729 687639 R PFAM: Helix-turn-helix, Fis-type; GAF; KEGG: amd:AMED_4322 Fis family transcriptional regulator; Fis family transcriptional regulator complement(685729..687639) Pseudonocardia dioxanivorans CB1190 10362447 YP_004330745.1 CDS Psed_0629 NC_015312.1 687992 689644 D KEGG: amd:AMED_4324 methane monooxygenase; PFAM: Methane/phenol/toluene hydroxylase; methane monooxygenase 687992..689644 Pseudonocardia dioxanivorans CB1190 10362448 YP_004330746.1 CDS Psed_0630 NC_015312.1 689747 690802 D KEGG: amd:AMED_4325 CDP-6-deoxy-delta-3,4-glucoseen reductase; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; ferredoxin--NAD(+) reductase 689747..690802 Pseudonocardia dioxanivorans CB1190 10362449 YP_004330747.1 CDS Psed_0631 NC_015312.1 690799 691986 D PFAM: Methane/phenol/toluene hydroxylase; KEGG: amd:AMED_4326 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 690799..691986 Pseudonocardia dioxanivorans CB1190 10362450 YP_004330748.1 CDS Psed_0632 NC_015312.1 691983 692360 D PFAM: Monooxygenase component MmoB/DmpM; KEGG: amd:AMED_4327 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 691983..692360 Pseudonocardia dioxanivorans CB1190 10362451 YP_004330749.1 CDS Psed_0633 NC_015312.1 692489 694174 D KEGG: amd:AMED_4331 chaperonin GroEL; TIGRFAM: Chaperonin Cpn60; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 692489..694174 Pseudonocardia dioxanivorans CB1190 10362452 YP_004330750.1 CDS Psed_0634 NC_015312.1 694268 695410 D PFAM: Amidohydrolase 2; KEGG: sen:SACE_6395 amidohydrolase 2; amidohydrolase 694268..695410 Pseudonocardia dioxanivorans CB1190 10362453 YP_004330751.1 CDS Psed_0635 NC_015312.1 695558 696973 D PFAM: Major facilitator superfamily MFS-1; KEGG: sna:Snas_0952 general substrate transporter; major facilitator superfamily protein 695558..696973 Pseudonocardia dioxanivorans CB1190 10362454 YP_004330752.1 CDS Psed_0636 NC_015312.1 697001 697699 R KEGG: ami:Amir_0553 AIG2 family protein; AIG2 family protein complement(697001..697699) Pseudonocardia dioxanivorans CB1190 10362455 YP_004330753.1 CDS Psed_0637 NC_015312.1 697723 698691 D TIGRFAM: translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; KEGG: cai:Caci_3517 translation initiation factor, aIF-2BI family; PFAM: Initiation factor 2B-related; translation initiation factor, aIF-2BI family 697723..698691 Pseudonocardia dioxanivorans CB1190 10362456 YP_004330754.1 CDS Psed_0638 NC_015312.1 698688 699836 D PFAM: Major facilitator superfamily MFS-1; KEGG: nda:Ndas_0293 major facilitator superfamily MFS_1; major facilitator superfamily protein 698688..699836 Pseudonocardia dioxanivorans CB1190 10362457 YP_004330755.1 CDS Psed_0639 NC_015312.1 699915 700286 D hypothetical protein 699915..700286 Pseudonocardia dioxanivorans CB1190 10362458 YP_004330756.1 CDS Psed_0640 NC_015312.1 700334 700960 R KEGG: svi:Svir_18790 Zn-dependent hydrolase, glyoxylase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(700334..700960) Pseudonocardia dioxanivorans CB1190 10362459 YP_004330757.1 CDS Psed_0641 NC_015312.1 700960 702045 R SMART: Polyketide synthase, enoylreductase; TIGRFAM: Formaldehyde dehydrogenase, mycothiol-dependent; KEGG: mil:ML5_5136 mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; mycothiol-dependent formaldehyde dehydrogenase complement(700960..702045) Pseudonocardia dioxanivorans CB1190 10362460 YP_004330758.1 CDS Psed_0642 NC_015312.1 702173 702925 D PFAM: Crotonase, core; KEGG: rha:RHA1_ro10427 enoyl-CoA hydratase; enoyl-CoA hydratase 702173..702925 Pseudonocardia dioxanivorans CB1190 10362461 YP_004330759.1 CDS Psed_0643 NC_015312.1 703125 704288 D KEGG: nda:Ndas_1870 fumarylacetoacetase; PFAM: Fumarylacetoacetase, C-terminal-like; Fumarylacetoacetase 703125..704288 Pseudonocardia dioxanivorans CB1190 10362462 YP_004330760.1 CDS Psed_0644 NC_015312.1 704325 704744 R PFAM: Thioesterase superfamily; KEGG: mjl:Mjls_2763 thioesterase superfamily protein; thioesterase complement(704325..704744) Pseudonocardia dioxanivorans CB1190 10362463 YP_004330761.1 CDS Psed_0645 NC_015312.1 704741 705064 R PFAM: Cupin 2, conserved barrel; KEGG: kfl:Kfla_0197 cupin 2 conserved barrel domain protein; cupin complement(704741..705064) Pseudonocardia dioxanivorans CB1190 10362464 YP_004330762.1 CDS Psed_0646 NC_015312.1 705162 705404 D hypothetical protein 705162..705404 Pseudonocardia dioxanivorans CB1190 10362465 YP_004330763.1 CDS Psed_0647 NC_015312.1 705522 706313 R KEGG: tcu:Tcur_1157 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(705522..706313) Pseudonocardia dioxanivorans CB1190 10362466 YP_004330764.1 CDS Psed_0648 NC_015312.1 706423 707643 D TIGRFAM: Thiolase; KEGG: nca:Noca_4563 acetyl-CoA acetyltransferases; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase 706423..707643 Pseudonocardia dioxanivorans CB1190 10362467 YP_004330765.1 CDS Psed_0649 NC_015312.1 707645 709807 D KEGG: sma:SAV_1680 fatty acid oxidation complex alpha-subunit; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxybutyryl-CoA epimerase 707645..709807 Pseudonocardia dioxanivorans CB1190 10362468 YP_004330766.1 CDS Psed_0650 NC_015312.1 709924 711030 R TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase, predicted; KEGG: sgr:SGR_459 carboxylate-amine ligase; PFAM: Glutamate--cysteine ligase, GCS2; carboxylate-amine ligase ybdK complement(709924..711030) Pseudonocardia dioxanivorans CB1190 10362469 YP_004330767.1 CDS Psed_0651 NC_015312.1 711117 711890 D KEGG: sen:SACE_1903 response regulator receiver/ANTAR domain-containing protein; PFAM: ANTAR; SMART: GAF; ANTAR domain-containing protein 711117..711890 Pseudonocardia dioxanivorans CB1190 10362470 YP_004330768.1 CDS Psed_0652 NC_015312.1 711838 713145 R KEGG: amd:AMED_1255 hypothetical protein; hypothetical protein complement(711838..713145) Pseudonocardia dioxanivorans CB1190 10362471 YP_004330769.1 CDS Psed_0653 NC_015312.1 713336 713626 D KEGG: gob:Gobs_0179 stress responsive alpha-beta barrel domain-containing protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; stress responsive alpha-beta barrel domain-containing protein 713336..713626 Pseudonocardia dioxanivorans CB1190 10362472 YP_004330770.1 CDS Psed_0654 NC_015312.1 713693 714601 D KEGG: ami:Amir_2133 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 713693..714601 Pseudonocardia dioxanivorans CB1190 10362473 YP_004330771.1 CDS Psed_0655 NC_015312.1 714598 715257 D KEGG: ami:Amir_2134 hypothetical protein; hypothetical protein 714598..715257 Pseudonocardia dioxanivorans CB1190 10362474 YP_004330772.1 CDS Psed_0656 NC_015312.1 715264 715956 R KEGG: amd:AMED_6611 hypothetical protein; hypothetical protein complement(715264..715956) Pseudonocardia dioxanivorans CB1190 10362475 YP_004330773.1 CDS Psed_0657 NC_015312.1 715956 716936 R PFAM: Protein of unknown function DUF318, transmembrane; KEGG: sen:SACE_1496 permease; hypothetical protein complement(715956..716936) Pseudonocardia dioxanivorans CB1190 10362476 YP_004330774.1 CDS Psed_0658 NC_015312.1 717009 717569 R KEGG: tfu:Tfu_1924 hypothetical protein; hypothetical protein complement(717009..717569) Pseudonocardia dioxanivorans CB1190 10362477 YP_004330775.1 CDS Psed_0659 NC_015312.1 717624 718196 D KEGG: sro:Sros_0898 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; ECF subfamily RNA polymerase sigma-24 subunit 717624..718196 Pseudonocardia dioxanivorans CB1190 10362478 YP_004330776.1 CDS Psed_0660 NC_015312.1 718193 718843 D PFAM: Anti-sigma K factor RskA; KEGG: ace:Acel_0058 transmembrane anti-sigma factor; anti-sigma-K factor RskA 718193..718843 Pseudonocardia dioxanivorans CB1190 10362479 YP_004330777.1 CDS Psed_0661 NC_015312.1 718920 720032 R KEGG: nfa:nfa11970 dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES complement(718920..720032) Pseudonocardia dioxanivorans CB1190 10362480 YP_004330778.1 CDS Psed_0662 NC_015312.1 720220 720876 D KEGG: nml:Namu_4774 hypothetical protein; hypothetical protein 720220..720876 Pseudonocardia dioxanivorans CB1190 10362481 YP_004330779.1 CDS Psed_0663 NC_015312.1 720922 722262 R PFAM: General substrate transporter; KEGG: rxy:Rxyl_1587 major facilitator transporter; general substrate transporter complement(720922..722262) Pseudonocardia dioxanivorans CB1190 10362482 YP_004330780.1 CDS Psed_0664 NC_015312.1 722259 723266 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: atu:Atu1400 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(722259..723266) Pseudonocardia dioxanivorans CB1190 10362483 YP_004330781.1 CDS Psed_0665 NC_015312.1 723263 724405 R KEGG: bmj:BMULJ_05466 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase complement(723263..724405) Pseudonocardia dioxanivorans CB1190 10362484 YP_004330782.1 CDS Psed_0666 NC_015312.1 724402 725598 R PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: mlo:mll7085 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; galactonate dehydratase complement(724402..725598) Pseudonocardia dioxanivorans CB1190 10362485 YP_004330783.1 CDS Psed_0667 NC_015312.1 725719 726609 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: smd:Smed_6318 LysR family transcriptional regulator; LysR family transcriptional regulator 725719..726609 Pseudonocardia dioxanivorans CB1190 10362486 YP_004330784.1 CDS Psed_0668 NC_015312.1 726672 726956 R KEGG: nml:Namu_3919 hypothetical protein; hypothetical protein complement(726672..726956) Pseudonocardia dioxanivorans CB1190 10362487 YP_004330785.1 CDS Psed_0669 NC_015312.1 727053 728003 R PFAM: Drug/metabolite transporter; KEGG: nml:Namu_5292 hypothetical protein; hypothetical protein complement(727053..728003) Pseudonocardia dioxanivorans CB1190 10362488 YP_004330786.1 CDS Psed_0670 NC_015312.1 728000 728986 R PFAM: Drug/metabolite transporter; KEGG: rer:RER_47080 hypothetical protein; hypothetical protein complement(728000..728986) Pseudonocardia dioxanivorans CB1190 10362489 YP_004330787.1 CDS Psed_0671 NC_015312.1 729144 729581 R PFAM: Uncharacterised protein family UPF0066; KEGG: amd:AMED_7744 hypothetical protein; hypothetical protein complement(729144..729581) Pseudonocardia dioxanivorans CB1190 10362490 YP_004330788.1 CDS Psed_0672 NC_015312.1 729660 730064 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH02714 glyoxalase/bleomycin resistance-like protein; glyoxalase/bleomycin resistance protein/dioxygenase 729660..730064 Pseudonocardia dioxanivorans CB1190 10362491 YP_004330789.1 CDS Psed_0673 NC_015312.1 730133 730327 D hypothetical protein 730133..730327 Pseudonocardia dioxanivorans CB1190 10362492 YP_004330790.1 CDS Psed_0674 NC_015312.1 730600 731610 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; KEGG: azo:azo2612 GAF/GGDEF-domain-containing protein; SMART: Diguanylate cyclase, predicted; GAF; GAF sensor-containing diguanylate cyclase 730600..731610 Pseudonocardia dioxanivorans CB1190 10362493 YP_004330791.1 CDS Psed_0675 NC_015312.1 731618 732343 R PFAM: Helix-turn-helix, HxlR type; KEGG: nfa:nfa24980 transcriptional regulator; HxlR family transcriptional regulator complement(731618..732343) Pseudonocardia dioxanivorans CB1190 10362494 YP_004330792.1 CDS Psed_0676 NC_015312.1 732415 733533 D PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: pzu:PHZ_c3106 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 732415..733533 Pseudonocardia dioxanivorans CB1190 10362495 YP_004330793.1 CDS Psed_0677 NC_015312.1 733538 734071 R PFAM: Protein of unknown function DUF664; KEGG: kfl:Kfla_2986 protein of unknown function DUF664; hypothetical protein complement(733538..734071) Pseudonocardia dioxanivorans CB1190 10362496 YP_004330794.1 CDS Psed_0678 NC_015312.1 734206 734385 R KEGG: mav:MAV_0775 zinc transporter Slc39a7; zinc transporter Slc39a7 complement(734206..734385) Pseudonocardia dioxanivorans CB1190 10362497 YP_004330795.1 CDS Psed_0679 NC_015312.1 734633 735484 D KEGG: mau:Micau_2627 hypothetical protein; hypothetical protein 734633..735484 Pseudonocardia dioxanivorans CB1190 10362498 YP_004330796.1 CDS Psed_0680 NC_015312.1 735528 735968 R PFAM: Helix-turn-helix, HxlR type; KEGG: rha:RHA1_ro01404 hypothetical protein; HxlR family transcriptional regulator complement(735528..735968) Pseudonocardia dioxanivorans CB1190 10362499 YP_004330797.1 CDS Psed_0681 NC_015312.1 736079 736624 D KEGG: fal:FRAAL2803 hypothetical protein; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; carbonic anhydrase 736079..736624 Pseudonocardia dioxanivorans CB1190 10362500 YP_004330798.1 CDS Psed_0682 NC_015312.1 736814 737833 D PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease 736814..737833 Pseudonocardia dioxanivorans CB1190 10362501 YP_004330799.1 CDS Psed_0683 NC_015312.1 737907 739085 D KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein 737907..739085 Pseudonocardia dioxanivorans CB1190 10362502 YP_004330800.1 CDS Psed_0684 NC_015312.1 739111 739893 D KEGG: amd:AMED_0066 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 739111..739893 Pseudonocardia dioxanivorans CB1190 10362503 YP_004330801.1 CDS Psed_0685 NC_015312.1 739890 741401 D PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_5697 ABC transporter related protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 739890..741401 Pseudonocardia dioxanivorans CB1190 10362504 YP_004330802.1 CDS Psed_0686 NC_015312.1 741488 742924 D KEGG: ctc:CTC01781 phenylhydantoinase; PFAM: Amidohydrolase 1; dihydropyrimidinase 741488..742924 Pseudonocardia dioxanivorans CB1190 10362505 YP_004330803.1 CDS Psed_0687 NC_015312.1 742924 743931 D PFAM: Asparaginase/glutaminase; KEGG: rxy:Rxyl_2741 asparaginase; SMART: Asparaginase/glutaminase; asparaginase 742924..743931 Pseudonocardia dioxanivorans CB1190 10362506 YP_004330804.1 CDS Psed_0688 NC_015312.1 743956 745095 D KEGG: mil:ML5_3221 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 743956..745095 Pseudonocardia dioxanivorans CB1190 10362507 YP_004330805.1 CDS Psed_0689 NC_015312.1 745239 746456 R PFAM: Major facilitator superfamily MFS-1; KEGG: msm:MSMEG_2810 major facilitator superfamily protein; major facilitator superfamily protein complement(745239..746456) Pseudonocardia dioxanivorans CB1190 10362508 YP_004330806.1 CDS Psed_0690 NC_015312.1 746662 747954 D PFAM: Peptidase M23; KEGG: scb:SCAB_47131 peptidase; peptidase M23 746662..747954 Pseudonocardia dioxanivorans CB1190 10362509 YP_004330807.1 CDS Psed_0691 NC_015312.1 748004 748543 D PFAM: Protein of unknown function DUF1707; KEGG: mtb:TBMG_01108 hypothetical protein; hypothetical protein 748004..748543 Pseudonocardia dioxanivorans CB1190 10362510 YP_004330808.1 CDS Psed_0692 NC_015312.1 748530 748850 R hypothetical protein complement(748530..748850) Pseudonocardia dioxanivorans CB1190 10362511 YP_004330809.1 CDS Psed_0693 NC_015312.1 749058 749357 R hypothetical protein complement(749058..749357) Pseudonocardia dioxanivorans CB1190 10362512 YP_004330810.1 CDS Psed_0694 NC_015312.1 749712 750629 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msm:MSMEG_1985 transcriptional regulator, LysR family protein; LysR family transcriptional regulator complement(749712..750629) Pseudonocardia dioxanivorans CB1190 10362513 YP_004330811.1 CDS Psed_0695 NC_015312.1 750746 751816 D TIGRFAM: Tartrate dehydrogenase; KEGG: msm:MSMEG_1986 tartrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 750746..751816 Pseudonocardia dioxanivorans CB1190 10362514 YP_004330812.1 CDS Psed_0696 NC_015312.1 751953 752234 D KEGG: vcn:VOLCADRAFT_89522 hypothetical protein; hypothetical protein 751953..752234 Pseudonocardia dioxanivorans CB1190 10362515 YP_004330813.1 CDS Psed_0697 NC_015312.1 752429 753136 D KEGG: pmx:PERMA_1659 flavin reductase domain protein, FMN-binding; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 752429..753136 Pseudonocardia dioxanivorans CB1190 10362516 YP_004330814.1 CDS Psed_0698 NC_015312.1 753268 753675 D PFAM: YCII-related; KEGG: cai:Caci_4747 YCII-related protein; hypothetical protein 753268..753675 Pseudonocardia dioxanivorans CB1190 10362517 YP_004330815.1 CDS Psed_0699 NC_015312.1 753672 754823 D KEGG: cai:Caci_4746 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 753672..754823 Pseudonocardia dioxanivorans CB1190 10362518 YP_004330816.1 CDS Psed_0700 NC_015312.1 754863 757109 D KEGG: rxy:Rxyl_2946 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 754863..757109 Pseudonocardia dioxanivorans CB1190 10362519 YP_004330817.1 CDS Psed_0701 NC_015312.1 757166 758722 D manually curated; KEGG: amd:AMED_5441 FAD-dependent oxidoreductase; PFAM: Monooxygenase, FAD-binding; 2,4-dichlorophenol 6-monooxygenase 757166..758722 Pseudonocardia dioxanivorans CB1190 10362520 YP_004330818.1 CDS Psed_0702 NC_015312.1 758828 759850 R PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: scb:SCAB_61641 adenosine/AMP deaminase; adenosine deaminase complement(758828..759850) Pseudonocardia dioxanivorans CB1190 10362521 YP_004330819.1 CDS Psed_0703 NC_015312.1 759943 762012 R PFAM: Membrane transport protein, MMPL type; KEGG: svi:Svir_37330 predicted RND superfamily drug exporter; MMPL domain-containing protein complement(759943..762012) Pseudonocardia dioxanivorans CB1190 10362522 YP_004330820.1 CDS Psed_0704 NC_015312.1 762251 763510 R KEGG: mil:ML5_0800 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; SMART: Protein phosphatase 2C-like; GAF sensor-containing protein serine/threonine phosphatase complement(762251..763510) Pseudonocardia dioxanivorans CB1190 10362523 YP_004330821.1 CDS Psed_0705 NC_015312.1 763668 764552 D PFAM: UspA; KEGG: req:REQ_23940 universal stress family protein; UspA domain-containing protein 763668..764552 Pseudonocardia dioxanivorans CB1190 10362524 YP_004330822.1 CDS Psed_0706 NC_015312.1 764549 764902 D KEGG: gob:Gobs_1336 hypothetical protein; hypothetical protein 764549..764902 Pseudonocardia dioxanivorans CB1190 10362525 YP_004330823.1 CDS Psed_0707 NC_015312.1 765030 765959 D PFAM: UspA; KEGG: cef:CE2791 hypothetical protein; UspA domain-containing protein 765030..765959 Pseudonocardia dioxanivorans CB1190 10362526 YP_004330824.1 CDS Psed_0708 NC_015312.1 766129 766743 D KEGG: sen:SACE_2402 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing membrane protein 766129..766743 Pseudonocardia dioxanivorans CB1190 10362527 YP_004330825.1 CDS Psed_0709 NC_015312.1 766856 767707 R PFAM: UspA; KEGG: sro:Sros_5439 universal stress protein UspA and related nucleotide-binding protein-like protein; UspA domain-containing protein complement(766856..767707) Pseudonocardia dioxanivorans CB1190 10362528 YP_004330826.1 CDS Psed_0710 NC_015312.1 767925 768470 R PFAM: Flavodoxin/nitric oxide synthase; KEGG: fra:Francci3_1002 hypothetical protein; flavodoxin/nitric oxide synthase complement(767925..768470) Pseudonocardia dioxanivorans CB1190 10362529 YP_004330827.1 CDS Psed_0711 NC_015312.1 768750 769343 D KEGG: sma:SAV_1301 hypothetical protein; hypothetical protein 768750..769343 Pseudonocardia dioxanivorans CB1190 10362530 YP_004330828.1 CDS Psed_0712 NC_015312.1 769352 770329 R KEGG: ami:Amir_1917 nitroreductase; nitroreductase complement(769352..770329) Pseudonocardia dioxanivorans CB1190 10362531 YP_004330829.1 CDS Psed_0713 NC_015312.1 770386 771294 R PFAM: UspA; KEGG: amd:AMED_5483 universal stress protein; UspA domain-containing protein complement(770386..771294) Pseudonocardia dioxanivorans CB1190 10362532 YP_004330830.1 CDS Psed_0714 NC_015312.1 771417 772415 R KEGG: ami:Amir_1906 nitroreductase; nitroreductase complement(771417..772415) Pseudonocardia dioxanivorans CB1190 10362533 YP_004330831.1 CDS Psed_0715 NC_015312.1 772589 774232 D KEGG: ami:Amir_1907 GAF sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; GAF; SMART: GAF; ATPase-like, ATP-binding domain; GAF sensor signal transduction histidine kinase 772589..774232 Pseudonocardia dioxanivorans CB1190 10362534 YP_004330832.1 CDS Psed_0716 NC_015312.1 774295 775209 D PFAM: UspA; KEGG: sen:SACE_2425 universal stress protein; UspA domain-containing protein 774295..775209 Pseudonocardia dioxanivorans CB1190 10362535 YP_004330833.1 CDS Psed_0717 NC_015312.1 775206 776051 D PFAM: UspA; KEGG: sro:Sros_3526 hypothetical protein; UspA domain-containing protein 775206..776051 Pseudonocardia dioxanivorans CB1190 10362536 YP_004330834.1 CDS Psed_0718 NC_015312.1 776089 776733 R KEGG: ami:Amir_6098 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(776089..776733) Pseudonocardia dioxanivorans CB1190 10362537 YP_004330835.1 CDS Psed_0719 NC_015312.1 776882 777475 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fri:FraEuI1c_4013 regulatory protein TetR; TetR family transcriptional regulator 776882..777475 Pseudonocardia dioxanivorans CB1190 10362538 YP_004330836.1 CDS Psed_0720 NC_015312.1 777475 778146 D TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: fri:FraEuI1c_4014 protein of unknown function DUF1503; hypothetical protein 777475..778146 Pseudonocardia dioxanivorans CB1190 10362539 YP_004330837.1 CDS Psed_0721 NC_015312.1 778280 778642 R KEGG: sen:SACE_6553 hypothetical protein; hypothetical protein complement(778280..778642) Pseudonocardia dioxanivorans CB1190 10362540 YP_004330838.1 CDS Psed_0723 NC_015312.1 778924 779901 R PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: amd:AMED_1631 purine nucleosidase; inosine/uridine-preferring nucleoside hydrolase complement(778924..779901) Pseudonocardia dioxanivorans CB1190 10362542 YP_004330839.1 CDS Psed_0725 NC_015312.1 780600 781535 R KEGG: rop:ROP_47630 acid phosphatase; acid phosphatase complement(780600..781535) Pseudonocardia dioxanivorans CB1190 10362544 YP_004330840.1 CDS Psed_0726 NC_015312.1 781620 782528 R KEGG: svi:Svir_26230 hypothetical protein; manually curated; PFAM: Sulphatase-modifying factor; sulfatase-modifying factor protein complement(781620..782528) Pseudonocardia dioxanivorans CB1190 10362545 YP_004330841.1 CDS Psed_0727 NC_015312.1 782789 785164 D PFAM: Sulfatase; KEGG: rop:ROP_36660 arylsulfatase; sulfatase 782789..785164 Pseudonocardia dioxanivorans CB1190 10362546 YP_004330842.1 CDS Psed_0728 NC_015312.1 785232 786122 R KEGG: gob:Gobs_3031 diacylglycerol kinase catalytic subunit; PFAM: Diacylglycerol kinase, catalytic domain; SMART: Diacylglycerol kinase, catalytic domain; diacylglycerol kinase catalytic subunit complement(785232..786122) Pseudonocardia dioxanivorans CB1190 10362547 YP_004330843.1 CDS Psed_0729 NC_015312.1 786353 787663 D KEGG: xau:Xaut_2680 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; acyl-CoA dehydrogenase 786353..787663 Pseudonocardia dioxanivorans CB1190 10362548 YP_004330844.1 CDS Psed_0730 NC_015312.1 787749 788195 D KEGG: pla:Plav_2689 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 787749..788195 Pseudonocardia dioxanivorans CB1190 10362549 YP_004330845.1 CDS Psed_0731 NC_015312.1 788247 789575 D KEGG: xau:Xaut_2682 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; acyl-CoA dehydrogenase 788247..789575 Pseudonocardia dioxanivorans CB1190 10362550 YP_004330846.1 CDS Psed_0732 NC_015312.1 789869 791260 D KEGG: msm:MSMEG_3730 helix-turn-helix, fis-type, PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; LytTr DNA-binding protein 789869..791260 Pseudonocardia dioxanivorans CB1190 10362551 YP_004330847.1 CDS Psed_0733 NC_015312.1 791493 793688 D PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: fre:Franean1_1533 catalase/peroxidase HPI; catalase-peroxidase 791493..793688 Pseudonocardia dioxanivorans CB1190 10362552 YP_004330848.1 CDS Psed_0734 NC_015312.1 793895 794356 D PFAM: Multicopper oxidase, type 3; KEGG: msm:MSMEG_3727 hypothetical protein; multicopper oxidase type 3 793895..794356 Pseudonocardia dioxanivorans CB1190 10362553 YP_004330849.1 CDS Psed_0735 NC_015312.1 794371 796059 D SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG: sen:SACE_4449 quinoprotein ethanol dehydrogenase precursor; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; PQQ-dependent dehydrogenase 794371..796059 Pseudonocardia dioxanivorans CB1190 10362554 YP_004330850.1 CDS Psed_0736 NC_015312.1 796095 796193 D TIGRFAM: Coenzyme PQQ biosynthesis protein A; PFAM: Coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 796095..796193 Pseudonocardia dioxanivorans CB1190 10362555 YP_004330851.1 CDS Psed_0737 NC_015312.1 796256 797149 D TIGRFAM: Coenzyme PQQ biosynthesis protein B; KEGG: gob:Gobs_2453 pyrroloquinoline quinone biosynthesis protein PqqB; coenzyme PQQ biosynthesis protein B 796256..797149 Pseudonocardia dioxanivorans CB1190 10362556 YP_004330852.1 CDS Psed_0738 NC_015312.1 797157 797855 D TIGRFAM: Coenzyme PQQ biosynthesis protein C; KEGG: sen:SACE_4446 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; coenzyme PQQ biosynthesis protein C 797157..797855 Pseudonocardia dioxanivorans CB1190 10362557 YP_004330853.1 CDS Psed_0739 NC_015312.1 797861 798139 D TIGRFAM: Coenzyme PQQ synthesis D, bacteria; KEGG: msm:MSMEG_3722 bifunctional coenzyme PQQ synthesis protein C/D; coenzyme PQQ biosynthesis protein PqqD 797861..798139 Pseudonocardia dioxanivorans CB1190 10362558 YP_004330854.1 CDS Psed_0740 NC_015312.1 798136 799221 D TIGRFAM: Coenzyme PQQ biosynthesis protein E, bacteria; PFAM: Radical SAM; KEGG: gob:Gobs_2456 coenzyme PQQ biosynthesis protein E; SMART: Elongator protein 3/MiaB/NifB; coenzyme PQQ biosynthesis protein E 798136..799221 Pseudonocardia dioxanivorans CB1190 10362559 YP_004330855.1 CDS Psed_0741 NC_015312.1 799218 799781 D PFAM: Domain of unknown function DUF204; KEGG: btk:BT9727_5008 integral membrane protein; hypothetical protein 799218..799781 Pseudonocardia dioxanivorans CB1190 10362560 YP_004330856.1 CDS Psed_0742 NC_015312.1 799799 800068 R KEGG: nml:Namu_1619 ferredoxin; hypothetical protein complement(799799..800068) Pseudonocardia dioxanivorans CB1190 10362561 YP_004330857.1 CDS Psed_0743 NC_015312.1 800065 801339 R PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: amd:AMED_5939 respiratory-chain NADH dehydrogenase-related protein; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) complement(800065..801339) Pseudonocardia dioxanivorans CB1190 10362562 YP_004330858.1 CDS Psed_0744 NC_015312.1 801336 801878 R PFAM: Flavoprotein transmembrane component; KEGG: amd:AMED_5940 hypothetical protein; ferric reductase complement(801336..801878) Pseudonocardia dioxanivorans CB1190 10362563 YP_004330859.1 CDS Psed_0745 NC_015312.1 801878 802810 R PFAM: Thiamine synthesis ApbE/UPF0280; KEGG: ami:Amir_1182 ApbE family lipoprotein; ApbE family lipoprotein complement(801878..802810) Pseudonocardia dioxanivorans CB1190 10362564 YP_004330860.1 CDS Psed_0746 NC_015312.1 802807 803190 R hypothetical protein complement(802807..803190) Pseudonocardia dioxanivorans CB1190 10362565 YP_004330861.1 CDS Psed_0747 NC_015312.1 803236 804060 D KEGG: nml:Namu_0038 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 803236..804060 Pseudonocardia dioxanivorans CB1190 10362566 YP_004330862.1 CDS Psed_0748 NC_015312.1 804057 805286 D KEGG: ami:Amir_4352 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 804057..805286 Pseudonocardia dioxanivorans CB1190 10362567 YP_004330863.1 CDS Psed_0749 NC_015312.1 805356 805910 D KEGG: nca:Noca_4421 hypothetical protein; hypothetical protein 805356..805910 Pseudonocardia dioxanivorans CB1190 10362568 YP_004330864.1 CDS Psed_0750 NC_015312.1 806083 806418 R hypothetical protein complement(806083..806418) Pseudonocardia dioxanivorans CB1190 10362569 YP_004330865.1 CDS Psed_0753 NC_015312.1 807862 808398 D KEGG: saq:Sare_1642 hypothetical protein; hypothetical protein 807862..808398 Pseudonocardia dioxanivorans CB1190 10362572 YP_004330866.1 CDS Psed_0754 NC_015312.1 808666 808992 D KEGG: scb:SCAB_11001 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 808666..808992 Pseudonocardia dioxanivorans CB1190 10362573 YP_004330867.1 CDS Psed_0755 NC_015312.1 809018 809503 D PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: nml:Namu_2984 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 809018..809503 Pseudonocardia dioxanivorans CB1190 10362574 YP_004330868.1 CDS Psed_0756 NC_015312.1 809517 811532 D KEGG: nml:Namu_2985 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 809517..811532 Pseudonocardia dioxanivorans CB1190 10362575 YP_004330869.1 CDS Psed_0757 NC_015312.1 811529 812476 D KEGG: nml:Namu_2986 respiratory-chain NADH dehydrogenase subunit 1; respiratory-chain NADH dehydrogenase subunit 1 811529..812476 Pseudonocardia dioxanivorans CB1190 10362576 YP_004330870.1 CDS Psed_0758 NC_015312.1 812508 813185 D KEGG: nml:Namu_2987 hypothetical protein; hypothetical protein 812508..813185 Pseudonocardia dioxanivorans CB1190 10362577 YP_004330871.1 CDS Psed_0759 NC_015312.1 813182 814684 D KEGG: nml:Namu_2988 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 813182..814684 Pseudonocardia dioxanivorans CB1190 10362578 YP_004330872.1 CDS Psed_0760 NC_015312.1 814681 816195 D PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; Nickel-dependent hydrogenase, large subunit; KEGG: nml:Namu_2989 NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 814681..816195 Pseudonocardia dioxanivorans CB1190 10362579 YP_004330873.1 CDS Psed_0761 NC_015312.1 816327 816719 D KEGG: sen:SACE_3300 hypothetical protein; hypothetical protein 816327..816719 Pseudonocardia dioxanivorans CB1190 10362580 YP_004330874.1 CDS Psed_0762 NC_015312.1 816862 816972 D hypothetical protein 816862..816972 Pseudonocardia dioxanivorans CB1190 10362581 YP_004330875.1 CDS Psed_0763 NC_015312.1 817005 817280 R TIGRFAM: Muconolactone delta-isomerase; KEGG: rer:RER_54210 muconolactone isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase complement(817005..817280) Pseudonocardia dioxanivorans CB1190 10362582 YP_004330876.1 CDS Psed_0764 NC_015312.1 817382 818230 R TIGRFAM: Catechol 1,2-dioxygenase, actinobacteria; KEGG: rer:RER_54230 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; catechol 1,2-dioxygenase complement(817382..818230) Pseudonocardia dioxanivorans CB1190 10362583 YP_004330877.1 CDS Psed_0765 NC_015312.1 818269 819372 R PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: gob:Gobs_1295 mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Muconate cycloisomerase complement(818269..819372) Pseudonocardia dioxanivorans CB1190 10362584 YP_004330878.1 CDS Psed_0766 NC_015312.1 819398 820450 R KEGG: tcu:Tcur_0530 oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; phenol 2-monooxygenase complement(819398..820450) Pseudonocardia dioxanivorans CB1190 10362585 YP_004330879.1 CDS Psed_0767 NC_015312.1 820460 820780 R PFAM: Phenol hydroxylase,conserved region; KEGG: tcu:Tcur_0527 phenol hydroxylase subunit P4; phenol hydroxylase conserved region complement(820460..820780) Pseudonocardia dioxanivorans CB1190 10362586 YP_004330880.1 CDS Psed_0768 NC_015312.1 820783 822312 R KEGG: tcu:Tcur_0526 methane/phenol/toluene hydroxylase; PFAM: Methane/phenol/toluene hydroxylase; YHS; phenol 2-monooxygenase complement(820783..822312) Pseudonocardia dioxanivorans CB1190 10362587 YP_004330881.1 CDS Psed_0769 NC_015312.1 822314 822598 R PFAM: Monooxygenase component MmoB/DmpM; KEGG: tcu:Tcur_0525 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM complement(822314..822598) Pseudonocardia dioxanivorans CB1190 10362588 YP_004330882.1 CDS Psed_0770 NC_015312.1 822595 823542 R KEGG: tcu:Tcur_0524 phenol 2-monooxygenase; PFAM: Methane/phenol/toluene hydroxylase; phenol 2-monooxygenase complement(822595..823542) Pseudonocardia dioxanivorans CB1190 10362589 YP_004330883.1 CDS Psed_0771 NC_015312.1 823596 823985 R KEGG: tcu:Tcur_0523 hypothetical protein; hypothetical protein complement(823596..823985) Pseudonocardia dioxanivorans CB1190 10362590 YP_004330884.1 CDS Psed_0772 NC_015312.1 824145 825059 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msm:MSMEG_1895 HTH-type transcriptional regulator AlsR; LysR family transcriptional regulator complement(824145..825059) Pseudonocardia dioxanivorans CB1190 10362591 YP_004330885.1 CDS Psed_0773 NC_015312.1 825143 825601 R KEGG: rop:ROP_04230 carboxymuconolactone decarboxylase protein; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase complement(825143..825601) Pseudonocardia dioxanivorans CB1190 10362592 YP_004330886.1 CDS Psed_0774 NC_015312.1 825668 826558 R KEGG: tcu:Tcur_3211 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(825668..826558) Pseudonocardia dioxanivorans CB1190 10362593 YP_004330887.1 CDS Psed_0777 NC_015312.1 827742 828407 R SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: scb:SCAB_6611 3-oxoadipate CoA-transferase subunit; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(827742..828407) Pseudonocardia dioxanivorans CB1190 10362596 YP_004330888.1 CDS Psed_0778 NC_015312.1 828404 829081 R SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: scb:SCAB_6621 3-oxoadipate CoA-transferase subunit A; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(828404..829081) Pseudonocardia dioxanivorans CB1190 10362597 YP_004330889.1 CDS Psed_0779 NC_015312.1 829078 830295 R TIGRFAM: Thiolase; KEGG: nca:Noca_1013 acetyl-CoA acetyltransferases; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase complement(829078..830295) Pseudonocardia dioxanivorans CB1190 10362598 YP_004330890.1 CDS Psed_0780 NC_015312.1 830352 831260 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nca:Noca_1012 LysR family transcriptional regulator; LysR family transcriptional regulator 830352..831260 Pseudonocardia dioxanivorans CB1190 10362599 YP_004330891.1 CDS Psed_0781 NC_015312.1 831539 833197 R KEGG: mmi:MMAR_5294 PE-PGRS family protein; PE-PGRS family protein complement(831539..833197) Pseudonocardia dioxanivorans CB1190 10362601 YP_004330892.1 CDS Psed_0782 NC_015312.1 833372 834028 R PFAM: Methyltransferase type 11; KEGG: sen:SACE_4341 methyltransferase; type 11 methyltransferase complement(833372..834028) Pseudonocardia dioxanivorans CB1190 10362602 YP_004330893.1 CDS Psed_0783 NC_015312.1 834042 835196 R PFAM: Metallo-dependent phosphatase; KEGG: msp:Mspyr1_42840 phosphohydrolase; metallophosphoesterase complement(834042..835196) Pseudonocardia dioxanivorans CB1190 10362603 YP_004330894.1 CDS Psed_0784 NC_015312.1 835263 836156 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: sco:SCO0907 dehydrogenase; 6-phosphogluconate dehydrogenase 835263..836156 Pseudonocardia dioxanivorans CB1190 10362604 YP_004330895.1 CDS Psed_0785 NC_015312.1 836208 836909 D KEGG: sen:SACE_0761 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 836208..836909 Pseudonocardia dioxanivorans CB1190 10362605 YP_004330896.1 CDS Psed_0786 NC_015312.1 836906 838369 D KEGG: sen:SACE_0762 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 836906..838369 Pseudonocardia dioxanivorans CB1190 10362606 YP_004330897.1 CDS Psed_0787 NC_015312.1 838476 840359 D KEGG: sen:SACE_0765 serine protease, C-terminal; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 838476..840359 Pseudonocardia dioxanivorans CB1190 10362607 YP_004330898.1 CDS Psed_0788 NC_015312.1 840356 840937 D TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: sen:SACE_0766 molybdenum cofactor biosynthesis protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 840356..840937 Pseudonocardia dioxanivorans CB1190 10362608 YP_004330899.1 CDS Psed_0789 NC_015312.1 841110 842120 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: mab:MAB_1874 oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(841110..842120) Pseudonocardia dioxanivorans CB1190 10362609 YP_004330900.1 CDS Psed_0790 NC_015312.1 842825 843460 R KEGG: kfl:Kfla_0038 hypothetical protein; hypothetical protein complement(842825..843460) Pseudonocardia dioxanivorans CB1190 10362610 YP_004330901.1 CDS Psed_0791 NC_015312.1 843579 843743 D KEGG: amd:AMED_8316 hypothetical protein; hypothetical protein 843579..843743 Pseudonocardia dioxanivorans CB1190 10362611 YP_004330902.1 CDS Psed_0792 NC_015312.1 844245 845150 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: amd:AMED_1937 LysR family transcriptional regulator; LysR family transcriptional regulator complement(844245..845150) Pseudonocardia dioxanivorans CB1190 10362612 YP_004330903.1 CDS Psed_0793 NC_015312.1 845221 846087 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_1936 carbonyl reductase; short-chain dehydrogenase/reductase SDR 845221..846087 Pseudonocardia dioxanivorans CB1190 10362613 YP_004330904.1 CDS Psed_0794 NC_015312.1 846094 846522 R KEGG: amd:AMED_8315 large conductance mechanosensitive channel, MscL family; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein complement(846094..846522) Pseudonocardia dioxanivorans CB1190 10362614 YP_004330905.1 CDS Psed_0795 NC_015312.1 846540 847214 R KEGG: rop:ROP_56940 hypothetical protein; PFAM: SAF domain; SMART: SAF domain; SAF domain-containing protein complement(846540..847214) Pseudonocardia dioxanivorans CB1190 10362615 YP_004330906.1 CDS Psed_0796 NC_015312.1 847325 847684 R TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: mil:ML5_0952 regulatory protein, fmdb family; SMART: Regulatory protein, FmdB; FmdB family regulatory protein complement(847325..847684) Pseudonocardia dioxanivorans CB1190 10362616 YP_004330907.1 CDS Psed_0797 NC_015312.1 847764 848366 R KEGG: svi:Svir_32680 5,10-methenyltetrahydrofolate synthetase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(847764..848366) Pseudonocardia dioxanivorans CB1190 10362617 YP_004330908.1 CDS Psed_0798 NC_015312.1 848403 849299 D KEGG: ami:Amir_0628 nucleotidyl transferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 848403..849299 Pseudonocardia dioxanivorans CB1190 10362618 YP_004330909.1 CDS Psed_0799 NC_015312.1 849306 850532 D TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; KEGG: ami:Amir_0629 molybdenum cofactor synthesis domain protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 849306..850532 Pseudonocardia dioxanivorans CB1190 10362619 YP_004330910.1 CDS Psed_0800 NC_015312.1 850542 851210 D KEGG: amd:AMED_8309 ribosomal-protein-alanine N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; GCN5-like N-acetyltransferase 850542..851210 Pseudonocardia dioxanivorans CB1190 10362620 YP_004330911.1 CDS Psed_0801 NC_015312.1 851427 852635 D KEGG: amd:AMED_8308 hypothetical protein; hypothetical protein 851427..852635 Pseudonocardia dioxanivorans CB1190 10362621 YP_004330912.1 CDS Psed_0802 NC_015312.1 852653 854341 R KEGG: fra:Francci3_1684 resolvase-like protein; PFAM: Resolvase, N-terminal; Recombinase; SMART: Resolvase, N-terminal; resolvase domain-containing protein complement(852653..854341) Pseudonocardia dioxanivorans CB1190 10362622 YP_004330913.1 CDS Psed_0803 NC_015312.1 854527 854760 R hypothetical protein complement(854527..854760) Pseudonocardia dioxanivorans CB1190 10362624 YP_004330914.1 CDS Psed_0804 NC_015312.1 855372 856568 R KEGG: stp:Strop_1985 hypothetical protein; hypothetical protein complement(855372..856568) Pseudonocardia dioxanivorans CB1190 10362625 YP_004330915.1 CDS Psed_0806 NC_015312.1 857487 857720 D PFAM: Biotin/lipoyl attachment; KEGG: tbi:Tbis_1751 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 857487..857720 Pseudonocardia dioxanivorans CB1190 10362627 YP_004330916.1 CDS Psed_0807 NC_015312.1 857726 858697 R KEGG: ttr:Tter_1968 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(857726..858697) Pseudonocardia dioxanivorans CB1190 10362628 YP_004330917.1 CDS Psed_0808 NC_015312.1 858844 859134 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nca:Noca_1187 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(858844..859134) Pseudonocardia dioxanivorans CB1190 10362629 YP_004330918.1 CDS Psed_0809 NC_015312.1 859154 859915 R PFAM: Domain of unknown function DUF59; Ribosomal protein L22/L17; KEGG: svi:Svir_16180 predicted metal-sulfur cluster biosynthetic enzyme; hypothetical protein complement(859154..859915) Pseudonocardia dioxanivorans CB1190 10362630 YP_004330919.1 CDS Psed_0810 NC_015312.1 859943 861184 R KEGG: rxy:Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase complement(859943..861184) Pseudonocardia dioxanivorans CB1190 10362631 YP_004330920.1 CDS Psed_0811 NC_015312.1 861181 861507 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rme:Rmet_1314 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(861181..861507) Pseudonocardia dioxanivorans CB1190 10362632 YP_004330921.1 CDS Psed_0812 NC_015312.1 861507 862559 R PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0215 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase complement(861507..862559) Pseudonocardia dioxanivorans CB1190 10362633 YP_004330922.1 CDS Psed_0813 NC_015312.1 862556 862873 R PFAM: Monooxygenase component MmoB/DmpM; KEGG: bbt:BBta_1595 toluene-4-monooxygenase system protein D; monooxygenase component MmoB/DmpM complement(862556..862873) Pseudonocardia dioxanivorans CB1190 10362634 YP_004330923.1 CDS Psed_0814 NC_015312.1 862870 863178 R PFAM: Toluene-4-monooxygenase system B; KEGG: fra:Francci3_0212 toluene-4-monooxygenase system B; Toluene-4-monooxygenase system B complement(862870..863178) Pseudonocardia dioxanivorans CB1190 10362635 YP_004330924.1 CDS Psed_0815 NC_015312.1 863175 864707 R PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0211 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase complement(863175..864707) Pseudonocardia dioxanivorans CB1190 10362636 YP_004330925.1 CDS Psed_0816 NC_015312.1 864751 865227 R KEGG: reh:H16_B1338 hypothetical protein; hypothetical protein complement(864751..865227) Pseudonocardia dioxanivorans CB1190 10362637 YP_004330926.1 CDS Psed_0817 NC_015312.1 865236 865715 R PFAM: Protein of unknown function DUF1486; hypothetical protein complement(865236..865715) Pseudonocardia dioxanivorans CB1190 10362638 YP_004330927.1 CDS Psed_0818 NC_015312.1 865712 866731 R PFAM: ThiJ/PfpI; KEGG: nfi:NFIA_002150 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein complement(865712..866731) Pseudonocardia dioxanivorans CB1190 10362639 YP_004330928.1 CDS Psed_0819 NC_015312.1 866992 867717 D PFAM: ThiJ/PfpI; KEGG: rer:RER_57150 hypothetical protein; ThiJ/PfpI domain-containing protein 866992..867717 Pseudonocardia dioxanivorans CB1190 10362640 YP_004330929.1 CDS Psed_0820 NC_015312.1 867792 868745 R KEGG: pmy:Pmen_2638 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(867792..868745) Pseudonocardia dioxanivorans CB1190 10362641 YP_004330930.1 CDS Psed_0821 NC_015312.1 869989 871110 R SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: rer:RER_54220 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; muconate and chloromuconate cycloisomerase complement(869989..871110) Pseudonocardia dioxanivorans CB1190 10362642 YP_004330931.1 CDS Psed_0823 NC_015312.1 872013 872597 R PFAM: Alpha/beta hydrolase fold-1; KEGG: bur:Bcep18194_B1185 alpha/beta hydrolase; alpha/beta hydrolase complement(872013..872597) Pseudonocardia dioxanivorans CB1190 10362644 YP_004330932.1 CDS Psed_0824 NC_015312.1 873345 873902 D hypothetical protein 873345..873902 Pseudonocardia dioxanivorans CB1190 10362645 YP_004330933.1 CDS Psed_0825 NC_015312.1 874010 874975 D KEGG: rha:RHA1_ro04796 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 874010..874975 Pseudonocardia dioxanivorans CB1190 10362646 YP_004330934.1 CDS Psed_0826 NC_015312.1 874991 876574 R PFAM: Glycosyl transferase, family 39; KEGG: sen:SACE_0791 glycosyl transferase protein; glycosyl transferase protein complement(874991..876574) Pseudonocardia dioxanivorans CB1190 10362647 YP_004330935.1 CDS Psed_0827 NC_015312.1 876599 877447 D TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: nfa:nfa49120 methyltransferase; PFAM: Tetrapyrrole methylase; ribosomal RNA small subunit methyltransferase I 876599..877447 Pseudonocardia dioxanivorans CB1190 10362648 YP_004330936.1 CDS Psed_0828 NC_015312.1 877488 878792 R PFAM: Cation/H+ exchanger; KEGG: amd:AMED_6003 monovalent cation:H+ antiporter-2, CPA2 family; sodium/hydrogen exchanger complement(877488..878792) Pseudonocardia dioxanivorans CB1190 10362649 YP_004330937.1 CDS Psed_0829 NC_015312.1 878792 879274 R PFAM: Regulator of K+ conductance, C-terminal; KEGG: amd:AMED_6002 TrkA domain-containing protein; TrkA-C domain-containing protein complement(878792..879274) Pseudonocardia dioxanivorans CB1190 10362650 YP_004330938.1 CDS Psed_0830 NC_015312.1 879325 879930 R TIGRFAM: Chorismate mutase, periplasmic; PFAM: Chorismate mutase, type II; KEGG: sen:SACE_7067 chorismate mutase; SMART: Chorismate mutase; chorismate mutase complement(879325..879930) Pseudonocardia dioxanivorans CB1190 10362651 YP_004330939.1 CDS Psed_0831 NC_015312.1 879943 880932 R PFAM: O-methyltransferase, family 2; KEGG: sma:SAV_2382 O-methyltransferase; O-methyltransferase 2 complement(879943..880932) Pseudonocardia dioxanivorans CB1190 10362652 YP_004330940.1 CDS Psed_0832 NC_015312.1 881052 881771 D KEGG: saq:Sare_1382 LuxR family transcriptional regulator; LuxR family transcriptional regulator 881052..881771 Pseudonocardia dioxanivorans CB1190 10362653 YP_004330941.1 CDS Psed_0833 NC_015312.1 881866 883659 D PFAM: Aminoacyl-tRNA synthetase, class I (M); TIGRFAM: Methionyl-tRNA synthetase, class Ia; HAMAP: Methionyl-tRNA synthetase; KEGG: sen:SACE_0799 methionyl-tRNA synthetase; methionyl-tRNA synthetase 881866..883659 Pseudonocardia dioxanivorans CB1190 10362654 YP_004330942.1 CDS Psed_0834 NC_015312.1 883685 884587 D KEGG: sen:SACE_0800 deoxyribonuclease; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase 883685..884587 Pseudonocardia dioxanivorans CB1190 10362655 YP_004330943.1 CDS Psed_0835 NC_015312.1 884784 886937 D PFAM: Transglycosylase-like; G5; Domain of unknown function DUF348; KEGG: svi:Svir_32470 hypothetical protein; transglycosylase-like domain-containing protein 884784..886937 Pseudonocardia dioxanivorans CB1190 10362656 YP_004330944.1 CDS Psed_0836 NC_015312.1 886972 887826 D SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: sen:SACE_0802 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; ribosomal RNA small subunit methyltransferase A 886972..887826 Pseudonocardia dioxanivorans CB1190 10362657 YP_004330945.1 CDS Psed_0837 NC_015312.1 888194 888754 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: art:Arth_3006 PadR family transcriptional regulator; PadR family transcriptional regulator 888194..888754 Pseudonocardia dioxanivorans CB1190 10362658 YP_004330946.1 CDS Psed_0838 NC_015312.1 888730 890256 D KEGG: ach:Achl_2717 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 888730..890256 Pseudonocardia dioxanivorans CB1190 10362659 YP_004330947.1 CDS Psed_0839 NC_015312.1 890328 891299 D PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: amd:AMED_8246 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 890328..891299 Pseudonocardia dioxanivorans CB1190 10362660 YP_004330948.1 CDS Psed_0840 NC_015312.1 891299 893089 D KEGG: ami:Amir_0650 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 891299..893089 Pseudonocardia dioxanivorans CB1190 10362661 YP_004330949.1 CDS Psed_0841 NC_015312.1 893210 893575 D KEGG: rop:ROP_10760 hypothetical protein; hypothetical protein 893210..893575 Pseudonocardia dioxanivorans CB1190 10362662 YP_004330950.1 CDS Psed_0842 NC_015312.1 893750 894184 R manually curated; KEGG: fre:Franean1_2584 hypothetical protein; hypothetical protein complement(893750..894184) Pseudonocardia dioxanivorans CB1190 10362663 YP_004330951.1 CDS Psed_0843 NC_015312.1 894259 894816 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_2583 TetR family transcriptional regulator; TetR family transcriptional regulator 894259..894816 Pseudonocardia dioxanivorans CB1190 10362664 YP_004330952.1 CDS Psed_0844 NC_015312.1 894906 895886 D SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: tcu:Tcur_1684 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like; daunorubicin resistance ABC transporter ATPase subunit 894906..895886 Pseudonocardia dioxanivorans CB1190 10362665 YP_004330953.1 CDS Psed_0845 NC_015312.1 895883 896758 D PFAM: ABC-2 type transporter; KEGG: sen:SACE_0423 multidrug ABC transporter permease; ABC transporter 895883..896758 Pseudonocardia dioxanivorans CB1190 10362666 YP_004330954.1 CDS Psed_0846 NC_015312.1 896740 899961 R KEGG: cai:Caci_4666 transcriptional regulator, winged helix family; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator complement(896740..899961) Pseudonocardia dioxanivorans CB1190 10362667 YP_004330955.1 CDS Psed_0847 NC_015312.1 900086 901438 R KEGG: msp:Mspyr1_19610 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; beta-Ala-His dipeptidase complement(900086..901438) Pseudonocardia dioxanivorans CB1190 10362668 YP_004330956.1 CDS Psed_0848 NC_015312.1 901477 903147 D KEGG: ami:Amir_0652 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain fatty acid--ACP ligase 901477..903147 Pseudonocardia dioxanivorans CB1190 10362669 YP_004330957.1 CDS Psed_0849 NC_015312.1 903230 903811 R PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: req:REQ_12410 aminoacyl-tRNA hydrolase pth; peptidyl-tRNA hydrolase complement(903230..903811) Pseudonocardia dioxanivorans CB1190 10362670 YP_004330958.1 CDS Psed_0850 NC_015312.1 903817 904467 R TIGRFAM: Ribosomal protein L25, long-form; HAMAP: Ribosomal protein L25, long-form; KEGG: rop:ROP_57640 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25, short-form; 50S ribosomal protein L25 complement(903817..904467) Pseudonocardia dioxanivorans CB1190 10362671 YP_004330959.1 CDS Psed_0852 NC_015312.1 907472 907891 R hypothetical protein complement(907472..907891) Pseudonocardia dioxanivorans CB1190 10362673 YP_004330960.1 CDS Psed_0853 NC_015312.1 908425 908793 D hypothetical protein 908425..908793 Pseudonocardia dioxanivorans CB1190 10362674 YP_004330961.1 CDS Psed_0854 NC_015312.1 908790 908987 D hypothetical protein 908790..908987 Pseudonocardia dioxanivorans CB1190 10362675 YP_004330962.1 CDS Psed_0855 NC_015312.1 908975 909661 D KEGG: fre:Franean1_4241 hypothetical protein; hypothetical protein 908975..909661 Pseudonocardia dioxanivorans CB1190 10362676 YP_004330963.1 CDS Psed_0856 NC_015312.1 909658 911694 D PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fre:Franean1_1448 cell divisionFtsK/SpoIIIE; DNA translocase FtsK 909658..911694 Pseudonocardia dioxanivorans CB1190 10362677 YP_004330964.1 CDS Psed_0857 NC_015312.1 911767 911928 D hypothetical protein 911767..911928 Pseudonocardia dioxanivorans CB1190 10362678 YP_004330965.1 CDS Psed_0858 NC_015312.1 911940 912188 D hypothetical protein 911940..912188 Pseudonocardia dioxanivorans CB1190 10362679 YP_004330966.1 CDS Psed_0859 NC_015312.1 912190 912414 R hypothetical protein complement(912190..912414) Pseudonocardia dioxanivorans CB1190 10362680 YP_004330967.1 CDS Psed_0860 NC_015312.1 912527 916072 R KEGG: ote:Oter_1689 cell wall surface anchor family protein; hypothetical protein complement(912527..916072) Pseudonocardia dioxanivorans CB1190 10362681 YP_004330968.1 CDS Psed_0861 NC_015312.1 916077 916403 R hypothetical protein complement(916077..916403) Pseudonocardia dioxanivorans CB1190 10362682 YP_004330969.1 CDS Psed_0862 NC_015312.1 916558 916971 R hypothetical protein complement(916558..916971) Pseudonocardia dioxanivorans CB1190 10362683 YP_004330970.1 CDS Psed_0863 NC_015312.1 916971 917678 R hypothetical protein complement(916971..917678) Pseudonocardia dioxanivorans CB1190 10362684 YP_004330971.1 CDS Psed_0864 NC_015312.1 917685 918101 R hypothetical protein complement(917685..918101) Pseudonocardia dioxanivorans CB1190 10362685 YP_004330972.1 CDS Psed_0865 NC_015312.1 918904 920181 R PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type complement(918904..920181) Pseudonocardia dioxanivorans CB1190 10362686 YP_004330973.1 CDS Psed_0866 NC_015312.1 920178 920933 R manually curated; PFAM: IstB-like ATP-binding protein; KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(920178..920933) Pseudonocardia dioxanivorans CB1190 10362687 YP_004330974.1 CDS Psed_0867 NC_015312.1 921004 922629 R KEGG: rer:pREL1_0265 transposase; manually curated; PFAM: Integrase, catalytic core; integrase catalytic subunit complement(921004..922629) Pseudonocardia dioxanivorans CB1190 10362688 YP_004330975.1 CDS Psed_0868 NC_015312.1 923208 923516 R hypothetical protein complement(923208..923516) Pseudonocardia dioxanivorans CB1190 10362689 YP_004330976.1 CDS Psed_0869 NC_015312.1 923513 923836 R hypothetical protein complement(923513..923836) Pseudonocardia dioxanivorans CB1190 10362690 YP_004330977.1 CDS Psed_0870 NC_015312.1 923886 925340 R KEGG: mkm:Mkms_2962 hypothetical protein; hypothetical protein complement(923886..925340) Pseudonocardia dioxanivorans CB1190 10362691 YP_004330978.1 CDS Psed_0871 NC_015312.1 925337 925672 R hypothetical protein complement(925337..925672) Pseudonocardia dioxanivorans CB1190 10362692 YP_004330979.1 CDS Psed_0872 NC_015312.1 925890 926156 R PFAM: Prophage CP4-57 regulatory; KEGG: gob:Gobs_0015 regulatory protein MerR; prophage CP4-57 regulator complement(925890..926156) Pseudonocardia dioxanivorans CB1190 10362693 YP_004330980.1 CDS Psed_0873 NC_015312.1 926175 926834 D KEGG: msp:Mspyr1_12070 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 926175..926834 Pseudonocardia dioxanivorans CB1190 10362694 YP_004330981.1 CDS Psed_0874 NC_015312.1 926836 928029 D PFAM: Integrase, catalytic core, phage; KEGG: mau:Micau_5363 integrase protein; integrase protein 926836..928029 Pseudonocardia dioxanivorans CB1190 10362695 YP_004330982.1 CDS Psed_0875 NC_015312.1 928078 929058 R TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: sen:SACE_0816 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(928078..929058) Pseudonocardia dioxanivorans CB1190 10362696 YP_004330983.1 CDS Psed_0876 NC_015312.1 929055 930656 R PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: ami:Amir_0657 UDP-N-acetylglucosamine pyrophosphorylase; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(929055..930656) Pseudonocardia dioxanivorans CB1190 10362697 YP_004330984.1 CDS Psed_0877 NC_015312.1 931022 931486 D PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 931022..931486 Pseudonocardia dioxanivorans CB1190 10362698 YP_004330985.1 CDS Psed_0878 NC_015312.1 931597 932034 D KEGG: ske:Sked_32410 regulator of disulfide bond formation; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; PFAM: Peroxiredoxin, OsmC-like protein; peroxiredoxin 931597..932034 Pseudonocardia dioxanivorans CB1190 10362699 YP_004330986.1 CDS Psed_0879 NC_015312.1 932367 933371 D KEGG: svi:Svir_16070 delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 932367..933371 Pseudonocardia dioxanivorans CB1190 10362701 YP_004330987.1 CDS Psed_0880 NC_015312.1 933568 934242 D PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: amd:AMED_0567 LmbE family protein; LmbE family protein 933568..934242 Pseudonocardia dioxanivorans CB1190 10362702 YP_004330988.1 CDS Psed_0881 NC_015312.1 934289 934558 D PFAM: Protein of unknown function DUF2277; KEGG: ami:Amir_0703 hypothetical protein; hypothetical protein 934289..934558 Pseudonocardia dioxanivorans CB1190 10362703 YP_004330989.1 CDS Psed_0882 NC_015312.1 934580 937948 D KEGG: scb:SCAB_61611 protease; PFAM: Peptidase S41; WD40-like Beta Propeller; SMART: Peptidase S41; peptidase S41 934580..937948 Pseudonocardia dioxanivorans CB1190 10362704 YP_004330990.1 CDS Psed_0883 NC_015312.1 938034 939044 D KEGG: fra:Francci3_4341 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 938034..939044 Pseudonocardia dioxanivorans CB1190 10362705 YP_004330991.1 CDS Psed_0884 NC_015312.1 939041 939793 D KEGG: sen:SACE_7259 ABC transporter membrane protein; ABC transporter membrane protein 939041..939793 Pseudonocardia dioxanivorans CB1190 10362706 YP_004330992.1 CDS Psed_0885 NC_015312.1 939949 943533 D TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Transcription-repair-coupling factor domain; KEGG: sen:SACE_0826 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; transcription-repair coupling factor 939949..943533 Pseudonocardia dioxanivorans CB1190 10362707 YP_004330993.1 CDS Psed_0886 NC_015312.1 943665 944612 D KEGG: ami:Amir_0666 hypothetical protein; hypothetical protein 943665..944612 Pseudonocardia dioxanivorans CB1190 10362708 YP_004330994.1 CDS Psed_0887 NC_015312.1 944620 945636 D KEGG: svi:Svir_32280 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; nucleotide pyrophosphohydrolase 944620..945636 Pseudonocardia dioxanivorans CB1190 10362709 YP_004330995.1 CDS Psed_0888 NC_015312.1 945696 947096 D PFAM: Transposase, IS4-like; KEGG: nml:Namu_1755 transposase IS4 family protein; transposase IS4 family protein 945696..947096 Pseudonocardia dioxanivorans CB1190 10362710 YP_004330996.1 CDS Psed_0889 NC_015312.1 947228 948544 R KEGG: ami:Amir_4289 Dyp-type peroxidase; TIGRFAM: Tat-translocated enzyme; Dyp-type peroxidase; PFAM: Dyp-type peroxidase; Tat-translocated protein complement(947228..948544) Pseudonocardia dioxanivorans CB1190 10362711 YP_004330997.1 CDS Psed_0890 NC_015312.1 948556 949695 R PFAM: Peptidase M75, Imelysin; KEGG: ami:Amir_4288 hypothetical protein; peptidase M75, Imelysin complement(948556..949695) Pseudonocardia dioxanivorans CB1190 10362712 YP_004330998.1 CDS Psed_0891 NC_015312.1 949728 950549 R PFAM: Iron permease FTR1; KEGG: ami:Amir_4287 iron permease FTR1; iron permease complement(949728..950549) Pseudonocardia dioxanivorans CB1190 10362713 YP_004330999.1 CDS Psed_0892 NC_015312.1 950944 951777 D PFAM: Iron permease FTR1; KEGG: fal:FRAAL1404 transmembrane protein; iron permease 950944..951777 Pseudonocardia dioxanivorans CB1190 10362714 YP_004331000.1 CDS Psed_0893 NC_015312.1 951815 952942 D PFAM: Peptidase M75, Imelysin; KEGG: fri:FraEuI1c_6364 peptidase M75, imelysin; peptidase M75, Imelysin 951815..952942 Pseudonocardia dioxanivorans CB1190 10362715 YP_004331001.1 CDS Psed_0894 NC_015312.1 952951 954198 D KEGG: cai:Caci_3900 Dyp-type peroxidase; TIGRFAM: Tat-translocated enzyme; Twin-arginine translocation pathway, signal sequence; Dyp-type peroxidase; PFAM: Dyp-type peroxidase; Tat-translocated protein 952951..954198 Pseudonocardia dioxanivorans CB1190 10362716 YP_004331002.1 CDS Psed_0895 NC_015312.1 954213 954650 R KEGG: ami:Amir_0670 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; hypothetical protein complement(954213..954650) Pseudonocardia dioxanivorans CB1190 10362717 YP_004331003.1 CDS Psed_0896 NC_015312.1 954823 956115 D PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: sen:SACE_0838 phosphopyruvate hydratase; enolase 954823..956115 Pseudonocardia dioxanivorans CB1190 10362718 YP_004331004.1 CDS Psed_0897 NC_015312.1 956118 956633 D PFAM: Septum formation initiator; KEGG: sen:SACE_0839 septum formation initiator; septum formation initiator 956118..956633 Pseudonocardia dioxanivorans CB1190 10362719 YP_004331005.1 CDS Psed_0898 NC_015312.1 956630 957160 D PFAM: Protein of unknown function DUF501; KEGG: sna:Snas_5821 hypothetical protein; hypothetical protein 956630..957160 Pseudonocardia dioxanivorans CB1190 10362720 YP_004331006.1 CDS Psed_0899 NC_015312.1 957147 959261 R PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; KEGG: mil:ML5_5311 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase complement(957147..959261) Pseudonocardia dioxanivorans CB1190 10362721 YP_004331007.1 CDS Psed_0900 NC_015312.1 959373 960326 D PFAM: Ppx/GppA phosphatase; KEGG: sen:SACE_0843 Ppx/GppA family phosphatase; Ppx/GppA phosphatase 959373..960326 Pseudonocardia dioxanivorans CB1190 10362722 YP_004331008.1 CDS Psed_0901 NC_015312.1 960336 961049 D PFAM: Uracil-DNA glycosylase-like; KEGG: rop:ROP_60020 uracil-DNA glycosylase; uracil-DNA glycosylase 960336..961049 Pseudonocardia dioxanivorans CB1190 10362723 YP_004331009.1 CDS Psed_0902 NC_015312.1 961079 962554 D KEGG: ami:Amir_0688 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase (ubiquinone) 961079..962554 Pseudonocardia dioxanivorans CB1190 10362724 YP_004331010.1 CDS Psed_0903 NC_015312.1 962717 963736 R KEGG: sro:Sros_4162 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; hypothetical protein complement(962717..963736) Pseudonocardia dioxanivorans CB1190 10362725 YP_004331011.1 CDS Psed_0904 NC_015312.1 963733 964176 R KEGG: mav:MAV_2709 short chain dehydrogenase; manually curated; PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(963733..964176) Pseudonocardia dioxanivorans CB1190 10362726 YP_004331012.1 CDS Psed_0905 NC_015312.1 964288 965217 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msm:MSMEG_6677 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 964288..965217 Pseudonocardia dioxanivorans CB1190 10362727 YP_004331013.1 CDS Psed_0906 NC_015312.1 965443 965985 D PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sro:Sros_3264 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 965443..965985 Pseudonocardia dioxanivorans CB1190 10362729 YP_004331014.1 CDS Psed_0907 NC_015312.1 966672 967145 D KEGG: ank:AnaeK_3390 MJ0042 family finger-like protein; hypothetical protein 966672..967145 Pseudonocardia dioxanivorans CB1190 10362730 YP_004331015.1 CDS Psed_0909 NC_015312.1 967904 969442 D PFAM: Integrase, catalytic core; KEGG: mav:MAV_3533 transposase; integrase catalytic subunit 967904..969442 Pseudonocardia dioxanivorans CB1190 10362731 YP_004331016.1 CDS Psed_0910 NC_015312.1 969439 970218 D KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 969439..970218 Pseudonocardia dioxanivorans CB1190 10362732 YP_004331017.1 CDS Psed_0911 NC_015312.1 971810 972202 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cai:Caci_4804 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(971810..972202) Pseudonocardia dioxanivorans CB1190 10362733 YP_004331018.1 CDS Psed_0912 NC_015312.1 972462 973226 D KEGG: amd:AMED_6526 two-component system response regulator; PFAM: ANTAR; GAF; SMART: GAF; ANTAR domain-containing protein 972462..973226 Pseudonocardia dioxanivorans CB1190 10362734 YP_004331019.1 CDS Psed_0914 NC_015312.1 974176 975168 R PFAM: Luciferase-like, subgroup; KEGG: amd:AMED_3495 luciferase-like protein; luciferase-like protein complement(974176..975168) Pseudonocardia dioxanivorans CB1190 10362736 YP_004331020.1 CDS Psed_0915 NC_015312.1 975281 975862 R KEGG: pla:Plav_1269 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; phosphinothricin acetyltransferase complement(975281..975862) Pseudonocardia dioxanivorans CB1190 10362737 YP_004331021.1 CDS Psed_0916 NC_015312.1 975925 976932 R KEGG: aeh:Mlg_1624 hypothetical protein; hypothetical protein complement(975925..976932) Pseudonocardia dioxanivorans CB1190 10362738 YP_004331022.1 CDS Psed_0917 NC_015312.1 977009 977389 R KEGG: svi:Svir_02010 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator complement(977009..977389) Pseudonocardia dioxanivorans CB1190 10362739 YP_004331023.1 CDS Psed_0918 NC_015312.1 977464 977937 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amd:AMED_0761 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 977464..977937 Pseudonocardia dioxanivorans CB1190 10362740 YP_004331024.1 CDS Psed_0919 NC_015312.1 978010 978750 R KEGG: cai:Caci_0325 hypothetical protein; hypothetical protein complement(978010..978750) Pseudonocardia dioxanivorans CB1190 10362741 YP_004331025.1 CDS Psed_0920 NC_015312.1 978936 979670 R PFAM: Metallo-dependent phosphatase; KEGG: sco:SCO6075 hypothetical protein; metallophosphoesterase complement(978936..979670) Pseudonocardia dioxanivorans CB1190 10362742 YP_004331026.1 CDS Psed_0921 NC_015312.1 979775 980125 D KEGG: fre:Franean1_6246 hypothetical protein; hypothetical protein 979775..980125 Pseudonocardia dioxanivorans CB1190 10362743 YP_004331027.1 CDS Psed_0922 NC_015312.1 980290 980544 D KEGG: vcn:VOLCADRAFT_89522 hypothetical protein; hypothetical protein 980290..980544 Pseudonocardia dioxanivorans CB1190 10362744 YP_004331028.1 CDS Psed_0923 NC_015312.1 980801 981271 D KEGG: ppy:PPE_00386 hypothetical protein; hypothetical protein 980801..981271 Pseudonocardia dioxanivorans CB1190 10362745 YP_004331029.1 CDS Psed_0924 NC_015312.1 981274 981807 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aai:AARI_11220 GNAT family acetyltransferase; GCN5-like N-acetyltransferase complement(981274..981807) Pseudonocardia dioxanivorans CB1190 10362746 YP_004331030.1 CDS Psed_0925 NC_015312.1 982041 982877 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_5262 acetyltransferase; GCN5-like N-acetyltransferase 982041..982877 Pseudonocardia dioxanivorans CB1190 10362747 YP_004331031.1 CDS Psed_0926 NC_015312.1 982889 983344 R PFAM: Cupin 2, conserved barrel; KEGG: cai:Caci_6233 cupin 2 conserved barrel domain protein; cupin complement(982889..983344) Pseudonocardia dioxanivorans CB1190 10362748 YP_004331032.1 CDS Psed_0927 NC_015312.1 983389 984009 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sma:SAV_1382 TetR family transcriptional regulator; TetR family transcriptional regulator 983389..984009 Pseudonocardia dioxanivorans CB1190 10362749 YP_004331033.1 CDS Psed_0928 NC_015312.1 984101 984925 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rer:RER_54910 oxidoreductase; short-chain dehydrogenase/reductase SDR 984101..984925 Pseudonocardia dioxanivorans CB1190 10362750 YP_004331034.1 CDS Psed_0929 NC_015312.1 984948 986174 D KEGG: sma:SAV_1381 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; acyl-CoA dehydrogenase 984948..986174 Pseudonocardia dioxanivorans CB1190 10362751 YP_004331035.1 CDS Psed_0930 NC_015312.1 986184 986684 D KEGG: amd:AMED_2600 hypothetical protein; hypothetical protein 986184..986684 Pseudonocardia dioxanivorans CB1190 10362752 YP_004331036.1 CDS Psed_0931 NC_015312.1 986792 987601 D KEGG: sen:SACE_0895 hypothetical protein; hypothetical protein 986792..987601 Pseudonocardia dioxanivorans CB1190 10362753 YP_004331037.1 CDS Psed_0932 NC_015312.1 987744 988973 R TIGRFAM: Thiolase; KEGG: amd:AMED_8108 acetyl-CoA C-acetyltransferase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase complement(987744..988973) Pseudonocardia dioxanivorans CB1190 10362754 YP_004331038.1 CDS Psed_0933 NC_015312.1 989104 989559 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: amd:AMED_7439 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 989104..989559 Pseudonocardia dioxanivorans CB1190 10362755 YP_004331039.1 CDS Psed_0934 NC_015312.1 989740 990099 D PFAM: YCII-related; KEGG: rer:RER_52620 hypothetical protein; hypothetical protein 989740..990099 Pseudonocardia dioxanivorans CB1190 10362756 YP_004331040.1 CDS Psed_0935 NC_015312.1 990119 991426 D KEGG: sro:Sros_4397 sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 990119..991426 Pseudonocardia dioxanivorans CB1190 10362757 YP_004331041.1 CDS Psed_0936 NC_015312.1 991420 992601 R KEGG: tpr:Tpau_0903 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(991420..992601) Pseudonocardia dioxanivorans CB1190 10362758 YP_004331042.1 CDS Psed_0937 NC_015312.1 992975 996898 D KEGG: cai:Caci_6918 transcriptional regulator, XRE family; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; hypothetical protein 992975..996898 Pseudonocardia dioxanivorans CB1190 10362759 YP_004331043.1 CDS Psed_0938 NC_015312.1 996960 998330 D TIGRFAM: Cystathionine beta-synthase; KEGG: sen:SACE_0899 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cystathionine beta-synthase, core; cystathionine beta-synthase 996960..998330 Pseudonocardia dioxanivorans CB1190 10362760 YP_004331044.1 CDS Psed_0939 NC_015312.1 998360 999508 D PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: nml:Namu_4420 cystathionine gamma-synthase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 998360..999508 Pseudonocardia dioxanivorans CB1190 10362761 YP_004331045.1 CDS Psed_0940 NC_015312.1 999557 999778 R KEGG: sen:SACE_0903 hypothetical protein; hypothetical protein complement(999557..999778) Pseudonocardia dioxanivorans CB1190 10362762 YP_004331046.1 CDS Psed_0941 NC_015312.1 999859 1001157 D KEGG: svi:Svir_31840 threonine dehydratase; TIGRFAM: Threonine dehydratase II; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT; threonine dehydratase 999859..1001157 Pseudonocardia dioxanivorans CB1190 10362763 YP_004331047.1 CDS Psed_0942 NC_015312.1 1001165 1001656 R KEGG: sen:SACE_0907 transcription elongation factor G; TIGRFAM: Transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; transcription elongation factor GreA complement(1001165..1001656) Pseudonocardia dioxanivorans CB1190 10362764 YP_004331048.1 CDS Psed_0943 NC_015312.1 1002148 1003080 D KEGG: amd:AMED_8090 LmbE family protein; TIGRFAM: Mycothiol conjugate amidase, Mca; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; mycothiol conjugate amidase Mca 1002148..1003080 Pseudonocardia dioxanivorans CB1190 10362765 YP_004331049.1 CDS Psed_0944 NC_015312.1 1003088 1003705 R KEGG: amd:AMED_5086 hypothetical protein; hypothetical protein complement(1003088..1003705) Pseudonocardia dioxanivorans CB1190 10362766 YP_004331050.1 CDS Psed_0945 NC_015312.1 1003905 1004228 D KEGG: sen:SACE_0910 hypothetical protein; hypothetical protein 1003905..1004228 Pseudonocardia dioxanivorans CB1190 10362767 YP_004331051.1 CDS Psed_0946 NC_015312.1 1004271 1006286 D KEGG: sen:SACE_0923 hypothetical protein; hypothetical protein 1004271..1006286 Pseudonocardia dioxanivorans CB1190 10362768 YP_004331052.1 CDS Psed_0947 NC_015312.1 1006419 1007030 D KEGG: amd:AMED_8084 hypothetical protein; hypothetical protein 1006419..1007030 Pseudonocardia dioxanivorans CB1190 10362769 YP_004331053.1 CDS Psed_0948 NC_015312.1 1007050 1007733 R manually curated; TIGRFAM: HylII; KEGG: sen:SACE_0920 hemolysin III family channel protein; PFAM: Hly-III-related; hemolysin III family channel protein complement(1007050..1007733) Pseudonocardia dioxanivorans CB1190 10362770 YP_004331054.1 CDS Psed_0949 NC_015312.1 1007856 1008623 D PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: sen:SACE_0919 undecaprenyl pyrophosphate synthetase; UDP pyrophosphate synthase 1007856..1008623 Pseudonocardia dioxanivorans CB1190 10362771 YP_004331055.1 CDS Psed_0950 NC_015312.1 1008762 1009118 R hypothetical protein complement(1008762..1009118) Pseudonocardia dioxanivorans CB1190 10362772 YP_004331056.1 CDS Psed_0951 NC_015312.1 1009390 1009770 R hypothetical protein complement(1009390..1009770) Pseudonocardia dioxanivorans CB1190 10362773 YP_004331057.1 CDS Psed_0952 NC_015312.1 1010116 1011402 D KEGG: ami:Amir_0716 hypothetical protein; hypothetical protein 1010116..1011402 Pseudonocardia dioxanivorans CB1190 10362774 YP_004331058.1 CDS Psed_0953 NC_015312.1 1011703 1013058 D KEGG: sen:SACE_0915 PhoH-like phosphate starvation-induced protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; PhoH family protein 1011703..1013058 Pseudonocardia dioxanivorans CB1190 10362775 YP_004331059.1 CDS Psed_0954 NC_015312.1 1013232 1014683 R TIGRFAM: IMP dehydrogenase-related 1; KEGG: amd:AMED_8071 IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; IMP dehydrogenase complement(1013232..1014683) Pseudonocardia dioxanivorans CB1190 10362776 YP_004331060.1 CDS Psed_0955 NC_015312.1 1014810 1015844 D PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; KEGG: fre:Franean1_2019 ketopantoate reductase ApbA/PanE; ketopantoate reductase ApbA/PanE domain-containing protein 1014810..1015844 Pseudonocardia dioxanivorans CB1190 10362777 YP_004331061.1 CDS Psed_0956 NC_015312.1 1015875 1017416 R PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; TIGRFAM: DNA ligase, ATP-dependent; HAMAP: DNA ligase, ATP-dependent, bacterial/archaeal; KEGG: gob:Gobs_2344 DNA ligase I, ATP-dependent Dnl1; DNA ligase complement(1015875..1017416) Pseudonocardia dioxanivorans CB1190 10362778 YP_004331062.1 CDS Psed_0957 NC_015312.1 1017493 1018683 R KEGG: ami:Amir_5145 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate phosphodiesterase complement(1017493..1018683) Pseudonocardia dioxanivorans CB1190 10362779 YP_004331063.1 CDS Psed_0958 NC_015312.1 1018781 1020181 R HAMAP: Fumarate hydratase, class II; KEGG: ami:Amir_0720 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal; class II fumarate hydratase complement(1018781..1020181) Pseudonocardia dioxanivorans CB1190 10362780 YP_004331064.1 CDS Psed_0959 NC_015312.1 1020287 1020925 R PFAM: YkuD domain; KEGG: amd:AMED_8939 secreted protein; ErfK/YbiS/YcfS/YnhG family protein complement(1020287..1020925) Pseudonocardia dioxanivorans CB1190 10362781 YP_004331065.1 CDS Psed_0960 NC_015312.1 1021205 1022233 R TIGRFAM: Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase; KEGG: ami:Amir_0724 fructose 1,6-bisphosphatase II; PFAM: Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase; fructose-1,6-bisphosphatase complement(1021205..1022233) Pseudonocardia dioxanivorans CB1190 10362782 YP_004331066.1 CDS Psed_0961 NC_015312.1 1022326 1023084 D KEGG: rop:ROP_59280 hypothetical protein; hypothetical protein 1022326..1023084 Pseudonocardia dioxanivorans CB1190 10362783 YP_004331067.1 CDS Psed_0962 NC_015312.1 1023086 1023310 R TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: tpr:Tpau_3117 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; exodeoxyribonuclease 7 small subunit complement(1023086..1023310) Pseudonocardia dioxanivorans CB1190 10362784 YP_004331068.1 CDS Psed_0963 NC_015312.1 1023307 1024578 R TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exonuclease VII, large subunit; KEGG: sen:SACE_0937 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; exodeoxyribonuclease 7 large subunit complement(1023307..1024578) Pseudonocardia dioxanivorans CB1190 10362785 YP_004331069.1 CDS Psed_0964 NC_015312.1 1024575 1025225 R KEGG: amd:AMED_8055 hypothetical protein; hypothetical protein complement(1024575..1025225) Pseudonocardia dioxanivorans CB1190 10362786 YP_004331070.1 CDS Psed_0965 NC_015312.1 1025359 1026318 D PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: rer:RER_42340 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1025359..1026318 Pseudonocardia dioxanivorans CB1190 10362787 YP_004331071.1 CDS Psed_0966 NC_015312.1 1026248 1026901 R KEGG: ami:Amir_0730 hypothetical protein; hypothetical protein complement(1026248..1026901) Pseudonocardia dioxanivorans CB1190 10362788 YP_004331072.1 CDS Psed_0967 NC_015312.1 1026991 1028553 R PFAM: DNA recombination RmuC; KEGG: ace:Acel_1860 hypothetical protein; RmuC-domain-containing protein complement(1026991..1028553) Pseudonocardia dioxanivorans CB1190 10362789 YP_004331073.1 CDS Psed_0968 NC_015312.1 1028691 1029185 R KEGG: svi:Svir_31430 O-6-methylguanine DNA methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase complement(1028691..1029185) Pseudonocardia dioxanivorans CB1190 10362790 YP_004331074.1 CDS Psed_0969 NC_015312.1 1029182 1030726 R KEGG: svi:Svir_31420 DNA-3-methyladenine glycosylase II/DNA-O6-methylguanine--protein-cysteine S-methyltransferase/transcriptional regulator Ada; PFAM: Ada DNA repair, metal-binding; HTH transcriptional regulator, AraC; AlkA, N-terminal; HhH-GPD domain; SMART: Helix-turn-helix, AraC type, DNA binding domain; HhH-GPD domain; DNA repair protein and transcriptional regulator complement(1029182..1030726) Pseudonocardia dioxanivorans CB1190 10362791 YP_004331075.1 CDS Psed_0970 NC_015312.1 1030740 1031216 R KEGG: mmi:MMAR_3358 hypothetical protein; hypothetical protein complement(1030740..1031216) Pseudonocardia dioxanivorans CB1190 10362792 YP_004331076.1 CDS Psed_0971 NC_015312.1 1031340 1032413 D KEGG: amd:AMED_8047 translation-associated GTPase; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF 1031340..1032413 Pseudonocardia dioxanivorans CB1190 10362793 YP_004331077.1 CDS Psed_0972 NC_015312.1 1032482 1033753 R PFAM: Protein of unknown function DUF939; KEGG: gob:Gobs_2756 hypothetical protein; hypothetical protein complement(1032482..1033753) Pseudonocardia dioxanivorans CB1190 10362794 YP_004331078.1 CDS Psed_0973 NC_015312.1 1034104 1035777 R KEGG: cwo:Cwoe_0574 peptidase S15; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein complement(1034104..1035777) Pseudonocardia dioxanivorans CB1190 10362795 YP_004331079.1 CDS Psed_0974 NC_015312.1 1035799 1036515 R PFAM: Nitroreductase-like; KEGG: cti:RALTA_A1302 nitroreductase; nitroreductase complement(1035799..1036515) Pseudonocardia dioxanivorans CB1190 10362796 YP_004331080.1 CDS Psed_0975 NC_015312.1 1036512 1037042 R KEGG: mno:Mnod_8468 hypothetical protein; hypothetical protein complement(1036512..1037042) Pseudonocardia dioxanivorans CB1190 10362797 YP_004331081.1 CDS Psed_0976 NC_015312.1 1037143 1037772 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_3336 TetR family transcriptional regulator; TetR family transcriptional regulator 1037143..1037772 Pseudonocardia dioxanivorans CB1190 10362798 YP_004331082.1 CDS Psed_0977 NC_015312.1 1038326 1038757 D hypothetical protein 1038326..1038757 Pseudonocardia dioxanivorans CB1190 10362799 YP_004331083.1 CDS Psed_0978 NC_015312.1 1038723 1039742 R PFAM: Luciferase-like, subgroup; KEGG: nca:Noca_3005 luciferase protein; luciferase-like protein complement(1038723..1039742) Pseudonocardia dioxanivorans CB1190 10362800 YP_004331084.1 CDS Psed_0979 NC_015312.1 1039750 1041942 R PFAM: DNA helicase, UvrD/REP type; KEGG: amd:AMED_8980 helicase; UvrD/REP helicase complement(1039750..1041942) Pseudonocardia dioxanivorans CB1190 10362801 YP_004331085.1 CDS Psed_0981 NC_015312.1 1042341 1042457 R hypothetical protein complement(1042341..1042457) Pseudonocardia dioxanivorans CB1190 10362803 YP_004331086.1 CDS Psed_0982 NC_015312.1 1043293 1043652 R KEGG: mgi:Mflv_3345 fibronectin-attachment family protein; fibronectin-attachment family protein complement(1043293..1043652) Pseudonocardia dioxanivorans CB1190 10362804 YP_004331087.1 CDS Psed_0983 NC_015312.1 1043961 1044266 D KEGG: sro:Sros_8897 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 1043961..1044266 Pseudonocardia dioxanivorans CB1190 10362805 YP_004331088.1 CDS Psed_0984 NC_015312.1 1044259 1045161 D PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: saq:Sare_1540 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 1044259..1045161 Pseudonocardia dioxanivorans CB1190 10362806 YP_004331089.1 CDS Psed_0985 NC_015312.1 1045139 1045735 R KEGG: amd:AMED_0964 deaminase-reductase domain-containing protein; deaminase-reductase domain-containing protein complement(1045139..1045735) Pseudonocardia dioxanivorans CB1190 10362807 YP_004331090.1 CDS Psed_0986 NC_015312.1 1045856 1046923 R TIGRFAM: DHAP synthase, class 1; KEGG: amd:AMED_2459 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1045856..1046923) Pseudonocardia dioxanivorans CB1190 10362808 YP_004331091.1 CDS Psed_0987 NC_015312.1 1047117 1047728 R PFAM: Protein of unknown function DUF1470; KEGG: msm:MSMEG_6742 hypothetical protein; hypothetical protein complement(1047117..1047728) Pseudonocardia dioxanivorans CB1190 10362809 YP_004331092.1 CDS Psed_0988 NC_015312.1 1047818 1048258 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msm:MSMEG_6743 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 1047818..1048258 Pseudonocardia dioxanivorans CB1190 10362810 YP_004331093.1 CDS Psed_0989 NC_015312.1 1048268 1048564 R PFAM: Transcriptional coactivator/pterin dehydratase; KEGG: rop:ROP_59910 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase complement(1048268..1048564) Pseudonocardia dioxanivorans CB1190 10362811 YP_004331094.1 CDS Psed_0990 NC_015312.1 1048591 1049442 R KEGG: sen:SACE_0994 ABC transporter integral membrane protein; ABC transporter integral membrane protein complement(1048591..1049442) Pseudonocardia dioxanivorans CB1190 10362812 YP_004331095.1 CDS Psed_0991 NC_015312.1 1049442 1050422 R KEGG: ami:Amir_0751 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(1049442..1050422) Pseudonocardia dioxanivorans CB1190 10362813 YP_004331096.1 CDS Psed_0992 NC_015312.1 1050419 1051459 R KEGG: sen:SACE_0996 hypothetical protein; hypothetical protein complement(1050419..1051459) Pseudonocardia dioxanivorans CB1190 10362814 YP_004331097.1 CDS Psed_0993 NC_015312.1 1051615 1052499 D KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 1051615..1052499 Pseudonocardia dioxanivorans CB1190 10362815 YP_004331098.1 CDS Psed_0994 NC_015312.1 1052584 1053270 D KEGG: ami:Amir_0753 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 1052584..1053270 Pseudonocardia dioxanivorans CB1190 10362816 YP_004331099.1 CDS Psed_0995 NC_015312.1 1053267 1054586 D KEGG: ami:Amir_0754 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 1053267..1054586 Pseudonocardia dioxanivorans CB1190 10362817 YP_004331100.1 CDS Psed_0996 NC_015312.1 1054583 1055446 D PFAM: NUDIX hydrolase domain; KEGG: sen:SACE_0999 hypothetical protein; NUDIX hydrolase 1054583..1055446 Pseudonocardia dioxanivorans CB1190 10362818 YP_004331101.1 CDS Psed_0997 NC_015312.1 1055664 1056473 D KEGG: msm:MSMEG_5844 hypothetical protein; hypothetical protein 1055664..1056473 Pseudonocardia dioxanivorans CB1190 10362819 YP_004331102.1 CDS Psed_0998 NC_015312.1 1056606 1056755 R KEGG: cef:CE1010 hypothetical protein; hypothetical protein complement(1056606..1056755) Pseudonocardia dioxanivorans CB1190 10362820 YP_004331103.1 CDS Psed_0999 NC_015312.1 1056819 1058756 D TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: amd:AMED_8030 GTP-binding protein TypA; SMART: Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA 1056819..1058756 Pseudonocardia dioxanivorans CB1190 10362821 YP_004331104.1 CDS Psed_1000 NC_015312.1 1058847 1060751 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ami:Amir_0760 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 1058847..1060751 Pseudonocardia dioxanivorans CB1190 10362822 YP_004331105.1 CDS Psed_1001 NC_015312.1 1060989 1062692 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ols:Olsu_1266 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 1060989..1062692 Pseudonocardia dioxanivorans CB1190 10362823 YP_004331106.1 CDS Psed_1002 NC_015312.1 1062759 1063691 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sti:Sthe_2953 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 1062759..1063691 Pseudonocardia dioxanivorans CB1190 10362824 YP_004331107.1 CDS Psed_1003 NC_015312.1 1063775 1064746 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: gyc:GYMC61_1354 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 1063775..1064746 Pseudonocardia dioxanivorans CB1190 10362825 YP_004331108.1 CDS Psed_1004 NC_015312.1 1064746 1066860 D SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: sro:Sros_1953 glutathione import ATP-binding protein GsiA; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 1064746..1066860 Pseudonocardia dioxanivorans CB1190 10362826 YP_004331109.1 CDS Psed_1005 NC_015312.1 1067034 1067909 D KEGG: sen:SACE_1008 N-acetylglucosaminylphosphatidylinositol deacetylase; TIGRFAM: Mycothiol biosynthesis protein, MshB; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase 1067034..1067909 Pseudonocardia dioxanivorans CB1190 10362827 YP_004331110.1 CDS Psed_1006 NC_015312.1 1067906 1068265 D KEGG: amd:AMED_8022 hypothetical protein; hypothetical protein 1067906..1068265 Pseudonocardia dioxanivorans CB1190 10362828 YP_004331111.1 CDS Psed_1007 NC_015312.1 1068265 1069158 D KEGG: amd:AMED_8021 hypothetical protein; hypothetical protein 1068265..1069158 Pseudonocardia dioxanivorans CB1190 10362829 YP_004331112.1 CDS Psed_1008 NC_015312.1 1069140 1070147 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_1024 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(1069140..1070147) Pseudonocardia dioxanivorans CB1190 10362830 YP_004331113.1 CDS Psed_1009 NC_015312.1 1070284 1070610 D PFAM: 4Fe-4S binding domain; KEGG: sen:SACE_1010 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin 1070284..1070610 Pseudonocardia dioxanivorans CB1190 10362831 YP_004331114.1 CDS Psed_1010 NC_015312.1 1070607 1071725 D TIGRFAM: Succinyldiaminopimelate transaminase, actinobacteria; KEGG: amd:AMED_1027 aminotransferase; PFAM: Aminotransferase, class I/classII; succinyldiaminopimelate transaminase 1070607..1071725 Pseudonocardia dioxanivorans CB1190 10362832 YP_004331115.1 CDS Psed_1011 NC_015312.1 1071736 1072986 D PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4247 cyanate MFS transporter; major facilitator superfamily protein 1071736..1072986 Pseudonocardia dioxanivorans CB1190 10362833 YP_004331116.1 CDS Psed_1012 NC_015312.1 1072958 1073962 R KEGG: sen:SACE_1012 CHAD domain-containing protein; PFAM: CHAD; SMART: CHAD; CHAD domain-containing protein complement(1072958..1073962) Pseudonocardia dioxanivorans CB1190 10362834 YP_004331117.1 CDS Psed_1013 NC_015312.1 1074023 1075012 R TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: tbi:Tbis_2652 tetrahydrodipicolinate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(1074023..1075012) Pseudonocardia dioxanivorans CB1190 10362835 YP_004331118.1 CDS Psed_1014 NC_015312.1 1075047 1076174 D TIGRFAM: Succinyl-diaminopimelate desuccinylase; KEGG: nml:Namu_4301 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; succinyl-diaminopimelate desuccinylase 1075047..1076174 Pseudonocardia dioxanivorans CB1190 10362836 YP_004331119.1 CDS Psed_1015 NC_015312.1 1076250 1077014 D KEGG: sen:SACE_1020 lysine decarboxylase protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 1076250..1077014 Pseudonocardia dioxanivorans CB1190 10362837 YP_004331120.1 CDS Psed_1016 NC_015312.1 1077014 1077601 D KEGG: sen:SACE_1021 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 1077014..1077601 Pseudonocardia dioxanivorans CB1190 10362838 YP_004331121.1 CDS Psed_1017 NC_015312.1 1077598 1078491 D TIGRFAM: Dihydropteroate synthase; KEGG: req:REQ_14370 dihydropteroate synthase FolP2; PFAM: Pterin-binding; dihydropteroate synthase 1077598..1078491 Pseudonocardia dioxanivorans CB1190 10362839 YP_004331122.1 CDS Psed_1018 NC_015312.1 1078488 1079438 D PFAM: Glycosyl transferase, family 2; KEGG: svi:Svir_06330 glucosyl-3-phosphoglycerate synthase; family 2 glycosyl transferase 1078488..1079438 Pseudonocardia dioxanivorans CB1190 10362840 YP_004331123.1 CDS Psed_1019 NC_015312.1 1079448 1080386 D TIGRFAM: DivIVA domain; KEGG: sen:SACE_1026 hypothetical protein; DivIVA domain-containing protein 1079448..1080386 Pseudonocardia dioxanivorans CB1190 10362841 YP_004331124.1 CDS Psed_1020 NC_015312.1 1080383 1080865 D PFAM: Polyketide cyclase/dehydrase; KEGG: amd:AMED_1058 hypothetical protein; polyketide cyclase/dehydrase 1080383..1080865 Pseudonocardia dioxanivorans CB1190 10362842 YP_004331125.1 CDS Psed_1021 NC_015312.1 1080862 1081422 D TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: sen:SACE_1027 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; DNA-3-methyladenine glycosylase I 1080862..1081422 Pseudonocardia dioxanivorans CB1190 10362843 YP_004331126.1 CDS Psed_1022 NC_015312.1 1081606 1081773 D KEGG: mil:ML5_0910 hypothetical protein; hypothetical protein 1081606..1081773 Pseudonocardia dioxanivorans CB1190 10362844 YP_004331127.1 CDS Psed_1023 NC_015312.1 1081823 1082029 R hypothetical protein complement(1081823..1082029) Pseudonocardia dioxanivorans CB1190 10362845 YP_004331128.1 CDS Psed_1024 NC_015312.1 1082099 1082692 D PFAM: Protein of unknown function DUF1470; KEGG: ami:Amir_3432 protein of unknown function DUF1470; hypothetical protein 1082099..1082692 Pseudonocardia dioxanivorans CB1190 10362846 YP_004331129.1 CDS Psed_1025 NC_015312.1 1082729 1083892 R KEGG: ami:Amir_0793 glycogen synthase; TIGRFAM: Glycogen synthase, corynebacterial; PFAM: Glycosyl transferase, group 1; glycogen synthase complement(1082729..1083892) Pseudonocardia dioxanivorans CB1190 10362847 YP_004331130.1 CDS Psed_1026 NC_015312.1 1084100 1085350 D PFAM: Nucleotidyl transferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase GlgC, bacterial; KEGG: ami:Amir_0794 glucose-1-phosphate adenylyltransferase; Glucose-1-phosphate adenylyltransferase 1084100..1085350 Pseudonocardia dioxanivorans CB1190 10362848 YP_004331131.1 CDS Psed_1027 NC_015312.1 1085381 1085935 R PFAM: Methyltransferase type 11; KEGG: nml:Namu_2155 O-methyltransferase 3; type 11 methyltransferase complement(1085381..1085935) Pseudonocardia dioxanivorans CB1190 10362849 YP_004331132.1 CDS Psed_1028 NC_015312.1 1086174 1086839 D KEGG: amd:AMED_1067 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1086174..1086839 Pseudonocardia dioxanivorans CB1190 10362850 YP_004331133.1 CDS Psed_1029 NC_015312.1 1086836 1087546 D KEGG: ami:Amir_0796 transmembrane anti-sigma factor; hypothetical protein 1086836..1087546 Pseudonocardia dioxanivorans CB1190 10362851 YP_004331134.1 CDS Psed_1030 NC_015312.1 1087867 1089642 D KEGG: sen:SACE_1034 possinble serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 1087867..1089642 Pseudonocardia dioxanivorans CB1190 10362852 YP_004331135.1 CDS Psed_1031 NC_015312.1 1089681 1090112 D TIGRFAM: Twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; KEGG: ami:Amir_0798 sec-independent translocase; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; Sec-independent protein translocase tatB-like protein 1089681..1090112 Pseudonocardia dioxanivorans CB1190 10362853 YP_004331136.1 CDS Psed_1032 NC_015312.1 1090153 1090872 D KEGG: amd:AMED_2325 transmembrane protein; transmembrane protein 1090153..1090872 Pseudonocardia dioxanivorans CB1190 10362854 YP_004331137.1 CDS Psed_1033 NC_015312.1 1090946 1092334 R PFAM: Amidase; KEGG: msm:MSMEG_2497 amidase; amidase complement(1090946..1092334) Pseudonocardia dioxanivorans CB1190 10362855 YP_004331138.1 CDS Psed_1034 NC_015312.1 1092331 1093275 R KEGG: sen:SACE_3772 D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; glyoxylate reductase complement(1092331..1093275) Pseudonocardia dioxanivorans CB1190 10362856 YP_004331139.1 CDS Psed_1035 NC_015312.1 1093393 1093953 D KEGG: nda:Ndas_4752 hypothetical protein; hypothetical protein 1093393..1093953 Pseudonocardia dioxanivorans CB1190 10362857 YP_004331140.1 CDS Psed_1036 NC_015312.1 1093969 1094736 D PFAM: Asp/Glu/hydantoin racemase; KEGG: sen:SACE_3770 Asp/Glu racemase; Asp/Glu/hydantoin racemase 1093969..1094736 Pseudonocardia dioxanivorans CB1190 10362858 YP_004331141.1 CDS Psed_1037 NC_015312.1 1094771 1095505 D PFAM: Asp/Glu/hydantoin racemase; KEGG: sen:SACE_3769 decarboxylase; Asp/Glu/hydantoin racemase 1094771..1095505 Pseudonocardia dioxanivorans CB1190 10362859 YP_004331142.1 CDS Psed_1038 NC_015312.1 1095557 1096273 D KEGG: nda:Ndas_4755 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 1095557..1096273 Pseudonocardia dioxanivorans CB1190 10362860 YP_004331143.1 CDS Psed_1039 NC_015312.1 1096341 1097375 D PFAM: Auxin efflux carrier; KEGG: sen:SACE_4307 transport integral membrane protein; auxin efflux carrier family protein 1096341..1097375 Pseudonocardia dioxanivorans CB1190 10362861 YP_004331144.1 CDS Psed_1040 NC_015312.1 1097508 1098764 D KEGG: sen:SACE_3766 4-aminobutyrate transaminase; PFAM: Aminotransferase class-III; acetylornithine transaminase 1097508..1098764 Pseudonocardia dioxanivorans CB1190 10362862 YP_004331145.1 CDS Psed_1041 NC_015312.1 1098822 1099976 R PFAM: ATPase-like, ParA/MinD; Domain of unknown function DUF59; KEGG: svi:Svir_06470 chromosome partitioning ATPase; ATPase-like protein complement(1098822..1099976) Pseudonocardia dioxanivorans CB1190 10362863 YP_004331146.1 CDS Psed_1042 NC_015312.1 1100125 1100619 D manually curated; PFAM: HTH transcriptional regulator, MarR; KEGG: ami:Amir_0800 transcriptional regulator, MarR family; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 1100125..1100619 Pseudonocardia dioxanivorans CB1190 10362864 YP_004331147.1 CDS Psed_1043 NC_015312.1 1100649 1101167 R PFAM: Protein of unknown function DUF1003; KEGG: amd:AMED_1072 hypothetical protein; hypothetical protein complement(1100649..1101167) Pseudonocardia dioxanivorans CB1190 10362865 YP_004331148.1 CDS Psed_1044 NC_015312.1 1101160 1102470 R KEGG: ami:Amir_0802 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular domain; PRC-barrel; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; MgtE integral membrane protein complement(1101160..1102470) Pseudonocardia dioxanivorans CB1190 10362866 YP_004331149.1 CDS Psed_1045 NC_015312.1 1102521 1103408 D KEGG: mau:Micau_0670 phenazine biosynthesis protein PhzF family; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family 1102521..1103408 Pseudonocardia dioxanivorans CB1190 10362867 YP_004331150.1 CDS Psed_1046 NC_015312.1 1103558 1104517 D KEGG: ami:Amir_0805 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain; citryl-CoA lyase 1103558..1104517 Pseudonocardia dioxanivorans CB1190 10362868 YP_004331151.1 CDS Psed_1047 NC_015312.1 1104560 1105753 D KEGG: amd:AMED_1078 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 1104560..1105753 Pseudonocardia dioxanivorans CB1190 10362869 YP_004331152.1 CDS Psed_1048 NC_015312.1 1106064 1106600 D KEGG: ami:Amir_0806 hypothetical protein; hypothetical protein 1106064..1106600 Pseudonocardia dioxanivorans CB1190 10362870 YP_004331153.1 CDS Psed_1049 NC_015312.1 1106827 1108197 D PFAM: Bacterial extracellular solute-binding, family 1; KEGG: rop:ROP_60480 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 1106827..1108197 Pseudonocardia dioxanivorans CB1190 10362871 YP_004331154.1 CDS Psed_1050 NC_015312.1 1108194 1109153 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_60490 ABC transporter permease; ABC transporter permease 1108194..1109153 Pseudonocardia dioxanivorans CB1190 10362872 YP_004331155.1 CDS Psed_1051 NC_015312.1 1109168 1110004 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_1082 permease component of ABC-type sugar transport system; ABC transporter permease 1109168..1110004 Pseudonocardia dioxanivorans CB1190 10362873 YP_004331156.1 CDS Psed_1052 NC_015312.1 1110012 1111211 D PFAM: ABC transporter-like; KEGG: ami:Amir_0810 ABC transporter related; SMART: ATPase, AAA+ type, core; glycerol-3-phosphate-transporting ATPase 1110012..1111211 Pseudonocardia dioxanivorans CB1190 10362874 YP_004331157.1 CDS Psed_1053 NC_015312.1 1111500 1112168 D KEGG: sgr:SGR_2953 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 1111500..1112168 Pseudonocardia dioxanivorans CB1190 10362875 YP_004331158.1 CDS Psed_1054 NC_015312.1 1112172 1113182 D TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; KEGG: sgr:SGR_2954 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; 1-aminocyclopropane-1-carboxylate deaminase 1112172..1113182 Pseudonocardia dioxanivorans CB1190 10362876 YP_004331159.1 CDS Psed_1055 NC_015312.1 1113273 1114583 D PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit 1113273..1114583 Pseudonocardia dioxanivorans CB1190 10362877 YP_004331160.1 CDS Psed_1056 NC_015312.1 1114720 1115559 R KEGG: amd:AMED_1093 hypothetical protein; hypothetical protein complement(1114720..1115559) Pseudonocardia dioxanivorans CB1190 10362878 YP_004331161.1 CDS Psed_1057 NC_015312.1 1115564 1116211 R PFAM: Metallo-dependent phosphatase; KEGG: amd:AMED_1094 phosphoesterase; metallophosphoesterase complement(1115564..1116211) Pseudonocardia dioxanivorans CB1190 10362879 YP_004331162.1 CDS Psed_1058 NC_015312.1 1116278 1117072 D PFAM: Methyltransferase type 11; KEGG: mjl:Mjls_5458 methyltransferase type 12; type 11 methyltransferase 1116278..1117072 Pseudonocardia dioxanivorans CB1190 10362880 YP_004331163.1 CDS Psed_1059 NC_015312.1 1117073 1118065 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: amd:AMED_4084 rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(1117073..1118065) Pseudonocardia dioxanivorans CB1190 10362881 YP_004331164.1 CDS Psed_1060 NC_015312.1 1118084 1119187 R KEGG: sen:SACE_1051 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA complement(1118084..1119187) Pseudonocardia dioxanivorans CB1190 10362882 YP_004331165.1 CDS Psed_1061 NC_015312.1 1119480 1119998 D PFAM: MaoC-like dehydratase; KEGG: amd:AMED_1097 MaoC-like dehydratase; acyl dehydratase MaoC 1119480..1119998 Pseudonocardia dioxanivorans CB1190 10362883 YP_004331166.1 CDS Psed_1062 NC_015312.1 1120012 1120407 R KEGG: amd:AMED_1099 NUDIX hydrolase; manually curated; PFAM: NUDIX hydrolase domain; NUDIX hydrolase complement(1120012..1120407) Pseudonocardia dioxanivorans CB1190 10362884 YP_004331167.1 CDS Psed_1063 NC_015312.1 1120509 1120667 D KEGG: amd:AMED_1100 hypothetical protein; hypothetical protein 1120509..1120667 Pseudonocardia dioxanivorans CB1190 10362885 YP_004331168.1 CDS Psed_1064 NC_015312.1 1120672 1121208 D PFAM: Domain of unknown function DUF304l; KEGG: amd:AMED_1101 hypothetical protein; hypothetical protein 1120672..1121208 Pseudonocardia dioxanivorans CB1190 10362886 YP_004331169.1 CDS Psed_1065 NC_015312.1 1121260 1122123 D KEGG: ami:Amir_0820 PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 1121260..1122123 Pseudonocardia dioxanivorans CB1190 10362887 YP_004331170.1 CDS Psed_1066 NC_015312.1 1122167 1123057 D KEGG: svi:Svir_06610 RecB family exonuclease; RecB family exonuclease 1122167..1123057 Pseudonocardia dioxanivorans CB1190 10362888 YP_004331171.1 CDS Psed_1067 NC_015312.1 1123054 1123347 D KEGG: amd:AMED_1106 hypothetical protein; hypothetical protein 1123054..1123347 Pseudonocardia dioxanivorans CB1190 10362889 YP_004331172.1 CDS Psed_1068 NC_015312.1 1123394 1124647 R KEGG: sen:SACE_1059 hypothetical protein; hypothetical protein complement(1123394..1124647) Pseudonocardia dioxanivorans CB1190 10362890 YP_004331173.1 CDS Psed_1069 NC_015312.1 1124651 1126516 R KEGG: ami:Amir_0824 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein complement(1124651..1126516) Pseudonocardia dioxanivorans CB1190 10362891 YP_004331174.1 CDS Psed_1070 NC_015312.1 1126793 1127452 D KEGG: sen:SACE_1062 hypothetical protein; hypothetical protein 1126793..1127452 Pseudonocardia dioxanivorans CB1190 10362892 YP_004331175.1 CDS Psed_1071 NC_015312.1 1127614 1127844 D KEGG: rha:RHA1_ro06358 hypothetical protein; hypothetical protein 1127614..1127844 Pseudonocardia dioxanivorans CB1190 10362893 YP_004331176.1 CDS Psed_1072 NC_015312.1 1127908 1129848 R KEGG: cwo:Cwoe_0952 YhgE/Pip C-terminal domain protein; TIGRFAM: Phage infection protein, YhgE, C-terminal; Phage infection protein, YhgE, N-terminal; PFAM: ABC-2 type transporter; hypothetical protein complement(1127908..1129848) Pseudonocardia dioxanivorans CB1190 10362894 YP_004331177.1 CDS Psed_1073 NC_015312.1 1129879 1130553 R KEGG: sgr:SGR_5405 ABC transporter ATP-binding protein; hypothetical protein complement(1129879..1130553) Pseudonocardia dioxanivorans CB1190 10362895 YP_004331178.1 CDS Psed_1074 NC_015312.1 1130615 1130923 R KEGG: sen:SACE_1064 flavin binding monooxygenase; flavin binding monooxygenase complement(1130615..1130923) Pseudonocardia dioxanivorans CB1190 10362896 YP_004331179.1 CDS Psed_1075 NC_015312.1 1130920 1131741 R KEGG: ami:Amir_0828 transcriptional regulator, TetR family; manually curated; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator complement(1130920..1131741) Pseudonocardia dioxanivorans CB1190 10362897 YP_004331180.1 CDS Psed_1076 NC_015312.1 1131792 1132697 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mil:ML5_5255 short-chain dehydrogenase/reductase sdr; short-chain dehydrogenase/reductase SDR 1131792..1132697 Pseudonocardia dioxanivorans CB1190 10362898 YP_004331181.1 CDS Psed_1077 NC_015312.1 1132694 1133593 D KEGG: ami:Amir_0829 hypothetical protein; hypothetical protein 1132694..1133593 Pseudonocardia dioxanivorans CB1190 10362899 YP_004331182.1 CDS Psed_1078 NC_015312.1 1133590 1134492 D PFAM: Alpha/beta hydrolase fold-1; KEGG: sen:SACE_1067 alpha/beta hydrolase fold; alpha/beta hydrolase 1133590..1134492 Pseudonocardia dioxanivorans CB1190 10362900 YP_004331183.1 CDS Psed_1079 NC_015312.1 1134532 1135149 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_1068 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1134532..1135149) Pseudonocardia dioxanivorans CB1190 10362901 YP_004331184.1 CDS Psed_1080 NC_015312.1 1135233 1137560 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: amd:AMED_3510 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(1135233..1137560) Pseudonocardia dioxanivorans CB1190 10362902 YP_004331185.1 CDS Psed_1081 NC_015312.1 1137560 1138540 R KEGG: sro:Sros_3700 hypothetical protein; hypothetical protein complement(1137560..1138540) Pseudonocardia dioxanivorans CB1190 10362903 YP_004331186.1 CDS Psed_1082 NC_015312.1 1138702 1139796 D PFAM: Alpha/beta hydrolase fold-1; KEGG: svi:Svir_06730 predicted hydrolase or acyltransferase of alpha/beta superfamily; alpha/beta hydrolase 1138702..1139796 Pseudonocardia dioxanivorans CB1190 10362904 YP_004331187.1 CDS Psed_1083 NC_015312.1 1139862 1141034 D KEGG: ami:Amir_0833 molybdopterin biosynthesis-like protein MoeZ; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; UBA/THIF-type NAD/FAD binding protein 1139862..1141034 Pseudonocardia dioxanivorans CB1190 10362905 YP_004331188.1 CDS Psed_1084 NC_015312.1 1141385 1142701 R KEGG: bld:BLi00801 hypothetical protein; hypothetical protein complement(1141385..1142701) Pseudonocardia dioxanivorans CB1190 10362906 YP_004331189.1 CDS Psed_1085 NC_015312.1 1142766 1144028 D KEGG: bmn:BMA10247_0522 hypothetical protein; hypothetical protein 1142766..1144028 Pseudonocardia dioxanivorans CB1190 10362907 YP_004331190.1 CDS Psed_1086 NC_015312.1 1144186 1144938 D TIGRFAM: Conserved hypothetical protein CHP02569; KEGG: ami:Amir_0834 aminoglycoside phosphotransferase; hypothetical protein 1144186..1144938 Pseudonocardia dioxanivorans CB1190 10362908 YP_004331191.1 CDS Psed_1087 NC_015312.1 1145067 1146449 D KEGG: sgr:SGR_4575 nitrate extrusion protein; TIGRFAM: Nitrate transporter; PFAM: Major facilitator superfamily MFS-1; nitrite transporter 1145067..1146449 Pseudonocardia dioxanivorans CB1190 10362909 YP_004331192.1 CDS Psed_1088 NC_015312.1 1146512 1148572 D PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; KEGG: amd:AMED_1121 nitrate reductase catalytic subunit; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; nitrate reductase 1146512..1148572 Pseudonocardia dioxanivorans CB1190 10362910 YP_004331193.1 CDS Psed_1089 NC_015312.1 1148569 1150122 D KEGG: ami:Amir_0836 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; nitrite reductase (NAD(P)H) 1148569..1150122 Pseudonocardia dioxanivorans CB1190 10362911 YP_004331194.1 CDS Psed_1090 NC_015312.1 1150119 1152656 D TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: ami:Amir_0838 nitrite reductase (NAD(P)H), large subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; nitrite reductase (NAD(P)H) large subunit 1150119..1152656 Pseudonocardia dioxanivorans CB1190 10362912 YP_004331195.1 CDS Psed_1091 NC_015312.1 1152653 1153036 D KEGG: sro:Sros_5923 nitrite reductase (NAD(P)H); TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Rieske [2Fe-2S] iron-sulphur domain; nitrite reductase (NAD(P)H) small subunit 1152653..1153036 Pseudonocardia dioxanivorans CB1190 10362913 YP_004331196.1 CDS Psed_1092 NC_015312.1 1153033 1154223 D KEGG: sma:SAV_5120 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; uroporphyrinogen III synthase HEM4 1153033..1154223 Pseudonocardia dioxanivorans CB1190 10362914 YP_004331197.1 CDS Psed_1093 NC_015312.1 1154220 1154891 D PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: rop:ROP_64300 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 1154220..1154891 Pseudonocardia dioxanivorans CB1190 10362915 YP_004331198.1 CDS Psed_1094 NC_015312.1 1155037 1155318 R PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: svi:Svir_06790 predicted methylated DNA-protein cysteine methyltransferase; methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein complement(1155037..1155318) Pseudonocardia dioxanivorans CB1190 10362916 YP_004331199.1 CDS Psed_1095 NC_015312.1 1155335 1156114 R PFAM: Alpha/beta hydrolase fold-1; KEGG: rop:ROP_64360 hydrolase; alpha/beta hydrolase complement(1155335..1156114) Pseudonocardia dioxanivorans CB1190 10362917 YP_004331200.1 CDS Psed_1096 NC_015312.1 1156255 1159575 D PFAM: DNA helicase, UvrD/REP type; KEGG: ami:Amir_0852 UvrD/REP helicase; UvrD/REP helicase 1156255..1159575 Pseudonocardia dioxanivorans CB1190 10362918 YP_004331201.1 CDS Psed_1097 NC_015312.1 1159572 1163246 D PFAM: DNA helicase, UvrD/REP type; KEGG: ami:Amir_0851 UvrD/REP helicase; UvrD/REP helicase 1159572..1163246 Pseudonocardia dioxanivorans CB1190 10362919 YP_004331202.1 CDS Psed_1098 NC_015312.1 1163551 1163925 R KEGG: gob:Gobs_2005 DoxX family protein; DoxX family protein complement(1163551..1163925) Pseudonocardia dioxanivorans CB1190 10362920 YP_004331203.1 CDS Psed_1099 NC_015312.1 1164027 1164590 D KEGG: ami:Amir_2612 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 1164027..1164590 Pseudonocardia dioxanivorans CB1190 10362921 YP_004331204.1 CDS Psed_1100 NC_015312.1 1164600 1165715 D PFAM: Saccharopine dehydrogenase / Homospermidine synthase; KEGG: tbi:Tbis_3455 saccharopine dehydrogenase; saccharopine dehydrogenase 1164600..1165715 Pseudonocardia dioxanivorans CB1190 10362922 YP_004331205.1 CDS Psed_1101 NC_015312.1 1165767 1166825 D PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; KEGG: sen:SACE_1081 transmembrane cation transporter; TrkA-N domain-containing protein 1165767..1166825 Pseudonocardia dioxanivorans CB1190 10362923 YP_004331206.1 CDS Psed_1102 NC_015312.1 1166848 1168038 R PFAM: ROK; KEGG: cai:Caci_6688 ROK family protein; ROK family protein complement(1166848..1168038) Pseudonocardia dioxanivorans CB1190 10362924 YP_004331207.1 CDS Psed_1103 NC_015312.1 1168035 1169441 R TIGRFAM: Xylulokinase; KEGG: gob:Gobs_2984 xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; xylulokinase complement(1168035..1169441) Pseudonocardia dioxanivorans CB1190 10362925 YP_004331208.1 CDS Psed_1104 NC_015312.1 1169530 1170717 R TIGRFAM: Xylose isomerase, actinobacteria; HAMAP: Xylose isomerase; KEGG: ace:Acel_2064 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; xylose isomerase complement(1169530..1170717) Pseudonocardia dioxanivorans CB1190 10362926 YP_004331209.1 CDS Psed_1105 NC_015312.1 1170764 1171633 D KEGG: gbr:Gbro_3810 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 1170764..1171633 Pseudonocardia dioxanivorans CB1190 10362927 YP_004331210.1 CDS Psed_1106 NC_015312.1 1171871 1172602 D KEGG: kfl:Kfla_1919 hypothetical protein; hypothetical protein 1171871..1172602 Pseudonocardia dioxanivorans CB1190 10362928 YP_004331211.1 CDS Psed_1107 NC_015312.1 1172602 1173261 D PFAM: Peptidase C60, sortase A/B; KEGG: kra:Krad_3106 peptidase C60 sortase A and B; peptidase C60 sortase A and B 1172602..1173261 Pseudonocardia dioxanivorans CB1190 10362929 YP_004331212.1 CDS Psed_1108 NC_015312.1 1173321 1174640 D KEGG: svi:Svir_28610 gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase 1173321..1174640 Pseudonocardia dioxanivorans CB1190 10362930 YP_004331213.1 CDS Psed_1109 NC_015312.1 1174727 1175809 D KEGG: fre:Franean1_0886 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 1174727..1175809 Pseudonocardia dioxanivorans CB1190 10362931 YP_004331214.1 CDS Psed_1110 NC_015312.1 1175846 1177138 D PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: svi:Svir_06870 predicted Zn-dependent peptidase; peptidase M16 domain-containing protein 1175846..1177138 Pseudonocardia dioxanivorans CB1190 10362932 YP_004331215.1 CDS Psed_1111 NC_015312.1 1177135 1178508 D PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: svi:Svir_06880 predicted Zn-dependent peptidase; peptidase M16 domain-containing protein 1177135..1178508 Pseudonocardia dioxanivorans CB1190 10362933 YP_004331216.1 CDS Psed_1112 NC_015312.1 1178505 1179503 D KEGG: fal:FRAAL0398 NADH pyrophosphatase; PFAM: NUDIX hydrolase domain; Zinc ribbon, NADH pyrophosphatase; NADH pyrophosphatase-like, N-terminal; NAD(+) diphosphatase 1178505..1179503 Pseudonocardia dioxanivorans CB1190 10362934 YP_004331217.1 CDS Psed_1113 NC_015312.1 1179576 1179824 R KEGG: cfl:Cfla_2470 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-like protein, actinobacteria; PFAM: Glutaredoxin; glutaredoxin-like protein complement(1179576..1179824) Pseudonocardia dioxanivorans CB1190 10362935 YP_004331218.1 CDS Psed_1114 NC_015312.1 1179958 1182006 D KEGG: amd:AMED_1233 ATP-dependent DNA helicase; PFAM: DNA helicase, UvrD/REP type; Helicase/RNase D C-terminal, HRDC domain; SMART: Helicase/RNase D C-terminal, HRDC domain; UvrD/REP helicase 1179958..1182006 Pseudonocardia dioxanivorans CB1190 10362936 YP_004331219.1 CDS Psed_1115 NC_015312.1 1182124 1182327 D hypothetical protein 1182124..1182327 Pseudonocardia dioxanivorans CB1190 10362937 YP_004331220.1 CDS Psed_1116 NC_015312.1 1182452 1182829 D PFAM: Transcription factor WhiB; AT hook, DNA-binding motif; KEGG: sen:SACE_1093 WhiB-family transcriptional regulator; transcription factor WhiB 1182452..1182829 Pseudonocardia dioxanivorans CB1190 10362938 YP_004331221.1 CDS Psed_1117 NC_015312.1 1182877 1183140 D hypothetical protein 1182877..1183140 Pseudonocardia dioxanivorans CB1190 10362939 YP_004331222.1 CDS Psed_1118 NC_015312.1 1183343 1184713 R PFAM: ABC-1; KEGG: sen:SACE_1096 ABC transporter ATP-binding protein; ABC transporter complement(1183343..1184713) Pseudonocardia dioxanivorans CB1190 10362940 YP_004331223.1 CDS Psed_1119 NC_015312.1 1184674 1185714 R KEGG: amd:AMED_1241 hypothetical protein; hypothetical protein complement(1184674..1185714) Pseudonocardia dioxanivorans CB1190 10362941 YP_004331224.1 CDS Psed_1120 NC_015312.1 1185859 1186503 D KEGG: ami:Amir_0937 protein of unknown function DUF45; manually curated; PFAM: Protein of unknown function DUF45; hypothetical protein 1185859..1186503 Pseudonocardia dioxanivorans CB1190 10362942 YP_004331225.1 CDS Psed_1121 NC_015312.1 1186508 1188052 R KEGG: sen:SACE_1099 hypothetical protein; TIGRFAM: Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342; hypothetical protein complement(1186508..1188052) Pseudonocardia dioxanivorans CB1190 10362943 YP_004331226.1 CDS Psed_1122 NC_015312.1 1188334 1191243 D KEGG: amd:AMED_1246 hypothetical protein; HAMAP: Uncharacterised protein family UPF0182; PFAM: Uncharacterised protein family UPF0182; hypothetical protein 1188334..1191243 Pseudonocardia dioxanivorans CB1190 10362944 YP_004331227.1 CDS Psed_1123 NC_015312.1 1191633 1192973 R PFAM: Integrase, catalytic core, phage; KEGG: mmc:Mmcs_1422 phage integrase; integrase protein complement(1191633..1192973) Pseudonocardia dioxanivorans CB1190 10362946 YP_004331228.1 CDS Psed_1124 NC_015312.1 1192970 1193251 R hypothetical protein complement(1192970..1193251) Pseudonocardia dioxanivorans CB1190 10362947 YP_004331229.1 CDS Psed_1125 NC_015312.1 1193399 1194535 R KEGG: stp:Strop_0060 hypothetical protein; hypothetical protein complement(1193399..1194535) Pseudonocardia dioxanivorans CB1190 10362948 YP_004331230.1 CDS Psed_1126 NC_015312.1 1194532 1195479 R KEGG: sen:SACE_1124 hypothetical protein; PFAM: DNA primase/polymerase, bifunctional, N-terminal; SMART: DNA primase/polymerase, bifunctional, N-terminal; bifunctional DNA primase/polymerase complement(1194532..1195479) Pseudonocardia dioxanivorans CB1190 10362949 YP_004331231.1 CDS Psed_1127 NC_015312.1 1195679 1197928 R PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fre:Franean1_1448 cell divisionFtsK/SpoIIIE; DNA translocase FtsK complement(1195679..1197928) Pseudonocardia dioxanivorans CB1190 10362950 YP_004331232.1 CDS Psed_1128 NC_015312.1 1197928 1198890 R KEGG: kfl:Kfla_0387 hypothetical protein; hypothetical protein complement(1197928..1198890) Pseudonocardia dioxanivorans CB1190 10362951 YP_004331233.1 CDS Psed_1129 NC_015312.1 1198887 1199210 R KEGG: ami:Amir_3643 hypothetical protein; hypothetical protein complement(1198887..1199210) Pseudonocardia dioxanivorans CB1190 10362952 YP_004331234.1 CDS Psed_1130 NC_015312.1 1199207 1199368 R hypothetical protein complement(1199207..1199368) Pseudonocardia dioxanivorans CB1190 10362953 YP_004331235.1 CDS Psed_1131 NC_015312.1 1199365 1199568 R hypothetical protein complement(1199365..1199568) Pseudonocardia dioxanivorans CB1190 10362954 YP_004331236.1 CDS Psed_1132 NC_015312.1 1199760 1200617 D KEGG: nfa:nfa7010 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 1199760..1200617 Pseudonocardia dioxanivorans CB1190 10362955 YP_004331237.1 CDS Psed_1133 NC_015312.1 1200617 1201171 D KEGG: nfa:nfa7000 kinase; kinase 1200617..1201171 Pseudonocardia dioxanivorans CB1190 10362956 YP_004331238.1 CDS Psed_1134 NC_015312.1 1201360 1202118 D hypothetical protein 1201360..1202118 Pseudonocardia dioxanivorans CB1190 10362957 YP_004331239.1 CDS Psed_1135 NC_015312.1 1202445 1203551 R KEGG: mbt:JTY_1402 hypothetical protein; PFAM: RelA/SpoT; SMART: RelA/SpoT; RelA/SpoT domain-containing protein complement(1202445..1203551) Pseudonocardia dioxanivorans CB1190 10362958 YP_004331240.1 CDS Psed_1136 NC_015312.1 1204344 1205819 R PFAM: Protein of unknown function DUF2252; KEGG: nml:Namu_2955 hypothetical protein; hypothetical protein complement(1204344..1205819) Pseudonocardia dioxanivorans CB1190 10362959 YP_004331241.1 CDS Psed_1137 NC_015312.1 1205943 1206500 R PFAM: Ion transport 2; KEGG: sma:SAV_3759 hypothetical protein; Ion transport 2 domain-containing protein complement(1205943..1206500) Pseudonocardia dioxanivorans CB1190 10362960 YP_004331242.1 CDS Psed_1138 NC_015312.1 1206807 1207817 D PFAM: Bile acid:sodium symporter; KEGG: mac:MA2632 transmembrane transport protein; bile acid:sodium symporter 1206807..1207817 Pseudonocardia dioxanivorans CB1190 10362961 YP_004331243.1 CDS Psed_1139 NC_015312.1 1208073 1209119 R KEGG: sro:Sros_4871 hypothetical protein; hypothetical protein complement(1208073..1209119) Pseudonocardia dioxanivorans CB1190 10362962 YP_004331244.1 CDS Psed_1140 NC_015312.1 1209256 1210143 D KEGG: sro:Sros_4872 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1209256..1210143 Pseudonocardia dioxanivorans CB1190 10362963 YP_004331245.1 CDS Psed_1141 NC_015312.1 1210222 1210857 R PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sen:SACE_2518 hypothetical protein; bifunctional deaminase-reductase domain-containing protein complement(1210222..1210857) Pseudonocardia dioxanivorans CB1190 10362964 YP_004331246.1 CDS Psed_1145 NC_015312.1 1214360 1215592 D PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 1214360..1215592 Pseudonocardia dioxanivorans CB1190 10362968 YP_004331247.1 CDS Psed_1146 NC_015312.1 1216133 1217719 D PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 1216133..1217719 Pseudonocardia dioxanivorans CB1190 10362969 YP_004331248.1 CDS Psed_1147 NC_015312.1 1217716 1218507 D KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1217716..1218507 Pseudonocardia dioxanivorans CB1190 10362970 YP_004331249.1 CDS Psed_1149 NC_015312.1 1219073 1219705 R PFAM: ThiJ/PfpI; KEGG: cwo:Cwoe_5674 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein complement(1219073..1219705) Pseudonocardia dioxanivorans CB1190 10362972 YP_004331250.1 CDS Psed_1150 NC_015312.1 1220813 1221760 R KEGG: scb:SCAB_78731 acyl-CoA dehydrogenase; hypothetical protein complement(1220813..1221760) Pseudonocardia dioxanivorans CB1190 10362973 YP_004331251.1 CDS Psed_1151 NC_015312.1 1221787 1223262 R KEGG: rha:RHA1_ro02683 succinate-semialdehyde dehydrogenase (NAD(P)+); PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase complement(1221787..1223262) Pseudonocardia dioxanivorans CB1190 10362974 YP_004331252.1 CDS Psed_1152 NC_015312.1 1223259 1224923 R KEGG: pde:Pden_4407 permease for cytosine/purines, uracil, thiamine, allantoin transporter; hypothetical protein complement(1223259..1224923) Pseudonocardia dioxanivorans CB1190 10362975 YP_004331253.1 CDS Psed_1153 NC_015312.1 1225422 1227458 D KEGG: sno:Snov_1568 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 1225422..1227458 Pseudonocardia dioxanivorans CB1190 10362976 YP_004331254.1 CDS Psed_1154 NC_015312.1 1227455 1229461 D KEGG: msm:MSMEG_3973 N-methylhydantoinase; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 1227455..1229461 Pseudonocardia dioxanivorans CB1190 10362977 YP_004331255.1 CDS Psed_1155 NC_015312.1 1229547 1231064 D KEGG: rme:Rmet_1316 methane/phenol/toluene hydroxylase; PFAM: Methane/phenol/toluene hydroxylase; YHS; phenol 2-monooxygenase 1229547..1231064 Pseudonocardia dioxanivorans CB1190 10362978 YP_004331256.1 CDS Psed_1156 NC_015312.1 1231113 1231385 D hypothetical protein 1231113..1231385 Pseudonocardia dioxanivorans CB1190 10362979 YP_004331257.1 CDS Psed_1157 NC_015312.1 1231445 1231798 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rme:Rmet_1314 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1231445..1231798 Pseudonocardia dioxanivorans CB1190 10362980 YP_004331258.1 CDS Psed_1158 NC_015312.1 1231833 1232135 D PFAM: Monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5676 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 1231833..1232135 Pseudonocardia dioxanivorans CB1190 10362981 YP_004331259.1 CDS Psed_1159 NC_015312.1 1232166 1233185 D PFAM: Methane/phenol/toluene hydroxylase; KEGG: rme:Rmet_1312 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 1232166..1233185 Pseudonocardia dioxanivorans CB1190 10362982 YP_004331260.1 CDS Psed_1160 NC_015312.1 1233328 1234965 D KEGG: msm:MSMEG_3975 regulatory protein; transcriptional regulator CdaR 1233328..1234965 Pseudonocardia dioxanivorans CB1190 10362983 YP_004331261.1 CDS Psed_1161 NC_015312.1 1235064 1235993 R PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fal:FRAAL4441 LysR-type transcriptional regulator; LysR family transcriptional regulator complement(1235064..1235993) Pseudonocardia dioxanivorans CB1190 10362984 YP_004331262.1 CDS Psed_1162 NC_015312.1 1236015 1236737 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL4440 keto acyl reductase; short-chain dehydrogenase/reductase SDR 1236015..1236737 Pseudonocardia dioxanivorans CB1190 10362985 YP_004331263.1 CDS Psed_1163 NC_015312.1 1236775 1237068 D SMART: HTH transcriptional regulator, ArsR; KEGG: nfa:nfa28340 transcriptional regulator; regulatory protein ArsR 1236775..1237068 Pseudonocardia dioxanivorans CB1190 10362986 YP_004331264.1 CDS Psed_1164 NC_015312.1 1237065 1237454 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sen:SACE_4482 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1237065..1237454 Pseudonocardia dioxanivorans CB1190 10362987 YP_004331265.1 CDS Psed_1166 NC_015312.1 1238120 1238917 R KEGG: sna:Snas_1610 hypothetical protein; hypothetical protein complement(1238120..1238917) Pseudonocardia dioxanivorans CB1190 10362989 YP_004331266.1 CDS Psed_1167 NC_015312.1 1239232 1240512 D PFAM: Protein of unknown function DUF2088; KEGG: gob:Gobs_1559 hypothetical protein; hypothetical protein 1239232..1240512 Pseudonocardia dioxanivorans CB1190 10362990 YP_004331267.1 CDS Psed_1168 NC_015312.1 1240546 1241409 R KEGG: gob:Gobs_0783 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1240546..1241409) Pseudonocardia dioxanivorans CB1190 10362991 YP_004331268.1 CDS Psed_1169 NC_015312.1 1241475 1241636 R hypothetical protein complement(1241475..1241636) Pseudonocardia dioxanivorans CB1190 10362992 YP_004331269.1 CDS Psed_1170 NC_015312.1 1241736 1242494 D PFAM: Bacterial transcriptional activator domain; KEGG: cwo:Cwoe_4257 transcriptional regulator, SARP family; SARP family transcriptional regulator 1241736..1242494 Pseudonocardia dioxanivorans CB1190 10362993 YP_004331270.1 CDS Psed_1171 NC_015312.1 1242491 1242733 D PFAM: RNA-binding S4; KEGG: amd:AMED_0251 RNA-binding S4 domain-containing protein; RNA-binding S4 domain-containing protein 1242491..1242733 Pseudonocardia dioxanivorans CB1190 10362994 YP_004331271.1 CDS Psed_1172 NC_015312.1 1242759 1244801 R PFAM: Acyltransferase 3; KEGG: svi:Svir_21020 predicted acyltransferase; acyltransferase complement(1242759..1244801) Pseudonocardia dioxanivorans CB1190 10362995 YP_004331272.1 CDS Psed_1173 NC_015312.1 1244921 1245730 R PFAM: Lytic transglycosylase-like, catalytic; KEGG: cai:Caci_0731 lytic transglycosylase catalytic; Lytic transglycosylase catalytic complement(1244921..1245730) Pseudonocardia dioxanivorans CB1190 10362996 YP_004331273.1 CDS Psed_1174 NC_015312.1 1246149 1247216 R PFAM: Queuosine biosynthesis protein; KEGG: fri:FraEuI1c_5020 queuosine biosynthesis protein; Queuosine biosynthesis protein complement(1246149..1247216) Pseudonocardia dioxanivorans CB1190 10362997 YP_004331274.1 CDS Psed_1175 NC_015312.1 1247213 1247914 R KEGG: amd:AMED_1538 short-chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR complement(1247213..1247914) Pseudonocardia dioxanivorans CB1190 10362998 YP_004331275.1 CDS Psed_1176 NC_015312.1 1247968 1248438 D TIGRFAM: Redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: fre:Franean1_1287 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 1247968..1248438 Pseudonocardia dioxanivorans CB1190 10362999 YP_004331276.1 CDS Psed_1177 NC_015312.1 1248524 1248847 D PFAM: NIPSNAP; KEGG: bra:BRADO4102 hypothetical protein; NIPSNAP family containing protein 1248524..1248847 Pseudonocardia dioxanivorans CB1190 10363000 YP_004331277.1 CDS Psed_1178 NC_015312.1 1248893 1249699 D KEGG: dre:100332356 GTPase, IMAP family member 4-like; hypothetical protein 1248893..1249699 Pseudonocardia dioxanivorans CB1190 10363001 YP_004331278.1 CDS Psed_1179 NC_015312.1 1249719 1250456 D KEGG: gob:Gobs_4846 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 1249719..1250456 Pseudonocardia dioxanivorans CB1190 10363002 YP_004331279.1 CDS Psed_1180 NC_015312.1 1250467 1250859 R KEGG: tbi:Tbis_3044 hypothetical protein; hypothetical protein complement(1250467..1250859) Pseudonocardia dioxanivorans CB1190 10363003 YP_004331280.1 CDS Psed_1181 NC_015312.1 1250866 1251111 R hypothetical protein complement(1250866..1251111) Pseudonocardia dioxanivorans CB1190 10363004 YP_004331281.1 CDS Psed_1182 NC_015312.1 1251227 1252408 D PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: fre:Franean1_5603 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 1251227..1252408 Pseudonocardia dioxanivorans CB1190 10363005 YP_004331282.1 CDS Psed_1183 NC_015312.1 1252417 1253430 D PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: fri:FraEuI1c_1232 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 1252417..1253430 Pseudonocardia dioxanivorans CB1190 10363006 YP_004331283.1 CDS Psed_1184 NC_015312.1 1253513 1254022 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: sen:SACE_1104 PadR family transcriptional regulator; PadR family transcriptional regulator 1253513..1254022 Pseudonocardia dioxanivorans CB1190 10363007 YP_004331284.1 CDS Psed_1185 NC_015312.1 1254055 1255164 D SMART: Peptide chain release factor; TIGRFAM: Peptide chain release factor 2; KEGG: ami:Amir_0944 peptide chain release factor 2; HAMAP: Peptide chain release factor 2, bacterial; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; peptide chain release factor 2 1254055..1255164 Pseudonocardia dioxanivorans CB1190 10363008 YP_004331285.1 CDS Psed_1186 NC_015312.1 1255177 1256022 D SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: sen:SACE_1106 cell division ATP-binding protein; PFAM: ABC transporter-like; cell division ATP-binding protein FtsE 1255177..1256022 Pseudonocardia dioxanivorans CB1190 10363009 YP_004331286.1 CDS Psed_1187 NC_015312.1 1256061 1256963 D PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: sen:SACE_1107 cell division membrane protein; hypothetical protein 1256061..1256963 Pseudonocardia dioxanivorans CB1190 10363010 YP_004331287.1 CDS Psed_1188 NC_015312.1 1256995 1257480 D TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: svi:Svir_07720 SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 1256995..1257480 Pseudonocardia dioxanivorans CB1190 10363011 YP_004331288.1 CDS Psed_1189 NC_015312.1 1257477 1258382 D PFAM: Amidohydrolase 2; KEGG: sen:SACE_1109 hypothetical protein; amidohydrolase 1257477..1258382 Pseudonocardia dioxanivorans CB1190 10363012 YP_004331289.1 CDS Psed_1190 NC_015312.1 1259060 1260436 D PFAM: Major facilitator superfamily MFS-1; KEGG: art:Arth_2493 major facilitator transporter; major facilitator superfamily protein 1259060..1260436 Pseudonocardia dioxanivorans CB1190 10363014 YP_004331290.1 CDS Psed_1191 NC_015312.1 1260486 1262174 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: cai:Caci_6447 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease complement(1260486..1262174) Pseudonocardia dioxanivorans CB1190 10363015 YP_004331291.1 CDS Psed_1192 NC_015312.1 1262171 1262857 R PFAM: Isochorismatase-like; KEGG: fri:FraEuI1c_3512 isochorismatase hydrolase; isochorismatase hydrolase complement(1262171..1262857) Pseudonocardia dioxanivorans CB1190 10363016 YP_004331292.1 CDS Psed_1193 NC_015312.1 1262854 1263588 R PFAM: Isochorismatase-like; KEGG: cms:CMS_2996 isochorismatase hydrolase; isochorismatase hydrolase complement(1262854..1263588) Pseudonocardia dioxanivorans CB1190 10363017 YP_004331293.1 CDS Psed_1194 NC_015312.1 1263585 1264970 R KEGG: met:M446_3691 allophanate hydrolase; PFAM: Amidase; allophanate hydrolase complement(1263585..1264970) Pseudonocardia dioxanivorans CB1190 10363018 YP_004331294.1 CDS Psed_1195 NC_015312.1 1265032 1265721 R KEGG: nml:Namu_2025 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator complement(1265032..1265721) Pseudonocardia dioxanivorans CB1190 10363019 YP_004331295.1 CDS Psed_1196 NC_015312.1 1265797 1266519 R PFAM: Domain of unknown function DUF125, transmembrane; KEGG: mil:ML5_1718 hypothetical protein; hypothetical protein complement(1265797..1266519) Pseudonocardia dioxanivorans CB1190 10363020 YP_004331296.1 CDS Psed_1197 NC_015312.1 1266674 1267558 D KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 1266674..1267558 Pseudonocardia dioxanivorans CB1190 10363021 YP_004331297.1 CDS Psed_1198 NC_015312.1 1267745 1268245 D PFAM: Uncharacterised protein family YphA; KEGG: svi:Svir_07800 DoxX protein; DoxX family protein 1267745..1268245 Pseudonocardia dioxanivorans CB1190 10363022 YP_004331298.1 CDS Psed_1199 NC_015312.1 1268247 1269002 D KEGG: ami:Amir_0955 protein-disulfide isomerase-like protein; protein-disulfide isomerase-like protein 1268247..1269002 Pseudonocardia dioxanivorans CB1190 10363023 YP_004331299.1 CDS Psed_1200 NC_015312.1 1269063 1271045 R KEGG: sti:Sthe_0743 peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase active site domain-containing protein complement(1269063..1271045) Pseudonocardia dioxanivorans CB1190 10363024 YP_004331300.1 CDS Psed_1201 NC_015312.1 1271060 1272124 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein complement(1271060..1272124) Pseudonocardia dioxanivorans CB1190 10363025 YP_004331301.1 CDS Psed_1202 NC_015312.1 1272472 1274250 R KEGG: fra:Francci3_0910 recombinase; PFAM: Resolvase, N-terminal; Recombinase; SMART: Resolvase, N-terminal; resolvase domain-containing protein complement(1272472..1274250) Pseudonocardia dioxanivorans CB1190 10363027 YP_004331302.1 CDS Psed_1203 NC_015312.1 1274365 1274661 R hypothetical protein complement(1274365..1274661) Pseudonocardia dioxanivorans CB1190 10363028 YP_004331303.1 CDS Psed_1204 NC_015312.1 1274731 1275834 R KEGG: fra:Francci3_1684 resolvase-like protein; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal; resolvase domain-containing protein complement(1274731..1275834) Pseudonocardia dioxanivorans CB1190 10363029 YP_004331304.1 CDS Psed_1205 NC_015312.1 1276278 1276556 D KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator 1276278..1276556 Pseudonocardia dioxanivorans CB1190 10363030 YP_004331305.1 CDS Psed_1206 NC_015312.1 1276586 1277374 R KEGG: cai:Caci_9004 hypothetical protein; hypothetical protein complement(1276586..1277374) Pseudonocardia dioxanivorans CB1190 10363031 YP_004331306.1 CDS Psed_1207 NC_015312.1 1277371 1277898 R PFAM: Protein of unknown function DUF165; KEGG: kra:Krad_4383 protein of unknown function DUF165; hypothetical protein complement(1277371..1277898) Pseudonocardia dioxanivorans CB1190 10363032 YP_004331307.1 CDS Psed_1208 NC_015312.1 1277895 1278689 R PFAM: Recombinase; KEGG: fre:Franean1_2733 recombinase; recombinase complement(1277895..1278689) Pseudonocardia dioxanivorans CB1190 10363033 YP_004331308.1 CDS Psed_1209 NC_015312.1 1278686 1279579 R PFAM: DNA methylase N-4/N-6; KEGG: cai:Caci_4087 RNA methylase; DNA methylase N-4/N-6 domain-containing protein complement(1278686..1279579) Pseudonocardia dioxanivorans CB1190 10363034 YP_004331309.1 CDS Psed_1210 NC_015312.1 1279632 1280624 R KEGG: fre:Franean1_2543 hypothetical protein; hypothetical protein complement(1279632..1280624) Pseudonocardia dioxanivorans CB1190 10363035 YP_004331310.1 CDS Psed_1211 NC_015312.1 1280848 1282059 D PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_0075 transposase; transposase IS111A/IS1328/IS1533 1280848..1282059 Pseudonocardia dioxanivorans CB1190 10363036 YP_004331311.1 CDS Psed_1212 NC_015312.1 1282612 1283589 D KEGG: fre:Franean1_2740 hypothetical protein; hypothetical protein 1282612..1283589 Pseudonocardia dioxanivorans CB1190 10363037 YP_004331312.1 CDS Psed_1213 NC_015312.1 1283580 1284089 D KEGG: fre:Franean1_2741 hypothetical protein; hypothetical protein 1283580..1284089 Pseudonocardia dioxanivorans CB1190 10363038 YP_004331313.1 CDS Psed_1214 NC_015312.1 1284093 1286183 D KEGG: fre:Franean1_2742 hypothetical protein; hypothetical protein 1284093..1286183 Pseudonocardia dioxanivorans CB1190 10363039 YP_004331314.1 CDS Psed_1215 NC_015312.1 1286180 1287415 D KEGG: fre:Franean1_2547 hypothetical protein; hypothetical protein 1286180..1287415 Pseudonocardia dioxanivorans CB1190 10363040 YP_004331315.1 CDS Psed_1216 NC_015312.1 1287412 1289322 D KEGG: fra:Francci3_1693 type IV secretory pathway VirB4 components-like protein; type IV secretory pathway VirB4 components-like protein 1287412..1289322 Pseudonocardia dioxanivorans CB1190 10363041 YP_004331316.1 CDS Psed_1217 NC_015312.1 1289379 1290224 D KEGG: cai:Caci_9005 hypothetical protein; hypothetical protein 1289379..1290224 Pseudonocardia dioxanivorans CB1190 10363042 YP_004331317.1 CDS Psed_1218 NC_015312.1 1290274 1292817 D KEGG: fre:Franean1_2549 hypothetical protein; hypothetical protein 1290274..1292817 Pseudonocardia dioxanivorans CB1190 10363043 YP_004331318.1 CDS Psed_1219 NC_015312.1 1292946 1293989 D KEGG: fra:Francci3_2715 hypothetical protein; hypothetical protein 1292946..1293989 Pseudonocardia dioxanivorans CB1190 10363044 YP_004331319.1 CDS Psed_1220 NC_015312.1 1293994 1294950 D PFAM: NLP/P60; Lytic transglycosylase-like, catalytic; KEGG: amd:AMED_7298 NLP/P60 protein; NLP/P60 protein 1293994..1294950 Pseudonocardia dioxanivorans CB1190 10363045 YP_004331320.1 CDS Psed_1221 NC_015312.1 1295035 1296147 R KEGG: vvy:VV2237 hypothetical protein; hypothetical protein complement(1295035..1296147) Pseudonocardia dioxanivorans CB1190 10363046 YP_004331321.1 CDS Psed_1222 NC_015312.1 1296335 1297318 R manually curated; KEGG: ank:AnaeK_3342 hypothetical protein; hypothetical protein complement(1296335..1297318) Pseudonocardia dioxanivorans CB1190 10363047 YP_004331322.1 CDS Psed_1223 NC_015312.1 1297352 1297630 R hypothetical protein complement(1297352..1297630) Pseudonocardia dioxanivorans CB1190 10363048 YP_004331323.1 CDS Psed_1224 NC_015312.1 1297796 1298584 R PFAM: Protein of unknown function DUF45; KEGG: fal:FRAAL4995 hypothetical protein; hypothetical protein complement(1297796..1298584) Pseudonocardia dioxanivorans CB1190 10363049 YP_004331324.1 CDS Psed_1225 NC_015312.1 1298581 1299459 R KEGG: svi:Svir_09850 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA complement(1298581..1299459) Pseudonocardia dioxanivorans CB1190 10363050 YP_004331325.1 CDS Psed_1226 NC_015312.1 1299530 1300330 R hypothetical protein complement(1299530..1300330) Pseudonocardia dioxanivorans CB1190 10363051 YP_004331326.1 CDS Psed_1227 NC_015312.1 1300372 1300842 R hypothetical protein complement(1300372..1300842) Pseudonocardia dioxanivorans CB1190 10363052 YP_004331327.1 CDS Psed_1228 NC_015312.1 1300847 1301680 R KEGG: msp:Mspyr1_55350 hypothetical protein; hypothetical protein complement(1300847..1301680) Pseudonocardia dioxanivorans CB1190 10363053 YP_004331328.1 CDS Psed_1229 NC_015312.1 1301740 1302267 R KEGG: fre:Franean1_2565 hypothetical protein; hypothetical protein complement(1301740..1302267) Pseudonocardia dioxanivorans CB1190 10363054 YP_004331329.1 CDS Psed_1230 NC_015312.1 1302393 1303643 R PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: mea:Mex_2p1281 hypothetical protein; phosphoadenosine phosphosulfate reductase complement(1302393..1303643) Pseudonocardia dioxanivorans CB1190 10363055 YP_004331330.1 CDS Psed_1231 NC_015312.1 1303760 1304026 R hypothetical protein complement(1303760..1304026) Pseudonocardia dioxanivorans CB1190 10363056 YP_004331331.1 CDS Psed_1232 NC_015312.1 1304146 1304577 R hypothetical protein complement(1304146..1304577) Pseudonocardia dioxanivorans CB1190 10363057 YP_004331332.1 CDS Psed_1233 NC_015312.1 1304693 1305076 R hypothetical protein complement(1304693..1305076) Pseudonocardia dioxanivorans CB1190 10363058 YP_004331333.1 CDS Psed_1234 NC_015312.1 1305119 1305934 R KEGG: kra:Krad_4685 hypothetical protein; hypothetical protein complement(1305119..1305934) Pseudonocardia dioxanivorans CB1190 10363059 YP_004331334.1 CDS Psed_1235 NC_015312.1 1305941 1306498 R hypothetical protein complement(1305941..1306498) Pseudonocardia dioxanivorans CB1190 10363060 YP_004331335.1 CDS Psed_1236 NC_015312.1 1306532 1307119 R hypothetical protein complement(1306532..1307119) Pseudonocardia dioxanivorans CB1190 10363061 YP_004331336.1 CDS Psed_1237 NC_015312.1 1307216 1307800 R hypothetical protein complement(1307216..1307800) Pseudonocardia dioxanivorans CB1190 10363062 YP_004331337.1 CDS Psed_1238 NC_015312.1 1307941 1308816 R hypothetical protein complement(1307941..1308816) Pseudonocardia dioxanivorans CB1190 10363063 YP_004331338.1 CDS Psed_1239 NC_015312.1 1308878 1309447 R hypothetical protein complement(1308878..1309447) Pseudonocardia dioxanivorans CB1190 10363064 YP_004331339.1 CDS Psed_1240 NC_015312.1 1309633 1309941 R hypothetical protein complement(1309633..1309941) Pseudonocardia dioxanivorans CB1190 10363065 YP_004331340.1 CDS Psed_1241 NC_015312.1 1309993 1310292 R hypothetical protein complement(1309993..1310292) Pseudonocardia dioxanivorans CB1190 10363066 YP_004331341.1 CDS Psed_1242 NC_015312.1 1310315 1311130 R hypothetical protein complement(1310315..1311130) Pseudonocardia dioxanivorans CB1190 10363067 YP_004331342.1 CDS Psed_1243 NC_015312.1 1311145 1311432 R KEGG: rer:RER_24790 hypothetical protein; hypothetical protein complement(1311145..1311432) Pseudonocardia dioxanivorans CB1190 10363068 YP_004331343.1 CDS Psed_1244 NC_015312.1 1311449 1311844 R KEGG: rci:RCIX1357 hypothetical protein; hypothetical protein complement(1311449..1311844) Pseudonocardia dioxanivorans CB1190 10363069 YP_004331344.1 CDS Psed_1246 NC_015312.1 1313834 1314556 D KEGG: fre:Franean1_2833 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 1313834..1314556 Pseudonocardia dioxanivorans CB1190 10363071 YP_004331345.1 CDS Psed_1247 NC_015312.1 1314553 1315299 D PFAM: Haloacid dehalogenase-like hydrolase; KEGG: fre:Franean1_2832 HAD family hydrolase; haloacid dehalogenase 1314553..1315299 Pseudonocardia dioxanivorans CB1190 10363072 YP_004331346.1 CDS Psed_1248 NC_015312.1 1315329 1316204 D KEGG: fre:Franean1_2831 hypothetical protein; hypothetical protein 1315329..1316204 Pseudonocardia dioxanivorans CB1190 10363073 YP_004331347.1 CDS Psed_1249 NC_015312.1 1316201 1317388 D KEGG: fre:Franean1_2830 hypothetical protein; hypothetical protein 1316201..1317388 Pseudonocardia dioxanivorans CB1190 10363074 YP_004331348.1 CDS Psed_1250 NC_015312.1 1317385 1318230 D KEGG: fre:Franean1_2829 hypothetical protein; hypothetical protein 1317385..1318230 Pseudonocardia dioxanivorans CB1190 10363075 YP_004331349.1 CDS Psed_1251 NC_015312.1 1318227 1318805 D KEGG: fre:Franean1_2828 hypothetical protein; hypothetical protein 1318227..1318805 Pseudonocardia dioxanivorans CB1190 10363076 YP_004331350.1 CDS Psed_1252 NC_015312.1 1318802 1319626 D PFAM: Inositol monophosphatase; KEGG: kfl:Kfla_6457 inositol monophosphatase; inositol monophosphatase 1318802..1319626 Pseudonocardia dioxanivorans CB1190 10363077 YP_004331351.1 CDS Psed_1253 NC_015312.1 1319620 1321329 D KEGG: fre:Franean1_2827 aminoglycoside phosphotransferase; HAMAP: Thymidylate kinase; PFAM: Aminoglycoside phosphotransferase; thymidylate kinase 1319620..1321329 Pseudonocardia dioxanivorans CB1190 10363078 YP_004331352.1 CDS Psed_1254 NC_015312.1 1321331 1321621 R KEGG: sna:Snas_4860 NUDIX hydrolase; hypothetical protein complement(1321331..1321621) Pseudonocardia dioxanivorans CB1190 10363079 YP_004331353.1 CDS Psed_1255 NC_015312.1 1322087 1323133 D KEGG: mav:MAV_1971 hypothetical protein; hypothetical protein 1322087..1323133 Pseudonocardia dioxanivorans CB1190 10363080 YP_004331354.1 CDS Psed_1256 NC_015312.1 1323329 1324867 D PFAM: Integrase, catalytic core; KEGG: mav:MAV_3533 transposase; integrase catalytic subunit 1323329..1324867 Pseudonocardia dioxanivorans CB1190 10363081 YP_004331355.1 CDS Psed_1257 NC_015312.1 1324864 1325643 D KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1324864..1325643 Pseudonocardia dioxanivorans CB1190 10363082 YP_004331356.1 CDS Psed_1258 NC_015312.1 1325885 1326550 D hypothetical protein 1325885..1326550 Pseudonocardia dioxanivorans CB1190 10363083 YP_004331357.1 CDS Psed_1259 NC_015312.1 1327356 1328339 D hypothetical protein 1327356..1328339 Pseudonocardia dioxanivorans CB1190 10363084 YP_004331358.1 CDS Psed_1260 NC_015312.1 1328324 1331836 D KEGG: sen:SACE_5087 hypothetical protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1328324..1331836 Pseudonocardia dioxanivorans CB1190 10363085 YP_004331359.1 CDS Psed_1261 NC_015312.1 1332180 1333574 D KEGG: eba:ebA2494 hypothetical protein; hypothetical protein 1332180..1333574 Pseudonocardia dioxanivorans CB1190 10363086 YP_004331360.1 CDS Psed_1262 NC_015312.1 1333744 1334952 R KEGG: rop:ROP_pKNR-00470 hypothetical protein; hypothetical protein complement(1333744..1334952) Pseudonocardia dioxanivorans CB1190 10363087 YP_004331361.1 CDS Psed_1263 NC_015312.1 1335474 1336277 R KEGG: fri:FraEuI1c_0856 hypothetical protein; hypothetical protein complement(1335474..1336277) Pseudonocardia dioxanivorans CB1190 10363088 YP_004331362.1 CDS Psed_1264 NC_015312.1 1336274 1336630 R KEGG: amd:AMED_8298 hypothetical protein; hypothetical protein complement(1336274..1336630) Pseudonocardia dioxanivorans CB1190 10363089 YP_004331363.1 CDS Psed_1266 NC_015312.1 1337519 1337782 R KEGG: sco:SCO3449 hypothetical protein; hypothetical protein complement(1337519..1337782) Pseudonocardia dioxanivorans CB1190 10363091 YP_004331364.1 CDS Psed_1267 NC_015312.1 1337779 1338327 R KEGG: sco:SCO3450 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1337779..1338327) Pseudonocardia dioxanivorans CB1190 10363092 YP_004331365.1 CDS Psed_1268 NC_015312.1 1338573 1340201 D PFAM: Radical SAM; KEGG: stp:Strop_2597 radical SAM domain-containing protein; Radical SAM domain-containing protein 1338573..1340201 Pseudonocardia dioxanivorans CB1190 10363093 YP_004331366.1 CDS Psed_1269 NC_015312.1 1340198 1341010 D PFAM: Methyltransferase type 11; KEGG: mbt:JTY_3791 transferase; type 11 methyltransferase 1340198..1341010 Pseudonocardia dioxanivorans CB1190 10363094 YP_004331367.1 CDS Psed_1270 NC_015312.1 1341083 1341556 D hypothetical protein 1341083..1341556 Pseudonocardia dioxanivorans CB1190 10363095 YP_004331368.1 CDS Psed_1271 NC_015312.1 1341581 1341874 R PFAM: Protein of unknown function DUF427; KEGG: nfa:nfa19250 hypothetical protein; hypothetical protein complement(1341581..1341874) Pseudonocardia dioxanivorans CB1190 10363096 YP_004331369.1 CDS Psed_1272 NC_015312.1 1341940 1342485 R KEGG: sco:SCO3441 secreted protein; hypothetical protein complement(1341940..1342485) Pseudonocardia dioxanivorans CB1190 10363097 YP_004331370.1 CDS Psed_1273 NC_015312.1 1342520 1344118 R PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: mmi:MMAR_1618 multicopper oxidase, type 1, CueO; multicopper oxidase type 3 complement(1342520..1344118) Pseudonocardia dioxanivorans CB1190 10363098 YP_004331371.1 CDS Psed_1274 NC_015312.1 1344245 1344904 R PFAM: Glutaredoxin; KEGG: nca:Noca_2077 glutaredoxin; glutaredoxin complement(1344245..1344904) Pseudonocardia dioxanivorans CB1190 10363099 YP_004331372.1 CDS Psed_1275 NC_015312.1 1344901 1345248 R PFAM: Protein of unknown function DUF427; KEGG: mmi:MMAR_0866 hypothetical protein; hypothetical protein complement(1344901..1345248) Pseudonocardia dioxanivorans CB1190 10363100 YP_004331373.1 CDS Psed_1276 NC_015312.1 1345387 1346124 D KEGG: mbt:JTY_1688 transcriptional regulatory protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 1345387..1346124 Pseudonocardia dioxanivorans CB1190 10363101 YP_004331374.1 CDS Psed_1277 NC_015312.1 1346139 1347494 D KEGG: sco:SCO3443 pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, dimerisation; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; dihydrolipoyl dehydrogenase 1346139..1347494 Pseudonocardia dioxanivorans CB1190 10363102 YP_004331375.1 CDS Psed_1278 NC_015312.1 1347587 1348648 D PFAM: Methyltransferase type 11; KEGG: sco:SCO3459 hypothetical protein; type 11 methyltransferase 1347587..1348648 Pseudonocardia dioxanivorans CB1190 10363103 YP_004331376.1 CDS Psed_1279 NC_015312.1 1348661 1349212 D KEGG: amd:AMED_6852 hypothetical protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein 1348661..1349212 Pseudonocardia dioxanivorans CB1190 10363104 YP_004331377.1 CDS Psed_1280 NC_015312.1 1349341 1349883 D PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1349341..1349883 Pseudonocardia dioxanivorans CB1190 10363105 YP_004331378.1 CDS Psed_1281 NC_015312.1 1349865 1350875 R PFAM: Phosphate transporter; KEGG: nde:NIDE3702 inorganic phosphate transporter; phosphate transporter complement(1349865..1350875) Pseudonocardia dioxanivorans CB1190 10363106 YP_004331379.1 CDS Psed_1283 NC_015312.1 1351420 1351917 D hypothetical protein 1351420..1351917 Pseudonocardia dioxanivorans CB1190 10363108 YP_004331380.1 CDS Psed_1284 NC_015312.1 1352010 1352540 D KEGG: opr:Ocepr_0380 hypothetical protein; hypothetical protein 1352010..1352540 Pseudonocardia dioxanivorans CB1190 10363109 YP_004331381.1 CDS Psed_1285 NC_015312.1 1352542 1353267 D KEGG: mmi:MMAR_1621 transcriptional regulatory protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 1352542..1353267 Pseudonocardia dioxanivorans CB1190 10363110 YP_004331382.1 CDS Psed_1286 NC_015312.1 1353408 1354373 D PFAM: Domain of unknown function DUF302; KEGG: sco:SCO3438 hypothetical protein; hypothetical protein 1353408..1354373 Pseudonocardia dioxanivorans CB1190 10363111 YP_004331383.1 CDS Psed_1287 NC_015312.1 1354395 1355156 D KEGG: sco:SCO3437 integral membrane protein; hypothetical protein 1354395..1355156 Pseudonocardia dioxanivorans CB1190 10363112 YP_004331384.1 CDS Psed_1288 NC_015312.1 1355216 1357666 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: nha:Nham_4423 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(1355216..1357666) Pseudonocardia dioxanivorans CB1190 10363113 YP_004331385.1 CDS Psed_1289 NC_015312.1 1357927 1359132 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: pth:PTH_2396 transposase and inactivated derivatives; transposase IS116/IS110/IS902 family protein 1357927..1359132 Pseudonocardia dioxanivorans CB1190 10363114 YP_004331386.1 CDS Psed_1290 NC_015312.1 1359150 1359374 R PFAM: Heavy metal transport/detoxification protein; KEGG: mmg:MTBMA_c01180 cation transport ATPase; heavy metal transport/detoxification protein complement(1359150..1359374) Pseudonocardia dioxanivorans CB1190 10363115 YP_004331387.1 CDS Psed_1291 NC_015312.1 1359485 1359895 D KEGG: mlu:Mlut_06140 predicted transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 1359485..1359895 Pseudonocardia dioxanivorans CB1190 10363116 YP_004331388.1 CDS Psed_1292 NC_015312.1 1360004 1360552 D PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nca:Noca_1643 hypothetical protein; alkyl hydroperoxide reductase 1360004..1360552 Pseudonocardia dioxanivorans CB1190 10363117 YP_004331389.1 CDS Psed_1293 NC_015312.1 1360520 1361872 R PFAM: Major facilitator superfamily MFS-1; KEGG: ace:Acel_1610 major facilitator transporter; major facilitator superfamily protein complement(1360520..1361872) Pseudonocardia dioxanivorans CB1190 10363118 YP_004331390.1 CDS Psed_1294 NC_015312.1 1361841 1363286 R KEGG: saq:Sare_4668 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mercury(II) reductase complement(1361841..1363286) Pseudonocardia dioxanivorans CB1190 10363119 YP_004331391.1 CDS Psed_1295 NC_015312.1 1363442 1364059 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_5058 transcriptional regulator, TetR family; TetR family transcriptional regulator 1363442..1364059 Pseudonocardia dioxanivorans CB1190 10363120 YP_004331392.1 CDS Psed_1296 NC_015312.1 1364098 1364646 D PFAM: Carboxymuconolactone decarboxylase; KEGG: sit:TM1040_0320 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1364098..1364646 Pseudonocardia dioxanivorans CB1190 10363121 YP_004331393.1 CDS Psed_1297 NC_015312.1 1364646 1365323 D KEGG: sen:SACE_2965 haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase; haloacid dehalogenase 1364646..1365323 Pseudonocardia dioxanivorans CB1190 10363122 YP_004331394.1 CDS Psed_1298 NC_015312.1 1365320 1365664 R KEGG: amd:AMED_8842 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-like protein, actinobacteria; PFAM: Glutaredoxin; glutaredoxin-like protein complement(1365320..1365664) Pseudonocardia dioxanivorans CB1190 10363123 YP_004331395.1 CDS Psed_1299 NC_015312.1 1365865 1366101 D hypothetical protein 1365865..1366101 Pseudonocardia dioxanivorans CB1190 10363124 YP_004331396.1 CDS Psed_1300 NC_015312.1 1366103 1366969 R PFAM: Cytochrome c assembly protein, transmembrane domain; KEGG: mab:MAB_4275c hypothetical protein; cytochrome c biogenesis protein transmembrane region complement(1366103..1366969) Pseudonocardia dioxanivorans CB1190 10363125 YP_004331397.1 CDS Psed_1301 NC_015312.1 1366975 1367505 R PFAM: Redoxin; KEGG: mbt:JTY_1690 lipoprotein; redoxin domain-containing protein complement(1366975..1367505) Pseudonocardia dioxanivorans CB1190 10363126 YP_004331398.1 CDS Psed_1302 NC_015312.1 1367739 1368089 D PFAM: Protein of unknown function DUF156; KEGG: mbt:JTY_0992 hypothetical protein; hypothetical protein 1367739..1368089 Pseudonocardia dioxanivorans CB1190 10363127 YP_004331399.1 CDS Psed_1303 NC_015312.1 1368086 1368298 D PFAM: Heavy metal transport/detoxification protein; KEGG: bae:BATR1942_14715 copper insertion chaperone and transporter component; heavy metal transport/detoxification protein 1368086..1368298 Pseudonocardia dioxanivorans CB1190 10363128 YP_004331400.1 CDS Psed_1304 NC_015312.1 1368324 1370537 D TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mmi:MMAR_1431 cation transport ATPase, ZntA; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 1368324..1370537 Pseudonocardia dioxanivorans CB1190 10363129 YP_004331401.1 CDS Psed_1305 NC_015312.1 1370538 1370915 R KEGG: mbt:JTY_1684 hypothetical membrane protein; hypothetical protein complement(1370538..1370915) Pseudonocardia dioxanivorans CB1190 10363130 YP_004331402.1 CDS Psed_1306 NC_015312.1 1371002 1371460 R KEGG: ami:Amir_4079 conserved hypothetical membrane spanning protein; hypothetical protein complement(1371002..1371460) Pseudonocardia dioxanivorans CB1190 10363131 YP_004331403.1 CDS Psed_1307 NC_015312.1 1371530 1372210 R KEGG: saq:Sare_4665 transmembrane anti-sigma factor; hypothetical protein complement(1371530..1372210) Pseudonocardia dioxanivorans CB1190 10363132 YP_004331404.1 CDS Psed_1308 NC_015312.1 1372197 1372742 R KEGG: saq:Sare_4666 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1372197..1372742) Pseudonocardia dioxanivorans CB1190 10363133 YP_004331405.1 CDS Psed_1309 NC_015312.1 1372860 1373336 R KEGG: cai:Caci_3639 conserved hypothetical membrane spanning protein; hypothetical protein complement(1372860..1373336) Pseudonocardia dioxanivorans CB1190 10363134 YP_004331406.1 CDS Psed_1310 NC_015312.1 1373481 1373960 R KEGG: nca:Noca_4944 hypothetical protein; hypothetical protein complement(1373481..1373960) Pseudonocardia dioxanivorans CB1190 10363135 YP_004331407.1 CDS Psed_1311 NC_015312.1 1374008 1374427 R KEGG: nca:Noca_4945 regulatory protein, MerR; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(1374008..1374427) Pseudonocardia dioxanivorans CB1190 10363136 YP_004331408.1 CDS Psed_1312 NC_015312.1 1374484 1375269 R PFAM: Phytanoyl-CoA dioxygenase; KEGG: kfl:Kfla_5042 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase complement(1374484..1375269) Pseudonocardia dioxanivorans CB1190 10363137 YP_004331409.1 CDS Psed_1313 NC_015312.1 1375282 1375971 R PFAM: Alkylmercury lyase; KEGG: sna:Snas_5375 alkylmercury lyase; alkylmercury lyase complement(1375282..1375971) Pseudonocardia dioxanivorans CB1190 10363138 YP_004331410.1 CDS Psed_1314 NC_015312.1 1375976 1376629 R KEGG: sep:SE0086 alkylmercury lyase; PFAM: Alkylmercury lyase; Alkylmercury lyase complement(1375976..1376629) Pseudonocardia dioxanivorans CB1190 10363139 YP_004331411.1 CDS Psed_1315 NC_015312.1 1376764 1377042 R KEGG: ach:Achl_4530 hypothetical protein; hypothetical protein complement(1376764..1377042) Pseudonocardia dioxanivorans CB1190 10363140 YP_004331412.1 CDS Psed_1316 NC_015312.1 1377060 1377422 R KEGG: mmi:MMAR_p13 transcriptional repressor protein, MerR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(1377060..1377422) Pseudonocardia dioxanivorans CB1190 10363141 YP_004331413.1 CDS Psed_1317 NC_015312.1 1377549 1378970 D TIGRFAM: Mercury reductase, MerA; KEGG: mil:ML5_4212 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mercuric reductase 1377549..1378970 Pseudonocardia dioxanivorans CB1190 10363142 YP_004331414.1 CDS Psed_1318 NC_015312.1 1378990 1379433 D KEGG: nca:Noca_4945 regulatory protein, MerR; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 1378990..1379433 Pseudonocardia dioxanivorans CB1190 10363143 YP_004331415.1 CDS Psed_1319 NC_015312.1 1379473 1379793 R KEGG: hau:Haur_0682 NUDIX hydrolase; NUDIX hydrolase complement(1379473..1379793) Pseudonocardia dioxanivorans CB1190 10363144 YP_004331416.1 CDS Psed_1320 NC_015312.1 1380014 1380313 R KEGG: nca:Noca_4943 hypothetical protein; hypothetical protein complement(1380014..1380313) Pseudonocardia dioxanivorans CB1190 10363145 YP_004331417.1 CDS Psed_1321 NC_015312.1 1380428 1381243 R KEGG: fra:Francci3_1851 hypothetical protein; hypothetical protein complement(1380428..1381243) Pseudonocardia dioxanivorans CB1190 10363146 YP_004331418.1 CDS Psed_1322 NC_015312.1 1381240 1381698 R manually curated; KEGG: amd:AMED_8298 hypothetical protein; hypothetical protein complement(1381240..1381698) Pseudonocardia dioxanivorans CB1190 10363147 YP_004331419.1 CDS Psed_1323 NC_015312.1 1383048 1383422 D KEGG: mil:ML5_1144 hypothetical protein; hypothetical protein 1383048..1383422 Pseudonocardia dioxanivorans CB1190 10363148 YP_004331420.1 CDS Psed_1324 NC_015312.1 1383419 1383727 D KEGG: stp:Strop_1661 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1383419..1383727 Pseudonocardia dioxanivorans CB1190 10363149 YP_004331421.1 CDS Psed_1325 NC_015312.1 1384109 1384462 R hypothetical protein complement(1384109..1384462) Pseudonocardia dioxanivorans CB1190 10363150 YP_004331422.1 CDS Psed_1326 NC_015312.1 1384459 1385241 R PFAM: Nitroreductase-like; KEGG: gob:Gobs_3234 nitroreductase; nitroreductase complement(1384459..1385241) Pseudonocardia dioxanivorans CB1190 10363151 YP_004331423.1 CDS Psed_1327 NC_015312.1 1385282 1386508 R KEGG: bbr:BB1086 thiolase; PFAM: Thiolase, C-terminal; Beta-ketoacyl synthase, N-terminal; propanoyl-CoA C-acyltransferase complement(1385282..1386508) Pseudonocardia dioxanivorans CB1190 10363152 YP_004331424.1 CDS Psed_1328 NC_015312.1 1386531 1388096 R KEGG: chl:Chy400_4095 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(1386531..1388096) Pseudonocardia dioxanivorans CB1190 10363153 YP_004331425.1 CDS Psed_1329 NC_015312.1 1388263 1389975 D KEGG: mva:Mvan_4407 GAF sensor protein; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR 1388263..1389975 Pseudonocardia dioxanivorans CB1190 10363154 YP_004331426.1 CDS Psed_1330 NC_015312.1 1390232 1391647 D KEGG: sin:YN1551_2025 hypothetical protein; hypothetical protein 1390232..1391647 Pseudonocardia dioxanivorans CB1190 10363155 YP_004331427.1 CDS Psed_1331 NC_015312.1 1391755 1392726 D TIGRFAM: LPPG:Fo 2-phospho-L-lactate transferase; HAMAP: LPPG:FO 2-phospho-L-lactate transferase; KEGG: rrs:RoseRS_1138 LPPG:FO 2-phospho-L-lactate transferase; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; LPPG:FO 2-phospho-L-lactate transferase 1391755..1392726 Pseudonocardia dioxanivorans CB1190 10363156 YP_004331428.1 CDS Psed_1332 NC_015312.1 1392763 1393779 R KEGG: sen:SACE_3707 branched-chain amino acid binding protein; branched-chain amino acid binding protein complement(1392763..1393779) Pseudonocardia dioxanivorans CB1190 10363157 YP_004331429.1 CDS Psed_1333 NC_015312.1 1393925 1395028 D PFAM: Luciferase-like, subgroup; KEGG: swi:Swit_4272 luciferase protein; luciferase-like protein 1393925..1395028 Pseudonocardia dioxanivorans CB1190 10363158 YP_004331430.1 CDS Psed_1334 NC_015312.1 1395025 1395861 D KEGG: bra:BRADO6046 bifunctional enzyme with isomerase/decarboxylase activity; PFAM: Fumarylacetoacetase, C-terminal-like; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1395025..1395861 Pseudonocardia dioxanivorans CB1190 10363159 YP_004331431.1 CDS Psed_1335 NC_015312.1 1395858 1396772 D PFAM: Ornithine cyclodeaminase/mu-crystallin; KEGG: swi:Swit_3083 ornithine cyclodeaminase; ornithine cyclodeaminase/mu-crystallin 1395858..1396772 Pseudonocardia dioxanivorans CB1190 10363160 YP_004331432.1 CDS Psed_1336 NC_015312.1 1396769 1397680 D TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: sro:Sros_7523 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; dihydrodipicolinate synthase 1396769..1397680 Pseudonocardia dioxanivorans CB1190 10363161 YP_004331433.1 CDS Psed_1337 NC_015312.1 1397750 1398874 D KEGG: swi:Swit_3086 gentisate 1 2-dioxygenase-like protein; gentisate 1 2-dioxygenase-like protein 1397750..1398874 Pseudonocardia dioxanivorans CB1190 10363162 YP_004331434.1 CDS Psed_1338 NC_015312.1 1398871 1399782 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pen:PSEEN2584 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1398871..1399782) Pseudonocardia dioxanivorans CB1190 10363163 YP_004331435.1 CDS Psed_1339 NC_015312.1 1399825 1400760 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: fal:FRAAL0422 oxidoreductase; NAD-dependent epimerase/dehydratase complement(1399825..1400760) Pseudonocardia dioxanivorans CB1190 10363164 YP_004331436.1 CDS Psed_1340 NC_015312.1 1400837 1401409 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL0421 regulatory protein; TetR family transcriptional regulator 1400837..1401409 Pseudonocardia dioxanivorans CB1190 10363165 YP_004331437.1 CDS Psed_1341 NC_015312.1 1401466 1403262 D manually curated; KEGG: sco:SCO5945 transferase; PFAM: Gamma-glutamyltranspeptidase; Gamma-glutamyltransferase 1401466..1403262 Pseudonocardia dioxanivorans CB1190 10363166 YP_004331438.1 CDS Psed_1342 NC_015312.1 1403345 1404133 D KEGG: cwo:Cwoe_2765 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 1403345..1404133 Pseudonocardia dioxanivorans CB1190 10363167 YP_004331439.1 CDS Psed_1343 NC_015312.1 1404279 1406000 D KEGG: tcu:Tcur_0775 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1404279..1406000 Pseudonocardia dioxanivorans CB1190 10363168 YP_004331440.1 CDS Psed_1344 NC_015312.1 1405997 1406926 D PFAM: Crotonase, core; KEGG: pla:Plav_1028 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 1405997..1406926 Pseudonocardia dioxanivorans CB1190 10363169 YP_004331441.1 CDS Psed_1345 NC_015312.1 1406926 1408110 D PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: mva:Mvan_0394 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase 1406926..1408110 Pseudonocardia dioxanivorans CB1190 10363170 YP_004331442.1 CDS Psed_1346 NC_015312.1 1408116 1409225 D KEGG: amd:AMED_3864 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; isovaleryl-CoA dehydrogenase 1408116..1409225 Pseudonocardia dioxanivorans CB1190 10363171 YP_004331443.1 CDS Psed_1347 NC_015312.1 1409293 1410204 D PFAM: cyclase; KEGG: fre:Franean1_2682 cyclase protein; cyclase 1409293..1410204 Pseudonocardia dioxanivorans CB1190 10363172 YP_004331444.1 CDS Psed_1348 NC_015312.1 1410209 1410979 R KEGG: cwo:Cwoe_2765 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(1410209..1410979) Pseudonocardia dioxanivorans CB1190 10363173 YP_004331445.1 CDS Psed_1349 NC_015312.1 1411105 1413537 D KEGG: mmi:MMAR_4757 acyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 1411105..1413537 Pseudonocardia dioxanivorans CB1190 10363174 YP_004331446.1 CDS Psed_1350 NC_015312.1 1413530 1414585 D KEGG: fre:Franean1_4505 luciferase protein; TIGRFAM: Luciferase oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase oxidoreductase, group 1 1413530..1414585 Pseudonocardia dioxanivorans CB1190 10363175 YP_004331447.1 CDS Psed_1351 NC_015312.1 1414621 1415145 R hypothetical protein complement(1414621..1415145) Pseudonocardia dioxanivorans CB1190 10363176 YP_004331448.1 CDS Psed_1352 NC_015312.1 1415142 1416992 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: fri:FraEuI1c_3097 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(1415142..1416992) Pseudonocardia dioxanivorans CB1190 10363177 YP_004331449.1 CDS Psed_1353 NC_015312.1 1416989 1417873 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3096 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(1416989..1417873) Pseudonocardia dioxanivorans CB1190 10363178 YP_004331450.1 CDS Psed_1354 NC_015312.1 1417870 1418811 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL0338 ABC transporter oligopeptide permease; ABC transporter permease complement(1417870..1418811) Pseudonocardia dioxanivorans CB1190 10363179 YP_004331451.1 CDS Psed_1355 NC_015312.1 1418823 1420463 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fal:FRAAL0339 ABC transporter oligopeptide binding protein; ABC transporter substrate-binding protein complement(1418823..1420463) Pseudonocardia dioxanivorans CB1190 10363180 YP_004331452.1 CDS Psed_1356 NC_015312.1 1420832 1421731 D PFAM: Alpha/beta hydrolase fold-1; KEGG: amd:AMED_6949 alpha/beta hydrolase; alpha/beta hydrolase 1420832..1421731 Pseudonocardia dioxanivorans CB1190 10363181 YP_004331453.1 CDS Psed_1357 NC_015312.1 1421878 1422636 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fre:Franean1_4114 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 1421878..1422636 Pseudonocardia dioxanivorans CB1190 10363182 YP_004331454.1 CDS Psed_1358 NC_015312.1 1422689 1423420 R KEGG: cwo:Cwoe_4297 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(1422689..1423420) Pseudonocardia dioxanivorans CB1190 10363183 YP_004331455.1 CDS Psed_1359 NC_015312.1 1423563 1424765 R KEGG: mau:Micau_3966 MoeA domain-containing protein domain I and II; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; SMART: Molybdopterin binding; MoeA domain-containing protein domain I and II complement(1423563..1424765) Pseudonocardia dioxanivorans CB1190 10363184 YP_004331456.1 CDS Psed_1360 NC_015312.1 1424803 1425417 R PFAM: Nitroreductase-like; KEGG: fri:FraEuI1c_5167 nitroreductase; nitroreductase complement(1424803..1425417) Pseudonocardia dioxanivorans CB1190 10363185 YP_004331457.1 CDS Psed_1361 NC_015312.1 1425472 1426389 R KEGG: mav:MAV_3101 oxidoreductase, short chain dehydrogenase/reductase protein; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1425472..1426389) Pseudonocardia dioxanivorans CB1190 10363186 YP_004331458.1 CDS Psed_1362 NC_015312.1 1426583 1426999 R hypothetical protein complement(1426583..1426999) Pseudonocardia dioxanivorans CB1190 10363187 YP_004331459.1 CDS Psed_1363 NC_015312.1 1427073 1428269 R KEGG: nml:Namu_0044 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase complement(1427073..1428269) Pseudonocardia dioxanivorans CB1190 10363188 YP_004331460.1 CDS Psed_1364 NC_015312.1 1428278 1430080 R KEGG: pla:Plav_1165 cyclohexanone monooxygenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; phenylacetone monooxygenase complement(1428278..1430080) Pseudonocardia dioxanivorans CB1190 10363189 YP_004331461.1 CDS Psed_1365 NC_015312.1 1430596 1431873 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; HAMAP: GTP cyclohydrolase II, RibA; 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; Riboflavin biosynthesis protein RibBA; KEGG: amd:AMED_2773 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; GTP cyclohydrolase-2 1430596..1431873 Pseudonocardia dioxanivorans CB1190 10363190 YP_004331462.1 CDS Psed_1366 NC_015312.1 1431990 1433483 D KEGG: mmi:MMAR_0240 monoooxygenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4-hydroxyacetophenone monooxygenase 1431990..1433483 Pseudonocardia dioxanivorans CB1190 10363191 YP_004331463.1 CDS Psed_1367 NC_015312.1 1433577 1434722 D PFAM: Luciferase-like, subgroup; KEGG: mmi:MMAR_0308 monooxygenase; luciferase-like protein 1433577..1434722 Pseudonocardia dioxanivorans CB1190 10363192 YP_004331464.1 CDS Psed_1368 NC_015312.1 1435013 1435864 D PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: fri:FraEuI1c_5596 SMP-30/gluconolaconase/LRE-like region-containing protein; SMP-30/Gluconolaconase/LRE-like region-containing protein 1435013..1435864 Pseudonocardia dioxanivorans CB1190 10363193 YP_004331465.1 CDS Psed_1369 NC_015312.1 1435875 1437176 D PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_0210 luciferase protein; luciferase-like protein 1435875..1437176 Pseudonocardia dioxanivorans CB1190 10363194 YP_004331466.1 CDS Psed_1370 NC_015312.1 1437223 1438254 D manually curated; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; KEGG: mrb:Mrub_0282 LacI family transcriptional regulator; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 1437223..1438254 Pseudonocardia dioxanivorans CB1190 10363195 YP_004331467.1 CDS Psed_1371 NC_015312.1 1438285 1439232 R TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: mab:MAB_0995 hypothetical protein; F420-dependent oxidoreductase complement(1438285..1439232) Pseudonocardia dioxanivorans CB1190 10363196 YP_004331468.1 CDS Psed_1372 NC_015312.1 1439518 1440111 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rer:RER_50580 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1439518..1440111) Pseudonocardia dioxanivorans CB1190 10363197 YP_004331469.1 CDS Psed_1373 NC_015312.1 1440496 1441605 D hypothetical protein 1440496..1441605 Pseudonocardia dioxanivorans CB1190 10363198 YP_004331470.1 CDS Psed_1374 NC_015312.1 1441617 1443797 D PFAM: Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; KEGG: rop:ROP_17970 oxidoreductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; nitrate reductase 1441617..1443797 Pseudonocardia dioxanivorans CB1190 10363199 YP_004331471.1 CDS Psed_1375 NC_015312.1 1443808 1444995 D KEGG: fre:Franean1_6244 epocide hydrolase domain-containing protein; PFAM: Epoxide hydrolase, N-terminal; Alpha/beta hydrolase fold-1; microsomal epoxide hydrolase 1443808..1444995 Pseudonocardia dioxanivorans CB1190 10363200 YP_004331472.1 CDS Psed_1376 NC_015312.1 1445488 1446765 D KEGG: fra:Francci3_0380 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; hypothetical protein 1445488..1446765 Pseudonocardia dioxanivorans CB1190 10363201 YP_004331473.1 CDS Psed_1377 NC_015312.1 1446894 1449716 D PFAM: ABC transporter-like; ABC transporter permease; KEGG: amd:AMED_7155 fused ATPase and permease components of ABC-type branched-chain amino acid transport system; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 1446894..1449716 Pseudonocardia dioxanivorans CB1190 10363202 YP_004331474.1 CDS Psed_1378 NC_015312.1 1449716 1450498 D KEGG: fal:FRAAL5036 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1449716..1450498 Pseudonocardia dioxanivorans CB1190 10363203 YP_004331475.1 CDS Psed_1379 NC_015312.1 1450577 1451491 D KEGG: mmi:MMAR_1575 oxidoreductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 1450577..1451491 Pseudonocardia dioxanivorans CB1190 10363204 YP_004331476.1 CDS Psed_1380 NC_015312.1 1451541 1452830 D PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: sth:STH2357 acyl-CoA dehydrogenase, short-chain specific; acyl-CoA dehydrogenase 1451541..1452830 Pseudonocardia dioxanivorans CB1190 10363205 YP_004331477.1 CDS Psed_1382 NC_015312.1 1453876 1454292 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: mav:MAV_5258 hypothetical protein; hypothetical protein 1453876..1454292 Pseudonocardia dioxanivorans CB1190 10363207 YP_004331478.1 CDS Psed_1383 NC_015312.1 1454289 1455419 D KEGG: mpa:MAP4297c hypothetical protein; hypothetical protein 1454289..1455419 Pseudonocardia dioxanivorans CB1190 10363208 YP_004331479.1 CDS Psed_1384 NC_015312.1 1455547 1457142 R KEGG: msm:MSMEG_0526 oxidoreductase, GMC family protein; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; choline dehydrogenase complement(1455547..1457142) Pseudonocardia dioxanivorans CB1190 10363209 YP_004331480.1 CDS Psed_1385 NC_015312.1 1457601 1459061 D PFAM: Aldehyde dehydrogenase domain; KEGG: tcu:Tcur_2494 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 1457601..1459061 Pseudonocardia dioxanivorans CB1190 10363210 YP_004331481.1 CDS Psed_1388 NC_015312.1 1460828 1461226 D KEGG: aau:AAur_pTC20119 hypothetical protein; hypothetical protein 1460828..1461226 Pseudonocardia dioxanivorans CB1190 10363213 YP_004331482.1 CDS Psed_1389 NC_015312.1 1461223 1461885 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1461223..1461885 Pseudonocardia dioxanivorans CB1190 10363214 YP_004331483.1 CDS Psed_1390 NC_015312.1 1461909 1463507 R PFAM: Major facilitator superfamily MFS-1; KEGG: sgr:SGR_550 major facilitator superfamily permease; major facilitator superfamily protein complement(1461909..1463507) Pseudonocardia dioxanivorans CB1190 10363215 YP_004331484.1 CDS Psed_1391 NC_015312.1 1463699 1465192 R PFAM: Major facilitator superfamily MFS-1; KEGG: scb:SCAB_1721 transmembrane transport protein; major facilitator superfamily protein complement(1463699..1465192) Pseudonocardia dioxanivorans CB1190 10363216 YP_004331485.1 CDS Psed_1392 NC_015312.1 1465189 1465605 R KEGG: axy:AXYL_04232 cupin domain-containing protein 5; cupin complement(1465189..1465605) Pseudonocardia dioxanivorans CB1190 10363217 YP_004331486.1 CDS Psed_1393 NC_015312.1 1465689 1466366 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: scb:SCAB_1731 TetR family regulator; TetR family transcriptional regulator 1465689..1466366 Pseudonocardia dioxanivorans CB1190 10363218 YP_004331487.1 CDS Psed_1394 NC_015312.1 1466374 1467477 R PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit complement(1466374..1467477) Pseudonocardia dioxanivorans CB1190 10363219 YP_004331488.1 CDS Psed_1395 NC_015312.1 1467552 1469306 R TIGRFAM: CocE/NonD hydrolase; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S9/S15; KEGG: rxy:Rxyl_2383 peptidase S15; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein complement(1467552..1469306) Pseudonocardia dioxanivorans CB1190 10363220 YP_004331489.1 CDS Psed_1396 NC_015312.1 1469459 1470214 D PFAM: Alpha/beta hydrolase fold-1; KEGG: mxa:MXAN_0158 alpha/beta fold family hydrolase; alpha/beta hydrolase 1469459..1470214 Pseudonocardia dioxanivorans CB1190 10363221 YP_004331490.1 CDS Psed_1397 NC_015312.1 1470467 1472059 D PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; Alpha/beta hydrolase fold-1; KEGG: sen:SACE_1611 exported protease; TAP domain-containing protein 1470467..1472059 Pseudonocardia dioxanivorans CB1190 10363222 YP_004331491.1 CDS Psed_1398 NC_015312.1 1472134 1473243 D PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 1472134..1473243 Pseudonocardia dioxanivorans CB1190 10363223 YP_004331492.1 CDS Psed_1399 NC_015312.1 1473606 1474247 D KEGG: spu:373354 histone H1-beta; hypothetical protein 1473606..1474247 Pseudonocardia dioxanivorans CB1190 10363224 YP_004331493.1 CDS Psed_1400 NC_015312.1 1474251 1474718 D hypothetical protein 1474251..1474718 Pseudonocardia dioxanivorans CB1190 10363225 YP_004331494.1 CDS Psed_1401 NC_015312.1 1474814 1475557 R KEGG: gob:Gobs_3806 threonyl/alanyl tRNA synthetase SAD; PFAM: Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA synthetase, class IIc, N-terminal; SMART: Threonyl/alanyl tRNA synthetase, SAD; tjhreonyl/alanyl tRNA synthetase SAD complement(1474814..1475557) Pseudonocardia dioxanivorans CB1190 10363226 YP_004331495.1 CDS Psed_1402 NC_015312.1 1475689 1476384 D PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: stp:Strop_2558 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 1475689..1476384 Pseudonocardia dioxanivorans CB1190 10363227 YP_004331496.1 CDS Psed_1403 NC_015312.1 1476263 1477021 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tcu:Tcur_2744 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(1476263..1477021) Pseudonocardia dioxanivorans CB1190 10363228 YP_004331497.1 CDS Psed_1404 NC_015312.1 1477255 1478241 D PFAM: FAD dependent oxidoreductase; KEGG: tcu:Tcur_2745 dehydrogenase; FAD dependent oxidoreductase 1477255..1478241 Pseudonocardia dioxanivorans CB1190 10363229 YP_004331498.1 CDS Psed_1405 NC_015312.1 1478244 1478642 D KEGG: mil:ML5_4784 6-pyruvoyl tetrahydropterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 1478244..1478642 Pseudonocardia dioxanivorans CB1190 10363230 YP_004331499.1 CDS Psed_1406 NC_015312.1 1478632 1479714 D PFAM: Glycosyl transferase, group 1; KEGG: sma:SAV_1795 glycosyl transferase; group 1 glycosyl transferase 1478632..1479714 Pseudonocardia dioxanivorans CB1190 10363231 YP_004331500.1 CDS Psed_1407 NC_015312.1 1479711 1480685 D KEGG: tcu:Tcur_2749 hypothetical protein; hypothetical protein 1479711..1480685 Pseudonocardia dioxanivorans CB1190 10363232 YP_004331501.1 CDS Psed_1408 NC_015312.1 1480682 1482301 D PFAM: Sulfatase; KEGG: mil:ML5_1364 sulfatase; sulfatase 1480682..1482301 Pseudonocardia dioxanivorans CB1190 10363233 YP_004331502.1 CDS Psed_1409 NC_015312.1 1482289 1482789 R KEGG: rer:RER_50600 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(1482289..1482789) Pseudonocardia dioxanivorans CB1190 10363234 YP_004331503.1 CDS Psed_1410 NC_015312.1 1482918 1484081 D TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: req:REQ_44720 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 1482918..1484081 Pseudonocardia dioxanivorans CB1190 10363235 YP_004331504.1 CDS Psed_1412 NC_015312.1 1484510 1486147 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_4222 extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1484510..1486147) Pseudonocardia dioxanivorans CB1190 10363237 YP_004331505.1 CDS Psed_1413 NC_015312.1 1486234 1486767 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mau:Micau_1726 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1486234..1486767) Pseudonocardia dioxanivorans CB1190 10363238 YP_004331506.1 CDS Psed_1414 NC_015312.1 1486772 1488118 R KEGG: reu:Reut_B5781 Rieske (2Fe-2S) region; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase complement(1486772..1488118) Pseudonocardia dioxanivorans CB1190 10363239 YP_004331507.1 CDS Psed_1415 NC_015312.1 1488338 1489273 D PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: sco:SCO6309 LysR family transcriptional regulator; LysR family transcriptional regulator 1488338..1489273 Pseudonocardia dioxanivorans CB1190 10363240 YP_004331508.1 CDS Psed_1416 NC_015312.1 1489325 1490962 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sti:Sthe_0680 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein complement(1489325..1490962) Pseudonocardia dioxanivorans CB1190 10363241 YP_004331509.1 CDS Psed_1417 NC_015312.1 1491331 1492209 R KEGG: lch:Lcho_3754 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase; phosphoribulokinase complement(1491331..1492209) Pseudonocardia dioxanivorans CB1190 10363242 YP_004331510.1 CDS Psed_1418 NC_015312.1 1492223 1493296 R HAMAP: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; KEGG: cti:RALTA_B1696 fructose 1,6-bisphosphatase (RuBisCO operon); PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; fructose-1,6-bisphosphatase class 1 complement(1492223..1493296) Pseudonocardia dioxanivorans CB1190 10363243 YP_004331511.1 CDS Psed_1419 NC_015312.1 1493530 1494786 D PFAM: Amidase; KEGG: rha:RHA1_ro02850 indoleacetamide hydrolase; amidase 1493530..1494786 Pseudonocardia dioxanivorans CB1190 10363244 YP_004331512.1 CDS Psed_1420 NC_015312.1 1494864 1495511 R KEGG: fra:Francci3_1236 hypothetical protein; hypothetical protein complement(1494864..1495511) Pseudonocardia dioxanivorans CB1190 10363245 YP_004331513.1 CDS Psed_1421 NC_015312.1 1495702 1496127 R PFAM: Ferric-uptake regulator; KEGG: stp:Strop_2053 ferric-uptake regulator; Fur family ferric uptake regulator complement(1495702..1496127) Pseudonocardia dioxanivorans CB1190 10363246 YP_004331514.1 CDS Psed_1422 NC_015312.1 1496100 1496540 R PFAM: Ferritin/Dps protein; KEGG: nfa:nfa13000 hypothetical protein; ferritin complement(1496100..1496540) Pseudonocardia dioxanivorans CB1190 10363247 YP_004331515.1 CDS Psed_1423 NC_015312.1 1496650 1497264 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: kra:Krad_4434 transcriptional regulator; TetR family transcriptional regulator complement(1496650..1497264) Pseudonocardia dioxanivorans CB1190 10363248 YP_004331516.1 CDS Psed_1424 NC_015312.1 1497338 1498585 D PFAM: Major facilitator superfamily MFS-1; KEGG: rop:ROP_50640 MFS transporter; major facilitator superfamily protein 1497338..1498585 Pseudonocardia dioxanivorans CB1190 10363249 YP_004331517.1 CDS Psed_1425 NC_015312.1 1498602 1498871 D KEGG: ace:Acel_0486 hypothetical protein; HAMAP: Protein of unknown function DUF167; PFAM: Protein of unknown function DUF167; hypothetical protein 1498602..1498871 Pseudonocardia dioxanivorans CB1190 10363250 YP_004331518.1 CDS Psed_1426 NC_015312.1 1498890 1499684 R KEGG: fal:FRAAL1747 hypothetical protein; hypothetical protein complement(1498890..1499684) Pseudonocardia dioxanivorans CB1190 10363251 YP_004331519.1 CDS Psed_1427 NC_015312.1 1499819 1500352 R hypothetical protein complement(1499819..1500352) Pseudonocardia dioxanivorans CB1190 10363252 YP_004331520.1 CDS Psed_1428 NC_015312.1 1500349 1501137 R KEGG: cre:CHLREDRAFT_205991 secreted protease and protease inhibitor; hypothetical protein complement(1500349..1501137) Pseudonocardia dioxanivorans CB1190 10363253 YP_004331521.1 CDS Psed_1429 NC_015312.1 1501438 1502298 D PFAM: Uncharacterised protein family UPF0145; KEGG: cai:Caci_1282 hypothetical protein; hypothetical protein 1501438..1502298 Pseudonocardia dioxanivorans CB1190 10363254 YP_004331522.1 CDS Psed_1430 NC_015312.1 1502340 1503173 D PFAM: Uncharacterised protein family UPF0145; KEGG: cai:Caci_1283 protein of unknown function DUF74; hypothetical protein 1502340..1503173 Pseudonocardia dioxanivorans CB1190 10363255 YP_004331523.1 CDS Psed_1431 NC_015312.1 1503224 1503622 D KEGG: amd:AMED_1338 hypothetical protein; hypothetical protein 1503224..1503622 Pseudonocardia dioxanivorans CB1190 10363256 YP_004331524.1 CDS Psed_1432 NC_015312.1 1503635 1504600 R KEGG: abc:ACICU_01880 AraC-type DNA-binding domain-containing protein; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(1503635..1504600) Pseudonocardia dioxanivorans CB1190 10363257 YP_004331525.1 CDS Psed_1433 NC_015312.1 1504994 1506016 D PFAM: ThiJ/PfpI; KEGG: cai:Caci_1157 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 1504994..1506016 Pseudonocardia dioxanivorans CB1190 10363258 YP_004331526.1 CDS Psed_1434 NC_015312.1 1506018 1506449 D PFAM: Protein of unknown function DUF1486; KEGG: reh:H16_B1338 hypothetical protein; hypothetical protein 1506018..1506449 Pseudonocardia dioxanivorans CB1190 10363259 YP_004331527.1 CDS Psed_1435 NC_015312.1 1506462 1506962 D PFAM: Protein of unknown function DUF1486; KEGG: bur:Bcep18194_B3047 hypothetical protein; hypothetical protein 1506462..1506962 Pseudonocardia dioxanivorans CB1190 10363260 YP_004331528.1 CDS Psed_1436 NC_015312.1 1506979 1508505 D PFAM: Methane/phenol/toluene hydroxylase; KEGG: rme:Rmet_1316 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 1506979..1508505 Pseudonocardia dioxanivorans CB1190 10363261 YP_004331529.1 CDS Psed_1437 NC_015312.1 1508502 1508780 D PFAM: Toluene-4-monooxygenase system B; KEGG: fra:Francci3_0212 toluene-4-monooxygenase system B; Toluene-4-monooxygenase system B 1508502..1508780 Pseudonocardia dioxanivorans CB1190 10363262 YP_004331530.1 CDS Psed_1438 NC_015312.1 1508794 1509111 D PFAM: Monooxygenase component MmoB/DmpM; KEGG: bbt:BBta_1595 toluene-4-monooxygenase system protein D; monooxygenase component MmoB/DmpM 1508794..1509111 Pseudonocardia dioxanivorans CB1190 10363263 YP_004331531.1 CDS Psed_1439 NC_015312.1 1509108 1510115 D PFAM: Methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5675 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 1509108..1510115 Pseudonocardia dioxanivorans CB1190 10363264 YP_004331532.1 CDS Psed_1440 NC_015312.1 1510288 1510644 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bts:Btus_2067 Rieske (2Fe-2S) iron-sulfur domain protein; Rieske (2Fe-2S) domain-containing protein 1510288..1510644 Pseudonocardia dioxanivorans CB1190 10363265 YP_004331533.1 CDS Psed_1441 NC_015312.1 1510648 1511880 D KEGG: nca:Noca_4282 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 1510648..1511880 Pseudonocardia dioxanivorans CB1190 10363266 YP_004331534.1 CDS Psed_1442 NC_015312.1 1511877 1512254 D PFAM: Ribosomal protein L22/L17; KEGG: sgr:SGR_2829 50S ribosomal protein L22; 50S ribosomal protein L22 1511877..1512254 Pseudonocardia dioxanivorans CB1190 10363267 YP_004331535.1 CDS Psed_1443 NC_015312.1 1512285 1512614 D PFAM: Domain of unknown function DUF59; KEGG: tpr:Tpau_2504 protein of unknown function DUF59; hypothetical protein 1512285..1512614 Pseudonocardia dioxanivorans CB1190 10363268 YP_004331536.1 CDS Psed_1444 NC_015312.1 1512626 1512922 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nca:Noca_1187 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1512626..1512922 Pseudonocardia dioxanivorans CB1190 10363269 YP_004331537.1 CDS Psed_1445 NC_015312.1 1512932 1513156 R KEGG: kfl:Kfla_5298 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator complement(1512932..1513156) Pseudonocardia dioxanivorans CB1190 10363270 YP_004331538.1 CDS Psed_1446 NC_015312.1 1513169 1513648 R KEGG: amd:AMED_7526 integral membrane protein; hypothetical protein complement(1513169..1513648) Pseudonocardia dioxanivorans CB1190 10363271 YP_004331539.1 CDS Psed_1447 NC_015312.1 1513703 1514854 R PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; KEGG: fri:FraEuI1c_3679 phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; phosphoribosylaminoimidazolecarboxamide formyltransferase complement(1513703..1514854) Pseudonocardia dioxanivorans CB1190 10363272 YP_004331540.1 CDS Psed_1448 NC_015312.1 1514986 1516641 R PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: kfl:Kfla_0918 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(1514986..1516641) Pseudonocardia dioxanivorans CB1190 10363273 YP_004331541.1 CDS Psed_1449 NC_015312.1 1516847 1518583 D KEGG: rfr:Rfer_2478 thiamine pyrophosphate enzyme-like TPP binding protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase 1516847..1518583 Pseudonocardia dioxanivorans CB1190 10363274 YP_004331542.1 CDS Psed_1450 NC_015312.1 1518621 1519037 R KEGG: aau:AAur_pTC20145 nitrile hydratase b-subunit; nitrile hydratase b-subunit complement(1518621..1519037) Pseudonocardia dioxanivorans CB1190 10363275 YP_004331543.1 CDS Psed_1451 NC_015312.1 1519034 1519663 R TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha complement(1519034..1519663) Pseudonocardia dioxanivorans CB1190 10363276 YP_004331544.1 CDS Psed_1452 NC_015312.1 1519660 1520364 R KEGG: aau:AAur_pTC20147 cobalt-containing nitrile hydratase beta subunit; nitrile hydratase complement(1519660..1520364) Pseudonocardia dioxanivorans CB1190 10363277 YP_004331545.1 CDS Psed_1453 NC_015312.1 1520361 1521908 R PFAM: Amidase; KEGG: gob:Gobs_0303 amidase; amidase complement(1520361..1521908) Pseudonocardia dioxanivorans CB1190 10363278 YP_004331546.1 CDS Psed_1454 NC_015312.1 1522031 1522420 R KEGG: nfa:nfa48290 hypothetical protein; hypothetical protein complement(1522031..1522420) Pseudonocardia dioxanivorans CB1190 10363279 YP_004331547.1 CDS Psed_1455 NC_015312.1 1522606 1523865 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mjl:Mjls_1024 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1522606..1523865) Pseudonocardia dioxanivorans CB1190 10363280 YP_004331548.1 CDS Psed_1456 NC_015312.1 1523862 1524404 R KEGG: amd:AMED_0110 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1523862..1524404) Pseudonocardia dioxanivorans CB1190 10363281 YP_004331549.1 CDS Psed_1457 NC_015312.1 1524462 1525514 R PFAM: Alpha/beta hydrolase fold-1; KEGG: msv:Mesil_2128 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(1524462..1525514) Pseudonocardia dioxanivorans CB1190 10363282 YP_004331550.1 CDS Psed_1458 NC_015312.1 1525696 1526379 R KEGG: rlt:Rleg2_6079 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1525696..1526379) Pseudonocardia dioxanivorans CB1190 10363283 YP_004331551.1 CDS Psed_1459 NC_015312.1 1526376 1527218 R KEGG: sti:Sthe_2868 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1526376..1527218) Pseudonocardia dioxanivorans CB1190 10363284 YP_004331552.1 CDS Psed_1460 NC_015312.1 1527247 1527750 R KEGG: rxy:Rxyl_0111 (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(1527247..1527750) Pseudonocardia dioxanivorans CB1190 10363285 YP_004331553.1 CDS Psed_1461 NC_015312.1 1527752 1530076 R KEGG: tcu:Tcur_4235 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(1527752..1530076) Pseudonocardia dioxanivorans CB1190 10363286 YP_004331554.1 CDS Psed_1462 NC_015312.1 1530238 1530720 R KEGG: sco:SCO1119 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(1530238..1530720) Pseudonocardia dioxanivorans CB1190 10363287 YP_004331555.1 CDS Psed_1463 NC_015312.1 1530856 1534293 D KEGG: amd:AMED_5858 indolepyruvate ferredoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; indolepyruvate ferredoxin oxidoreductase 1530856..1534293 Pseudonocardia dioxanivorans CB1190 10363288 YP_004331556.1 CDS Psed_1464 NC_015312.1 1534378 1535811 D PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: mes:Meso_0482 fumarate reductase/succinate dehydrogenase flavoprotein-like; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1534378..1535811 Pseudonocardia dioxanivorans CB1190 10363289 YP_004331557.1 CDS Psed_1465 NC_015312.1 1535843 1537006 R KEGG: nml:Namu_2913 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(1535843..1537006) Pseudonocardia dioxanivorans CB1190 10363290 YP_004331558.1 CDS Psed_1466 NC_015312.1 1537118 1537528 D PFAM: Endoribonuclease L-PSP; KEGG: nml:Namu_2914 endoribonuclease L-PSP; endoribonuclease L-PSP 1537118..1537528 Pseudonocardia dioxanivorans CB1190 10363291 YP_004331559.1 CDS Psed_1467 NC_015312.1 1537555 1538916 D PFAM: FAD linked oxidase, N-terminal; KEGG: nml:Namu_2915 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 1537555..1538916 Pseudonocardia dioxanivorans CB1190 10363292 YP_004331560.1 CDS Psed_1468 NC_015312.1 1538933 1539352 R PFAM: Cupin 2, conserved barrel; KEGG: fri:FraEuI1c_3948 hypothetical protein; cupin complement(1538933..1539352) Pseudonocardia dioxanivorans CB1190 10363293 YP_004331561.1 CDS Psed_1469 NC_015312.1 1539474 1539938 R KEGG: fri:FraEuI1c_3435 hypothetical protein; hypothetical protein complement(1539474..1539938) Pseudonocardia dioxanivorans CB1190 10363294 YP_004331562.1 CDS Psed_1470 NC_015312.1 1539944 1540957 R PFAM: Luciferase-like, subgroup; KEGG: kfl:Kfla_3971 luciferase-like monooxygenase; luciferase-like protein complement(1539944..1540957) Pseudonocardia dioxanivorans CB1190 10363295 YP_004331563.1 CDS Psed_1471 NC_015312.1 1540954 1541340 R PFAM: Limonene-1,2-epoxide hydrolase; KEGG: rop:ROP_24950 hypothetical protein; limonene-12-epoxide hydrolase complement(1540954..1541340) Pseudonocardia dioxanivorans CB1190 10363296 YP_004331564.1 CDS Psed_1472 NC_015312.1 1541337 1542542 R PFAM: Cytochrome P450; KEGG: jan:Jann_2272 cytochrome P450-like; cytochrome P450 complement(1541337..1542542) Pseudonocardia dioxanivorans CB1190 10363297 YP_004331565.1 CDS Psed_1473 NC_015312.1 1542645 1543574 D KEGG: fra:Francci3_2659 luciferase-like protein; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG2516, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 1542645..1543574 Pseudonocardia dioxanivorans CB1190 10363298 YP_004331566.1 CDS Psed_1474 NC_015312.1 1543779 1545251 D KEGG: ccu:Ccur_13640 flavocytochrome c; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; succinate dehydrogenase 1543779..1545251 Pseudonocardia dioxanivorans CB1190 10363299 YP_004331567.1 CDS Psed_1475 NC_015312.1 1545308 1546336 D PFAM: Luciferase-like, subgroup; KEGG: tcu:Tcur_2704 luciferase-like monooxygenase; luciferase-like protein 1545308..1546336 Pseudonocardia dioxanivorans CB1190 10363300 YP_004331568.1 CDS Psed_1476 NC_015312.1 1546333 1547391 D PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: swi:Swit_0294 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 1546333..1547391 Pseudonocardia dioxanivorans CB1190 10363301 YP_004331569.1 CDS Psed_1477 NC_015312.1 1547388 1548611 D PFAM: Cytochrome P450; KEGG: jan:Jann_2272 cytochrome P450-like; cytochrome P450 1547388..1548611 Pseudonocardia dioxanivorans CB1190 10363302 YP_004331570.1 CDS Psed_1478 NC_015312.1 1548619 1548843 D PFAM: Ferredoxin soy-like; KEGG: sgr:SGR_263 ferredoxin; hypothetical protein 1548619..1548843 Pseudonocardia dioxanivorans CB1190 10363303 YP_004331571.1 CDS Psed_1479 NC_015312.1 1548944 1549699 D KEGG: tcu:Tcur_3385 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1548944..1549699 Pseudonocardia dioxanivorans CB1190 10363304 YP_004331572.1 CDS Psed_1480 NC_015312.1 1549751 1550389 R KEGG: rha:RHA1_ro00299 hypothetical protein; TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, HD subdomain; metal dependent phosphohydrolase complement(1549751..1550389) Pseudonocardia dioxanivorans CB1190 10363305 YP_004331573.1 CDS Psed_1481 NC_015312.1 1550515 1551525 R KEGG: sco:SCO0466 AraC family transcription regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(1550515..1551525) Pseudonocardia dioxanivorans CB1190 10363306 YP_004331574.1 CDS Psed_1482 NC_015312.1 1551632 1552630 R KEGG: jan:Jann_2274 amidohydrolase 2; PFAM: Amidohydrolase 2; aminocarboxymuconate-semialdehyde decarboxylase complement(1551632..1552630) Pseudonocardia dioxanivorans CB1190 10363307 YP_004331575.1 CDS Psed_1483 NC_015312.1 1552623 1553984 R PFAM: Amidohydrolase 1; KEGG: jan:Jann_2275 amidohydrolase; amidohydrolase complement(1552623..1553984) Pseudonocardia dioxanivorans CB1190 10363308 YP_004331576.1 CDS Psed_1484 NC_015312.1 1554278 1555054 D KEGG: jan:Jann_2271 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1554278..1555054 Pseudonocardia dioxanivorans CB1190 10363309 YP_004331577.1 CDS Psed_1485 NC_015312.1 1555114 1556013 D PFAM: Transcription regulator TrmB, N-terminal; KEGG: sro:Sros_2039 helix-turn-helix family DUF118; transcriptional regulator TrmB 1555114..1556013 Pseudonocardia dioxanivorans CB1190 10363310 YP_004331578.1 CDS Psed_1486 NC_015312.1 1556177 1557424 R PFAM: Major facilitator superfamily MFS-1; KEGG: rxy:Rxyl_2414 major facilitator transporter; major facilitator superfamily protein complement(1556177..1557424) Pseudonocardia dioxanivorans CB1190 10363311 YP_004331579.1 CDS Psed_1487 NC_015312.1 1557428 1558129 R KEGG: jan:Jann_2270 hypothetical protein; hypothetical protein complement(1557428..1558129) Pseudonocardia dioxanivorans CB1190 10363312 YP_004331580.1 CDS Psed_1488 NC_015312.1 1558376 1559050 D KEGG: rha:RHA1_ro02179 hypothetical protein; hypothetical protein 1558376..1559050 Pseudonocardia dioxanivorans CB1190 10363313 YP_004331581.1 CDS Psed_1489 NC_015312.1 1559550 1560962 R TIGRFAM: Benzoyl-CoA oxygenase, B subunit; KEGG: amd:AMED_8610 benzoyl-CoA oxygenase component B; benzoyl-CoA oxygenase subunit B complement(1559550..1560962) Pseudonocardia dioxanivorans CB1190 10363314 YP_004331582.1 CDS Psed_1490 NC_015312.1 1560972 1562729 R KEGG: amd:AMED_8611 enoyl-CoA hydratase; TIGRFAM: Benzoyl-CoA-dihydrodiol lyase; PFAM: Crotonase, core; benzoyl-CoA-dihydrodiol lyase complement(1560972..1562729) Pseudonocardia dioxanivorans CB1190 10363315 YP_004331583.1 CDS Psed_1491 NC_015312.1 1562819 1564417 R TIGRFAM: Benzoate-CoA ligase; KEGG: amd:AMED_8609 benzoate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; benzoate-CoA ligase complement(1562819..1564417) Pseudonocardia dioxanivorans CB1190 10363316 YP_004331584.1 CDS Psed_1492 NC_015312.1 1564650 1565771 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: gbr:Gbro_3823 alcohol dehydrogenase GroES domain-containing protein; alcohol dehydrogenase 1564650..1565771 Pseudonocardia dioxanivorans CB1190 10363317 YP_004331585.1 CDS Psed_1493 NC_015312.1 1565845 1567785 D KEGG: sti:Sthe_2861 ATPase associated with various cellular activities AAA_5; PFAM: ATPase, AAA-5; vWA containing CoxE-like; SMART: ATPase, AAA+ type, core; ATPase 1565845..1567785 Pseudonocardia dioxanivorans CB1190 10363318 YP_004331586.1 CDS Psed_1494 NC_015312.1 1567944 1568753 D PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: amd:AMED_7014 LmbE family protein; LmbE family protein 1567944..1568753 Pseudonocardia dioxanivorans CB1190 10363319 YP_004331587.1 CDS Psed_1495 NC_015312.1 1568954 1570708 D KEGG: amd:AMED_7729 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 1568954..1570708 Pseudonocardia dioxanivorans CB1190 10363320 YP_004331588.1 CDS Psed_1496 NC_015312.1 1570740 1572002 D TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: sen:SACE_1188 phosphoserine phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; Amino acid-binding ACT; phosphoserine phosphatase SerB 1570740..1572002 Pseudonocardia dioxanivorans CB1190 10363321 YP_004331589.1 CDS Psed_1497 NC_015312.1 1571999 1572700 D KEGG: amd:AMED_7727 hypothetical protein; hypothetical protein 1571999..1572700 Pseudonocardia dioxanivorans CB1190 10363322 YP_004331590.1 CDS Psed_1498 NC_015312.1 1572716 1573060 R KEGG: msp:Mspyr1_51770 hypothetical protein; hypothetical protein complement(1572716..1573060) Pseudonocardia dioxanivorans CB1190 10363323 YP_004331591.1 CDS Psed_1499 NC_015312.1 1573060 1573692 R TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: msp:Mspyr1_51780 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha complement(1573060..1573692) Pseudonocardia dioxanivorans CB1190 10363324 YP_004331592.1 CDS Psed_1500 NC_015312.1 1573689 1574444 R KEGG: msm:MSMEG_0377 nitrile hydratase; nitrile hydratase complement(1573689..1574444) Pseudonocardia dioxanivorans CB1190 10363325 YP_004331593.1 CDS Psed_1501 NC_015312.1 1574652 1575593 D KEGG: mva:Mvan_5828 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 1574652..1575593 Pseudonocardia dioxanivorans CB1190 10363326 YP_004331594.1 CDS Psed_1502 NC_015312.1 1575756 1577792 R SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: ami:Amir_0995 helicase C2; helicase c2 complement(1575756..1577792) Pseudonocardia dioxanivorans CB1190 10363327 YP_004331595.1 CDS Psed_1503 NC_015312.1 1577987 1578874 D KEGG: fri:FraEuI1c_5196 thioesterase superfamily protein; hypothetical protein 1577987..1578874 Pseudonocardia dioxanivorans CB1190 10363328 YP_004331596.1 CDS Psed_1504 NC_015312.1 1578973 1579521 R PFAM: Isochorismatase-like; KEGG: ami:Amir_1003 isochorismatase hydrolase; isochorismatase hydrolase complement(1578973..1579521) Pseudonocardia dioxanivorans CB1190 10363329 YP_004331597.1 CDS Psed_1505 NC_015312.1 1579523 1580830 R TIGRFAM: Nicotinate phosphoribosyltransferase KEGG: svi:Svir_29240 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase complement(1579523..1580830) Pseudonocardia dioxanivorans CB1190 10363330 YP_004331598.1 CDS Psed_1506 NC_015312.1 1580887 1581183 D KEGG: ami:Amir_1005 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adaptor protein ClpS; PFAM: Adaptor protein ClpS, core; ATP-dependent Clp protease adapter protein clpS 1580887..1581183 Pseudonocardia dioxanivorans CB1190 10363331 YP_004331599.1 CDS Psed_1507 NC_015312.1 1581197 1581754 D PFAM: Domain of unknown function DUF2017; KEGG: svi:Svir_29220 protein of unknown function (DUF2017); hypothetical protein 1581197..1581754 Pseudonocardia dioxanivorans CB1190 10363332 YP_004331600.1 CDS Psed_1508 NC_015312.1 1581751 1582056 R TIGRFAM: Selenoprotein, Rdx type; KEGG: rha:RHA1_ro05355 hypothetical protein; selT/selW/selH selenoprotein domain-containing protein complement(1581751..1582056) Pseudonocardia dioxanivorans CB1190 10363333 YP_004331601.1 CDS Psed_1509 NC_015312.1 1582143 1582616 D KEGG: gob:Gobs_1356 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; Mov34/MPN/PAD-1 family protein 1582143..1582616 Pseudonocardia dioxanivorans CB1190 10363334 YP_004331602.1 CDS Psed_1510 NC_015312.1 1582685 1582960 D PFAM: ThiamineS; KEGG: tpr:Tpau_1290 thiamineS protein; sulfur carrier protein ThiS 1582685..1582960 Pseudonocardia dioxanivorans CB1190 10363335 YP_004331603.1 CDS Psed_1511 NC_015312.1 1583067 1584017 D TIGRFAM: Cysteine synthase K/M; KEGG: sen:SACE_1206 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase 1583067..1584017 Pseudonocardia dioxanivorans CB1190 10363336 YP_004331604.1 CDS Psed_1512 NC_015312.1 1584222 1584794 D PFAM: Peptidase S54, rhomboid domain; KEGG: amd:AMED_7707 hypothetical protein; peptidase S54, rhomboid domain-containing protein 1584222..1584794 Pseudonocardia dioxanivorans CB1190 10363337 YP_004331605.1 CDS Psed_1513 NC_015312.1 1584791 1585618 D PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: mbo:Mb1373 glutamate racemase; glutamate racemase 1584791..1585618 Pseudonocardia dioxanivorans CB1190 10363338 YP_004331606.1 CDS Psed_1514 NC_015312.1 1585643 1586527 R KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein complement(1585643..1586527) Pseudonocardia dioxanivorans CB1190 10363339 YP_004331607.1 CDS Psed_1515 NC_015312.1 1586983 1587351 D KEGG: gob:Gobs_5030 integral membrane protein; integral membrane protein 1586983..1587351 Pseudonocardia dioxanivorans CB1190 10363340 YP_004331608.1 CDS Psed_1516 NC_015312.1 1587464 1587823 D KEGG: kra:Krad_0154 integral membrane protein; integral membrane protein 1587464..1587823 Pseudonocardia dioxanivorans CB1190 10363341 YP_004331609.1 CDS Psed_1517 NC_015312.1 1587848 1588636 D KEGG: sen:SACE_1210 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 1587848..1588636 Pseudonocardia dioxanivorans CB1190 10363342 YP_004331610.1 CDS Psed_1518 NC_015312.1 1588787 1589383 R KEGG: ami:Amir_1019 hypothetical protein; hypothetical protein complement(1588787..1589383) Pseudonocardia dioxanivorans CB1190 10363343 YP_004331611.1 CDS Psed_1519 NC_015312.1 1589454 1590209 D KEGG: sen:SACE_1212 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type; Ribonuclease PH 1589454..1590209 Pseudonocardia dioxanivorans CB1190 10363344 YP_004331612.1 CDS Psed_1520 NC_015312.1 1590206 1590820 D PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase; KEGG: sen:SACE_1213 Ham1-like protein; nucleoside-triphosphatase rdgB 1590206..1590820 Pseudonocardia dioxanivorans CB1190 10363345 YP_004331613.1 CDS Psed_1521 NC_015312.1 1590982 1591386 R PFAM: Carboxymuconolactone decarboxylase; KEGG: tcu:Tcur_3347 3-oxoadipate enol-lactonase; carboxymuconolactone decarboxylase complement(1590982..1591386) Pseudonocardia dioxanivorans CB1190 10363346 YP_004331614.1 CDS Psed_1522 NC_015312.1 1591516 1592229 D PFAM: SNARE associated Golgi protein; KEGG: amd:AMED_2654 hypothetical protein; hypothetical protein 1591516..1592229 Pseudonocardia dioxanivorans CB1190 10363347 YP_004331615.1 CDS Psed_1524 NC_015312.1 1593008 1593475 R PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: mjl:Mjls_3657 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(1593008..1593475) Pseudonocardia dioxanivorans CB1190 10363350 YP_004331616.1 CDS Psed_1525 NC_015312.1 1593624 1593845 D KEGG: ami:Amir_1029 hypothetical protein; hypothetical protein 1593624..1593845 Pseudonocardia dioxanivorans CB1190 10363351 YP_004331617.1 CDS Psed_1526 NC_015312.1 1593856 1595058 R KEGG: rop:ROP_61090 ferredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase complement(1593856..1595058) Pseudonocardia dioxanivorans CB1190 10363352 YP_004331618.1 CDS Psed_1527 NC_015312.1 1595152 1595931 R KEGG: svi:Svir_01790 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; SigB/F/G subfamily RNA polymerase sigma-28 subunit complement(1595152..1595931) Pseudonocardia dioxanivorans CB1190 10363353 YP_004331619.1 CDS Psed_1528 NC_015312.1 1595928 1596380 R KEGG: sen:SACE_4196 anti-sigma factor; anti-sigma factor complement(1595928..1596380) Pseudonocardia dioxanivorans CB1190 10363354 YP_004331620.1 CDS Psed_1529 NC_015312.1 1596879 1597544 D hypothetical protein 1596879..1597544 Pseudonocardia dioxanivorans CB1190 10363355 YP_004331621.1 CDS Psed_1530 NC_015312.1 1597746 1598039 R PFAM: Transcription factor WhiB; KEGG: ami:Amir_6542 transcription factor WhiB; transcription factor WhiB complement(1597746..1598039) Pseudonocardia dioxanivorans CB1190 10363356 YP_004331622.1 CDS Psed_1531 NC_015312.1 1598426 1598878 R KEGG: gob:Gobs_2116 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; anti-anti-sigma factor complement(1598426..1598878) Pseudonocardia dioxanivorans CB1190 10363357 YP_004331623.1 CDS Psed_1532 NC_015312.1 1598875 1600680 R KEGG: sen:SACE_3551 selenocysteine-specific translation elongation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 3; selenocysteine-specific translation elongation factor complement(1598875..1600680) Pseudonocardia dioxanivorans CB1190 10363358 YP_004331624.1 CDS Psed_1533 NC_015312.1 1600685 1601995 R TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: sro:Sros_3738 L-seryl-tRNA(sec) selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase; L-seryl-tRNA selenium transferase complement(1600685..1601995) Pseudonocardia dioxanivorans CB1190 10363359 YP_004331625.1 CDS Psed_1534 NC_015312.1 1602053 1603087 D TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase, class I; KEGG: msm:MSMEG_1852 selenide, water dikinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; Selenide, water dikinase 1602053..1603087 Pseudonocardia dioxanivorans CB1190 10363360 YP_004331626.1 CDS Psed_1535 NC_015312.1 1603151 1604044 D PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 1603151..1604044 Pseudonocardia dioxanivorans CB1190 10363361 YP_004331627.1 CDS Psed_1536 NC_015312.1 1604115 1604882 R PFAM: Methyltransferase type 12; KEGG: fal:FRAAL3697 methyltransferase; type 12 methyltransferase complement(1604115..1604882) Pseudonocardia dioxanivorans CB1190 10363362 YP_004331628.1 CDS Psed_1537 NC_015312.1 1605010 1606344 R PFAM: Amidase; KEGG: saq:Sare_0864 amidase; amidase complement(1605010..1606344) Pseudonocardia dioxanivorans CB1190 10363363 YP_004331629.1 CDS Psed_1538 NC_015312.1 1606479 1606871 R KEGG: gob:Gobs_2116 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(1606479..1606871) Pseudonocardia dioxanivorans CB1190 10363364 YP_004331630.1 CDS Psed_1539 NC_015312.1 1607206 1608081 D KEGG: cme:CMI243C plastid terminal oxidase; hypothetical protein 1607206..1608081 Pseudonocardia dioxanivorans CB1190 10363365 YP_004331631.1 CDS Psed_1540 NC_015312.1 1608233 1609009 D PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_6806 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1608233..1609009 Pseudonocardia dioxanivorans CB1190 10363366 YP_004331632.1 CDS Psed_1541 NC_015312.1 1609006 1610727 D KEGG: fri:FraEuI1c_6805 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 1609006..1610727 Pseudonocardia dioxanivorans CB1190 10363367 YP_004331633.1 CDS Psed_1542 NC_015312.1 1610729 1613089 D PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: fre:Franean1_6492 hypothetical protein; hypothetical protein 1610729..1613089 Pseudonocardia dioxanivorans CB1190 10363368 YP_004331634.1 CDS Psed_1543 NC_015312.1 1613158 1613937 R KEGG: amd:AMED_3094 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(1613158..1613937) Pseudonocardia dioxanivorans CB1190 10363369 YP_004331635.1 CDS Psed_1544 NC_015312.1 1614045 1614827 R KEGG: bmd:BMD_5005 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1614045..1614827) Pseudonocardia dioxanivorans CB1190 10363370 YP_004331636.1 CDS Psed_1545 NC_015312.1 1614977 1615444 D KEGG: tro:trd_1682 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1614977..1615444 Pseudonocardia dioxanivorans CB1190 10363371 YP_004331637.1 CDS Psed_1546 NC_015312.1 1615446 1616843 D PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; KEGG: rop:ROP_29700 acetyl-CoA carboxylase biotin carboxylase subunit; SMART: Biotin carboxylase, C-terminal; Biotin carboxylase 1615446..1616843 Pseudonocardia dioxanivorans CB1190 10363372 YP_004331638.1 CDS Psed_1547 NC_015312.1 1616840 1618315 D KEGG: rop:ROP_29690 carboxyltransferase; PFAM: Carboxylase, conserved domain; Pyruvate carboxyltransferase; pyruvate carboxylase 1616840..1618315 Pseudonocardia dioxanivorans CB1190 10363373 YP_004331639.1 CDS Psed_1548 NC_015312.1 1618382 1619107 D KEGG: rop:ROP_29760 hypothetical protein; hypothetical protein 1618382..1619107 Pseudonocardia dioxanivorans CB1190 10363374 YP_004331640.1 CDS Psed_1549 NC_015312.1 1619097 1620647 D KEGG: rop:ROP_29750 hypothetical protein; hypothetical protein 1619097..1620647 Pseudonocardia dioxanivorans CB1190 10363375 YP_004331641.1 CDS Psed_1550 NC_015312.1 1620734 1622209 D KEGG: rop:ROP_29740 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1620734..1622209 Pseudonocardia dioxanivorans CB1190 10363376 YP_004331642.1 CDS Psed_1551 NC_015312.1 1622214 1622816 D KEGG: rop:ROP_29730 hypothetical protein; hypothetical protein 1622214..1622816 Pseudonocardia dioxanivorans CB1190 10363377 YP_004331643.1 CDS Psed_1552 NC_015312.1 1622834 1624609 D KEGG: rop:ROP_29720 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; pyruvate, phosphate dikinase 1622834..1624609 Pseudonocardia dioxanivorans CB1190 10363378 YP_004331644.1 CDS Psed_1553 NC_015312.1 1624606 1625793 D TIGRFAM: Thiolase; KEGG: fri:FraEuI1c_4549 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 1624606..1625793 Pseudonocardia dioxanivorans CB1190 10363379 YP_004331645.1 CDS Psed_1554 NC_015312.1 1625790 1626533 D KEGG: nml:Namu_2349 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 1625790..1626533 Pseudonocardia dioxanivorans CB1190 10363380 YP_004331646.1 CDS Psed_1555 NC_015312.1 1626787 1628649 D PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: nca:Noca_2395 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 1626787..1628649 Pseudonocardia dioxanivorans CB1190 10363381 YP_004331647.1 CDS Psed_1556 NC_015312.1 1628749 1630776 R KEGG: amd:AMED_0311 NADPH-dependent 2,4-dienoyl-CoA reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 2,4-dienoyl-CoA reductase complement(1628749..1630776) Pseudonocardia dioxanivorans CB1190 10363382 YP_004331648.1 CDS Psed_1557 NC_015312.1 1630872 1631330 R PFAM: Helix-turn-helix, HxlR type; KEGG: tcu:Tcur_0206 HxlR family transcriptional regulator; HxlR family transcriptional regulator complement(1630872..1631330) Pseudonocardia dioxanivorans CB1190 10363383 YP_004331649.1 CDS Psed_1558 NC_015312.1 1631467 1632156 D PFAM: Domain of unknown function DUF125, transmembrane; KEGG: bcv:Bcav_2681 protein of unknown function DUF125 transmembrane; hypothetical protein 1631467..1632156 Pseudonocardia dioxanivorans CB1190 10363384 YP_004331650.1 CDS Psed_1559 NC_015312.1 1632286 1632945 R KEGG: fre:Franean1_6494 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator complement(1632286..1632945) Pseudonocardia dioxanivorans CB1190 10363385 YP_004331651.1 CDS Psed_1560 NC_015312.1 1633311 1634375 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 1633311..1634375 Pseudonocardia dioxanivorans CB1190 10363386 YP_004331652.1 CDS Psed_1561 NC_015312.1 1634390 1635688 D TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding; KEGG: mkm:Mkms_2751 competence damage-inducible protein A; SMART: Molybdopterin binding; competence/damage-inducible protein CinA 1634390..1635688 Pseudonocardia dioxanivorans CB1190 10363387 YP_004331653.1 CDS Psed_1562 NC_015312.1 1635786 1636679 R KEGG: mtf:TBFG_13542 PE-PGRS family protein; hypothetical protein complement(1635786..1636679) Pseudonocardia dioxanivorans CB1190 10363388 YP_004331654.1 CDS Psed_1563 NC_015312.1 1636947 1637699 R KEGG: amd:AMED_0390 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(1636947..1637699) Pseudonocardia dioxanivorans CB1190 10363389 YP_004331655.1 CDS Psed_1564 NC_015312.1 1637769 1638950 D KEGG: tcu:Tcur_2458 4-hydroxybenzoate 3-monooxygenase; PFAM: Monooxygenase, FAD-binding; 4-hydroxybenzoate 3-monooxygenase 1637769..1638950 Pseudonocardia dioxanivorans CB1190 10363390 YP_004331656.1 CDS Psed_1565 NC_015312.1 1638947 1639669 D TIGRFAM: Protocatechuate 3,4-dioxygenase, beta subunit; KEGG: amd:AMED_1860 protocatechuate 3,4-dioxygenase, beta subunit; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; protocatechuate 3,4-dioxygenase subunit beta 1638947..1639669 Pseudonocardia dioxanivorans CB1190 10363391 YP_004331657.1 CDS Psed_1566 NC_015312.1 1639662 1640255 D TIGRFAM: Protocatechuate 3,4-dioxygenase, alpha subunit; KEGG: svi:Svir_13020 protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; protocatechuate 3,4-dioxygenase subunit alpha 1639662..1640255 Pseudonocardia dioxanivorans CB1190 10363392 YP_004331658.1 CDS Psed_1567 NC_015312.1 1640366 1640863 D PFAM: GtrA-like protein; KEGG: sen:SACE_6097 glycosyl transferase; GtrA family protein 1640366..1640863 Pseudonocardia dioxanivorans CB1190 10363393 YP_004331659.1 CDS Psed_1568 NC_015312.1 1640833 1641621 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO0241 transcriptional regulator; TetR family transcriptional regulator complement(1640833..1641621) Pseudonocardia dioxanivorans CB1190 10363394 YP_004331660.1 CDS Psed_1569 NC_015312.1 1641720 1642646 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: kfl:Kfla_5811 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1641720..1642646 Pseudonocardia dioxanivorans CB1190 10363395 YP_004331661.1 CDS Psed_1570 NC_015312.1 1642678 1643850 R KEGG: fal:FRAAL3507 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase complement(1642678..1643850) Pseudonocardia dioxanivorans CB1190 10363396 YP_004331662.1 CDS Psed_1571 NC_015312.1 1643919 1644917 D KEGG: cmi:CMM_2121 glutathione S-transferase; PFAM: Glutathione S-transferase, C-terminal; glutathione transferase 1643919..1644917 Pseudonocardia dioxanivorans CB1190 10363397 YP_004331663.1 CDS Psed_1572 NC_015312.1 1644982 1646211 D PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: svi:Svir_01720 beta-glucosidase-like glycosyl hydrolase; glycoside hydrolase protein 1644982..1646211 Pseudonocardia dioxanivorans CB1190 10363398 YP_004331664.1 CDS Psed_1573 NC_015312.1 1646334 1651955 R SMART: Biotin carboxylase, C-terminal; manually curated; KEGG: gob:Gobs_2423 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; Carboxyl transferase; biotin carboxylase complement(1646334..1651955) Pseudonocardia dioxanivorans CB1190 10363399 YP_004331665.1 CDS Psed_1574 NC_015312.1 1652170 1652724 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:blr2255 hypothetical protein; carboxymuconolactone decarboxylase 1652170..1652724 Pseudonocardia dioxanivorans CB1190 10363400 YP_004331666.1 CDS Psed_1575 NC_015312.1 1652760 1653263 R hypothetical protein complement(1652760..1653263) Pseudonocardia dioxanivorans CB1190 10363401 YP_004331667.1 CDS Psed_1576 NC_015312.1 1653372 1654538 D KEGG: fri:FraEuI1c_6672 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 1653372..1654538 Pseudonocardia dioxanivorans CB1190 10363402 YP_004331668.1 CDS Psed_1577 NC_015312.1 1654559 1654960 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL3816 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1654559..1654960 Pseudonocardia dioxanivorans CB1190 10363403 YP_004331669.1 CDS Psed_1578 NC_015312.1 1655030 1655440 R PFAM: Polyketide cyclase/dehydrase; KEGG: kfl:Kfla_3820 hypothetical protein; polyketide cyclase/dehydrase complement(1655030..1655440) Pseudonocardia dioxanivorans CB1190 10363404 YP_004331670.1 CDS Psed_1579 NC_015312.1 1655478 1656062 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL3795 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1655478..1656062) Pseudonocardia dioxanivorans CB1190 10363405 YP_004331671.1 CDS Psed_1580 NC_015312.1 1656059 1657573 R PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_7073 arabinose efflux permease-like protein; major facilitator superfamily protein complement(1656059..1657573) Pseudonocardia dioxanivorans CB1190 10363406 YP_004331672.1 CDS Psed_1582 NC_015312.1 1658248 1659198 R PFAM: Excalibur calcium-binding domain; KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA; excalibur domain-containing protein complement(1658248..1659198) Pseudonocardia dioxanivorans CB1190 10363408 YP_004331673.1 CDS Psed_1583 NC_015312.1 1659389 1659781 D KEGG: kfl:Kfla_5151 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 1659389..1659781 Pseudonocardia dioxanivorans CB1190 10363409 YP_004331674.1 CDS Psed_1584 NC_015312.1 1659895 1661268 D KEGG: fra:Francci3_2843 diphosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase domain; 6-phosphofructokinase 1659895..1661268 Pseudonocardia dioxanivorans CB1190 10363410 YP_004331675.1 CDS Psed_1585 NC_015312.1 1661471 1662268 D KEGG: amd:AMED_1324 hypothetical protein; hypothetical protein 1661471..1662268 Pseudonocardia dioxanivorans CB1190 10363411 YP_004331676.1 CDS Psed_1586 NC_015312.1 1662265 1665066 D PFAM: Membrane protein of unknown function; SNARE associated Golgi protein; KEGG: amd:AMED_1322 hypothetical protein; hypothetical protein 1662265..1665066 Pseudonocardia dioxanivorans CB1190 10363412 YP_004331677.1 CDS Psed_1587 NC_015312.1 1665201 1666694 R KEGG: gob:Gobs_4160 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(1665201..1666694) Pseudonocardia dioxanivorans CB1190 10363413 YP_004331678.1 CDS Psed_1588 NC_015312.1 1666837 1667736 D KEGG: bpe:BP0285 acetyl esterase; hypothetical protein 1666837..1667736 Pseudonocardia dioxanivorans CB1190 10363414 YP_004331679.1 CDS Psed_1589 NC_015312.1 1667865 1668644 D KEGG: svi:Svir_04780 hypothetical protein; hypothetical protein 1667865..1668644 Pseudonocardia dioxanivorans CB1190 10363415 YP_004331680.1 CDS Psed_1590 NC_015312.1 1668698 1669885 D KEGG: nml:Namu_0044 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 1668698..1669885 Pseudonocardia dioxanivorans CB1190 10363416 YP_004331681.1 CDS Psed_1591 NC_015312.1 1669934 1671637 R KEGG: sen:SACE_6340 trypsin-like serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap complement(1669934..1671637) Pseudonocardia dioxanivorans CB1190 10363417 YP_004331682.1 CDS Psed_1592 NC_015312.1 1671782 1672147 D KEGG: rop:ROP_03550 hypothetical protein; hypothetical protein 1671782..1672147 Pseudonocardia dioxanivorans CB1190 10363418 YP_004331683.1 CDS Psed_1593 NC_015312.1 1672144 1672584 D KEGG: mbt:JTY_1895 hypothetical protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 1672144..1672584 Pseudonocardia dioxanivorans CB1190 10363419 YP_004331684.1 CDS Psed_1594 NC_015312.1 1672809 1674032 D PFAM: Uncharacterised protein family UPF0016; KEGG: ami:Amir_2448 protein of unknown function UPF0016; hypothetical protein 1672809..1674032 Pseudonocardia dioxanivorans CB1190 10363420 YP_004331685.1 CDS Psed_1596 NC_015312.1 1674674 1676335 R KEGG: sds:SDEG_1595 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(1674674..1676335) Pseudonocardia dioxanivorans CB1190 10363422 YP_004331686.1 CDS Psed_1597 NC_015312.1 1676411 1677037 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_0343 TetR-family protein transcriptional regulator; TetR family transcriptional regulator complement(1676411..1677037) Pseudonocardia dioxanivorans CB1190 10363423 YP_004331687.1 CDS Psed_1598 NC_015312.1 1677133 1678284 D KEGG: fal:FRAAL1666 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 1677133..1678284 Pseudonocardia dioxanivorans CB1190 10363424 YP_004331688.1 CDS Psed_1599 NC_015312.1 1678366 1679940 D KEGG: afo:Afer_1027 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 1678366..1679940 Pseudonocardia dioxanivorans CB1190 10363425 YP_004331689.1 CDS Psed_1600 NC_015312.1 1680007 1681047 R PFAM: Aminoglycoside phosphotransferase; KEGG: hne:HNE_1989 phosphotransferase enzyme family protein; aminoglycoside phosphotransferase complement(1680007..1681047) Pseudonocardia dioxanivorans CB1190 10363426 YP_004331690.1 CDS Psed_1601 NC_015312.1 1681044 1682069 R KEGG: mva:Mvan_3374 aminoglycoside phosphotransferase; hypothetical protein complement(1681044..1682069) Pseudonocardia dioxanivorans CB1190 10363427 YP_004331691.1 CDS Psed_1602 NC_015312.1 1682066 1682632 R KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA; hypothetical protein complement(1682066..1682632) Pseudonocardia dioxanivorans CB1190 10363428 YP_004331692.1 CDS Psed_1603 NC_015312.1 1682981 1684579 D KEGG: mva:Mvan_0346 carboxyl transferase; PFAM: Carboxyl transferase; methylcrotonoyl-CoA carboxylase 1682981..1684579 Pseudonocardia dioxanivorans CB1190 10363429 YP_004331693.1 CDS Psed_1604 NC_015312.1 1684588 1686582 D PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: mva:Mvan_0345 carbamoyl-phosphate synthase L chain, ATP-binding; SMART: Biotin carboxylase, C-terminal; methylcrotonoyl-CoA carboxylase 1684588..1686582 Pseudonocardia dioxanivorans CB1190 10363430 YP_004331694.1 CDS Psed_1605 NC_015312.1 1686653 1688224 D KEGG: rpt:Rpal_3720 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1686653..1688224 Pseudonocardia dioxanivorans CB1190 10363431 YP_004331695.1 CDS Psed_1606 NC_015312.1 1688221 1689012 D PFAM: Crotonase, core; KEGG: aac:Aaci_0815 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 1688221..1689012 Pseudonocardia dioxanivorans CB1190 10363432 YP_004331696.1 CDS Psed_1607 NC_015312.1 1689009 1690529 D KEGG: rop:ROP_46660 acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1689009..1690529 Pseudonocardia dioxanivorans CB1190 10363433 YP_004331697.1 CDS Psed_1608 NC_015312.1 1690526 1691290 D PFAM: Crotonase, core; KEGG: mjl:Mjls_3219 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 1690526..1691290 Pseudonocardia dioxanivorans CB1190 10363434 YP_004331698.1 CDS Psed_1609 NC_015312.1 1691294 1692079 D KEGG: mgi:Mflv_4597 wyosine base formation; TIGRFAM: Conserved hypothetical protein CHP03084; Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Wyosine base formation; hypothetical protein 1691294..1692079 Pseudonocardia dioxanivorans CB1190 10363435 YP_004331699.1 CDS Psed_1610 NC_015312.1 1692076 1693821 D PFAM: Protein of unknown function DUF1446; KEGG: mgi:Mflv_4598 hypothetical protein; hypothetical protein 1692076..1693821 Pseudonocardia dioxanivorans CB1190 10363436 YP_004331700.1 CDS Psed_1611 NC_015312.1 1693907 1694479 R KEGG: fre:Franean1_3510 adenylate kinase; adenylate kinase complement(1693907..1694479) Pseudonocardia dioxanivorans CB1190 10363437 YP_004331701.1 CDS Psed_1612 NC_015312.1 1694493 1695344 R PFAM: Alpha/beta hydrolase fold-1; KEGG: sgr:SGR_2246 hydrolase; alpha/beta hydrolase complement(1694493..1695344) Pseudonocardia dioxanivorans CB1190 10363438 YP_004331702.1 CDS Psed_1613 NC_015312.1 1695448 1695759 R KEGG: svi:Svir_33240 hypothetical protein; hypothetical protein complement(1695448..1695759) Pseudonocardia dioxanivorans CB1190 10363439 YP_004331703.1 CDS Psed_1614 NC_015312.1 1695955 1698225 R KEGG: bfa:Bfae_09180 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator complement(1695955..1698225) Pseudonocardia dioxanivorans CB1190 10363440 YP_004331704.1 CDS Psed_1615 NC_015312.1 1698609 1699457 D KEGG: afw:Anae109_2271 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00268; PFAM: Asparagine synthase; hypothetical protein 1698609..1699457 Pseudonocardia dioxanivorans CB1190 10363441 YP_004331705.1 CDS Psed_1616 NC_015312.1 1699454 1700722 D PFAM: Uncharacterised protein family UPF0272; Phosphoribosylaminoimidazole carboxylase, core; KEGG: cai:Caci_4916 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; hypothetical protein 1699454..1700722 Pseudonocardia dioxanivorans CB1190 10363442 YP_004331706.1 CDS Psed_1617 NC_015312.1 1700632 1701108 R PFAM: Peroxiredoxin, OsmC-like protein; KEGG: gct:GC56T3_1846 OsmC family protein; OsmC family protein complement(1700632..1701108) Pseudonocardia dioxanivorans CB1190 10363443 YP_004331707.1 CDS Psed_1618 NC_015312.1 1701203 1701562 D hypothetical protein 1701203..1701562 Pseudonocardia dioxanivorans CB1190 10363444 YP_004331708.1 CDS Psed_1619 NC_015312.1 1701577 1702371 D KEGG: cwo:Cwoe_0088 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA; phosphosulfolactate synthase 1701577..1702371 Pseudonocardia dioxanivorans CB1190 10363445 YP_004331709.1 CDS Psed_1620 NC_015312.1 1702368 1703435 D KEGG: nca:Noca_4838 hypothetical protein; hypothetical protein 1702368..1703435 Pseudonocardia dioxanivorans CB1190 10363446 YP_004331710.1 CDS Psed_1621 NC_015312.1 1703420 1704775 D PFAM: Lyase 1, N-terminal; KEGG: nca:Noca_4818 fumarate lyase; Fumarate lyase 1703420..1704775 Pseudonocardia dioxanivorans CB1190 10363447 YP_004331711.1 CDS Psed_1622 NC_015312.1 1704772 1705755 D KEGG: nca:Noca_4819 D-cysteine desulfhydrase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; 1-aminocyclopropane-1-carboxylate deaminase 1704772..1705755 Pseudonocardia dioxanivorans CB1190 10363448 YP_004331712.1 CDS Psed_1623 NC_015312.1 1705752 1707257 D TIGRFAM: Argininosuccinate lyase; KEGG: nca:Noca_4820 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; argininosuccinate lyase 1705752..1707257 Pseudonocardia dioxanivorans CB1190 10363449 YP_004331713.1 CDS Psed_1624 NC_015312.1 1707443 1708777 D KEGG: chl:Chy400_3865 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; CoA-disulfide reductase 1707443..1708777 Pseudonocardia dioxanivorans CB1190 10363450 YP_004331714.1 CDS Psed_1625 NC_015312.1 1708784 1709611 D KEGG: bge:BC1002_5635 hypothetical protein; hypothetical protein 1708784..1709611 Pseudonocardia dioxanivorans CB1190 10363451 YP_004331715.1 CDS Psed_1626 NC_015312.1 1709725 1710339 D hypothetical protein 1709725..1710339 Pseudonocardia dioxanivorans CB1190 10363452 YP_004331716.1 CDS Psed_1627 NC_015312.1 1710336 1710842 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: azc:AZC_0070 histone acetyltransferase; GCN5-like N-acetyltransferase 1710336..1710842 Pseudonocardia dioxanivorans CB1190 10363453 YP_004331717.1 CDS Psed_1628 NC_015312.1 1711067 1714255 R KEGG: tbi:Tbis_2669 winged helix family transcriptional regulator ATPase; PFAM: Signal transduction response regulator, C-terminal; Bacterial transcriptional activator domain; ATPase domain, prokaryote; Tetratricopeptide TPR-1; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat; winged helix family transcriptional regulator complement(1711067..1714255) Pseudonocardia dioxanivorans CB1190 10363454 YP_004331718.1 CDS Psed_1629 NC_015312.1 1714464 1714865 R KEGG: gob:Gobs_2618 hypothetical protein; hypothetical protein complement(1714464..1714865) Pseudonocardia dioxanivorans CB1190 10363455 YP_004331719.1 CDS Psed_1630 NC_015312.1 1714894 1715511 R TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: pva:Pvag_pPag20175 nitrile hydratase alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha complement(1714894..1715511) Pseudonocardia dioxanivorans CB1190 10363456 YP_004331720.1 CDS Psed_1631 NC_015312.1 1715508 1716191 R KEGG: rpb:RPB_2705 nitrile hydratase; nitrile hydratase complement(1715508..1716191) Pseudonocardia dioxanivorans CB1190 10363457 YP_004331721.1 CDS Psed_1632 NC_015312.1 1716379 1716894 R KEGG: nml:Namu_5382 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(1716379..1716894) Pseudonocardia dioxanivorans CB1190 10363458 YP_004331722.1 CDS Psed_1633 NC_015312.1 1716942 1717370 D KEGG: sen:SACE_3300 hypothetical protein; hypothetical protein 1716942..1717370 Pseudonocardia dioxanivorans CB1190 10363459 YP_004331723.1 CDS Psed_1634 NC_015312.1 1717407 1718936 R KEGG: gob:Gobs_0281 phytochrome sensor protein; PFAM: Signal transduction response regulator, C-terminal; GAF; SMART: Signal transduction response regulator, C-terminal; phytochrome sensor protein complement(1717407..1718936) Pseudonocardia dioxanivorans CB1190 10363460 YP_004331724.1 CDS Psed_1635 NC_015312.1 1719129 1719863 D KEGG: sen:SACE_2381 response regulator, two-component system; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 1719129..1719863 Pseudonocardia dioxanivorans CB1190 10363461 YP_004331725.1 CDS Psed_1636 NC_015312.1 1720039 1720755 D KEGG: bph:Bphy_6084 XRE family transcriptional regulator; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; cupin 1720039..1720755 Pseudonocardia dioxanivorans CB1190 10363462 YP_004331726.1 CDS Psed_1637 NC_015312.1 1720755 1721741 D PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; KEGG: bcv:Bcav_4029 2-dehydropantoate 2-reductase; ketopantoate reductase ApbA/PanE domain-containing protein 1720755..1721741 Pseudonocardia dioxanivorans CB1190 10363463 YP_004331727.1 CDS Psed_1638 NC_015312.1 1721777 1722163 R KEGG: kra:Krad_0790 hypothetical protein; hypothetical protein complement(1721777..1722163) Pseudonocardia dioxanivorans CB1190 10363464 YP_004331728.1 CDS Psed_1639 NC_015312.1 1723002 1723325 D hypothetical protein 1723002..1723325 Pseudonocardia dioxanivorans CB1190 10363465 YP_004331729.1 CDS Psed_1640 NC_015312.1 1723328 1725184 D KEGG: sen:SACE_5910 hypothetical protein; hypothetical protein 1723328..1725184 Pseudonocardia dioxanivorans CB1190 10363466 YP_004331730.1 CDS Psed_1641 NC_015312.1 1725168 1727900 D KEGG: sen:SACE_5909 hypothetical protein; hypothetical protein 1725168..1727900 Pseudonocardia dioxanivorans CB1190 10363467 YP_004331731.1 CDS Psed_1642 NC_015312.1 1727916 1729196 D PFAM: Domain of unknown function DUF395, YeeE/YedE; KEGG: sen:SACE_1782 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 1727916..1729196 Pseudonocardia dioxanivorans CB1190 10363468 YP_004331732.1 CDS Psed_1643 NC_015312.1 1729228 1729473 D hypothetical protein 1729228..1729473 Pseudonocardia dioxanivorans CB1190 10363469 YP_004331733.1 CDS Psed_1644 NC_015312.1 1729916 1730941 R TIGRFAM: Phosphofructokinase, pyrophosphate dependent; HAMAP: Phosphofructokinase; KEGG: sco:SCO2119 6-phosphofructokinase; PFAM: Phosphofructokinase domain; 6-phosphofructokinase complement(1729916..1730941) Pseudonocardia dioxanivorans CB1190 10363470 YP_004331734.1 CDS Psed_1645 NC_015312.1 1731093 1731803 R HAMAP: Peptidase S14, ClpP; KEGG: svi:Svir_12180 ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit complement(1731093..1731803) Pseudonocardia dioxanivorans CB1190 10363471 YP_004331735.1 CDS Psed_1646 NC_015312.1 1731962 1732390 D KEGG: stp:Strop_3944 hypothetical protein; hypothetical protein 1731962..1732390 Pseudonocardia dioxanivorans CB1190 10363472 YP_004331736.1 CDS Psed_1647 NC_015312.1 1732407 1733282 R KEGG: svi:Svir_27870 hypothetical protein; hypothetical protein complement(1732407..1733282) Pseudonocardia dioxanivorans CB1190 10363473 YP_004331737.1 CDS Psed_1648 NC_015312.1 1733443 1734756 R KEGG: svi:Svir_27870 hypothetical protein; hypothetical protein complement(1733443..1734756) Pseudonocardia dioxanivorans CB1190 10363474 YP_004331738.1 CDS Psed_1649 NC_015312.1 1735295 1736173 D PFAM: Pentapeptide repeat; KEGG: sro:Sros_5479 hypothetical protein; pentapeptide repeat-containing protein 1735295..1736173 Pseudonocardia dioxanivorans CB1190 10363475 YP_004331739.1 CDS Psed_1650 NC_015312.1 1736295 1737221 R KEGG: sma:SAV_7424 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1736295..1737221) Pseudonocardia dioxanivorans CB1190 10363476 YP_004331740.1 CDS Psed_1651 NC_015312.1 1737336 1737818 D KEGG: cwo:Cwoe_3822 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1737336..1737818 Pseudonocardia dioxanivorans CB1190 10363477 YP_004331741.1 CDS Psed_1652 NC_015312.1 1738050 1740029 R PFAM: Protein of unknown function DUF477; KEGG: gob:Gobs_0486 hypothetical protein; hypothetical protein complement(1738050..1740029) Pseudonocardia dioxanivorans CB1190 10363478 YP_004331742.1 CDS Psed_1653 NC_015312.1 1740136 1741440 R KEGG: sen:SACE_1164 hypothetical protein; hypothetical protein complement(1740136..1741440) Pseudonocardia dioxanivorans CB1190 10363479 YP_004331743.1 CDS Psed_1654 NC_015312.1 1741440 1741934 R KEGG: kfl:Kfla_1656 hypothetical protein; hypothetical protein complement(1741440..1741934) Pseudonocardia dioxanivorans CB1190 10363480 YP_004331744.1 CDS Psed_1655 NC_015312.1 1741931 1742884 R KEGG: fre:Franean1_7244 hypothetical protein; hypothetical protein complement(1741931..1742884) Pseudonocardia dioxanivorans CB1190 10363481 YP_004331745.1 CDS Psed_1656 NC_015312.1 1743021 1743761 R KEGG: ret:RHE_CH03437 hypothetical protein; hypothetical protein complement(1743021..1743761) Pseudonocardia dioxanivorans CB1190 10363482 YP_004331746.1 CDS Psed_1657 NC_015312.1 1743774 1743983 R PFAM: Cobalt transporter subunit CbtB, KEGG: bgf:BC1003_4412 hypothetical protein; cobalt transporter subunit CbtB complement(1743774..1743983) Pseudonocardia dioxanivorans CB1190 10363483 YP_004331747.1 CDS Psed_1658 NC_015312.1 1744298 1746466 D PFAM: Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase, Fe4S4 domain; Molybdopterin oxidoreductase; KEGG: rsl:RPSI07_2642 molybdopterin oxidoreductase; nitrate reductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; trimethylamine-N-oxide reductase (cytochrome c) 1744298..1746466 Pseudonocardia dioxanivorans CB1190 10363484 YP_004331748.1 CDS Psed_1659 NC_015312.1 1746463 1747407 R KEGG: rop:ROP_58480 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(1746463..1747407) Pseudonocardia dioxanivorans CB1190 10363485 YP_004331749.1 CDS Psed_1660 NC_015312.1 1747839 1748642 R PFAM: Domain of unknown function DUF305; KEGG: ami:Amir_6160 protein of unknown function DUF305; hypothetical protein complement(1747839..1748642) Pseudonocardia dioxanivorans CB1190 10363487 YP_004331750.1 CDS Psed_1661 NC_015312.1 1748639 1749673 R KEGG: svi:Svir_29990 hypothetical protein; hypothetical protein complement(1748639..1749673) Pseudonocardia dioxanivorans CB1190 10363488 YP_004331751.1 CDS Psed_1662 NC_015312.1 1749702 1751345 D KEGG: sen:SACE_6300 arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; arginyl-tRNA synthetase 1749702..1751345 Pseudonocardia dioxanivorans CB1190 10363489 YP_004331752.1 CDS Psed_1663 NC_015312.1 1751342 1752841 D TIGRFAM: Diaminopimelate decarboxylase; KEGG: sen:SACE_6299 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; diaminopimelate decarboxylase 1751342..1752841 Pseudonocardia dioxanivorans CB1190 10363490 YP_004331753.1 CDS Psed_1664 NC_015312.1 1753066 1754436 D PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: amd:AMED_7795 homoserine dehydrogenase; homoserine dehydrogenase 1753066..1754436 Pseudonocardia dioxanivorans CB1190 10363491 YP_004331754.1 CDS Psed_1665 NC_015312.1 1754510 1755598 D TIGRFAM: Threonine synthase; KEGG: amd:AMED_7794 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 1754510..1755598 Pseudonocardia dioxanivorans CB1190 10363492 YP_004331755.1 CDS Psed_1666 NC_015312.1 1755598 1756506 D TIGRFAM: Homoserine kinase; HAMAP: Homoserine kinase; KEGG: sen:SACE_6296 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; Homoserine kinase 1755598..1756506 Pseudonocardia dioxanivorans CB1190 10363493 YP_004331756.1 CDS Psed_1667 NC_015312.1 1756859 1759240 D TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: gob:Gobs_4150 transcription termination factor Rho; SMART: Rho termination factor, N-terminal; Cold shock protein; ATPase, AAA+ type, core; transcription termination factor Rho 1756859..1759240 Pseudonocardia dioxanivorans CB1190 10363494 YP_004331757.1 CDS Psed_1668 NC_015312.1 1759395 1759616 D TIGRFAM: Ribosomal protein L31; HAMAP: Ribosomal protein L31; KEGG: ami:Amir_6151 ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 1759395..1759616 Pseudonocardia dioxanivorans CB1190 10363495 YP_004331758.1 CDS Psed_1669 NC_015312.1 1759691 1760791 D SMART: Peptide chain release factor; TIGRFAM: Peptide chain release factor 1; KEGG: ami:Amir_6150 peptide chain release factor 1; HAMAP: Peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; peptide chain release factor 1 1759691..1760791 Pseudonocardia dioxanivorans CB1190 10363496 YP_004331759.1 CDS Psed_1670 NC_015312.1 1760826 1761701 D KEGG: sen:SACE_6291 methyltransferase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase 1760826..1761701 Pseudonocardia dioxanivorans CB1190 10363497 YP_004331760.1 CDS Psed_1671 NC_015312.1 1761744 1762388 D KEGG: ami:Amir_6146 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 1761744..1762388 Pseudonocardia dioxanivorans CB1190 10363498 YP_004331761.1 CDS Psed_1673 NC_015312.1 1763044 1763730 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tcu:Tcur_4146 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1763044..1763730) Pseudonocardia dioxanivorans CB1190 10363500 YP_004331762.1 CDS Psed_1674 NC_015312.1 1763844 1765124 D KEGG: fal:FRAAL5942 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 1763844..1765124 Pseudonocardia dioxanivorans CB1190 10363501 YP_004331763.1 CDS Psed_1675 NC_015312.1 1765137 1766342 D PFAM: Glycosyl transferase, family 4; KEGG: sen:SACE_6288 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; glycosyl transferase protein 1765137..1766342 Pseudonocardia dioxanivorans CB1190 10363502 YP_004331764.1 CDS Psed_1676 NC_015312.1 1766537 1766755 D hypothetical protein 1766537..1766755 Pseudonocardia dioxanivorans CB1190 10363503 YP_004331765.1 CDS Psed_1677 NC_015312.1 1766802 1767206 D KEGG: srt:Srot_0692 ATP synthase I; ATP synthase I 1766802..1767206 Pseudonocardia dioxanivorans CB1190 10363504 YP_004331766.1 CDS Psed_1678 NC_015312.1 1767203 1767937 D TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATPase, F0 complex, subunit A; KEGG: srt:Srot_0693 ATP synthase F0 subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 1767203..1767937 Pseudonocardia dioxanivorans CB1190 10363505 YP_004331767.1 CDS Psed_1679 NC_015312.1 1768045 1768320 D TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: ace:Acel_0648 F0F1 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 1768045..1768320 Pseudonocardia dioxanivorans CB1190 10363506 YP_004331768.1 CDS Psed_1680 NC_015312.1 1768328 1768882 D TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: amd:AMED_7779 F-type H+-transporting ATPase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 1768328..1768882 Pseudonocardia dioxanivorans CB1190 10363507 YP_004331769.1 CDS Psed_1681 NC_015312.1 1768882 1769409 D TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: mjl:Mjls_3865 F0F1 ATP synthase subunit delta; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 1768882..1769409 Pseudonocardia dioxanivorans CB1190 10363508 YP_004331770.1 CDS Psed_1682 NC_015312.1 1769409 1770251 D TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: msp:Mspyr1_17470 ATP synthase, F1 delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta 1769409..1770251 Pseudonocardia dioxanivorans CB1190 10363509 YP_004331771.1 CDS Psed_1683 NC_015312.1 1770316 1771959 D TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: msm:MSMEG_4938 F0F1 ATP synthase subunit alpha; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha 1770316..1771959 Pseudonocardia dioxanivorans CB1190 10363510 YP_004331772.1 CDS Psed_1684 NC_015312.1 1771973 1772971 D TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATPase, F1 complex, gamma subunit; KEGG: msm:MSMEG_4937 F0F1 ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma 1771973..1772971 Pseudonocardia dioxanivorans CB1190 10363511 YP_004331773.1 CDS Psed_1685 NC_015312.1 1772971 1774398 D SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: ami:Amir_6136 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 1772971..1774398 Pseudonocardia dioxanivorans CB1190 10363512 YP_004331774.1 CDS Psed_1686 NC_015312.1 1774418 1774798 D TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: svi:Svir_29540 F0F1 ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATP synthase subunit epsilon 1774418..1774798 Pseudonocardia dioxanivorans CB1190 10363513 YP_004331775.1 CDS Psed_1687 NC_015312.1 1774836 1775273 D PFAM: Protein of unknown function DUF2550; KEGG: ami:Amir_6134 hypothetical protein; hypothetical protein 1774836..1775273 Pseudonocardia dioxanivorans CB1190 10363514 YP_004331776.1 CDS Psed_1688 NC_015312.1 1775283 1775885 R TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; KEGG: fal:FRAAL5927 adenosylcobalamin-dependent diol dehydratase gamma subunit; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; ATP/cobalamin adenosyltransferase complement(1775283..1775885) Pseudonocardia dioxanivorans CB1190 10363515 YP_004331777.1 CDS Psed_1689 NC_015312.1 1776000 1777268 D PFAM: Enolpyruvate transferase domain; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: ami:Amir_6132 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1776000..1777268 Pseudonocardia dioxanivorans CB1190 10363516 YP_004331778.1 CDS Psed_1690 NC_015312.1 1777406 1778218 D PFAM: Domain of unknown function DUF1206; KEGG: gob:Gobs_3823 hypothetical protein; hypothetical protein 1777406..1778218 Pseudonocardia dioxanivorans CB1190 10363517 YP_004331779.1 CDS Psed_1691 NC_015312.1 1778288 1780279 D TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: gob:Gobs_4128 methylmalonyl-CoA mutase large subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; methylmalonyl-CoA mutase large subunit 1778288..1780279 Pseudonocardia dioxanivorans CB1190 10363518 YP_004331780.1 CDS Psed_1692 NC_015312.1 1780312 1781136 R PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; KEGG: sen:SACE_3078 hypothetical protein; ribulose bisphosphate carboxylase large chain complement(1780312..1781136) Pseudonocardia dioxanivorans CB1190 10363519 YP_004331781.1 CDS Psed_1693 NC_015312.1 1781401 1782303 D TIGRFAM: Ectoine/hydroxyEctoine ABC transporter solute-binding protein; Twin-arginine translocation pathway, signal sequence; PFAM: Extracellular solute-binding protein, family 3; KEGG: svi:Svir_29490 ectoine/hydroxyectoine ABC transporter solute-binding protein; SMART: Extracellular solute-binding protein, family 3; ectoine/hydroxyectoine ABC transporter solute-binding protein 1781401..1782303 Pseudonocardia dioxanivorans CB1190 10363520 YP_004331782.1 CDS Psed_1694 NC_015312.1 1782319 1783029 D KEGG: svi:Svir_29480 amino acid ABC transporter membrane protein; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease EhuC; Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; ectoine/hydroxyectoine ABC transporter permease EhuC 1782319..1783029 Pseudonocardia dioxanivorans CB1190 10363521 YP_004331783.1 CDS Psed_1695 NC_015312.1 1783026 1783682 D KEGG: svi:Svir_29470 amino acid ABC transporter membrane protein; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease EhuD; Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; ectoine/hydroxyectoine ABC transporter permease EhuD 1783026..1783682 Pseudonocardia dioxanivorans CB1190 10363522 YP_004331784.1 CDS Psed_1696 NC_015312.1 1783669 1784460 D SMART: ATPase, AAA+ type, core; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, ATP-binding protein; KEGG: svi:Svir_29460 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ectoine/hydroxyectoine ABC transporter ATP-binding protein 1783669..1784460 Pseudonocardia dioxanivorans CB1190 10363523 YP_004331785.1 CDS Psed_1697 NC_015312.1 1784470 1785339 R KEGG: svi:Svir_29490 ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein complement(1784470..1785339) Pseudonocardia dioxanivorans CB1190 10363524 YP_004331786.1 CDS Psed_1698 NC_015312.1 1785477 1786250 R PFAM: Crotonase, core; KEGG: svi:Svir_29450 enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase complement(1785477..1786250) Pseudonocardia dioxanivorans CB1190 10363525 YP_004331787.1 CDS Psed_1699 NC_015312.1 1786264 1787019 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nda:Ndas_0675 transcriptional regulator, TetR family; TetR family transcriptional regulator 1786264..1787019 Pseudonocardia dioxanivorans CB1190 10363526 YP_004331788.1 CDS Psed_1700 NC_015312.1 1787060 1788301 D KEGG: tbi:Tbis_2110 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 1787060..1788301 Pseudonocardia dioxanivorans CB1190 10363527 YP_004331789.1 CDS Psed_1701 NC_015312.1 1788664 1789398 D PFAM: Methyltransferase type 11; KEGG: mav:MAV_2728 hypothetical protein; type 11 methyltransferase 1788664..1789398 Pseudonocardia dioxanivorans CB1190 10363528 YP_004331790.1 CDS Psed_1702 NC_015312.1 1789392 1790549 R KEGG: sen:SACE_3243 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase complement(1789392..1790549) Pseudonocardia dioxanivorans CB1190 10363529 YP_004331791.1 CDS Psed_1703 NC_015312.1 1790536 1791096 R KEGG: msp:Mspyr1_16060 NUDIX family protein; manually curated; PFAM: NUDIX hydrolase domain; NUDIX hydrolase complement(1790536..1791096) Pseudonocardia dioxanivorans CB1190 10363530 YP_004331792.1 CDS Psed_1704 NC_015312.1 1791126 1792091 D manually curated; KEGG: svi:Svir_36430 predicted transcriptional regulator; transcriptional regulator 1791126..1792091 Pseudonocardia dioxanivorans CB1190 10363531 YP_004331793.1 CDS Psed_1705 NC_015312.1 1792109 1793302 R PFAM: Amidohydrolase 1; KEGG: gob:Gobs_2674 amidohydrolase; amidohydrolase complement(1792109..1793302) Pseudonocardia dioxanivorans CB1190 10363532 YP_004331794.1 CDS Psed_1706 NC_015312.1 1793368 1796190 D KEGG: fri:FraEuI1c_4888 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1793368..1796190 Pseudonocardia dioxanivorans CB1190 10363533 YP_004331795.1 CDS Psed_1707 NC_015312.1 1796201 1796860 D KEGG: ami:Amir_6124 hypothetical protein; HAMAP: Uncharacterised protein family UPF0286; PFAM: Uncharacterised protein family UPF0286; hypothetical protein 1796201..1796860 Pseudonocardia dioxanivorans CB1190 10363534 YP_004331796.1 CDS Psed_1708 NC_015312.1 1797018 1798085 D KEGG: gob:Gobs_1833 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase 1797018..1798085 Pseudonocardia dioxanivorans CB1190 10363535 YP_004331797.1 CDS Psed_1709 NC_015312.1 1798158 1799630 D PFAM: Aldehyde dehydrogenase domain; KEGG: sen:SACE_6249 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 1798158..1799630 Pseudonocardia dioxanivorans CB1190 10363536 YP_004331798.1 CDS Psed_1710 NC_015312.1 1799758 1801542 D KEGG: amd:AMED_7745 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxyacyl-CoA dehydrogenase 1799758..1801542 Pseudonocardia dioxanivorans CB1190 10363537 YP_004331799.1 CDS Psed_1711 NC_015312.1 1801590 1801907 D KEGG: amd:AMED_7733 hypothetical protein; hypothetical protein 1801590..1801907 Pseudonocardia dioxanivorans CB1190 10363538 YP_004331800.1 CDS Psed_1712 NC_015312.1 1802202 1803116 R TIGRFAM: DivIVA domain; KEGG: rer:RER_38960 hypothetical protein; DivIVA domain-containing protein complement(1802202..1803116) Pseudonocardia dioxanivorans CB1190 10363539 YP_004331801.1 CDS Psed_1713 NC_015312.1 1803520 1804851 R TIGRFAM: Crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: kfl:Kfla_4989 crotonyl-CoA reductase; SMART: Polyketide synthase, enoylreductase; crotonyl-CoA reductase complement(1803520..1804851) Pseudonocardia dioxanivorans CB1190 10363540 YP_004331802.1 CDS Psed_1714 NC_015312.1 1805150 1805605 R KEGG: req:REQ_17690 glyoxalase protein; TIGRFAM: Methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase complement(1805150..1805605) Pseudonocardia dioxanivorans CB1190 10363541 YP_004331803.1 CDS Psed_1715 NC_015312.1 1805845 1807035 D TIGRFAM: Thiolase; KEGG: ami:Amir_6104 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 1805845..1807035 Pseudonocardia dioxanivorans CB1190 10363542 YP_004331804.1 CDS Psed_1716 NC_015312.1 1807085 1808065 D KEGG: nca:Noca_1798 LAO/AO transport system ATPase; TIGRFAM: ArgK protein; PFAM: ArgK protein; LAO/AO transport system ATPase 1807085..1808065 Pseudonocardia dioxanivorans CB1190 10363543 YP_004331805.1 CDS Psed_1717 NC_015312.1 1808094 1809218 R KEGG: tbi:Tbis_0340 tetratricopeptide domain-containing protein; hypothetical protein complement(1808094..1809218) Pseudonocardia dioxanivorans CB1190 10363544 YP_004331806.1 CDS Psed_1718 NC_015312.1 1809521 1810069 R KEGG: sen:SACE_6221 MarR-transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(1809521..1810069) Pseudonocardia dioxanivorans CB1190 10363545 YP_004331807.1 CDS Psed_1719 NC_015312.1 1810180 1810515 D PFAM: Protein of unknown function DUF77; KEGG: ami:Amir_6081 protein of unknown function DUF77; hypothetical protein 1810180..1810515 Pseudonocardia dioxanivorans CB1190 10363546 YP_004331808.1 CDS Psed_1720 NC_015312.1 1810418 1811602 R PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit complement(1810418..1811602) Pseudonocardia dioxanivorans CB1190 10363547 YP_004331809.1 CDS Psed_1721 NC_015312.1 1811928 1812224 R hypothetical protein complement(1811928..1812224) Pseudonocardia dioxanivorans CB1190 10363548 YP_004331810.1 CDS Psed_1722 NC_015312.1 1812532 1813527 D PFAM: Thioredoxin domain; KEGG: sen:SACE_6218 thioredoxin; thioredoxin 1812532..1813527 Pseudonocardia dioxanivorans CB1190 10363549 YP_004331811.1 CDS Psed_1723 NC_015312.1 1813598 1814956 R KEGG: ami:Amir_6076 metalloprotease-like protein; metalloprotease-like protein complement(1813598..1814956) Pseudonocardia dioxanivorans CB1190 10363550 YP_004331812.1 CDS Psed_1724 NC_015312.1 1815152 1816471 D PFAM: Protein of unknown function DUF2029; KEGG: rxy:Rxyl_2872 hypothetical protein; hypothetical protein 1815152..1816471 Pseudonocardia dioxanivorans CB1190 10363551 YP_004331813.1 CDS Psed_1725 NC_015312.1 1816894 1819392 R KEGG: ami:Amir_6075 1,4-alpha-glucan branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; TIGRFAM: 1,4-alpha-glucan-branching enzyme; HAMAP: 1,4-alpha-glucan-branching enzyme; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; 1,4-alpha-glucan branching enzyme complement(1816894..1819392) Pseudonocardia dioxanivorans CB1190 10363552 YP_004331814.1 CDS Psed_1726 NC_015312.1 1819556 1820509 R KEGG: cur:cur_1817 Fe-S oxidoreductase; hypothetical protein complement(1819556..1820509) Pseudonocardia dioxanivorans CB1190 10363553 YP_004331815.1 CDS Psed_1727 NC_015312.1 1820601 1821281 R KEGG: fra:Francci3_4183 sigma-24; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1820601..1821281) Pseudonocardia dioxanivorans CB1190 10363554 YP_004331816.1 CDS Psed_1728 NC_015312.1 1821429 1822832 R PFAM: Aminoglycoside phosphotransferase; KEGG: rop:ROP_61010 maltokinase; aminoglycoside phosphotransferase complement(1821429..1822832) Pseudonocardia dioxanivorans CB1190 10363555 YP_004331817.1 CDS Psed_1729 NC_015312.1 1822829 1824592 R SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; KEGG: ami:Amir_6073 trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; trehalose synthase complement(1822829..1824592) Pseudonocardia dioxanivorans CB1190 10363556 YP_004331818.1 CDS Psed_1730 NC_015312.1 1824850 1826820 R KEGG: ami:Amir_6072 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; alpha amylase complement(1824850..1826820) Pseudonocardia dioxanivorans CB1190 10363557 YP_004331819.1 CDS Psed_1731 NC_015312.1 1827233 1829788 D TIGRFAM: Alpha-glucan phosphorylase; KEGG: ami:Amir_6071 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; alpha-glucan phosphorylase 1827233..1829788 Pseudonocardia dioxanivorans CB1190 10363558 YP_004331820.1 CDS Psed_1732 NC_015312.1 1829845 1830069 R TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: sma:SAV_5811 hypothetical protein; SMART: Regulatory protein, FmdB; FmdB family regulatory protein complement(1829845..1830069) Pseudonocardia dioxanivorans CB1190 10363559 YP_004331821.1 CDS Psed_1733 NC_015312.1 1830131 1832152 R SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Glycogen debranching enzyme; KEGG: ami:Amir_6067 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; glycogen debranching protein GlgX complement(1830131..1832152) Pseudonocardia dioxanivorans CB1190 10363560 YP_004331822.1 CDS Psed_1734 NC_015312.1 1832173 1833030 D KEGG: svi:Svir_28470 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1832173..1833030 Pseudonocardia dioxanivorans CB1190 10363561 YP_004331823.1 CDS Psed_1735 NC_015312.1 1833068 1833877 D PFAM: Crotonase, core; KEGG: sen:SACE_6207 enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase 1833068..1833877 Pseudonocardia dioxanivorans CB1190 10363562 YP_004331824.1 CDS Psed_1736 NC_015312.1 1833912 1834868 D PFAM: Methyltransferase type 11; KEGG: rop:ROP_65070 methyltransferase; type 11 methyltransferase 1833912..1834868 Pseudonocardia dioxanivorans CB1190 10363563 YP_004331825.1 CDS Psed_1737 NC_015312.1 1834913 1836052 D PFAM: ATPase-like, ATP-binding domain; KEGG: amd:AMED_9311 two-component system histidine kinase; signal transduction histidine kinase 1834913..1836052 Pseudonocardia dioxanivorans CB1190 10363564 YP_004331826.1 CDS Psed_1738 NC_015312.1 1836049 1836708 D KEGG: svi:Svir_39510 response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1836049..1836708 Pseudonocardia dioxanivorans CB1190 10363565 YP_004331827.1 CDS Psed_1739 NC_015312.1 1836858 1837478 D KEGG: kfl:Kfla_4709 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1836858..1837478 Pseudonocardia dioxanivorans CB1190 10363566 YP_004331828.1 CDS Psed_1740 NC_015312.1 1837524 1837727 R hypothetical protein complement(1837524..1837727) Pseudonocardia dioxanivorans CB1190 10363567 YP_004331829.1 CDS Psed_1741 NC_015312.1 1837866 1838639 D KEGG: ami:Amir_6061 acetyltransferase (isoleucine patch superfamily)-like protein; acetyltransferase (isoleucine patch superfamily)-like protein 1837866..1838639 Pseudonocardia dioxanivorans CB1190 10363568 YP_004331830.1 CDS Psed_1742 NC_015312.1 1838690 1839964 R PFAM: Glycosyl transferase, group 1; Starch synthase, catalytic domain; KEGG: ami:Amir_6058 glycosyl transferase group 1; group 1 glycosyl transferase complement(1838690..1839964) Pseudonocardia dioxanivorans CB1190 10363569 YP_004331831.1 CDS Psed_1743 NC_015312.1 1839978 1840835 R PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fre:Franean1_4105 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1839978..1840835) Pseudonocardia dioxanivorans CB1190 10363570 YP_004331832.1 CDS Psed_1744 NC_015312.1 1841206 1842576 D TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: fal:FRAAL4799 NtaA/SnaA/SoxA family monooxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 1841206..1842576 Pseudonocardia dioxanivorans CB1190 10363571 YP_004331833.1 CDS Psed_1745 NC_015312.1 1842607 1844139 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: rop:ROP_14350 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 1842607..1844139 Pseudonocardia dioxanivorans CB1190 10363572 YP_004331834.1 CDS Psed_1746 NC_015312.1 1844136 1845173 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro01762 ABC peptide transporter, permease component; ABC transporter permease 1844136..1845173 Pseudonocardia dioxanivorans CB1190 10363573 YP_004331835.1 CDS Psed_1747 NC_015312.1 1845173 1846024 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro01761 ABC peptide transporter, permease component; ABC transporter permease 1845173..1846024 Pseudonocardia dioxanivorans CB1190 10363574 YP_004331836.1 CDS Psed_1748 NC_015312.1 1846005 1846814 D PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: rop:ROP_14320 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; nickel-transporting ATPase 1846005..1846814 Pseudonocardia dioxanivorans CB1190 10363575 YP_004331837.1 CDS Psed_1749 NC_015312.1 1846807 1847658 D PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fal:FRAAL4794 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; nickel-transporting ATPase 1846807..1847658 Pseudonocardia dioxanivorans CB1190 10363576 YP_004331838.1 CDS Psed_1750 NC_015312.1 1847655 1848434 D KEGG: fal:FRAAL3869 hypothetical protein; hypothetical protein 1847655..1848434 Pseudonocardia dioxanivorans CB1190 10363577 YP_004331839.1 CDS Psed_1751 NC_015312.1 1848431 1848886 D PFAM: Cupin 2, conserved barrel; KEGG: tcu:Tcur_1382 cupin 2 conserved barrel domain-containing protein; cupin 1848431..1848886 Pseudonocardia dioxanivorans CB1190 10363578 YP_004331840.1 CDS Psed_1752 NC_015312.1 1849068 1849373 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sco:SCO5904 hypothetical protein; antibiotic biosynthesis monooxygenase 1849068..1849373 Pseudonocardia dioxanivorans CB1190 10363579 YP_004331841.1 CDS Psed_1753 NC_015312.1 1849545 1850324 D KEGG: amd:AMED_1351 hypothetical protein; hypothetical protein 1849545..1850324 Pseudonocardia dioxanivorans CB1190 10363580 YP_004331842.1 CDS Psed_1754 NC_015312.1 1850273 1851847 R PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; KEGG: ami:Amir_6057 glycoside hydrolase 57; hypothetical protein complement(1850273..1851847) Pseudonocardia dioxanivorans CB1190 10363581 YP_004331843.1 CDS Psed_1755 NC_015312.1 1851844 1852581 R PFAM: Methyltransferase type 11; KEGG: ami:Amir_6056 methyltransferase type 11; type 11 methyltransferase complement(1851844..1852581) Pseudonocardia dioxanivorans CB1190 10363582 YP_004331844.1 CDS Psed_1756 NC_015312.1 1852981 1853826 D KEGG: sus:Acid_4192 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 1852981..1853826 Pseudonocardia dioxanivorans CB1190 10363583 YP_004331845.1 CDS Psed_1757 NC_015312.1 1853834 1854763 R PFAM: Allantoicase domain; TIGRFAM: Allantoicase; HAMAP: Allantoicase; KEGG: rop:ROP_44360 allantoicase; allantoicase complement(1853834..1854763) Pseudonocardia dioxanivorans CB1190 10363584 YP_004331846.1 CDS Psed_1758 NC_015312.1 1854756 1856081 R TIGRFAM: Allantoinase; KEGG: cai:Caci_4726 allantoinase; PFAM: Amidohydrolase 1; allantoinase complement(1854756..1856081) Pseudonocardia dioxanivorans CB1190 10363585 YP_004331847.1 CDS Psed_1759 NC_015312.1 1856078 1856461 R PFAM: AIG2-like; KEGG: sna:Snas_2545 hypothetical protein; AIG2 family protein complement(1856078..1856461) Pseudonocardia dioxanivorans CB1190 10363586 YP_004331848.1 CDS Psed_1760 NC_015312.1 1856523 1858793 R KEGG: gob:Gobs_3387 xanthine dehydrogenase subunit D; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase complement(1856523..1858793) Pseudonocardia dioxanivorans CB1190 10363587 YP_004331849.1 CDS Psed_1761 NC_015312.1 1858790 1860124 R KEGG: nml:Namu_0260 hydroxydechloroatrazine ethylaminohydrolase; PFAM: Amidohydrolase 1; S-adenosylhomocysteine deaminase complement(1858790..1860124) Pseudonocardia dioxanivorans CB1190 10363588 YP_004331850.1 CDS Psed_1762 NC_015312.1 1860121 1860591 R KEGG: amd:AMED_1920 carbon-monoxide dehydrogenase small subunit; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(1860121..1860591) Pseudonocardia dioxanivorans CB1190 10363589 YP_004331851.1 CDS Psed_1763 NC_015312.1 1860591 1861463 R PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: gob:Gobs_3389 molybdopterin dehydrogenase FAD-binding protein; molybdopterin dehydrogenase FAD-binding protein complement(1860591..1861463) Pseudonocardia dioxanivorans CB1190 10363590 YP_004331852.1 CDS Psed_1764 NC_015312.1 1861558 1863072 D PFAM: Purine catabolism PurC-like; KEGG: nml:Namu_1388 PucR family transcriptional regulator; PucR family transcriptional regulator 1861558..1863072 Pseudonocardia dioxanivorans CB1190 10363591 YP_004331853.1 CDS Psed_1765 NC_015312.1 1863131 1863499 R hypothetical protein complement(1863131..1863499) Pseudonocardia dioxanivorans CB1190 10363592 YP_004331854.1 CDS Psed_1766 NC_015312.1 1863754 1864611 R TIGRFAM: Uricase; KEGG: msm:MSMEG_1296 uricase; PFAM: Uricase; urate oxidase complement(1863754..1864611) Pseudonocardia dioxanivorans CB1190 10363593 YP_004331855.1 CDS Psed_1767 NC_015312.1 1864617 1864913 R KEGG: fra:Francci3_0842 transthyretin; TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase; hydroxyisourate hydrolase complement(1864617..1864913) Pseudonocardia dioxanivorans CB1190 10363594 YP_004331856.1 CDS Psed_1768 NC_015312.1 1864910 1865386 R KEGG: kra:Krad_2069 hypothetical protein; TIGRFAM: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase complement(1864910..1865386) Pseudonocardia dioxanivorans CB1190 10363595 YP_004331857.1 CDS Psed_1769 NC_015312.1 1865383 1867242 R KEGG: nml:Namu_0261 xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1; PFAM: Xanthine/uracil/vitamin C permease; Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; xanthine permease complement(1865383..1867242) Pseudonocardia dioxanivorans CB1190 10363596 YP_004331858.1 CDS Psed_1770 NC_015312.1 1867438 1867728 R hypothetical protein complement(1867438..1867728) Pseudonocardia dioxanivorans CB1190 10363597 YP_004331859.1 CDS Psed_1771 NC_015312.1 1868133 1868921 D KEGG: amd:AMED_1653 electron transfer flavoprotein beta subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; electron transfer flavoprotein subunit alpha/beta 1868133..1868921 Pseudonocardia dioxanivorans CB1190 10363598 YP_004331860.1 CDS Psed_1772 NC_015312.1 1868949 1869896 D KEGG: sen:SACE_6196 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; electron transfer flavoprotein subunit alpha 1868949..1869896 Pseudonocardia dioxanivorans CB1190 10363599 YP_004331861.1 CDS Psed_1773 NC_015312.1 1870174 1870935 D KEGG: ami:Amir_6049 ornithine-acyl(acyl carrier protein) N-acyltransferase; ornithine-acyl(acyl carrier protein) N-acyltransferase 1870174..1870935 Pseudonocardia dioxanivorans CB1190 10363600 YP_004331862.1 CDS Psed_1774 NC_015312.1 1871007 1872131 D KEGG: sma:SAV_7311 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1871007..1872131 Pseudonocardia dioxanivorans CB1190 10363601 YP_004331863.1 CDS Psed_1775 NC_015312.1 1872088 1873521 D KEGG: amd:AMED_1660 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase 1872088..1873521 Pseudonocardia dioxanivorans CB1190 10363602 YP_004331864.1 CDS Psed_1776 NC_015312.1 1873518 1874597 D TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: nfa:nfa42670 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA-specific 2-thiouridylase; tRNA-specific 2-thiouridylase mnmA 1873518..1874597 Pseudonocardia dioxanivorans CB1190 10363603 YP_004331865.1 CDS Psed_1777 NC_015312.1 1874669 1875562 D PFAM: Domain of unknown function DUF1206; KEGG: scb:SCAB_8071 integral membrane protein; hypothetical protein 1874669..1875562 Pseudonocardia dioxanivorans CB1190 10363604 YP_004331866.1 CDS Psed_1778 NC_015312.1 1875566 1875859 R PFAM: Protein of unknown function DUF1330; KEGG: bgf:BC1003_4875 hypothetical protein; hypothetical protein complement(1875566..1875859) Pseudonocardia dioxanivorans CB1190 10363605 YP_004331867.1 CDS Psed_1779 NC_015312.1 1876165 1877712 D KEGG: eli:ELI_00975 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1876165..1877712 Pseudonocardia dioxanivorans CB1190 10363606 YP_004331868.1 CDS Psed_1780 NC_015312.1 1877709 1878851 D KEGG: bts:Btus_1990 beta-ketoacyl synthase; PFAM: Thiolase, C-terminal; propanoyl-CoA C-acyltransferase 1877709..1878851 Pseudonocardia dioxanivorans CB1190 10363607 YP_004331869.1 CDS Psed_1781 NC_015312.1 1878848 1880044 D KEGG: fra:Francci3_2247 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 1878848..1880044 Pseudonocardia dioxanivorans CB1190 10363608 YP_004331870.1 CDS Psed_1782 NC_015312.1 1880041 1880637 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: swi:Swit_0760 TetR family transcriptional regulator; TetR family transcriptional regulator 1880041..1880637 Pseudonocardia dioxanivorans CB1190 10363609 YP_004331871.1 CDS Psed_1783 NC_015312.1 1880677 1881942 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: svi:Svir_08670 cobalamin-independent methionine synthase; vitamin-B12 independent methionine synthase 1880677..1881942 Pseudonocardia dioxanivorans CB1190 10363610 YP_004331872.1 CDS Psed_1784 NC_015312.1 1882036 1882341 R hypothetical protein complement(1882036..1882341) Pseudonocardia dioxanivorans CB1190 10363611 YP_004331873.1 CDS Psed_1785 NC_015312.1 1882400 1883518 D KEGG: hoh:Hoch_1789 serine--pyruvate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase; serine--pyruvate transaminase 1882400..1883518 Pseudonocardia dioxanivorans CB1190 10363612 YP_004331874.1 CDS Psed_1786 NC_015312.1 1883526 1884272 R PFAM: Clp, N-terminal; KEGG: rop:ROP_03750 hypothetical protein; Clp domain-containing protein complement(1883526..1884272) Pseudonocardia dioxanivorans CB1190 10363613 YP_004331875.1 CDS Psed_1787 NC_015312.1 1884531 1885388 D PFAM: Luciferase-like, subgroup; KEGG: cai:Caci_7375 luciferase-like monooxygenase; luciferase-like protein 1884531..1885388 Pseudonocardia dioxanivorans CB1190 10363614 YP_004331876.1 CDS Psed_1788 NC_015312.1 1885375 1887813 D SMART: NAD-dependent DNA ligase, N-terminal; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: amd:AMED_1669 DNA ligase (NAD+); HAMAP: NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; DNA ligase 1885375..1887813 Pseudonocardia dioxanivorans CB1190 10363615 YP_004331877.1 CDS Psed_1789 NC_015312.1 1888144 1888863 D PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: mau:Micau_1535 hypothetical protein; hypothetical protein 1888144..1888863 Pseudonocardia dioxanivorans CB1190 10363616 YP_004331878.1 CDS Psed_1790 NC_015312.1 1889017 1890081 D PFAM: Ferredoxin; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; KEGG: stp:Strop_2076 oxidoreductase FAD-binding subunit; ferredoxin 1889017..1890081 Pseudonocardia dioxanivorans CB1190 10363617 YP_004331879.1 CDS Psed_1791 NC_015312.1 1890090 1891232 D PFAM: Fatty acid desaturase, type 1; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase); fatty acid desaturase 1890090..1891232 Pseudonocardia dioxanivorans CB1190 10363618 YP_004331880.1 CDS Psed_1792 NC_015312.1 1891488 1892648 R PFAM: HTH transcriptional regulator, LysR; KEGG: cwo:Cwoe_4185 transcriptional regulator, CdaR; LysR family transcriptional regulator complement(1891488..1892648) Pseudonocardia dioxanivorans CB1190 10363619 YP_004331881.1 CDS Psed_1793 NC_015312.1 1892649 1893308 R PFAM: Amino acid-binding ACT; KEGG: amd:AMED_1671 ACT domain-containing protein; amino acid-binding ACT domain-containing protein complement(1892649..1893308) Pseudonocardia dioxanivorans CB1190 10363620 YP_004331882.1 CDS Psed_1794 NC_015312.1 1893625 1893948 D TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Glu-tRNAGln amidotransferase, C subunit; KEGG: sro:Sros_8075 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 1893625..1893948 Pseudonocardia dioxanivorans CB1190 10363621 YP_004331883.1 CDS Psed_1795 NC_015312.1 1893945 1895450 D TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: sen:SACE_6173 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 1893945..1895450 Pseudonocardia dioxanivorans CB1190 10363622 YP_004331884.1 CDS Psed_1796 NC_015312.1 1895447 1896949 D SMART: Asn/Gln amidotransferase; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: svi:Svir_08750 aspartyl/glutamyl-tRNA amidotransferase subunit B; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Asn/Gln amidotransferase; aspartyl/glutamyl-tRNA amidotransferase subunit B 1895447..1896949 Pseudonocardia dioxanivorans CB1190 10363623 YP_004331885.1 CDS Psed_1797 NC_015312.1 1897692 1898621 R KEGG: ami:Amir_2715 luciferase-like monooxygenase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4879, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(1897692..1898621) Pseudonocardia dioxanivorans CB1190 10363624 YP_004331886.1 CDS Psed_1799 NC_015312.1 1899600 1900451 R PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: rha:RHA1_ro06693 5-valerolactone hydrolase; SMP-30/Gluconolaconase/LRE-like region-containing protein complement(1899600..1900451) Pseudonocardia dioxanivorans CB1190 10363626 YP_004331887.1 CDS Psed_1800 NC_015312.1 1900493 1901995 R KEGG: sen:SACE_2895 betaine-aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; betaine-aldehyde dehydrogenase complement(1900493..1901995) Pseudonocardia dioxanivorans CB1190 10363627 YP_004331888.1 CDS Psed_1801 NC_015312.1 1902032 1903183 R PFAM: Luciferase-like, subgroup; KEGG: msm:MSMEG_5626 luciferase; luciferase-like protein complement(1902032..1903183) Pseudonocardia dioxanivorans CB1190 10363628 YP_004331889.1 CDS Psed_1802 NC_015312.1 1903501 1904502 D manually curated; PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: nda:Ndas_3659 transcriptional regulator, LacI family; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 1903501..1904502 Pseudonocardia dioxanivorans CB1190 10363629 YP_004331890.1 CDS Psed_1803 NC_015312.1 1904670 1906178 R PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_5274 hypothetical protein; major facilitator superfamily protein complement(1904670..1906178) Pseudonocardia dioxanivorans CB1190 10363630 YP_004331891.1 CDS Psed_1804 NC_015312.1 1906291 1907334 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 1906291..1907334 Pseudonocardia dioxanivorans CB1190 10363631 YP_004331892.1 CDS Psed_1805 NC_015312.1 1907353 1908453 D KEGG: pla:Plav_1165 cyclohexanone monooxygenase; phenylacetone monooxygenase 1907353..1908453 Pseudonocardia dioxanivorans CB1190 10363632 YP_004331893.1 CDS Psed_1806 NC_015312.1 1908472 1908936 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: axy:AXYL_01704 hypothetical protein; hypothetical protein 1908472..1908936 Pseudonocardia dioxanivorans CB1190 10363633 YP_004331894.1 CDS Psed_1807 NC_015312.1 1908933 1910054 D KEGG: fri:FraEuI1c_2474 hypothetical protein; hypothetical protein 1908933..1910054 Pseudonocardia dioxanivorans CB1190 10363634 YP_004331895.1 CDS Psed_1808 NC_015312.1 1910080 1911066 D KEGG: fre:Franean1_1584 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase 1910080..1911066 Pseudonocardia dioxanivorans CB1190 10363635 YP_004331896.1 CDS Psed_1809 NC_015312.1 1911063 1912256 D KEGG: rha:RHA1_ro02283 formyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 1911063..1912256 Pseudonocardia dioxanivorans CB1190 10363636 YP_004331897.1 CDS Psed_1810 NC_015312.1 1912249 1913007 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fre:Franean1_4114 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 1912249..1913007 Pseudonocardia dioxanivorans CB1190 10363637 YP_004331898.1 CDS Psed_1811 NC_015312.1 1913069 1913392 D KEGG: req:REQ_15570 hypothetical protein; hypothetical protein 1913069..1913392 Pseudonocardia dioxanivorans CB1190 10363638 YP_004331899.1 CDS Psed_1812 NC_015312.1 1913535 1913951 D hypothetical protein 1913535..1913951 Pseudonocardia dioxanivorans CB1190 10363639 YP_004331900.1 CDS Psed_1813 NC_015312.1 1914396 1915544 R KEGG: sen:SACE_6165 glucose dehydrogenase; glucose dehydrogenase complement(1914396..1915544) Pseudonocardia dioxanivorans CB1190 10363640 YP_004331901.1 CDS Psed_1814 NC_015312.1 1915629 1916552 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ami:Amir_6027 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1915629..1916552 Pseudonocardia dioxanivorans CB1190 10363641 YP_004331902.1 CDS Psed_1815 NC_015312.1 1916606 1917202 D PFAM: Uncharacterised protein family YphA; KEGG: sen:SACE_6162 hypothetical protein; DoxX family protein 1916606..1917202 Pseudonocardia dioxanivorans CB1190 10363642 YP_004331903.1 CDS Psed_1816 NC_015312.1 1917199 1918005 D PFAM: Aminoglycoside phosphotransferase; KEGG: cwo:Cwoe_5845 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1917199..1918005 Pseudonocardia dioxanivorans CB1190 10363643 YP_004331904.1 CDS Psed_1817 NC_015312.1 1918060 1918710 R PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: rop:ROP_36610 hypothetical protein; bifunctional deaminase-reductase domain-containing protein complement(1918060..1918710) Pseudonocardia dioxanivorans CB1190 10363644 YP_004331905.1 CDS Psed_1818 NC_015312.1 1918843 1920684 R PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: amd:AMED_1683 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase complement(1918843..1920684) Pseudonocardia dioxanivorans CB1190 10363645 YP_004331906.1 CDS Psed_1819 NC_015312.1 1920690 1921109 R KEGG: sen:SACE_6160 hypothetical protein; hypothetical protein complement(1920690..1921109) Pseudonocardia dioxanivorans CB1190 10363646 YP_004331907.1 CDS Psed_1820 NC_015312.1 1921391 1923349 D TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: ami:Amir_6021 acetolactate synthase 1 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase large subunit, biosynthetic type 1921391..1923349 Pseudonocardia dioxanivorans CB1190 10363647 YP_004331908.1 CDS Psed_1821 NC_015312.1 1923349 1923855 D KEGG: svi:Svir_08880 acetolactate synthase 3 regulatory subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase small subunit 1923349..1923855 Pseudonocardia dioxanivorans CB1190 10363648 YP_004331909.1 CDS Psed_1822 NC_015312.1 1923901 1924905 D PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Acetohydroxy acid isomeroreductase; KEGG: amd:AMED_1687 ketol-acid reductoisomerase; ketol-acid reductoisomerase 1923901..1924905 Pseudonocardia dioxanivorans CB1190 10363649 YP_004331910.1 CDS Psed_1823 NC_015312.1 1925036 1926028 D KEGG: req:REQ_33170 fmn-dependent monooxygenase; TIGRFAM: Luciferase oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase oxidoreductase, group 1 1925036..1926028 Pseudonocardia dioxanivorans CB1190 10363650 YP_004331911.1 CDS Psed_1824 NC_015312.1 1926038 1926901 R PFAM: Methyltransferase type 11; KEGG: ava:Ava_C0006 hypothetical protein; type 11 methyltransferase complement(1926038..1926901) Pseudonocardia dioxanivorans CB1190 10363651 YP_004331912.1 CDS Psed_1825 NC_015312.1 1927141 1928742 D TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: sen:SACE_6155 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Amino acid-binding ACT; D-3-phosphoglycerate dehydrogenase 1927141..1928742 Pseudonocardia dioxanivorans CB1190 10363652 YP_004331913.1 CDS Psed_1826 NC_015312.1 1929010 1930050 D HAMAP: 3-isopropylmalate dehydrogenase; KEGG: amd:AMED_1696 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1929010..1930050 Pseudonocardia dioxanivorans CB1190 10363653 YP_004331914.1 CDS Psed_1827 NC_015312.1 1930124 1930438 R KEGG: bbt:BBta_5960 hypothetical protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD complement(1930124..1930438) Pseudonocardia dioxanivorans CB1190 10363654 YP_004331915.1 CDS Psed_1828 NC_015312.1 1930563 1931870 R PFAM: Monooxygenase, FAD-binding; KEGG: tpr:Tpau_1606 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein complement(1930563..1931870) Pseudonocardia dioxanivorans CB1190 10363655 YP_004331916.1 CDS Psed_1829 NC_015312.1 1931923 1933416 D PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; manually curated; KEGG: ami:Amir_6009 glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; glutamyl-tRNA synthetase 1931923..1933416 Pseudonocardia dioxanivorans CB1190 10363656 YP_004331917.1 CDS Psed_1830 NC_015312.1 1933858 1935615 R PFAM: Heat shock protein 70; KEGG: amd:AMED_5168 chaperone protein DnaK-like protein; molecular chaperone DnaK complement(1933858..1935615) Pseudonocardia dioxanivorans CB1190 10363659 YP_004331918.1 CDS Psed_1831 NC_015312.1 1935764 1936465 R KEGG: ami:Amir_6007 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(1935764..1936465) Pseudonocardia dioxanivorans CB1190 10363660 YP_004331919.1 CDS Psed_1832 NC_015312.1 1936548 1937966 D TIGRFAM: 3-isopropylmalate dehydratase, large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit; KEGG: ami:Amir_6006 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; 3-isopropylmalate dehydratase large subunit 1936548..1937966 Pseudonocardia dioxanivorans CB1190 10363661 YP_004331920.1 CDS Psed_1833 NC_015312.1 1938038 1938634 D TIGRFAM: 3-isopropylmalate dehydratase, small subunit; HAMAP: 3-isopropylmalate dehydratase, small subunit; KEGG: amd:AMED_1724 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit 1938038..1938634 Pseudonocardia dioxanivorans CB1190 10363662 YP_004331921.1 CDS Psed_1834 NC_015312.1 1938771 1939328 D KEGG: mul:MUL_1970 DNA-binding protein HU HupB-like protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 1938771..1939328 Pseudonocardia dioxanivorans CB1190 10363663 YP_004331922.1 CDS Psed_1835 NC_015312.1 1939382 1940320 R KEGG: amd:AMED_1727 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; NUDIX hydrolase complement(1939382..1940320) Pseudonocardia dioxanivorans CB1190 10363664 YP_004331923.1 CDS Psed_1836 NC_015312.1 1940328 1942853 R PFAM: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; HAMAP: Polyphosphate kinase; KEGG: amd:AMED_1728 polyphosphate kinase; polyphosphate kinase complement(1940328..1942853) Pseudonocardia dioxanivorans CB1190 10363665 YP_004331924.1 CDS Psed_1837 NC_015312.1 1942943 1943710 R TIGRFAM: 2-phospho-L-lactate guanylyltransferase, CofC; KEGG: amd:AMED_1729 hypothetical protein; 2-phospho-L-lactate guanylyltransferase CofC complement(1942943..1943710) Pseudonocardia dioxanivorans CB1190 10363666 YP_004331925.1 CDS Psed_1838 NC_015312.1 1943779 1944507 D KEGG: ami:Amir_5999 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1943779..1944507 Pseudonocardia dioxanivorans CB1190 10363667 YP_004331926.1 CDS Psed_1839 NC_015312.1 1944581 1945591 D KEGG: ami:Amir_5998 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); HAMAP: Glycerol-3-phosphate dehydrogenase, NAD-dependent; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; glycerol-3-phosphate dehydrogenase 1944581..1945591 Pseudonocardia dioxanivorans CB1190 10363668 YP_004331927.1 CDS Psed_1840 NC_015312.1 1945588 1946688 D KEGG: ami:Amir_5997 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; cystathionine gamma-lyase 1945588..1946688 Pseudonocardia dioxanivorans CB1190 10363669 YP_004331928.1 CDS Psed_1841 NC_015312.1 1946736 1946948 R hypothetical protein complement(1946736..1946948) Pseudonocardia dioxanivorans CB1190 10363670 YP_004331929.1 CDS Psed_1842 NC_015312.1 1947159 1947749 D KEGG: nml:Namu_1825 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 1947159..1947749 Pseudonocardia dioxanivorans CB1190 10363671 YP_004331930.1 CDS Psed_1843 NC_015312.1 1947877 1949259 D PFAM: Protein of unknown function DUF2252; KEGG: rop:ROP_05540 hypothetical protein; hypothetical protein 1947877..1949259 Pseudonocardia dioxanivorans CB1190 10363672 YP_004331931.1 CDS Psed_1844 NC_015312.1 1949851 1951368 D TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: sen:SACE_3176 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1949851..1951368 Pseudonocardia dioxanivorans CB1190 10363673 YP_004331932.1 CDS Psed_1845 NC_015312.1 1951379 1952725 D KEGG: rop:ROP_57920 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; glutamate-1-semialdehyde 2,1-aminomutase 1951379..1952725 Pseudonocardia dioxanivorans CB1190 10363674 YP_004331933.1 CDS Psed_1846 NC_015312.1 1952901 1954556 D PFAM: Lipopolysaccharide biosynthesis; KEGG: amd:AMED_0549 exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1952901..1954556 Pseudonocardia dioxanivorans CB1190 10363675 YP_004331934.1 CDS Psed_1847 NC_015312.1 1954553 1957186 D PFAM: Lipopolysaccharide biosynthesis; KEGG: amd:AMED_0550 exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1954553..1957186 Pseudonocardia dioxanivorans CB1190 10363676 YP_004331935.1 CDS Psed_1848 NC_015312.1 1957189 1958514 D TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: sro:Sros_0655 GDP-mannose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 1957189..1958514 Pseudonocardia dioxanivorans CB1190 10363677 YP_004331936.1 CDS Psed_1849 NC_015312.1 1958529 1961678 D TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: sco:SCO0386 asparagine synthetase; PFAM: Asparagine synthase; Glycosyl transferase, group 1; Glutamine amidotransferase, class-II; asparagine synthase 1958529..1961678 Pseudonocardia dioxanivorans CB1190 10363678 YP_004331937.1 CDS Psed_1850 NC_015312.1 1961675 1963882 D PFAM: Oxidoreductase, N-terminal; Alcohol dehydrogenase, C-terminal; Oxidoreductase, C-terminal; KEGG: amd:AMED_0552 oxidoreductase; oxidoreductase domain-containing protein 1961675..1963882 Pseudonocardia dioxanivorans CB1190 10363679 YP_004331938.1 CDS Psed_1851 NC_015312.1 1963879 1965867 D PFAM: Heparinase II/III-like; KEGG: sco:SCO0388 hypothetical protein; heparinase II/III family protein 1963879..1965867 Pseudonocardia dioxanivorans CB1190 10363680 YP_004331939.1 CDS Psed_1852 NC_015312.1 1965864 1967420 D KEGG: amd:AMED_0554 lipoprotein; lipoprotein 1965864..1967420 Pseudonocardia dioxanivorans CB1190 10363681 YP_004331940.1 CDS Psed_1853 NC_015312.1 1967422 1968684 D KEGG: amd:AMED_0555 hypothetical protein; hypothetical protein 1967422..1968684 Pseudonocardia dioxanivorans CB1190 10363682 YP_004331941.1 CDS Psed_1854 NC_015312.1 1968681 1969919 D PFAM: Glycosyl transferase, group 1; KEGG: sco:SCO0391 transferase; group 1 glycosyl transferase 1968681..1969919 Pseudonocardia dioxanivorans CB1190 10363683 YP_004331942.1 CDS Psed_1855 NC_015312.1 1969948 1970523 R KEGG: chl:Chy400_1601 transferase hexapeptide repeat containing protein; hypothetical protein complement(1969948..1970523) Pseudonocardia dioxanivorans CB1190 10363684 YP_004331943.1 CDS Psed_1856 NC_015312.1 1970520 1971800 R PFAM: Polysaccharide pyruvyl transferase; KEGG: amd:AMED_0562 hypothetical protein; polysaccharide pyruvyl transferase complement(1970520..1971800) Pseudonocardia dioxanivorans CB1190 10363685 YP_004331944.1 CDS Psed_1857 NC_015312.1 1971797 1972753 R PFAM: Glycosyl transferase, family 2; KEGG: amd:AMED_0563 glycosyltransferase; family 2 glycosyl transferase complement(1971797..1972753) Pseudonocardia dioxanivorans CB1190 10363686 YP_004331945.1 CDS Psed_1858 NC_015312.1 1972750 1974336 R PFAM: Polysaccharide biosynthesis protein; KEGG: sco:SCO0397 integral membrane protein; polysaccharide biosynthesis protein complement(1972750..1974336) Pseudonocardia dioxanivorans CB1190 10363687 YP_004331946.1 CDS Psed_1859 NC_015312.1 1974504 1975274 R PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: amd:AMED_0557 integral membrane protein; phosphoesterase PA-phosphatase-like protein complement(1974504..1975274) Pseudonocardia dioxanivorans CB1190 10363688 YP_004331947.1 CDS Psed_1860 NC_015312.1 1975342 1976169 R KEGG: sco:SCO0393 transferase; Glucose-1-phosphate cytidylyltransferase complement(1975342..1976169) Pseudonocardia dioxanivorans CB1190 10363689 YP_004331948.1 CDS Psed_1861 NC_015312.1 1976445 1976684 D KEGG: svi:Svir_11850 hypothetical protein; hypothetical protein 1976445..1976684 Pseudonocardia dioxanivorans CB1190 10363690 YP_004331949.1 CDS Psed_1862 NC_015312.1 1976671 1977204 D PFAM: Protein of unknown function DUF477; KEGG: svi:Svir_11860 protein of unknown function (DUF477); hypothetical protein 1976671..1977204 Pseudonocardia dioxanivorans CB1190 10363691 YP_004331950.1 CDS Psed_1863 NC_015312.1 1977308 1978879 D KEGG: tfu:Tfu_2960 ATP-binding region, ATPase-like; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 1977308..1978879 Pseudonocardia dioxanivorans CB1190 10363692 YP_004331951.1 CDS Psed_1864 NC_015312.1 1979353 1980237 R KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein complement(1979353..1980237) Pseudonocardia dioxanivorans CB1190 10363693 YP_004331952.1 CDS Psed_1865 NC_015312.1 1980315 1982696 R TIGRFAM: Parallel beta-helix repeat-2; KEGG: dre:100006405 hypothetical LOC100006405; parallel beta-helix repeat-containing protein complement(1980315..1982696) Pseudonocardia dioxanivorans CB1190 10363694 YP_004331953.1 CDS Psed_1866 NC_015312.1 1982923 1984155 R PFAM: ATP-grasp fold, DUF201-type; KEGG: hje:HacjB3_10435 ATP-grasp protein-like protein; ATP-grasp fold domain-containing protein complement(1982923..1984155) Pseudonocardia dioxanivorans CB1190 10363695 YP_004331954.1 CDS Psed_1867 NC_015312.1 1984281 1984973 R KEGG: amd:AMED_6941 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(1984281..1984973) Pseudonocardia dioxanivorans CB1190 10363696 YP_004331955.1 CDS Psed_1868 NC_015312.1 1985094 1986449 R KEGG: amd:AMED_6942 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase complement(1985094..1986449) Pseudonocardia dioxanivorans CB1190 10363697 YP_004331956.1 CDS Psed_1869 NC_015312.1 1986569 1987630 D KEGG: tbi:Tbis_1928 polysaccharide biosynthesis protein CelD; polysaccharide biosynthesis protein CelD 1986569..1987630 Pseudonocardia dioxanivorans CB1190 10363698 YP_004331957.1 CDS Psed_1870 NC_015312.1 1987767 1988753 R PFAM: Polysaccharide deacetylase; KEGG: plm:Plim_0677 polysaccharide deacetylase; polysaccharide deacetylase complement(1987767..1988753) Pseudonocardia dioxanivorans CB1190 10363699 YP_004331958.1 CDS Psed_1871 NC_015312.1 1988835 1989602 R PFAM: Polysaccharide deacetylase; KEGG: sen:SACE_3921 polysaccharide deacetylase; polysaccharide deacetylase complement(1988835..1989602) Pseudonocardia dioxanivorans CB1190 10363700 YP_004331959.1 CDS Psed_1872 NC_015312.1 1989646 1990821 R PFAM: Glycosyl transferase, group 1; KEGG: msp:Mspyr1_46690 glycosyltransferase; group 1 glycosyl transferase complement(1989646..1990821) Pseudonocardia dioxanivorans CB1190 10363701 YP_004331960.1 CDS Psed_1873 NC_015312.1 1991059 1992321 D KEGG: ppd:Ppro_2168 ATP-grasp enzyme-like protein; ATP-grasp enzyme-like protein 1991059..1992321 Pseudonocardia dioxanivorans CB1190 10363702 YP_004331961.1 CDS Psed_1874 NC_015312.1 1992377 1993525 R KEGG: ote:Oter_0060 hypothetical protein; hypothetical protein complement(1992377..1993525) Pseudonocardia dioxanivorans CB1190 10363703 YP_004331962.1 CDS Psed_1875 NC_015312.1 1994012 1995019 R KEGG: chl:Chy400_1771 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase complement(1994012..1995019) Pseudonocardia dioxanivorans CB1190 10363704 YP_004331963.1 CDS Psed_1876 NC_015312.1 1995051 1997075 R PFAM: O-antigen ligase-related; KEGG: msp:Mspyr1_46700 lipid A core-O-antigen ligase-like enyme; O-antigen polymerase complement(1995051..1997075) Pseudonocardia dioxanivorans CB1190 10363705 YP_004331964.1 CDS Psed_1877 NC_015312.1 1997150 1998106 R PFAM: Lipopolysaccharide biosynthesis; KEGG: msp:Mspyr1_46710 hypothetical protein; lipopolysaccharide biosynthesis protein complement(1997150..1998106) Pseudonocardia dioxanivorans CB1190 10363706 YP_004331965.1 CDS Psed_1878 NC_015312.1 1998116 1999327 R PFAM: Glycosyl transferase, group 1; KEGG: nml:Namu_3529 group 1 glycosyl transferase; group 1 glycosyl transferase complement(1998116..1999327) Pseudonocardia dioxanivorans CB1190 10363707 YP_004331966.1 CDS Psed_1879 NC_015312.1 1999320 2000849 R TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: gob:Gobs_0418 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(1999320..2000849) Pseudonocardia dioxanivorans CB1190 10363708 YP_004331967.1 CDS Psed_1880 NC_015312.1 2001322 2002365 D PFAM: Glycosyl transferase, family 2; KEGG: nml:Namu_3183 family 2 glycosyl transferase; family 2 glycosyl transferase 2001322..2002365 Pseudonocardia dioxanivorans CB1190 10363709 YP_004331968.1 CDS Psed_1881 NC_015312.1 2002593 2003732 D PFAM: Glycosyl transferase, group 1; KEGG: nml:Namu_3530 group 1 glycosyl transferase; group 1 glycosyl transferase 2002593..2003732 Pseudonocardia dioxanivorans CB1190 10363710 YP_004331969.1 CDS Psed_1882 NC_015312.1 2003897 2008030 D PFAM: Polysaccharide biosynthesis protein; KEGG: rop:ROP_57940 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2003897..2008030 Pseudonocardia dioxanivorans CB1190 10363711 YP_004331970.1 CDS Psed_1883 NC_015312.1 2008859 2009671 R PFAM: Polysaccharide deacetylase; KEGG: mrd:Mrad2831_4617 polysaccharide deacetylase; polysaccharide deacetylase complement(2008859..2009671) Pseudonocardia dioxanivorans CB1190 10363712 YP_004331971.1 CDS Psed_1884 NC_015312.1 2009704 2010804 R PFAM: Glycosyl transferase, family 2; KEGG: cai:Caci_8495 glycosyl transferase 2; family 2 glycosyl transferase complement(2009704..2010804) Pseudonocardia dioxanivorans CB1190 10363713 YP_004331972.1 CDS Psed_1885 NC_015312.1 2010801 2011370 R KEGG: ami:Amir_1738 N-acetylglucosamine-1-phosphateuridyltransferase-like protein; N-acetylglucosamine-1-phosphate uridyltransferase complement(2010801..2011370) Pseudonocardia dioxanivorans CB1190 10363714 YP_004331973.1 CDS Psed_1886 NC_015312.1 2011639 2012748 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ami:Amir_1737 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(2011639..2012748) Pseudonocardia dioxanivorans CB1190 10363715 YP_004331974.1 CDS Psed_1887 NC_015312.1 2012745 2013905 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cai:Caci_8499 glutamine--scyllo-inositol transaminase; DegT/DnrJ/EryC1/StrS aminotransferase complement(2012745..2013905) Pseudonocardia dioxanivorans CB1190 10363716 YP_004331975.1 CDS Psed_1888 NC_015312.1 2013902 2015020 R PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: ami:Amir_1731 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(2013902..2015020) Pseudonocardia dioxanivorans CB1190 10363717 YP_004331976.1 CDS Psed_1889 NC_015312.1 2015197 2016156 R KEGG: cwo:Cwoe_5315 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase complement(2015197..2016156) Pseudonocardia dioxanivorans CB1190 10363718 YP_004331977.1 CDS Psed_1890 NC_015312.1 2016168 2016860 R PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: scb:SCAB_23551 integral membrane protein; phosphoesterase PA-phosphatase-like protein complement(2016168..2016860) Pseudonocardia dioxanivorans CB1190 10363719 YP_004331978.1 CDS Psed_1891 NC_015312.1 2016875 2019466 R TIGRFAM: Peptidase M1, aminopeptidase N actinomycete-type; KEGG: ami:Amir_1142 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; aminopeptidase complement(2016875..2019466) Pseudonocardia dioxanivorans CB1190 10363720 YP_004331979.1 CDS Psed_1892 NC_015312.1 2019552 2020649 R PFAM: C-methyltransferase; Methyltransferase hyptothetical; KEGG: gob:Gobs_0365 C-methyltransferase; C-methyltransferase complement(2019552..2020649) Pseudonocardia dioxanivorans CB1190 10363721 YP_004331980.1 CDS Psed_1893 NC_015312.1 2020702 2021244 D KEGG: sro:Sros_0651 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; dTDP-4-dehydrorhamnose 3,5-epimerase 2020702..2021244 Pseudonocardia dioxanivorans CB1190 10363722 YP_004331981.1 CDS Psed_1894 NC_015312.1 2021255 2022280 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: sro:Sros_0638 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase complement(2021255..2022280) Pseudonocardia dioxanivorans CB1190 10363723 YP_004331982.1 CDS Psed_1895 NC_015312.1 2022302 2022967 R PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: amd:AMED_0567 LmbE family protein; LmbE family protein complement(2022302..2022967) Pseudonocardia dioxanivorans CB1190 10363724 YP_004331983.1 CDS Psed_1896 NC_015312.1 2022967 2024262 R PFAM: C-methyltransferase; Methyltransferase hyptothetical; Methyltransferase type 12; KEGG: sro:Sros_0635 methyltransferase; C-methyltransferase complement(2022967..2024262) Pseudonocardia dioxanivorans CB1190 10363725 YP_004331984.1 CDS Psed_1897 NC_015312.1 2024477 2025103 D KEGG: sen:SACE_1340 DsbA oxidoreductase; DsbA oxidoreductase 2024477..2025103 Pseudonocardia dioxanivorans CB1190 10363726 YP_004331985.1 CDS Psed_1898 NC_015312.1 2025199 2025633 R KEGG: sno:Snov_2020 signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein complement(2025199..2025633) Pseudonocardia dioxanivorans CB1190 10363727 YP_004331986.1 CDS Psed_1899 NC_015312.1 2025875 2027299 D PFAM: Aldehyde dehydrogenase domain; KEGG: sen:SACE_1341 aldehyde dehydrogenase; aldehyde dehydrogenase 2025875..2027299 Pseudonocardia dioxanivorans CB1190 10363728 YP_004331987.1 CDS Psed_1900 NC_015312.1 2027450 2028988 D PFAM: Serine/threonine-protein kinase-like domain; KEGG: nfa:nfa31920 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 2027450..2028988 Pseudonocardia dioxanivorans CB1190 10363729 YP_004331988.1 CDS Psed_1901 NC_015312.1 2029012 2030943 R KEGG: fal:FRAAL4487 acylaminoacyl-peptidase; acylaminoacyl-peptidase complement(2029012..2030943) Pseudonocardia dioxanivorans CB1190 10363730 YP_004331989.1 CDS Psed_1902 NC_015312.1 2030944 2032725 R KEGG: sro:Sros_3531 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: Asparagine synthase amidotransferase; Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase complement(2030944..2032725) Pseudonocardia dioxanivorans CB1190 10363731 YP_004331990.1 CDS Psed_1903 NC_015312.1 2032764 2035325 R TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase, predicted; KEGG: fre:Franean1_2292 hypothetical protein; PFAM: Domain of unknown function DUF404; Glutamate--cysteine ligase, GCS2; Domain of unknown function DUF407; carboxylate-amine ligase ybdK complement(2032764..2035325) Pseudonocardia dioxanivorans CB1190 10363732 YP_004331991.1 CDS Psed_1904 NC_015312.1 2035471 2036061 R TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; KEGG: sti:Sthe_3243 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase-like hydrolase; haloacid dehalogenase complement(2035471..2036061) Pseudonocardia dioxanivorans CB1190 10363733 YP_004331992.1 CDS Psed_1906 NC_015312.1 2036717 2037490 R KEGG: sen:SACE_1347 metallo-beta-lactamase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(2036717..2037490) Pseudonocardia dioxanivorans CB1190 10363735 YP_004331993.1 CDS Psed_1907 NC_015312.1 2038244 2039965 R KEGG: mgi:Mflv_1504 hypothetical protein; hypothetical protein complement(2038244..2039965) Pseudonocardia dioxanivorans CB1190 10363736 YP_004331994.1 CDS Psed_1908 NC_015312.1 2040321 2040863 D KEGG: rer:RER_47870 hypothetical protein; hypothetical protein 2040321..2040863 Pseudonocardia dioxanivorans CB1190 10363737 YP_004331995.1 CDS Psed_1909 NC_015312.1 2040985 2041653 R KEGG: gob:Gobs_1550 hypothetical protein; hypothetical protein complement(2040985..2041653) Pseudonocardia dioxanivorans CB1190 10363738 YP_004331996.1 CDS Psed_1910 NC_015312.1 2041670 2042143 D TIGRFAM: Ribose 5-phosphate isomerase, actinobacteria; Ribose/galactose isomerase; KEGG: gbr:Gbro_2041 ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; ribose 5-phosphate isomerase 2041670..2042143 Pseudonocardia dioxanivorans CB1190 10363739 YP_004331997.1 CDS Psed_1911 NC_015312.1 2042147 2042983 D PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase, catalytic domain; KEGG: sen:SACE_1351 formamidopyrimidine-DNA glycosylase; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-(apurinic or apyrimidinic site) lyase 2042147..2042983 Pseudonocardia dioxanivorans CB1190 10363740 YP_004331998.1 CDS Psed_1912 NC_015312.1 2043128 2043901 R KEGG: ami:Amir_1148 hypothetical protein; hypothetical protein complement(2043128..2043901) Pseudonocardia dioxanivorans CB1190 10363741 YP_004331999.1 CDS Psed_1913 NC_015312.1 2044268 2045257 R KEGG: mrd:Mrad2831_6081 hypothetical protein; hypothetical protein complement(2044268..2045257) Pseudonocardia dioxanivorans CB1190 10363742 YP_004332000.1 CDS Psed_1914 NC_015312.1 2045381 2045566 D hypothetical protein 2045381..2045566 Pseudonocardia dioxanivorans CB1190 10363743 YP_004332001.1 CDS Psed_1915 NC_015312.1 2045763 2046626 D KEGG: svi:Svir_26660 hypothetical protein; hypothetical protein 2045763..2046626 Pseudonocardia dioxanivorans CB1190 10363744 YP_004332002.1 CDS Psed_1916 NC_015312.1 2046629 2048395 D KEGG: tcu:Tcur_1929 carnitine O-acetyltransferase; PFAM: Acyltransferase ChoActase/COT/CPT; carnitine O-acetyltransferase 2046629..2048395 Pseudonocardia dioxanivorans CB1190 10363745 YP_004332003.1 CDS Psed_1917 NC_015312.1 2048388 2049272 D KEGG: sma:SAV_542 hypothetical protein; hypothetical protein 2048388..2049272 Pseudonocardia dioxanivorans CB1190 10363746 YP_004332004.1 CDS Psed_1918 NC_015312.1 2049234 2050169 R KEGG: kfl:Kfla_1162 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-G type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(2049234..2050169) Pseudonocardia dioxanivorans CB1190 10363747 YP_004332005.1 CDS Psed_1919 NC_015312.1 2050209 2050943 R PFAM: Protein of unknown function DUF899, thioredoxin-like; KEGG: cwo:Cwoe_4051 protein of unknown function DUF899 thioredoxin family protein; hypothetical protein complement(2050209..2050943) Pseudonocardia dioxanivorans CB1190 10363748 YP_004332006.1 CDS Psed_1920 NC_015312.1 2051144 2051968 D PFAM: Class II aldolase/adducin, N-terminal; KEGG: sus:Acid_5617 hypothetical protein; class II aldolase/adducin family protein 2051144..2051968 Pseudonocardia dioxanivorans CB1190 10363749 YP_004332007.1 CDS Psed_1921 NC_015312.1 2051965 2052735 R KEGG: sen:SACE_3972 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(2051965..2052735) Pseudonocardia dioxanivorans CB1190 10363750 YP_004332008.1 CDS Psed_1922 NC_015312.1 2052789 2053958 D PFAM: Major facilitator superfamily MFS-1; KEGG: mab:MAB_1338 membrane efflux protein; major facilitator superfamily protein 2052789..2053958 Pseudonocardia dioxanivorans CB1190 10363751 YP_004332009.1 CDS Psed_1923 NC_015312.1 2053969 2055009 R TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: apv:Apar_0653 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase complement(2053969..2055009) Pseudonocardia dioxanivorans CB1190 10363752 YP_004332010.1 CDS Psed_1925 NC_015312.1 2055898 2056833 R PFAM: HTH transcriptional regulator, LysR; KEGG: fri:FraEuI1c_3185 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2055898..2056833) Pseudonocardia dioxanivorans CB1190 10363754 YP_004332011.1 CDS Psed_1927 NC_015312.1 2058794 2059150 R KEGG: nda:Ndas_2113 hypothetical protein; hypothetical protein complement(2058794..2059150) Pseudonocardia dioxanivorans CB1190 10363756 YP_004332012.1 CDS Psed_1928 NC_015312.1 2059396 2059845 D hypothetical protein 2059396..2059845 Pseudonocardia dioxanivorans CB1190 10363758 YP_004332013.1 CDS Psed_1929 NC_015312.1 2059895 2060680 D KEGG: afo:Afer_1999 hypothetical protein; hypothetical protein 2059895..2060680 Pseudonocardia dioxanivorans CB1190 10363759 YP_004332014.1 CDS Psed_1930 NC_015312.1 2061077 2061655 D PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: mau:Micau_1997 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 2061077..2061655 Pseudonocardia dioxanivorans CB1190 10363761 YP_004332015.1 CDS Psed_1931 NC_015312.1 2061670 2062434 R SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: sna:Snas_2706 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2061670..2062434) Pseudonocardia dioxanivorans CB1190 10363762 YP_004332016.1 CDS Psed_1932 NC_015312.1 2062431 2063021 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: req:REQ_47330 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2062431..2063021) Pseudonocardia dioxanivorans CB1190 10363763 YP_004332017.1 CDS Psed_1933 NC_015312.1 2063052 2063732 R PFAM: ABC transporter-like; KEGG: rer:RER_51400 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(2063052..2063732) Pseudonocardia dioxanivorans CB1190 10363764 YP_004332018.1 CDS Psed_1934 NC_015312.1 2063729 2064856 R PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mau:Micau_3733 hypothetical protein; hypothetical protein complement(2063729..2064856) Pseudonocardia dioxanivorans CB1190 10363765 YP_004332019.1 CDS Psed_1935 NC_015312.1 2065078 2065434 D KEGG: kfl:Kfla_1240 hypothetical protein; hypothetical protein 2065078..2065434 Pseudonocardia dioxanivorans CB1190 10363766 YP_004332020.1 CDS Psed_1936 NC_015312.1 2065441 2066364 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sco:SCO7666 zinc-binding oxidoreductase (fragment); SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(2065441..2066364) Pseudonocardia dioxanivorans CB1190 10363767 YP_004332021.1 CDS Psed_1937 NC_015312.1 2066394 2067032 R TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: rha:RHA1_ro07109 cyanamide hydratase; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase complement(2066394..2067032) Pseudonocardia dioxanivorans CB1190 10363768 YP_004332022.1 CDS Psed_1938 NC_015312.1 2067229 2068206 D KEGG: rha:RHA1_ro07108 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; SMART: Helix-turn-helix, AraC type, DNA binding domain; ThiJ/PfpI domain-containing protein 2067229..2068206 Pseudonocardia dioxanivorans CB1190 10363769 YP_004332023.1 CDS Psed_1939 NC_015312.1 2068233 2068949 R KEGG: axy:AXYL_00827 hypothetical protein; hypothetical protein complement(2068233..2068949) Pseudonocardia dioxanivorans CB1190 10363770 YP_004332024.1 CDS Psed_1940 NC_015312.1 2069125 2070255 D PFAM: Protein of unknown function DUF2183; KEGG: tra:Trad_1218 hypothetical protein; hypothetical protein 2069125..2070255 Pseudonocardia dioxanivorans CB1190 10363771 YP_004332025.1 CDS Psed_1941 NC_015312.1 2070387 2070944 D KEGG: azc:AZC_0152 hypothetical protein; hypothetical protein 2070387..2070944 Pseudonocardia dioxanivorans CB1190 10363772 YP_004332026.1 CDS Psed_1942 NC_015312.1 2070967 2071527 R HAMAP: Peptidase A8, signal peptidase II; KEGG: rer:pREL1_0145 signal peptidase II; lipoprotein signal peptidase complement(2070967..2071527) Pseudonocardia dioxanivorans CB1190 10363773 YP_004332027.1 CDS Psed_1943 NC_015312.1 2071535 2072791 R KEGG: cyn:Cyan7425_0057 glycosyl transferase 28; PFAM: Glycosyl transferase, family 28; Sterol 3-beta-glucosyltransferase complement(2071535..2072791) Pseudonocardia dioxanivorans CB1190 10363774 YP_004332028.1 CDS Psed_1944 NC_015312.1 2072902 2073297 D hypothetical protein 2072902..2073297 Pseudonocardia dioxanivorans CB1190 10363775 YP_004332029.1 CDS Psed_1945 NC_015312.1 2073341 2073757 R PFAM: Uncharacterised protein family YphA; KEGG: mau:Micau_1938 DoxX family protein; DoxX family protein complement(2073341..2073757) Pseudonocardia dioxanivorans CB1190 10363776 YP_004332030.1 CDS Psed_1946 NC_015312.1 2073888 2074535 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mil:ML5_5247 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 2073888..2074535 Pseudonocardia dioxanivorans CB1190 10363777 YP_004332031.1 CDS Psed_1948 NC_015312.1 2076073 2076612 R PFAM: Protein of unknown function DUF1697; KEGG: cwo:Cwoe_4791 protein of unknown function DUF1697; hypothetical protein complement(2076073..2076612) Pseudonocardia dioxanivorans CB1190 10363779 YP_004332032.1 CDS Psed_1949 NC_015312.1 2076636 2077835 R PFAM: CoA-transferase III; KEGG: fri:FraEuI1c_2687 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2076636..2077835) Pseudonocardia dioxanivorans CB1190 10363780 YP_004332033.1 CDS Psed_1950 NC_015312.1 2078032 2078673 D KEGG: ami:Amir_4801 SNARE associated Golgi protein; hypothetical protein 2078032..2078673 Pseudonocardia dioxanivorans CB1190 10363781 YP_004332034.1 CDS Psed_1951 NC_015312.1 2078732 2078989 D hypothetical protein 2078732..2078989 Pseudonocardia dioxanivorans CB1190 10363782 YP_004332035.1 CDS Psed_1952 NC_015312.1 2079116 2079556 D KEGG: amd:AMED_8935 hypothetical protein; hypothetical protein 2079116..2079556 Pseudonocardia dioxanivorans CB1190 10363783 YP_004332036.1 CDS Psed_1953 NC_015312.1 2079898 2080905 D KEGG: amd:AMED_9175 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 2079898..2080905 Pseudonocardia dioxanivorans CB1190 10363784 YP_004332037.1 CDS Psed_1954 NC_015312.1 2080987 2082441 R TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: sen:SACE_3997 glutamate synthase, NADH/NADPH, small subunit 1; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, NADH/NADPH small subunit complement(2080987..2082441) Pseudonocardia dioxanivorans CB1190 10363785 YP_004332038.1 CDS Psed_1955 NC_015312.1 2082434 2087002 R KEGG: sen:SACE_3998 glutamate synthase(NADPH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; glutamate synthase complement(2082434..2087002) Pseudonocardia dioxanivorans CB1190 10363786 YP_004332039.1 CDS Psed_1956 NC_015312.1 2087389 2088258 D PFAM: FhuF/siderophore biosynthesis protein; KEGG: sro:Sros_5551 hypothetical protein; FhuF/siderophore biosynthesis protein 2087389..2088258 Pseudonocardia dioxanivorans CB1190 10363787 YP_004332040.1 CDS Psed_1957 NC_015312.1 2088204 2088611 R KEGG: sro:Sros_8027 hypothetical protein; hypothetical protein complement(2088204..2088611) Pseudonocardia dioxanivorans CB1190 10363788 YP_004332041.1 CDS Psed_1958 NC_015312.1 2088608 2089264 R KEGG: scb:SCAB_4341 hypothetical protein; hypothetical protein complement(2088608..2089264) Pseudonocardia dioxanivorans CB1190 10363789 YP_004332042.1 CDS Psed_1959 NC_015312.1 2089255 2090031 R KEGG: sgr:SGR_320 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(2089255..2090031) Pseudonocardia dioxanivorans CB1190 10363790 YP_004332043.1 CDS Psed_1960 NC_015312.1 2090157 2090330 D PFAM: CsbD-like; KEGG: nml:Namu_0307 CsbD family protein; CsbD family protein 2090157..2090330 Pseudonocardia dioxanivorans CB1190 10363791 YP_004332044.1 CDS Psed_1961 NC_015312.1 2090479 2090832 D KEGG: sen:SACE_1867 hypothetical protein; hypothetical protein 2090479..2090832 Pseudonocardia dioxanivorans CB1190 10363792 YP_004332045.1 CDS Psed_1962 NC_015312.1 2091116 2092600 D TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: sen:SACE_1359 cell division trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; trigger factor Tig 2091116..2092600 Pseudonocardia dioxanivorans CB1190 10363793 YP_004332046.1 CDS Psed_1963 NC_015312.1 2092890 2093549 D HAMAP: Peptidase S14, ClpP; KEGG: rer:RER_38150 ATP-dependent Clp protease proteolytic subunit; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit 2092890..2093549 Pseudonocardia dioxanivorans CB1190 10363794 YP_004332047.1 CDS Psed_1964 NC_015312.1 2093546 2094172 D HAMAP: Peptidase S14, ClpP; KEGG: ami:Amir_1153 endopeptidase Clp; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit 2093546..2094172 Pseudonocardia dioxanivorans CB1190 10363795 YP_004332048.1 CDS Psed_1965 NC_015312.1 2094347 2095627 D SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: ami:Amir_1154 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit ClpX 2094347..2095627 Pseudonocardia dioxanivorans CB1190 10363796 YP_004332049.1 CDS Psed_1966 NC_015312.1 2095902 2097107 R KEGG: fal:FRAAL3412 alpha-methylacyl-CoA racemase; PFAM: CoA-transferase III; formyl-CoA transferase complement(2095902..2097107) Pseudonocardia dioxanivorans CB1190 10363797 YP_004332050.1 CDS Psed_1967 NC_015312.1 2097263 2098672 D PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_6732 integral membrane transporter; major facilitator superfamily protein 2097263..2098672 Pseudonocardia dioxanivorans CB1190 10363798 YP_004332051.1 CDS Psed_1968 NC_015312.1 2098669 2098803 D KEGG: msm:MSMEG_2304 hypothetical protein; hypothetical protein 2098669..2098803 Pseudonocardia dioxanivorans CB1190 10363799 YP_004332052.1 CDS Psed_1971 NC_015312.1 2099849 2100349 R KEGG: nda:Ndas_0831 F420-dependent enzyme; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein complement(2099849..2100349) Pseudonocardia dioxanivorans CB1190 10363802 YP_004332053.1 CDS Psed_1972 NC_015312.1 2100389 2101105 D KEGG: mva:Mvan_5721 hypothetical protein; hypothetical protein 2100389..2101105 Pseudonocardia dioxanivorans CB1190 10363803 YP_004332054.1 CDS Psed_1973 NC_015312.1 2101148 2103772 D KEGG: sen:SACE_1384 valyl-tRNA synthetase; manually curated; TIGRFAM: Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; valyl-tRNA synthetase 2101148..2103772 Pseudonocardia dioxanivorans CB1190 10363804 YP_004332055.1 CDS Psed_1974 NC_015312.1 2103769 2105274 D TIGRFAM: Folylpolyglutamate synthetase; KEGG: rha:RHA1_ro01317 tetrahydrofolylpolyglutamate synthase; PFAM: Mur ligase, C-terminal; Mur ligase, central; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2103769..2105274 Pseudonocardia dioxanivorans CB1190 10363805 YP_004332056.1 CDS Psed_1975 NC_015312.1 2105271 2105681 D KEGG: svi:Svir_12380 hypothetical protein; hypothetical protein 2105271..2105681 Pseudonocardia dioxanivorans CB1190 10363806 YP_004332057.1 CDS Psed_1976 NC_015312.1 2105695 2106648 R KEGG: amd:AMED_7406 lysyl oxidase-like protein; lysyl oxidase-like protein complement(2105695..2106648) Pseudonocardia dioxanivorans CB1190 10363807 YP_004332058.1 CDS Psed_1977 NC_015312.1 2106838 2107248 D SMART: Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; KEGG: sen:SACE_1401 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 2106838..2107248 Pseudonocardia dioxanivorans CB1190 10363808 YP_004332059.1 CDS Psed_1978 NC_015312.1 2107471 2108394 D PFAM: ABC transporter-like; KEGG: ami:Amir_1173 ABC transporter related; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 2107471..2108394 Pseudonocardia dioxanivorans CB1190 10363809 YP_004332060.1 CDS Psed_1979 NC_015312.1 2108394 2109230 D PFAM: ABC-2 type transporter; KEGG: amd:AMED_6710 ABC transport system permease; ABC transporter 2108394..2109230 Pseudonocardia dioxanivorans CB1190 10363810 YP_004332061.1 CDS Psed_1980 NC_015312.1 2109227 2110060 D PFAM: ABC-2 type transporter; KEGG: amd:AMED_6709 ABC-2 type transporter; ABC transporter 2109227..2110060 Pseudonocardia dioxanivorans CB1190 10363811 YP_004332062.1 CDS Psed_1981 NC_015312.1 2110166 2110516 D PFAM: Cupin 2, conserved barrel; KEGG: mil:ML5_2039 cupin 2 conserved barrel domain protein; cupin 2110166..2110516 Pseudonocardia dioxanivorans CB1190 10363812 YP_004332063.1 CDS Psed_1982 NC_015312.1 2110643 2111434 D KEGG: svi:Svir_26400 hypothetical protein; hypothetical protein 2110643..2111434 Pseudonocardia dioxanivorans CB1190 10363813 YP_004332064.1 CDS Psed_1983 NC_015312.1 2111520 2112398 D TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: abo:ABO_0776 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; dihydrodipicolinate synthase 2111520..2112398 Pseudonocardia dioxanivorans CB1190 10363814 YP_004332065.1 CDS Psed_1984 NC_015312.1 2112567 2114522 D KEGG: sen:SACE_1403 Fe-S oxidoreductase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein 2112567..2114522 Pseudonocardia dioxanivorans CB1190 10363815 YP_004332066.1 CDS Psed_1985 NC_015312.1 2114515 2115069 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: srt:Srot_2543 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2114515..2115069 Pseudonocardia dioxanivorans CB1190 10363816 YP_004332067.1 CDS Psed_1986 NC_015312.1 2115097 2115867 D PFAM: Protein of unknown function DUF2344; KEGG: sen:SACE_1405 hypothetical protein; hypothetical protein 2115097..2115867 Pseudonocardia dioxanivorans CB1190 10363817 YP_004332068.1 CDS Psed_1987 NC_015312.1 2116047 2119649 D TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Translation initiation factor IF-2, N-terminal; Ribosomal protein S1, RNA-binding domain; KEGG: sen:SACE_1406 ribonuclease; SMART: RNA-binding domain, S1; ribonuclease, Rne/Rng family 2116047..2119649 Pseudonocardia dioxanivorans CB1190 10363818 YP_004332069.1 CDS Psed_1988 NC_015312.1 2119791 2120099 D TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: sen:SACE_1414 50S ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 2119791..2120099 Pseudonocardia dioxanivorans CB1190 10363819 YP_004332070.1 CDS Psed_1989 NC_015312.1 2120112 2120369 D TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: tpr:Tpau_1474 ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 2120112..2120369 Pseudonocardia dioxanivorans CB1190 10363820 YP_004332071.1 CDS Psed_1990 NC_015312.1 2120455 2122026 D TIGRFAM: GTP-binding protein Obg/CgtA; GTP-binding protein GTP1/OBG, C-terminal; HAMAP: GTP-binding protein Obg/CgtA; KEGG: svi:Svir_12520 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTP-binding protein GTP1/OBG, C-terminal; GTPase obg 2120455..2122026 Pseudonocardia dioxanivorans CB1190 10363821 YP_004332072.1 CDS Psed_1991 NC_015312.1 2122023 2123171 D KEGG: ami:Amir_1190 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; HAMAP: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; SMART: Pseudouridine synthase/archaeosine transglycosylase; glutamate 5-kinase 2122023..2123171 Pseudonocardia dioxanivorans CB1190 10363822 YP_004332073.1 CDS Psed_1992 NC_015312.1 2123331 2124581 D manually curated; KEGG: sro:Sros_6795 protein-L-isoaspartate(D-aspartate)O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2123331..2124581 Pseudonocardia dioxanivorans CB1190 10363823 YP_004332074.1 CDS Psed_1993 NC_015312.1 2124586 2126691 R TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; KEGG: ami:Amir_1193 ATP-dependent DNA helicase, RecQ family; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; ATP-dependent DNA helicase RecQ complement(2124586..2126691) Pseudonocardia dioxanivorans CB1190 10363824 YP_004332075.1 CDS Psed_1994 NC_015312.1 2126819 2127703 D KEGG: rha:RHA1_ro01299 hypothetical protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 2126819..2127703 Pseudonocardia dioxanivorans CB1190 10363825 YP_004332076.1 CDS Psed_1995 NC_015312.1 2127703 2129121 D PFAM: vWA containing CoxE-like; KEGG: rop:ROP_10200 hypothetical protein; von Willebrand factor A 2127703..2129121 Pseudonocardia dioxanivorans CB1190 10363826 YP_004332077.1 CDS Psed_1996 NC_015312.1 2129290 2129610 D KEGG: cwo:Cwoe_3384 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 2129290..2129610 Pseudonocardia dioxanivorans CB1190 10363827 YP_004332078.1 CDS Psed_1997 NC_015312.1 2129603 2129905 D PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: amd:AMED_0950 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 2129603..2129905 Pseudonocardia dioxanivorans CB1190 10363828 YP_004332079.1 CDS Psed_1998 NC_015312.1 2130012 2130365 D KEGG: sgr:SGR_1198 hypothetical protein; hypothetical protein 2130012..2130365 Pseudonocardia dioxanivorans CB1190 10363829 YP_004332080.1 CDS Psed_1999 NC_015312.1 2130429 2133752 D KEGG: sro:Sros_0735 ATPase-like protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 2130429..2133752 Pseudonocardia dioxanivorans CB1190 10363830 YP_004332081.1 CDS Psed_2000 NC_015312.1 2133763 2134434 R PFAM: Haemerythrin/HHE cation-binding motif; KEGG: sro:Sros_0736 hypothetical protein; hemerythrin HHE cation binding domain-containing protein complement(2133763..2134434) Pseudonocardia dioxanivorans CB1190 10363831 YP_004332082.1 CDS Psed_2001 NC_015312.1 2134676 2134999 D KEGG: sen:SACE_6240 hypothetical protein; hypothetical protein 2134676..2134999 Pseudonocardia dioxanivorans CB1190 10363832 YP_004332083.1 CDS Psed_2002 NC_015312.1 2135097 2135660 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_1576 TetR family transcriptional regulator; TetR family transcriptional regulator 2135097..2135660 Pseudonocardia dioxanivorans CB1190 10363833 YP_004332084.1 CDS Psed_2003 NC_015312.1 2135689 2136306 D KEGG: afw:Anae109_1653 alkylated DNA repair protein; alkylated DNA repair protein 2135689..2136306 Pseudonocardia dioxanivorans CB1190 10363834 YP_004332085.1 CDS Psed_2004 NC_015312.1 2136336 2136938 D PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; KEGG: sen:SACE_1428 nicotinate-nucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase 2136336..2136938 Pseudonocardia dioxanivorans CB1190 10363835 YP_004332086.1 CDS Psed_2005 NC_015312.1 2137014 2137436 D KEGG: ami:Amir_1198 iojap-like protein; TIGRFAM: Ribosome-associated, Iojap-like; PFAM: Ribosome-associated, Iojap-like; iojap family protein 2137014..2137436 Pseudonocardia dioxanivorans CB1190 10363836 YP_004332087.1 CDS Psed_2006 NC_015312.1 2137433 2138059 D KEGG: amd:AMED_6693 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 2137433..2138059 Pseudonocardia dioxanivorans CB1190 10363837 YP_004332088.1 CDS Psed_2007 NC_015312.1 2138056 2138835 D KEGG: ami:Amir_1200 hypothetical protein; hypothetical protein 2138056..2138835 Pseudonocardia dioxanivorans CB1190 10363838 YP_004332089.1 CDS Psed_2008 NC_015312.1 2138847 2139770 D KEGG: ami:Amir_1201 DegV family protein; TIGRFAM: DegV; PFAM: DegV; degV family protein 2138847..2139770 Pseudonocardia dioxanivorans CB1190 10363839 YP_004332090.1 CDS Psed_2009 NC_015312.1 2140196 2140981 D TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; PFAM: Soluble ligand binding domain; Helix-hairpin-helix motif; KEGG: nml:Namu_1518 competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1; competence protein ComEA 2140196..2140981 Pseudonocardia dioxanivorans CB1190 10363840 YP_004332091.1 CDS Psed_2011 NC_015312.1 2143417 2144682 R TIGRFAM: Threonine synthase; KEGG: ami:Amir_1205 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase complement(2143417..2144682) Pseudonocardia dioxanivorans CB1190 10363842 YP_004332092.1 CDS Psed_2012 NC_015312.1 2144900 2145928 D KEGG: svi:Svir_12630 hypothetical protein; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 2144900..2145928 Pseudonocardia dioxanivorans CB1190 10363843 YP_004332093.1 CDS Psed_2013 NC_015312.1 2146777 2147052 R TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: svi:Svir_12640 SSU ribosomal protein S20P; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 complement(2146777..2147052) Pseudonocardia dioxanivorans CB1190 10363844 YP_004332094.1 CDS Psed_2014 NC_015312.1 2147258 2148013 D PFAM: Alpha/beta hydrolase fold-1; KEGG: gob:Gobs_3876 alpha/beta hydrolase fold protein; alpha/beta hydrolase 2147258..2148013 Pseudonocardia dioxanivorans CB1190 10363845 YP_004332095.1 CDS Psed_2015 NC_015312.1 2148036 2149841 R PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; NHL repeat; KEGG: krh:KRH_03700 hypothetical protein; alkyl hydroperoxide reductase complement(2148036..2149841) Pseudonocardia dioxanivorans CB1190 10363846 YP_004332096.1 CDS Psed_2016 NC_015312.1 2149938 2150756 R KEGG: rha:RHA1_ro05056 ABC transporter, ATP-binding component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(2149938..2150756) Pseudonocardia dioxanivorans CB1190 10363847 YP_004332097.1 CDS Psed_2017 NC_015312.1 2150820 2151626 D PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: kra:Krad_0151 DNA-(apurinic or apyrimidinic site) lyase; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-formamidopyrimidine glycosylase 2150820..2151626 Pseudonocardia dioxanivorans CB1190 10363848 YP_004332098.1 CDS Psed_2018 NC_015312.1 2151748 2152569 R KEGG: nml:Namu_1164 PA-phosphatase-like phosphoesterase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein complement(2151748..2152569) Pseudonocardia dioxanivorans CB1190 10363849 YP_004332099.1 CDS Psed_2019 NC_015312.1 2152613 2154277 R HAMAP: Phosphoglucose isomerase (PGI); KEGG: jde:Jden_0370 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase complement(2152613..2154277) Pseudonocardia dioxanivorans CB1190 10363850 YP_004332100.1 CDS Psed_2020 NC_015312.1 2154325 2154681 D hypothetical protein 2154325..2154681 Pseudonocardia dioxanivorans CB1190 10363851 YP_004332101.1 CDS Psed_2021 NC_015312.1 2155002 2155820 D PFAM: Uncharacterised protein family YphA; KEGG: sro:Sros_7264 membrane protein-like protein; DoxX family protein 2155002..2155820 Pseudonocardia dioxanivorans CB1190 10363852 YP_004332102.1 CDS Psed_2022 NC_015312.1 2155932 2156771 D KEGG: nda:Ndas_1956 hypothetical protein; hypothetical protein 2155932..2156771 Pseudonocardia dioxanivorans CB1190 10363853 YP_004332103.1 CDS Psed_2023 NC_015312.1 2156777 2157199 D KEGG: gob:Gobs_1065 hypothetical protein; hypothetical protein 2156777..2157199 Pseudonocardia dioxanivorans CB1190 10363854 YP_004332104.1 CDS Psed_2024 NC_015312.1 2157246 2158310 D PFAM: Aminoglycoside phosphotransferase; KEGG: fre:Franean1_6920 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2157246..2158310 Pseudonocardia dioxanivorans CB1190 10363855 YP_004332105.1 CDS Psed_2025 NC_015312.1 2158468 2159082 D KEGG: amd:AMED_5932 hypothetical protein; hypothetical protein 2158468..2159082 Pseudonocardia dioxanivorans CB1190 10363856 YP_004332106.1 CDS Psed_2026 NC_015312.1 2159163 2160584 R TIGRFAM: Glutamate decarboxylase; KEGG: nfa:nfa35400 glutamate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; glutamate decarboxylase complement(2159163..2160584) Pseudonocardia dioxanivorans CB1190 10363857 YP_004332107.1 CDS Psed_2027 NC_015312.1 2160609 2161874 D PFAM: Uncharacterised conserved protein UCP012608; KEGG: svi:Svir_06550 hypothetical protein; hypothetical protein 2160609..2161874 Pseudonocardia dioxanivorans CB1190 10363858 YP_004332108.1 CDS Psed_2028 NC_015312.1 2161861 2162646 R PFAM: Polysaccharide deacetylase; KEGG: sma:SAV_81 oligosaccharide deacetylase; polysaccharide deacetylase complement(2161861..2162646) Pseudonocardia dioxanivorans CB1190 10363859 YP_004332109.1 CDS Psed_2029 NC_015312.1 2162713 2163615 R KEGG: gob:Gobs_2301 hypothetical protein; hypothetical protein complement(2162713..2163615) Pseudonocardia dioxanivorans CB1190 10363860 YP_004332110.1 CDS Psed_2030 NC_015312.1 2163661 2164986 R KEGG: gob:Gobs_2495 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase complement(2163661..2164986) Pseudonocardia dioxanivorans CB1190 10363861 YP_004332111.1 CDS Psed_2031 NC_015312.1 2165125 2166018 D PFAM: Metallo-dependent phosphatase; KEGG: fra:Francci3_1505 metallophosphoesterase; metallophosphoesterase 2165125..2166018 Pseudonocardia dioxanivorans CB1190 10363862 YP_004332112.1 CDS Psed_2032 NC_015312.1 2166062 2166313 R TIGRFAM: Ribosomal protein L31; HAMAP: Ribosomal protein L31; KEGG: amd:AMED_5005 large subunit ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 complement(2166062..2166313) Pseudonocardia dioxanivorans CB1190 10363863 YP_004332113.1 CDS Psed_2033 NC_015312.1 2166385 2167413 R PFAM: Periplasmic binding protein; KEGG: rer:RER_04570 iron-siderophore binding protein; ABC transporter substrate-binding protein complement(2166385..2167413) Pseudonocardia dioxanivorans CB1190 10363864 YP_004332114.1 CDS Psed_2034 NC_015312.1 2167595 2168980 D PFAM: Chloride channel, voltage gated; KEGG: afo:Afer_0254 chloride channel core; Cl- channel voltage-gated family protein 2167595..2168980 Pseudonocardia dioxanivorans CB1190 10363865 YP_004332115.1 CDS Psed_2035 NC_015312.1 2169130 2170383 R PFAM: Beta-lactamase-related; KEGG: mab:MAB_0330 beta-lactamase; beta-lactamase complement(2169130..2170383) Pseudonocardia dioxanivorans CB1190 10363866 YP_004332116.1 CDS Psed_2036 NC_015312.1 2170630 2171238 D PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sna:Snas_3554 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 2170630..2171238 Pseudonocardia dioxanivorans CB1190 10363867 YP_004332117.1 CDS Psed_2038 NC_015312.1 2172205 2172624 R PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: ami:Amir_2015 sporulation and cell division protein SsgA; sporulation and cell division protein SsgA complement(2172205..2172624) Pseudonocardia dioxanivorans CB1190 10363872 YP_004332118.1 CDS Psed_2039 NC_015312.1 2172867 2173523 D KEGG: ami:Amir_2016 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2172867..2173523 Pseudonocardia dioxanivorans CB1190 10363873 YP_004332119.1 CDS Psed_2040 NC_015312.1 2173520 2174491 D KEGG: gob:Gobs_3193 transmembrane anti-sigma factor; transmembrane anti-sigma factor 2173520..2174491 Pseudonocardia dioxanivorans CB1190 10363874 YP_004332120.1 CDS Psed_2042 NC_015312.1 2175242 2175973 R KEGG: rbi:RB2501_04000 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(2175242..2175973) Pseudonocardia dioxanivorans CB1190 10363877 YP_004332121.1 CDS Psed_2043 NC_015312.1 2176057 2176608 R PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: gob:Gobs_4877 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein complement(2176057..2176608) Pseudonocardia dioxanivorans CB1190 10363878 YP_004332122.1 CDS Psed_2044 NC_015312.1 2176595 2176975 R KEGG: gob:Gobs_4878 transcriptional regulator TrmB; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(2176595..2176975) Pseudonocardia dioxanivorans CB1190 10363879 YP_004332123.1 CDS Psed_2045 NC_015312.1 2177273 2178145 D PFAM: Major intrinsic protein; KEGG: nml:Namu_0790 major intrinsic protein; major intrinsic protein 2177273..2178145 Pseudonocardia dioxanivorans CB1190 10363880 YP_004332124.1 CDS Psed_2046 NC_015312.1 2178280 2179680 R TIGRFAM: Glutamate decarboxylase; KEGG: bav:BAV2797 glutamate decarboxylase alpha/beta; PFAM: Pyridoxal phosphate-dependent decarboxylase; glutamate decarboxylase complement(2178280..2179680) Pseudonocardia dioxanivorans CB1190 10363881 YP_004332125.1 CDS Psed_2047 NC_015312.1 2179867 2180859 D KEGG: nml:Namu_1376 hypothetical protein; hypothetical protein 2179867..2180859 Pseudonocardia dioxanivorans CB1190 10363882 YP_004332126.1 CDS Psed_2048 NC_015312.1 2180873 2181484 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: art:Arth_3112 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2180873..2181484) Pseudonocardia dioxanivorans CB1190 10363883 YP_004332127.1 CDS Psed_2049 NC_015312.1 2181557 2181877 D KEGG: art:Arth_3235 hypothetical protein; hypothetical protein 2181557..2181877 Pseudonocardia dioxanivorans CB1190 10363884 YP_004332128.1 CDS Psed_2050 NC_015312.1 2181884 2182846 R PFAM: Protein of unknown function DUF1707; KEGG: nfa:nfa55550 hypothetical protein; hypothetical protein complement(2181884..2182846) Pseudonocardia dioxanivorans CB1190 10363885 YP_004332129.1 CDS Psed_2051 NC_015312.1 2183104 2184513 D PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4982 integral membrane transport protein; major facilitator superfamily protein 2183104..2184513 Pseudonocardia dioxanivorans CB1190 10363886 YP_004332130.1 CDS Psed_2052 NC_015312.1 2184637 2186307 D KEGG: fri:FraEuI1c_4109 hydrolase CocE/NonD family protein; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein 2184637..2186307 Pseudonocardia dioxanivorans CB1190 10363887 YP_004332131.1 CDS Psed_2053 NC_015312.1 2186354 2187370 R KEGG: msm:MSMEG_5829 Dyp-type peroxidase; TIGRFAM: Dyp-type peroxidase; PFAM: Dyp-type peroxidase; dyp-type peroxidase protein complement(2186354..2187370) Pseudonocardia dioxanivorans CB1190 10363888 YP_004332132.1 CDS Psed_2054 NC_015312.1 2187523 2188533 R SMART: DNA helicase, ATP-dependent, Ku type; TIGRFAM: Ku, prokaryotic type; KEGG: sco:SCO0601 secreted protein; HAMAP: Ku, prokaryotic type; PFAM: DNA helicase, ATP-dependent, Ku type; DNA repair protein complement(2187523..2188533) Pseudonocardia dioxanivorans CB1190 10363889 YP_004332133.1 CDS Psed_2055 NC_015312.1 2188683 2189069 D KEGG: tpr:Tpau_2157 hypothetical protein; hypothetical protein 2188683..2189069 Pseudonocardia dioxanivorans CB1190 10363890 YP_004332134.1 CDS Psed_2056 NC_015312.1 2189313 2190641 R KEGG: fri:FraEuI1c_4558 nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Luciferase-like, subgroup; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase complement(2189313..2190641) Pseudonocardia dioxanivorans CB1190 10363891 YP_004332135.1 CDS Psed_2057 NC_015312.1 2190638 2191570 R KEGG: fre:Franean1_6909 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain; citryl-CoA lyase complement(2190638..2191570) Pseudonocardia dioxanivorans CB1190 10363892 YP_004332136.1 CDS Psed_2058 NC_015312.1 2191625 2192833 R KEGG: amd:AMED_7135 acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase III; formyl-CoA transferase complement(2191625..2192833) Pseudonocardia dioxanivorans CB1190 10363893 YP_004332137.1 CDS Psed_2059 NC_015312.1 2192830 2193906 R KEGG: bbr:BB2819 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator complement(2192830..2193906) Pseudonocardia dioxanivorans CB1190 10363894 YP_004332138.1 CDS Psed_2060 NC_015312.1 2194058 2194684 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0832 transcriptional regulator, TetR family; TetR family transcriptional regulator 2194058..2194684 Pseudonocardia dioxanivorans CB1190 10363895 YP_004332139.1 CDS Psed_2061 NC_015312.1 2194935 2196521 D KEGG: cwo:Cwoe_3882 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 2194935..2196521 Pseudonocardia dioxanivorans CB1190 10363896 YP_004332140.1 CDS Psed_2062 NC_015312.1 2196743 2197420 R PFAM: Crotonase, core; KEGG: ade:Adeh_1645 short chain enoyl-CoA hydratase; enoyl-CoA hydratase complement(2196743..2197420) Pseudonocardia dioxanivorans CB1190 10363897 YP_004332141.1 CDS Psed_2063 NC_015312.1 2197417 2198160 R PFAM: Crotonase, core; KEGG: ace:Acel_0400 short chain enoyl-CoA hydratase; enoyl-CoA hydratase complement(2197417..2198160) Pseudonocardia dioxanivorans CB1190 10363898 YP_004332142.1 CDS Psed_2064 NC_015312.1 2198382 2199542 D PFAM: Extracellular ligand-binding receptor; KEGG: bpt:Bpet2312 Leu/Ile/Val-binding protein precursor; ABC transporter substrate-binding protein 2198382..2199542 Pseudonocardia dioxanivorans CB1190 10363899 YP_004332143.1 CDS Psed_2065 NC_015312.1 2199664 2200719 D PFAM: ABC transporter permease; KEGG: slp:Slip_2360 inner-membrane translocator; ABC transporter permease 2199664..2200719 Pseudonocardia dioxanivorans CB1190 10363900 YP_004332144.1 CDS Psed_2066 NC_015312.1 2200716 2201486 D PFAM: ABC transporter-like; KEGG: mno:Mnod_0334 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 2200716..2201486 Pseudonocardia dioxanivorans CB1190 10363901 YP_004332145.1 CDS Psed_2067 NC_015312.1 2201483 2202190 D KEGG: msl:Msil_0063 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2201483..2202190 Pseudonocardia dioxanivorans CB1190 10363902 YP_004332146.1 CDS Psed_2068 NC_015312.1 2202194 2203060 D PFAM: ABC transporter permease; KEGG: sgo:SGO_1629 branched-chain amino acid permease; ABC transporter permease 2202194..2203060 Pseudonocardia dioxanivorans CB1190 10363903 YP_004332147.1 CDS Psed_2069 NC_015312.1 2203057 2203872 D KEGG: sai:Saci_1633 3-hydroxybutyryl-CoA dehydratase; PFAM: Crotonase, core; enoyl-CoA hydratase 2203057..2203872 Pseudonocardia dioxanivorans CB1190 10363904 YP_004332148.1 CDS Psed_2070 NC_015312.1 2203869 2204921 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: acp:A2cp1_3027 alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 2203869..2204921 Pseudonocardia dioxanivorans CB1190 10363905 YP_004332149.1 CDS Psed_2071 NC_015312.1 2204938 2206275 D PFAM: MmgE/PrpD; KEGG: bbr:BB4700 hypothetical protein; MmgE/PrpD family protein 2204938..2206275 Pseudonocardia dioxanivorans CB1190 10363906 YP_004332150.1 CDS Psed_2072 NC_015312.1 2206272 2206778 D KEGG: rha:RHA1_ro00762 hypothetical protein; hypothetical protein 2206272..2206778 Pseudonocardia dioxanivorans CB1190 10363907 YP_004332151.1 CDS Psed_2073 NC_015312.1 2206775 2207224 D PFAM: MaoC-like dehydratase; KEGG: mav:MAV_3005 MaoC like domain-containing protein; acyl dehydratase MaoC 2206775..2207224 Pseudonocardia dioxanivorans CB1190 10363908 YP_004332152.1 CDS Psed_2074 NC_015312.1 2207221 2208186 D KEGG: tro:trd_1493 TPP-dependent acetoin dehydrogenase alpha-subunit; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 2207221..2208186 Pseudonocardia dioxanivorans CB1190 10363909 YP_004332153.1 CDS Psed_2075 NC_015312.1 2208186 2209172 D PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: bpe:BP0628 pyruvate dehydrogenase E1 beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 2208186..2209172 Pseudonocardia dioxanivorans CB1190 10363910 YP_004332154.1 CDS Psed_2076 NC_015312.1 2209169 2209429 D PFAM: Biotin/lipoyl attachment; KEGG: mmr:Mmar10_2816 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; biotin/lipoyl attachment domain-containing protein 2209169..2209429 Pseudonocardia dioxanivorans CB1190 10363911 YP_004332155.1 CDS Psed_2077 NC_015312.1 2209458 2211008 D KEGG: drm:Dred_0576 crotonobetaine/carnitine-CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 2209458..2211008 Pseudonocardia dioxanivorans CB1190 10363912 YP_004332156.1 CDS Psed_2078 NC_015312.1 2211018 2211662 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0832 transcriptional regulator, TetR family; TetR family transcriptional regulator 2211018..2211662 Pseudonocardia dioxanivorans CB1190 10363913 YP_004332157.1 CDS Psed_2079 NC_015312.1 2211762 2213738 D KEGG: rop:ROP_25260 flavin-containing monooxygenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; 4-hydroxyacetophenone monooxygenase 2211762..2213738 Pseudonocardia dioxanivorans CB1190 10363914 YP_004332158.1 CDS Psed_2080 NC_015312.1 2213711 2214226 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ami:Amir_2775 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(2213711..2214226) Pseudonocardia dioxanivorans CB1190 10363915 YP_004332159.1 CDS Psed_2081 NC_015312.1 2214287 2216155 R PFAM: Helix-turn-helix, Fis-type; KEGG: rha:RHA1_ro10163 transcriptional regulator; Fis family transcriptional regulator complement(2214287..2216155) Pseudonocardia dioxanivorans CB1190 10363916 YP_004332160.1 CDS Psed_2082 NC_015312.1 2216340 2216633 D KEGG: nml:Namu_2338 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; microcompartments protein 2216340..2216633 Pseudonocardia dioxanivorans CB1190 10363917 YP_004332161.1 CDS Psed_2083 NC_015312.1 2216641 2218809 R KEGG: nml:Namu_2339 PucR family transcriptional regulator; PFAM: GAF; SMART: GAF; PucR family transcriptional regulator complement(2216641..2218809) Pseudonocardia dioxanivorans CB1190 10363918 YP_004332162.1 CDS Psed_2084 NC_015312.1 2218827 2219861 R KEGG: nml:Namu_2340 alcohol dehydrogenase GroES domain-containing protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES complement(2218827..2219861) Pseudonocardia dioxanivorans CB1190 10363919 YP_004332163.1 CDS Psed_2085 NC_015312.1 2219858 2221150 R HAMAP: Malate dehydrogenase, NAD-dependent; KEGG: nml:Namu_2341 lactate/malate dehydrogenase; PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal; malate dehydrogenase complement(2219858..2221150) Pseudonocardia dioxanivorans CB1190 10363920 YP_004332164.1 CDS Psed_2086 NC_015312.1 2221147 2221788 R KEGG: nml:Namu_2342 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; microcompartments protein complement(2221147..2221788) Pseudonocardia dioxanivorans CB1190 10363921 YP_004332165.1 CDS Psed_2087 NC_015312.1 2221785 2222651 R TIGRFAM: Ethanolamine utilisation EutJ; KEGG: nml:Namu_2343 ethanolamine utilization protein EutJ family protein; ethanolamine utilization protein EutJ family protein complement(2221785..2222651) Pseudonocardia dioxanivorans CB1190 10363922 YP_004332166.1 CDS Psed_2088 NC_015312.1 2222652 2224040 R KEGG: nml:Namu_2344 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; acetaldehyde dehydrogenase complement(2222652..2224040) Pseudonocardia dioxanivorans CB1190 10363923 YP_004332167.1 CDS Psed_2089 NC_015312.1 2224125 2224454 R KEGG: nml:Namu_2345 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; microcompartments protein complement(2224125..2224454) Pseudonocardia dioxanivorans CB1190 10363924 YP_004332168.1 CDS Psed_2090 NC_015312.1 2224493 2224786 R PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: nml:Namu_2346 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; ethanolamine utilization protein EutN/carboxysome structural protein Ccml complement(2224493..2224786) Pseudonocardia dioxanivorans CB1190 10363925 YP_004332169.1 CDS Psed_2091 NC_015312.1 2224982 2225989 D KEGG: nml:Namu_2347 hypothetical protein; hypothetical protein 2224982..2225989 Pseudonocardia dioxanivorans CB1190 10363926 YP_004332170.1 CDS Psed_2092 NC_015312.1 2225997 2226959 D PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nml:Namu_2348 haloacid dehalogenase domain-containing protein hydrolase; haloacid dehalogenase 2225997..2226959 Pseudonocardia dioxanivorans CB1190 10363927 YP_004332171.1 CDS Psed_2093 NC_015312.1 2226956 2227699 D KEGG: nml:Namu_2349 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 2226956..2227699 Pseudonocardia dioxanivorans CB1190 10363928 YP_004332172.1 CDS Psed_2094 NC_015312.1 2227738 2230203 R KEGG: nml:Namu_2357 pyruvate phosphate dikinase PEP/pyruvate-binding; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; pyruvate, phosphate dikinase complement(2227738..2230203) Pseudonocardia dioxanivorans CB1190 10363929 YP_004332173.1 CDS Psed_2095 NC_015312.1 2230200 2230820 R KEGG: nml:Namu_2358 hypothetical protein; hypothetical protein complement(2230200..2230820) Pseudonocardia dioxanivorans CB1190 10363930 YP_004332174.1 CDS Psed_2096 NC_015312.1 2230909 2232342 R KEGG: nml:Namu_2359 hypothetical protein; hypothetical protein complement(2230909..2232342) Pseudonocardia dioxanivorans CB1190 10363931 YP_004332175.1 CDS Psed_2097 NC_015312.1 2232357 2232776 R KEGG: nml:Namu_2360 hypothetical protein; hypothetical protein complement(2232357..2232776) Pseudonocardia dioxanivorans CB1190 10363932 YP_004332176.1 CDS Psed_2098 NC_015312.1 2233139 2233972 R HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: fal:FRAAL4216 bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD complement(2233139..2233972) Pseudonocardia dioxanivorans CB1190 10363933 YP_004332177.1 CDS Psed_2099 NC_015312.1 2233969 2234967 R KEGG: amd:AMED_2190 adenosine kinase; PFAM: Carbohydrate/purine kinase; adenosine kinase complement(2233969..2234967) Pseudonocardia dioxanivorans CB1190 10363934 YP_004332178.1 CDS Psed_2100 NC_015312.1 2234985 2235911 R TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: svi:Svir_11670 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase complement(2234985..2235911) Pseudonocardia dioxanivorans CB1190 10363935 YP_004332179.1 CDS Psed_2101 NC_015312.1 2235911 2237146 R PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; KEGG: cwo:Cwoe_3729 S-adenosylmethionine synthetase; S-adenosylmethionine synthase complement(2235911..2237146) Pseudonocardia dioxanivorans CB1190 10363936 YP_004332180.1 CDS Psed_2102 NC_015312.1 2237149 2238279 R KEGG: iag:Igag_0649 methionine synthase (B12-independent); PFAM: Methionine synthase, vitamin-B12 independent; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(2237149..2238279) Pseudonocardia dioxanivorans CB1190 10363937 YP_004332181.1 CDS Psed_2103 NC_015312.1 2238279 2239781 R KEGG: cwo:Cwoe_4355 hypothetical protein; hypothetical protein complement(2238279..2239781) Pseudonocardia dioxanivorans CB1190 10363938 YP_004332182.1 CDS Psed_2104 NC_015312.1 2239771 2240757 R PFAM: Methylenetetrahydrofolate reductase; KEGG: dbr:Deba_2153 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase complement(2239771..2240757) Pseudonocardia dioxanivorans CB1190 10363939 YP_004332183.1 CDS Psed_2105 NC_015312.1 2240754 2241326 R KEGG: ara:Arad_2827 hypothetical protein; hypothetical protein complement(2240754..2241326) Pseudonocardia dioxanivorans CB1190 10363940 YP_004332184.1 CDS Psed_2106 NC_015312.1 2241570 2242976 D PFAM: HTH transcriptional regulator, LysR; KEGG: rrs:RoseRS_0141 transcriptional regulator, CdaR; transcriptional regulator CdaR 2241570..2242976 Pseudonocardia dioxanivorans CB1190 10363941 YP_004332185.1 CDS Psed_2107 NC_015312.1 2242973 2244784 D KEGG: tro:trd_1049 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; PFAM: Homocysteine S-methyltransferase; Methylenetetrahydrofolate reductase; methionine synthase 2242973..2244784 Pseudonocardia dioxanivorans CB1190 10363942 YP_004332186.1 CDS Psed_2108 NC_015312.1 2244917 2246770 D PFAM: Acyltransferase 3; KEGG: rxy:Rxyl_2066 acyltransferase 3; acyltransferase 2244917..2246770 Pseudonocardia dioxanivorans CB1190 10363943 YP_004332187.1 CDS Psed_2109 NC_015312.1 2247117 2248361 D KEGG: sti:Sthe_1149 protein of unknown function DUF201; hypothetical protein 2247117..2248361 Pseudonocardia dioxanivorans CB1190 10363944 YP_004332188.1 CDS Psed_2110 NC_015312.1 2248387 2250402 R KEGG: req:REQ_42420 metallopeptidase; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal; neprilysin complement(2248387..2250402) Pseudonocardia dioxanivorans CB1190 10363945 YP_004332189.1 CDS Psed_2111 NC_015312.1 2250512 2251951 D PFAM: Major facilitator superfamily MFS-1; KEGG: nml:Namu_2999 major facilitator superfamily protein; major facilitator superfamily protein 2250512..2251951 Pseudonocardia dioxanivorans CB1190 10363946 YP_004332190.1 CDS Psed_2112 NC_015312.1 2251958 2252353 R PFAM: Cupin 2, conserved barrel; KEGG: ami:Amir_3902 cupin 2 conserved barrel domain protein; cupin complement(2251958..2252353) Pseudonocardia dioxanivorans CB1190 10363947 YP_004332191.1 CDS Psed_2113 NC_015312.1 2252460 2253167 R KEGG: fri:FraEuI1c_0640 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR complement(2252460..2253167) Pseudonocardia dioxanivorans CB1190 10363948 YP_004332192.1 CDS Psed_2114 NC_015312.1 2253164 2253349 R hypothetical protein complement(2253164..2253349) Pseudonocardia dioxanivorans CB1190 10363949 YP_004332193.1 CDS Psed_2115 NC_015312.1 2253611 2255713 R PFAM: Protein of unknown function DUF349; KEGG: ami:Amir_1442 protein of unknown function DUF349; hypothetical protein complement(2253611..2255713) Pseudonocardia dioxanivorans CB1190 10363950 YP_004332194.1 CDS Psed_2116 NC_015312.1 2255928 2256647 D KEGG: ami:Amir_1441 hypothetical protein; hypothetical protein 2255928..2256647 Pseudonocardia dioxanivorans CB1190 10363951 YP_004332195.1 CDS Psed_2117 NC_015312.1 2256644 2257639 D PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: ami:Amir_1440 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA dimethylallyltransferase 2256644..2257639 Pseudonocardia dioxanivorans CB1190 10363952 YP_004332196.1 CDS Psed_2118 NC_015312.1 2257645 2258520 D TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: ami:Amir_1439 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; diaminopimelate epimerase 2257645..2258520 Pseudonocardia dioxanivorans CB1190 10363953 YP_004332197.1 CDS Psed_2119 NC_015312.1 2258587 2260068 D KEGG: amd:AMED_2389 GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein HflX 2258587..2260068 Pseudonocardia dioxanivorans CB1190 10363954 YP_004332198.1 CDS Psed_2120 NC_015312.1 2260777 2261187 R KEGG: lma:LmjF35.0540 proteophosphoglycan 5; proteophosphoglycan 5 complement(2260777..2261187) Pseudonocardia dioxanivorans CB1190 10363955 YP_004332199.1 CDS Psed_2121 NC_015312.1 2261243 2261827 R KEGG: acp:A2cp1_0929 hypothetical protein; hypothetical protein complement(2261243..2261827) Pseudonocardia dioxanivorans CB1190 10363956 YP_004332200.1 CDS Psed_2122 NC_015312.1 2263591 2264322 R TIGRFAM: Peptidase S24, LexA repressor; HAMAP: Peptidase S24, LexA repressor; KEGG: gob:Gobs_3902 LexA family transcriptional regulator; PFAM: LexA, DNA-binding domain; Peptidase S24/S26A/S26B, conserved region; SOS-response transcriptional repressor, LexA complement(2263591..2264322) Pseudonocardia dioxanivorans CB1190 10363957 YP_004332201.1 CDS Psed_2123 NC_015312.1 2264897 2265472 D KEGG: amd:AMED_2392 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein 2264897..2265472 Pseudonocardia dioxanivorans CB1190 10363958 YP_004332202.1 CDS Psed_2124 NC_015312.1 2266095 2266574 D PFAM: ATP-cone; manually curated; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; KEGG: amd:AMED_2393 transcriptional regulator NrdR; HAMAP: Ribonucleotide reductase regulator NrdR-like; transcriptional repressor nrdR 2266095..2266574 Pseudonocardia dioxanivorans CB1190 10363959 YP_004332203.1 CDS Psed_2125 NC_015312.1 2266745 2269609 D TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: ami:Amir_1431 vitamin B12-dependent ribonucleotide reductase; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; Ribonucleotide reductase large subunit, C-terminal; ribonucleoside-diphosphate reductase 2266745..2269609 Pseudonocardia dioxanivorans CB1190 10363960 YP_004332204.1 CDS Psed_2126 NC_015312.1 2269847 2270842 R PFAM: Alpha/beta hydrolase fold-1; KEGG: sma:SAV_1746 hydrolase; alpha/beta hydrolase complement(2269847..2270842) Pseudonocardia dioxanivorans CB1190 10363961 YP_004332205.1 CDS Psed_2127 NC_015312.1 2270908 2271414 D PFAM: NUDIX hydrolase domain; KEGG: bcv:Bcav_2398 NUDIX hydrolase; NUDIX hydrolase 2270908..2271414 Pseudonocardia dioxanivorans CB1190 10363962 YP_004332206.1 CDS Psed_2129 NC_015312.1 2272424 2272636 R TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: mpa:MAP3992 hypothetical protein; excisionase complement(2272424..2272636) Pseudonocardia dioxanivorans CB1190 10363964 YP_004332207.1 CDS Psed_2130 NC_015312.1 2272846 2273538 D PFAM: Transglutaminase-like; KEGG: mgi:Mflv_4586 hypothetical protein; transglutaminase domain-containing protein 2272846..2273538 Pseudonocardia dioxanivorans CB1190 10363965 YP_004332208.1 CDS Psed_2131 NC_015312.1 2273549 2274628 D KEGG: svi:Svir_08650 Zn-dependent hydrolase, glyoxylase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 2273549..2274628 Pseudonocardia dioxanivorans CB1190 10363966 YP_004332209.1 CDS Psed_2132 NC_015312.1 2274808 2275296 D KEGG: svi:Svir_10250 hypothetical protein; hypothetical protein 2274808..2275296 Pseudonocardia dioxanivorans CB1190 10363967 YP_004332210.1 CDS Psed_2133 NC_015312.1 2275417 2275971 D KEGG: sen:SACE_1522 hypothetical protein; hypothetical protein 2275417..2275971 Pseudonocardia dioxanivorans CB1190 10363968 YP_004332211.1 CDS Psed_2134 NC_015312.1 2276043 2277287 R PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: ami:Amir_1324 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; 3-ketoacyl-ACP synthase I complement(2276043..2277287) Pseudonocardia dioxanivorans CB1190 10363969 YP_004332212.1 CDS Psed_2135 NC_015312.1 2277284 2277526 R TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: amd:AMED_2100 acyl carrier protein; PFAM: Phosphopantetheine-binding; acyl carrier protein complement(2277284..2277526) Pseudonocardia dioxanivorans CB1190 10363970 YP_004332213.1 CDS Psed_2136 NC_015312.1 2277580 2278569 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: svi:Svir_10280 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase complement(2277580..2278569) Pseudonocardia dioxanivorans CB1190 10363971 YP_004332214.1 CDS Psed_2137 NC_015312.1 2278566 2279453 R PFAM: Acyl transferase; KEGG: rha:RHA1_ro01199 [acyl-carrier protein] S-malonyltransferase; SMART: Polyketide synthase, acyl transferase domain; ACP S-malonyltransferase complement(2278566..2279453) Pseudonocardia dioxanivorans CB1190 10363972 YP_004332215.1 CDS Psed_2138 NC_015312.1 2279684 2281201 R KEGG: ami:Amir_1328 transcriptional regulator, PucR family; PucR family transcriptional regulator complement(2279684..2281201) Pseudonocardia dioxanivorans CB1190 10363973 YP_004332216.1 CDS Psed_2139 NC_015312.1 2281357 2282124 D PFAM: Pirin, N-terminal; KEGG: req:REQ_42380 pirin-like protein; pirin 2281357..2282124 Pseudonocardia dioxanivorans CB1190 10363974 YP_004332217.1 CDS Psed_2140 NC_015312.1 2282250 2282456 R KEGG: gob:Gobs_1896 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(2282250..2282456) Pseudonocardia dioxanivorans CB1190 10363975 YP_004332218.1 CDS Psed_2141 NC_015312.1 2282809 2285577 R KEGG: sen:SACE_1532 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; 2-oxo-acid dehydrogenase E1 complement(2282809..2285577) Pseudonocardia dioxanivorans CB1190 10363976 YP_004332219.1 CDS Psed_2142 NC_015312.1 2285783 2286217 D KEGG: ami:Amir_1335 hypothetical protein; hypothetical protein 2285783..2286217 Pseudonocardia dioxanivorans CB1190 10363977 YP_004332220.1 CDS Psed_2143 NC_015312.1 2286348 2286806 D PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: amd:AMED_2115 alkyl hydroperoxide reductase/thiol specific antioxidant; alkyl hydroperoxide reductase 2286348..2286806 Pseudonocardia dioxanivorans CB1190 10363978 YP_004332221.1 CDS Psed_2144 NC_015312.1 2287615 2288679 R PFAM: Aryldialkylphosphatase; KEGG: rer:RER_52720 phosphatase; aryldialkylphosphatase complement(2287615..2288679) Pseudonocardia dioxanivorans CB1190 10363980 YP_004332222.1 CDS Psed_2145 NC_015312.1 2289184 2289405 R hypothetical protein complement(2289184..2289405) Pseudonocardia dioxanivorans CB1190 10363981 YP_004332223.1 CDS Psed_2146 NC_015312.1 2290170 2291609 D KEGG: hch:HCH_06992 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinamide phosphoribosyltransferase 2290170..2291609 Pseudonocardia dioxanivorans CB1190 10363982 YP_004332224.1 CDS Psed_2147 NC_015312.1 2291903 2292721 D KEGG: sth:STH658 oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; 2,5-didehydrogluconate reductase 2291903..2292721 Pseudonocardia dioxanivorans CB1190 10363983 YP_004332225.1 CDS Psed_2148 NC_015312.1 2292804 2293535 D PFAM: Haloacid dehalogenase-like hydrolase; KEGG: sma:SAV_4277 hypothetical protein; haloacid dehalogenase 2292804..2293535 Pseudonocardia dioxanivorans CB1190 10363984 YP_004332226.1 CDS Psed_2150 NC_015312.1 2295073 2295411 D PFAM: NIPSNAP; KEGG: rpx:Rpdx1_2623 NIPSNAP family containing protein; NIPSNAP family containing protein 2295073..2295411 Pseudonocardia dioxanivorans CB1190 10363986 YP_004332227.1 CDS Psed_2151 NC_015312.1 2295408 2296409 D TIGRFAM: Quinone oxidoreductase , YhdH/YhfP; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: acr:Acry_2363 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; YhdH/YhfP family quinone oxidoreductase 2295408..2296409 Pseudonocardia dioxanivorans CB1190 10363987 YP_004332228.1 CDS Psed_2152 NC_015312.1 2296421 2296567 D hypothetical protein 2296421..2296567 Pseudonocardia dioxanivorans CB1190 10363988 YP_004332229.1 CDS Psed_2153 NC_015312.1 2297010 2297357 D PFAM: Domain of unknown function DUF861, cupin-3; KEGG: rop:ROP_54960 hypothetical protein; hypothetical protein 2297010..2297357 Pseudonocardia dioxanivorans CB1190 10363989 YP_004332230.1 CDS Psed_2154 NC_015312.1 2297829 2298725 D KEGG: ade:Adeh_1681 PE-PGRS family protein; PE-PGRS family protein 2297829..2298725 Pseudonocardia dioxanivorans CB1190 10363990 YP_004332231.1 CDS Psed_2155 NC_015312.1 2298671 2299450 R KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(2298671..2299450) Pseudonocardia dioxanivorans CB1190 10363991 YP_004332232.1 CDS Psed_2156 NC_015312.1 2299447 2300985 R PFAM: Integrase, catalytic core; KEGG: mav:MAV_3533 transposase; integrase catalytic subunit complement(2299447..2300985) Pseudonocardia dioxanivorans CB1190 10363992 YP_004332233.1 CDS Psed_2157 NC_015312.1 2301006 2301206 D hypothetical protein 2301006..2301206 Pseudonocardia dioxanivorans CB1190 10363993 YP_004332234.1 CDS Psed_2158 NC_015312.1 2302771 2304225 D KEGG: hch:HCH_06992 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinamide phosphoribosyltransferase 2302771..2304225 Pseudonocardia dioxanivorans CB1190 10363994 YP_004332235.1 CDS Psed_2159 NC_015312.1 2304306 2305373 D PFAM: Aryldialkylphosphatase; KEGG: rer:RER_52720 phosphatase; aryldialkylphosphatase 2304306..2305373 Pseudonocardia dioxanivorans CB1190 10363995 YP_004332236.1 CDS Psed_2160 NC_015312.1 2305413 2305754 D PFAM: Domain of unknown function DUF861, cupin-3; KEGG: mkm:Mkms_0992 protein of unknown function DUF861, cupin_3; hypothetical protein 2305413..2305754 Pseudonocardia dioxanivorans CB1190 10363996 YP_004332237.1 CDS Psed_2161 NC_015312.1 2305817 2307304 D PFAM: Aldehyde dehydrogenase domain; KEGG: fri:FraEuI1c_2858 aldehyde dehydrogenase; aldehyde dehydrogenase 2305817..2307304 Pseudonocardia dioxanivorans CB1190 10363997 YP_004332238.1 CDS Psed_2162 NC_015312.1 2307440 2308897 D KEGG: fal:FRAAL6082 succinate-semialdehyde dehydrogenase I, NADP-dependent; PFAM: Aldehyde dehydrogenase domain; lactaldehyde dehydrogenase 2307440..2308897 Pseudonocardia dioxanivorans CB1190 10363998 YP_004332239.1 CDS Psed_2163 NC_015312.1 2308993 2309775 D PFAM: Domain of unknown function DUF1355; KEGG: cdl:CDR20291_0307 hypothetical protein; hypothetical protein 2308993..2309775 Pseudonocardia dioxanivorans CB1190 10363999 YP_004332240.1 CDS Psed_2164 NC_015312.1 2309825 2310859 D KEGG: sth:STH770 LacI family transcriptional repressor; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 2309825..2310859 Pseudonocardia dioxanivorans CB1190 10364000 YP_004332241.1 CDS Psed_2165 NC_015312.1 2310856 2311785 D KEGG: ace:Acel_0624 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase; Ribokinase 2310856..2311785 Pseudonocardia dioxanivorans CB1190 10364001 YP_004332242.1 CDS Psed_2166 NC_015312.1 2311823 2312815 D TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: cwo:Cwoe_5250 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2311823..2312815 Pseudonocardia dioxanivorans CB1190 10364002 YP_004332243.1 CDS Psed_2167 NC_015312.1 2312909 2314021 D PFAM: Luciferase-like, subgroup; KEGG: sme:SMa0794 monoxygenase; luciferase-like protein 2312909..2314021 Pseudonocardia dioxanivorans CB1190 10364003 YP_004332244.1 CDS Psed_2168 NC_015312.1 2314127 2315389 D PFAM: Amidohydrolase 1; KEGG: aba:Acid345_1826 Pro-Hyp dipeptidase; amidohydrolase 2314127..2315389 Pseudonocardia dioxanivorans CB1190 10364004 YP_004332245.1 CDS Psed_2169 NC_015312.1 2315436 2316260 D PFAM: Alpha/beta hydrolase fold-1; KEGG: scb:SCAB_77421 hydrolase; alpha/beta hydrolase 2315436..2316260 Pseudonocardia dioxanivorans CB1190 10364005 YP_004332246.1 CDS Psed_2170 NC_015312.1 2316318 2316830 D KEGG: rha:RHA1_ro11047 oxidoreductase; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 2316318..2316830 Pseudonocardia dioxanivorans CB1190 10364006 YP_004332247.1 CDS Psed_2171 NC_015312.1 2317045 2317632 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO7518 TetR family transcriptional regulator; TetR family transcriptional regulator 2317045..2317632 Pseudonocardia dioxanivorans CB1190 10364007 YP_004332248.1 CDS Psed_2172 NC_015312.1 2317935 2318561 R PFAM: Haloacid dehalogenase-like hydrolase; KEGG: sma:SAV_4277 hypothetical protein; haloacid dehalogenase complement(2317935..2318561) Pseudonocardia dioxanivorans CB1190 10364008 YP_004332249.1 CDS Psed_2173 NC_015312.1 2318801 2319127 R PFAM: NIPSNAP; KEGG: bja:bll4801 hypothetical protein; NIPSNAP family containing protein complement(2318801..2319127) Pseudonocardia dioxanivorans CB1190 10364009 YP_004332250.1 CDS Psed_2174 NC_015312.1 2319124 2320227 R PFAM: Luciferase-like, subgroup; KEGG: sme:SMa0794 monoxygenase; luciferase-like protein complement(2319124..2320227) Pseudonocardia dioxanivorans CB1190 10364010 YP_004332251.1 CDS Psed_2175 NC_015312.1 2320368 2321360 R KEGG: ava:Ava_C0148 flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; NADPH dehydrogenase complement(2320368..2321360) Pseudonocardia dioxanivorans CB1190 10364011 YP_004332252.1 CDS Psed_2177 NC_015312.1 2322352 2323134 D PFAM: Domain of unknown function DUF1355; KEGG: cdl:CDR20291_0307 hypothetical protein; hypothetical protein 2322352..2323134 Pseudonocardia dioxanivorans CB1190 10364013 YP_004332253.1 CDS Psed_2179 NC_015312.1 2323862 2324446 R KEGG: afw:Anae109_2601 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein complement(2323862..2324446) Pseudonocardia dioxanivorans CB1190 10364015 YP_004332254.1 CDS Psed_2182 NC_015312.1 2325348 2326808 R KEGG: hch:HCH_06992 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinamide phosphoribosyltransferase complement(2325348..2326808) Pseudonocardia dioxanivorans CB1190 10364018 YP_004332255.1 CDS Psed_2185 NC_015312.1 2328938 2329879 D PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: amd:AMED_1631 purine nucleosidase; inosine/uridine-preferring nucleoside hydrolase 2328938..2329879 Pseudonocardia dioxanivorans CB1190 10364021 YP_004332256.1 CDS Psed_2187 NC_015312.1 2332736 2333686 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3740 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2332736..2333686 Pseudonocardia dioxanivorans CB1190 10364023 YP_004332257.1 CDS Psed_2188 NC_015312.1 2333683 2334603 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3739 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2333683..2334603 Pseudonocardia dioxanivorans CB1190 10364024 YP_004332258.1 CDS Psed_2189 NC_015312.1 2334600 2336294 D KEGG: kra:Krad_0942 ABC transporter related; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core; ABC transporter 2334600..2336294 Pseudonocardia dioxanivorans CB1190 10364025 YP_004332259.1 CDS Psed_2190 NC_015312.1 2336291 2337922 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mes:Meso_3737 extracellular solute-binding protein; ABC transporter substrate-binding protein 2336291..2337922 Pseudonocardia dioxanivorans CB1190 10364026 YP_004332260.1 CDS Psed_2191 NC_015312.1 2337967 2340084 D KEGG: mav:MAV_3809 dibenzothiophene desulfurization enzyme A; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Alpha/beta hydrolase fold-1; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 2337967..2340084 Pseudonocardia dioxanivorans CB1190 10364027 YP_004332261.1 CDS Psed_2192 NC_015312.1 2340171 2340794 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: fal:FRAAL4004 nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase complement(2340171..2340794) Pseudonocardia dioxanivorans CB1190 10364028 YP_004332262.1 CDS Psed_2193 NC_015312.1 2340875 2342101 D KEGG: fal:FRAAL2482 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup; alkanesulfonate monooxygenase 2340875..2342101 Pseudonocardia dioxanivorans CB1190 10364029 YP_004332263.1 CDS Psed_2194 NC_015312.1 2342098 2343306 D PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: fre:Franean1_3756 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase 2342098..2343306 Pseudonocardia dioxanivorans CB1190 10364030 YP_004332264.1 CDS Psed_2195 NC_015312.1 2343303 2344382 D PFAM: Luciferase-like, subgroup; KEGG: ara:Arad_8012 oxidoreductase; luciferase-like protein 2343303..2344382 Pseudonocardia dioxanivorans CB1190 10364031 YP_004332265.1 CDS Psed_2196 NC_015312.1 2344393 2346651 R KEGG: bbr:BB1545 biotin sulfoxide reductase; PFAM: Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase; trimethylamine-N-oxide reductase (cytochrome c) complement(2344393..2346651) Pseudonocardia dioxanivorans CB1190 10364032 YP_004332266.1 CDS Psed_2197 NC_015312.1 2346844 2347707 R PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fri:FraEuI1c_2012 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2346844..2347707) Pseudonocardia dioxanivorans CB1190 10364033 YP_004332267.1 CDS Psed_2198 NC_015312.1 2348125 2348889 D KEGG: fre:Franean1_2021 hypothetical protein; hypothetical protein 2348125..2348889 Pseudonocardia dioxanivorans CB1190 10364034 YP_004332268.1 CDS Psed_2199 NC_015312.1 2348886 2350745 D KEGG: fal:FRAAL3862 thiosulfate sulfurtransferase (partial match); PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; Rhodanese-like; SMART: Rhodanese-like; ketopantoate reductase ApbA/PanE domain-containing protein 2348886..2350745 Pseudonocardia dioxanivorans CB1190 10364035 YP_004332269.1 CDS Psed_2200 NC_015312.1 2350747 2351835 D KEGG: fal:FRAAL3868 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 2350747..2351835 Pseudonocardia dioxanivorans CB1190 10364036 YP_004332270.1 CDS Psed_2201 NC_015312.1 2351832 2353166 D KEGG: fal:FRAAL3861 glycolate oxidoreductase (partial match); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 2351832..2353166 Pseudonocardia dioxanivorans CB1190 10364037 YP_004332271.1 CDS Psed_2202 NC_015312.1 2353169 2353501 D PFAM: Class II aldolase/adducin, N-terminal; KEGG: stp:Strop_2788 hypothetical protein; class II aldolase/adducin family protein 2353169..2353501 Pseudonocardia dioxanivorans CB1190 10364038 YP_004332272.1 CDS Psed_2203 NC_015312.1 2353856 2355208 R KEGG: sen:SACE_0755 cobalamin synthesis CobW-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; cobalamin synthesis cobW domain-containing protein complement(2353856..2355208) Pseudonocardia dioxanivorans CB1190 10364039 YP_004332273.1 CDS Psed_2204 NC_015312.1 2355295 2355456 D TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: mab:MAB_0333c 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 2355295..2355456 Pseudonocardia dioxanivorans CB1190 10364040 YP_004332274.1 CDS Psed_2205 NC_015312.1 2355614 2356498 R KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein complement(2355614..2356498) Pseudonocardia dioxanivorans CB1190 10364041 YP_004332275.1 CDS Psed_2206 NC_015312.1 2356699 2357136 D hypothetical protein 2356699..2357136 Pseudonocardia dioxanivorans CB1190 10364042 YP_004332276.1 CDS Psed_2207 NC_015312.1 2357563 2358303 D PFAM: Protein of unknown function DUF1345; KEGG: rer:RER_34620 hypothetical protein; hypothetical protein 2357563..2358303 Pseudonocardia dioxanivorans CB1190 10364043 YP_004332277.1 CDS Psed_2208 NC_015312.1 2358853 2359293 D KEGG: scb:SCAB_84581 hypothetical protein; hypothetical protein 2358853..2359293 Pseudonocardia dioxanivorans CB1190 10364044 YP_004332278.1 CDS Psed_2209 NC_015312.1 2359295 2361178 D TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: sma:SAV_7237 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 2359295..2361178 Pseudonocardia dioxanivorans CB1190 10364045 YP_004332279.1 CDS Psed_2210 NC_015312.1 2361188 2361781 D KEGG: sma:SAV_7238 GrpE homologue; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE 2361188..2361781 Pseudonocardia dioxanivorans CB1190 10364046 YP_004332280.1 CDS Psed_2211 NC_015312.1 2361785 2362771 D KEGG: sma:SAV_7239 heat shock protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 2361785..2362771 Pseudonocardia dioxanivorans CB1190 10364047 YP_004332281.1 CDS Psed_2212 NC_015312.1 2362768 2363160 D KEGG: sro:Sros_4025 hypothetical protein; hypothetical protein 2362768..2363160 Pseudonocardia dioxanivorans CB1190 10364048 YP_004332282.1 CDS Psed_2213 NC_015312.1 2363151 2365775 D TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sma:SAV_7241 ATP-dependent Clp protease; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 2363151..2365775 Pseudonocardia dioxanivorans CB1190 10364049 YP_004332283.1 CDS Psed_2214 NC_015312.1 2365772 2366236 D KEGG: rha:RHA1_ro06703 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 2365772..2366236 Pseudonocardia dioxanivorans CB1190 10364050 YP_004332284.1 CDS Psed_2215 NC_015312.1 2366233 2366505 D KEGG: fri:FraEuI1c_6454 hypothetical protein; hypothetical protein 2366233..2366505 Pseudonocardia dioxanivorans CB1190 10364051 YP_004332285.1 CDS Psed_2216 NC_015312.1 2366502 2368220 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Cyclic nucleotide-binding domain; KEGG: sma:SAV_7243 thioredoxin reductase; SMART: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 2366502..2368220 Pseudonocardia dioxanivorans CB1190 10364052 YP_004332286.1 CDS Psed_2217 NC_015312.1 2368544 2369563 R KEGG: scb:SCAB_8981 LuxR family regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(2368544..2369563) Pseudonocardia dioxanivorans CB1190 10364053 YP_004332287.1 CDS Psed_2220 NC_015312.1 2370877 2373300 D TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: nfa:pnf1280 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 2370877..2373300 Pseudonocardia dioxanivorans CB1190 10364056 YP_004332288.1 CDS Psed_2221 NC_015312.1 2373380 2373778 R hypothetical protein complement(2373380..2373778) Pseudonocardia dioxanivorans CB1190 10364057 YP_004332289.1 CDS Psed_2222 NC_015312.1 2374030 2375286 D PFAM: Major facilitator superfamily MFS-1; KEGG: bcv:Bcav_0861 major facilitator superfamily MFS_1; major facilitator superfamily protein 2374030..2375286 Pseudonocardia dioxanivorans CB1190 10364058 YP_004332290.1 CDS Psed_2223 NC_015312.1 2375525 2376385 D KEGG: svi:Svir_05780 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein; MIP family channel protein 2375525..2376385 Pseudonocardia dioxanivorans CB1190 10364059 YP_004332291.1 CDS Psed_2224 NC_015312.1 2376391 2377473 R KEGG: rha:RHA1_ro02996 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase complement(2376391..2377473) Pseudonocardia dioxanivorans CB1190 10364060 YP_004332292.1 CDS Psed_2225 NC_015312.1 2377470 2378420 R KEGG: rha:RHA1_ro08511 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase complement(2377470..2378420) Pseudonocardia dioxanivorans CB1190 10364061 YP_004332293.1 CDS Psed_2226 NC_015312.1 2378522 2380795 R KEGG: nml:Namu_2880 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(2378522..2380795) Pseudonocardia dioxanivorans CB1190 10364062 YP_004332294.1 CDS Psed_2227 NC_015312.1 2380938 2382461 D PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: reu:Reut_A1585 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 2380938..2382461 Pseudonocardia dioxanivorans CB1190 10364063 YP_004332295.1 CDS Psed_2228 NC_015312.1 2382464 2384455 R KEGG: msm:MSMEG_4430 transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(2382464..2384455) Pseudonocardia dioxanivorans CB1190 10364064 YP_004332296.1 CDS Psed_2229 NC_015312.1 2384459 2384941 R KEGG: cwo:Cwoe_0945 flavin reductase domain protein FMN-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein complement(2384459..2384941) Pseudonocardia dioxanivorans CB1190 10364065 YP_004332297.1 CDS Psed_2230 NC_015312.1 2385130 2385519 D PFAM: YCII-related; KEGG: mmi:MMAR_4112 hypothetical protein; hypothetical protein 2385130..2385519 Pseudonocardia dioxanivorans CB1190 10364066 YP_004332298.1 CDS Psed_2231 NC_015312.1 2385563 2386096 D PFAM: Uncharacterised protein family YphA; KEGG: sgr:SGR_824 hypothetical protein; DoxX family protein 2385563..2386096 Pseudonocardia dioxanivorans CB1190 10364067 YP_004332299.1 CDS Psed_2232 NC_015312.1 2386181 2387029 R KEGG: fal:FRAAL2457 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(2386181..2387029) Pseudonocardia dioxanivorans CB1190 10364068 YP_004332300.1 CDS Psed_2233 NC_015312.1 2387061 2388704 R KEGG: pol:Bpro_5565 flavin-containing monooxygenase FMO; cyclohexanone monooxygenase complement(2387061..2388704) Pseudonocardia dioxanivorans CB1190 10364069 YP_004332301.1 CDS Psed_2234 NC_015312.1 2388832 2389974 D KEGG: rpa:RPA3462 thiolase; thiolase 2388832..2389974 Pseudonocardia dioxanivorans CB1190 10364070 YP_004332302.1 CDS Psed_2235 NC_015312.1 2389971 2390291 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: bja:blr3928 hypothetical protein; hypothetical protein 2389971..2390291 Pseudonocardia dioxanivorans CB1190 10364071 YP_004332303.1 CDS Psed_2236 NC_015312.1 2390288 2392402 D KEGG: rpd:RPD_3312 CoA-binding; PFAM: CoA-binding; SMART: CoA-binding; CoA-binding domain-containing protein 2390288..2392402 Pseudonocardia dioxanivorans CB1190 10364072 YP_004332304.1 CDS Psed_2237 NC_015312.1 2392422 2393423 D KEGG: rha:RHA1_ro06956 hypothetical protein; hypothetical protein 2392422..2393423 Pseudonocardia dioxanivorans CB1190 10364073 YP_004332305.1 CDS Psed_2238 NC_015312.1 2393570 2394397 R KEGG: svi:Svir_24560 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(2393570..2394397) Pseudonocardia dioxanivorans CB1190 10364074 YP_004332306.1 CDS Psed_2239 NC_015312.1 2394423 2395256 R KEGG: nml:Namu_2352 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(2394423..2395256) Pseudonocardia dioxanivorans CB1190 10364075 YP_004332307.1 CDS Psed_2240 NC_015312.1 2395264 2395659 R PFAM: Protein of unknown function DUF1486; KEGG: mjl:Mjls_3367 hypothetical protein; hypothetical protein complement(2395264..2395659) Pseudonocardia dioxanivorans CB1190 10364076 YP_004332308.1 CDS Psed_2241 NC_015312.1 2395781 2395951 R hypothetical protein complement(2395781..2395951) Pseudonocardia dioxanivorans CB1190 10364077 YP_004332309.1 CDS Psed_2242 NC_015312.1 2396409 2397197 D KEGG: bts:Btus_1282 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 2396409..2397197 Pseudonocardia dioxanivorans CB1190 10364078 YP_004332310.1 CDS Psed_2243 NC_015312.1 2397279 2397872 R PFAM: Carboxymuconolactone decarboxylase; KEGG: mpt:Mpe_A2657 hypothetical protein; carboxymuconolactone decarboxylase complement(2397279..2397872) Pseudonocardia dioxanivorans CB1190 10364079 YP_004332311.1 CDS Psed_2244 NC_015312.1 2398394 2399581 D PFAM: Peptidase M24, structural domain; Creatinase; KEGG: sme:SMa1329 peptidase; peptidase M24 2398394..2399581 Pseudonocardia dioxanivorans CB1190 10364080 YP_004332312.1 CDS Psed_2245 NC_015312.1 2399782 2401539 D PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: rop:ROP_46620 Fis family transcriptional regulator; Fis family transcriptional regulator 2399782..2401539 Pseudonocardia dioxanivorans CB1190 10364081 YP_004332313.1 CDS Psed_2246 NC_015312.1 2401619 2402320 D KEGG: art:Arth_3959 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2401619..2402320 Pseudonocardia dioxanivorans CB1190 10364082 YP_004332314.1 CDS Psed_2247 NC_015312.1 2402410 2403276 R KEGG: fre:Franean1_4489 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(2402410..2403276) Pseudonocardia dioxanivorans CB1190 10364083 YP_004332315.1 CDS Psed_2248 NC_015312.1 2403278 2403643 R KEGG: tcu:Tcur_4169 hypothetical protein; hypothetical protein complement(2403278..2403643) Pseudonocardia dioxanivorans CB1190 10364084 YP_004332316.1 CDS Psed_2249 NC_015312.1 2403758 2404699 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sen:SACE_7338 zinc-binding oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(2403758..2404699) Pseudonocardia dioxanivorans CB1190 10364085 YP_004332317.1 CDS Psed_2250 NC_015312.1 2404866 2405777 D manually curated; KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 2404866..2405777 Pseudonocardia dioxanivorans CB1190 10364086 YP_004332318.1 CDS Psed_2251 NC_015312.1 2405774 2406316 D KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 2405774..2406316 Pseudonocardia dioxanivorans CB1190 10364087 YP_004332319.1 CDS Psed_2252 NC_015312.1 2406316 2408784 D KEGG: sti:Sthe_2310 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 2406316..2408784 Pseudonocardia dioxanivorans CB1190 10364088 YP_004332320.1 CDS Psed_2253 NC_015312.1 2408781 2409545 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_0332 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2408781..2409545 Pseudonocardia dioxanivorans CB1190 10364089 YP_004332321.1 CDS Psed_2254 NC_015312.1 2409542 2410720 D KEGG: nml:Namu_3427 epoxide hydrolase domain-containing protein; PFAM: Epoxide hydrolase, N-terminal; Alpha/beta hydrolase fold-1; microsomal epoxide hydrolase 2409542..2410720 Pseudonocardia dioxanivorans CB1190 10364090 YP_004332322.1 CDS Psed_2255 NC_015312.1 2410717 2411631 D PFAM: ATPase, AAA-5; KEGG: nml:Namu_2354 ATPase; ATPase 2410717..2411631 Pseudonocardia dioxanivorans CB1190 10364091 YP_004332323.1 CDS Psed_2256 NC_015312.1 2411658 2412620 D KEGG: nml:Namu_2355 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 2411658..2412620 Pseudonocardia dioxanivorans CB1190 10364092 YP_004332324.1 CDS Psed_2257 NC_015312.1 2412737 2413579 D KEGG: rop:ROP_46670 carveol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2412737..2413579 Pseudonocardia dioxanivorans CB1190 10364093 YP_004332325.1 CDS Psed_2258 NC_015312.1 2413728 2414855 D KEGG: rop:ROP_31020 hypothetical protein; hypothetical protein 2413728..2414855 Pseudonocardia dioxanivorans CB1190 10364094 YP_004332326.1 CDS Psed_2259 NC_015312.1 2414848 2417331 D PFAM: ABC transporter-like; ABC transporter permease; KEGG: cwo:Cwoe_3938 ABC transporter related protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 2414848..2417331 Pseudonocardia dioxanivorans CB1190 10364095 YP_004332327.1 CDS Psed_2260 NC_015312.1 2417348 2418358 D PFAM: ABC transporter permease; KEGG: rop:ROP_31040 ABC transporter permease; ABC transporter permease 2417348..2418358 Pseudonocardia dioxanivorans CB1190 10364096 YP_004332328.1 CDS Psed_2261 NC_015312.1 2418355 2419146 D PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro08833 epoxide hydrolase; alpha/beta hydrolase 2418355..2419146 Pseudonocardia dioxanivorans CB1190 10364097 YP_004332329.1 CDS Psed_2262 NC_015312.1 2419136 2419900 D PFAM: Aldehyde-lyase domain; KEGG: rop:ROP_33640 oxidoreductase/aldolase; HpcH/HpaI aldolase 2419136..2419900 Pseudonocardia dioxanivorans CB1190 10364098 YP_004332330.1 CDS Psed_2263 NC_015312.1 2420015 2421166 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: rxy:Rxyl_2379 zinc-binding alcohol dehydrogenase; alcohol dehydrogenase 2420015..2421166 Pseudonocardia dioxanivorans CB1190 10364099 YP_004332331.1 CDS Psed_2264 NC_015312.1 2421337 2422197 D PFAM: Xylose isomerase, TIM barrel domain; KEGG: swi:Swit_3304 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 2421337..2422197 Pseudonocardia dioxanivorans CB1190 10364100 YP_004332332.1 CDS Psed_2265 NC_015312.1 2422335 2423453 D KEGG: rop:ROP_31020 hypothetical protein; hypothetical protein 2422335..2423453 Pseudonocardia dioxanivorans CB1190 10364101 YP_004332333.1 CDS Psed_2266 NC_015312.1 2423634 2424485 R KEGG: rha:RHA1_ro08833 epoxide hydrolase; manually curated; PFAM: Alpha/beta hydrolase fold-1; alpha/beta hydrolase complement(2423634..2424485) Pseudonocardia dioxanivorans CB1190 10364102 YP_004332334.1 CDS Psed_2267 NC_015312.1 2424675 2425082 D KEGG: fra:Francci3_2500 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 2424675..2425082 Pseudonocardia dioxanivorans CB1190 10364103 YP_004332335.1 CDS Psed_2268 NC_015312.1 2425079 2426887 D PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; KEGG: amd:AMED_5732 transport integral membrane protein; Cl- channel voltage-gated family protein 2425079..2426887 Pseudonocardia dioxanivorans CB1190 10364104 YP_004332336.1 CDS Psed_2269 NC_015312.1 2426835 2427875 R KEGG: fre:Franean1_1870 helix-turn-helix type 11 domain-containing protein; helix-turn-helix type 11 domain-containing protein complement(2426835..2427875) Pseudonocardia dioxanivorans CB1190 10364105 YP_004332337.1 CDS Psed_2270 NC_015312.1 2427981 2428397 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mav:MAV_1244 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 2427981..2428397 Pseudonocardia dioxanivorans CB1190 10364106 YP_004332338.1 CDS Psed_2271 NC_015312.1 2428402 2429763 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: fri:FraEuI1c_3931 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(2428402..2429763) Pseudonocardia dioxanivorans CB1190 10364107 YP_004332339.1 CDS Psed_2272 NC_015312.1 2429982 2431085 R KEGG: azc:AZC_1411 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase complement(2429982..2431085) Pseudonocardia dioxanivorans CB1190 10364108 YP_004332340.1 CDS Psed_2273 NC_015312.1 2431160 2431285 R PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(2431160..2431285) Pseudonocardia dioxanivorans CB1190 10364109 YP_004332341.1 CDS Psed_2274 NC_015312.1 2431285 2432079 R KEGG: ava:Ava_4328 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(2431285..2432079) Pseudonocardia dioxanivorans CB1190 10364110 YP_004332342.1 CDS Psed_2275 NC_015312.1 2432243 2432974 D KEGG: cwo:Cwoe_3227 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; FAD synthetase 2432243..2432974 Pseudonocardia dioxanivorans CB1190 10364111 YP_004332343.1 CDS Psed_2276 NC_015312.1 2433073 2436111 D PFAM: Signal transduction response regulator, C-terminal; Bacterial transcriptional activator domain; KEGG: ach:Achl_4571 transcriptional activator domain protein; transcriptional regulator domain-containing protein 2433073..2436111 Pseudonocardia dioxanivorans CB1190 10364112 YP_004332344.1 CDS Psed_2277 NC_015312.1 2436194 2436745 D KEGG: ach:Achl_4570 flavin reductase domain protein FMN-binding; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 2436194..2436745 Pseudonocardia dioxanivorans CB1190 10364113 YP_004332345.1 CDS Psed_2278 NC_015312.1 2436768 2438108 D KEGG: bch:Bcen2424_5833 ATP-dependent transcription regulator LuxR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2436768..2438108 Pseudonocardia dioxanivorans CB1190 10364114 YP_004332346.1 CDS Psed_2279 NC_015312.1 2438069 2439730 R PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: reu:Reut_A1585 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase complement(2438069..2439730) Pseudonocardia dioxanivorans CB1190 10364115 YP_004332347.1 CDS Psed_2280 NC_015312.1 2439754 2440578 D KEGG: rpa:RPA2149 hydroxyquinol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase 2439754..2440578 Pseudonocardia dioxanivorans CB1190 10364116 YP_004332348.1 CDS Psed_2281 NC_015312.1 2440672 2441430 R KEGG: rop:ROP_11540 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(2440672..2441430) Pseudonocardia dioxanivorans CB1190 10364117 YP_004332349.1 CDS Psed_2282 NC_015312.1 2441593 2442873 D PFAM: O-acyltransferase, WSD1, N-terminal; KEGG: nml:Namu_4293 hypothetical protein; hypothetical protein 2441593..2442873 Pseudonocardia dioxanivorans CB1190 10364118 YP_004332350.1 CDS Psed_2283 NC_015312.1 2442910 2443692 R PFAM: UspA; KEGG: sen:SACE_2444 universal stress protein; UspA domain-containing protein complement(2442910..2443692) Pseudonocardia dioxanivorans CB1190 10364119 YP_004332351.1 CDS Psed_2284 NC_015312.1 2444025 2444492 D KEGG: amd:AMED_5479 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein 2444025..2444492 Pseudonocardia dioxanivorans CB1190 10364120 YP_004332352.1 CDS Psed_2286 NC_015312.1 2445237 2446787 D KEGG: gob:Gobs_3546 transmembrane protein; hypothetical protein 2445237..2446787 Pseudonocardia dioxanivorans CB1190 10364122 YP_004332353.1 CDS Psed_2287 NC_015312.1 2446784 2447038 D PFAM: Protein of unknown function DUF2078, membrane; KEGG: mgi:Mflv_5393 hypothetical protein; hypothetical protein 2446784..2447038 Pseudonocardia dioxanivorans CB1190 10364123 YP_004332354.1 CDS Psed_2288 NC_015312.1 2447159 2447359 R hypothetical protein complement(2447159..2447359) Pseudonocardia dioxanivorans CB1190 10364124 YP_004332355.1 CDS Psed_2289 NC_015312.1 2447604 2447864 D hypothetical protein 2447604..2447864 Pseudonocardia dioxanivorans CB1190 10364125 YP_004332356.1 CDS Psed_2290 NC_015312.1 2448016 2448831 D KEGG: ami:Amir_2412 hypothetical protein; hypothetical protein 2448016..2448831 Pseudonocardia dioxanivorans CB1190 10364126 YP_004332357.1 CDS Psed_2291 NC_015312.1 2448988 2449410 D KEGG: tcu:Tcur_0499 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 2448988..2449410 Pseudonocardia dioxanivorans CB1190 10364127 YP_004332358.1 CDS Psed_2292 NC_015312.1 2449506 2450150 R KEGG: ami:Amir_6098 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(2449506..2450150) Pseudonocardia dioxanivorans CB1190 10364128 YP_004332359.1 CDS Psed_2293 NC_015312.1 2450380 2450772 D KEGG: cai:Caci_2703 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 2450380..2450772 Pseudonocardia dioxanivorans CB1190 10364129 YP_004332360.1 CDS Psed_2294 NC_015312.1 2450914 2451447 D KEGG: sti:Sthe_0758 hypothetical protein; hypothetical protein 2450914..2451447 Pseudonocardia dioxanivorans CB1190 10364130 YP_004332361.1 CDS Psed_2295 NC_015312.1 2451512 2451697 R PFAM: Domain of unknown function DUF1918; KEGG: sen:SACE_2460 hypothetical protein; hypothetical protein complement(2451512..2451697) Pseudonocardia dioxanivorans CB1190 10364131 YP_004332362.1 CDS Psed_2296 NC_015312.1 2451929 2452396 D KEGG: nml:Namu_1797 hypothetical protein; hypothetical protein 2451929..2452396 Pseudonocardia dioxanivorans CB1190 10364132 YP_004332363.1 CDS Psed_2297 NC_015312.1 2452393 2453052 D KEGG: nml:Namu_2007 hypothetical protein; hypothetical protein 2452393..2453052 Pseudonocardia dioxanivorans CB1190 10364133 YP_004332364.1 CDS Psed_2298 NC_015312.1 2453334 2454227 D PFAM: UspA; KEGG: amd:AMED_5478 universal stress protein; UspA domain-containing protein 2453334..2454227 Pseudonocardia dioxanivorans CB1190 10364134 YP_004332365.1 CDS Psed_2299 NC_015312.1 2454365 2454766 D KEGG: sro:Sros_4105 hypothetical protein; hypothetical protein 2454365..2454766 Pseudonocardia dioxanivorans CB1190 10364135 YP_004332366.1 CDS Psed_2300 NC_015312.1 2454796 2455554 R KEGG: kfl:Kfla_0222 hypothetical protein; hypothetical protein complement(2454796..2455554) Pseudonocardia dioxanivorans CB1190 10364136 YP_004332367.1 CDS Psed_2301 NC_015312.1 2455842 2456504 D PFAM: Uncharacterised protein family UPF0126; KEGG: mgi:Mflv_0991 hypothetical protein; hypothetical protein 2455842..2456504 Pseudonocardia dioxanivorans CB1190 10364137 YP_004332368.1 CDS Psed_2302 NC_015312.1 2456549 2457064 R hypothetical protein complement(2456549..2457064) Pseudonocardia dioxanivorans CB1190 10364138 YP_004332369.1 CDS Psed_2303 NC_015312.1 2457278 2458615 R PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; KEGG: svi:Svir_32600 glutamate dehydrogenase; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; glutamate dehydrogenase complement(2457278..2458615) Pseudonocardia dioxanivorans CB1190 10364139 YP_004332370.1 CDS Psed_2304 NC_015312.1 2458766 2459263 R KEGG: bid:Bind_1827 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(2458766..2459263) Pseudonocardia dioxanivorans CB1190 10364140 YP_004332371.1 CDS Psed_2305 NC_015312.1 2459495 2460244 R hypothetical protein complement(2459495..2460244) Pseudonocardia dioxanivorans CB1190 10364141 YP_004332372.1 CDS Psed_2306 NC_015312.1 2460307 2460816 R PFAM: Transcription elongation factor, GreA/GreB, C-terminal; KEGG: svi:Svir_31810 transcription elongation factor GreA; GreA/GreB family elongation factor complement(2460307..2460816) Pseudonocardia dioxanivorans CB1190 10364142 YP_004332373.1 CDS Psed_2307 NC_015312.1 2461332 2461820 R KEGG: rha:RHA1_ro08274 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(2461332..2461820) Pseudonocardia dioxanivorans CB1190 10364143 YP_004332374.1 CDS Psed_2308 NC_015312.1 2461884 2463572 R KEGG: tcu:Tcur_1126 response regulator receiver modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; SMART: Signal transduction response regulator, receiver domain; Protein phosphatase 2C-like; response regulator receiver modulated serine phosphatase complement(2461884..2463572) Pseudonocardia dioxanivorans CB1190 10364144 YP_004332375.1 CDS Psed_2310 NC_015312.1 2464307 2464675 D PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: saq:Sare_2243 anti-sigma-factor antagonist; sulfate transporter/antisigma-factor antagonist STAS 2464307..2464675 Pseudonocardia dioxanivorans CB1190 10364146 YP_004332376.1 CDS Psed_2311 NC_015312.1 2464737 2465795 D KEGG: amd:AMED_4131 chemotaxis-specific methylesterase CheB; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; chemotaxis protein CheB 2464737..2465795 Pseudonocardia dioxanivorans CB1190 10364147 YP_004332377.1 CDS Psed_2312 NC_015312.1 2465852 2467690 D SMART: MCP methyltransferase, CheR-type; PAS; TIGRFAM: PAS; KEGG: amd:AMED_4133 chemotaxis protein methyltransferase CheR; PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; PAS fold-4; PAS fold; chemotaxis protein CheR 2465852..2467690 Pseudonocardia dioxanivorans CB1190 10364148 YP_004332378.1 CDS Psed_2313 NC_015312.1 2467727 2468116 D hypothetical protein 2467727..2468116 Pseudonocardia dioxanivorans CB1190 10364149 YP_004332379.1 CDS Psed_2314 NC_015312.1 2468227 2468952 D PFAM: ATPase-like, ATP-binding domain; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: ami:Amir_1818 signal transduction histidine kinase; ATP-binding protein 2468227..2468952 Pseudonocardia dioxanivorans CB1190 10364150 YP_004332380.1 CDS Psed_2316 NC_015312.1 2470833 2471345 R KEGG: amd:AMED_4134 hypothetical protein; hypothetical protein complement(2470833..2471345) Pseudonocardia dioxanivorans CB1190 10364152 YP_004332381.1 CDS Psed_2317 NC_015312.1 2471396 2471494 R hypothetical protein complement(2471396..2471494) Pseudonocardia dioxanivorans CB1190 10364153 YP_004332382.1 CDS Psed_2318 NC_015312.1 2471580 2472116 D KEGG: gob:Gobs_3601 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 2471580..2472116 Pseudonocardia dioxanivorans CB1190 10364154 YP_004332383.1 CDS Psed_2320 NC_015312.1 2473066 2473272 D hypothetical protein 2473066..2473272 Pseudonocardia dioxanivorans CB1190 10364156 YP_004332384.1 CDS Psed_2321 NC_015312.1 2473340 2474527 D KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein 2473340..2474527 Pseudonocardia dioxanivorans CB1190 10364157 YP_004332385.1 CDS Psed_2322 NC_015312.1 2474619 2475863 D KEGG: bxe:Bxe_A2358 hypothetical protein; PFAM: CoA-transferase III; formyl-CoA transferase 2474619..2475863 Pseudonocardia dioxanivorans CB1190 10364158 YP_004332386.1 CDS Psed_2323 NC_015312.1 2475913 2476554 R KEGG: rxy:Rxyl_0276 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(2475913..2476554) Pseudonocardia dioxanivorans CB1190 10364159 YP_004332387.1 CDS Psed_2324 NC_015312.1 2476694 2482273 R TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; Signal transduction response regulator, receiver domain; PAS fold-3; GAF; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: gob:Gobs_0116 multi-sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAC motif; Signal transduction response regulator, receiver domain; Protein phosphatase 2C-like; multi-sensor signal transduction histidine kinase complement(2476694..2482273) Pseudonocardia dioxanivorans CB1190 10364160 YP_004332388.1 CDS Psed_2325 NC_015312.1 2482633 2483439 R PFAM: ABC transporter-like; KEGG: mta:Moth_1861 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase complement(2482633..2483439) Pseudonocardia dioxanivorans CB1190 10364161 YP_004332389.1 CDS Psed_2326 NC_015312.1 2483426 2484376 R KEGG: mta:Moth_1862 cobalt ABC transporter CbiQ, permease subunit; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ complement(2483426..2484376) Pseudonocardia dioxanivorans CB1190 10364162 YP_004332390.1 CDS Psed_2327 NC_015312.1 2484373 2485482 R PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: mta:Moth_1863 cobalt transport protein CbiM; cobalamin (vitamin B12) biosynthesis protein CbiM complement(2484373..2485482) Pseudonocardia dioxanivorans CB1190 10364163 YP_004332391.1 CDS Psed_2328 NC_015312.1 2485836 2486957 D KEGG: amd:AMED_8813 high-affinity nickel-transport protein; TIGRFAM: Nickel/cobalt transporter, high-affinity, bacteria; PFAM: Nickel/cobalt transporter, high-affinity; high-affinity nickel-transporter 2485836..2486957 Pseudonocardia dioxanivorans CB1190 10364164 YP_004332392.1 CDS Psed_2329 NC_015312.1 2487119 2487757 D KEGG: sno:Snov_0060 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; peroxidase 2487119..2487757 Pseudonocardia dioxanivorans CB1190 10364165 YP_004332393.1 CDS Psed_2330 NC_015312.1 2487918 2488805 D PFAM: Drug/metabolite transporter; KEGG: msm:MSMEG_3416 protein of unknown function DUF6, transmembrane; hypothetical protein 2487918..2488805 Pseudonocardia dioxanivorans CB1190 10364166 YP_004332394.1 CDS Psed_2331 NC_015312.1 2488829 2489734 R KEGG: mil:ML5_4930 carbohydrate kinase, yjef related protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; PFAM: Uncharacterised protein family, carbohydrate kinase-related; hypothetical protein complement(2488829..2489734) Pseudonocardia dioxanivorans CB1190 10364167 YP_004332395.1 CDS Psed_2332 NC_015312.1 2489712 2490485 R KEGG: mau:Micau_3460 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase complement(2489712..2490485) Pseudonocardia dioxanivorans CB1190 10364168 YP_004332396.1 CDS Psed_2333 NC_015312.1 2490449 2491300 R KEGG: gbr:Gbro_0721 glycosyltransferase-like protein; glycosyltransferase-like protein complement(2490449..2491300) Pseudonocardia dioxanivorans CB1190 10364169 YP_004332397.1 CDS Psed_2334 NC_015312.1 2491285 2492361 R PFAM: Glycosyl transferase, family 28, C-terminal; KEGG: req:REQ_26890 hypothetical protein; glycosyl transferase protein complement(2491285..2492361) Pseudonocardia dioxanivorans CB1190 10364170 YP_004332398.1 CDS Psed_2335 NC_015312.1 2492358 2493434 R PFAM: Glycosyl transferase, group 1; KEGG: rha:RHA1_ro00092 glycosyltransferase; group 1 glycosyl transferase complement(2492358..2493434) Pseudonocardia dioxanivorans CB1190 10364171 YP_004332399.1 CDS Psed_2336 NC_015312.1 2493431 2494546 R KEGG: gbr:Gbro_0724 hypothetical protein; hypothetical protein complement(2493431..2494546) Pseudonocardia dioxanivorans CB1190 10364172 YP_004332400.1 CDS Psed_2337 NC_015312.1 2494664 2495716 R KEGG: gob:Gobs_3356 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease BN complement(2494664..2495716) Pseudonocardia dioxanivorans CB1190 10364173 YP_004332401.1 CDS Psed_2338 NC_015312.1 2496002 2496745 R PFAM: ANTAR; KEGG: sen:SACE_1903 response regulator receiver/ANTAR domain-containing protein; ANTAR domain-containing protein complement(2496002..2496745) Pseudonocardia dioxanivorans CB1190 10364174 YP_004332402.1 CDS Psed_2339 NC_015312.1 2496950 2497069 D hypothetical protein 2496950..2497069 Pseudonocardia dioxanivorans CB1190 10364175 YP_004332403.1 CDS Psed_2340 NC_015312.1 2497227 2497430 R hypothetical protein complement(2497227..2497430) Pseudonocardia dioxanivorans CB1190 10364176 YP_004332404.1 CDS Psed_2341 NC_015312.1 2497473 2498552 R PFAM: Mg2+ transporter protein, CorA-like; KEGG: amd:AMED_4525 CorA-like magnesium transport protein; Mg2 transporter protein CorA family protein complement(2497473..2498552) Pseudonocardia dioxanivorans CB1190 10364177 YP_004332405.1 CDS Psed_2342 NC_015312.1 2498898 2499353 R KEGG: gob:Gobs_4976 hypothetical protein; hypothetical protein complement(2498898..2499353) Pseudonocardia dioxanivorans CB1190 10364178 YP_004332406.1 CDS Psed_2343 NC_015312.1 2499533 2499724 D hypothetical protein 2499533..2499724 Pseudonocardia dioxanivorans CB1190 10364179 YP_004332407.1 CDS Psed_2344 NC_015312.1 2499851 2500429 D PFAM: Haemerythrin/HHE cation-binding motif; KEGG: cef:CE2760 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 2499851..2500429 Pseudonocardia dioxanivorans CB1190 10364180 YP_004332408.1 CDS Psed_2347 NC_015312.1 2501494 2502390 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: kra:Krad_2810 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(2501494..2502390) Pseudonocardia dioxanivorans CB1190 10364183 YP_004332409.1 CDS Psed_2348 NC_015312.1 2502688 2503845 D KEGG: kra:Krad_0034 hypothetical protein; hypothetical protein 2502688..2503845 Pseudonocardia dioxanivorans CB1190 10364184 YP_004332410.1 CDS Psed_2349 NC_015312.1 2503871 2504284 D PFAM: ATPase-like, ATP-binding domain; KEGG: ami:Amir_5361 anti-sigma regulatory factor, serine/threonine protein kinase; ATP-binding protein 2503871..2504284 Pseudonocardia dioxanivorans CB1190 10364185 YP_004332411.1 CDS Psed_2350 NC_015312.1 2504405 2505217 D KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; FliA/WhiG subfamily RNA polymerase sigma-28 subunit 2504405..2505217 Pseudonocardia dioxanivorans CB1190 10364186 YP_004332412.1 CDS Psed_2351 NC_015312.1 2505233 2505538 R KEGG: mil:ML5_5540 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(2505233..2505538) Pseudonocardia dioxanivorans CB1190 10364187 YP_004332413.1 CDS Psed_2352 NC_015312.1 2505615 2506394 D TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: fre:Franean1_1430 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; methionine aminopeptidase 2505615..2506394 Pseudonocardia dioxanivorans CB1190 10364188 YP_004332414.1 CDS Psed_2353 NC_015312.1 2506401 2506742 R KEGG: gym:GYMC10_4043 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator complement(2506401..2506742) Pseudonocardia dioxanivorans CB1190 10364189 YP_004332415.1 CDS Psed_2354 NC_015312.1 2506780 2508552 R KEGG: amd:AMED_7729 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I complement(2506780..2508552) Pseudonocardia dioxanivorans CB1190 10364190 YP_004332416.1 CDS Psed_2355 NC_015312.1 2508554 2508820 R hypothetical protein complement(2508554..2508820) Pseudonocardia dioxanivorans CB1190 10364191 YP_004332417.1 CDS Psed_2357 NC_015312.1 2509498 2510070 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_3042 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2509498..2510070) Pseudonocardia dioxanivorans CB1190 10364193 YP_004332418.1 CDS Psed_2358 NC_015312.1 2510273 2510725 D PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: amd:AMED_3041 carbon-monoxide dehydrogenase small subunit; (2Fe-2S)-binding protein 2510273..2510725 Pseudonocardia dioxanivorans CB1190 10364194 YP_004332419.1 CDS Psed_2359 NC_015312.1 2510712 2511686 D KEGG: amd:AMED_3040 carbon-monoxide dehydrogenase medium subunit; PFAM: Molybdopterin dehydrogenase, FAD-binding; xanthine dehydrogenase 2510712..2511686 Pseudonocardia dioxanivorans CB1190 10364195 YP_004332420.1 CDS Psed_2360 NC_015312.1 2511683 2513869 D KEGG: sen:SACE_4618 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase 2511683..2513869 Pseudonocardia dioxanivorans CB1190 10364196 YP_004332421.1 CDS Psed_2361 NC_015312.1 2513920 2514987 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: sro:Sros_5491 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2513920..2514987) Pseudonocardia dioxanivorans CB1190 10364197 YP_004332422.1 CDS Psed_2362 NC_015312.1 2515105 2516304 D KEGG: sgr:SGR_6670 dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; S-(hydroxymethyl)glutathione dehydrogenase 2515105..2516304 Pseudonocardia dioxanivorans CB1190 10364198 YP_004332423.1 CDS Psed_2363 NC_015312.1 2516553 2516969 D KEGG: amd:AMED_5201 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein 2516553..2516969 Pseudonocardia dioxanivorans CB1190 10364199 YP_004332424.1 CDS Psed_2365 NC_015312.1 2517746 2518627 R KEGG: kfl:Kfla_4219 catalase; PFAM: Catalase, manganese; catalase complement(2517746..2518627) Pseudonocardia dioxanivorans CB1190 10364201 YP_004332425.1 CDS Psed_2366 NC_015312.1 2518793 2519755 R PFAM: Protein of unknown function DUF2260; KEGG: nda:Ndas_3470 protein of unknown function DUF2260; hypothetical protein complement(2518793..2519755) Pseudonocardia dioxanivorans CB1190 10364202 YP_004332426.1 CDS Psed_2367 NC_015312.1 2519759 2520778 R KEGG: nda:Ndas_3469 hypothetical protein; hypothetical protein complement(2519759..2520778) Pseudonocardia dioxanivorans CB1190 10364203 YP_004332427.1 CDS Psed_2368 NC_015312.1 2520775 2520999 R PFAM: Iron sulphur-containing domain, CDGSH-type; KEGG: nda:Ndas_3468 iron sulfur domain-containing, CDGSH-type; Iron sulfur domain-containing protein complement(2520775..2520999) Pseudonocardia dioxanivorans CB1190 10364204 YP_004332428.1 CDS Psed_2369 NC_015312.1 2520992 2521639 R KEGG: kra:Krad_3360 methylase; TIGRFAM: methylase; PFAM: Methyltransferase small; methylase complement(2520992..2521639) Pseudonocardia dioxanivorans CB1190 10364205 YP_004332429.1 CDS Psed_2370 NC_015312.1 2522050 2522409 D hypothetical protein 2522050..2522409 Pseudonocardia dioxanivorans CB1190 10364206 YP_004332430.1 CDS Psed_2371 NC_015312.1 2523106 2524716 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fri:FraEuI1c_3106 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 2523106..2524716 Pseudonocardia dioxanivorans CB1190 10364207 YP_004332431.1 CDS Psed_2372 NC_015312.1 2524822 2525772 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3107 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2524822..2525772 Pseudonocardia dioxanivorans CB1190 10364208 YP_004332432.1 CDS Psed_2373 NC_015312.1 2525769 2526683 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3108 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2525769..2526683 Pseudonocardia dioxanivorans CB1190 10364209 YP_004332433.1 CDS Psed_2374 NC_015312.1 2526733 2527827 D PFAM: Luciferase-like, subgroup; KEGG: ske:Sked_34610 F420-dependent methylene-tetrahydromethanopterin reductase; luciferase-like protein 2526733..2527827 Pseudonocardia dioxanivorans CB1190 10364210 YP_004332434.1 CDS Psed_2375 NC_015312.1 2527895 2528077 R hypothetical protein complement(2527895..2528077) Pseudonocardia dioxanivorans CB1190 10364211 YP_004332435.1 CDS Psed_2376 NC_015312.1 2528166 2528738 R PFAM: ANTAR; KEGG: gob:Gobs_3633 ANTAR domain-containing protein; ANTAR domain-containing protein complement(2528166..2528738) Pseudonocardia dioxanivorans CB1190 10364212 YP_004332436.1 CDS Psed_2377 NC_015312.1 2528819 2529502 D manually curated; PFAM: GAF; ANTAR; KEGG: fre:Franean1_0255 GAF sensor protein; SMART: GAF; GAF domain-containing protein 2528819..2529502 Pseudonocardia dioxanivorans CB1190 10364213 YP_004332437.1 CDS Psed_2378 NC_015312.1 2529551 2530555 D KEGG: amd:AMED_5210 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase; TIGRFAM: Glucose-6-phosphate dehydrogenase-related, F420-dependent; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 2529551..2530555 Pseudonocardia dioxanivorans CB1190 10364214 YP_004332438.1 CDS Psed_2380 NC_015312.1 2531231 2532142 D KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; SigB/F/G subfamily RNA polymerase sigma-28 subunit 2531231..2532142 Pseudonocardia dioxanivorans CB1190 10364216 YP_004332439.1 CDS Psed_2381 NC_015312.1 2532229 2533833 D KEGG: svi:Svir_34940 fused histidine kinase with GAF domain/SpoIIE-like protein; PFAM: Sporulation stage II, protein E C-terminal; GAF; ATPase-like, ATP-binding domain; SMART: Protein phosphatase 2C-like; GAF; GAF sensor-containing protein serine/threonine phosphatase 2532229..2533833 Pseudonocardia dioxanivorans CB1190 10364217 YP_004332440.1 CDS Psed_2382 NC_015312.1 2533830 2534147 D PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: svi:Svir_34950 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); sulfate transporter/antisigma-factor antagonist STAS 2533830..2534147 Pseudonocardia dioxanivorans CB1190 10364218 YP_004332441.1 CDS Psed_2383 NC_015312.1 2534247 2534498 D hypothetical protein 2534247..2534498 Pseudonocardia dioxanivorans CB1190 10364219 YP_004332442.1 CDS Psed_2384 NC_015312.1 2534775 2535218 D KEGG: rha:RHA1_ro00704 hypothetical protein; hypothetical protein 2534775..2535218 Pseudonocardia dioxanivorans CB1190 10364220 YP_004332443.1 CDS Psed_2385 NC_015312.1 2535510 2536340 D KEGG: mjl:Mjls_2373 hypothetical protein; hypothetical protein 2535510..2536340 Pseudonocardia dioxanivorans CB1190 10364221 YP_004332444.1 CDS Psed_2386 NC_015312.1 2536333 2537631 D PFAM: Streptomyces cyclase/dehydrase; KEGG: rha:RHA1_ro03411 hypothetical protein; cyclase 2536333..2537631 Pseudonocardia dioxanivorans CB1190 10364222 YP_004332445.1 CDS Psed_2387 NC_015312.1 2537632 2538069 D KEGG: sen:SACE_0974 gas vesicle synthesis-like protein; HAMAP: Gas vesicle structural protein; PFAM: Gas vesicle protein GvpA; gas vesicle structural protein 2537632..2538069 Pseudonocardia dioxanivorans CB1190 10364223 YP_004332446.1 CDS Psed_2388 NC_015312.1 2538066 2538797 D PFAM: Gas vesicle protein GvpL/GvpF; KEGG: sen:SACE_0973 gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF 2538066..2538797 Pseudonocardia dioxanivorans CB1190 10364224 YP_004332447.1 CDS Psed_2389 NC_015312.1 2538804 2539034 D KEGG: req:REQ_25930 gas vesicle protein GvpG; gas vesicle protein GvpG 2538804..2539034 Pseudonocardia dioxanivorans CB1190 10364225 YP_004332448.1 CDS Psed_2390 NC_015312.1 2539067 2539903 D PFAM: Gas vesicle protein GvpO; KEGG: sen:SACE_0971 hypothetical protein; gas vesicle synthesis family protein 2539067..2539903 Pseudonocardia dioxanivorans CB1190 10364226 YP_004332449.1 CDS Psed_2391 NC_015312.1 2539921 2540307 D PFAM: Gas vesicle protein GvpA; KEGG: sro:Sros_6859 hypothetical protein; gas vesicle protein GvpA 2539921..2540307 Pseudonocardia dioxanivorans CB1190 10364227 YP_004332450.1 CDS Psed_2392 NC_015312.1 2540304 2541053 D PFAM: Gas vesicle protein GvpL/GvpF; KEGG: msm:MSMEG_5746 gas vesicle protein; gas vesicle synthesis GvpLGvpF 2540304..2541053 Pseudonocardia dioxanivorans CB1190 10364228 YP_004332451.1 CDS Psed_2393 NC_015312.1 2541050 2541250 D PFAM: Gas vesicle protein GvpA; KEGG: req:REQ_25970 gas vesicle protein; gas vesicle protein GvpA 2541050..2541250 Pseudonocardia dioxanivorans CB1190 10364229 YP_004332452.1 CDS Psed_2394 NC_015312.1 2541243 2541542 D PFAM: Gas vesicle protein GvpK; KEGG: msm:MSMEG_5744 gas vesicle protein K; gas vesicle protein K 2541243..2541542 Pseudonocardia dioxanivorans CB1190 10364230 YP_004332453.1 CDS Psed_2395 NC_015312.1 2541583 2541846 R hypothetical protein complement(2541583..2541846) Pseudonocardia dioxanivorans CB1190 10364231 YP_004332454.1 CDS Psed_2396 NC_015312.1 2541970 2542167 R hypothetical protein complement(2541970..2542167) Pseudonocardia dioxanivorans CB1190 10364232 YP_004332455.1 CDS Psed_2397 NC_015312.1 2542357 2543379 D KEGG: ami:Amir_2567 acyl-CoA dehydrogenase-related protein; acyl-CoA dehydrogenase-like protein 2542357..2543379 Pseudonocardia dioxanivorans CB1190 10364233 YP_004332456.1 CDS Psed_2398 NC_015312.1 2543487 2544722 D PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; Methyltransferase type 12; KEGG: ami:Amir_2568 LmbE family protein; LmbE family protein 2543487..2544722 Pseudonocardia dioxanivorans CB1190 10364234 YP_004332457.1 CDS Psed_2399 NC_015312.1 2544719 2545528 D KEGG: aau:AAur_3425 glycosyl transferase, group 2 family protein; glycosyl transferase protein 2544719..2545528 Pseudonocardia dioxanivorans CB1190 10364235 YP_004332458.1 CDS Psed_2400 NC_015312.1 2545619 2546164 R PFAM: Ferritin/Dps protein; KEGG: kra:Krad_1159 ferritin Dps family protein; ferritin complement(2545619..2546164) Pseudonocardia dioxanivorans CB1190 10364236 YP_004332459.1 CDS Psed_2401 NC_015312.1 2546445 2547650 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: pth:PTH_2396 transposase and inactivated derivatives; transposase IS116/IS110/IS902 family protein complement(2546445..2547650) Pseudonocardia dioxanivorans CB1190 10364237 YP_004332460.1 CDS Psed_2402 NC_015312.1 2547911 2548600 D KEGG: rxy:Rxyl_2073 hypothetical protein; hypothetical protein 2547911..2548600 Pseudonocardia dioxanivorans CB1190 10364238 YP_004332461.1 CDS Psed_2403 NC_015312.1 2548683 2548895 R KEGG: ank:AnaeK_0832 DNA ligase D; DNA ligase D complement(2548683..2548895) Pseudonocardia dioxanivorans CB1190 10364239 YP_004332462.1 CDS Psed_2405 NC_015312.1 2549534 2550073 R KEGG: scb:SCAB_23781 hypothetical protein; hypothetical protein complement(2549534..2550073) Pseudonocardia dioxanivorans CB1190 10364241 YP_004332463.1 CDS Psed_2406 NC_015312.1 2550211 2551488 R PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type complement(2550211..2551488) Pseudonocardia dioxanivorans CB1190 10364242 YP_004332464.1 CDS Psed_2407 NC_015312.1 2551605 2552282 R KEGG: rop:ROP_00170 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase complement(2551605..2552282) Pseudonocardia dioxanivorans CB1190 10364243 YP_004332465.1 CDS Psed_2408 NC_015312.1 2552314 2553459 R KEGG: sen:SACE_5143 arsenical resistance protein/arsenate reductase; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter; arsenical-resistance protein complement(2552314..2553459) Pseudonocardia dioxanivorans CB1190 10364244 YP_004332466.1 CDS Psed_2409 NC_015312.1 2553456 2553839 R KEGG: amd:AMED_0760 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator complement(2553456..2553839) Pseudonocardia dioxanivorans CB1190 10364245 YP_004332467.1 CDS Psed_2410 NC_015312.1 2554007 2555329 R PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4982 integral membrane transport protein; major facilitator superfamily protein complement(2554007..2555329) Pseudonocardia dioxanivorans CB1190 10364246 YP_004332468.1 CDS Psed_2411 NC_015312.1 2555357 2556718 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sen:SACE_4981 flavin binding monooxygenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2555357..2556718) Pseudonocardia dioxanivorans CB1190 10364247 YP_004332469.1 CDS Psed_2412 NC_015312.1 2556813 2557685 D KEGG: rop:ROP_00080 ArsR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 2556813..2557685 Pseudonocardia dioxanivorans CB1190 10364248 YP_004332470.1 CDS Psed_2413 NC_015312.1 2557730 2557966 R hypothetical protein complement(2557730..2557966) Pseudonocardia dioxanivorans CB1190 10364249 YP_004332471.1 CDS Psed_2414 NC_015312.1 2558119 2558355 D KEGG: kfl:Kfla_3821 hypothetical protein; hypothetical protein 2558119..2558355 Pseudonocardia dioxanivorans CB1190 10364250 YP_004332472.1 CDS Psed_2415 NC_015312.1 2558352 2559023 D KEGG: kra:Krad_0228 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 2558352..2559023 Pseudonocardia dioxanivorans CB1190 10364251 YP_004332473.1 CDS Psed_2416 NC_015312.1 2558954 2559949 R KEGG: sen:SACE_3564 polysulphide reductase, NrfD; polysulfide reductase NrfD complement(2558954..2559949) Pseudonocardia dioxanivorans CB1190 10364252 YP_004332474.1 CDS Psed_2417 NC_015312.1 2560005 2560865 R PFAM: 4Fe-4S binding domain; KEGG: sen:SACE_3563 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin complement(2560005..2560865) Pseudonocardia dioxanivorans CB1190 10364253 YP_004332475.1 CDS Psed_2418 NC_015312.1 2560867 2564103 R KEGG: nda:Ndas_0021 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; manually curated; TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; formate dehydrogenase subunit alpha complement(2560867..2564103) Pseudonocardia dioxanivorans CB1190 10364254 YP_004332476.1 CDS Psed_2419 NC_015312.1 2564145 2564723 R KEGG: amd:AMED_4268 flavodoxin-like protein; flavodoxin-like protein complement(2564145..2564723) Pseudonocardia dioxanivorans CB1190 10364255 YP_004332477.1 CDS Psed_2420 NC_015312.1 2564801 2565805 D KEGG: mjl:Mjls_1517 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 2564801..2565805 Pseudonocardia dioxanivorans CB1190 10364256 YP_004332478.1 CDS Psed_2421 NC_015312.1 2565802 2566578 D PFAM: Methyltransferase type 11; KEGG: mgi:Mflv_3460 methyltransferase type 11; type 11 methyltransferase 2565802..2566578 Pseudonocardia dioxanivorans CB1190 10364257 YP_004332479.1 CDS Psed_2422 NC_015312.1 2566559 2567092 R KEGG: rha:RHA1_ro03148 hypothetical protein; hypothetical protein complement(2566559..2567092) Pseudonocardia dioxanivorans CB1190 10364258 YP_004332480.1 CDS Psed_2423 NC_015312.1 2567161 2567610 D PFAM: Polyketide cyclase/dehydrase; KEGG: ami:Amir_1760 hypothetical protein; polyketide cyclase/dehydrase 2567161..2567610 Pseudonocardia dioxanivorans CB1190 10364259 YP_004332481.1 CDS Psed_2424 NC_015312.1 2567607 2569205 D PFAM: FAD dependent oxidoreductase; KEGG: amd:AMED_4286 FAD-dependent oxidoreductase; FAD dependent oxidoreductase 2567607..2569205 Pseudonocardia dioxanivorans CB1190 10364260 YP_004332482.1 CDS Psed_2425 NC_015312.1 2569364 2570185 D KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; FliA/WhiG subfamily RNA polymerase sigma-28 subunit 2569364..2570185 Pseudonocardia dioxanivorans CB1190 10364261 YP_004332483.1 CDS Psed_2426 NC_015312.1 2570198 2570527 R hypothetical protein complement(2570198..2570527) Pseudonocardia dioxanivorans CB1190 10364262 YP_004332484.1 CDS Psed_2427 NC_015312.1 2570655 2572460 D KEGG: amd:AMED_3305 pyruvate dehydrogenase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase 2570655..2572460 Pseudonocardia dioxanivorans CB1190 10364263 YP_004332485.1 CDS Psed_2428 NC_015312.1 2572632 2573474 D KEGG: gbm:Gbem_0994 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2572632..2573474 Pseudonocardia dioxanivorans CB1190 10364264 YP_004332486.1 CDS Psed_2429 NC_015312.1 2573570 2573932 R KEGG: sro:Sros_9028 hypothetical protein; hypothetical protein complement(2573570..2573932) Pseudonocardia dioxanivorans CB1190 10364265 YP_004332487.1 CDS Psed_2430 NC_015312.1 2573999 2574793 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0850 short-chain dehydrogenase/reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(2573999..2574793) Pseudonocardia dioxanivorans CB1190 10364266 YP_004332488.1 CDS Psed_2431 NC_015312.1 2574905 2575891 R KEGG: sma:SAV_654 oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; pyridoxine 4-dehydrogenase complement(2574905..2575891) Pseudonocardia dioxanivorans CB1190 10364267 YP_004332489.1 CDS Psed_2432 NC_015312.1 2575992 2576849 D KEGG: sma:SAV_655 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2575992..2576849 Pseudonocardia dioxanivorans CB1190 10364268 YP_004332490.1 CDS Psed_2433 NC_015312.1 2576897 2577505 R PFAM: Uncharacterised protein family YphA; KEGG: sco:SCO0201 integral membrane protein SCJ1213c; DoxX family protein complement(2576897..2577505) Pseudonocardia dioxanivorans CB1190 10364269 YP_004332491.1 CDS Psed_2434 NC_015312.1 2577724 2579484 D KEGG: fre:Franean1_1969 GAF sensor signal transduction histidine kinase; PFAM: GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: GAF; GAF sensor signal transduction histidine kinase 2577724..2579484 Pseudonocardia dioxanivorans CB1190 10364270 YP_004332492.1 CDS Psed_2435 NC_015312.1 2579524 2579727 R KEGG: cai:Caci_6674 hypothetical protein; hypothetical protein complement(2579524..2579727) Pseudonocardia dioxanivorans CB1190 10364271 YP_004332493.1 CDS Psed_2436 NC_015312.1 2580151 2581125 R PFAM: Nitroreductase-like; KEGG: ami:Amir_2414 nitroreductase; nitroreductase complement(2580151..2581125) Pseudonocardia dioxanivorans CB1190 10364272 YP_004332494.1 CDS Psed_2437 NC_015312.1 2581276 2581857 R PFAM: Cystathionine beta-synthase, core; KEGG: mka:MK1245 CBS domain-containing protein; CBS domain-containing protein complement(2581276..2581857) Pseudonocardia dioxanivorans CB1190 10364273 YP_004332495.1 CDS Psed_2438 NC_015312.1 2582001 2583845 D PFAM: FAD dependent oxidoreductase; KEGG: afv:AFLA_059740 hypothetical protein; FAD dependent oxidoreductase 2582001..2583845 Pseudonocardia dioxanivorans CB1190 10364274 YP_004332496.1 CDS Psed_2439 NC_015312.1 2583937 2586090 D KEGG: amd:AMED_3027 penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase 2583937..2586090 Pseudonocardia dioxanivorans CB1190 10364275 YP_004332497.1 CDS Psed_2440 NC_015312.1 2586188 2587000 R PFAM: Alpha/beta hydrolase fold-1; KEGG: gob:Gobs_1039 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(2586188..2587000) Pseudonocardia dioxanivorans CB1190 10364276 YP_004332498.1 CDS Psed_2441 NC_015312.1 2587038 2588552 R KEGG: gob:Gobs_1040 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2587038..2588552) Pseudonocardia dioxanivorans CB1190 10364277 YP_004332499.1 CDS Psed_2442 NC_015312.1 2588693 2590456 D KEGG: gob:Gobs_1836 GAF modulated sigma54 specific transcriptional regulator, Fis family; manually curated; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; Fis family transcriptional regulator 2588693..2590456 Pseudonocardia dioxanivorans CB1190 10364278 YP_004332500.1 CDS Psed_2443 NC_015312.1 2590540 2590875 R KEGG: amd:AMED_0570 hypothetical protein; hypothetical protein complement(2590540..2590875) Pseudonocardia dioxanivorans CB1190 10364279 YP_004332501.1 CDS Psed_2444 NC_015312.1 2591089 2592390 D KEGG: nml:Namu_4674 peptidase S1 and S6 chymotrypsin/Hap; PFAM: PDZ/DHR/GLGF; Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 2591089..2592390 Pseudonocardia dioxanivorans CB1190 10364280 YP_004332502.1 CDS Psed_2445 NC_015312.1 2592759 2593967 D PFAM: Cation/H+ exchanger; KEGG: nml:Namu_0334 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2592759..2593967 Pseudonocardia dioxanivorans CB1190 10364281 YP_004332503.1 CDS Psed_2446 NC_015312.1 2594065 2594835 D PFAM: Crotonase, core; KEGG: fal:FRAAL2442 enoyl CoA dehydratase/isomerase; enoyl-CoA hydratase 2594065..2594835 Pseudonocardia dioxanivorans CB1190 10364282 YP_004332504.1 CDS Psed_2447 NC_015312.1 2594887 2595225 R hypothetical protein complement(2594887..2595225) Pseudonocardia dioxanivorans CB1190 10364283 YP_004332505.1 CDS Psed_2448 NC_015312.1 2595604 2597268 D KEGG: aac:Aaci_2310 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2595604..2597268 Pseudonocardia dioxanivorans CB1190 10364284 YP_004332506.1 CDS Psed_2449 NC_015312.1 2597265 2597870 D PFAM: Isochorismatase-like; KEGG: met:M446_1936 isochorismatase hydrolase; isochorismatase hydrolase 2597265..2597870 Pseudonocardia dioxanivorans CB1190 10364285 YP_004332507.1 CDS Psed_2450 NC_015312.1 2597867 2598601 D KEGG: sma:SAV_4857 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2597867..2598601 Pseudonocardia dioxanivorans CB1190 10364286 YP_004332508.1 CDS Psed_2451 NC_015312.1 2598565 2598678 D hypothetical protein 2598565..2598678 Pseudonocardia dioxanivorans CB1190 10364287 YP_004332509.1 CDS Psed_2452 NC_015312.1 2598834 2600246 D PFAM: Amidase; KEGG: sna:Snas_3274 amidase; amidase 2598834..2600246 Pseudonocardia dioxanivorans CB1190 10364288 YP_004332510.1 CDS Psed_2453 NC_015312.1 2600258 2601508 R PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 complement(2600258..2601508) Pseudonocardia dioxanivorans CB1190 10364289 YP_004332511.1 CDS Psed_2454 NC_015312.1 2601760 2602056 D hypothetical protein 2601760..2602056 Pseudonocardia dioxanivorans CB1190 10364290 YP_004332512.1 CDS Psed_2455 NC_015312.1 2602112 2602882 R KEGG: kra:Krad_2500 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(2602112..2602882) Pseudonocardia dioxanivorans CB1190 10364291 YP_004332513.1 CDS Psed_2456 NC_015312.1 2602875 2603120 R hypothetical protein complement(2602875..2603120) Pseudonocardia dioxanivorans CB1190 10364292 YP_004332514.1 CDS Psed_2457 NC_015312.1 2603117 2605114 R PFAM: Hydantoinase B/oxoprolinase; KEGG: cwo:Cwoe_2300 5-oxoprolinase (ATP-hydrolyzing); hydantoinase B/oxoprolinase complement(2603117..2605114) Pseudonocardia dioxanivorans CB1190 10364293 YP_004332515.1 CDS Psed_2458 NC_015312.1 2605111 2607162 R KEGG: sti:Sthe_2892 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase complement(2605111..2607162) Pseudonocardia dioxanivorans CB1190 10364294 YP_004332516.1 CDS Psed_2459 NC_015312.1 2607309 2609111 R KEGG: msm:MSMEG_4044 GAF domain-containing protein; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR complement(2607309..2609111) Pseudonocardia dioxanivorans CB1190 10364295 YP_004332517.1 CDS Psed_2460 NC_015312.1 2609169 2609816 D KEGG: mab:MAB_1600c hypothetical protein; hypothetical protein 2609169..2609816 Pseudonocardia dioxanivorans CB1190 10364296 YP_004332518.1 CDS Psed_2461 NC_015312.1 2609813 2609947 D hypothetical protein 2609813..2609947 Pseudonocardia dioxanivorans CB1190 10364297 YP_004332519.1 CDS Psed_2462 NC_015312.1 2610318 2611340 D KEGG: pla:Plav_3077 hypothetical protein; hypothetical protein 2610318..2611340 Pseudonocardia dioxanivorans CB1190 10364298 YP_004332520.1 CDS Psed_2463 NC_015312.1 2611340 2612944 D KEGG: xau:Xaut_1704 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2611340..2612944 Pseudonocardia dioxanivorans CB1190 10364299 YP_004332521.1 CDS Psed_2464 NC_015312.1 2613082 2614509 R PFAM: Glycine cleavage T-protein, N-terminal; KEGG: svi:Svir_11650 aminomethyltransferase; glycine cleavage T protein (aminomethyl transferase) complement(2613082..2614509) Pseudonocardia dioxanivorans CB1190 10364300 YP_004332522.1 CDS Psed_2465 NC_015312.1 2614806 2615165 D PFAM: Extradiol ring-cleavage dioxygenase LigAB, LigA subunit; KEGG: svi:Svir_38370 protocatechuate 4,5-dioxygenase alpha subunit; extradiol ring-cleavage dioxygenase class III protein subunit A 2614806..2615165 Pseudonocardia dioxanivorans CB1190 10364301 YP_004332523.1 CDS Psed_2466 NC_015312.1 2615158 2616015 D KEGG: svi:Svir_38360 protocatechuate 4,5-dioxygenase beta subunit; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; protocatechuate 4,5-dioxygenase 2615158..2616015 Pseudonocardia dioxanivorans CB1190 10364302 YP_004332524.1 CDS Psed_2467 NC_015312.1 2616234 2617052 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: amd:AMED_2250 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2616234..2617052 Pseudonocardia dioxanivorans CB1190 10364303 YP_004332525.1 CDS Psed_2468 NC_015312.1 2617057 2618070 R PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: pzu:PHZ_c3010 adenosine deaminase; adenosine deaminase complement(2617057..2618070) Pseudonocardia dioxanivorans CB1190 10364304 YP_004332526.1 CDS Psed_2469 NC_015312.1 2618094 2618816 R KEGG: cwo:Cwoe_0946 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(2618094..2618816) Pseudonocardia dioxanivorans CB1190 10364305 YP_004332527.1 CDS Psed_2470 NC_015312.1 2618861 2619754 R PFAM: NADP-dependent oxidoreductase domain; KEGG: cai:Caci_5118 aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein complement(2618861..2619754) Pseudonocardia dioxanivorans CB1190 10364306 YP_004332528.1 CDS Psed_2471 NC_015312.1 2619838 2620398 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mpa:MAP4047 hypothetical protein; TetR family transcriptional regulator 2619838..2620398 Pseudonocardia dioxanivorans CB1190 10364307 YP_004332529.1 CDS Psed_2472 NC_015312.1 2620379 2621143 R KEGG: kra:Krad_4116 Cna B domain protein; Cna B domain-containing protein complement(2620379..2621143) Pseudonocardia dioxanivorans CB1190 10364308 YP_004332530.1 CDS Psed_2473 NC_015312.1 2621140 2622909 R PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_3472 major facilitator transporter; major facilitator superfamily protein complement(2621140..2622909) Pseudonocardia dioxanivorans CB1190 10364309 YP_004332531.1 CDS Psed_2474 NC_015312.1 2623103 2623759 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_3455 TetR family transcriptional regulator; TetR family transcriptional regulator 2623103..2623759 Pseudonocardia dioxanivorans CB1190 10364310 YP_004332532.1 CDS Psed_2475 NC_015312.1 2623931 2624296 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll7906 ferredoxin; Rieske (2Fe-2S) domain-containing protein complement(2623931..2624296) Pseudonocardia dioxanivorans CB1190 10364311 YP_004332533.1 CDS Psed_2476 NC_015312.1 2624293 2625150 R KEGG: cfl:Cfla_0281 fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase complement(2624293..2625150) Pseudonocardia dioxanivorans CB1190 10364312 YP_004332534.1 CDS Psed_2477 NC_015312.1 2625160 2626443 R PFAM: Peptidase M24, structural domain; KEGG: rpb:RPB_4421 peptidase M24; peptidase M24 complement(2625160..2626443) Pseudonocardia dioxanivorans CB1190 10364313 YP_004332535.1 CDS Psed_2478 NC_015312.1 2626480 2627667 R PFAM: Amidohydrolase 2; KEGG: rlt:Rleg2_6338 amidohydrolase 2; amidohydrolase complement(2626480..2627667) Pseudonocardia dioxanivorans CB1190 10364314 YP_004332536.1 CDS Psed_2479 NC_015312.1 2627669 2628568 R PFAM: Luciferase-like, subgroup; KEGG: nfa:nfa32900 hypothetical protein; luciferase-like protein complement(2627669..2628568) Pseudonocardia dioxanivorans CB1190 10364315 YP_004332537.1 CDS Psed_2480 NC_015312.1 2628558 2629031 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_1616 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2628558..2629031) Pseudonocardia dioxanivorans CB1190 10364316 YP_004332538.1 CDS Psed_2481 NC_015312.1 2629028 2629843 R KEGG: sro:Sros_3030 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(2629028..2629843) Pseudonocardia dioxanivorans CB1190 10364317 YP_004332539.1 CDS Psed_2482 NC_015312.1 2629891 2630754 R PFAM: ABC transporter permease; KEGG: rpt:Rpal_1423 inner-membrane translocator; ABC transporter permease complement(2629891..2630754) Pseudonocardia dioxanivorans CB1190 10364318 YP_004332540.1 CDS Psed_2483 NC_015312.1 2630774 2632006 R PFAM: Extracellular ligand-binding receptor; KEGG: adg:Adeg_1594 extracellular ligand-binding receptor; ABC transporter substrate-binding protein complement(2630774..2632006) Pseudonocardia dioxanivorans CB1190 10364319 YP_004332541.1 CDS Psed_2484 NC_015312.1 2632081 2633955 R KEGG: bge:BC1002_6024 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter permease; SMART: ATPase, AAA+ type, core; ABC transporter complement(2632081..2633955) Pseudonocardia dioxanivorans CB1190 10364320 YP_004332542.1 CDS Psed_2485 NC_015312.1 2634172 2634765 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pjd:Pjdr2_0210 transcriptional regulator, TetR family; TetR family transcriptional regulator 2634172..2634765 Pseudonocardia dioxanivorans CB1190 10364321 YP_004332543.1 CDS Psed_2486 NC_015312.1 2635002 2635463 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 2635002..2635463 Pseudonocardia dioxanivorans CB1190 10364322 YP_004332544.1 CDS Psed_2487 NC_015312.1 2635467 2636399 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mno:Mnod_3485 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2635467..2636399) Pseudonocardia dioxanivorans CB1190 10364323 YP_004332545.1 CDS Psed_2488 NC_015312.1 2636477 2637109 D KEGG: nca:Noca_0418 ribonuclease H; PFAM: Ribonuclease H domain; Ribonuclease H 2636477..2637109 Pseudonocardia dioxanivorans CB1190 10364324 YP_004332546.1 CDS Psed_2489 NC_015312.1 2637286 2638341 R KEGG: sco:SCO7720 hypothetical protein; hypothetical protein complement(2637286..2638341) Pseudonocardia dioxanivorans CB1190 10364325 YP_004332547.1 CDS Psed_2490 NC_015312.1 2638458 2639105 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO7719 TetR family transcriptional regulator; TetR family transcriptional regulator 2638458..2639105 Pseudonocardia dioxanivorans CB1190 10364326 YP_004332548.1 CDS Psed_2491 NC_015312.1 2639166 2639915 R KEGG: rca:Rcas_2128 protein serine/threonine phosphatase; hypothetical protein complement(2639166..2639915) Pseudonocardia dioxanivorans CB1190 10364327 YP_004332549.1 CDS Psed_2492 NC_015312.1 2640054 2641016 R KEGG: mgi:Mflv_1496 hypothetical protein; hypothetical protein complement(2640054..2641016) Pseudonocardia dioxanivorans CB1190 10364328 YP_004332550.1 CDS Psed_2493 NC_015312.1 2641456 2641653 R hypothetical protein complement(2641456..2641653) Pseudonocardia dioxanivorans CB1190 10364329 YP_004332551.1 CDS Psed_2494 NC_015312.1 2641781 2642908 D KEGG: rpt:Rpal_3952 thiolase; thiolase 2641781..2642908 Pseudonocardia dioxanivorans CB1190 10364330 YP_004332552.1 CDS Psed_2495 NC_015312.1 2642905 2643210 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: vei:Veis_4005 hypothetical protein; hypothetical protein 2642905..2643210 Pseudonocardia dioxanivorans CB1190 10364331 YP_004332553.1 CDS Psed_2496 NC_015312.1 2643250 2644167 R PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: rop:ROP_13650 hypothetical protein; hypothetical protein complement(2643250..2644167) Pseudonocardia dioxanivorans CB1190 10364332 YP_004332554.1 CDS Psed_2497 NC_015312.1 2644179 2645078 R PFAM: cyclase; KEGG: nca:Noca_1165 cyclase protein; cyclase complement(2644179..2645078) Pseudonocardia dioxanivorans CB1190 10364333 YP_004332555.1 CDS Psed_2498 NC_015312.1 2645075 2647525 R KEGG: sti:Sthe_2310 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(2645075..2647525) Pseudonocardia dioxanivorans CB1190 10364334 YP_004332556.1 CDS Psed_2499 NC_015312.1 2647522 2648046 R KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(2647522..2648046) Pseudonocardia dioxanivorans CB1190 10364335 YP_004332557.1 CDS Psed_2500 NC_015312.1 2648039 2648935 R KEGG: tro:trd_A0777 carbon monoxide dehydrogenase medium chain (CO dehydrogenase subunit M) (CO-DH M); PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase complement(2648039..2648935) Pseudonocardia dioxanivorans CB1190 10364336 YP_004332558.1 CDS Psed_2501 NC_015312.1 2648980 2649663 R KEGG: tro:trd_A0077 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(2648980..2649663) Pseudonocardia dioxanivorans CB1190 10364337 YP_004332559.1 CDS Psed_2502 NC_015312.1 2649901 2650611 R KEGG: mva:Mvan_5250 hypothetical protein; hypothetical protein complement(2649901..2650611) Pseudonocardia dioxanivorans CB1190 10364338 YP_004332560.1 CDS Psed_2503 NC_015312.1 2650711 2651598 R PFAM: Crotonase, core; KEGG: lch:Lcho_2453 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase complement(2650711..2651598) Pseudonocardia dioxanivorans CB1190 10364339 YP_004332561.1 CDS Psed_2505 NC_015312.1 2652293 2653144 D KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; SigB/F/G subfamily RNA polymerase sigma-28 subunit 2652293..2653144 Pseudonocardia dioxanivorans CB1190 10364341 YP_004332562.1 CDS Psed_2506 NC_015312.1 2653149 2654504 R KEGG: msp:Mspyr1_05110 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase complement(2653149..2654504) Pseudonocardia dioxanivorans CB1190 10364342 YP_004332563.1 CDS Psed_2507 NC_015312.1 2654609 2655529 D PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: ami:Amir_4893 transcriptional regulator, LysR family; LysR family transcriptional regulator 2654609..2655529 Pseudonocardia dioxanivorans CB1190 10364343 YP_004332564.1 CDS Psed_2508 NC_015312.1 2655526 2656488 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: rrs:RoseRS_2516 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 2655526..2656488 Pseudonocardia dioxanivorans CB1190 10364344 YP_004332565.1 CDS Psed_2509 NC_015312.1 2656488 2657270 D PFAM: cyclase; KEGG: nfa:nfa32670 cyclase; cyclase 2656488..2657270 Pseudonocardia dioxanivorans CB1190 10364345 YP_004332566.1 CDS Psed_2510 NC_015312.1 2657321 2658847 D PFAM: Aldehyde dehydrogenase domain; KEGG: tcu:Tcur_0539 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 2657321..2658847 Pseudonocardia dioxanivorans CB1190 10364346 YP_004332567.1 CDS Psed_2511 NC_015312.1 2658849 2659256 D PFAM: 4-oxalocrotonate tautomerase; KEGG: gbr:Gbro_0235 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2658849..2659256 Pseudonocardia dioxanivorans CB1190 10364347 YP_004332568.1 CDS Psed_2512 NC_015312.1 2659303 2660043 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_3809 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2659303..2660043) Pseudonocardia dioxanivorans CB1190 10364348 YP_004332569.1 CDS Psed_2513 NC_015312.1 2660040 2660696 R KEGG: rlt:Rleg2_4436 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(2660040..2660696) Pseudonocardia dioxanivorans CB1190 10364349 YP_004332570.1 CDS Psed_2514 NC_015312.1 2660897 2662669 D PFAM: PEP-utilising enzyme, mobile domain; KEGG: tcu:Tcur_0540 PEP-utilising protein mobile region; PEP-utilizing protein mobile subunit 2660897..2662669 Pseudonocardia dioxanivorans CB1190 10364350 YP_004332571.1 CDS Psed_2515 NC_015312.1 2662666 2663766 D KEGG: tpe:Tpen_0588 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; pyruvate, water dikinase 2662666..2663766 Pseudonocardia dioxanivorans CB1190 10364351 YP_004332572.1 CDS Psed_2516 NC_015312.1 2663817 2664338 R PFAM: Peroxiredoxin, OsmC-like protein; KEGG: nfa:nfa53120 hypothetical protein; OsmC family protein complement(2663817..2664338) Pseudonocardia dioxanivorans CB1190 10364352 YP_004332573.1 CDS Psed_2517 NC_015312.1 2664666 2665574 R KEGG: mva:Mvan_0261 luciferase protein; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4879, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(2664666..2665574) Pseudonocardia dioxanivorans CB1190 10364353 YP_004332574.1 CDS Psed_2518 NC_015312.1 2665589 2666386 R KEGG: aac:Aaci_2531 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(2665589..2666386) Pseudonocardia dioxanivorans CB1190 10364354 YP_004332575.1 CDS Psed_2519 NC_015312.1 2666460 2667716 D KEGG: aeh:Mlg_2359 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase 2666460..2667716 Pseudonocardia dioxanivorans CB1190 10364355 YP_004332576.1 CDS Psed_2520 NC_015312.1 2667713 2667955 D hypothetical protein 2667713..2667955 Pseudonocardia dioxanivorans CB1190 10364356 YP_004332577.1 CDS Psed_2521 NC_015312.1 2668061 2668477 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: nde:NIDE2482 dioxygenase, ferredoxin subunit; Rieske (2Fe-2S) domain-containing protein complement(2668061..2668477) Pseudonocardia dioxanivorans CB1190 10364357 YP_004332578.1 CDS Psed_2522 NC_015312.1 2668474 2668677 R KEGG: aac:Aaci_1617 4-oxalocrotonate tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase, bacteria/archaea; PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(2668474..2668677) Pseudonocardia dioxanivorans CB1190 10364358 YP_004332579.1 CDS Psed_2523 NC_015312.1 2668696 2669454 R KEGG: pth:PTH_0481 2-keto-4-pentenoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase complement(2668696..2669454) Pseudonocardia dioxanivorans CB1190 10364359 YP_004332580.1 CDS Psed_2524 NC_015312.1 2669451 2670254 R KEGG: nml:Namu_4085 2-oxopent-4-enoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase complement(2669451..2670254) Pseudonocardia dioxanivorans CB1190 10364360 YP_004332581.1 CDS Psed_2525 NC_015312.1 2670343 2671137 R KEGG: tcu:Tcur_0533 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(2670343..2671137) Pseudonocardia dioxanivorans CB1190 10364361 YP_004332582.1 CDS Psed_2526 NC_015312.1 2671134 2671847 R hypothetical protein complement(2671134..2671847) Pseudonocardia dioxanivorans CB1190 10364362 YP_004332583.1 CDS Psed_2527 NC_015312.1 2671965 2672879 D TIGRFAM: Catechol 2,3 dioxygenase; KEGG: bts:Btus_0957 catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; catechol 2,3 dioxygenase 2671965..2672879 Pseudonocardia dioxanivorans CB1190 10364363 YP_004332584.1 CDS Psed_2528 NC_015312.1 2672950 2673879 D TIGRFAM: Catechol 2,3 dioxygenase; KEGG: bts:Btus_0957 catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; catechol 2,3 dioxygenase 2672950..2673879 Pseudonocardia dioxanivorans CB1190 10364364 YP_004332585.1 CDS Psed_2529 NC_015312.1 2673876 2674928 D PFAM: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 2673876..2674928 Pseudonocardia dioxanivorans CB1190 10364365 YP_004332586.1 CDS Psed_2530 NC_015312.1 2674933 2675781 D KEGG: tcu:Tcur_0533 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 2674933..2675781 Pseudonocardia dioxanivorans CB1190 10364366 YP_004332587.1 CDS Psed_2531 NC_015312.1 2675836 2676309 R KEGG: fri:FraEuI1c_4130 hypothetical protein; hypothetical protein complement(2675836..2676309) Pseudonocardia dioxanivorans CB1190 10364367 YP_004332588.1 CDS Psed_2532 NC_015312.1 2676371 2676994 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_9036 transcriptional regulator, TetR family; TetR family transcriptional regulator 2676371..2676994 Pseudonocardia dioxanivorans CB1190 10364368 YP_004332589.1 CDS Psed_2533 NC_015312.1 2677035 2678192 R PFAM: Methionine synthase, vitamin-B12 independent; KEGG: ske:Sked_37200 methionine synthase II; vitamin-B12 independent methionine synthase complement(2677035..2678192) Pseudonocardia dioxanivorans CB1190 10364369 YP_004332590.1 CDS Psed_2534 NC_015312.1 2678273 2678884 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bts:Btus_0118 transcriptional regulator, TetR family; TetR family transcriptional regulator 2678273..2678884 Pseudonocardia dioxanivorans CB1190 10364370 YP_004332591.1 CDS Psed_2535 NC_015312.1 2678927 2680135 R KEGG: rrs:RoseRS_0765 cytochrome P450; PFAM: Cytochrome P450; peroxidase complement(2678927..2680135) Pseudonocardia dioxanivorans CB1190 10364371 YP_004332592.1 CDS Psed_2536 NC_015312.1 2680132 2681262 R KEGG: rop:ROP_29670 acetyl-CoA acyltransferase; propanoyl-CoA C-acyltransferase complement(2680132..2681262) Pseudonocardia dioxanivorans CB1190 10364372 YP_004332593.1 CDS Psed_2537 NC_015312.1 2681259 2681675 R PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: rop:ROP_29680 hypothetical protein; hypothetical protein complement(2681259..2681675) Pseudonocardia dioxanivorans CB1190 10364373 YP_004332594.1 CDS Psed_2538 NC_015312.1 2681863 2682972 D PFAM: Luciferase-like, subgroup; KEGG: sco:SCP1.240c monooxygenase, mmyo; luciferase-like protein 2681863..2682972 Pseudonocardia dioxanivorans CB1190 10364374 YP_004332595.1 CDS Psed_2539 NC_015312.1 2682972 2683805 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_3937 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 2682972..2683805 Pseudonocardia dioxanivorans CB1190 10364375 YP_004332596.1 CDS Psed_2540 NC_015312.1 2683809 2685350 D KEGG: fra:Francci3_2245 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2683809..2685350 Pseudonocardia dioxanivorans CB1190 10364376 YP_004332597.1 CDS Psed_2541 NC_015312.1 2685359 2686720 D KEGG: mpd:MCP_1725 phenylacetate-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase; phenylacetate--CoA ligase 2685359..2686720 Pseudonocardia dioxanivorans CB1190 10364377 YP_004332598.1 CDS Psed_2542 NC_015312.1 2686814 2688049 R KEGG: nml:Namu_0834 membrane dipeptidase; PFAM: Peptidase M19, renal dipeptidase; membrane dipeptidase complement(2686814..2688049) Pseudonocardia dioxanivorans CB1190 10364378 YP_004332599.1 CDS Psed_2543 NC_015312.1 2688254 2688520 D hypothetical protein 2688254..2688520 Pseudonocardia dioxanivorans CB1190 10364379 YP_004332600.1 CDS Psed_2544 NC_015312.1 2688646 2689359 R PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: fri:FraEuI1c_6883 glutamine amidotransferase class-I; glutamine amidotransferase complement(2688646..2689359) Pseudonocardia dioxanivorans CB1190 10364380 YP_004332601.1 CDS Psed_2545 NC_015312.1 2689352 2690401 R KEGG: msm:MSMEG_5373 nitrilase 2; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase complement(2689352..2690401) Pseudonocardia dioxanivorans CB1190 10364381 YP_004332602.1 CDS Psed_2546 NC_015312.1 2690403 2691836 R PFAM: Glutamine synthetase, catalytic domain; KEGG: msm:MSMEG_5374 glutamate--ammonia ligase; glutamine synthetase catalytic subunit complement(2690403..2691836) Pseudonocardia dioxanivorans CB1190 10364382 YP_004332603.1 CDS Psed_2547 NC_015312.1 2691887 2692363 R PFAM: Protein of unknown function DUF1097; KEGG: vei:Veis_4948 glutathione-regulated potassium-efflux system protein; hypothetical protein complement(2691887..2692363) Pseudonocardia dioxanivorans CB1190 10364383 YP_004332604.1 CDS Psed_2548 NC_015312.1 2692695 2693435 D KEGG: msm:MSMEG_5375 GntR-family protein transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2692695..2693435 Pseudonocardia dioxanivorans CB1190 10364384 YP_004332605.1 CDS Psed_2549 NC_015312.1 2693456 2694838 R TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: rop:ROP_15050 L-serine dehydratase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; L-serine dehydratase 1 complement(2693456..2694838) Pseudonocardia dioxanivorans CB1190 10364385 YP_004332606.1 CDS Psed_2550 NC_015312.1 2694845 2696134 R KEGG: rop:ROP_26570 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(2694845..2696134) Pseudonocardia dioxanivorans CB1190 10364386 YP_004332607.1 CDS Psed_2551 NC_015312.1 2696140 2696538 R TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: mmi:MMAR_0209 glycine cleavage system H protein GcvH_1; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein complement(2696140..2696538) Pseudonocardia dioxanivorans CB1190 10364387 YP_004332608.1 CDS Psed_2552 NC_015312.1 2696572 2697684 R PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: rop:ROP_26550 glycine cleavage system aminomethyltransferase T; glycine cleavage system protein T complement(2696572..2697684) Pseudonocardia dioxanivorans CB1190 10364388 YP_004332609.1 CDS Psed_2553 NC_015312.1 2697681 2700524 R TIGRFAM: Glycine cleavage system P protein, homodimeric; HAMAP: Glycine cleavage system P protein, homodimeric; KEGG: rop:ROP_26540 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; Aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase complement(2697681..2700524) Pseudonocardia dioxanivorans CB1190 10364389 YP_004332610.1 CDS Psed_2554 NC_015312.1 2701322 2703172 R PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: ami:Amir_3695 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase complement(2701322..2703172) Pseudonocardia dioxanivorans CB1190 10364390 YP_004332611.1 CDS Psed_2555 NC_015312.1 2703401 2704021 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_C0598 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2703401..2704021 Pseudonocardia dioxanivorans CB1190 10364391 YP_004332612.1 CDS Psed_2556 NC_015312.1 2704018 2704818 D KEGG: lch:Lcho_1200 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2704018..2704818 Pseudonocardia dioxanivorans CB1190 10364392 YP_004332613.1 CDS Psed_2557 NC_015312.1 2704815 2705741 D PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: cyj:Cyan7822_4323 hypothetical protein; hypothetical protein 2704815..2705741 Pseudonocardia dioxanivorans CB1190 10364393 YP_004332614.1 CDS Psed_2558 NC_015312.1 2705876 2706946 R PFAM: Cytochrome P450; KEGG: bur:Bcep18194_C7583 cytochrome P450-like; cytochrome P450 complement(2705876..2706946) Pseudonocardia dioxanivorans CB1190 10364394 YP_004332615.1 CDS Psed_2559 NC_015312.1 2706943 2709300 R KEGG: fre:Franean1_4699 carbon-monoxide dehydrogenase (acceptor); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(2706943..2709300) Pseudonocardia dioxanivorans CB1190 10364395 YP_004332616.1 CDS Psed_2560 NC_015312.1 2709300 2709809 R KEGG: sti:Sthe_0231 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(2709300..2709809) Pseudonocardia dioxanivorans CB1190 10364396 YP_004332617.1 CDS Psed_2561 NC_015312.1 2709806 2710681 R KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase complement(2709806..2710681) Pseudonocardia dioxanivorans CB1190 10364397 YP_004332618.1 CDS Psed_2562 NC_015312.1 2710872 2711720 D KEGG: bxe:Bxe_A3609 hypothetical protein; hypothetical protein 2710872..2711720 Pseudonocardia dioxanivorans CB1190 10364398 YP_004332619.1 CDS Psed_2563 NC_015312.1 2711717 2712376 D KEGG: etr:ETAE_0966 hypothetical protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 2711717..2712376 Pseudonocardia dioxanivorans CB1190 10364399 YP_004332620.1 CDS Psed_2564 NC_015312.1 2712355 2712900 R KEGG: tfu:Tfu_1296 hypothetical protein; hypothetical protein complement(2712355..2712900) Pseudonocardia dioxanivorans CB1190 10364400 YP_004332621.1 CDS Psed_2565 NC_015312.1 2712974 2713729 D KEGG: tfu:Tfu_1299 dihydroxynaphthoic acid synthase; PFAM: Crotonase, core; naphthoate synthase 2712974..2713729 Pseudonocardia dioxanivorans CB1190 10364401 YP_004332622.1 CDS Psed_2566 NC_015312.1 2713726 2715357 D KEGG: tfu:Tfu_1300 DitJ-like CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 2713726..2715357 Pseudonocardia dioxanivorans CB1190 10364402 YP_004332623.1 CDS Psed_2567 NC_015312.1 2715433 2717019 R PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: htu:Htur_3820 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(2715433..2717019) Pseudonocardia dioxanivorans CB1190 10364403 YP_004332624.1 CDS Psed_2568 NC_015312.1 2717037 2718242 R PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A2750 branched chain amino acid ABC transporter periplasmic ligand-binding protein; ABC transporter substrate-binding protein complement(2717037..2718242) Pseudonocardia dioxanivorans CB1190 10364404 YP_004332625.1 CDS Psed_2569 NC_015312.1 2718442 2719353 D PFAM: ABC transporter permease; KEGG: sth:STH802 branched-chain amino acid ABC transporter permease; ABC transporter permease 2718442..2719353 Pseudonocardia dioxanivorans CB1190 10364405 YP_004332626.1 CDS Psed_2570 NC_015312.1 2719350 2721230 D PFAM: ABC transporter-like; ABC transporter permease; KEGG: sti:Sthe_2800 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 2719350..2721230 Pseudonocardia dioxanivorans CB1190 10364406 YP_004332627.1 CDS Psed_2571 NC_015312.1 2721220 2721945 D KEGG: cwo:Cwoe_0429 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2721220..2721945 Pseudonocardia dioxanivorans CB1190 10364407 YP_004332628.1 CDS Psed_2572 NC_015312.1 2722028 2723209 D TIGRFAM: Thiolase; KEGG: cti:RALTA_A1580 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase); PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 2722028..2723209 Pseudonocardia dioxanivorans CB1190 10364408 YP_004332629.1 CDS Psed_2573 NC_015312.1 2723223 2723987 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_5155 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 2723223..2723987 Pseudonocardia dioxanivorans CB1190 10364409 YP_004332630.1 CDS Psed_2574 NC_015312.1 2723984 2724790 D PFAM: Crotonase, core; KEGG: gob:Gobs_2232 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 2723984..2724790 Pseudonocardia dioxanivorans CB1190 10364410 YP_004332631.1 CDS Psed_2575 NC_015312.1 2724843 2725970 R KEGG: tfu:Tfu_1282 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase complement(2724843..2725970) Pseudonocardia dioxanivorans CB1190 10364411 YP_004332632.1 CDS Psed_2576 NC_015312.1 2726101 2726859 D PFAM: Carboxymuconolactone decarboxylase; KEGG: sjp:SJA_C1-02580 hypothetical protein; carboxymuconolactone decarboxylase 2726101..2726859 Pseudonocardia dioxanivorans CB1190 10364412 YP_004332633.1 CDS Psed_2577 NC_015312.1 2727076 2727849 D KEGG: tfu:Tfu_1277 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2727076..2727849 Pseudonocardia dioxanivorans CB1190 10364413 YP_004332634.1 CDS Psed_2578 NC_015312.1 2728070 2728939 D KEGG: bxe:Bxe_A3609 hypothetical protein; hypothetical protein 2728070..2728939 Pseudonocardia dioxanivorans CB1190 10364414 YP_004332635.1 CDS Psed_2579 NC_015312.1 2728944 2729357 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: amd:AMED_3868 hypothetical protein; hypothetical protein 2728944..2729357 Pseudonocardia dioxanivorans CB1190 10364415 YP_004332636.1 CDS Psed_2580 NC_015312.1 2729354 2730511 D KEGG: amd:AMED_3867 hypothetical protein; hypothetical protein 2729354..2730511 Pseudonocardia dioxanivorans CB1190 10364416 YP_004332637.1 CDS Psed_2581 NC_015312.1 2730529 2731671 D PFAM: Amidohydrolase 2; KEGG: rlt:Rleg2_6338 amidohydrolase 2; amidohydrolase 2730529..2731671 Pseudonocardia dioxanivorans CB1190 10364417 YP_004332638.1 CDS Psed_2582 NC_015312.1 2731664 2732059 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gym:GYMC10_1269 Rieske (2Fe-2S) iron-sulphur domain protein; Rieske (2Fe-2S) domain-containing protein 2731664..2732059 Pseudonocardia dioxanivorans CB1190 10364418 YP_004332639.1 CDS Psed_2583 NC_015312.1 2732075 2733625 D KEGG: msp:Mspyr1_07630 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2732075..2733625 Pseudonocardia dioxanivorans CB1190 10364419 YP_004332640.1 CDS Psed_2584 NC_015312.1 2733625 2734374 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tfu:Tfu_1298 2-deoxy-D-gluconate 3-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 2733625..2734374 Pseudonocardia dioxanivorans CB1190 10364420 YP_004332641.1 CDS Psed_2585 NC_015312.1 2734371 2735150 D PFAM: Amidohydrolase 2; KEGG: tfu:Tfu_1297 amidohydrolase protein; amidohydrolase 2734371..2735150 Pseudonocardia dioxanivorans CB1190 10364421 YP_004332642.1 CDS Psed_2586 NC_015312.1 2735168 2735929 D KEGG: aac:Aaci_2398 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2735168..2735929 Pseudonocardia dioxanivorans CB1190 10364422 YP_004332643.1 CDS Psed_2587 NC_015312.1 2735883 2737199 R PFAM: Major facilitator superfamily MFS-1; KEGG: rxy:Rxyl_2414 major facilitator transporter; major facilitator superfamily protein complement(2735883..2737199) Pseudonocardia dioxanivorans CB1190 10364423 YP_004332644.1 CDS Psed_2588 NC_015312.1 2737343 2738584 D PFAM: Cytochrome P450; KEGG: jan:Jann_2272 cytochrome P450-like; cytochrome P450 2737343..2738584 Pseudonocardia dioxanivorans CB1190 10364424 YP_004332645.1 CDS Psed_2589 NC_015312.1 2738644 2739873 D KEGG: fri:FraEuI1c_1873 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 2738644..2739873 Pseudonocardia dioxanivorans CB1190 10364425 YP_004332646.1 CDS Psed_2590 NC_015312.1 2739891 2740685 D KEGG: tfu:Tfu_1466 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2739891..2740685 Pseudonocardia dioxanivorans CB1190 10364426 YP_004332647.1 CDS Psed_2591 NC_015312.1 2740823 2741266 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cwo:Cwoe_1024 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2740823..2741266 Pseudonocardia dioxanivorans CB1190 10364427 YP_004332648.1 CDS Psed_2592 NC_015312.1 2741281 2741469 D KEGG: fal:FRAAL3396 hypothetical protein; hypothetical protein 2741281..2741469 Pseudonocardia dioxanivorans CB1190 10364428 YP_004332649.1 CDS Psed_2593 NC_015312.1 2741558 2743192 D PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: art:Arth_2287 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2741558..2743192 Pseudonocardia dioxanivorans CB1190 10364429 YP_004332650.1 CDS Psed_2594 NC_015312.1 2743239 2744240 R KEGG: ttr:Tter_2008 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; L-iditol 2-dehydrogenase complement(2743239..2744240) Pseudonocardia dioxanivorans CB1190 10364430 YP_004332651.1 CDS Psed_2595 NC_015312.1 2744243 2745046 R PFAM: Xylose isomerase, TIM barrel domain; KEGG: nar:Saro_3491 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein complement(2744243..2745046) Pseudonocardia dioxanivorans CB1190 10364431 YP_004332652.1 CDS Psed_2596 NC_015312.1 2745105 2746049 R TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: afw:Anae109_2380 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; 2-dehydropantoate 2-reductase complement(2745105..2746049) Pseudonocardia dioxanivorans CB1190 10364432 YP_004332653.1 CDS Psed_2597 NC_015312.1 2746216 2746971 D PFAM: Class II aldolase/adducin, N-terminal; KEGG: req:REQ_06410 aldolase; class II aldolase/adducin family protein 2746216..2746971 Pseudonocardia dioxanivorans CB1190 10364433 YP_004332654.1 CDS Psed_2598 NC_015312.1 2747068 2748291 D KEGG: rle:RL3578 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase 2747068..2748291 Pseudonocardia dioxanivorans CB1190 10364434 YP_004332655.1 CDS Psed_2599 NC_015312.1 2748399 2749607 D PFAM: Extracellular ligand-binding receptor; KEGG: reh:H16_A3293 ABC-type transporter, periplasmic component; ABC transporter substrate-binding protein 2748399..2749607 Pseudonocardia dioxanivorans CB1190 10364435 YP_004332656.1 CDS Psed_2600 NC_015312.1 2749672 2750535 D PFAM: ABC transporter permease; KEGG: sth:STH802 branched-chain amino acid ABC transporter permease; ABC transporter permease 2749672..2750535 Pseudonocardia dioxanivorans CB1190 10364436 YP_004332657.1 CDS Psed_2601 NC_015312.1 2750528 2751649 D PFAM: ABC transporter permease; KEGG: bxe:Bxe_A2754 branched chain amino acid ABC transporter inner membrane protein; ABC transporter permease 2750528..2751649 Pseudonocardia dioxanivorans CB1190 10364437 YP_004332658.1 CDS Psed_2602 NC_015312.1 2751649 2752479 D PFAM: ABC transporter-like; KEGG: tcu:Tcur_2856 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 2751649..2752479 Pseudonocardia dioxanivorans CB1190 10364438 YP_004332659.1 CDS Psed_2603 NC_015312.1 2752463 2753167 D PFAM: ABC transporter-like; KEGG: mil:ML5_3917 abc transporter related protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 2752463..2753167 Pseudonocardia dioxanivorans CB1190 10364439 YP_004332660.1 CDS Psed_2604 NC_015312.1 2753190 2753762 D hypothetical protein 2753190..2753762 Pseudonocardia dioxanivorans CB1190 10364440 YP_004332661.1 CDS Psed_2605 NC_015312.1 2753797 2754591 D KEGG: jan:Jann_2271 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2753797..2754591 Pseudonocardia dioxanivorans CB1190 10364441 YP_004332662.1 CDS Psed_2606 NC_015312.1 2754588 2755349 D KEGG: jan:Jann_2269 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2754588..2755349 Pseudonocardia dioxanivorans CB1190 10364442 YP_004332663.1 CDS Psed_2607 NC_015312.1 2755362 2755823 D KEGG: amd:AMED_7167 hypothetical protein; hypothetical protein 2755362..2755823 Pseudonocardia dioxanivorans CB1190 10364443 YP_004332664.1 CDS Psed_2608 NC_015312.1 2755820 2757280 D KEGG: nca:Noca_0203 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; succinate dehydrogenase 2755820..2757280 Pseudonocardia dioxanivorans CB1190 10364444 YP_004332665.1 CDS Psed_2609 NC_015312.1 2757277 2758182 D PFAM: Transcription regulator TrmB, N-terminal; KEGG: sro:Sros_2039 helix-turn-helix family DUF118; transcriptional regulator TrmB 2757277..2758182 Pseudonocardia dioxanivorans CB1190 10364445 YP_004332666.1 CDS Psed_2610 NC_015312.1 2758387 2759784 R PFAM: FAD dependent oxidoreductase; KEGG: gob:Gobs_3863 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2758387..2759784) Pseudonocardia dioxanivorans CB1190 10364446 YP_004332667.1 CDS Psed_2611 NC_015312.1 2759812 2762043 R KEGG: tcu:Tcur_2984 AAA ATPase; ATPase AAA complement(2759812..2762043) Pseudonocardia dioxanivorans CB1190 10364447 YP_004332668.1 CDS Psed_2612 NC_015312.1 2762067 2763755 D PFAM: Uncharacterised conserved protein UCP007542; KEGG: nml:Namu_4958 hypothetical protein; hypothetical protein 2762067..2763755 Pseudonocardia dioxanivorans CB1190 10364448 YP_004332669.1 CDS Psed_2613 NC_015312.1 2763763 2764596 R KEGG: amd:AMED_5870 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase; coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase complement(2763763..2764596) Pseudonocardia dioxanivorans CB1190 10364449 YP_004332670.1 CDS Psed_2614 NC_015312.1 2764758 2765246 D KEGG: fri:FraEuI1c_4693 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 2764758..2765246 Pseudonocardia dioxanivorans CB1190 10364450 YP_004332671.1 CDS Psed_2615 NC_015312.1 2765269 2765829 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sma:SAV_4701 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2765269..2765829) Pseudonocardia dioxanivorans CB1190 10364451 YP_004332672.1 CDS Psed_2616 NC_015312.1 2765956 2767602 D KEGG: sco:SCO3366 exporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 2765956..2767602 Pseudonocardia dioxanivorans CB1190 10364452 YP_004332673.1 CDS Psed_2617 NC_015312.1 2767665 2767880 R PFAM: Ferredoxin soy-like; KEGG: ami:Amir_1960 protein of unknown function DUF1271; hypothetical protein complement(2767665..2767880) Pseudonocardia dioxanivorans CB1190 10364453 YP_004332674.1 CDS Psed_2618 NC_015312.1 2767877 2769091 R KEGG: ami:Amir_1961 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase complement(2767877..2769091) Pseudonocardia dioxanivorans CB1190 10364454 YP_004332675.1 CDS Psed_2619 NC_015312.1 2769211 2770746 R KEGG: nfa:nfa30980 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(2769211..2770746) Pseudonocardia dioxanivorans CB1190 10364455 YP_004332676.1 CDS Psed_2620 NC_015312.1 2770808 2772130 R PFAM: Major facilitator superfamily MFS-1; KEGG: mno:Mnod_2777 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2770808..2772130) Pseudonocardia dioxanivorans CB1190 10364456 YP_004332677.1 CDS Psed_2621 NC_015312.1 2772127 2772846 R PFAM: Crotonase, core; KEGG: bxe:Bxe_B2809 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase complement(2772127..2772846) Pseudonocardia dioxanivorans CB1190 10364457 YP_004332678.1 CDS Psed_2622 NC_015312.1 2772853 2774160 R TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: bxe:Bxe_B2810 nitrilotriacetate monooxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase complement(2772853..2774160) Pseudonocardia dioxanivorans CB1190 10364458 YP_004332679.1 CDS Psed_2623 NC_015312.1 2774164 2775327 R PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_B2811 luciferase-like monooxygenase; luciferase-like protein complement(2774164..2775327) Pseudonocardia dioxanivorans CB1190 10364459 YP_004332680.1 CDS Psed_2624 NC_015312.1 2775324 2775998 R PFAM: cyclase; KEGG: fal:FRAAL6390 hypothetical protein; cyclase complement(2775324..2775998) Pseudonocardia dioxanivorans CB1190 10364460 YP_004332681.1 CDS Psed_2625 NC_015312.1 2775998 2776918 R PFAM: Dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B2813 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(2775998..2776918) Pseudonocardia dioxanivorans CB1190 10364461 YP_004332682.1 CDS Psed_2626 NC_015312.1 2777320 2777979 D KEGG: rha:RHA1_ro00274 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2777320..2777979 Pseudonocardia dioxanivorans CB1190 10364462 YP_004332683.1 CDS Psed_2627 NC_015312.1 2778079 2778576 D PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 2778079..2778576 Pseudonocardia dioxanivorans CB1190 10364463 YP_004332684.1 CDS Psed_2628 NC_015312.1 2778646 2779083 R PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_1481 anti-sigma-factor antagonist; sulfate transporter/antisigma-factor antagonist STAS complement(2778646..2779083) Pseudonocardia dioxanivorans CB1190 10364464 YP_004332685.1 CDS Psed_2629 NC_015312.1 2779325 2779783 R KEGG: mil:ML5_4830 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(2779325..2779783) Pseudonocardia dioxanivorans CB1190 10364465 YP_004332686.1 CDS Psed_2630 NC_015312.1 2779875 2781677 D PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: mil:ML5_4831 abc transporter related protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 2779875..2781677 Pseudonocardia dioxanivorans CB1190 10364466 YP_004332687.1 CDS Psed_2631 NC_015312.1 2781730 2782809 D KEGG: amd:AMED_4291 DNA topoisomerase IB; DNA topoisomerase IB 2781730..2782809 Pseudonocardia dioxanivorans CB1190 10364467 YP_004332688.1 CDS Psed_2632 NC_015312.1 2782912 2783463 R KEGG: nda:Ndas_2013 intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI; Pfpi family intracellular protease complement(2782912..2783463) Pseudonocardia dioxanivorans CB1190 10364468 YP_004332689.1 CDS Psed_2633 NC_015312.1 2783505 2784683 R TIGRFAM: Thiolase; KEGG: rha:RHA1_ro10318 acetyl-CoA C-acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase complement(2783505..2784683) Pseudonocardia dioxanivorans CB1190 10364469 YP_004332690.1 CDS Psed_2634 NC_015312.1 2784824 2786929 D SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Glycogen debranching enzyme; KEGG: ace:Acel_1372 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; glycogen debranching protein GlgX 2784824..2786929 Pseudonocardia dioxanivorans CB1190 10364470 YP_004332691.1 CDS Psed_2635 NC_015312.1 2787016 2787600 D KEGG: gob:Gobs_0834 phage SPO1 DNA polymerase-like protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; phage SPO1 DNA polymerase-like protein 2787016..2787600 Pseudonocardia dioxanivorans CB1190 10364471 YP_004332692.1 CDS Psed_2636 NC_015312.1 2787608 2787832 R hypothetical protein complement(2787608..2787832) Pseudonocardia dioxanivorans CB1190 10364472 YP_004332693.1 CDS Psed_2637 NC_015312.1 2787903 2790215 R PFAM: Serine/threonine-protein kinase-like domain; KEGG: sro:Sros_3960 serine/threonine protein kinase-like protein; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase complement(2787903..2790215) Pseudonocardia dioxanivorans CB1190 10364473 YP_004332694.1 CDS Psed_2638 NC_015312.1 2790384 2791217 D KEGG: ske:Sked_14980 hypothetical protein; TIGRFAM: Polyphosphate kinase 2, PA0141; PFAM: Polyphosphate kinase-2-related; polyphosphate kinase 2790384..2791217 Pseudonocardia dioxanivorans CB1190 10364474 YP_004332695.1 CDS Psed_2639 NC_015312.1 2791233 2792180 R PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: cwo:Cwoe_3024 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2791233..2792180) Pseudonocardia dioxanivorans CB1190 10364475 YP_004332696.1 CDS Psed_2640 NC_015312.1 2792509 2792811 D hypothetical protein 2792509..2792811 Pseudonocardia dioxanivorans CB1190 10364476 YP_004332697.1 CDS Psed_2641 NC_015312.1 2792867 2793736 D KEGG: nca:Noca_0239 ATPase; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 2792867..2793736 Pseudonocardia dioxanivorans CB1190 10364477 YP_004332698.1 CDS Psed_2642 NC_015312.1 2793738 2794862 D KEGG: nca:Noca_0238 VWA containing CoxE family protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A; von Willebrand factor A 2793738..2794862 Pseudonocardia dioxanivorans CB1190 10364478 YP_004332699.1 CDS Psed_2643 NC_015312.1 2794872 2795159 D hypothetical protein 2794872..2795159 Pseudonocardia dioxanivorans CB1190 10364479 YP_004332700.1 CDS Psed_2644 NC_015312.1 2795156 2795530 D KEGG: nca:Noca_0237 hypothetical protein; hypothetical protein 2795156..2795530 Pseudonocardia dioxanivorans CB1190 10364480 YP_004332701.1 CDS Psed_2645 NC_015312.1 2795666 2796616 D KEGG: rop:ROP_41430 hypothetical protein; hypothetical protein 2795666..2796616 Pseudonocardia dioxanivorans CB1190 10364481 YP_004332702.1 CDS Psed_2646 NC_015312.1 2796658 2796999 R KEGG: nca:Noca_0236 hypothetical protein; hypothetical protein complement(2796658..2796999) Pseudonocardia dioxanivorans CB1190 10364482 YP_004332703.1 CDS Psed_2647 NC_015312.1 2796996 2797295 R KEGG: nca:Noca_0235 hypothetical protein; hypothetical protein complement(2796996..2797295) Pseudonocardia dioxanivorans CB1190 10364483 YP_004332704.1 CDS Psed_2648 NC_015312.1 2797297 2797521 R KEGG: nca:Noca_0234 hypothetical protein; hypothetical protein complement(2797297..2797521) Pseudonocardia dioxanivorans CB1190 10364484 YP_004332705.1 CDS Psed_2649 NC_015312.1 2797543 2797770 R hypothetical protein complement(2797543..2797770) Pseudonocardia dioxanivorans CB1190 10364485 YP_004332706.1 CDS Psed_2650 NC_015312.1 2797770 2798042 R KEGG: nca:Noca_0233 hypothetical protein; hypothetical protein complement(2797770..2798042) Pseudonocardia dioxanivorans CB1190 10364486 YP_004332707.1 CDS Psed_2651 NC_015312.1 2798056 2798637 R PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: nca:Noca_0232 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G complement(2798056..2798637) Pseudonocardia dioxanivorans CB1190 10364487 YP_004332708.1 CDS Psed_2652 NC_015312.1 2798641 2801052 R TIGRFAM: Carbon-monoxide dehydrogenase, large subunit; KEGG: nca:Noca_0230 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase large subunit complement(2798641..2801052) Pseudonocardia dioxanivorans CB1190 10364488 YP_004332709.1 CDS Psed_2653 NC_015312.1 2801049 2801564 R KEGG: nca:Noca_0229 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(2801049..2801564) Pseudonocardia dioxanivorans CB1190 10364489 YP_004332710.1 CDS Psed_2654 NC_015312.1 2801576 2802451 R KEGG: nca:Noca_0228 molybdopterin dehydrogenase, FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase complement(2801576..2802451) Pseudonocardia dioxanivorans CB1190 10364490 YP_004332711.1 CDS Psed_2655 NC_015312.1 2802451 2802729 R KEGG: nca:Noca_0227 hypothetical protein; hypothetical protein complement(2802451..2802729) Pseudonocardia dioxanivorans CB1190 10364491 YP_004332712.1 CDS Psed_2656 NC_015312.1 2802915 2803811 D KEGG: nml:Namu_5284 molybdopterin dehydrogenase FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 2802915..2803811 Pseudonocardia dioxanivorans CB1190 10364492 YP_004332713.1 CDS Psed_2657 NC_015312.1 2803820 2804287 D KEGG: mkm:Mkms_0501 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 2803820..2804287 Pseudonocardia dioxanivorans CB1190 10364493 YP_004332714.1 CDS Psed_2658 NC_015312.1 2804284 2806692 D TIGRFAM: Carbon-monoxide dehydrogenase, large subunit; KEGG: nml:Namu_5287 carbon-monoxide dehydrogenase large subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase large subunit 2804284..2806692 Pseudonocardia dioxanivorans CB1190 10364494 YP_004332715.1 CDS Psed_2659 NC_015312.1 2806701 2807618 D PFAM: XdhC- CoxI; YHS; KEGG: art:Arth_2038 hypothetical protein; XshC-Cox1-family protein 2806701..2807618 Pseudonocardia dioxanivorans CB1190 10364495 YP_004332716.1 CDS Psed_2660 NC_015312.1 2807637 2808365 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0256 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2807637..2808365) Pseudonocardia dioxanivorans CB1190 10364496 YP_004332717.1 CDS Psed_2661 NC_015312.1 2808409 2810007 R KEGG: tcu:Tcur_1972 EmrB/QacA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter complement(2808409..2810007) Pseudonocardia dioxanivorans CB1190 10364497 YP_004332718.1 CDS Psed_2662 NC_015312.1 2810095 2811684 R PFAM: Major facilitator superfamily MFS-1; KEGG: nml:Namu_4792 major facilitator superfamily protein; major facilitator superfamily protein complement(2810095..2811684) Pseudonocardia dioxanivorans CB1190 10364498 YP_004332719.1 CDS Psed_2663 NC_015312.1 2811787 2812500 R KEGG: fri:FraEuI1c_2609 peptidase M24; peptidase M24 complement(2811787..2812500) Pseudonocardia dioxanivorans CB1190 10364499 YP_004332720.1 CDS Psed_2664 NC_015312.1 2812536 2813225 R KEGG: sen:SACE_2965 haloacid dehalogenase-like hydrolase; haloacid dehalogenase complement(2812536..2813225) Pseudonocardia dioxanivorans CB1190 10364500 YP_004332721.1 CDS Psed_2666 NC_015312.1 2813923 2815173 R KEGG: aoe:Clos_0876 formyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase complement(2813923..2815173) Pseudonocardia dioxanivorans CB1190 10364502 YP_004332722.1 CDS Psed_2667 NC_015312.1 2815291 2817351 D KEGG: rer:RER_34970 CdaR family transcriptional regulator; PFAM: GAF; SMART: GAF; GAF domain-containing protein 2815291..2817351 Pseudonocardia dioxanivorans CB1190 10364503 YP_004332723.1 CDS Psed_2668 NC_015312.1 2817580 2817831 D hypothetical protein 2817580..2817831 Pseudonocardia dioxanivorans CB1190 10364504 YP_004332724.1 CDS Psed_2669 NC_015312.1 2817860 2819896 D KEGG: sti:Sthe_2892 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 2817860..2819896 Pseudonocardia dioxanivorans CB1190 10364505 YP_004332725.1 CDS Psed_2670 NC_015312.1 2819908 2821875 D KEGG: sti:Sthe_3498 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 2819908..2821875 Pseudonocardia dioxanivorans CB1190 10364506 YP_004332726.1 CDS Psed_2671 NC_015312.1 2822049 2822831 R KEGG: bxe:Bxe_C0850 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(2822049..2822831) Pseudonocardia dioxanivorans CB1190 10364507 YP_004332727.1 CDS Psed_2672 NC_015312.1 2822995 2824512 D KEGG: amd:AMED_7123 fatty-acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 2822995..2824512 Pseudonocardia dioxanivorans CB1190 10364508 YP_004332728.1 CDS Psed_2673 NC_015312.1 2824493 2825188 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_7223 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2824493..2825188) Pseudonocardia dioxanivorans CB1190 10364509 YP_004332729.1 CDS Psed_2674 NC_015312.1 2825383 2826132 D KEGG: sta:STHERM_c04220 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2825383..2826132 Pseudonocardia dioxanivorans CB1190 10364510 YP_004332730.1 CDS Psed_2675 NC_015312.1 2826141 2826890 D KEGG: fri:FraEuI1c_5330 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2826141..2826890 Pseudonocardia dioxanivorans CB1190 10364511 YP_004332731.1 CDS Psed_2676 NC_015312.1 2826906 2827739 D PFAM: Crotonase, core; KEGG: axy:AXYL_00935 3-hydroxybutyryl-CoA dehydratase 1; enoyl-CoA hydratase 2826906..2827739 Pseudonocardia dioxanivorans CB1190 10364512 YP_004332732.1 CDS Psed_2677 NC_015312.1 2827838 2829808 D KEGG: rop:ROP_25260 flavin-containing monooxygenase; 4-hydroxyacetophenone monooxygenase 2827838..2829808 Pseudonocardia dioxanivorans CB1190 10364513 YP_004332733.1 CDS Psed_2678 NC_015312.1 2829962 2830543 D PFAM: Domain of unknown function DUF151; KEGG: gob:Gobs_2724 hypothetical protein; hypothetical protein 2829962..2830543 Pseudonocardia dioxanivorans CB1190 10364514 YP_004332734.1 CDS Psed_2679 NC_015312.1 2830540 2831907 R KEGG: amd:AMED_5223 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase (ubiquinone) complement(2830540..2831907) Pseudonocardia dioxanivorans CB1190 10364515 YP_004332735.1 CDS Psed_2680 NC_015312.1 2832116 2833537 R KEGG: ske:Sked_35010 selenocysteine lyase; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase complement(2832116..2833537) Pseudonocardia dioxanivorans CB1190 10364516 YP_004332736.1 CDS Psed_2681 NC_015312.1 2833769 2834932 R KEGG: fal:FRAAL4450 monomeric sarcosine oxidase (MSOX); PFAM: FAD dependent oxidoreductase; sarcosine oxidase complement(2833769..2834932) Pseudonocardia dioxanivorans CB1190 10364517 YP_004332737.1 CDS Psed_2682 NC_015312.1 2835039 2836154 D PFAM: Alpha/beta hydrolase fold-1; KEGG: req:REQ_02210 alpha/beta hydrolase; alpha/beta hydrolase 2835039..2836154 Pseudonocardia dioxanivorans CB1190 10364518 YP_004332738.1 CDS Psed_2683 NC_015312.1 2836331 2837281 D PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: sen:SACE_3449 gluconolactonase precursor; SMP-30/Gluconolaconase/LRE-like region-containing protein 2836331..2837281 Pseudonocardia dioxanivorans CB1190 10364519 YP_004332739.1 CDS Psed_2684 NC_015312.1 2837374 2838132 D KEGG: cag:Cagg_2751 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2837374..2838132 Pseudonocardia dioxanivorans CB1190 10364520 YP_004332740.1 CDS Psed_2685 NC_015312.1 2838290 2839903 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_6256 extracellular solute-binding protein; ABC transporter substrate-binding protein 2838290..2839903 Pseudonocardia dioxanivorans CB1190 10364521 YP_004332741.1 CDS Psed_2686 NC_015312.1 2839900 2840820 D PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: sen:SACE_3449 gluconolactonase precursor; SMP-30/Gluconolaconase/LRE-like region-containing protein 2839900..2840820 Pseudonocardia dioxanivorans CB1190 10364522 YP_004332742.1 CDS Psed_2688 NC_015312.1 2842197 2843396 D PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_0863 major facilitator transporter; major facilitator superfamily protein 2842197..2843396 Pseudonocardia dioxanivorans CB1190 10364524 YP_004332743.1 CDS Psed_2689 NC_015312.1 2843440 2844450 R TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG2256, predicted; KEGG: fal:FRAAL4774 N5,N10-methylenetetrahydromethanopterin reductase-related protein; F420-dependent oxidoreductase complement(2843440..2844450) Pseudonocardia dioxanivorans CB1190 10364525 YP_004332744.1 CDS Psed_2690 NC_015312.1 2844666 2845448 D PFAM: DSBA-like thioredoxin domain; KEGG: svi:Svir_07810 protein-disulfide isomerase; DSBA oxidoreductase 2844666..2845448 Pseudonocardia dioxanivorans CB1190 10364526 YP_004332745.1 CDS Psed_2691 NC_015312.1 2845513 2846808 D PFAM: Cytochrome P450; KEGG: amd:AMED_3426 cytochrome P450; cytochrome P450 2845513..2846808 Pseudonocardia dioxanivorans CB1190 10364527 YP_004332746.1 CDS Psed_2692 NC_015312.1 2846772 2847824 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kfl:Kfla_5208 endonuclease/exonuclease/phosphatase; hypothetical protein complement(2846772..2847824) Pseudonocardia dioxanivorans CB1190 10364528 YP_004332747.1 CDS Psed_2693 NC_015312.1 2847974 2848630 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: msp:Mspyr1_02660 dinucleotide-binding enzyme; coenzyme F420-dependent NADP oxidoreductase complement(2847974..2848630) Pseudonocardia dioxanivorans CB1190 10364529 YP_004332748.1 CDS Psed_2694 NC_015312.1 2848752 2849207 R PFAM: Protein of unknown function DUF1348; KEGG: amd:AMED_1643 hypothetical protein; hypothetical protein complement(2848752..2849207) Pseudonocardia dioxanivorans CB1190 10364530 YP_004332749.1 CDS Psed_2695 NC_015312.1 2849303 2849875 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sma:SAV_7471 TetR family transcriptional regulator; TetR family transcriptional regulator 2849303..2849875 Pseudonocardia dioxanivorans CB1190 10364531 YP_004332750.1 CDS Psed_2696 NC_015312.1 2849961 2851286 R TIGRFAM: Phenylacetate-CoA ligase; KEGG: gob:Gobs_1908 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; phenylacetate-CoA ligase complement(2849961..2851286) Pseudonocardia dioxanivorans CB1190 10364532 YP_004332751.1 CDS Psed_2697 NC_015312.1 2851283 2853340 R TIGRFAM: Phenylacetic acid degradation protein PaaN; KEGG: amd:AMED_1563 phenylacetic acid degradation protein PaaZ; PFAM: MaoC-like dehydratase; Aldehyde dehydrogenase domain; phenylacetic acid degradation protein paaN complement(2851283..2853340) Pseudonocardia dioxanivorans CB1190 10364533 YP_004332752.1 CDS Psed_2698 NC_015312.1 2853523 2854317 D PFAM: Crotonase, core; KEGG: sgr:SGR_2381 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 2853523..2854317 Pseudonocardia dioxanivorans CB1190 10364534 YP_004332753.1 CDS Psed_2699 NC_015312.1 2854314 2854937 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: scb:SCAB_45331 transcriptional regulator; TetR family transcriptional regulator 2854314..2854937 Pseudonocardia dioxanivorans CB1190 10364535 YP_004332754.1 CDS Psed_2700 NC_015312.1 2855071 2856030 D KEGG: sen:SACE_3544 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: Phenylacetate-CoA oxygenase, PaaG subunit; PFAM: Phenylacetic acid catabolic; phenylacetate-CoA oxygenase subunit PaaG 2855071..2856030 Pseudonocardia dioxanivorans CB1190 10364536 YP_004332755.1 CDS Psed_2701 NC_015312.1 2856027 2856374 D KEGG: sen:SACE_3545 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: Phenylacetic acid degradation B; PFAM: Phenylacetic acid degradation B; phenylacetate-CoA oxygenase subunit PaaH 2856027..2856374 Pseudonocardia dioxanivorans CB1190 10364537 YP_004332756.1 CDS Psed_2702 NC_015312.1 2856409 2857323 D KEGG: sen:SACE_3546 phenylacetic acid degradation protein; TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit; PFAM: Phenylacetic acid catabolic; phenylacetate-CoA oxygenase subunit PaaI 2856409..2857323 Pseudonocardia dioxanivorans CB1190 10364538 YP_004332757.1 CDS Psed_2703 NC_015312.1 2857317 2857826 D KEGG: sen:SACE_3547 phenylacetic acid degradation protein; TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: Domain of unknown function DUF59; phenylacetate-CoA oxygenase subunit PaaJ 2857317..2857826 Pseudonocardia dioxanivorans CB1190 10364539 YP_004332758.1 CDS Psed_2704 NC_015312.1 2857829 2858923 D TIGRFAM: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: sen:SACE_3548 phenylacetic acid degradation NADH oxidoreductase; PFAM: Ferredoxin; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; phenylacetate-CoA oxygenase/reductase subunit PaaK 2857829..2858923 Pseudonocardia dioxanivorans CB1190 10364540 YP_004332759.1 CDS Psed_2705 NC_015312.1 2859076 2859798 D KEGG: hmg:100208015 hypothetical protein LOC100208015; hypothetical protein 2859076..2859798 Pseudonocardia dioxanivorans CB1190 10364541 YP_004332760.1 CDS Psed_2706 NC_015312.1 2860052 2861206 D PFAM: Major facilitator superfamily MFS-1; KEGG: gob:Gobs_0263 major facilitator superfamily protein; major facilitator superfamily protein 2860052..2861206 Pseudonocardia dioxanivorans CB1190 10364542 YP_004332761.1 CDS Psed_2707 NC_015312.1 2861322 2862221 D PFAM: Aldose 1-epimerase; KEGG: sen:SACE_0644 aldose-1-epimerase; aldose-1-epimerase 2861322..2862221 Pseudonocardia dioxanivorans CB1190 10364543 YP_004332762.1 CDS Psed_2708 NC_015312.1 2862297 2863082 D TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase; KEGG: fra:Francci3_2657 precorrin 6A synthase; PFAM: Tetrapyrrole methylase; precorrin-6A synthase 2862297..2863082 Pseudonocardia dioxanivorans CB1190 10364544 YP_004332763.1 CDS Psed_2709 NC_015312.1 2863188 2864438 D KEGG: amd:AMED_6303 metal ion transporter, Nramp family; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter 2863188..2864438 Pseudonocardia dioxanivorans CB1190 10364545 YP_004332764.1 CDS Psed_2710 NC_015312.1 2864642 2865112 D PFAM: ATPase-like, ATP-binding domain; KEGG: ami:Amir_5361 anti-sigma regulatory factor, serine/threonine protein kinase; ATP-binding protein 2864642..2865112 Pseudonocardia dioxanivorans CB1190 10364546 YP_004332765.1 CDS Psed_2711 NC_015312.1 2865088 2865723 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_7022 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2865088..2865723) Pseudonocardia dioxanivorans CB1190 10364547 YP_004332766.1 CDS Psed_2712 NC_015312.1 2866249 2866890 D KEGG: rop:ROP_18570 hypothetical protein; hypothetical protein 2866249..2866890 Pseudonocardia dioxanivorans CB1190 10364548 YP_004332767.1 CDS Psed_2713 NC_015312.1 2866929 2867369 D PFAM: Ferric-uptake regulator; KEGG: mil:ML5_4698 ferric uptake regulator, fur family; Fur family ferric uptake regulator 2866929..2867369 Pseudonocardia dioxanivorans CB1190 10364549 YP_004332768.1 CDS Psed_2714 NC_015312.1 2867366 2869693 D PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: amd:AMED_4105 catalase/peroxidase; catalase-peroxidase 2867366..2869693 Pseudonocardia dioxanivorans CB1190 10364550 YP_004332769.1 CDS Psed_2715 NC_015312.1 2869770 2870180 R PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: amd:AMED_0264 sporulation and cell division protein SsgA; sporulation and cell division protein SsgA complement(2869770..2870180) Pseudonocardia dioxanivorans CB1190 10364551 YP_004332770.1 CDS Psed_2716 NC_015312.1 2870324 2870851 R KEGG: ami:Amir_4443 acyl transferase; acyl transferase complement(2870324..2870851) Pseudonocardia dioxanivorans CB1190 10364552 YP_004332771.1 CDS Psed_2717 NC_015312.1 2871122 2872804 D KEGG: sen:SACE_3902 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; butyrate--CoA ligase 2871122..2872804 Pseudonocardia dioxanivorans CB1190 10364553 YP_004332772.1 CDS Psed_2718 NC_015312.1 2872868 2873317 R PFAM: Protein of unknown function DUF1707; KEGG: nfa:nfa41690 hypothetical protein; hypothetical protein complement(2872868..2873317) Pseudonocardia dioxanivorans CB1190 10364554 YP_004332773.1 CDS Psed_2719 NC_015312.1 2873415 2874050 R KEGG: kfl:Kfla_0937 flavin reductase domain protein FMN-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein complement(2873415..2874050) Pseudonocardia dioxanivorans CB1190 10364555 YP_004332774.1 CDS Psed_2720 NC_015312.1 2874112 2875101 D TIGRFAM: Cobalamin biosynthesis CobD/CbiB; HAMAP: Cobalamin biosynthesis CobD/CbiB; KEGG: nml:Namu_0174 cobalamin biosynthesis protein CobD; PFAM: Cobalamin biosynthesis CobD/CbiB; cobalamin biosynthesis protein CbiB 2874112..2875101 Pseudonocardia dioxanivorans CB1190 10364556 YP_004332775.1 CDS Psed_2721 NC_015312.1 2875112 2876092 R KEGG: sen:SACE_1577 hypothetical protein; hypothetical protein complement(2875112..2876092) Pseudonocardia dioxanivorans CB1190 10364557 YP_004332776.1 CDS Psed_2722 NC_015312.1 2876136 2877722 D TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: ami:Amir_5883 cobyric acid synthase CobQ; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase; cobyric acid synthase 2876136..2877722 Pseudonocardia dioxanivorans CB1190 10364558 YP_004332777.1 CDS Psed_2723 NC_015312.1 2877719 2879986 D PFAM: von Willebrand factor, type A; ATPase, AAA-5; KEGG: sen:SACE_5965 magnesium-chelatase subunit; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core; magnesium chelatase 2877719..2879986 Pseudonocardia dioxanivorans CB1190 10364559 YP_004332778.1 CDS Psed_2724 NC_015312.1 2880010 2880624 D TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: amd:AMED_7053 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase 2880010..2880624 Pseudonocardia dioxanivorans CB1190 10364560 YP_004332779.1 CDS Psed_2725 NC_015312.1 2880632 2881969 D TIGRFAM: Cobyrinic acid a,c-diamide synthase CbiA; HAMAP: Cobyrinic acid a,c-diamide synthase CbiA; KEGG: ami:Amir_5859 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase; cobyrinic acid A,C-diamide synthase 2880632..2881969 Pseudonocardia dioxanivorans CB1190 10364561 YP_004332780.1 CDS Psed_2726 NC_015312.1 2881969 2882358 D PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; KEGG: tcu:Tcur_1317 precorrin-3B C17-methyltransferase; cobalamin (vitamin B12) biosynthesis protein CbiG 2881969..2882358 Pseudonocardia dioxanivorans CB1190 10364562 YP_004332781.1 CDS Psed_2727 NC_015312.1 2882664 2883875 D KEGG: nfa:nfa40770 uroporphyrinogen III methylase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; PFAM: Tetrapyrrole methylase; uroporphyrin-III C-methyltransferase 2882664..2883875 Pseudonocardia dioxanivorans CB1190 10364563 YP_004332782.1 CDS Psed_2729 NC_015312.1 2884665 2885141 D hypothetical protein 2884665..2885141 Pseudonocardia dioxanivorans CB1190 10364565 YP_004332783.1 CDS Psed_2730 NC_015312.1 2885138 2886883 D TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic; Cob(II)yrinic acid a,c-diamide reductase; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic; KEGG: sma:SAV_6795 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like; Nitroreductase-like; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2885138..2886883 Pseudonocardia dioxanivorans CB1190 10364566 YP_004332784.1 CDS Psed_2731 NC_015312.1 2886996 2888321 R HAMAP: DNA polymerase IV; KEGG: sen:SACE_6234 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV complement(2886996..2888321) Pseudonocardia dioxanivorans CB1190 10364567 YP_004332785.1 CDS Psed_2732 NC_015312.1 2888403 2888960 R PFAM: DSBA-like thioredoxin domain; KEGG: nml:Namu_0894 DsbA oxidoreductase; DSBA oxidoreductase complement(2888403..2888960) Pseudonocardia dioxanivorans CB1190 10364568 YP_004332786.1 CDS Psed_2733 NC_015312.1 2888994 2890334 D TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: gob:Gobs_1802 cyclic nucleotide-binding protein; PFAM: Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter NhaA 2888994..2890334 Pseudonocardia dioxanivorans CB1190 10364569 YP_004332787.1 CDS Psed_2734 NC_015312.1 2890510 2891748 D KEGG: mpt:Mpe_A2676 acetyl-coenzyme A dehydrogenase, medium chain; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; butyryl-CoA dehydrogenase 2890510..2891748 Pseudonocardia dioxanivorans CB1190 10364570 YP_004332788.1 CDS Psed_2735 NC_015312.1 2891848 2892450 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_1946 TetR family transcriptional regulator; TetR family transcriptional regulator 2891848..2892450 Pseudonocardia dioxanivorans CB1190 10364571 YP_004332789.1 CDS Psed_2736 NC_015312.1 2892447 2893127 D KEGG: amd:AMED_1945 hypothetical protein; hypothetical protein 2892447..2893127 Pseudonocardia dioxanivorans CB1190 10364572 YP_004332790.1 CDS Psed_2737 NC_015312.1 2893120 2894484 D KEGG: amd:AMED_1944 FAD-dependent oxidoreductase; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase 2893120..2894484 Pseudonocardia dioxanivorans CB1190 10364573 YP_004332791.1 CDS Psed_2738 NC_015312.1 2894509 2895258 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: kfl:Kfla_4144 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase complement(2894509..2895258) Pseudonocardia dioxanivorans CB1190 10364574 YP_004332792.1 CDS Psed_2739 NC_015312.1 2895847 2897028 D PFAM: FAD dependent oxidoreductase; KEGG: azl:AZL_c00540 FAD-dependent oxidoreductase; FAD dependent oxidoreductase 2895847..2897028 Pseudonocardia dioxanivorans CB1190 10364575 YP_004332793.1 CDS Psed_2740 NC_015312.1 2897076 2898338 D KEGG: gob:Gobs_4206 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 2897076..2898338 Pseudonocardia dioxanivorans CB1190 10364576 YP_004332794.1 CDS Psed_2741 NC_015312.1 2898292 2898918 R SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: rer:RER_52840 3-oxoadipate CoA-transferase beta subunit; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(2898292..2898918) Pseudonocardia dioxanivorans CB1190 10364577 YP_004332795.1 CDS Psed_2742 NC_015312.1 2898918 2899688 R SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: req:REQ_33550 3-oxoadipate CoA-transferase ScoA; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(2898918..2899688) Pseudonocardia dioxanivorans CB1190 10364578 YP_004332796.1 CDS Psed_2743 NC_015312.1 2899792 2900463 R PFAM: Haloacid dehalogenase-like hydrolase; KEGG: cmi:CMM_2866 hydrolase; haloacid dehalogenase complement(2899792..2900463) Pseudonocardia dioxanivorans CB1190 10364579 YP_004332797.1 CDS Psed_2744 NC_015312.1 2900506 2901288 R KEGG: fri:FraEuI1c_1424 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(2900506..2901288) Pseudonocardia dioxanivorans CB1190 10364580 YP_004332798.1 CDS Psed_2745 NC_015312.1 2901419 2901793 D KEGG: fri:FraEuI1c_1425 hypothetical protein; hypothetical protein 2901419..2901793 Pseudonocardia dioxanivorans CB1190 10364581 YP_004332799.1 CDS Psed_2746 NC_015312.1 2901855 2902997 D KEGG: rer:RER_52880 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: Lyase 1, N-terminal; 3-carboxy-cis,cis-muconate cycloisomerase 2901855..2902997 Pseudonocardia dioxanivorans CB1190 10364582 YP_004332800.1 CDS Psed_2747 NC_015312.1 2902994 2903773 D TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: req:REQ_33600 IclR family transcriptional regulator; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 2902994..2903773 Pseudonocardia dioxanivorans CB1190 10364583 YP_004332801.1 CDS Psed_2748 NC_015312.1 2903830 2904894 D KEGG: cwo:Cwoe_0286 hypothetical protein; hypothetical protein 2903830..2904894 Pseudonocardia dioxanivorans CB1190 10364584 YP_004332802.1 CDS Psed_2749 NC_015312.1 2905045 2905272 R hypothetical protein complement(2905045..2905272) Pseudonocardia dioxanivorans CB1190 10364585 YP_004332803.1 CDS Psed_2750 NC_015312.1 2905357 2906346 D KEGG: sen:SACE_4209 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 2905357..2906346 Pseudonocardia dioxanivorans CB1190 10364586 YP_004332804.1 CDS Psed_2751 NC_015312.1 2906454 2907824 D KEGG: mrb:Mrub_3035 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; ferredoxin-NADP reductase 2906454..2907824 Pseudonocardia dioxanivorans CB1190 10364587 YP_004332805.1 CDS Psed_2752 NC_015312.1 2908010 2908282 R hypothetical protein complement(2908010..2908282) Pseudonocardia dioxanivorans CB1190 10364588 YP_004332806.1 CDS Psed_2753 NC_015312.1 2908634 2909419 D KEGG: amd:AMED_3870 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 2908634..2909419 Pseudonocardia dioxanivorans CB1190 10364589 YP_004332807.1 CDS Psed_2754 NC_015312.1 2909544 2911229 R PFAM: Cytochrome b/b6, N-terminal; KEGG: ami:Amir_1376 cytochrome b/b6 domain protein; cytochrome b/b6 domain-containing protein complement(2909544..2911229) Pseudonocardia dioxanivorans CB1190 10364590 YP_004332808.1 CDS Psed_2755 NC_015312.1 2911226 2912362 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: sen:SACE_1686 ubiquinol-cytochrome c reductase iron-sulfur subunit; Rieske (2Fe-2S) domain-containing protein complement(2911226..2912362) Pseudonocardia dioxanivorans CB1190 10364591 YP_004332809.1 CDS Psed_2756 NC_015312.1 2912359 2913219 R PFAM: Cytochrome c, class I; KEGG: amd:AMED_2201 ubiquinol-cytochrome c reductase cytochrome c subunit; cytochrome c class I complement(2912359..2913219) Pseudonocardia dioxanivorans CB1190 10364592 YP_004332810.1 CDS Psed_2757 NC_015312.1 2913272 2913874 R KEGG: mjl:Mjls_3302 cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III; cytochrome-c oxidase complement(2913272..2913874) Pseudonocardia dioxanivorans CB1190 10364593 YP_004332811.1 CDS Psed_2758 NC_015312.1 2913983 2914531 D KEGG: ami:Amir_1371 response regulator receiver protein; hypothetical protein 2913983..2914531 Pseudonocardia dioxanivorans CB1190 10364594 YP_004332812.1 CDS Psed_2759 NC_015312.1 2914524 2915636 D PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: sen:SACE_1681 anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 2914524..2915636 Pseudonocardia dioxanivorans CB1190 10364595 YP_004332813.1 CDS Psed_2760 NC_015312.1 2915690 2915968 R PFAM: Transcription regulator AsnC-type, C-terminal; KEGG: svi:Svir_10710 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2915690..2915968) Pseudonocardia dioxanivorans CB1190 10364596 YP_004332814.1 CDS Psed_2761 NC_015312.1 2916026 2917786 R SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: sen:SACE_1689 hypothetical protein; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon complement(2916026..2917786) Pseudonocardia dioxanivorans CB1190 10364597 YP_004332815.1 CDS Psed_2762 NC_015312.1 2918169 2919566 D PFAM: Protein of unknown function DUF901; KEGG: ami:Amir_1379 protein of unknown function DUF901; hypothetical protein 2918169..2919566 Pseudonocardia dioxanivorans CB1190 10364598 YP_004332816.1 CDS Psed_2763 NC_015312.1 2919674 2919931 D KEGG: fri:FraEuI1c_1805 hypothetical protein; hypothetical protein 2919674..2919931 Pseudonocardia dioxanivorans CB1190 10364599 YP_004332817.1 CDS Psed_2764 NC_015312.1 2920226 2921320 D PFAM: NLP/P60; KEGG: amd:AMED_5872 NLP/P60-family protein; NLP/P60 protein 2920226..2921320 Pseudonocardia dioxanivorans CB1190 10364600 YP_004332818.1 CDS Psed_2765 NC_015312.1 2921475 2922638 D PFAM: Glycosyl transferase, group 1; KEGG: req:REQ_28150 glycosyl transferase 1; group 1 glycosyl transferase 2921475..2922638 Pseudonocardia dioxanivorans CB1190 10364601 YP_004332819.1 CDS Psed_2766 NC_015312.1 2922680 2924491 R KEGG: sen:SACE_1694 long-chain fatty acid ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(2922680..2924491) Pseudonocardia dioxanivorans CB1190 10364602 YP_004332820.1 CDS Psed_2767 NC_015312.1 2924624 2925205 D KEGG: amd:AMED_2446 hypothetical protein; hypothetical protein 2924624..2925205 Pseudonocardia dioxanivorans CB1190 10364603 YP_004332821.1 CDS Psed_2768 NC_015312.1 2925260 2926048 D PFAM: Metallo-dependent phosphatase; KEGG: amd:AMED_2447 metallophosphoesterase; metallophosphoesterase 2925260..2926048 Pseudonocardia dioxanivorans CB1190 10364604 YP_004332822.1 CDS Psed_2769 NC_015312.1 2926086 2926520 D PFAM: Streptomyces cyclase/dehydrase; KEGG: amd:AMED_2448 cyclase/dehydrase; cyclase 2926086..2926520 Pseudonocardia dioxanivorans CB1190 10364605 YP_004332823.1 CDS Psed_2770 NC_015312.1 2926540 2927814 D KEGG: sen:SACE_1698 arsenite-transporting ATPase; arsenite-transporting ATPase 2926540..2927814 Pseudonocardia dioxanivorans CB1190 10364606 YP_004332824.1 CDS Psed_2771 NC_015312.1 2927811 2928230 D KEGG: ami:Amir_1388 hypothetical protein; hypothetical protein 2927811..2928230 Pseudonocardia dioxanivorans CB1190 10364607 YP_004332825.1 CDS Psed_2772 NC_015312.1 2928227 2929225 D KEGG: ami:Amir_1389 ROK family protein; PFAM: ROK; glucokinase 2928227..2929225 Pseudonocardia dioxanivorans CB1190 10364608 YP_004332826.1 CDS Psed_2773 NC_015312.1 2929281 2929814 R KEGG: sen:SACE_1701 hypothetical protein; hypothetical protein complement(2929281..2929814) Pseudonocardia dioxanivorans CB1190 10364609 YP_004332827.1 CDS Psed_2774 NC_015312.1 2930054 2930770 D KEGG: sen:SACE_1702 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2930054..2930770 Pseudonocardia dioxanivorans CB1190 10364610 YP_004332828.1 CDS Psed_2775 NC_015312.1 2930784 2931806 D KEGG: rpe:RPE_3904 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 2930784..2931806 Pseudonocardia dioxanivorans CB1190 10364611 YP_004332829.1 CDS Psed_2776 NC_015312.1 2932071 2932559 D KEGG: svi:Svir_24810 hypothetical protein; hypothetical protein 2932071..2932559 Pseudonocardia dioxanivorans CB1190 10364612 YP_004332830.1 CDS Psed_2777 NC_015312.1 2932618 2932776 R KEGG: gob:Gobs_4779 hypothetical protein; hypothetical protein complement(2932618..2932776) Pseudonocardia dioxanivorans CB1190 10364613 YP_004332831.1 CDS Psed_2778 NC_015312.1 2932925 2934313 D TIGRFAM: DAHP synthetase, class II; KEGG: ami:Amir_1395 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; phospho-2-dehydro-3-deoxyheptonate aldolase 2932925..2934313 Pseudonocardia dioxanivorans CB1190 10364614 YP_004332832.1 CDS Psed_2779 NC_015312.1 2934345 2936102 R PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: nml:Namu_3222 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; PASTA; serine/threonine protein kinase with PASTA sensor(s) complement(2934345..2936102) Pseudonocardia dioxanivorans CB1190 10364615 YP_004332833.1 CDS Psed_2780 NC_015312.1 2936245 2936610 D KEGG: sen:SACE_1711 transcriptional regulatory protein; transcriptional regulatory protein 2936245..2936610 Pseudonocardia dioxanivorans CB1190 10364616 YP_004332834.1 CDS Psed_2781 NC_015312.1 2936579 2937589 R KEGG: ami:Amir_3811 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; phytoene synthase complement(2936579..2937589) Pseudonocardia dioxanivorans CB1190 10364617 YP_004332835.1 CDS Psed_2782 NC_015312.1 2937567 2939324 R KEGG: ami:Amir_1398 hypothetical protein; hypothetical protein complement(2937567..2939324) Pseudonocardia dioxanivorans CB1190 10364618 YP_004332836.1 CDS Psed_2783 NC_015312.1 2939341 2940939 R KEGG: sen:SACE_1713 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase; phytoene desaturase complement(2939341..2940939) Pseudonocardia dioxanivorans CB1190 10364619 YP_004332837.1 CDS Psed_2784 NC_015312.1 2940936 2942147 R KEGG: svi:Svir_27930 geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Geranyltranstransferase complement(2940936..2942147) Pseudonocardia dioxanivorans CB1190 10364620 YP_004332838.1 CDS Psed_2785 NC_015312.1 2942303 2943205 D TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: sen:SACE_1715 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2942303..2943205 Pseudonocardia dioxanivorans CB1190 10364621 YP_004332839.1 CDS Psed_2786 NC_015312.1 2943301 2943993 R KEGG: ami:Amir_1403 hypothetical protein; hypothetical protein complement(2943301..2943993) Pseudonocardia dioxanivorans CB1190 10364622 YP_004332840.1 CDS Psed_2787 NC_015312.1 2944045 2944659 R KEGG: amd:AMED_2329 hypothetical protein; hypothetical protein complement(2944045..2944659) Pseudonocardia dioxanivorans CB1190 10364623 YP_004332841.1 CDS Psed_2788 NC_015312.1 2944769 2945056 D hypothetical protein 2944769..2945056 Pseudonocardia dioxanivorans CB1190 10364624 YP_004332842.1 CDS Psed_2789 NC_015312.1 2945050 2945370 D hypothetical protein 2945050..2945370 Pseudonocardia dioxanivorans CB1190 10364625 YP_004332843.1 CDS Psed_2790 NC_015312.1 2945367 2945504 D hypothetical protein 2945367..2945504 Pseudonocardia dioxanivorans CB1190 10364626 YP_004332844.1 CDS Psed_2791 NC_015312.1 2945504 2946202 D KEGG: stp:Strop_3242 hypothetical protein; hypothetical protein 2945504..2946202 Pseudonocardia dioxanivorans CB1190 10364627 YP_004332845.1 CDS Psed_2792 NC_015312.1 2946205 2947092 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sen:SACE_5874 plasmid partitioning protein; Cobyrinic acid ac-diamide synthase complement(2946205..2947092) Pseudonocardia dioxanivorans CB1190 10364628 YP_004332846.1 CDS Psed_2793 NC_015312.1 2947193 2947900 D PFAM: Methyltransferase type 12; KEGG: ami:Amir_5788 methyltransferase type 12; type 12 methyltransferase 2947193..2947900 Pseudonocardia dioxanivorans CB1190 10364629 YP_004332847.1 CDS Psed_2794 NC_015312.1 2948280 2948669 D KEGG: msp:Mspyr1_23110 hypothetical protein; hypothetical protein 2948280..2948669 Pseudonocardia dioxanivorans CB1190 10364630 YP_004332848.1 CDS Psed_2795 NC_015312.1 2948620 2951118 R KEGG: sen:SACE_5871 transglutaminase-like; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; transglutaminase domain-containing protein complement(2948620..2951118) Pseudonocardia dioxanivorans CB1190 10364631 YP_004332849.1 CDS Psed_2796 NC_015312.1 2951115 2952413 R PFAM: Domain of unknown function DUF58; KEGG: ami:Amir_5777 protein of unknown function DUF58; hypothetical protein complement(2951115..2952413) Pseudonocardia dioxanivorans CB1190 10364632 YP_004332850.1 CDS Psed_2797 NC_015312.1 2952419 2953444 R PFAM: ATPase, AAA-3; KEGG: ami:Amir_5776 ATPase associated with various cellular activities AAA_3; ATPase complement(2952419..2953444) Pseudonocardia dioxanivorans CB1190 10364633 YP_004332851.1 CDS Psed_2798 NC_015312.1 2953889 2954320 D TIGRFAM: MraZ; HAMAP: MraZ; KEGG: amd:AMED_6261 MraZ protein; PFAM: MraZ domain; protein mraZ 2953889..2954320 Pseudonocardia dioxanivorans CB1190 10364634 YP_004332852.1 CDS Psed_2799 NC_015312.1 2954574 2955554 D TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: sen:SACE_5866 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; ribosomal RNA small subunit methyltransferase H 2954574..2955554 Pseudonocardia dioxanivorans CB1190 10364635 YP_004332853.1 CDS Psed_2800 NC_015312.1 2955634 2958420 D PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sen:SACE_5864 penicillin-binding (cell division related) protein; penicillin-binding protein transpeptidase 2955634..2958420 Pseudonocardia dioxanivorans CB1190 10364636 YP_004332854.1 CDS Psed_2801 NC_015312.1 2958771 2960276 D PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: tpr:Tpau_2651 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 2958771..2960276 Pseudonocardia dioxanivorans CB1190 10364637 YP_004332855.1 CDS Psed_2802 NC_015312.1 2960273 2961739 D TIGRFAM: UDP-MurNAc-pentapeptide synthetase; KEGG: ami:Amir_5770 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 2960273..2961739 Pseudonocardia dioxanivorans CB1190 10364638 YP_004332856.1 CDS Psed_2803 NC_015312.1 2961736 2962806 D TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: ami:Amir_5769 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 2961736..2962806 Pseudonocardia dioxanivorans CB1190 10364639 YP_004332857.1 CDS Psed_2804 NC_015312.1 2962806 2964203 D PFAM: Mur ligase, central; Alcohol dehydrogenase, C-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: ami:Amir_5768 UDP-N-acetylmuramoylalanine/D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 2962806..2964203 Pseudonocardia dioxanivorans CB1190 10364640 YP_004332858.1 CDS Psed_2805 NC_015312.1 2964200 2965573 D KEGG: sen:SACE_5852 cell division membrane protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 2964200..2965573 Pseudonocardia dioxanivorans CB1190 10364641 YP_004332859.1 CDS Psed_2806 NC_015312.1 2965570 2966655 D TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: N-acetylglucosaminyltransferase, MurG; KEGG: ami:Amir_5763 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 2965570..2966655 Pseudonocardia dioxanivorans CB1190 10364642 YP_004332860.1 CDS Psed_2807 NC_015312.1 2966652 2968082 D PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: ami:Amir_5762 UDP-N-acetylmuramate--L-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 2966652..2968082 Pseudonocardia dioxanivorans CB1190 10364643 YP_004332861.1 CDS Psed_2808 NC_015312.1 2968079 2969461 D PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: mjl:Mjls_3265 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 2968079..2969461 Pseudonocardia dioxanivorans CB1190 10364644 YP_004332862.1 CDS Psed_2809 NC_015312.1 2969634 2971082 D TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: sen:SACE_5835 cell division GTPase; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 2969634..2971082 Pseudonocardia dioxanivorans CB1190 10364645 YP_004332863.1 CDS Psed_2810 NC_015312.1 2971122 2971823 D KEGG: svi:Svir_27360 conserved hypothetical protein TIGR00726; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; multi-copper polyphenol oxidoreductase, laccase 2971122..2971823 Pseudonocardia dioxanivorans CB1190 10364646 YP_004332864.1 CDS Psed_2811 NC_015312.1 2972309 2973049 D KEGG: mau:Micau_4469 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein 2972309..2973049 Pseudonocardia dioxanivorans CB1190 10364647 YP_004332865.1 CDS Psed_2812 NC_015312.1 2973104 2973850 D KEGG: ami:Amir_5757 protein of unknown function DUF552; HAMAP: Cell division protein SepF; PFAM: Cell division protein SepF/SepF-related; cell division protein sepF 2973104..2973850 Pseudonocardia dioxanivorans CB1190 10364648 YP_004332866.1 CDS Psed_2813 NC_015312.1 2973854 2974141 D PFAM: Uncharacterised protein family Ycf19; KEGG: svi:Svir_27330 YGGT family protein; hypothetical protein 2973854..2974141 Pseudonocardia dioxanivorans CB1190 10364649 YP_004332867.1 CDS Psed_2814 NC_015312.1 2974188 2975048 D KEGG: sen:SACE_5830 cell division initiation protein; TIGRFAM: DivIVA domain; PFAM: DivIVA; DivIVA domain-containing protein 2974188..2975048 Pseudonocardia dioxanivorans CB1190 10364650 YP_004332868.1 CDS Psed_2815 NC_015312.1 2975113 2976855 D KEGG: rci:RRC32 hypothetical protein; hypothetical protein 2975113..2976855 Pseudonocardia dioxanivorans CB1190 10364651 YP_004332869.1 CDS Psed_2816 NC_015312.1 2977218 2980508 D TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase, class Ia; KEGG: sen:SACE_5828 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 2977218..2980508 Pseudonocardia dioxanivorans CB1190 10364652 YP_004332870.1 CDS Psed_2817 NC_015312.1 2980709 2981338 R PFAM: SNARE associated Golgi protein; KEGG: amd:AMED_6495 DedA-like membrane protein; hypothetical protein complement(2980709..2981338) Pseudonocardia dioxanivorans CB1190 10364653 YP_004332871.1 CDS Psed_2818 NC_015312.1 2981491 2982303 D PFAM: Conserved hypothetical protein CHP00245; KEGG: mil:ML5_2013 abc transport system permease; hypothetical protein 2981491..2982303 Pseudonocardia dioxanivorans CB1190 10364654 YP_004332872.1 CDS Psed_2819 NC_015312.1 2982300 2983058 D PFAM: Methyltransferase type 12; KEGG: tcu:Tcur_3103 type 12 methyltransferase; type 12 methyltransferase 2982300..2983058 Pseudonocardia dioxanivorans CB1190 10364655 YP_004332873.1 CDS Psed_2820 NC_015312.1 2983065 2983886 R KEGG: nml:Namu_3868 hypothetical protein; hypothetical protein complement(2983065..2983886) Pseudonocardia dioxanivorans CB1190 10364656 YP_004332874.1 CDS Psed_2821 NC_015312.1 2983886 2984560 R KEGG: sma:SAV_4878 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(2983886..2984560) Pseudonocardia dioxanivorans CB1190 10364657 YP_004332875.1 CDS Psed_2822 NC_015312.1 2984557 2985864 R PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: sma:SAV_4879 two-component system sensor kinase; histidine kinase complement(2984557..2985864) Pseudonocardia dioxanivorans CB1190 10364658 YP_004332876.1 CDS Psed_2823 NC_015312.1 2986112 2986846 R PFAM: Abortive infection protein; KEGG: nml:Namu_5061 abortive infection protein; abortive infection protein complement(2986112..2986846) Pseudonocardia dioxanivorans CB1190 10364659 YP_004332877.1 CDS Psed_2824 NC_015312.1 2986918 2988096 D KEGG: nml:Namu_5060 hypothetical protein; hypothetical protein 2986918..2988096 Pseudonocardia dioxanivorans CB1190 10364660 YP_004332878.1 CDS Psed_2825 NC_015312.1 2988195 2989712 D PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; KEGG: ami:Amir_5749 potassium/proton antiporter; sodium/hydrogen exchanger 2988195..2989712 Pseudonocardia dioxanivorans CB1190 10364661 YP_004332879.1 CDS Psed_2826 NC_015312.1 2989831 2990769 D KEGG: sen:SACE_5823 ribosomal large subunit pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; RluA family pseudouridine synthase 2989831..2990769 Pseudonocardia dioxanivorans CB1190 10364662 YP_004332880.1 CDS Psed_2827 NC_015312.1 2990780 2991460 D KEGG: req:REQ_27610 protein; hypothetical protein 2990780..2991460 Pseudonocardia dioxanivorans CB1190 10364663 YP_004332881.1 CDS Psed_2828 NC_015312.1 2991557 2992276 D KEGG: ami:Amir_5161 hypothetical protein; hypothetical protein 2991557..2992276 Pseudonocardia dioxanivorans CB1190 10364664 YP_004332882.1 CDS Psed_2829 NC_015312.1 2992273 2993226 D KEGG: sen:SACE_0678 integral membrane protein; hypothetical protein 2992273..2993226 Pseudonocardia dioxanivorans CB1190 10364665 YP_004332883.1 CDS Psed_2830 NC_015312.1 2993288 2994469 D PFAM: Glycosyl transferase, group 1; KEGG: ami:Amir_5160 glycosyl transferase group 1; group 1 glycosyl transferase 2993288..2994469 Pseudonocardia dioxanivorans CB1190 10364666 YP_004332884.1 CDS Psed_2831 NC_015312.1 2994755 2998312 D SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: ace:Acel_1054 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA polymerase III subunit alpha 2994755..2998312 Pseudonocardia dioxanivorans CB1190 10364667 YP_004332885.1 CDS Psed_2832 NC_015312.1 2998551 3000038 R PFAM: Protein of unknown function DUF1486; KEGG: pfs:PFLU3206 dehydratase; hypothetical protein complement(2998551..3000038) Pseudonocardia dioxanivorans CB1190 10364668 YP_004332886.1 CDS Psed_2833 NC_015312.1 3000318 3001664 R PFAM: General substrate transporter; KEGG: bts:Btus_3048 major facilitator superfamily MFS_1; general substrate transporter complement(3000318..3001664) Pseudonocardia dioxanivorans CB1190 10364669 YP_004332887.1 CDS Psed_2834 NC_015312.1 3001796 3002575 R PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal; KEGG: cai:Caci_2009 transcriptional regulator, PaaX family; PaaX family transcriptional regulator complement(3001796..3002575) Pseudonocardia dioxanivorans CB1190 10364670 YP_004332888.1 CDS Psed_2835 NC_015312.1 3002713 3004026 D TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: ami:Amir_5742 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase; PFAM: Aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3002713..3004026 Pseudonocardia dioxanivorans CB1190 10364671 YP_004332889.1 CDS Psed_2836 NC_015312.1 3004132 3004911 R PFAM: Methyltransferase type 11; KEGG: jan:Jann_3724 methyltransferase type 11; type 11 methyltransferase complement(3004132..3004911) Pseudonocardia dioxanivorans CB1190 10364672 YP_004332890.1 CDS Psed_2837 NC_015312.1 3005032 3006171 D KEGG: mjl:Mjls_3094 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; 8-amino-7-oxononanoate synthase 3005032..3006171 Pseudonocardia dioxanivorans CB1190 10364673 YP_004332891.1 CDS Psed_2838 NC_015312.1 3006168 3006866 D KEGG: sen:SACE_0978 dithiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; dethiobiotin synthetase 3006168..3006866 Pseudonocardia dioxanivorans CB1190 10364674 YP_004332892.1 CDS Psed_2839 NC_015312.1 3006863 3007906 D KEGG: nfa:nfa18320 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; Biotin/thiamin synthesis-associated protein; biotin synthase 3006863..3007906 Pseudonocardia dioxanivorans CB1190 10364675 YP_004332893.1 CDS Psed_2840 NC_015312.1 3007903 3008121 D KEGG: cai:Caci_7732 hypothetical protein; hypothetical protein 3007903..3008121 Pseudonocardia dioxanivorans CB1190 10364676 YP_004332894.1 CDS Psed_2841 NC_015312.1 3008129 3008749 D KEGG: req:REQ_29570 hypothetical protein; hypothetical protein 3008129..3008749 Pseudonocardia dioxanivorans CB1190 10364677 YP_004332895.1 CDS Psed_2842 NC_015312.1 3008802 3008969 D hypothetical protein 3008802..3008969 Pseudonocardia dioxanivorans CB1190 10364678 YP_004332896.1 CDS Psed_2843 NC_015312.1 3008966 3009667 R KEGG: amd:AMED_2221 ATP-dependent protease Lon; PFAM: Peptidase S16, lon N-terminal; SMART: Peptidase S16, lon N-terminal; peptidase S16 lon domain-containing protein complement(3008966..3009667) Pseudonocardia dioxanivorans CB1190 10364679 YP_004332897.1 CDS Psed_2844 NC_015312.1 3009645 3010355 R PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_5731 NUDIX hydrolase; NUDIX hydrolase complement(3009645..3010355) Pseudonocardia dioxanivorans CB1190 10364680 YP_004332898.1 CDS Psed_2845 NC_015312.1 3010530 3011525 D PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A, type 2; KEGG: msp:Mspyr1_29620 quinolinate synthetase A; quinolinate synthase A 3010530..3011525 Pseudonocardia dioxanivorans CB1190 10364681 YP_004332899.1 CDS Psed_2846 NC_015312.1 3011522 3013225 D TIGRFAM: L-aspartate oxidase; KEGG: ami:Amir_5729 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 3011522..3013225 Pseudonocardia dioxanivorans CB1190 10364682 YP_004332900.1 CDS Psed_2847 NC_015312.1 3013222 3014115 D TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: ami:Amir_5728 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal; nicotinate-nucleotide pyrophosphorylase 3013222..3014115 Pseudonocardia dioxanivorans CB1190 10364683 YP_004332901.1 CDS Psed_2848 NC_015312.1 3014288 3015613 D PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: amd:AMED_2251 histidinol dehydrogenase; histidinol dehydrogenase 3014288..3015613 Pseudonocardia dioxanivorans CB1190 10364684 YP_004332902.1 CDS Psed_2849 NC_015312.1 3015610 3016749 D PFAM: Aminotransferase, class I/classII; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: sen:SACE_5777 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 3015610..3016749 Pseudonocardia dioxanivorans CB1190 10364685 YP_004332903.1 CDS Psed_2850 NC_015312.1 3016746 3017348 D HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: amd:AMED_2253 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 3016746..3017348 Pseudonocardia dioxanivorans CB1190 10364686 YP_004332904.1 CDS Psed_2851 NC_015312.1 3017708 3018466 D TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: sen:SACE_5761 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit HisH 3017708..3018466 Pseudonocardia dioxanivorans CB1190 10364687 YP_004332905.1 CDS Psed_2852 NC_015312.1 3018640 3018831 D hypothetical protein 3018640..3018831 Pseudonocardia dioxanivorans CB1190 10364688 YP_004332906.1 CDS Psed_2853 NC_015312.1 3018850 3019884 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: bbt:BBta_2188 methionine synthase (B12-independent); vitamin-B12 independent methionine synthase 3018850..3019884 Pseudonocardia dioxanivorans CB1190 10364689 YP_004332907.1 CDS Psed_2854 NC_015312.1 3019934 3020701 D PFAM: Histidine biosynthesis; TIGRFAM: Bifunctional HisA/TrpF; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: ami:Amir_5712 phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] 3019934..3020701 Pseudonocardia dioxanivorans CB1190 10364690 YP_004332908.1 CDS Psed_2855 NC_015312.1 3020701 3021471 D PFAM: Histidine biosynthesis; TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Histidine biosynthesis, HisF; KEGG: amd:AMED_2282 cyclase HisF; imidazole glycerol phosphate synthase subunit HisF 3020701..3021471 Pseudonocardia dioxanivorans CB1190 10364691 YP_004332909.1 CDS Psed_2856 NC_015312.1 3021468 3021821 D HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: nca:Noca_3032 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 3021468..3021821 Pseudonocardia dioxanivorans CB1190 10364692 YP_004332910.1 CDS Psed_2857 NC_015312.1 3021834 3022712 R PFAM: Protein of unknown function DUF2236; KEGG: mkm:Mkms_4278 hypothetical protein; hypothetical protein complement(3021834..3022712) Pseudonocardia dioxanivorans CB1190 10364693 YP_004332911.1 CDS Psed_2858 NC_015312.1 3022822 3023736 R KEGG: kfl:Kfla_6210 hypothetical protein; hypothetical protein complement(3022822..3023736) Pseudonocardia dioxanivorans CB1190 10364694 YP_004332912.1 CDS Psed_2859 NC_015312.1 3023844 3025103 D PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: amd:AMED_2841 two-component system histidine kinase; histidine kinase 3023844..3025103 Pseudonocardia dioxanivorans CB1190 10364695 YP_004332913.1 CDS Psed_2860 NC_015312.1 3025100 3025774 D KEGG: mau:Micau_1043 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 3025100..3025774 Pseudonocardia dioxanivorans CB1190 10364696 YP_004332914.1 CDS Psed_2861 NC_015312.1 3025804 3026469 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_5754 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3025804..3026469) Pseudonocardia dioxanivorans CB1190 10364697 YP_004332915.1 CDS Psed_2862 NC_015312.1 3026496 3028088 D TIGRFAM: Anthranilate synthase component I, PabB-like; KEGG: sen:SACE_5753 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I 3026496..3028088 Pseudonocardia dioxanivorans CB1190 10364698 YP_004332916.1 CDS Psed_2863 NC_015312.1 3028085 3028756 D PFAM: Trp biosynthesis associated, transmembrane protein, Oprn/Chp; KEGG: cai:Caci_5713 hypothetical protein; Trp biosynthesis associated, transmembrane protein, Oprn/Chp 3028085..3028756 Pseudonocardia dioxanivorans CB1190 10364699 YP_004332917.1 CDS Psed_2864 NC_015312.1 3028806 3029645 D KEGG: amd:AMED_2293 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 3028806..3029645 Pseudonocardia dioxanivorans CB1190 10364700 YP_004332918.1 CDS Psed_2865 NC_015312.1 3029695 3030993 D PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; KEGG: amd:AMED_2294 tryptophan synthase beta chain; tryptophan synthase subunit beta 3029695..3030993 Pseudonocardia dioxanivorans CB1190 10364701 YP_004332919.1 CDS Psed_2866 NC_015312.1 3030990 3031787 D PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: amd:AMED_2295 tryptophan synthase alpha chain; tryptophan synthase subunit alpha 3030990..3031787 Pseudonocardia dioxanivorans CB1190 10364702 YP_004332920.1 CDS Psed_2867 NC_015312.1 3032085 3033143 D TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: sen:SACE_5746 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 3032085..3033143 Pseudonocardia dioxanivorans CB1190 10364703 YP_004332921.1 CDS Psed_2868 NC_015312.1 3033148 3033786 D KEGG: ami:Amir_5689 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein CHP02453; hypothetical protein 3033148..3033786 Pseudonocardia dioxanivorans CB1190 10364704 YP_004332922.1 CDS Psed_2869 NC_015312.1 3034030 3035448 D TIGRFAM: Pyruvate kinase; KEGG: ami:Amir_5687 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; pyruvate kinase 3034030..3035448 Pseudonocardia dioxanivorans CB1190 10364705 YP_004332923.1 CDS Psed_2870 NC_015312.1 3035525 3036424 D KEGG: sen:SACE_5719 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase; choloyl-CoA hydrolase 3035525..3036424 Pseudonocardia dioxanivorans CB1190 10364706 YP_004332924.1 CDS Psed_2871 NC_015312.1 3036611 3037174 D PFAM: Peroxiredoxin, OsmC-like protein; KEGG: rha:RHA1_ro05070 hypothetical protein; OsmC family protein 3036611..3037174 Pseudonocardia dioxanivorans CB1190 10364707 YP_004332925.1 CDS Psed_2872 NC_015312.1 3037219 3038520 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: kra:Krad_3362 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-acetylhomoserine/O-acetylserine sulfhydrylase 3037219..3038520 Pseudonocardia dioxanivorans CB1190 10364708 YP_004332926.1 CDS Psed_2873 NC_015312.1 3038520 3039020 D KEGG: bcv:Bcav_3436 CoA-binding domain protein; PFAM: CoA-binding; SMART: CoA-binding; CoA-binding domain-containing protein 3038520..3039020 Pseudonocardia dioxanivorans CB1190 10364709 YP_004332927.1 CDS Psed_2874 NC_015312.1 3039037 3039558 R hypothetical protein complement(3039037..3039558) Pseudonocardia dioxanivorans CB1190 10364710 YP_004332928.1 CDS Psed_2875 NC_015312.1 3039687 3040673 D TIGRFAM: Malate dehydrogenase, NAD/NADP; HAMAP: Malate dehydrogenase; KEGG: fri:FraEuI1c_4622 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase, C-terminal; Lactate/malate dehydrogenase, N-terminal; malate dehydrogenase 3039687..3040673 Pseudonocardia dioxanivorans CB1190 10364711 YP_004332929.1 CDS Psed_2876 NC_015312.1 3040886 3041485 D PFAM: CAP domain; KEGG: art:Arth_3166 allergen V5/TPX-1 family protein; hypothetical protein 3040886..3041485 Pseudonocardia dioxanivorans CB1190 10364712 YP_004332930.1 CDS Psed_2877 NC_015312.1 3041654 3042214 D PFAM: Domain of unknown function DUF820; KEGG: mil:ML5_3927 hypothetical protein; hypothetical protein 3041654..3042214 Pseudonocardia dioxanivorans CB1190 10364713 YP_004332931.1 CDS Psed_2878 NC_015312.1 3042224 3043960 R SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: amd:AMED_2594 maltooligosyltrehalose trehalohydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; malto-oligosyltrehalose trehalohydrolase complement(3042224..3043960) Pseudonocardia dioxanivorans CB1190 10364714 YP_004332932.1 CDS Psed_2879 NC_015312.1 3044005 3046446 R SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Malto-oligosyltrehalose synthase; KEGG: amd:AMED_2593 maltooligosyl trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; malto-oligosyltrehalose synthase complement(3044005..3046446) Pseudonocardia dioxanivorans CB1190 10364715 YP_004332933.1 CDS Psed_2880 NC_015312.1 3046443 3048626 R SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Glycogen debranching enzyme; KEGG: amd:AMED_2592 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; glycogen debranching protein GlgX complement(3046443..3048626) Pseudonocardia dioxanivorans CB1190 10364716 YP_004332934.1 CDS Psed_2881 NC_015312.1 3048972 3049436 R KEGG: kfl:Kfla_3151 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein complement(3048972..3049436) Pseudonocardia dioxanivorans CB1190 10364717 YP_004332935.1 CDS Psed_2882 NC_015312.1 3049496 3049924 D PFAM: Histidine triad (HIT) protein; KEGG: mlu:Mlut_07820 HIT family hydrolase, diadenosine tetraphosphate hydrolase; histidine triad (HIT) protein 3049496..3049924 Pseudonocardia dioxanivorans CB1190 10364718 YP_004332936.1 CDS Psed_2883 NC_015312.1 3049926 3050555 D KEGG: req:REQ_41490 phosphoglycerate/bisphosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 3049926..3050555 Pseudonocardia dioxanivorans CB1190 10364719 YP_004332937.1 CDS Psed_2884 NC_015312.1 3050693 3052000 D PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_1263 hypothetical protein; major facilitator superfamily protein 3050693..3052000 Pseudonocardia dioxanivorans CB1190 10364720 YP_004332938.1 CDS Psed_2885 NC_015312.1 3053047 3053907 R KEGG: stp:Strop_1435 hypothetical protein; hypothetical protein complement(3053047..3053907) Pseudonocardia dioxanivorans CB1190 10364721 YP_004332939.1 CDS Psed_2886 NC_015312.1 3054069 3055376 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: amd:AMED_1262 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 3054069..3055376 Pseudonocardia dioxanivorans CB1190 10364722 YP_004332940.1 CDS Psed_2887 NC_015312.1 3055532 3056899 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: amd:AMED_1947 GGDEF domain-containing diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 3055532..3056899 Pseudonocardia dioxanivorans CB1190 10364723 YP_004332941.1 CDS Psed_2888 NC_015312.1 3056930 3058999 D KEGG: sen:SACE_1815 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; 1-deoxy-D-xylulose-5-phosphate synthase 3056930..3058999 Pseudonocardia dioxanivorans CB1190 10364724 YP_004332942.1 CDS Psed_2889 NC_015312.1 3058999 3059664 D KEGG: svi:Svir_24140 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 3058999..3059664 Pseudonocardia dioxanivorans CB1190 10364725 YP_004332943.1 CDS Psed_2890 NC_015312.1 3059676 3060857 D KEGG: sen:SACE_1818 two-component sensor (kinase); PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 3059676..3060857 Pseudonocardia dioxanivorans CB1190 10364726 YP_004332944.1 CDS Psed_2891 NC_015312.1 3060888 3062072 R KEGG: ami:Amir_1548 3'-5' exonuclease; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; SMART: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; 3'-5' exonuclease complement(3060888..3062072) Pseudonocardia dioxanivorans CB1190 10364727 YP_004332945.1 CDS Psed_2892 NC_015312.1 3062150 3062866 R KEGG: ami:Amir_1549 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(3062150..3062866) Pseudonocardia dioxanivorans CB1190 10364728 YP_004332946.1 CDS Psed_2893 NC_015312.1 3063120 3063713 R KEGG: svi:Svir_24100 hypothetical protein; hypothetical protein complement(3063120..3063713) Pseudonocardia dioxanivorans CB1190 10364729 YP_004332947.1 CDS Psed_2894 NC_015312.1 3063811 3064881 D PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: amd:AMED_2643 uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 3063811..3064881 Pseudonocardia dioxanivorans CB1190 10364730 YP_004332948.1 CDS Psed_2895 NC_015312.1 3064881 3066335 D TIGRFAM: Protoporphyrinogen oxidase; KEGG: ami:Amir_1553 protoporphyrinogen oxidase; PFAM: Amine oxidase; protoporphyrinogen oxidase 3064881..3066335 Pseudonocardia dioxanivorans CB1190 10364731 YP_004332949.1 CDS Psed_2896 NC_015312.1 3066413 3067108 D PFAM: Chlorite dismutase; KEGG: svi:Svir_24070 hypothetical protein; chlorite dismutase 3066413..3067108 Pseudonocardia dioxanivorans CB1190 10364732 YP_004332950.1 CDS Psed_2897 NC_015312.1 3067155 3067862 R PFAM: LysR, substrate-binding; KEGG: kfl:Kfla_3836 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3067155..3067862) Pseudonocardia dioxanivorans CB1190 10364733 YP_004332951.1 CDS Psed_2898 NC_015312.1 3067906 3068307 D manually curated; KEGG: sen:SACE_4610 hypothetical protein; hypothetical protein 3067906..3068307 Pseudonocardia dioxanivorans CB1190 10364734 YP_004332952.1 CDS Psed_2899 NC_015312.1 3068348 3068806 R TIGRFAM: Methionine sulphoxide reductase B; KEGG: rop:ROP_68470 peptide methionine sulfoxide reductase MsrB; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase complement(3068348..3068806) Pseudonocardia dioxanivorans CB1190 10364735 YP_004332953.1 CDS Psed_2900 NC_015312.1 3068846 3069157 R KEGG: svi:Svir_24050 hypothetical protein; hypothetical protein complement(3068846..3069157) Pseudonocardia dioxanivorans CB1190 10364736 YP_004332954.1 CDS Psed_2901 NC_015312.1 3069242 3070282 D KEGG: sen:SACE_1849 DNA ligase (ATP); TIGRFAM: DNA polymerase LigD, polymerase domain; PFAM: DNA primase, small subunit; DNA polymerase LigD, polymerase domain-containing protein 3069242..3070282 Pseudonocardia dioxanivorans CB1190 10364737 YP_004332955.1 CDS Psed_2902 NC_015312.1 3070433 3070666 D hypothetical protein 3070433..3070666 Pseudonocardia dioxanivorans CB1190 10364738 YP_004332956.1 CDS Psed_2903 NC_015312.1 3070710 3072329 R PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; KEGG: sen:SACE_1857 proteinase (secreted protein); TAP domain-containing protein complement(3070710..3072329) Pseudonocardia dioxanivorans CB1190 10364739 YP_004332957.1 CDS Psed_2904 NC_015312.1 3072412 3073095 R KEGG: sen:SACE_1862 hypothetical protein; hypothetical protein complement(3072412..3073095) Pseudonocardia dioxanivorans CB1190 10364740 YP_004332958.1 CDS Psed_2905 NC_015312.1 3073092 3073646 R KEGG: sen:SACE_1863 hypothetical protein; hypothetical protein complement(3073092..3073646) Pseudonocardia dioxanivorans CB1190 10364741 YP_004332959.1 CDS Psed_2906 NC_015312.1 3073690 3074091 R KEGG: sen:SACE_1864 hypothetical protein; hypothetical protein complement(3073690..3074091) Pseudonocardia dioxanivorans CB1190 10364742 YP_004332960.1 CDS Psed_2907 NC_015312.1 3074097 3074276 R KEGG: sen:SACE_1865 hypothetical protein; hypothetical protein complement(3074097..3074276) Pseudonocardia dioxanivorans CB1190 10364743 YP_004332961.1 CDS Psed_2908 NC_015312.1 3074273 3074578 R KEGG: fal:FRAAL6273 GTP-binding protein; hypothetical protein complement(3074273..3074578) Pseudonocardia dioxanivorans CB1190 10364744 YP_004332962.1 CDS Psed_2909 NC_015312.1 3074575 3074985 R KEGG: sen:SACE_1867 hypothetical protein; hypothetical protein complement(3074575..3074985) Pseudonocardia dioxanivorans CB1190 10364745 YP_004332963.1 CDS Psed_2910 NC_015312.1 3074982 3075497 R PFAM: Alkaline shock protein Asp23; KEGG: sen:SACE_1868 stress-like protein; hypothetical protein complement(3074982..3075497) Pseudonocardia dioxanivorans CB1190 10364746 YP_004332964.1 CDS Psed_2911 NC_015312.1 3075679 3076449 R PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: ami:Amir_1580 bifunctional deaminase-reductase domain protein; bifunctional deaminase-reductase domain-containing protein complement(3075679..3076449) Pseudonocardia dioxanivorans CB1190 10364747 YP_004332965.1 CDS Psed_2912 NC_015312.1 3076660 3077703 D PFAM: ABC transporter permease; KEGG: sro:Sros_7986 ABC transporter, permease, Fe3+-siderophore transport system; ABC transporter permease 3076660..3077703 Pseudonocardia dioxanivorans CB1190 10364748 YP_004332966.1 CDS Psed_2913 NC_015312.1 3077700 3078803 D PFAM: ABC transporter permease; KEGG: sen:SACE_0412 Fe(3+) enterobactin transport system permease; ABC transporter permease 3077700..3078803 Pseudonocardia dioxanivorans CB1190 10364749 YP_004332967.1 CDS Psed_2914 NC_015312.1 3078800 3079633 D PFAM: ABC transporter-like; KEGG: sro:Sros_7988 ABC transporter related protein; SMART: ATPase, AAA+ type, core; iron-chelate-transporting ATPase 3078800..3079633 Pseudonocardia dioxanivorans CB1190 10364750 YP_004332968.1 CDS Psed_2915 NC_015312.1 3079665 3080519 D KEGG: nml:Namu_3539 hypothetical protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related; polyphosphate:nucleotide phosphotransferase 3079665..3080519 Pseudonocardia dioxanivorans CB1190 10364751 YP_004332969.1 CDS Psed_2916 NC_015312.1 3080548 3081543 R PFAM: Phosphate transporter; KEGG: sro:Sros_0892 phosphate transporter; phosphate transporter complement(3080548..3081543) Pseudonocardia dioxanivorans CB1190 10364752 YP_004332970.1 CDS Psed_2917 NC_015312.1 3081545 3082213 R PFAM: Putitive phosphate transport regulator; KEGG: sgr:SGR_3928 Pit accessory protein; phosphate transport regulator complement(3081545..3082213) Pseudonocardia dioxanivorans CB1190 10364753 YP_004332971.1 CDS Psed_2918 NC_015312.1 3082324 3083712 D PFAM: FAD linked oxidase, N-terminal; KEGG: sen:SACE_1991 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 3082324..3083712 Pseudonocardia dioxanivorans CB1190 10364754 YP_004332972.1 CDS Psed_2919 NC_015312.1 3083709 3084950 D PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase; KEGG: sen:SACE_1992 cyclopropane-fatty-acyl-phospholipid synthase; SMART: Polyketide synthase, methyltransferase domain; cyclopropane-fatty-acyl-phospholipid synthase 3083709..3084950 Pseudonocardia dioxanivorans CB1190 10364755 YP_004332973.1 CDS Psed_2920 NC_015312.1 3084960 3086387 D KEGG: sen:SACE_6439 hypothetical protein; TIGRFAM: Acyltransferase, WS/DGAT/MGAT; PFAM: O-acyltransferase, WSD1, N-terminal; acyltransferase 3084960..3086387 Pseudonocardia dioxanivorans CB1190 10364756 YP_004332974.1 CDS Psed_2921 NC_015312.1 3086407 3087750 R PFAM: Protein of unknown function DUF2252; KEGG: srt:Srot_2797 hypothetical protein; hypothetical protein complement(3086407..3087750) Pseudonocardia dioxanivorans CB1190 10364757 YP_004332975.1 CDS Psed_2922 NC_015312.1 3087821 3089407 R KEGG: eli:ELI_02000 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(3087821..3089407) Pseudonocardia dioxanivorans CB1190 10364758 YP_004332976.1 CDS Psed_2923 NC_015312.1 3089404 3090282 R PFAM: Amidohydrolase 2; KEGG: tbi:Tbis_1611 amidohydrolase 2; amidohydrolase complement(3089404..3090282) Pseudonocardia dioxanivorans CB1190 10364759 YP_004332977.1 CDS Psed_2924 NC_015312.1 3090279 3091169 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cfl:Cfla_0293 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(3090279..3091169) Pseudonocardia dioxanivorans CB1190 10364760 YP_004332978.1 CDS Psed_2925 NC_015312.1 3091178 3092350 R KEGG: ami:Amir_1569 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase complement(3091178..3092350) Pseudonocardia dioxanivorans CB1190 10364761 YP_004332979.1 CDS Psed_2926 NC_015312.1 3092347 3093186 R KEGG: mjl:Mjls_1207 dehydratase; PFAM: MaoC-like dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase complement(3092347..3093186) Pseudonocardia dioxanivorans CB1190 10364762 YP_004332980.1 CDS Psed_2927 NC_015312.1 3093229 3094851 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter substrate-binding protein complement(3093229..3094851) Pseudonocardia dioxanivorans CB1190 10364763 YP_004332981.1 CDS Psed_2928 NC_015312.1 3095300 3096151 R PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: ami:Amir_0874 fructosamine kinase; fructosamine/Ketosamine-3-kinase complement(3095300..3096151) Pseudonocardia dioxanivorans CB1190 10364764 YP_004332982.1 CDS Psed_2929 NC_015312.1 3096148 3096648 R KEGG: sen:SACE_1579 low molecular weight protein-tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase complement(3096148..3096648) Pseudonocardia dioxanivorans CB1190 10364765 YP_004332983.1 CDS Psed_2930 NC_015312.1 3097083 3098180 D PFAM: Aminotransferase, class I/classII; KEGG: sen:SACE_1581 hypothetical protein; class I and II aminotransferase 3097083..3098180 Pseudonocardia dioxanivorans CB1190 10364766 YP_004332984.1 CDS Psed_2931 NC_015312.1 3098192 3099442 R PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 complement(3098192..3099442) Pseudonocardia dioxanivorans CB1190 10364767 YP_004332985.1 CDS Psed_2932 NC_015312.1 3099694 3100845 D KEGG: ami:Amir_0879 protein of unknown function DUF34; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 3099694..3100845 Pseudonocardia dioxanivorans CB1190 10364768 YP_004332986.1 CDS Psed_2933 NC_015312.1 3100842 3101582 D PFAM: Protein of unknown function DUF164; KEGG: ami:Amir_0880 protein of unknown function DUF164; hypothetical protein 3100842..3101582 Pseudonocardia dioxanivorans CB1190 10364769 YP_004332987.1 CDS Psed_2934 NC_015312.1 3101579 3102265 D KEGG: req:REQ_28750 RNase H domain phosphoglycerate/bisphosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 3101579..3102265 Pseudonocardia dioxanivorans CB1190 10364770 YP_004332988.1 CDS Psed_2935 NC_015312.1 3102288 3103697 R PFAM: Divalent ion symporter; KEGG: mjl:Mjls_5120 arsenical pump membrane protein; citrate transporter complement(3102288..3103697) Pseudonocardia dioxanivorans CB1190 10364771 YP_004332989.1 CDS Psed_2936 NC_015312.1 3103694 3104458 R PFAM: Protein of unknown function DUF81; KEGG: sen:SACE_1215 hypothetical protein; hypothetical protein complement(3103694..3104458) Pseudonocardia dioxanivorans CB1190 10364772 YP_004332990.1 CDS Psed_2937 NC_015312.1 3105525 3106853 D KEGG: amd:AMED_5856 predicted HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 3105525..3106853 Pseudonocardia dioxanivorans CB1190 10364774 YP_004332991.1 CDS Psed_2938 NC_015312.1 3107236 3108474 D KEGG: sen:SACE_5712 retron-type reverse transcriptase; PFAM: Reverse transcriptase; RNA-directed DNA polymerase 3107236..3108474 Pseudonocardia dioxanivorans CB1190 10364775 YP_004332992.1 CDS Psed_2939 NC_015312.1 3108664 3109389 R KEGG: ske:Sked_13370 acyltransferase; acyltransferase complement(3108664..3109389) Pseudonocardia dioxanivorans CB1190 10364776 YP_004332993.1 CDS Psed_2940 NC_015312.1 3109464 3110114 R KEGG: cwo:Cwoe_3319 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(3109464..3110114) Pseudonocardia dioxanivorans CB1190 10364777 YP_004332994.1 CDS Psed_2941 NC_015312.1 3110914 3111513 D KEGG: scb:SCAB_9041 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 3110914..3111513 Pseudonocardia dioxanivorans CB1190 10364778 YP_004332995.1 CDS Psed_2942 NC_015312.1 3111524 3112498 R KEGG: sro:Sros_2497 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(3111524..3112498) Pseudonocardia dioxanivorans CB1190 10364779 YP_004332996.1 CDS Psed_2943 NC_015312.1 3112677 3113894 D PFAM: Monooxygenase, FAD-binding; KEGG: kfl:Kfla_5841 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein 3112677..3113894 Pseudonocardia dioxanivorans CB1190 10364780 YP_004332997.1 CDS Psed_2944 NC_015312.1 3113958 3116621 D KEGG: ach:Achl_0605 pyruvate phosphate dikinase PEP/pyruvate-binding; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; pyruvate, water dikinase 3113958..3116621 Pseudonocardia dioxanivorans CB1190 10364781 YP_004332998.1 CDS Psed_2945 NC_015312.1 3116821 3118437 D KEGG: tfu:Tfu_0359 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 3116821..3118437 Pseudonocardia dioxanivorans CB1190 10364782 YP_004332999.1 CDS Psed_2946 NC_015312.1 3118454 3120001 R KEGG: cai:Caci_5446 hypothetical protein; hypothetical protein complement(3118454..3120001) Pseudonocardia dioxanivorans CB1190 10364783 YP_004333000.1 CDS Psed_2947 NC_015312.1 3120276 3120956 D PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nfa:nfa35310 hypothetical protein; haloacid dehalogenase 3120276..3120956 Pseudonocardia dioxanivorans CB1190 10364784 YP_004333001.1 CDS Psed_2948 NC_015312.1 3120983 3122218 R KEGG: bbt:BBta_3103 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase complement(3120983..3122218) Pseudonocardia dioxanivorans CB1190 10364785 YP_004333002.1 CDS Psed_2949 NC_015312.1 3122438 3123349 R KEGG: hse:Hsero_0938 AraC family transcription regulator protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(3122438..3123349) Pseudonocardia dioxanivorans CB1190 10364786 YP_004333003.1 CDS Psed_2950 NC_015312.1 3123482 3124651 R KEGG: amd:AMED_2797 hypothetical protein; hypothetical protein complement(3123482..3124651) Pseudonocardia dioxanivorans CB1190 10364787 YP_004333004.1 CDS Psed_2951 NC_015312.1 3124772 3125953 R KEGG: gob:Gobs_0880 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase complement(3124772..3125953) Pseudonocardia dioxanivorans CB1190 10364788 YP_004333005.1 CDS Psed_2952 NC_015312.1 3125950 3126633 R PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: gbr:Gbro_4318 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G complement(3125950..3126633) Pseudonocardia dioxanivorans CB1190 10364789 YP_004333006.1 CDS Psed_2953 NC_015312.1 3126814 3128871 D KEGG: sro:Sros_6595 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 3126814..3128871 Pseudonocardia dioxanivorans CB1190 10364790 YP_004333007.1 CDS Psed_2954 NC_015312.1 3128874 3130766 D KEGG: cai:Caci_1877 hydantoinase B/oxoprolinase; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 3128874..3130766 Pseudonocardia dioxanivorans CB1190 10364791 YP_004333008.1 CDS Psed_2955 NC_015312.1 3130873 3131727 D KEGG: nca:Noca_0687 regulatory proteins, IclR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 3130873..3131727 Pseudonocardia dioxanivorans CB1190 10364792 YP_004333009.1 CDS Psed_2956 NC_015312.1 3131941 3133413 D PFAM: ABC transporter-like; KEGG: req:REQ_19950 abc transporter atpase suunit; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 3131941..3133413 Pseudonocardia dioxanivorans CB1190 10364793 YP_004333010.1 CDS Psed_2957 NC_015312.1 3133416 3134438 D PFAM: ABC transporter permease; KEGG: eca:ECA1461 sugar ABC transporter permease; ABC transporter permease 3133416..3134438 Pseudonocardia dioxanivorans CB1190 10364794 YP_004333011.1 CDS Psed_2958 NC_015312.1 3134482 3135504 D KEGG: dap:Dacet_0219 periplasmic binding protein/LacI transcriptional regulator; hypothetical protein 3134482..3135504 Pseudonocardia dioxanivorans CB1190 10364795 YP_004333012.1 CDS Psed_2959 NC_015312.1 3135574 3136446 D KEGG: sti:Sthe_2308 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 3135574..3136446 Pseudonocardia dioxanivorans CB1190 10364796 YP_004333013.1 CDS Psed_2960 NC_015312.1 3136443 3136997 D KEGG: fri:FraEuI1c_5530 (2Fe-2S)-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 3136443..3136997 Pseudonocardia dioxanivorans CB1190 10364797 YP_004333014.1 CDS Psed_2961 NC_015312.1 3137001 3139403 D KEGG: tro:trd_0579 oxidoreductase, large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 3137001..3139403 Pseudonocardia dioxanivorans CB1190 10364798 YP_004333015.1 CDS Psed_2962 NC_015312.1 3139426 3140256 D KEGG: hel:HELO_1462 hypothetical protein; hypothetical protein 3139426..3140256 Pseudonocardia dioxanivorans CB1190 10364799 YP_004333016.1 CDS Psed_2963 NC_015312.1 3140296 3141780 R KEGG: nda:Ndas_2606 carboxyl transferase; PFAM: Carboxyl transferase; acetyl-CoA carboxylase complement(3140296..3141780) Pseudonocardia dioxanivorans CB1190 10364800 YP_004333017.1 CDS Psed_2964 NC_015312.1 3142018 3143490 D PFAM: Amidase; KEGG: rxy:Rxyl_0238 amidase; amidase 3142018..3143490 Pseudonocardia dioxanivorans CB1190 10364801 YP_004333018.1 CDS Psed_2965 NC_015312.1 3143487 3144278 D PFAM: Creatininase; KEGG: bha:BH0226 creatinine amidohydrolase; creatininase 3143487..3144278 Pseudonocardia dioxanivorans CB1190 10364802 YP_004333019.1 CDS Psed_2966 NC_015312.1 3144517 3145602 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpy:Bphyt_4245 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 3144517..3145602 Pseudonocardia dioxanivorans CB1190 10364803 YP_004333020.1 CDS Psed_2967 NC_015312.1 3145638 3145853 D hypothetical protein 3145638..3145853 Pseudonocardia dioxanivorans CB1190 10364804 YP_004333021.1 CDS Psed_2968 NC_015312.1 3145865 3147058 D KEGG: bpy:Bphyt_4247 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 3145865..3147058 Pseudonocardia dioxanivorans CB1190 10364805 YP_004333022.1 CDS Psed_2969 NC_015312.1 3147063 3149741 R KEGG: cwo:Cwoe_1524 ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Tetratricopeptide repeat; LuxR family transcriptional regulator complement(3147063..3149741) Pseudonocardia dioxanivorans CB1190 10364806 YP_004333023.1 CDS Psed_2970 NC_015312.1 3149836 3150795 R KEGG: cai:Caci_1104 aldo/keto reductase; aldo/keto reductase complement(3149836..3150795) Pseudonocardia dioxanivorans CB1190 10364807 YP_004333024.1 CDS Psed_2971 NC_015312.1 3150792 3151583 R KEGG: msm:MSMEG_2125 glycerol operon regulatory protein; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(3150792..3151583) Pseudonocardia dioxanivorans CB1190 10364808 YP_004333025.1 CDS Psed_2972 NC_015312.1 3151742 3152743 D TIGRFAM: Dihydroxyacetone kinase DhaK, subunit 1; KEGG: gob:Gobs_2347 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; dihydroxyacetone kinase subunit DhaK 3151742..3152743 Pseudonocardia dioxanivorans CB1190 10364809 YP_004333026.1 CDS Psed_2973 NC_015312.1 3152740 3153369 D KEGG: gob:Gobs_2346 dihydroxyacetone kinase, L subunit; TIGRFAM: Dihydroxyacetone kinase, subunit L; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit DhaL 3152740..3153369 Pseudonocardia dioxanivorans CB1190 10364810 YP_004333027.1 CDS Psed_2974 NC_015312.1 3153366 3155960 D TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; Dihydroxyacetone kinase, subunit phosphotransferase; KEGG: msm:MSMEG_2121 multiphosphoryl transfer protein (MTP); PFAM: PEP-utilising enzyme; Phosphotransferase system, fructose subfamily IIA component; Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; phosphoenolpyruvate-protein phosphotransferase 3153366..3155960 Pseudonocardia dioxanivorans CB1190 10364811 YP_004333028.1 CDS Psed_2975 NC_015312.1 3156001 3156546 R PFAM: NADPH-dependent FMN reductase; KEGG: hla:Hlac_1047 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(3156001..3156546) Pseudonocardia dioxanivorans CB1190 10364812 YP_004333029.1 CDS Psed_2976 NC_015312.1 3156543 3157076 R manually curated; PFAM: Flavin reductase-like, FMN-binding; KEGG: gob:Gobs_5034 flavin reductase domain-containing protein FMN-binding protein; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein complement(3156543..3157076) Pseudonocardia dioxanivorans CB1190 10364813 YP_004333030.1 CDS Psed_2977 NC_015312.1 3157257 3158732 D KEGG: mjl:Mjls_4075 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde dehydrogenase domain; betaine-aldehyde dehydrogenase 3157257..3158732 Pseudonocardia dioxanivorans CB1190 10364814 YP_004333031.1 CDS Psed_2978 NC_015312.1 3158922 3159968 R KEGG: svi:Svir_24480 RNA polymerase sigma factor SigB; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4; RpoD subfamily RNA polymerase sigma-70 subunit complement(3158922..3159968) Pseudonocardia dioxanivorans CB1190 10364815 YP_004333032.1 CDS Psed_2979 NC_015312.1 3160164 3161939 D PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; Alpha/beta hydrolase fold-1; KEGG: nml:Namu_4720 poly-beta-hydroxybutyrate polymerase domain-containing protein; poly-beta-hydroxybutyrate polymerase domain-containing protein 3160164..3161939 Pseudonocardia dioxanivorans CB1190 10364816 YP_004333033.1 CDS Psed_2980 NC_015312.1 3162000 3162458 D KEGG: nfa:nfa52090 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 3162000..3162458 Pseudonocardia dioxanivorans CB1190 10364817 YP_004333034.1 CDS Psed_2981 NC_015312.1 3162489 3162911 R TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: amd:AMED_2569 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(3162489..3162911) Pseudonocardia dioxanivorans CB1190 10364818 YP_004333035.1 CDS Psed_2982 NC_015312.1 3162908 3164401 R PFAM: Methyltransferase small; KEGG: sen:SACE_1788 rRNA/tRNA methylase; methyltransferase small complement(3162908..3164401) Pseudonocardia dioxanivorans CB1190 10364819 YP_004333036.1 CDS Psed_2983 NC_015312.1 3165041 3166627 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter substrate-binding protein 3165041..3166627 Pseudonocardia dioxanivorans CB1190 10364820 YP_004333037.1 CDS Psed_2984 NC_015312.1 3166635 3167267 D KEGG: mau:Micau_1581 HhH-GPD family protein; TIGRFAM: Conserved hypothetical protein CHP03252, HhH-GPD; PFAM: HhH-GPD domain; HhH-GPD family protein 3166635..3167267 Pseudonocardia dioxanivorans CB1190 10364821 YP_004333038.1 CDS Psed_2985 NC_015312.1 3167309 3167764 D KEGG: fre:Franean1_3539 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 3167309..3167764 Pseudonocardia dioxanivorans CB1190 10364822 YP_004333039.1 CDS Psed_2986 NC_015312.1 3167936 3168256 D KEGG: amd:AMED_2572 hypothetical protein; hypothetical protein 3167936..3168256 Pseudonocardia dioxanivorans CB1190 10364823 YP_004333040.1 CDS Psed_2987 NC_015312.1 3168320 3169249 R KEGG: ami:Amir_1499 indigoidine synthase A family protein; HAMAP: Pseudouridine-5'-phosphate glycosidase; PFAM: Pseudouridine-5'-phosphate glycosidase; pseudouridine-5'-phosphate glycosidase complement(3168320..3169249) Pseudonocardia dioxanivorans CB1190 10364824 YP_004333041.1 CDS Psed_2988 NC_015312.1 3169256 3169504 D KEGG: ami:Amir_1500 hypothetical protein; hypothetical protein 3169256..3169504 Pseudonocardia dioxanivorans CB1190 10364825 YP_004333042.1 CDS Psed_2989 NC_015312.1 3169526 3170389 R KEGG: rha:RHA1_ro03776 poly(3-hydroxyalkanoic acid) depolymerase; TIGRFAM: Poly(3-hydroxyalkanoate) depolymerase; PFAM: Alpha/beta hydrolase fold-1; poly(3-hydroxyalkanoate) depolymerase complement(3169526..3170389) Pseudonocardia dioxanivorans CB1190 10364826 YP_004333043.1 CDS Psed_2990 NC_015312.1 3170386 3171765 R PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; KEGG: rop:ROP_36330 polyhydroxyalkanoate synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein complement(3170386..3171765) Pseudonocardia dioxanivorans CB1190 10364827 YP_004333044.1 CDS Psed_2991 NC_015312.1 3172028 3173758 D KEGG: sen:SACE_1795 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; type III restriction protein res subunit 3172028..3173758 Pseudonocardia dioxanivorans CB1190 10364828 YP_004333045.1 CDS Psed_2992 NC_015312.1 3173761 3174984 D TIGRFAM: Cysteine desulfurase-related; KEGG: sen:SACE_1797 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase 3173761..3174984 Pseudonocardia dioxanivorans CB1190 10364829 YP_004333046.1 CDS Psed_2993 NC_015312.1 3175088 3175273 R KEGG: sen:SACE_1798 hypothetical protein; hypothetical protein complement(3175088..3175273) Pseudonocardia dioxanivorans CB1190 10364830 YP_004333047.1 CDS Psed_2994 NC_015312.1 3175491 3176465 D PFAM: Drug/metabolite transporter; KEGG: svi:Svir_24340 predicted permease, DMT superfamily; hypothetical protein 3175491..3176465 Pseudonocardia dioxanivorans CB1190 10364831 YP_004333048.1 CDS Psed_2995 NC_015312.1 3176952 3178082 D KEGG: ami:Amir_1503 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 3176952..3178082 Pseudonocardia dioxanivorans CB1190 10364832 YP_004333049.1 CDS Psed_2996 NC_015312.1 3178167 3178946 D PFAM: ABC transporter-like; KEGG: ami:Amir_1504 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 3178167..3178946 Pseudonocardia dioxanivorans CB1190 10364833 YP_004333050.1 CDS Psed_2997 NC_015312.1 3178943 3180460 D PFAM: ABC transporter permease; KEGG: ami:Amir_1505 inner-membrane translocator; ABC transporter permease 3178943..3180460 Pseudonocardia dioxanivorans CB1190 10364834 YP_004333051.1 CDS Psed_2998 NC_015312.1 3180457 3181629 D KEGG: ami:Amir_1506 ROK family protein; PFAM: ROK; glucokinase 3180457..3181629 Pseudonocardia dioxanivorans CB1190 10364835 YP_004333052.1 CDS Psed_2999 NC_015312.1 3181765 3181911 D hypothetical protein 3181765..3181911 Pseudonocardia dioxanivorans CB1190 10364836 YP_004333053.1 CDS Psed_3000 NC_015312.1 3182178 3183428 D KEGG: kra:Krad_0463 aspartate kinase; TIGRFAM: Aspartate kinase domain; PFAM: Aspartate/glutamate/uridylate kinase; aspartate kinase 3182178..3183428 Pseudonocardia dioxanivorans CB1190 10364837 YP_004333054.1 CDS Psed_3001 NC_015312.1 3183638 3189808 D SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Non-ribosomal peptide synthetase C-terminal; Amino acid adenylation; Diaminobutyrate-2-oxoglutarate transaminase; KEGG: aau:AAur_pTC10155 non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Bacterial transferase hexapeptide repeat; Aminotransferase class-III; non-ribosomal peptide synthetase domain-containing protein 3183638..3189808 Pseudonocardia dioxanivorans CB1190 10364838 YP_004333055.1 CDS Psed_3002 NC_015312.1 3189885 3190310 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sna:Snas_0252 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3189885..3190310) Pseudonocardia dioxanivorans CB1190 10364839 YP_004333056.1 CDS Psed_3003 NC_015312.1 3190555 3190773 R KEGG: rop:ROP_68040 hypothetical protein; hypothetical protein complement(3190555..3190773) Pseudonocardia dioxanivorans CB1190 10364840 YP_004333057.1 CDS Psed_3004 NC_015312.1 3190779 3191006 R KEGG: ami:Amir_1687 hypothetical protein; hypothetical protein complement(3190779..3191006) Pseudonocardia dioxanivorans CB1190 10364841 YP_004333058.1 CDS Psed_3005 NC_015312.1 3191162 3193780 R KEGG: sen:SACE_3314 surface layer protein; TIGRFAM: YVTN beta-propeller repeat; PFAM: Heat shock protein 70; hypothetical protein complement(3191162..3193780) Pseudonocardia dioxanivorans CB1190 10364842 YP_004333059.1 CDS Psed_3007 NC_015312.1 3194682 3195347 D KEGG: fal:FRAAL3267 transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator 3194682..3195347 Pseudonocardia dioxanivorans CB1190 10364844 YP_004333060.1 CDS Psed_3008 NC_015312.1 3195458 3196840 D KEGG: sen:SACE_3311 hypothetical protein; hypothetical protein 3195458..3196840 Pseudonocardia dioxanivorans CB1190 10364845 YP_004333061.1 CDS Psed_3009 NC_015312.1 3196845 3202397 D PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; KEGG: sen:SACE_3310 signal transduction histidine kinase; histidine kinase 3196845..3202397 Pseudonocardia dioxanivorans CB1190 10364846 YP_004333062.1 CDS Psed_3010 NC_015312.1 3202428 3203642 R PFAM: Acyltransferase 3; KEGG: amd:AMED_6015 acyltransferase; acyltransferase complement(3202428..3203642) Pseudonocardia dioxanivorans CB1190 10364847 YP_004333063.1 CDS Psed_3011 NC_015312.1 3203920 3204930 D KEGG: gob:Gobs_3633 ANTAR domain-containing protein; hypothetical protein 3203920..3204930 Pseudonocardia dioxanivorans CB1190 10364848 YP_004333064.1 CDS Psed_3012 NC_015312.1 3205116 3206147 D manually curated; KEGG: rop:ROP_13020 hypothetical protein; hypothetical protein 3205116..3206147 Pseudonocardia dioxanivorans CB1190 10364849 YP_004333065.1 CDS Psed_3013 NC_015312.1 3206144 3206986 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_13030 ABC transporter permease; ABC transporter permease 3206144..3206986 Pseudonocardia dioxanivorans CB1190 10364850 YP_004333066.1 CDS Psed_3014 NC_015312.1 3206979 3207749 D PFAM: ABC transporter-like; KEGG: rer:RER_40110 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 3206979..3207749 Pseudonocardia dioxanivorans CB1190 10364851 YP_004333067.1 CDS Psed_3015 NC_015312.1 3207754 3207975 D hypothetical protein 3207754..3207975 Pseudonocardia dioxanivorans CB1190 10364852 YP_004333068.1 CDS Psed_3016 NC_015312.1 3208100 3209002 R KEGG: ach:Achl_3085 hypothetical protein; hypothetical protein complement(3208100..3209002) Pseudonocardia dioxanivorans CB1190 10364853 YP_004333069.1 CDS Psed_3017 NC_015312.1 3209672 3210889 D TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; KEGG: sgr:SGR_3528 methyltransferase; PFAM: Tetrapyrrole methylase; precorrin-6y C5,15-methyltransferase subunit CbiE 3209672..3210889 Pseudonocardia dioxanivorans CB1190 10364854 YP_004333070.1 CDS Psed_3018 NC_015312.1 3210886 3211629 D TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; KEGG: sen:SACE_5945 precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole methylase; precorrin-4 C11-methyltransferase 3210886..3211629 Pseudonocardia dioxanivorans CB1190 10364855 YP_004333071.1 CDS Psed_3019 NC_015312.1 3211617 3212387 D TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; KEGG: sro:Sros_5596 precorrin-6A reductase; PFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; precorrin-6x reductase 3211617..3212387 Pseudonocardia dioxanivorans CB1190 10364856 YP_004333072.1 CDS Psed_3020 NC_015312.1 3212578 3214131 R TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; KEGG: sro:Sros_5595 precorrin-3B methylase-like protein; PFAM: Tetrapyrrole methylase; precorrin-3B C17-methyltransferase complement(3212578..3214131) Pseudonocardia dioxanivorans CB1190 10364857 YP_004333073.1 CDS Psed_3021 NC_015312.1 3214134 3214760 R KEGG: nfa:nfa31510 precorrin-8X methylmutase; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core; precorrin-8X methylmutase complement(3214134..3214760) Pseudonocardia dioxanivorans CB1190 10364858 YP_004333074.1 CDS Psed_3022 NC_015312.1 3214757 3216082 R PFAM: Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: amd:AMED_7063 precorrin-3B synthase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain-containing protein complement(3214757..3216082) Pseudonocardia dioxanivorans CB1190 10364859 YP_004333075.1 CDS Psed_3023 NC_015312.1 3216275 3219880 D TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: req:REQ_23600 cobaltochelatase CobN; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 3216275..3219880 Pseudonocardia dioxanivorans CB1190 10364860 YP_004333076.1 CDS Psed_3024 NC_015312.1 3219912 3220970 R KEGG: vei:Veis_4611 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase complement(3219912..3220970) Pseudonocardia dioxanivorans CB1190 10364861 YP_004333077.1 CDS Psed_3025 NC_015312.1 3221080 3222540 R TIGRFAM: D-hydantoinase; KEGG: cti:RALTA_A2550 dihydropyrimidinase; PFAM: Amidohydrolase 1; dihydropyrimidinase complement(3221080..3222540) Pseudonocardia dioxanivorans CB1190 10364862 YP_004333078.1 CDS Psed_3026 NC_015312.1 3222540 3223574 R PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease complement(3222540..3223574) Pseudonocardia dioxanivorans CB1190 10364863 YP_004333079.1 CDS Psed_3027 NC_015312.1 3223571 3225145 R PFAM: ABC transporter-like; KEGG: nca:Noca_0100 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase complement(3223571..3225145) Pseudonocardia dioxanivorans CB1190 10364864 YP_004333080.1 CDS Psed_3028 NC_015312.1 3225170 3226351 R KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein complement(3225170..3226351) Pseudonocardia dioxanivorans CB1190 10364865 YP_004333081.1 CDS Psed_3029 NC_015312.1 3226421 3227170 R KEGG: dsh:Dshi_3048 GntR-family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator complement(3226421..3227170) Pseudonocardia dioxanivorans CB1190 10364866 YP_004333082.1 CDS Psed_3030 NC_015312.1 3227308 3228744 D KEGG: bja:blr3295 phenylhydantoinase; PFAM: Amidohydrolase 1; allantoinase 3227308..3228744 Pseudonocardia dioxanivorans CB1190 10364867 YP_004333083.1 CDS Psed_3031 NC_015312.1 3228775 3230241 R PFAM: Amidase; KEGG: syg:sync_2679 enantiomer-selective amidase; amidase complement(3228775..3230241) Pseudonocardia dioxanivorans CB1190 10364868 YP_004333084.1 CDS Psed_3032 NC_015312.1 3230238 3231611 R PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; KEGG: rop:ROP_29700 acetyl-CoA carboxylase biotin carboxylase subunit; SMART: Biotin carboxylase, C-terminal; pyruvate carboxylase complement(3230238..3231611) Pseudonocardia dioxanivorans CB1190 10364869 YP_004333085.1 CDS Psed_3033 NC_015312.1 3231608 3232207 R PFAM: Biotin/lipoyl attachment; KEGG: rop:ROP_29710 acetyl-CoA carboxylase biotin carboxyl carrier protein; biotin/lipoyl attachment domain-containing protein complement(3231608..3232207) Pseudonocardia dioxanivorans CB1190 10364870 YP_004333086.1 CDS Psed_3034 NC_015312.1 3232204 3233712 R KEGG: sti:Sthe_2821 pyruvate carboxylase; PFAM: Carboxylase, conserved domain; Pyruvate carboxyltransferase; pyruvate carboxylase complement(3232204..3233712) Pseudonocardia dioxanivorans CB1190 10364871 YP_004333087.1 CDS Psed_3035 NC_015312.1 3233709 3235157 R SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: avi:Avi_7413 ScoB; PFAM: Coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(3233709..3235157) Pseudonocardia dioxanivorans CB1190 10364872 YP_004333088.1 CDS Psed_3036 NC_015312.1 3235663 3237108 R PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_6047 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3235663..3237108) Pseudonocardia dioxanivorans CB1190 10364873 YP_004333089.1 CDS Psed_3037 NC_015312.1 3237377 3238270 D PFAM: ABC transporter metal-binding lipoprotein; KEGG: nfa:nfa24340 ABC transporter substrate-binding protein; metal ion ABC transporter periplasmic subunit 3237377..3238270 Pseudonocardia dioxanivorans CB1190 10364874 YP_004333090.1 CDS Psed_3038 NC_015312.1 3238267 3239025 D PFAM: ABC transporter-like; KEGG: bfa:Bfae_31320 ATPase component of Mn/Zn ABC-type transporter; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 3238267..3239025 Pseudonocardia dioxanivorans CB1190 10364875 YP_004333091.1 CDS Psed_3039 NC_015312.1 3239022 3239906 D PFAM: ABC-3; KEGG: rha:RHA1_ro07269 zinc ABC transporter permease; ABC transporter permease 3239022..3239906 Pseudonocardia dioxanivorans CB1190 10364876 YP_004333092.1 CDS Psed_3040 NC_015312.1 3239989 3240651 D KEGG: srt:Srot_1549 DtxR family iron (metal) dependent repressor; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor, diptheria toxin type; HTH transcriptional regulator, Crp; Ferrous iron transporter, FeoA subunit; DtxR family iron (metal) dependent repressor 3239989..3240651 Pseudonocardia dioxanivorans CB1190 10364877 YP_004333093.1 CDS Psed_3041 NC_015312.1 3240800 3241276 D PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: msm:MSMEG_0159 formate dehydrogenase, gamma subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 3240800..3241276 Pseudonocardia dioxanivorans CB1190 10364878 YP_004333094.1 CDS Psed_3042 NC_015312.1 3241273 3242772 D PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: msm:MSMEG_0160 formate dehydrogenase, beta subunit; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 3241273..3242772 Pseudonocardia dioxanivorans CB1190 10364879 YP_004333095.1 CDS Psed_3043 NC_015312.1 3242769 3245597 D TIGRFAM: Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S binding domain; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; KEGG: msm:MSMEG_0161 formate dehydrogenase, alpha subunit; SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Molybdopterin oxidoreductase, Fe4S4 domain; formate dehydrogenase subunit alpha 3242769..3245597 Pseudonocardia dioxanivorans CB1190 10364880 YP_004333096.1 CDS Psed_3044 NC_015312.1 3245590 3245844 D KEGG: msm:MSMEG_0162 NAD-dependent formate dehydrogenase delta subunit; hypothetical protein 3245590..3245844 Pseudonocardia dioxanivorans CB1190 10364881 YP_004333097.1 CDS Psed_3045 NC_015312.1 3245874 3246359 R KEGG: scb:SCAB_84441 MarR family regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(3245874..3246359) Pseudonocardia dioxanivorans CB1190 10364882 YP_004333098.1 CDS Psed_3046 NC_015312.1 3246423 3247520 D KEGG: sma:SAV_1189 regulatory protein; regulatory protein 3246423..3247520 Pseudonocardia dioxanivorans CB1190 10364883 YP_004333099.1 CDS Psed_3047 NC_015312.1 3247683 3247973 D KEGG: gob:Gobs_2160 hypothetical protein; hypothetical protein 3247683..3247973 Pseudonocardia dioxanivorans CB1190 10364884 YP_004333100.1 CDS Psed_3048 NC_015312.1 3247975 3248613 D PFAM: AmiS/UreI transporter; KEGG: gob:Gobs_2159 AmiS/UreI transporter; AmiS/UreI transporter 3247975..3248613 Pseudonocardia dioxanivorans CB1190 10364885 YP_004333101.1 CDS Psed_3049 NC_015312.1 3248730 3249983 D KEGG: rha:RHA1_ro02124 formamidase; PFAM: Acetamidase/Formamidase; formamidase 3248730..3249983 Pseudonocardia dioxanivorans CB1190 10364886 YP_004333102.1 CDS Psed_3050 NC_015312.1 3250051 3250356 R hypothetical protein complement(3250051..3250356) Pseudonocardia dioxanivorans CB1190 10364887 YP_004333103.1 CDS Psed_3051 NC_015312.1 3250536 3251921 R KEGG: amd:AMED_2601 RNA polymerase primary sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4; RpoD subfamily RNA polymerase sigma-70 subunit complement(3250536..3251921) Pseudonocardia dioxanivorans CB1190 10364888 YP_004333104.1 CDS Psed_3052 NC_015312.1 3252670 3253560 D KEGG: amd:AMED_2603 myo-inositol-1(or 4)-monophosphatase; PFAM: Inositol monophosphatase; inositol-phosphate phosphatase 3252670..3253560 Pseudonocardia dioxanivorans CB1190 10364889 YP_004333105.1 CDS Psed_3053 NC_015312.1 3253615 3254274 R KEGG: nfa:nfa37560 hypothetical protein; hypothetical protein complement(3253615..3254274) Pseudonocardia dioxanivorans CB1190 10364890 YP_004333106.1 CDS Psed_3054 NC_015312.1 3254271 3255362 R PFAM: Aminoglycoside phosphotransferase; KEGG: gob:Gobs_1868 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(3254271..3255362) Pseudonocardia dioxanivorans CB1190 10364891 YP_004333107.1 CDS Psed_3055 NC_015312.1 3255705 3256007 D KEGG: rop:ROP_68120 hypothetical protein; hypothetical protein 3255705..3256007 Pseudonocardia dioxanivorans CB1190 10364892 YP_004333108.1 CDS Psed_3056 NC_015312.1 3256098 3256589 R KEGG: sen:SACE_1806 hypothetical protein; hypothetical protein complement(3256098..3256589) Pseudonocardia dioxanivorans CB1190 10364893 YP_004333109.1 CDS Psed_3057 NC_015312.1 3256616 3257173 D PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase; HAMAP: DeoxyUTP pyrophosphatase; KEGG: ami:Amir_1515 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; deoxyuridine 5'-triphosphate nucleotidohydrolase 3256616..3257173 Pseudonocardia dioxanivorans CB1190 10364894 YP_004333110.1 CDS Psed_3058 NC_015312.1 3257173 3260358 D KEGG: mmu:12842 collagen, type I, alpha 1; hypothetical protein 3257173..3260358 Pseudonocardia dioxanivorans CB1190 10364895 YP_004333111.1 CDS Psed_3059 NC_015312.1 3261046 3261798 R KEGG: svi:Svir_24240 hypothetical protein; hypothetical protein complement(3261046..3261798) Pseudonocardia dioxanivorans CB1190 10364896 YP_004333112.1 CDS Psed_3060 NC_015312.1 3261957 3262334 D PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: amd:AMED_2610 hypothetical protein; OB-fold tRNA/helicase-type nucleic acid binding-protein 3261957..3262334 Pseudonocardia dioxanivorans CB1190 10364897 YP_004333113.1 CDS Psed_3061 NC_015312.1 3262331 3263287 D KEGG: sen:SACE_1810 integral membrane alanine and leucine rich protein; hypothetical protein 3262331..3263287 Pseudonocardia dioxanivorans CB1190 10364898 YP_004333114.1 CDS Psed_3062 NC_015312.1 3263318 3263974 R PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: sen:SACE_1811 trk system potassium uptake protein; TrkA-N domain-containing protein complement(3263318..3263974) Pseudonocardia dioxanivorans CB1190 10364899 YP_004333115.1 CDS Psed_3063 NC_015312.1 3263980 3264642 R PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: ami:Amir_1521 TrkA-N domain protein; TrkA-N domain-containing protein complement(3263980..3264642) Pseudonocardia dioxanivorans CB1190 10364900 YP_004333116.1 CDS Psed_3064 NC_015312.1 3264742 3266802 D KEGG: ami:Amir_1522 hypothetical protein; hypothetical protein 3264742..3266802 Pseudonocardia dioxanivorans CB1190 10364901 YP_004333117.1 CDS Psed_3065 NC_015312.1 3266799 3267995 D PFAM: Deoxyribonuclease/rho motif-related TRAM; KEGG: amd:AMED_2615 23S rRNA methyltransferase; deoxyribonuclease/rho motif-related TRAM 3266799..3267995 Pseudonocardia dioxanivorans CB1190 10364902 YP_004333118.1 CDS Psed_3066 NC_015312.1 3268021 3268929 D KEGG: tcu:Tcur_4636 hypothetical protein; hypothetical protein 3268021..3268929 Pseudonocardia dioxanivorans CB1190 10364903 YP_004333119.1 CDS Psed_3067 NC_015312.1 3269021 3271516 D KEGG: fra:Francci3_0217 RNA binding S1; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; Tex-like protein 3269021..3271516 Pseudonocardia dioxanivorans CB1190 10364904 YP_004333120.1 CDS Psed_3068 NC_015312.1 3271811 3273790 D KEGG: ami:Amir_2267 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 3271811..3273790 Pseudonocardia dioxanivorans CB1190 10364905 YP_004333121.1 CDS Psed_3069 NC_015312.1 3273868 3274374 R PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein complement(3273868..3274374) Pseudonocardia dioxanivorans CB1190 10364906 YP_004333122.1 CDS Psed_3070 NC_015312.1 3274583 3276004 D PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro03382 MFS superfamily tartrate symporter; major facilitator superfamily protein 3274583..3276004 Pseudonocardia dioxanivorans CB1190 10364907 YP_004333123.1 CDS Psed_3071 NC_015312.1 3276001 3277707 D PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: sen:SACE_1280 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 3276001..3277707 Pseudonocardia dioxanivorans CB1190 10364908 YP_004333124.1 CDS Psed_3072 NC_015312.1 3277784 3278404 D hypothetical protein 3277784..3278404 Pseudonocardia dioxanivorans CB1190 10364909 YP_004333125.1 CDS Psed_3073 NC_015312.1 3278470 3280839 R KEGG: rer:RER_32310 hypothetical protein; hypothetical protein complement(3278470..3280839) Pseudonocardia dioxanivorans CB1190 10364910 YP_004333126.1 CDS Psed_3074 NC_015312.1 3281212 3281670 R KEGG: kfl:Kfla_6569 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(3281212..3281670) Pseudonocardia dioxanivorans CB1190 10364911 YP_004333127.1 CDS Psed_3075 NC_015312.1 3281829 3282905 D KEGG: kfl:Kfla_6568 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase 3281829..3282905 Pseudonocardia dioxanivorans CB1190 10364912 YP_004333128.1 CDS Psed_3076 NC_015312.1 3282911 3283906 D PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: kfl:Kfla_6567 transketolase central region; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase 3282911..3283906 Pseudonocardia dioxanivorans CB1190 10364913 YP_004333129.1 CDS Psed_3077 NC_015312.1 3283903 3285249 D KEGG: kfl:Kfla_6566 catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase 3283903..3285249 Pseudonocardia dioxanivorans CB1190 10364914 YP_004333130.1 CDS Psed_3080 NC_015312.1 3286579 3287472 D PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 3286579..3287472 Pseudonocardia dioxanivorans CB1190 10364917 YP_004333131.1 CDS Psed_3081 NC_015312.1 3287493 3287951 R hypothetical protein complement(3287493..3287951) Pseudonocardia dioxanivorans CB1190 10364918 YP_004333132.1 CDS Psed_3082 NC_015312.1 3288010 3289353 D PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: sen:SACE_4525 cytosine/purines/uracil/thiamine/allantoin family permease; cytosine/purines uracil thiamine allantoin permease 3288010..3289353 Pseudonocardia dioxanivorans CB1190 10364919 YP_004333133.1 CDS Psed_3083 NC_015312.1 3289346 3290947 D KEGG: sro:Sros_5269 N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 1; N-acyl-D-amino-acid deacylase 3289346..3290947 Pseudonocardia dioxanivorans CB1190 10364920 YP_004333134.1 CDS Psed_3084 NC_015312.1 3290887 3292596 R KEGG: sen:SACE_4530 hypothetical protein; transcriptional regulator CdaR complement(3290887..3292596) Pseudonocardia dioxanivorans CB1190 10364921 YP_004333135.1 CDS Psed_3085 NC_015312.1 3292655 3294211 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: gmc:GY4MC1_3873 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase complement(3292655..3294211) Pseudonocardia dioxanivorans CB1190 10364922 YP_004333136.1 CDS Psed_3086 NC_015312.1 3294204 3295280 R PFAM: Protein of unknown function DUF917; KEGG: drm:Dred_1546 hypothetical protein; hypothetical protein complement(3294204..3295280) Pseudonocardia dioxanivorans CB1190 10364923 YP_004333137.1 CDS Psed_3087 NC_015312.1 3295751 3297334 D PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: gmc:GY4MC1_1588 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 3295751..3297334 Pseudonocardia dioxanivorans CB1190 10364924 YP_004333138.1 CDS Psed_3088 NC_015312.1 3297411 3298091 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: art:Arth_3928 reduced coenzyme F420:NADP oxidoreductase; coenzyme F420-dependent NADP oxidoreductase 3297411..3298091 Pseudonocardia dioxanivorans CB1190 10364925 YP_004333139.1 CDS Psed_3089 NC_015312.1 3298204 3298728 D KEGG: cwo:Cwoe_3996 transcriptional activator domain protein; transcriptional activator domain-containing protein 3298204..3298728 Pseudonocardia dioxanivorans CB1190 10364926 YP_004333140.1 CDS Psed_3090 NC_015312.1 3298741 3299634 R PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein complement(3298741..3299634) Pseudonocardia dioxanivorans CB1190 10364927 YP_004333141.1 CDS Psed_3091 NC_015312.1 3299721 3302273 D PFAM: Bacterial transcriptional activator domain; KEGG: ach:Achl_4571 transcriptional activator domain protein; transcriptional activator domain-containing protein 3299721..3302273 Pseudonocardia dioxanivorans CB1190 10364928 YP_004333142.1 CDS Psed_3092 NC_015312.1 3302349 3302888 D KEGG: rxy:Rxyl_1858 GntR family transcriptional regulator; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein 3302349..3302888 Pseudonocardia dioxanivorans CB1190 10364929 YP_004333143.1 CDS Psed_3093 NC_015312.1 3303000 3303854 D KEGG: rer:RER_54230 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; Catechol 1,2-dioxygenase 3303000..3303854 Pseudonocardia dioxanivorans CB1190 10364930 YP_004333144.1 CDS Psed_3094 NC_015312.1 3303947 3305068 D SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: rop:ROP_20860 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; muconate and chloromuconate cycloisomerase 3303947..3305068 Pseudonocardia dioxanivorans CB1190 10364931 YP_004333145.1 CDS Psed_3095 NC_015312.1 3305071 3305355 D KEGG: rer:RER_54210 muconolactone isomerase; PFAM: Muconolactone delta-isomerase; Muconolactone Delta-isomerase 3305071..3305355 Pseudonocardia dioxanivorans CB1190 10364932 YP_004333146.1 CDS Psed_3096 NC_015312.1 3305436 3305960 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nca:Noca_2053 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3305436..3305960 Pseudonocardia dioxanivorans CB1190 10364933 YP_004333147.1 CDS Psed_3097 NC_015312.1 3305957 3307120 D PFAM: Phospholipase/carboxylesterase; KEGG: nca:Noca_2054 phospholipase/carboxylesterase; phospholipase/carboxylesterase 3305957..3307120 Pseudonocardia dioxanivorans CB1190 10364934 YP_004333148.1 CDS Psed_3098 NC_015312.1 3307234 3308028 D TIGRFAM: Cytidyltransferase-related; KEGG: sgr:SGR_1806 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; cytidyltransferase-related domain-containing protein 3307234..3308028 Pseudonocardia dioxanivorans CB1190 10364935 YP_004333149.1 CDS Psed_3099 NC_015312.1 3308199 3309590 R KEGG: rha:RHA1_ro00594 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cysteine synthase complement(3308199..3309590) Pseudonocardia dioxanivorans CB1190 10364936 YP_004333150.1 CDS Psed_3100 NC_015312.1 3309626 3310222 D PFAM: Methyltransferase type 11; KEGG: mgi:Mflv_3090 methyltransferase type 11; type 11 methyltransferase 3309626..3310222 Pseudonocardia dioxanivorans CB1190 10364937 YP_004333151.1 CDS Psed_3101 NC_015312.1 3310305 3311306 D PFAM: Acetamidase/Formamidase; KEGG: fri:FraEuI1c_0390 acetamidase/formamidase; acetamidase/formamidase 3310305..3311306 Pseudonocardia dioxanivorans CB1190 10364938 YP_004333152.1 CDS Psed_3102 NC_015312.1 3311342 3312103 D KEGG: msm:MSMEG_4382 dehydrogenase/reductase SDR family protein member 10; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3311342..3312103 Pseudonocardia dioxanivorans CB1190 10364939 YP_004333153.1 CDS Psed_3103 NC_015312.1 3312108 3313241 D KEGG: kfl:Kfla_5266 epoxide hydrolase domain protein; PFAM: Epoxide hydrolase, N-terminal; Alpha/beta hydrolase fold-1; microsomal epoxide hydrolase 3312108..3313241 Pseudonocardia dioxanivorans CB1190 10364940 YP_004333154.1 CDS Psed_3104 NC_015312.1 3313238 3314122 D KEGG: mil:ML5_5425 periplasmic binding protein; periplasmic binding protein 3313238..3314122 Pseudonocardia dioxanivorans CB1190 10364941 YP_004333155.1 CDS Psed_3105 NC_015312.1 3314106 3315239 R KEGG: mjl:Mjls_1270 ammonia monooxygenase; TIGRFAM: AbrB duplication, membrane protein; PFAM: ammonia monooxygenase; hypothetical protein complement(3314106..3315239) Pseudonocardia dioxanivorans CB1190 10364942 YP_004333156.1 CDS Psed_3106 NC_015312.1 3315331 3317244 D PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: rha:RHA1_ro05645 bifunctional ABC lipid A transporter: ATP-binding/permease; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 3315331..3317244 Pseudonocardia dioxanivorans CB1190 10364943 YP_004333157.1 CDS Psed_3107 NC_015312.1 3317323 3318243 R KEGG: nfa:nfa6330 hypothetical protein; hypothetical protein complement(3317323..3318243) Pseudonocardia dioxanivorans CB1190 10364944 YP_004333158.1 CDS Psed_3108 NC_015312.1 3318360 3319061 D KEGG: sen:SACE_5554 hypothetical protein; hypothetical protein 3318360..3319061 Pseudonocardia dioxanivorans CB1190 10364945 YP_004333159.1 CDS Psed_3109 NC_015312.1 3319058 3319849 D KEGG: amd:AMED_3008 hypothetical protein; hypothetical protein 3319058..3319849 Pseudonocardia dioxanivorans CB1190 10364946 YP_004333160.1 CDS Psed_3110 NC_015312.1 3319929 3320753 R PFAM: Maritimacin/linocin-M18 bacteriocin protein; KEGG: amd:AMED_6577 linocin_M18 bacteriocin protein; Linocin_M18 bacteriocin protein complement(3319929..3320753) Pseudonocardia dioxanivorans CB1190 10364947 YP_004333161.1 CDS Psed_3111 NC_015312.1 3320761 3321360 R PFAM: Haemerythrin/HHE cation-binding motif; KEGG: amd:AMED_6576 hypothetical protein; hemerythrin HHE cation binding domain-containing protein complement(3320761..3321360) Pseudonocardia dioxanivorans CB1190 10364948 YP_004333162.1 CDS Psed_3112 NC_015312.1 3321407 3322168 R PFAM: Domain of unknown function DUF1990; KEGG: svi:Svir_21430 hypothetical protein; hypothetical protein complement(3321407..3322168) Pseudonocardia dioxanivorans CB1190 10364949 YP_004333163.1 CDS Psed_3113 NC_015312.1 3322165 3322443 R KEGG: svi:Svir_21420 hypothetical protein; hypothetical protein complement(3322165..3322443) Pseudonocardia dioxanivorans CB1190 10364950 YP_004333164.1 CDS Psed_3114 NC_015312.1 3322450 3323175 D KEGG: sen:SACE_4249 hypothetical protein; hypothetical protein 3322450..3323175 Pseudonocardia dioxanivorans CB1190 10364951 YP_004333165.1 CDS Psed_3115 NC_015312.1 3323245 3323610 D KEGG: rop:ROP_53610 hypothetical protein; hypothetical protein 3323245..3323610 Pseudonocardia dioxanivorans CB1190 10364952 YP_004333166.1 CDS Psed_3116 NC_015312.1 3323672 3324196 R KEGG: nda:Ndas_3288 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP; hypothetical protein complement(3323672..3324196) Pseudonocardia dioxanivorans CB1190 10364953 YP_004333167.1 CDS Psed_3117 NC_015312.1 3324360 3325943 D KEGG: aau:AAur_3016 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, YjcE-like, bacteria; PFAM: Cation/H+ exchanger; Na+/H+ antiporter 3324360..3325943 Pseudonocardia dioxanivorans CB1190 10364954 YP_004333168.1 CDS Psed_3118 NC_015312.1 3326243 3327055 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa34110 short chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 3326243..3327055 Pseudonocardia dioxanivorans CB1190 10364955 YP_004333169.1 CDS Psed_3119 NC_015312.1 3327088 3327777 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_5753 hypothetical protein; TetR family transcriptional regulator 3327088..3327777 Pseudonocardia dioxanivorans CB1190 10364956 YP_004333170.1 CDS Psed_3120 NC_015312.1 3327808 3329526 R SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; KEGG: tfu:Tfu_0635 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; cysteine ABC transporter permease/ATP-binding protein CydC complement(3327808..3329526) Pseudonocardia dioxanivorans CB1190 10364957 YP_004333171.1 CDS Psed_3121 NC_015312.1 3329523 3331241 R SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; KEGG: tfu:Tfu_0636 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; cysteine ABC transporter permease/ATP-binding protein CydD complement(3329523..3331241) Pseudonocardia dioxanivorans CB1190 10364958 YP_004333172.1 CDS Psed_3122 NC_015312.1 3331253 3332254 R KEGG: tfu:Tfu_0637 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(3331253..3332254) Pseudonocardia dioxanivorans CB1190 10364959 YP_004333173.1 CDS Psed_3123 NC_015312.1 3332266 3333738 R PFAM: Cytochrome d ubiquinol oxidase, subunit I; KEGG: tfu:Tfu_0638 cytochrome oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(3332266..3333738) Pseudonocardia dioxanivorans CB1190 10364960 YP_004333174.1 CDS Psed_3124 NC_015312.1 3333940 3335862 D KEGG: ami:Amir_6419 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; methylmalonyl-CoA mutase 3333940..3335862 Pseudonocardia dioxanivorans CB1190 10364961 YP_004333175.1 CDS Psed_3125 NC_015312.1 3335859 3338039 D TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: amd:AMED_0914 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; methylmalonyl-CoA mutase large subunit 3335859..3338039 Pseudonocardia dioxanivorans CB1190 10364962 YP_004333176.1 CDS Psed_3126 NC_015312.1 3338040 3339023 D TIGRFAM: ArgK protein; PFAM: ArgK protein; KEGG: nda:Ndas_5546 LAO/AO transport system ATPase; SMART: ATPase, AAA+ type, core; LAO/AO transport system ATPase 3338040..3339023 Pseudonocardia dioxanivorans CB1190 10364963 YP_004333177.1 CDS Psed_3127 NC_015312.1 3339126 3340355 D PFAM: Ribonuclease BN-related; KEGG: gob:Gobs_1038 ribonuclease BN; ribonuclease BN 3339126..3340355 Pseudonocardia dioxanivorans CB1190 10364964 YP_004333178.1 CDS Psed_3128 NC_015312.1 3340522 3341289 R PFAM: Aldehyde-lyase domain; KEGG: sen:SACE_0699 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HpcH/HpaI aldolase complement(3340522..3341289) Pseudonocardia dioxanivorans CB1190 10364965 YP_004333179.1 CDS Psed_3129 NC_015312.1 3341412 3342254 D PFAM: Protein of unknown function DUF457, transmembrane; KEGG: sen:SACE_6637 membrane-bound metal-dependent hydrolase; hypothetical protein 3341412..3342254 Pseudonocardia dioxanivorans CB1190 10364966 YP_004333180.1 CDS Psed_3130 NC_015312.1 3342269 3343129 D PFAM: Phosphogluconate dehydrogenase, NAD-binding, , C-terminal; KEGG: fra:Francci3_1825 hypothetical protein; phosphogluconate dehydrogenase, NAD-binding protein 3342269..3343129 Pseudonocardia dioxanivorans CB1190 10364967 YP_004333181.1 CDS Psed_3131 NC_015312.1 3343145 3343309 R hypothetical protein complement(3343145..3343309) Pseudonocardia dioxanivorans CB1190 10364968 YP_004333182.1 CDS Psed_3132 NC_015312.1 3343584 3344765 R KEGG: mjl:Mjls_5013 cytochrome P450; cytochrome P450 complement(3343584..3344765) Pseudonocardia dioxanivorans CB1190 10364969 YP_004333183.1 CDS Psed_3133 NC_015312.1 3345306 3346637 R PFAM: Domain of unknown function DUF1254; Domain of unknown function DUF1214; KEGG: cyn:Cyan7425_2480 protein of unknown function DUF1254; hypothetical protein complement(3345306..3346637) Pseudonocardia dioxanivorans CB1190 10364970 YP_004333184.1 CDS Psed_3135 NC_015312.1 3347007 3347630 R TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: mav:MAV_0227 hypothetical protein; hypothetical protein complement(3347007..3347630) Pseudonocardia dioxanivorans CB1190 10364972 YP_004333185.1 CDS Psed_3136 NC_015312.1 3347908 3348831 D KEGG: scb:SCAB_1521 hydrolase; hydrolase 3347908..3348831 Pseudonocardia dioxanivorans CB1190 10364973 YP_004333186.1 CDS Psed_3137 NC_015312.1 3348844 3350364 R TIGRFAM: F420-dependent oxidoreductase, MSMEG2906; KEGG: svi:Svir_27940 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; F420-dependent oxidoreductase complement(3348844..3350364) Pseudonocardia dioxanivorans CB1190 10364974 YP_004333187.1 CDS Psed_3138 NC_015312.1 3350577 3351164 D PFAM: Protein of unknown function DUF742; KEGG: sen:SACE_0559 hypothetical protein; hypothetical protein 3350577..3351164 Pseudonocardia dioxanivorans CB1190 10364975 YP_004333188.1 CDS Psed_3139 NC_015312.1 3351208 3352449 D KEGG: mrd:Mrad2831_2474 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; isovaleryl-CoA dehydrogenase 3351208..3352449 Pseudonocardia dioxanivorans CB1190 10364976 YP_004333189.1 CDS Psed_3140 NC_015312.1 3352555 3353160 D manually curated; KEGG: amd:AMED_8046 ArsR family transcriptional regulator; ArsR family transcriptional regulator 3352555..3353160 Pseudonocardia dioxanivorans CB1190 10364977 YP_004333190.1 CDS Psed_3141 NC_015312.1 3353170 3353619 D KEGG: gob:Gobs_3724 hypothetical protein; hypothetical protein 3353170..3353619 Pseudonocardia dioxanivorans CB1190 10364978 YP_004333191.1 CDS Psed_3142 NC_015312.1 3354074 3354475 R hypothetical protein complement(3354074..3354475) Pseudonocardia dioxanivorans CB1190 10364979 YP_004333192.1 CDS Psed_3143 NC_015312.1 3354606 3357128 R KEGG: mil:ML5_2272 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein complement(3354606..3357128) Pseudonocardia dioxanivorans CB1190 10364980 YP_004333193.1 CDS Psed_3144 NC_015312.1 3357414 3359222 D PFAM: Signal transduction histidine kinase, internal region; DNA ligase, ATP-dependent, central; KEGG: cai:Caci_5248 DNA polymerase LigD, ligase domain protein; histidine kinase 3357414..3359222 Pseudonocardia dioxanivorans CB1190 10364981 YP_004333194.1 CDS Psed_3145 NC_015312.1 3359282 3360028 D KEGG: tbi:Tbis_2886 beta-phosphoglucomutase hydrolase; TIGRFAM: Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; beta-phosphoglucomutase hydrolase 3359282..3360028 Pseudonocardia dioxanivorans CB1190 10364982 YP_004333195.1 CDS Psed_3146 NC_015312.1 3360025 3362385 D KEGG: tcu:Tcur_2817 glycoside hydrolase 65 central catalytic; PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; Kojibiose phosphorylase 3360025..3362385 Pseudonocardia dioxanivorans CB1190 10364983 YP_004333196.1 CDS Psed_3147 NC_015312.1 3362401 3363267 R KEGG: sen:SACE_5686 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; SigB/F/G subfamily RNA polymerase sigma-28 subunit complement(3362401..3363267) Pseudonocardia dioxanivorans CB1190 10364984 YP_004333197.1 CDS Psed_3148 NC_015312.1 3363392 3365788 D PFAM: DNA helicase, UvrD/REP type; KEGG: ami:Amir_1311 superfamily I DNA and RNA helicase-like protein; UvrD/REP helicase 3363392..3365788 Pseudonocardia dioxanivorans CB1190 10364985 YP_004333198.1 CDS Psed_3149 NC_015312.1 3365766 3366524 R PFAM: Peptidase C26; KEGG: mbt:JTY_2876 amidotransferase; peptidase C26 complement(3365766..3366524) Pseudonocardia dioxanivorans CB1190 10364986 YP_004333199.1 CDS Psed_3150 NC_015312.1 3366535 3368355 R TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: sen:SACE_3331 ATP-dependent DNA helicase; SMART: RQC domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; ATP-dependent DNA helicase RecQ complement(3366535..3368355) Pseudonocardia dioxanivorans CB1190 10364987 YP_004333200.1 CDS Psed_3151 NC_015312.1 3368538 3369542 D KEGG: amd:AMED_3381 flavin-dependent oxidoreductase; TIGRFAM: Glucose-6-phosphate dehydrogenase, F420-dependent; Glucose-6-phosphate dehydrogenase-related, F420-dependent; PFAM: Luciferase-like, subgroup; glucose-6-phosphate dehydrogenase, F420-dependent 3368538..3369542 Pseudonocardia dioxanivorans CB1190 10364988 YP_004333201.1 CDS Psed_3152 NC_015312.1 3369694 3370233 D PFAM: ATPase-like, ATP-binding domain; KEGG: ami:Amir_3736 PAS/PAC sensor protein; ATP-binding protein 3369694..3370233 Pseudonocardia dioxanivorans CB1190 10364989 YP_004333202.1 CDS Psed_3153 NC_015312.1 3370322 3370573 D hypothetical protein 3370322..3370573 Pseudonocardia dioxanivorans CB1190 10364990 YP_004333203.1 CDS Psed_3154 NC_015312.1 3370653 3371510 R PFAM: Bacterial transcriptional activator domain; KEGG: cwo:Cwoe_4971 transcriptional regulator, SARP family; SARP family transcriptional regulator complement(3370653..3371510) Pseudonocardia dioxanivorans CB1190 10364991 YP_004333204.1 CDS Psed_3155 NC_015312.1 3371705 3372655 R PFAM: ATPase-like, ATP-binding domain; KEGG: sen:SACE_4200 regulator of sigma factor; ATP-binding protein complement(3371705..3372655) Pseudonocardia dioxanivorans CB1190 10364992 YP_004333205.1 CDS Psed_3156 NC_015312.1 3372652 3373659 R PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: scb:SCAB_63591 hypothetical protein; sulfate transporter/antisigma-factor antagonist STAS complement(3372652..3373659) Pseudonocardia dioxanivorans CB1190 10364993 YP_004333206.1 CDS Psed_3157 NC_015312.1 3373883 3375457 R KEGG: tcu:Tcur_0107 thiamine pyrophosphate protein domain-containing protein TPP-binding protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; benzoylformate decarboxylase complement(3373883..3375457) Pseudonocardia dioxanivorans CB1190 10364994 YP_004333207.1 CDS Psed_3158 NC_015312.1 3375454 3375972 R PFAM: Peroxiredoxin, OsmC-like protein; KEGG: amd:AMED_5928 OsmC family protein; OsmC family protein complement(3375454..3375972) Pseudonocardia dioxanivorans CB1190 10364995 YP_004333208.1 CDS Psed_3159 NC_015312.1 3376043 3376717 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ami:Amir_5358 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 3376043..3376717 Pseudonocardia dioxanivorans CB1190 10364996 YP_004333209.1 CDS Psed_3160 NC_015312.1 3376891 3377337 D KEGG: ami:Amir_5356 FHA domain containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; FHA domain-containing protein 3376891..3377337 Pseudonocardia dioxanivorans CB1190 10364997 YP_004333210.1 CDS Psed_3161 NC_015312.1 3377646 3378122 D PFAM: Domain of unknown function DUF151; KEGG: sen:SACE_3844 hypothetical protein; hypothetical protein 3377646..3378122 Pseudonocardia dioxanivorans CB1190 10364998 YP_004333211.1 CDS Psed_3162 NC_015312.1 3378232 3378855 D KEGG: req:REQ_24440 MerR family transcriptional regulator; manually curated; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 3378232..3378855 Pseudonocardia dioxanivorans CB1190 10364999 YP_004333212.1 CDS Psed_3163 NC_015312.1 3379244 3382138 D TIGRFAM: Glycine cleavage system P protein, homodimeric; HAMAP: Glycine cleavage system P protein, homodimeric; KEGG: ami:Amir_5352 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; Aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase 3379244..3382138 Pseudonocardia dioxanivorans CB1190 10365000 YP_004333213.1 CDS Psed_3164 NC_015312.1 3382191 3383072 R KEGG: amd:AMED_4975 hypothetical protein; hypothetical protein complement(3382191..3383072) Pseudonocardia dioxanivorans CB1190 10365001 YP_004333214.1 CDS Psed_3165 NC_015312.1 3383069 3383194 R hypothetical protein complement(3383069..3383194) Pseudonocardia dioxanivorans CB1190 10365002 YP_004333215.1 CDS Psed_3166 NC_015312.1 3383241 3384293 R KEGG: amd:AMED_4974 CBS domain-containing protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; hypothetical protein complement(3383241..3384293) Pseudonocardia dioxanivorans CB1190 10365003 YP_004333216.1 CDS Psed_3167 NC_015312.1 3384283 3385617 R PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: ami:Amir_5344 protein of unknown function DUF21; hypothetical protein complement(3384283..3385617) Pseudonocardia dioxanivorans CB1190 10365004 YP_004333217.1 CDS Psed_3168 NC_015312.1 3385806 3386933 R KEGG: amd:AMED_1128 hypothetical protein; hypothetical protein complement(3385806..3386933) Pseudonocardia dioxanivorans CB1190 10365005 YP_004333218.1 CDS Psed_3169 NC_015312.1 3387182 3388144 D TIGRFAM: Bacterial pantothenate kinase; HAMAP: Bacterial pantothenate kinase; KEGG: kfl:Kfla_6049 pantothenate kinase; Pantothenate kinase 3387182..3388144 Pseudonocardia dioxanivorans CB1190 10365006 YP_004333219.1 CDS Psed_3170 NC_015312.1 3388289 3388780 D KEGG: cai:Caci_2307 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3388289..3388780 Pseudonocardia dioxanivorans CB1190 10365007 YP_004333220.1 CDS Psed_3171 NC_015312.1 3388790 3389587 R PFAM: Protein of unknown function DUF427; KEGG: sna:Snas_3697 hypothetical protein; hypothetical protein complement(3388790..3389587) Pseudonocardia dioxanivorans CB1190 10365008 YP_004333221.1 CDS Psed_3172 NC_015312.1 3389826 3391637 D KEGG: svi:Svir_32540 protein kinase protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 3389826..3391637 Pseudonocardia dioxanivorans CB1190 10365009 YP_004333222.1 CDS Psed_3173 NC_015312.1 3391698 3392504 R PFAM: Protein of unknown function DUF81; KEGG: nml:Namu_3379 hypothetical protein; hypothetical protein complement(3391698..3392504) Pseudonocardia dioxanivorans CB1190 10365010 YP_004333223.1 CDS Psed_3174 NC_015312.1 3392681 3393340 D KEGG: amd:AMED_0183 hypothetical protein; hypothetical protein 3392681..3393340 Pseudonocardia dioxanivorans CB1190 10365011 YP_004333224.1 CDS Psed_3175 NC_015312.1 3393434 3394186 D KEGG: gob:Gobs_3816 hypothetical protein; hypothetical protein 3393434..3394186 Pseudonocardia dioxanivorans CB1190 10365012 YP_004333225.1 CDS Psed_3176 NC_015312.1 3394271 3394666 D PFAM: Helix-turn-helix, HxlR type; KEGG: rha:RHA1_ro02869 ArsR family transcriptional regulator; HxlR family transcriptional regulator 3394271..3394666 Pseudonocardia dioxanivorans CB1190 10365013 YP_004333226.1 CDS Psed_3177 NC_015312.1 3394729 3395349 R PFAM: Nitroreductase-like; KEGG: rop:ROP_36530 hypothetical protein; nitroreductase complement(3394729..3395349) Pseudonocardia dioxanivorans CB1190 10365014 YP_004333227.1 CDS Psed_3178 NC_015312.1 3395465 3396271 D PFAM: Methyltransferase type 11; KEGG: scb:SCAB_7431 hypothetical protein; type 11 methyltransferase 3395465..3396271 Pseudonocardia dioxanivorans CB1190 10365015 YP_004333228.1 CDS Psed_3179 NC_015312.1 3396243 3396956 R KEGG: sma:SAV_2438 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(3396243..3396956) Pseudonocardia dioxanivorans CB1190 10365016 YP_004333229.1 CDS Psed_3180 NC_015312.1 3396953 3398164 R KEGG: sco:SCO5824 two-component sensor; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase complement(3396953..3398164) Pseudonocardia dioxanivorans CB1190 10365017 YP_004333230.1 CDS Psed_3181 NC_015312.1 3398344 3398766 D KEGG: amd:AMED_4550 hypothetical protein; hypothetical protein 3398344..3398766 Pseudonocardia dioxanivorans CB1190 10365018 YP_004333231.1 CDS Psed_3182 NC_015312.1 3398816 3398974 D hypothetical protein 3398816..3398974 Pseudonocardia dioxanivorans CB1190 10365019 YP_004333232.1 CDS Psed_3183 NC_015312.1 3398979 3399824 D PFAM: UspA; KEGG: mil:ML5_5167 UspA domain-containing protein; UspA domain-containing protein 3398979..3399824 Pseudonocardia dioxanivorans CB1190 10365020 YP_004333233.1 CDS Psed_3184 NC_015312.1 3399954 3401669 R TIGRFAM: Allophanate hydrolase; KEGG: sma:SAV_6697 allophanate hydrolase; PFAM: Amidase; allophanate hydrolase complement(3399954..3401669) Pseudonocardia dioxanivorans CB1190 10365021 YP_004333234.1 CDS Psed_3185 NC_015312.1 3401662 3402069 R KEGG: ccs:CCNA_02697 hypothetical protein; hypothetical protein complement(3401662..3402069) Pseudonocardia dioxanivorans CB1190 10365022 YP_004333235.1 CDS Psed_3186 NC_015312.1 3402066 3402773 R PFAM: Isochorismatase-like; KEGG: cai:Caci_6450 isochorismatase hydrolase; isochorismatase hydrolase complement(3402066..3402773) Pseudonocardia dioxanivorans CB1190 10365023 YP_004333236.1 CDS Psed_3187 NC_015312.1 3402773 3403522 R KEGG: fal:FRAAL6172 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(3402773..3403522) Pseudonocardia dioxanivorans CB1190 10365024 YP_004333237.1 CDS Psed_3188 NC_015312.1 3403519 3404553 R TIGRFAM: Amidohydrolase ring-opening, AtzD/TrzD; KEGG: azc:AZC_3892 cyanuric acid amidohydrolase; PFAM: Amidohydrolase ring-opening, AtzD/TrzD; ring-opening amidohydrolase complement(3403519..3404553) Pseudonocardia dioxanivorans CB1190 10365025 YP_004333238.1 CDS Psed_3189 NC_015312.1 3404594 3405664 R KEGG: ske:Sked_01070 monosaccharide-binding protein; hypothetical protein complement(3404594..3405664) Pseudonocardia dioxanivorans CB1190 10365026 YP_004333239.1 CDS Psed_3190 NC_015312.1 3405746 3406846 R PFAM: ABC transporter permease; KEGG: rhi:NGR_c06530 hypothetical ABC transporter permease; ABC transporter permease complement(3405746..3406846) Pseudonocardia dioxanivorans CB1190 10365027 YP_004333240.1 CDS Psed_3191 NC_015312.1 3406843 3408387 R PFAM: ABC transporter-like; KEGG: req:REQ_19950 abc transporter atpase suunit; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase complement(3406843..3408387) Pseudonocardia dioxanivorans CB1190 10365028 YP_004333241.1 CDS Psed_3192 NC_015312.1 3408384 3409415 R KEGG: mpo:Mpop_4351 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; flavanone 3-dioxygenase complement(3408384..3409415) Pseudonocardia dioxanivorans CB1190 10365029 YP_004333242.1 CDS Psed_3193 NC_015312.1 3409668 3410144 D PFAM: Cupin 2, conserved barrel; KEGG: acr:Acry_0320 cupin 2 domain-containing protein; cupin 3409668..3410144 Pseudonocardia dioxanivorans CB1190 10365030 YP_004333243.1 CDS Psed_3194 NC_015312.1 3410146 3411372 R PFAM: FAD dependent oxidoreductase; KEGG: bja:bll6080 hypothetical protein; FAD dependent oxidoreductase complement(3410146..3411372) Pseudonocardia dioxanivorans CB1190 10365031 YP_004333244.1 CDS Psed_3195 NC_015312.1 3411610 3413052 D KEGG: fre:Franean1_5399 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; (R)-6-hydroxynicotine oxidase 3411610..3413052 Pseudonocardia dioxanivorans CB1190 10365032 YP_004333245.1 CDS Psed_3198 NC_015312.1 3415351 3415740 R hypothetical protein complement(3415351..3415740) Pseudonocardia dioxanivorans CB1190 10365035 YP_004333246.1 CDS Psed_3199 NC_015312.1 3416418 3416675 D hypothetical protein 3416418..3416675 Pseudonocardia dioxanivorans CB1190 10365036 YP_004333247.1 CDS Psed_3200 NC_015312.1 3416650 3417393 R PFAM: Protein of unknown function DUF2249; KEGG: msv:Mesil_0266 protein of unknown function DUF2249; hypothetical protein complement(3416650..3417393) Pseudonocardia dioxanivorans CB1190 10365037 YP_004333248.1 CDS Psed_3201 NC_015312.1 3417539 3417901 D PFAM: 4Fe-4S binding domain; KEGG: rop:ROP_00820 7Fe ferredoxin; 4Fe-4S ferredoxin 3417539..3417901 Pseudonocardia dioxanivorans CB1190 10365038 YP_004333249.1 CDS Psed_3202 NC_015312.1 3417894 3418559 D KEGG: rha:RHA1_ro08261 MarR family transcriptional regulator; transcriptional regulator 3417894..3418559 Pseudonocardia dioxanivorans CB1190 10365039 YP_004333250.1 CDS Psed_3203 NC_015312.1 3418784 3419677 D KEGG: sna:Snas_5097 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 3418784..3419677 Pseudonocardia dioxanivorans CB1190 10365040 YP_004333251.1 CDS Psed_3204 NC_015312.1 3420033 3421145 D PFAM: Bacterial extracellular solute-binding, family 1; KEGG: rop:ROP_48590 hypothetical protein; ABC transporter substrate-binding protein 3420033..3421145 Pseudonocardia dioxanivorans CB1190 10365041 YP_004333252.1 CDS Psed_3205 NC_015312.1 3421230 3422945 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_4451 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 3421230..3422945 Pseudonocardia dioxanivorans CB1190 10365042 YP_004333253.1 CDS Psed_3206 NC_015312.1 3423020 3424162 D PFAM: ABC transporter-like; KEGG: fre:Franean1_4452 ABC transporter related; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 3423020..3424162 Pseudonocardia dioxanivorans CB1190 10365043 YP_004333254.1 CDS Psed_3207 NC_015312.1 3424165 3425355 D KEGG: rce:RC1_3257 alpha-methylacyl-CoA racemase; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase 3424165..3425355 Pseudonocardia dioxanivorans CB1190 10365044 YP_004333255.1 CDS Psed_3208 NC_015312.1 3425367 3426590 R KEGG: axy:AXYL_05906 CoA-transferase III family protein 46; PFAM: CoA-transferase III; formyl-CoA transferase complement(3425367..3426590) Pseudonocardia dioxanivorans CB1190 10365045 YP_004333256.1 CDS Psed_3209 NC_015312.1 3426666 3427442 R KEGG: chy:CHY_1745 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(3426666..3427442) Pseudonocardia dioxanivorans CB1190 10365046 YP_004333257.1 CDS Psed_3210 NC_015312.1 3427497 3428663 D KEGG: rer:RER_07930 hypothetical protein; hypothetical protein 3427497..3428663 Pseudonocardia dioxanivorans CB1190 10365047 YP_004333258.1 CDS Psed_3211 NC_015312.1 3428660 3429058 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: rer:RER_07920 hypothetical protein; hypothetical protein 3428660..3429058 Pseudonocardia dioxanivorans CB1190 10365048 YP_004333259.1 CDS Psed_3212 NC_015312.1 3429055 3430215 D KEGG: mav:MAV_4237 YfdE protein; PFAM: CoA-transferase III; formyl-CoA transferase 3429055..3430215 Pseudonocardia dioxanivorans CB1190 10365049 YP_004333260.1 CDS Psed_3213 NC_015312.1 3430212 3430991 D PFAM: Crotonase, core; KEGG: fal:FRAAL3799 enoyl-CoA hydratase; enoyl-CoA hydratase 3430212..3430991 Pseudonocardia dioxanivorans CB1190 10365050 YP_004333261.1 CDS Psed_3214 NC_015312.1 3431350 3432231 R KEGG: saq:Sare_0388 NmrA family protein; NmrA family protein complement(3431350..3432231) Pseudonocardia dioxanivorans CB1190 10365051 YP_004333262.1 CDS Psed_3215 NC_015312.1 3432334 3432891 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mxa:MXAN_2145 TetR family transcriptional regulator; TetR family transcriptional regulator 3432334..3432891 Pseudonocardia dioxanivorans CB1190 10365052 YP_004333263.1 CDS Psed_3216 NC_015312.1 3432900 3434189 R PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_0210 luciferase protein; luciferase-like protein complement(3432900..3434189) Pseudonocardia dioxanivorans CB1190 10365053 YP_004333264.1 CDS Psed_3217 NC_015312.1 3434200 3435078 R PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: fri:FraEuI1c_5766 SMP-30/gluconolaconase/LRE-like region-containing protein; SMP-30/Gluconolaconase/LRE-like region-containing protein complement(3434200..3435078) Pseudonocardia dioxanivorans CB1190 10365054 YP_004333265.1 CDS Psed_3218 NC_015312.1 3435334 3436485 D PFAM: Luciferase-like, subgroup; KEGG: msm:MSMEG_5626 luciferase; luciferase-like protein 3435334..3436485 Pseudonocardia dioxanivorans CB1190 10365055 YP_004333266.1 CDS Psed_3219 NC_015312.1 3436637 3437476 R KEGG: bpm:BURPS1710b_A1438 hypothetical protein; hypothetical protein complement(3436637..3437476) Pseudonocardia dioxanivorans CB1190 10365056 YP_004333267.1 CDS Psed_3220 NC_015312.1 3437570 3438706 D PFAM: Carboxylesterase, type B; KEGG: sro:Sros_0321 carboxylesterase; carboxylesterase type B 3437570..3438706 Pseudonocardia dioxanivorans CB1190 10365057 YP_004333268.1 CDS Psed_3221 NC_015312.1 3438830 3440644 D KEGG: hne:HNE_1286 cyclododecanone monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; phenylacetone monooxygenase 3438830..3440644 Pseudonocardia dioxanivorans CB1190 10365058 YP_004333269.1 CDS Psed_3222 NC_015312.1 3440652 3441890 D PFAM: Amidohydrolase 2; KEGG: fri:FraEuI1c_1886 amidohydrolase 2; amidohydrolase 3440652..3441890 Pseudonocardia dioxanivorans CB1190 10365059 YP_004333270.1 CDS Psed_3223 NC_015312.1 3441982 3443007 D KEGG: nml:Namu_5169 alpha/beta hydrolase fold-3 domain-containing protein; alpha/beta hydrolase 3441982..3443007 Pseudonocardia dioxanivorans CB1190 10365060 YP_004333271.1 CDS Psed_3224 NC_015312.1 3443376 3444293 R KEGG: mav:MAV_3101 oxidoreductase, short chain dehydrogenase/reductase protein; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(3443376..3444293) Pseudonocardia dioxanivorans CB1190 10365061 YP_004333272.1 CDS Psed_3225 NC_015312.1 3444508 3445995 R PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_5274 hypothetical protein; major facilitator superfamily protein complement(3444508..3445995) Pseudonocardia dioxanivorans CB1190 10365062 YP_004333273.1 CDS Psed_3226 NC_015312.1 3446256 3446873 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_13230 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3446256..3446873) Pseudonocardia dioxanivorans CB1190 10365063 YP_004333274.1 CDS Psed_3227 NC_015312.1 3446934 3447557 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rmr:Rmar_2200 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3446934..3447557) Pseudonocardia dioxanivorans CB1190 10365064 YP_004333275.1 CDS Psed_3228 NC_015312.1 3447654 3448415 R KEGG: cwo:Cwoe_2765 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(3447654..3448415) Pseudonocardia dioxanivorans CB1190 10365065 YP_004333276.1 CDS Psed_3229 NC_015312.1 3448619 3450109 D KEGG: mav:MAV_5241 monooxygenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4-hydroxyacetophenone monooxygenase 3448619..3450109 Pseudonocardia dioxanivorans CB1190 10365066 YP_004333277.1 CDS Psed_3230 NC_015312.1 3450106 3450567 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 3450106..3450567 Pseudonocardia dioxanivorans CB1190 10365067 YP_004333278.1 CDS Psed_3231 NC_015312.1 3450554 3450898 D hypothetical protein 3450554..3450898 Pseudonocardia dioxanivorans CB1190 10365068 YP_004333279.1 CDS Psed_3232 NC_015312.1 3450898 3452991 D KEGG: swi:Swit_3075 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 3450898..3452991 Pseudonocardia dioxanivorans CB1190 10365069 YP_004333280.1 CDS Psed_3233 NC_015312.1 3452988 3454811 D PFAM: Hydantoinase B/oxoprolinase; KEGG: reu:Reut_C6222 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 3452988..3454811 Pseudonocardia dioxanivorans CB1190 10365070 YP_004333281.1 CDS Psed_3234 NC_015312.1 3454813 3455733 D KEGG: amt:Amet_1190 hypothetical protein; hypothetical protein 3454813..3455733 Pseudonocardia dioxanivorans CB1190 10365071 YP_004333282.1 CDS Psed_3235 NC_015312.1 3455733 3457478 D KEGG: cwo:Cwoe_4447 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 3455733..3457478 Pseudonocardia dioxanivorans CB1190 10365072 YP_004333283.1 CDS Psed_3236 NC_015312.1 3457727 3458737 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: msm:MSMEG_5845 C4-dicarboxylate transporter; C4-dicarboxylate transporter/malic acid transport protein 3457727..3458737 Pseudonocardia dioxanivorans CB1190 10365073 YP_004333284.1 CDS Psed_3239 NC_015312.1 3459838 3460188 D KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 3459838..3460188 Pseudonocardia dioxanivorans CB1190 10365076 YP_004333285.1 CDS Psed_3240 NC_015312.1 3460228 3461652 D PFAM: Extracellular ligand-binding receptor; KEGG: aau:AAur_pTC20138 branched-chain amino acid ABC transporter; ABC transporter substrate-binding protein 3460228..3461652 Pseudonocardia dioxanivorans CB1190 10365077 YP_004333286.1 CDS Psed_3241 NC_015312.1 3461736 3463265 D PFAM: Amidase; KEGG: rha:RHA1_ro00359 amidase; amidase 3461736..3463265 Pseudonocardia dioxanivorans CB1190 10365078 YP_004333287.1 CDS Psed_3242 NC_015312.1 3463262 3463945 D KEGG: aau:AAur_pTC20147 cobalt-containing nitrile hydratase beta subunit; nitrile hydratase 3463262..3463945 Pseudonocardia dioxanivorans CB1190 10365079 YP_004333288.1 CDS Psed_3243 NC_015312.1 3463957 3464565 D TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 3463957..3464565 Pseudonocardia dioxanivorans CB1190 10365080 YP_004333289.1 CDS Psed_3244 NC_015312.1 3464562 3464969 D KEGG: aau:AAur_pTC20145 nitrile hydratase b-subunit; nitrile hydratase b-subunit 3464562..3464969 Pseudonocardia dioxanivorans CB1190 10365081 YP_004333290.1 CDS Psed_3245 NC_015312.1 3465648 3468665 R KEGG: tcu:Tcur_0744 ATPase-like protein; ATPase-like protein complement(3465648..3468665) Pseudonocardia dioxanivorans CB1190 10365082 YP_004333291.1 CDS Psed_3246 NC_015312.1 3468687 3469766 R PFAM: Methyltransferase type 12; KEGG: htu:Htur_1034 methyltransferase type 12; type 12 methyltransferase complement(3468687..3469766) Pseudonocardia dioxanivorans CB1190 10365083 YP_004333292.1 CDS Psed_3247 NC_015312.1 3469882 3470169 D hypothetical protein 3469882..3470169 Pseudonocardia dioxanivorans CB1190 10365084 YP_004333293.1 CDS Psed_3248 NC_015312.1 3470166 3471635 D PFAM: Amidase; KEGG: dbr:Deba_2444 amidase; amidase 3470166..3471635 Pseudonocardia dioxanivorans CB1190 10365085 YP_004333294.1 CDS Psed_3249 NC_015312.1 3471814 3472581 R KEGG: cai:Caci_3872 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(3471814..3472581) Pseudonocardia dioxanivorans CB1190 10365086 YP_004333295.1 CDS Psed_3250 NC_015312.1 3472578 3474239 R PFAM: Integrase, catalytic core; KEGG: cai:Caci_3873 integrase catalytic region; integrase catalytic subunit complement(3472578..3474239) Pseudonocardia dioxanivorans CB1190 10365087 YP_004333296.1 CDS Psed_3252 NC_015312.1 3475009 3476220 R PFAM: Monooxygenase, FAD-binding; KEGG: sna:Snas_4581 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein complement(3475009..3476220) Pseudonocardia dioxanivorans CB1190 10365089 YP_004333297.1 CDS Psed_3253 NC_015312.1 3476217 3476837 R PFAM: Transcription regulator PadR N-terminal-like; KEGG: fri:FraEuI1c_3813 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator complement(3476217..3476837) Pseudonocardia dioxanivorans CB1190 10365090 YP_004333298.1 CDS Psed_3254 NC_015312.1 3477411 3477764 R KEGG: ami:Amir_1576 hypothetical protein; hypothetical protein complement(3477411..3477764) Pseudonocardia dioxanivorans CB1190 10365091 YP_004333299.1 CDS Psed_3256 NC_015312.1 3478687 3478968 R KEGG: vcn:VOLCADRAFT_89522 hypothetical protein; hypothetical protein complement(3478687..3478968) Pseudonocardia dioxanivorans CB1190 10365093 YP_004333300.1 CDS Psed_3257 NC_015312.1 3479231 3480019 R KEGG: ade:Adeh_1681 PE-PGRS family protein; PE-PGRS family protein complement(3479231..3480019) Pseudonocardia dioxanivorans CB1190 10365094 YP_004333301.1 CDS Psed_3258 NC_015312.1 3480057 3480491 R KEGG: nml:Namu_3635 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(3480057..3480491) Pseudonocardia dioxanivorans CB1190 10365095 YP_004333302.1 CDS Psed_3259 NC_015312.1 3480600 3480884 D hypothetical protein 3480600..3480884 Pseudonocardia dioxanivorans CB1190 10365096 YP_004333303.1 CDS Psed_3260 NC_015312.1 3480960 3481862 D KEGG: nml:Namu_3637 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 3480960..3481862 Pseudonocardia dioxanivorans CB1190 10365097 YP_004333304.1 CDS Psed_3261 NC_015312.1 3481859 3482281 D PFAM: Protein of unknown function DUF488; KEGG: nfa:nfa31460 hypothetical protein; hypothetical protein 3481859..3482281 Pseudonocardia dioxanivorans CB1190 10365098 YP_004333305.1 CDS Psed_3262 NC_015312.1 3482351 3483067 R KEGG: sro:Sros_7232 hypothetical protein; hypothetical protein complement(3482351..3483067) Pseudonocardia dioxanivorans CB1190 10365099 YP_004333306.1 CDS Psed_3263 NC_015312.1 3483310 3484053 D KEGG: amd:AMED_4650 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 3483310..3484053 Pseudonocardia dioxanivorans CB1190 10365100 YP_004333307.1 CDS Psed_3264 NC_015312.1 3484063 3484185 R hypothetical protein complement(3484063..3484185) Pseudonocardia dioxanivorans CB1190 10365101 YP_004333308.1 CDS Psed_3265 NC_015312.1 3484182 3485393 R PFAM: Cytochrome P450; KEGG: bbt:BBta_0729 cytochrome P450; cytochrome P450 complement(3484182..3485393) Pseudonocardia dioxanivorans CB1190 10365102 YP_004333309.1 CDS Psed_3266 NC_015312.1 3485592 3487982 R PFAM: ABC transporter-like; KEGG: req:REQ_24000 excinuclease abc subunit a UvrA1; ABC transporter complement(3485592..3487982) Pseudonocardia dioxanivorans CB1190 10365103 YP_004333310.1 CDS Psed_3267 NC_015312.1 3488083 3488499 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rer:RER_49610 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3488083..3488499) Pseudonocardia dioxanivorans CB1190 10365104 YP_004333311.1 CDS Psed_3268 NC_015312.1 3488496 3488948 R KEGG: nfa:nfa43930 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(3488496..3488948) Pseudonocardia dioxanivorans CB1190 10365105 YP_004333312.1 CDS Psed_3269 NC_015312.1 3489013 3489267 R KEGG: amd:AMED_5874 hypothetical protein; hypothetical protein complement(3489013..3489267) Pseudonocardia dioxanivorans CB1190 10365106 YP_004333313.1 CDS Psed_3270 NC_015312.1 3489347 3489832 R KEGG: mjl:Mjls_2787 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin complement(3489347..3489832) Pseudonocardia dioxanivorans CB1190 10365107 YP_004333314.1 CDS Psed_3271 NC_015312.1 3489952 3490149 R PFAM: BFD-like [2Fe-2S]-binding domain; KEGG: sna:Snas_5033 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein; BFD (2Fe-2S)-binding domain-containing protein complement(3489952..3490149) Pseudonocardia dioxanivorans CB1190 10365108 YP_004333315.1 CDS Psed_3272 NC_015312.1 3490183 3492168 D KEGG: amd:AMED_3255 ATP-dependent DNA ligase; TIGRFAM: DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain; PFAM: DNA primase, small subunit; DNA ligase, ATP-dependent, central; DNA polymerase LigD, polymerase domain-containing protein 3490183..3492168 Pseudonocardia dioxanivorans CB1190 10365109 YP_004333316.1 CDS Psed_3273 NC_015312.1 3492195 3493004 D PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: ami:Amir_3412 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3492195..3493004 Pseudonocardia dioxanivorans CB1190 10365110 YP_004333317.1 CDS Psed_3274 NC_015312.1 3493045 3494385 D PFAM: Major facilitator superfamily MFS-1; KEGG: nml:Namu_0574 major facilitator superfamily protein; major facilitator superfamily protein 3493045..3494385 Pseudonocardia dioxanivorans CB1190 10365111 YP_004333318.1 CDS Psed_3275 NC_015312.1 3494655 3494996 D KEGG: sen:SACE_2290 hypothetical protein; hypothetical protein 3494655..3494996 Pseudonocardia dioxanivorans CB1190 10365112 YP_004333319.1 CDS Psed_3276 NC_015312.1 3495097 3495855 R KEGG: svi:Svir_21780 glycosyl transferase; PFAM: Glycosyl transferase, family 2; dolichyl-phosphate beta-D-mannosyltransferase complement(3495097..3495855) Pseudonocardia dioxanivorans CB1190 10365113 YP_004333320.1 CDS Psed_3277 NC_015312.1 3495848 3497497 R TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: nfa:nfa31180 polyprenol phosphate mannosyl transferase 2; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(3495848..3497497) Pseudonocardia dioxanivorans CB1190 10365114 YP_004333321.1 CDS Psed_3278 NC_015312.1 3497539 3498345 R PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: req:REQ_37880 gpi deacetylase; LmbE family protein complement(3497539..3498345) Pseudonocardia dioxanivorans CB1190 10365115 YP_004333322.1 CDS Psed_3279 NC_015312.1 3498546 3500057 R PFAM: Amidohydrolase 3; KEGG: svi:Svir_21800 predicted TIM-barrel fold metal-dependent hydrolase; amidohydrolase complement(3498546..3500057) Pseudonocardia dioxanivorans CB1190 10365116 YP_004333323.1 CDS Psed_3280 NC_015312.1 3500223 3500414 R PFAM: Phage shock domain; KEGG: ami:Amir_3401 phage shock protein C, PspC; PspC domain-containing protein complement(3500223..3500414) Pseudonocardia dioxanivorans CB1190 10365117 YP_004333324.1 CDS Psed_3281 NC_015312.1 3500475 3501695 D KEGG: ami:Amir_2701 hypothetical protein; hypothetical protein 3500475..3501695 Pseudonocardia dioxanivorans CB1190 10365118 YP_004333325.1 CDS Psed_3282 NC_015312.1 3501731 3502861 R PFAM: Peptidase M24, structural domain; Creatinase; KEGG: amd:AMED_4873 X-Pro dipeptidase; peptidase M24 complement(3501731..3502861) Pseudonocardia dioxanivorans CB1190 10365119 YP_004333326.1 CDS Psed_3283 NC_015312.1 3503099 3504037 D KEGG: ami:Amir_2257 5'-3' exonuclease; PFAM: 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 5'-3' exonuclease 3503099..3504037 Pseudonocardia dioxanivorans CB1190 10365120 YP_004333327.1 CDS Psed_3284 NC_015312.1 3504373 3506424 R KEGG: clu:CLUG_01018 hypothetical protein; hypothetical protein complement(3504373..3506424) Pseudonocardia dioxanivorans CB1190 10365121 YP_004333328.1 CDS Psed_3285 NC_015312.1 3506619 3509393 R KEGG: sen:SACE_2265 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DSH, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein complement(3506619..3509393) Pseudonocardia dioxanivorans CB1190 10365122 YP_004333329.1 CDS Psed_3286 NC_015312.1 3509485 3510465 R KEGG: req:REQ_23350 twin-arginine translocation protein TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC complement(3509485..3510465) Pseudonocardia dioxanivorans CB1190 10365123 YP_004333330.1 CDS Psed_3287 NC_015312.1 3510475 3510756 R TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: sen:SACE_2262 hypothetical protein; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; Sec-independent protein translocase tatA/E-like protein complement(3510475..3510756) Pseudonocardia dioxanivorans CB1190 10365124 YP_004333331.1 CDS Psed_3288 NC_015312.1 3510837 3511037 R hypothetical protein complement(3510837..3511037) Pseudonocardia dioxanivorans CB1190 10365125 YP_004333332.1 CDS Psed_3289 NC_015312.1 3511037 3512005 R KEGG: ami:Amir_2250 transcriptional regulator protein; transcriptional regulator protein complement(3511037..3512005) Pseudonocardia dioxanivorans CB1190 10365126 YP_004333333.1 CDS Psed_3290 NC_015312.1 3512019 3513059 R KEGG: ami:Amir_2249 transcriptional regulator protein; transcriptional regulator protein complement(3512019..3513059) Pseudonocardia dioxanivorans CB1190 10365127 YP_004333334.1 CDS Psed_3291 NC_015312.1 3513242 3513487 D KEGG: amd:AMED_4323 hypothetical protein; hypothetical protein 3513242..3513487 Pseudonocardia dioxanivorans CB1190 10365128 YP_004333335.1 CDS Psed_3292 NC_015312.1 3513513 3513878 R PFAM: Protein of unknown function DUF1304; KEGG: ami:Amir_1705 protein of unknown function DUF1304; hypothetical protein complement(3513513..3513878) Pseudonocardia dioxanivorans CB1190 10365129 YP_004333336.1 CDS Psed_3293 NC_015312.1 3513990 3515351 R KEGG: ami:Amir_2247 protein of unknown function DUF245 domain protein; TIGRFAM: Pup ligase; PFAM: Pup ligase/deamidase; proteasome accessory factor PafA complement(3513990..3515351) Pseudonocardia dioxanivorans CB1190 10365130 YP_004333337.1 CDS Psed_3294 NC_015312.1 3515394 3516974 D KEGG: sen:SACE_2253 glycerophosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; Diacylglycerol kinase, catalytic domain; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; Diacylglycerol kinase, catalytic domain; phosphoesterase PA-phosphatase-like protein 3515394..3516974 Pseudonocardia dioxanivorans CB1190 10365131 YP_004333338.1 CDS Psed_3295 NC_015312.1 3516986 3518110 R KEGG: bcv:Bcav_2092 hypothetical protein; hypothetical protein complement(3516986..3518110) Pseudonocardia dioxanivorans CB1190 10365132 YP_004333339.1 CDS Psed_3296 NC_015312.1 3518184 3519134 R KEGG: nda:Ndas_4113 molybdopterin oxidoreductase Fe4s4 region; PFAM: Molybdopterin oxidoreductase, Fe4S4 domain; Ferredoxin; 4Fe-4S binding domain; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; molybdopterin oxidoreductase Fe4S4 region complement(3518184..3519134) Pseudonocardia dioxanivorans CB1190 10365133 YP_004333340.1 CDS Psed_3297 NC_015312.1 3519131 3521011 R KEGG: scb:SCAB_16891 respiratory chain oxidoreductase; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; respiratory-chain NADH dehydrogenase domain 51 kDa subunit complement(3519131..3521011) Pseudonocardia dioxanivorans CB1190 10365134 YP_004333341.1 CDS Psed_3298 NC_015312.1 3521024 3522955 R manually curated; KEGG: sma:SAV_1834 formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit); PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; nitrate reductase complement(3521024..3522955) Pseudonocardia dioxanivorans CB1190 10365135 YP_004333342.1 CDS Psed_3299 NC_015312.1 3523012 3523908 R KEGG: fri:FraEuI1c_5975 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; molybdopterin-guanine dinucleotide biosynthesis protein A-like protein complement(3523012..3523908) Pseudonocardia dioxanivorans CB1190 10365136 YP_004333343.1 CDS Psed_3300 NC_015312.1 3524149 3524976 D TIGRFAM: Formate dehydrogenase, subunit FdhD; HAMAP: Formate dehydrogenase, subunit FdhD; KEGG: amd:AMED_6733 FdhD protein; PFAM: Formate dehydrogenase, subunit FdhD; protein fdhD 3524149..3524976 Pseudonocardia dioxanivorans CB1190 10365137 YP_004333344.1 CDS Psed_3301 NC_015312.1 3524973 3525344 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sro:Sros_0848 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3524973..3525344 Pseudonocardia dioxanivorans CB1190 10365138 YP_004333345.1 CDS Psed_3302 NC_015312.1 3525493 3525861 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sen:SACE_0780 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3525493..3525861) Pseudonocardia dioxanivorans CB1190 10365139 YP_004333346.1 CDS Psed_3303 NC_015312.1 3525912 3526715 R KEGG: req:REQ_23290 20S proteasome alpha subunit prca; TIGRFAM: Proteasome, alpha subunit; PFAM: Proteasome, subunit alpha/beta; proteasome subunit alpha complement(3525912..3526715) Pseudonocardia dioxanivorans CB1190 10365140 YP_004333347.1 CDS Psed_3304 NC_015312.1 3526810 3527673 R KEGG: ami:Amir_2241 20S proteasome A and B subunits; TIGRFAM: Peptidase T1A, proteasome beta-subunit, actinobacteria; PFAM: Proteasome, subunit alpha/beta; proteasome subunit beta complement(3526810..3527673) Pseudonocardia dioxanivorans CB1190 10365141 YP_004333348.1 CDS Psed_3305 NC_015312.1 3527873 3528070 R TIGRFAM: Ubiquitin-like, Pup; HAMAP: Ubiquitin-like, Pup; KEGG: mmi:MMAR_3086 hypothetical protein; PFAM: Ubiquitin-like, Pup; ubiquitin-like protein pup complement(3527873..3528070) Pseudonocardia dioxanivorans CB1190 10365142 YP_004333349.1 CDS Psed_3306 NC_015312.1 3528245 3529744 R KEGG: ami:Amir_2239 protein of unknown function DUF245 domain protein; TIGRFAM: Pup deamidase; PFAM: Pup ligase/deamidase; proteasome accessory factor PafA2 complement(3528245..3529744) Pseudonocardia dioxanivorans CB1190 10365143 YP_004333350.1 CDS Psed_3307 NC_015312.1 3529870 3530436 D PFAM: NUDIX hydrolase domain; KEGG: req:REQ_23220 NUDIX superfamily hydrolase; NUDIX hydrolase 3529870..3530436 Pseudonocardia dioxanivorans CB1190 10365144 YP_004333351.1 CDS Psed_3308 NC_015312.1 3530426 3531835 R TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: kfl:Kfla_3571 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase complement(3530426..3531835) Pseudonocardia dioxanivorans CB1190 10365145 YP_004333352.1 CDS Psed_3309 NC_015312.1 3531926 3532471 R KEGG: kra:Krad_2941 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(3531926..3532471) Pseudonocardia dioxanivorans CB1190 10365146 YP_004333353.1 CDS Psed_3310 NC_015312.1 3532561 3533121 D KEGG: gob:Gobs_1264 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein 3532561..3533121 Pseudonocardia dioxanivorans CB1190 10365147 YP_004333354.1 CDS Psed_3311 NC_015312.1 3533284 3534144 R KEGG: mbt:JTY_1080 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR complement(3533284..3534144) Pseudonocardia dioxanivorans CB1190 10365148 YP_004333355.1 CDS Psed_3312 NC_015312.1 3534230 3534643 R KEGG: mab:MAB_0479 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(3534230..3534643) Pseudonocardia dioxanivorans CB1190 10365149 YP_004333356.1 CDS Psed_3313 NC_015312.1 3535017 3536081 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein 3535017..3536081 Pseudonocardia dioxanivorans CB1190 10365150 YP_004333357.1 CDS Psed_3314 NC_015312.1 3536096 3536809 D SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: msm:MSMEG_5911 AraC family protein transcriptional regulator; AraC family transcriptional regulator 3536096..3536809 Pseudonocardia dioxanivorans CB1190 10365151 YP_004333358.1 CDS Psed_3315 NC_015312.1 3536894 3537304 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL5706 quinone binding protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3536894..3537304) Pseudonocardia dioxanivorans CB1190 10365152 YP_004333359.1 CDS Psed_3316 NC_015312.1 3537375 3540170 D KEGG: fri:FraEuI1c_4888 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; ATPase, AAA+ type, core; LuxR family transcriptional regulator 3537375..3540170 Pseudonocardia dioxanivorans CB1190 10365153 YP_004333360.1 CDS Psed_3317 NC_015312.1 3540273 3540758 D KEGG: nml:Namu_0325 hypothetical protein; hypothetical protein 3540273..3540758 Pseudonocardia dioxanivorans CB1190 10365154 YP_004333361.1 CDS Psed_3318 NC_015312.1 3540755 3541285 D KEGG: sro:Sros_0172 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein 3540755..3541285 Pseudonocardia dioxanivorans CB1190 10365155 YP_004333362.1 CDS Psed_3319 NC_015312.1 3541368 3543182 R TIGRFAM: Proteasome ATPase; PFAM: ATPase, AAA-type, core; KEGG: svi:Svir_22080 ATP-dependent 26S proteasome regulatory subunit; SMART: ATPase, AAA+ type, core; proteasome ATPase complement(3541368..3543182) Pseudonocardia dioxanivorans CB1190 10365156 YP_004333363.1 CDS Psed_3320 NC_015312.1 3543345 3544277 R KEGG: svi:Svir_22120 tRNA (adenine-58-N(1)-) methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit; tRNA (adenine-N(1)-)-methyltransferase complement(3543345..3544277) Pseudonocardia dioxanivorans CB1190 10365157 YP_004333364.1 CDS Psed_3321 NC_015312.1 3544412 3545527 D KEGG: sen:SACE_2242 RecB family exonuclease; RecB family exonuclease 3544412..3545527 Pseudonocardia dioxanivorans CB1190 10365158 YP_004333365.1 CDS Psed_3322 NC_015312.1 3545760 3546584 D KEGG: amd:AMED_4912 hypothetical protein; hypothetical protein 3545760..3546584 Pseudonocardia dioxanivorans CB1190 10365159 YP_004333366.1 CDS Psed_3323 NC_015312.1 3546609 3547493 R PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: mav:MAV_2393 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase complement(3546609..3547493) Pseudonocardia dioxanivorans CB1190 10365160 YP_004333367.1 CDS Psed_3324 NC_015312.1 3547544 3547807 R KEGG: nml:Namu_2980 phosphoribosyl-ATP diphosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase complement(3547544..3547807) Pseudonocardia dioxanivorans CB1190 10365161 YP_004333368.1 CDS Psed_3325 NC_015312.1 3547957 3548658 R KEGG: ami:Amir_2212 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(3547957..3548658) Pseudonocardia dioxanivorans CB1190 10365162 YP_004333369.1 CDS Psed_3326 NC_015312.1 3548648 3552220 R TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: ami:Amir_2211 methionine synthase; PFAM: Homocysteine S-methyltransferase; Pterin-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12-dependent methionine synthase, activation domain; methionine synthase complement(3548648..3552220) Pseudonocardia dioxanivorans CB1190 10365163 YP_004333370.1 CDS Psed_3327 NC_015312.1 3552288 3553184 D KEGG: ami:Amir_2210 protein of unknown function DUF75; hypothetical protein 3552288..3553184 Pseudonocardia dioxanivorans CB1190 10365164 YP_004333371.1 CDS Psed_3328 NC_015312.1 3553319 3554422 D KEGG: rer:RER_31910 MFS transporter; manually curated; PFAM: Major facilitator superfamily MFS-1; major facilitator superfamily protein 3553319..3554422 Pseudonocardia dioxanivorans CB1190 10365165 YP_004333372.1 CDS Psed_3329 NC_015312.1 3554429 3554788 R PFAM: Protein of unknown function DUF2237; KEGG: mep:MPQ_0170 hypothetical protein; hypothetical protein complement(3554429..3554788) Pseudonocardia dioxanivorans CB1190 10365166 YP_004333373.1 CDS Psed_3330 NC_015312.1 3554798 3556036 R TIGRFAM: Mycothiol biosynthesis protein, MshC; KEGG: amd:AMED_4930 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase complement(3554798..3556036) Pseudonocardia dioxanivorans CB1190 10365167 YP_004333374.1 CDS Psed_3331 NC_015312.1 3556111 3556314 R hypothetical protein complement(3556111..3556314) Pseudonocardia dioxanivorans CB1190 10365168 YP_004333375.1 CDS Psed_3332 NC_015312.1 3556311 3557525 R PFAM: Major facilitator superfamily MFS-1; KEGG: sna:Snas_1047 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3556311..3557525) Pseudonocardia dioxanivorans CB1190 10365169 YP_004333376.1 CDS Psed_3333 NC_015312.1 3557722 3559758 D KEGG: tbi:Tbis_0296 NLP/P60 protein; hypothetical protein 3557722..3559758 Pseudonocardia dioxanivorans CB1190 10365170 YP_004333377.1 CDS Psed_3334 NC_015312.1 3559852 3561837 R KEGG: nml:Namu_0550 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A complement(3559852..3561837) Pseudonocardia dioxanivorans CB1190 10365171 YP_004333378.1 CDS Psed_3335 NC_015312.1 3561830 3563230 R KEGG: nml:Namu_0551 Mg-chelatase subunit ChlI-like protein; Mg-chelatase subunit ChlI-like protein complement(3561830..3563230) Pseudonocardia dioxanivorans CB1190 10365172 YP_004333379.1 CDS Psed_3336 NC_015312.1 3563383 3563922 D PFAM: Protein of unknown function DUF664; KEGG: nfa:nfa32260 hypothetical protein; hypothetical protein 3563383..3563922 Pseudonocardia dioxanivorans CB1190 10365173 YP_004333380.1 CDS Psed_3337 NC_015312.1 3564079 3564984 R PFAM: Peptidase M48; KEGG: gob:Gobs_3608 peptidase M48 Ste24p; peptidase M48 Ste24p complement(3564079..3564984) Pseudonocardia dioxanivorans CB1190 10365174 YP_004333381.1 CDS Psed_3338 NC_015312.1 3565019 3565360 R KEGG: sna:Snas_4544 transcriptional repressor, CopY family; manually curated; PFAM: Penicillinase repressor; CopY family transcriptional regulator complement(3565019..3565360) Pseudonocardia dioxanivorans CB1190 10365175 YP_004333382.1 CDS Psed_3339 NC_015312.1 3565478 3566284 R PFAM: YkuD domain; KEGG: amd:AMED_4234 secreted protein; ErfK/YbiS/YcfS/YnhG family protein complement(3565478..3566284) Pseudonocardia dioxanivorans CB1190 10365176 YP_004333383.1 CDS Psed_3340 NC_015312.1 3566536 3568041 D KEGG: gob:Gobs_1801 EmrB/QacA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 3566536..3568041 Pseudonocardia dioxanivorans CB1190 10365177 YP_004333384.1 CDS Psed_3341 NC_015312.1 3568052 3568885 R TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: rha:RHA1_ro02439 hypothetical protein; F420-dependent oxidoreductase complement(3568052..3568885) Pseudonocardia dioxanivorans CB1190 10365178 YP_004333385.1 CDS Psed_3342 NC_015312.1 3568995 3570524 D PFAM: Amine oxidase; KEGG: mil:ML5_2707 amine oxidase; amine oxidase 3568995..3570524 Pseudonocardia dioxanivorans CB1190 10365179 YP_004333386.1 CDS Psed_3343 NC_015312.1 3570744 3572252 D KEGG: tbi:Tbis_2237 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase, family A, palm domain; SMART: DNA-directed DNA polymerase, family A, palm domain; DNA-directed DNA polymerase 3570744..3572252 Pseudonocardia dioxanivorans CB1190 10365180 YP_004333387.1 CDS Psed_3344 NC_015312.1 3572287 3573204 R PFAM: Lipase, GDSL; KEGG: mau:Micau_2607 hypothetical protein; G-D-S-L family lipolytic protein complement(3572287..3573204) Pseudonocardia dioxanivorans CB1190 10365181 YP_004333388.1 CDS Psed_3345 NC_015312.1 3573316 3574515 R TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; HAMAP: S-adenosylmethionine decarboxylase proenzyme; KEGG: nfa:nfa37860 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; Spermine synthase; S-adenosylmethionine decarboxylase complement(3573316..3574515) Pseudonocardia dioxanivorans CB1190 10365182 YP_004333389.1 CDS Psed_3346 NC_015312.1 3574685 3575809 R KEGG: ami:Amir_5654 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; Ornithine decarboxylase complement(3574685..3575809) Pseudonocardia dioxanivorans CB1190 10365183 YP_004333390.1 CDS Psed_3347 NC_015312.1 3575860 3576333 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: fri:FraEuI1c_2912 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 3575860..3576333 Pseudonocardia dioxanivorans CB1190 10365184 YP_004333391.1 CDS Psed_3348 NC_015312.1 3576346 3577395 R PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: pla:Plav_0925 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase complement(3576346..3577395) Pseudonocardia dioxanivorans CB1190 10365185 YP_004333392.1 CDS Psed_3349 NC_015312.1 3577392 3578579 R PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: msp:Mspyr1_45870 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(3577392..3578579) Pseudonocardia dioxanivorans CB1190 10365186 YP_004333393.1 CDS Psed_3350 NC_015312.1 3578685 3580154 D KEGG: svi:Svir_30180 succinate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase 3578685..3580154 Pseudonocardia dioxanivorans CB1190 10365187 YP_004333394.1 CDS Psed_3351 NC_015312.1 3580304 3581023 D PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: sen:SACE_3840 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 3580304..3581023 Pseudonocardia dioxanivorans CB1190 10365188 YP_004333395.1 CDS Psed_3352 NC_015312.1 3581020 3581382 D KEGG: msm:MSMEG_2608 cobalt transport protein CbiM; cobalt transport protein CbiM 3581020..3581382 Pseudonocardia dioxanivorans CB1190 10365189 YP_004333396.1 CDS Psed_3353 NC_015312.1 3581382 3582146 D KEGG: sen:SACE_3838 cobalt ABC transporter permease; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 3581382..3582146 Pseudonocardia dioxanivorans CB1190 10365190 YP_004333397.1 CDS Psed_3354 NC_015312.1 3582143 3582874 D SMART: ATPase, AAA+ type, core; TIGRFAM: Cobalt transport protein ATP-binding subunit; KEGG: sen:SACE_3837 cobalt ABC transporter ATP binding protein; PFAM: ABC transporter-like; cobalt ABC transporter ATPase 3582143..3582874 Pseudonocardia dioxanivorans CB1190 10365191 YP_004333398.1 CDS Psed_3355 NC_015312.1 3582890 3584293 R KEGG: amd:AMED_4669 band 7 domain-containing protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein complement(3582890..3584293) Pseudonocardia dioxanivorans CB1190 10365192 YP_004333399.1 CDS Psed_3356 NC_015312.1 3584357 3584794 R PFAM: Nodulation efficiency, NfeD; KEGG: sen:SACE_3782 membrane protein implicated in regulation of membrane protease activity; hypothetical protein complement(3584357..3584794) Pseudonocardia dioxanivorans CB1190 10365193 YP_004333400.1 CDS Psed_3357 NC_015312.1 3584815 3585681 R KEGG: sen:SACE_3783 hypothetical protein; hypothetical protein complement(3584815..3585681) Pseudonocardia dioxanivorans CB1190 10365194 YP_004333401.1 CDS Psed_3358 NC_015312.1 3585813 3586610 D KEGG: svi:Svir_22310 hypothetical protein; hypothetical protein 3585813..3586610 Pseudonocardia dioxanivorans CB1190 10365195 YP_004333402.1 CDS Psed_3359 NC_015312.1 3586614 3588452 R KEGG: tbi:Tbis_2516 transcriptional regulator CdaR; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR complement(3586614..3588452) Pseudonocardia dioxanivorans CB1190 10365196 YP_004333403.1 CDS Psed_3360 NC_015312.1 3588557 3589648 R PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_1793 alkanal monooxygenase; luciferase-like protein complement(3588557..3589648) Pseudonocardia dioxanivorans CB1190 10365197 YP_004333404.1 CDS Psed_3361 NC_015312.1 3589701 3590417 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gbr:Gbro_1699 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(3589701..3590417) Pseudonocardia dioxanivorans CB1190 10365198 YP_004333405.1 CDS Psed_3362 NC_015312.1 3590414 3591214 R PFAM: Alpha/beta hydrolase fold-1; KEGG: tbi:Tbis_2523 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(3590414..3591214) Pseudonocardia dioxanivorans CB1190 10365199 YP_004333406.1 CDS Psed_3363 NC_015312.1 3591217 3592845 R KEGG: tbi:Tbis_2515 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(3591217..3592845) Pseudonocardia dioxanivorans CB1190 10365200 YP_004333407.1 CDS Psed_3364 NC_015312.1 3592880 3593917 R PFAM: Luciferase-like, subgroup; KEGG: tbi:Tbis_2521 luciferase-like monooxygenase; luciferase-like protein complement(3592880..3593917) Pseudonocardia dioxanivorans CB1190 10365201 YP_004333408.1 CDS Psed_3365 NC_015312.1 3594057 3595157 R PFAM: Aminoglycoside phosphotransferase; KEGG: tbi:Tbis_2519 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(3594057..3595157) Pseudonocardia dioxanivorans CB1190 10365202 YP_004333409.1 CDS Psed_3366 NC_015312.1 3595154 3596443 R KEGG: tbi:Tbis_2518 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; (R)-benzylsuccinyl-CoA dehydrogenase complement(3595154..3596443) Pseudonocardia dioxanivorans CB1190 10365203 YP_004333410.1 CDS Psed_3367 NC_015312.1 3596544 3597524 R KEGG: kfl:Kfla_3382 response regulator receiver; response regulator receiver complement(3596544..3597524) Pseudonocardia dioxanivorans CB1190 10365204 YP_004333411.1 CDS Psed_3368 NC_015312.1 3597805 3599082 D PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: kfl:Kfla_3384 integrase protein; integrase protein 3597805..3599082 Pseudonocardia dioxanivorans CB1190 10365205 YP_004333412.1 CDS Psed_3369 NC_015312.1 3599121 3600155 R PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: ami:Amir_2182 ferrochelatase; ferrochelatase complement(3599121..3600155) Pseudonocardia dioxanivorans CB1190 10365206 YP_004333413.1 CDS Psed_3370 NC_015312.1 3600163 3600939 R KEGG: sen:SACE_3786 enoyl-(acyl carrier protein) reductase; enoyl-ACP reductase complement(3600163..3600939) Pseudonocardia dioxanivorans CB1190 10365207 YP_004333414.1 CDS Psed_3371 NC_015312.1 3600972 3601670 R SMART: Polyketide synthase/Fatty acid synthase, KR; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: gob:Gobs_2104 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(3600972..3601670) Pseudonocardia dioxanivorans CB1190 10365208 YP_004333415.1 CDS Psed_3372 NC_015312.1 3601726 3602709 R KEGG: rer:RER_30730 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A complement(3601726..3602709) Pseudonocardia dioxanivorans CB1190 10365209 YP_004333416.1 CDS Psed_3373 NC_015312.1 3602706 3603683 R PFAM: Domain of unknown function DUF58; KEGG: ami:Amir_2146 protein of unknown function DUF58; hypothetical protein complement(3602706..3603683) Pseudonocardia dioxanivorans CB1190 10365210 YP_004333417.1 CDS Psed_3374 NC_015312.1 3603693 3604769 R PFAM: ATPase, AAA-3; KEGG: amd:AMED_4951 MoxR-like ATPase; ATPase complement(3603693..3604769) Pseudonocardia dioxanivorans CB1190 10365211 YP_004333418.1 CDS Psed_3375 NC_015312.1 3604813 3606129 R PFAM: NLP/P60; KEGG: amd:AMED_4954 hypothetical protein; NLP/P60 protein complement(3604813..3606129) Pseudonocardia dioxanivorans CB1190 10365212 YP_004333419.1 CDS Psed_3376 NC_015312.1 3606397 3607998 D KEGG: nml:Namu_2294 hypothetical protein; hypothetical protein 3606397..3607998 Pseudonocardia dioxanivorans CB1190 10365213 YP_004333420.1 CDS Psed_3377 NC_015312.1 3608203 3611022 D TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: amd:AMED_4955 aconitate hydratase 1; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; aconitate hydratase 1 3608203..3611022 Pseudonocardia dioxanivorans CB1190 10365214 YP_004333421.1 CDS Psed_3378 NC_015312.1 3611864 3612973 R PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: rop:ROP_26550 glycine cleavage system aminomethyltransferase T; glycine cleavage system protein T complement(3611864..3612973) Pseudonocardia dioxanivorans CB1190 10365215 YP_004333422.1 CDS Psed_3379 NC_015312.1 3613096 3613572 R PFAM: Cupin 2, conserved barrel; KEGG: ret:RHE_CH03368 hypothetical protein; cupin complement(3613096..3613572) Pseudonocardia dioxanivorans CB1190 10365216 YP_004333423.1 CDS Psed_3380 NC_015312.1 3613669 3614661 R KEGG: nfa:nfa48840 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260; methyltransferase complement(3613669..3614661) Pseudonocardia dioxanivorans CB1190 10365217 YP_004333424.1 CDS Psed_3381 NC_015312.1 3614669 3615484 R TIGRFAM: Conserved hypothetical protein CHP03442; KEGG: mil:ML5_4985 hypothetical protein; hypothetical protein complement(3614669..3615484) Pseudonocardia dioxanivorans CB1190 10365218 YP_004333425.1 CDS Psed_3382 NC_015312.1 3615489 3616895 R KEGG: ami:Amir_2123 protein of unknown function DUF323; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor; hypothetical protein complement(3615489..3616895) Pseudonocardia dioxanivorans CB1190 10365219 YP_004333426.1 CDS Psed_3383 NC_015312.1 3616892 3618259 R manually curated; TIGRFAM: Glutamate--cysteine ligase, GsaH-related; KEGG: sen:SACE_3826 glutamate-cysteine ligase; PFAM: Glutamate--cysteine ligase, GCS2; glutamate/cysteine ligase protein complement(3616892..3618259) Pseudonocardia dioxanivorans CB1190 10365220 YP_004333427.1 CDS Psed_3384 NC_015312.1 3618380 3618982 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_2120 transcriptional regulator, TetR family; TetR family transcriptional regulator 3618380..3618982 Pseudonocardia dioxanivorans CB1190 10365221 YP_004333428.1 CDS Psed_3385 NC_015312.1 3619156 3620598 R KEGG: kfl:Kfla_0168 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter complement(3619156..3620598) Pseudonocardia dioxanivorans CB1190 10365222 YP_004333429.1 CDS Psed_3386 NC_015312.1 3620850 3621686 R PFAM: Crotonase, core; KEGG: ami:Amir_5132 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase complement(3620850..3621686) Pseudonocardia dioxanivorans CB1190 10365223 YP_004333430.1 CDS Psed_3387 NC_015312.1 3621842 3622051 R KEGG: ami:Amir_5133 transcriptional regulator; transcriptional regulator complement(3621842..3622051) Pseudonocardia dioxanivorans CB1190 10365224 YP_004333431.1 CDS Psed_3388 NC_015312.1 3622290 3623915 R KEGG: sen:SACE_2187 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(3622290..3623915) Pseudonocardia dioxanivorans CB1190 10365225 YP_004333432.1 CDS Psed_3389 NC_015312.1 3624102 3624908 D KEGG: nfa:nfa34890 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; carbonyl reductase 3624102..3624908 Pseudonocardia dioxanivorans CB1190 10365226 YP_004333433.1 CDS Psed_3391 NC_015312.1 3626240 3626689 D PFAM: UspA; KEGG: amd:AMED_1572 universal stress protein; UspA domain-containing protein 3626240..3626689 Pseudonocardia dioxanivorans CB1190 10365228 YP_004333434.1 CDS Psed_3392 NC_015312.1 3626697 3627644 D PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: kfl:Kfla_0317 adenylate/guanylate cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; guanylate cyclase 3626697..3627644 Pseudonocardia dioxanivorans CB1190 10365229 YP_004333435.1 CDS Psed_3393 NC_015312.1 3627710 3628255 R PFAM: Domain of unknown function DUF59; KEGG: ami:Amir_5148 protein of unknown function DUF59; hypothetical protein complement(3627710..3628255) Pseudonocardia dioxanivorans CB1190 10365230 YP_004333436.1 CDS Psed_3394 NC_015312.1 3628252 3628710 R KEGG: ami:Amir_5149 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; NifU family SUF system FeS assembly protein complement(3628252..3628710) Pseudonocardia dioxanivorans CB1190 10365231 YP_004333437.1 CDS Psed_3395 NC_015312.1 3628710 3630029 R TIGRFAM: Cysteine desulfurase, SufS; KEGG: svi:Svir_16160 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase complement(3628710..3630029) Pseudonocardia dioxanivorans CB1190 10365232 YP_004333438.1 CDS Psed_3396 NC_015312.1 3630026 3630802 R TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: amd:AMED_2832 Fe-S cluster assembly ATP-binding protein; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC complement(3630026..3630802) Pseudonocardia dioxanivorans CB1190 10365233 YP_004333439.1 CDS Psed_3397 NC_015312.1 3630896 3632089 R KEGG: sen:SACE_2175 FeS assembly protein; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD complement(3630896..3632089) Pseudonocardia dioxanivorans CB1190 10365234 YP_004333440.1 CDS Psed_3398 NC_015312.1 3632086 3633522 R KEGG: ami:Amir_5154 FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB complement(3632086..3633522) Pseudonocardia dioxanivorans CB1190 10365235 YP_004333441.1 CDS Psed_3399 NC_015312.1 3633519 3634358 R PFAM: HTH transcriptional regulator, ArsR; KEGG: sen:SACE_2173 transcriptional regulator; ArsR family transcriptional regulator complement(3633519..3634358) Pseudonocardia dioxanivorans CB1190 10365236 YP_004333442.1 CDS Psed_3400 NC_015312.1 3634455 3636059 D KEGG: rop:ROP_69820 mannosyltransferase MptB; mannosyltransferase 3634455..3636059 Pseudonocardia dioxanivorans CB1190 10365237 YP_004333443.1 CDS Psed_3401 NC_015312.1 3636088 3637044 D PFAM: ABC transporter-like; KEGG: ami:Amir_5162 ABC transporter related; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 3636088..3637044 Pseudonocardia dioxanivorans CB1190 10365238 YP_004333444.1 CDS Psed_3402 NC_015312.1 3637092 3637877 D PFAM: ABC-2 type transporter; KEGG: ami:Amir_5163 ABC-2 type transporter; ABC transporter 3637092..3637877 Pseudonocardia dioxanivorans CB1190 10365239 YP_004333445.1 CDS Psed_3403 NC_015312.1 3637937 3638989 D PFAM: Heme A synthase/Protoheme IX farnesyltransferase; KEGG: ami:Amir_5168 cytochrome oxidase assembly; cytochrome oxidase assembly 3637937..3638989 Pseudonocardia dioxanivorans CB1190 10365240 YP_004333446.1 CDS Psed_3404 NC_015312.1 3639106 3640077 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sen:SACE_2164 quinone oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 3639106..3640077 Pseudonocardia dioxanivorans CB1190 10365241 YP_004333447.1 CDS Psed_3405 NC_015312.1 3640146 3641123 R TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: svi:Svir_15990 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase complement(3640146..3641123) Pseudonocardia dioxanivorans CB1190 10365242 YP_004333448.1 CDS Psed_3406 NC_015312.1 3641457 3643544 D SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: ami:Amir_5186 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 3641457..3643544 Pseudonocardia dioxanivorans CB1190 10365243 YP_004333449.1 CDS Psed_3407 NC_015312.1 3643582 3644694 D TIGRFAM: Transaldolase 2; HAMAP: Transaldolase; KEGG: amd:AMED_2808 transaldolase; PFAM: Transaldolase; transaldolase 3643582..3644694 Pseudonocardia dioxanivorans CB1190 10365244 YP_004333450.1 CDS Psed_3408 NC_015312.1 3644702 3646213 D KEGG: sen:SACE_2158 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 3644702..3646213 Pseudonocardia dioxanivorans CB1190 10365245 YP_004333451.1 CDS Psed_3409 NC_015312.1 3646300 3647868 D TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: sen:SACE_2157 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 3646300..3647868 Pseudonocardia dioxanivorans CB1190 10365246 YP_004333452.1 CDS Psed_3410 NC_015312.1 3647897 3648850 D KEGG: ami:Amir_5190 OpcA protein; TIGRFAM: OpcA; PFAM: Glucose-6-phosphate dehydrogenase subunit; OpcA protein 3647897..3648850 Pseudonocardia dioxanivorans CB1190 10365247 YP_004333453.1 CDS Psed_3411 NC_015312.1 3648899 3649681 D TIGRFAM: 6-phosphogluconolactonase, DevB-type; KEGG: ami:Amir_5191 6-phosphogluconolactonase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; 6-phosphogluconolactonase 3648899..3649681 Pseudonocardia dioxanivorans CB1190 10365248 YP_004333454.1 CDS Psed_3412 NC_015312.1 3649814 3650203 D KEGG: mau:Micau_2900 hypothetical protein; hypothetical protein 3649814..3650203 Pseudonocardia dioxanivorans CB1190 10365249 YP_004333455.1 CDS Psed_3413 NC_015312.1 3650586 3651824 D PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: rha:RHA1_ro02245 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 3650586..3651824 Pseudonocardia dioxanivorans CB1190 10365250 YP_004333456.1 CDS Psed_3414 NC_015312.1 3651836 3652630 R KEGG: amd:AMED_1048 hypothetical protein; hypothetical protein complement(3651836..3652630) Pseudonocardia dioxanivorans CB1190 10365251 YP_004333457.1 CDS Psed_3415 NC_015312.1 3652705 3653052 R KEGG: gob:Gobs_2051 electron transport protein; electron transport protein complement(3652705..3653052) Pseudonocardia dioxanivorans CB1190 10365252 YP_004333458.1 CDS Psed_3416 NC_015312.1 3653090 3653323 R KEGG: rha:RHA1_ro07180 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(3653090..3653323) Pseudonocardia dioxanivorans CB1190 10365253 YP_004333459.1 CDS Psed_3417 NC_015312.1 3653736 3654548 R TIGRFAM: Triosephosphate isomerase; KEGG: ami:Amir_5197 triosephosphate isomerase; PFAM: Triosephosphate isomerase; triosephosphate isomerase complement(3653736..3654548) Pseudonocardia dioxanivorans CB1190 10365254 YP_004333460.1 CDS Psed_3418 NC_015312.1 3654604 3655782 R HAMAP: Phosphoglycerate kinase; KEGG: svi:Svir_15880 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase complement(3654604..3655782) Pseudonocardia dioxanivorans CB1190 10365255 YP_004333461.1 CDS Psed_3419 NC_015312.1 3655779 3656792 R SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: sro:Sros_6038 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase complement(3655779..3656792) Pseudonocardia dioxanivorans CB1190 10365256 YP_004333462.1 CDS Psed_3420 NC_015312.1 3656913 3657896 R TIGRFAM: Sporulation regulator WhiA; HAMAP: Sporulation regulator WhiA; KEGG: svi:Svir_15810 hypothetical protein; PFAM: Sporulation regulator WhiA, C-terminal; Sporulation regulator WhiA, N-terminal; sporulation transcriptional regulator whiA complement(3656913..3657896) Pseudonocardia dioxanivorans CB1190 10365257 YP_004333463.1 CDS Psed_3421 NC_015312.1 3657981 3659093 R KEGG: sen:SACE_2140 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0052; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; hypothetical protein complement(3657981..3659093) Pseudonocardia dioxanivorans CB1190 10365258 YP_004333464.1 CDS Psed_3422 NC_015312.1 3659101 3659994 R HAMAP: ATPase, P-loop-containing; KEGG: amd:AMED_2779 P-loop ATPase; hypothetical protein complement(3659101..3659994) Pseudonocardia dioxanivorans CB1190 10365259 YP_004333465.1 CDS Psed_3423 NC_015312.1 3659991 3662219 R SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: sen:SACE_2138 nuclease subunit of the excinuclease ABC complex; HAMAP: Excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; UvrABC system protein C complement(3659991..3662219) Pseudonocardia dioxanivorans CB1190 10365260 YP_004333466.1 CDS Psed_3424 NC_015312.1 3662356 3663063 D KEGG: amd:AMED_8273 hypothetical protein; hypothetical protein 3662356..3663063 Pseudonocardia dioxanivorans CB1190 10365261 YP_004333467.1 CDS Psed_3425 NC_015312.1 3663078 3663800 R PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nda:Ndas_4869 haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase complement(3663078..3663800) Pseudonocardia dioxanivorans CB1190 10365262 YP_004333468.1 CDS Psed_3426 NC_015312.1 3664250 3665167 R PFAM: Protein of unknown function DUF2581; KEGG: amd:AMED_2775 hypothetical protein; hypothetical protein complement(3664250..3665167) Pseudonocardia dioxanivorans CB1190 10365263 YP_004333469.1 CDS Psed_3427 NC_015312.1 3665164 3665646 R TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nml:Namu_4150 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(3665164..3665646) Pseudonocardia dioxanivorans CB1190 10365264 YP_004333470.1 CDS Psed_3428 NC_015312.1 3665920 3667233 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; Riboflavin biosynthesis protein RibBA; KEGG: amd:AMED_2773 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(3665920..3667233) Pseudonocardia dioxanivorans CB1190 10365265 YP_004333471.1 CDS Psed_3429 NC_015312.1 3667230 3667862 R TIGRFAM: Lumazine-binding protein; KEGG: sgr:SGR_6090 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha complement(3667230..3667862) Pseudonocardia dioxanivorans CB1190 10365266 YP_004333472.1 CDS Psed_3430 NC_015312.1 3667863 3669020 R TIGRFAM: Riboflavin biosynthesis protein RibD; KEGG: svi:Svir_15710 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; riboflavin biosynthesis protein RibD complement(3667863..3669020) Pseudonocardia dioxanivorans CB1190 10365267 YP_004333473.1 CDS Psed_3431 NC_015312.1 3669088 3669759 R TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: svi:Svir_15700 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(3669088..3669759) Pseudonocardia dioxanivorans CB1190 10365268 YP_004333474.1 CDS Psed_3432 NC_015312.1 3669893 3671341 R PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; KEGG: sen:SACE_2114 ribosomal RNA small subunit methyltransferase; Fmu (Sun) domain-containing protein complement(3669893..3671341) Pseudonocardia dioxanivorans CB1190 10365269 YP_004333475.1 CDS Psed_3433 NC_015312.1 3671376 3672308 R PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: ami:Amir_5224 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(3671376..3672308) Pseudonocardia dioxanivorans CB1190 10365270 YP_004333476.1 CDS Psed_3434 NC_015312.1 3672308 3672856 R PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: ami:Amir_5225 peptide deformylase; peptide deformylase complement(3672308..3672856) Pseudonocardia dioxanivorans CB1190 10365271 YP_004333477.1 CDS Psed_3435 NC_015312.1 3672969 3675029 R KEGG: ami:Amir_5234 primosomal protein N' (replication factor Y) - superfamily II helicase-like protein; primosomal protein N' complement(3672969..3675029) Pseudonocardia dioxanivorans CB1190 10365272 YP_004333478.1 CDS Psed_3436 NC_015312.1 3675148 3676425 D KEGG: gob:Gobs_0948 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase; geranylgeranyl reductase 3675148..3676425 Pseudonocardia dioxanivorans CB1190 10365273 YP_004333479.1 CDS Psed_3437 NC_015312.1 3676453 3676650 R KEGG: kfl:Kfla_4685 hypothetical protein; hypothetical protein complement(3676453..3676650) Pseudonocardia dioxanivorans CB1190 10365274 YP_004333480.1 CDS Psed_3438 NC_015312.1 3676797 3677261 R PFAM: Cupin 2, conserved barrel; KEGG: gob:Gobs_3405 cupin 2 conserved barrel domain-containing protein; cupin complement(3676797..3677261) Pseudonocardia dioxanivorans CB1190 10365275 YP_004333481.1 CDS Psed_3439 NC_015312.1 3677258 3678460 R PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; KEGG: srt:Srot_2293 S-adenosylmethionine synthetase; S-adenosylmethionine synthase complement(3677258..3678460) Pseudonocardia dioxanivorans CB1190 10365276 YP_004333482.1 CDS Psed_3440 NC_015312.1 3678716 3679315 D PFAM: SH3, type 3; KEGG: cin:100181706 similar to HrTT-1-like; SH3 type 3 domain-containing protein 3678716..3679315 Pseudonocardia dioxanivorans CB1190 10365277 YP_004333483.1 CDS Psed_3442 NC_015312.1 3680116 3681282 R PFAM: Protein of unknown function DUF939; KEGG: gob:Gobs_2756 hypothetical protein; hypothetical protein complement(3680116..3681282) Pseudonocardia dioxanivorans CB1190 10365279 YP_004333484.1 CDS Psed_3443 NC_015312.1 3681894 3682499 D KEGG: nca:Noca_4824 hypothetical protein; hypothetical protein 3681894..3682499 Pseudonocardia dioxanivorans CB1190 10365280 YP_004333485.1 CDS Psed_3444 NC_015312.1 3682822 3683043 R hypothetical protein complement(3682822..3683043) Pseudonocardia dioxanivorans CB1190 10365281 YP_004333486.1 CDS Psed_3445 NC_015312.1 3683986 3685674 D KEGG: sma:SAV_7236 hypothetical protein; transcriptional regulator CdaR 3683986..3685674 Pseudonocardia dioxanivorans CB1190 10365282 YP_004333487.1 CDS Psed_3446 NC_015312.1 3685799 3686395 D PFAM: Ferritin/Dps protein; KEGG: sna:Snas_3834 ferritin Dps family protein; ferritin 3685799..3686395 Pseudonocardia dioxanivorans CB1190 10365283 YP_004333488.1 CDS Psed_3447 NC_015312.1 3686974 3687156 R hypothetical protein complement(3686974..3687156) Pseudonocardia dioxanivorans CB1190 10365284 YP_004333489.1 CDS Psed_3448 NC_015312.1 3687306 3688298 D KEGG: cce:Ccel_0633 hypothetical protein; hypothetical protein 3687306..3688298 Pseudonocardia dioxanivorans CB1190 10365285 YP_004333490.1 CDS Psed_3449 NC_015312.1 3688291 3689679 D KEGG: sma:SAV_1892 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase (ubiquinone) 3688291..3689679 Pseudonocardia dioxanivorans CB1190 10365286 YP_004333491.1 CDS Psed_3450 NC_015312.1 3689943 3690698 D hypothetical protein 3689943..3690698 Pseudonocardia dioxanivorans CB1190 10365287 YP_004333492.1 CDS Psed_3451 NC_015312.1 3690891 3691343 R PFAM: Protein of unknown function DUF1931; KEGG: nml:Namu_3580 hypothetical protein; hypothetical protein complement(3690891..3691343) Pseudonocardia dioxanivorans CB1190 10365288 YP_004333493.1 CDS Psed_3453 NC_015312.1 3692021 3692356 D KEGG: sro:Sros_4025 hypothetical protein; hypothetical protein 3692021..3692356 Pseudonocardia dioxanivorans CB1190 10365290 YP_004333494.1 CDS Psed_3455 NC_015312.1 3693046 3693309 D manually curated; KEGG: fal:FRAAL6446 hypothetical protein; hypothetical protein 3693046..3693309 Pseudonocardia dioxanivorans CB1190 10365292 YP_004333495.1 CDS Psed_3456 NC_015312.1 3693306 3695030 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Cyclic nucleotide-binding domain; KEGG: sro:Sros_4028 thioredoxin-disulfide reductase; SMART: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 3693306..3695030 Pseudonocardia dioxanivorans CB1190 10365293 YP_004333496.1 CDS Psed_3457 NC_015312.1 3695403 3696260 D KEGG: nca:Noca_2345 hypothetical protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related; polyphosphate:nucleotide phosphotransferase 3695403..3696260 Pseudonocardia dioxanivorans CB1190 10365294 YP_004333497.1 CDS Psed_3458 NC_015312.1 3696284 3696781 R KEGG: sma:SAV_7227 hypothetical protein; hypothetical protein complement(3696284..3696781) Pseudonocardia dioxanivorans CB1190 10365295 YP_004333498.1 CDS Psed_3460 NC_015312.1 3697822 3699030 R PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; manually curated; KEGG: kra:Krad_3959 formaldehyde dehydrogenase glutathione-independent; TIGRFAM: Formaldehyde dehydrogenase, glutathione-independent; formaldehyde dehydrogenase complement(3697822..3699030) Pseudonocardia dioxanivorans CB1190 10365297 YP_004333499.1 CDS Psed_3461 NC_015312.1 3699764 3700441 D KEGG: ava:Ava_C0139 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria; transport-associated protein 3699764..3700441 Pseudonocardia dioxanivorans CB1190 10365298 YP_004333500.1 CDS Psed_3462 NC_015312.1 3700520 3702409 D PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, N-terminal; Transketolase, C-terminal; KEGG: fra:Francci3_1278 transketolase; SMART: Transketolase-like, pyrimidine-binding domain; 1-deoxy-D-xylulose-5-phosphate synthase 3700520..3702409 Pseudonocardia dioxanivorans CB1190 10365299 YP_004333501.1 CDS Psed_3463 NC_015312.1 3703163 3703768 R hypothetical protein complement(3703163..3703768) Pseudonocardia dioxanivorans CB1190 10365300 YP_004333502.1 CDS Psed_3464 NC_015312.1 3703955 3704734 R KEGG: gbr:Gbro_2666 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(3703955..3704734) Pseudonocardia dioxanivorans CB1190 10365301 YP_004333503.1 CDS Psed_3467 NC_015312.1 3706557 3707552 D PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: gbr:Gbro_4728 integrase protein; integrase protein 3706557..3707552 Pseudonocardia dioxanivorans CB1190 10365303 YP_004333504.1 CDS Psed_3468 NC_015312.1 3707647 3709368 D PFAM: Integrase, catalytic core, phage; KEGG: rer:pREL1_0294 transposase; integrase protein 3707647..3709368 Pseudonocardia dioxanivorans CB1190 10365304 YP_004333505.1 CDS Psed_3470 NC_015312.1 3712621 3713742 R PFAM: Mechanosensitive ion channel MscS; KEGG: mil:ML5_4346 mscs mechanosensitive ion channel; mechanosensitive ion channel MscS complement(3712621..3713742) Pseudonocardia dioxanivorans CB1190 10365306 YP_004333506.1 CDS Psed_3471 NC_015312.1 3713906 3714082 D hypothetical protein 3713906..3714082 Pseudonocardia dioxanivorans CB1190 10365307 YP_004333507.1 CDS Psed_3472 NC_015312.1 3714253 3714711 R KEGG: svi:Svir_35080 protein of unknown function (DUF461); hypothetical protein complement(3714253..3714711) Pseudonocardia dioxanivorans CB1190 10365308 YP_004333508.1 CDS Psed_3473 NC_015312.1 3715500 3717266 R KEGG: msm:MSMEG_2280 pyruvate dehydrogenase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; pyruvate dehydrogenase complement(3715500..3717266) Pseudonocardia dioxanivorans CB1190 10365309 YP_004333509.1 CDS Psed_3474 NC_015312.1 3717706 3718125 R KEGG: nda:Ndas_1248 membrane protein; hypothetical protein complement(3717706..3718125) Pseudonocardia dioxanivorans CB1190 10365310 YP_004333510.1 CDS Psed_3475 NC_015312.1 3718484 3719101 R KEGG: fal:FRAAL6366 hypothetical protein; hypothetical protein complement(3718484..3719101) Pseudonocardia dioxanivorans CB1190 10365311 YP_004333511.1 CDS Psed_3476 NC_015312.1 3719094 3719786 R PFAM: Dienelactone hydrolase; KEGG: sro:Sros_3321 dienelactone hydrolase; dienelactone hydrolase complement(3719094..3719786) Pseudonocardia dioxanivorans CB1190 10365312 YP_004333512.1 CDS Psed_3477 NC_015312.1 3719835 3721844 R PFAM: Erythromycin esterase; Phosphoribosyltransferase; KEGG: mgi:Mflv_4988 erythromycin esterase; erythromycin esterase complement(3719835..3721844) Pseudonocardia dioxanivorans CB1190 10365313 YP_004333513.1 CDS Psed_3478 NC_015312.1 3723281 3724171 D KEGG: ami:Amir_5363 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; SigB/F/G subfamily RNA polymerase sigma-28 subunit 3723281..3724171 Pseudonocardia dioxanivorans CB1190 10365314 YP_004333514.1 CDS Psed_3480 NC_015312.1 3724979 3725365 R KEGG: rha:RHA1_ro06703 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(3724979..3725365) Pseudonocardia dioxanivorans CB1190 10365316 YP_004333515.1 CDS Psed_3481 NC_015312.1 3725448 3728075 R TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sma:SAV_7241 ATP-dependent Clp protease; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB complement(3725448..3728075) Pseudonocardia dioxanivorans CB1190 10365317 YP_004333516.1 CDS Psed_3482 NC_015312.1 3728066 3728449 R KEGG: sro:Sros_4025 hypothetical protein; hypothetical protein complement(3728066..3728449) Pseudonocardia dioxanivorans CB1190 10365318 YP_004333517.1 CDS Psed_3483 NC_015312.1 3728446 3729441 R KEGG: fri:FraEuI1c_6448 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ complement(3728446..3729441) Pseudonocardia dioxanivorans CB1190 10365319 YP_004333518.1 CDS Psed_3484 NC_015312.1 3729445 3730101 R KEGG: sma:SAV_7238 GrpE homologue; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE complement(3729445..3730101) Pseudonocardia dioxanivorans CB1190 10365320 YP_004333519.1 CDS Psed_3485 NC_015312.1 3730110 3731996 R TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: sma:SAV_7237 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK complement(3730110..3731996) Pseudonocardia dioxanivorans CB1190 10365321 YP_004333520.1 CDS Psed_3486 NC_015312.1 3731998 3732552 R KEGG: scb:SCAB_84581 hypothetical protein; hypothetical protein complement(3731998..3732552) Pseudonocardia dioxanivorans CB1190 10365322 YP_004333521.1 CDS Psed_3487 NC_015312.1 3732566 3733039 R PFAM: Heat shock protein Hsp20; KEGG: sna:Snas_3573 heat shock protein HSP20; heat shock protein Hsp20 complement(3732566..3733039) Pseudonocardia dioxanivorans CB1190 10365323 YP_004333522.1 CDS Psed_3488 NC_015312.1 3733635 3734066 R PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: gob:Gobs_2116 anti-sigma-factor antagonist; sulfate transporter/antisigma-factor antagonist STAS complement(3733635..3734066) Pseudonocardia dioxanivorans CB1190 10365324 YP_004333523.1 CDS Psed_3489 NC_015312.1 3734100 3734528 R PFAM: Protein of unknown function DUF2267; KEGG: afw:Anae109_3329 hypothetical protein; hypothetical protein complement(3734100..3734528) Pseudonocardia dioxanivorans CB1190 10365325 YP_004333524.1 CDS Psed_3490 NC_015312.1 3734773 3736680 D PFAM: Major facilitator superfamily MFS-1; KEGG: msm:MSMEG_3536 sugar transport protein; major facilitator superfamily protein 3734773..3736680 Pseudonocardia dioxanivorans CB1190 10365326 YP_004333525.1 CDS Psed_3492 NC_015312.1 3737397 3737654 D PFAM: Transcription factor WhiB; KEGG: cdi:DIP0712 transcriptional regulator; transcription factor WhiB 3737397..3737654 Pseudonocardia dioxanivorans CB1190 10365328 YP_004333526.1 CDS Psed_3493 NC_015312.1 3737752 3738678 D KEGG: bgl:bglu_1g00680 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; ParB domain-containing protein nuclease 3737752..3738678 Pseudonocardia dioxanivorans CB1190 10365329 YP_004333527.1 CDS Psed_3494 NC_015312.1 3739174 3739413 R hypothetical protein complement(3739174..3739413) Pseudonocardia dioxanivorans CB1190 10365330 YP_004333528.1 CDS Psed_3495 NC_015312.1 3739706 3740278 D PFAM: Protein of unknown function DUF308, membrane; KEGG: amd:AMED_1470 hypothetical protein; hypothetical protein 3739706..3740278 Pseudonocardia dioxanivorans CB1190 10365331 YP_004333529.1 CDS Psed_3496 NC_015312.1 3740283 3740642 R KEGG: fal:FRAAL2608 hypothetical protein; hypothetical protein complement(3740283..3740642) Pseudonocardia dioxanivorans CB1190 10365332 YP_004333530.1 CDS Psed_3497 NC_015312.1 3740662 3741345 R KEGG: ava:Ava_C0139 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria; transport-associated protein complement(3740662..3741345) Pseudonocardia dioxanivorans CB1190 10365333 YP_004333531.1 CDS Psed_3500 NC_015312.1 3742503 3743930 R TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: cwo:Cwoe_1220 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase complement(3742503..3743930) Pseudonocardia dioxanivorans CB1190 10365336 YP_004333532.1 CDS Psed_3501 NC_015312.1 3744140 3744337 D hypothetical protein 3744140..3744337 Pseudonocardia dioxanivorans CB1190 10365337 YP_004333533.1 CDS Psed_3502 NC_015312.1 3744922 3746064 R KEGG: aae:aq_199 hypothetical protein; hypothetical protein complement(3744922..3746064) Pseudonocardia dioxanivorans CB1190 10365338 YP_004333534.1 CDS Psed_3503 NC_015312.1 3746121 3747083 R manually curated; KEGG: tbi:Tbis_0798 PDZ/DHR/GLGF domain-containing protein; PDZ/DHR/GLGF domain-containing protein complement(3746121..3747083) Pseudonocardia dioxanivorans CB1190 10365339 YP_004333535.1 CDS Psed_3504 NC_015312.1 3747819 3748532 D KEGG: sro:Sros_3321 dienelactone hydrolase; dienelactone hydrolase 3747819..3748532 Pseudonocardia dioxanivorans CB1190 10365340 YP_004333536.1 CDS Psed_3505 NC_015312.1 3748602 3748754 D hypothetical protein 3748602..3748754 Pseudonocardia dioxanivorans CB1190 10365341 YP_004333537.1 CDS Psed_3508 NC_015312.1 3750256 3750819 D KEGG: sma:SAV_7231 intracellular protease/amidase; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI; Pfpi family intracellular protease 3750256..3750819 Pseudonocardia dioxanivorans CB1190 10365344 YP_004333538.1 CDS Psed_3510 NC_015312.1 3751613 3752068 D KEGG: amd:AMED_8764 transcription elongation factor GreA; transcription elongation factor GreA 3751613..3752068 Pseudonocardia dioxanivorans CB1190 10365346 YP_004333539.1 CDS Psed_3511 NC_015312.1 3752215 3752487 D KEGG: mkm:Mkms_1137 integrase catalytic subunit; hypothetical protein 3752215..3752487 Pseudonocardia dioxanivorans CB1190 10365347 YP_004333540.1 CDS Psed_3512 NC_015312.1 3752732 3753478 D KEGG: geo:Geob_0340 hypothetical protein; hypothetical protein 3752732..3753478 Pseudonocardia dioxanivorans CB1190 10365348 YP_004333541.1 CDS Psed_3513 NC_015312.1 3754320 3755174 R SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: rha:RHA1_ro08065 AraC family transcriptional regulator; AraC family transcriptional regulator complement(3754320..3755174) Pseudonocardia dioxanivorans CB1190 10365349 YP_004333542.1 CDS Psed_3514 NC_015312.1 3755430 3756509 D PFAM: Glycosyl transferase, group 1; KEGG: afo:Afer_0361 glycosyl transferase group 1; group 1 glycosyl transferase 3755430..3756509 Pseudonocardia dioxanivorans CB1190 10365350 YP_004333543.1 CDS Psed_3515 NC_015312.1 3756991 3757215 D KEGG: opr:Ocepr_1698 hypothetical protein; hypothetical protein 3756991..3757215 Pseudonocardia dioxanivorans CB1190 10365351 YP_004333544.1 CDS Psed_3518 NC_015312.1 3758429 3759655 R TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: ami:Amir_5236 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(3758429..3759655) Pseudonocardia dioxanivorans CB1190 10365354 YP_004333545.1 CDS Psed_3519 NC_015312.1 3759659 3759937 R TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: ami:Amir_5237 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase, subunit omega/K/RPABC2; DNA-directed RNA polymerase subunit omega complement(3759659..3759937) Pseudonocardia dioxanivorans CB1190 10365355 YP_004333546.1 CDS Psed_3520 NC_015312.1 3759934 3760596 R manually curated; KEGG: rer:RER_30080 guanylate kinase; SMART: Guanylate kinase/L-type calcium channel; TIGRFAM: Guanylate kinase, sub-group; PFAM: Guanylate kinase; HAMAP: Guanylate kinase, sub-group; guanylate kinase complement(3759934..3760596) Pseudonocardia dioxanivorans CB1190 10365356 YP_004333547.1 CDS Psed_3521 NC_015312.1 3760726 3761040 R KEGG: ami:Amir_5239 hypothetical protein; hypothetical protein complement(3760726..3761040) Pseudonocardia dioxanivorans CB1190 10365357 YP_004333548.1 CDS Psed_3522 NC_015312.1 3761366 3761722 R KEGG: fre:Franean1_6493 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein complement(3761366..3761722) Pseudonocardia dioxanivorans CB1190 10365358 YP_004333549.1 CDS Psed_3523 NC_015312.1 3761853 3762764 R SMART: Orotidine 5'-phosphate decarboxylase domain; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; KEGG: ami:Amir_5240 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; orotidine 5'-phosphate decarboxylase complement(3761853..3762764) Pseudonocardia dioxanivorans CB1190 10365359 YP_004333550.1 CDS Psed_3524 NC_015312.1 3762761 3766060 R SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: sen:SACE_2083 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; carbamoyl-phosphate synthase large subunit complement(3762761..3766060) Pseudonocardia dioxanivorans CB1190 10365360 YP_004333551.1 CDS Psed_3525 NC_015312.1 3766060 3767871 R TIGRFAM: Carbamoyl-phosphate synthase, small subunit; KEGG: sen:SACE_2082 carbamoyl-phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase small subunit complement(3766060..3767871) Pseudonocardia dioxanivorans CB1190 10365361 YP_004333552.1 CDS Psed_3526 NC_015312.1 3767868 3769169 R TIGRFAM: Dihydroorotase; KEGG: svi:Svir_15560 dihydroorotase; PFAM: Amidohydrolase 1; dihydroorotase, multifunctional complex type complement(3767868..3769169) Pseudonocardia dioxanivorans CB1190 10365362 YP_004333553.1 CDS Psed_3527 NC_015312.1 3769181 3770125 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase, eukaryotic; KEGG: sen:SACE_2079 aspartate carbamoyltransferase catalytic chain; aspartate carbamoyltransferase complement(3769181..3770125) Pseudonocardia dioxanivorans CB1190 10365363 YP_004333554.1 CDS Psed_3528 NC_015312.1 3770122 3770709 R HAMAP: Bifunctional protein PyrR; KEGG: rha:RHA1_ro07147 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase complement(3770122..3770709) Pseudonocardia dioxanivorans CB1190 10365364 YP_004333555.1 CDS Psed_3529 NC_015312.1 3771235 3771723 D KEGG: ami:Amir_5247 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 3771235..3771723 Pseudonocardia dioxanivorans CB1190 10365365 YP_004333556.1 CDS Psed_3530 NC_015312.1 3771995 3773161 R PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_7047 major facilitator superfamily sugar transporter; major facilitator superfamily protein complement(3771995..3773161) Pseudonocardia dioxanivorans CB1190 10365366 YP_004333557.1 CDS Psed_3531 NC_015312.1 3773258 3774772 R KEGG: nml:Namu_4904 ankyrin; ankyrin complement(3773258..3774772) Pseudonocardia dioxanivorans CB1190 10365367 YP_004333558.1 CDS Psed_3532 NC_015312.1 3775021 3775440 R TIGRFAM: NusB antitermination factor; HAMAP: NusB antitermination factor; KEGG: ami:Amir_5248 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor complement(3775021..3775440) Pseudonocardia dioxanivorans CB1190 10365368 YP_004333559.1 CDS Psed_3533 NC_015312.1 3775442 3776005 R SMART: Elongation factor P, C-terminal; TIGRFAM: Translation elongation factor P; KEGG: ami:Amir_5249 translation elongation factor P; HAMAP: Translation elongation factor P; PFAM: Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; Elongation factor P, C-terminal; elongation factor P complement(3775442..3776005) Pseudonocardia dioxanivorans CB1190 10365369 YP_004333560.1 CDS Psed_3534 NC_015312.1 3776206 3777294 R PFAM: Peptidase M24, structural domain; Creatinase; KEGG: ami:Amir_5250 peptidase M24; peptidase M24 complement(3776206..3777294) Pseudonocardia dioxanivorans CB1190 10365370 YP_004333561.1 CDS Psed_3535 NC_015312.1 3777299 3778402 R PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase AroB, subgroup; KEGG: ami:Amir_5253 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(3777299..3778402) Pseudonocardia dioxanivorans CB1190 10365371 YP_004333562.1 CDS Psed_3536 NC_015312.1 3778704 3779324 R HAMAP: Shikimate kinase; KEGG: amd:AMED_2734 shikimate kinase; PFAM: Shikimate kinase; shikimate kinase complement(3778704..3779324) Pseudonocardia dioxanivorans CB1190 10365372 YP_004333563.1 CDS Psed_3537 NC_015312.1 3779321 3780508 R TIGRFAM: Chorismate synthase; KEGG: mav:MAV_3417 chorismate synthase; PFAM: Chorismate synthase; chorismate synthase complement(3779321..3780508) Pseudonocardia dioxanivorans CB1190 10365373 YP_004333564.1 CDS Psed_3538 NC_015312.1 3780561 3781424 R PFAM: Peptidase A24A, prepilin type IV; KEGG: sro:Sros_6538 prepilin peptidase; peptidase A24A prepilin type IV complement(3780561..3781424) Pseudonocardia dioxanivorans CB1190 10365374 YP_004333565.1 CDS Psed_3539 NC_015312.1 3781811 3782236 D KEGG: sma:SAV_1780 hypothetical protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 3781811..3782236 Pseudonocardia dioxanivorans CB1190 10365375 YP_004333566.1 CDS Psed_3540 NC_015312.1 3782285 3783121 R KEGG: sco:SCO2803 hypothetical protein; hypothetical protein complement(3782285..3783121) Pseudonocardia dioxanivorans CB1190 10365376 YP_004333567.1 CDS Psed_3541 NC_015312.1 3783165 3785417 R KEGG: amd:AMED_2715 aminodeoxychorismate lyase-like protein; TIGRFAM: Uncharacterised protein family UPF0755; PFAM: Uncharacterised protein family UPF0755; aminodeoxychorismate lyase complement(3783165..3785417) Pseudonocardia dioxanivorans CB1190 10365377 YP_004333568.1 CDS Psed_3542 NC_015312.1 3785520 3785969 R SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: ami:Amir_5264 Holliday junction resolvase YqgF; HAMAP: Resolvase, holliday junction-type, YqgF-like; PFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase complement(3785520..3785969) Pseudonocardia dioxanivorans CB1190 10365378 YP_004333569.1 CDS Psed_3543 NC_015312.1 3785966 3788629 R TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; KEGG: sen:SACE_2052 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD; alanyl-tRNA synthetase complement(3785966..3788629) Pseudonocardia dioxanivorans CB1190 10365379 YP_004333570.1 CDS Psed_3544 NC_015312.1 3788692 3788997 R KEGG: amd:AMED_2712 hypothetical protein; hypothetical protein complement(3788692..3788997) Pseudonocardia dioxanivorans CB1190 10365380 YP_004333571.1 CDS Psed_3545 NC_015312.1 3788994 3789371 R KEGG: sen:SACE_2050 secreted protein; hypothetical protein complement(3788994..3789371) Pseudonocardia dioxanivorans CB1190 10365381 YP_004333572.1 CDS Psed_3546 NC_015312.1 3789453 3790544 R KEGG: svi:Svir_04710 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3789453..3790544) Pseudonocardia dioxanivorans CB1190 10365382 YP_004333573.1 CDS Psed_3547 NC_015312.1 3790825 3791535 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1469 regulatory protein TetR; TetR family transcriptional regulator 3790825..3791535 Pseudonocardia dioxanivorans CB1190 10365383 YP_004333574.1 CDS Psed_3548 NC_015312.1 3791564 3792799 R TIGRFAM: Ornithine aminotransferase; KEGG: gob:Gobs_2808 ornithine aminotransferase; PFAM: Aminotransferase class-III; ornithine aminotransferase complement(3791564..3792799) Pseudonocardia dioxanivorans CB1190 10365384 YP_004333575.1 CDS Psed_3549 NC_015312.1 3792954 3793406 R KEGG: sco:SCO1458 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(3792954..3793406) Pseudonocardia dioxanivorans CB1190 10365385 YP_004333576.1 CDS Psed_3550 NC_015312.1 3793435 3794655 D HAMAP: Arginine deiminase; KEGG: scb:SCAB_23151 arginine deiminase; PFAM: Amidinotransferase; arginine deiminase 3793435..3794655 Pseudonocardia dioxanivorans CB1190 10365386 YP_004333577.1 CDS Psed_3551 NC_015312.1 3794732 3795919 D PFAM: FAD dependent oxidoreductase; KEGG: nml:Namu_2591 hypothetical protein; FAD dependent oxidoreductase 3794732..3795919 Pseudonocardia dioxanivorans CB1190 10365387 YP_004333578.1 CDS Psed_3552 NC_015312.1 3795926 3796546 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nml:Namu_2592 TetR family transcriptional regulator; TetR family transcriptional regulator 3795926..3796546 Pseudonocardia dioxanivorans CB1190 10365388 YP_004333579.1 CDS Psed_3553 NC_015312.1 3796629 3797513 R KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein complement(3796629..3797513) Pseudonocardia dioxanivorans CB1190 10365389 YP_004333580.1 CDS Psed_3554 NC_015312.1 3797591 3799033 R PFAM: Amidase; KEGG: pla:Plav_3043 amidase; amidase complement(3797591..3799033) Pseudonocardia dioxanivorans CB1190 10365390 YP_004333581.1 CDS Psed_3555 NC_015312.1 3799452 3801542 D KEGG: rop:ROP_32800 hydantoinase A; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 3799452..3801542 Pseudonocardia dioxanivorans CB1190 10365391 YP_004333582.1 CDS Psed_3556 NC_015312.1 3801567 3803546 D KEGG: rer:RER_58720 hydantoinase B; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 3801567..3803546 Pseudonocardia dioxanivorans CB1190 10365392 YP_004333583.1 CDS Psed_3557 NC_015312.1 3803635 3805971 D KEGG: oih:OB3304 penicillin acylase; PFAM: Peptidase S45, penicillin amidase; acyl-homoserine-lactone acylase 3803635..3805971 Pseudonocardia dioxanivorans CB1190 10365393 YP_004333584.1 CDS Psed_3558 NC_015312.1 3805995 3807122 R KEGG: tbi:Tbis_2612 PucR family transcriptional regulator; PucR family transcriptional regulator complement(3805995..3807122) Pseudonocardia dioxanivorans CB1190 10365394 YP_004333585.1 CDS Psed_3560 NC_015312.1 3807720 3808211 R KEGG: cai:Caci_5963 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(3807720..3808211) Pseudonocardia dioxanivorans CB1190 10365396 YP_004333586.1 CDS Psed_3561 NC_015312.1 3808310 3808879 D PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: fri:FraEuI1c_2884 aromatic-ring-hydroxylating dioxygenase beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 3808310..3808879 Pseudonocardia dioxanivorans CB1190 10365397 YP_004333587.1 CDS Psed_3562 NC_015312.1 3809228 3810130 D PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: tfu:Tfu_0484 streptogrisin C. Serine peptidase. MEROPS family S01A; peptidase S1 and S6 chymotrypsin/Hap 3809228..3810130 Pseudonocardia dioxanivorans CB1190 10365398 YP_004333588.1 CDS Psed_3563 NC_015312.1 3810142 3811512 R KEGG: svi:Svir_15240 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA complement(3810142..3811512) Pseudonocardia dioxanivorans CB1190 10365399 YP_004333589.1 CDS Psed_3564 NC_015312.1 3811805 3813058 D KEGG: rop:ROP_63240 aminotransferase; PFAM: Aminotransferase, class I/classII; GntR family transcriptional regulator 3811805..3813058 Pseudonocardia dioxanivorans CB1190 10365400 YP_004333590.1 CDS Psed_3565 NC_015312.1 3813070 3813561 D KEGG: aac:Aaci_2663 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 3813070..3813561 Pseudonocardia dioxanivorans CB1190 10365401 YP_004333591.1 CDS Psed_3566 NC_015312.1 3813571 3814725 D KEGG: bts:Btus_0692 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; aspartate transaminase 3813571..3814725 Pseudonocardia dioxanivorans CB1190 10365402 YP_004333592.1 CDS Psed_3567 NC_015312.1 3814955 3815164 D hypothetical protein 3814955..3815164 Pseudonocardia dioxanivorans CB1190 10365403 YP_004333593.1 CDS Psed_3568 NC_015312.1 3815304 3816599 R PFAM: Lipase, GDSL; KEGG: sen:SACE_3285 lipolytic enzyme, G-D-S-L; G-D-S-L family lipolytic protein complement(3815304..3816599) Pseudonocardia dioxanivorans CB1190 10365404 YP_004333594.1 CDS Psed_3569 NC_015312.1 3816684 3817880 R KEGG: sen:SACE_2043 hypothetical protein; hypothetical protein complement(3816684..3817880) Pseudonocardia dioxanivorans CB1190 10365405 YP_004333595.1 CDS Psed_3570 NC_015312.1 3818322 3820106 R TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: sen:SACE_2041 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase complement(3818322..3820106) Pseudonocardia dioxanivorans CB1190 10365406 YP_004333596.1 CDS Psed_3571 NC_015312.1 3820267 3822933 R KEGG: amd:AMED_2699 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Hedgehog/intein hint, N-terminal; Hedgehog/intein hint domain, C-terminal; Radical SAM domain-containing protein complement(3820267..3822933) Pseudonocardia dioxanivorans CB1190 10365407 YP_004333597.1 CDS Psed_3572 NC_015312.1 3823042 3823596 D TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; KEGG: kra:Krad_0597 carbohydrate kinase, thermoresistant glucokinase; PFAM: Shikimate kinase; thermoresistant glucokinase carbohydrate kinase 3823042..3823596 Pseudonocardia dioxanivorans CB1190 10365408 YP_004333598.1 CDS Psed_3573 NC_015312.1 3823705 3825255 D PFAM: YibE/F-like; KEGG: amd:AMED_5281 YibE/F-like protein; hypothetical protein 3823705..3825255 Pseudonocardia dioxanivorans CB1190 10365409 YP_004333599.1 CDS Psed_3574 NC_015312.1 3825203 3825796 R PFAM: Methyltransferase type 12; KEGG: msp:Mspyr1_25700 ribosomal protein L11 methylase; type 12 methyltransferase complement(3825203..3825796) Pseudonocardia dioxanivorans CB1190 10365410 YP_004333600.1 CDS Psed_3575 NC_015312.1 3825803 3827119 R PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: nfa:nfa36640 histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(3825803..3827119) Pseudonocardia dioxanivorans CB1190 10365411 YP_004333601.1 CDS Psed_3576 NC_015312.1 3827116 3827808 R KEGG: ami:Amir_1700 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(3827116..3827808) Pseudonocardia dioxanivorans CB1190 10365412 YP_004333602.1 CDS Psed_3577 NC_015312.1 3827922 3828722 D PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: sen:SACE_2030 peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 3827922..3828722 Pseudonocardia dioxanivorans CB1190 10365413 YP_004333603.1 CDS Psed_3578 NC_015312.1 3828835 3831300 R SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; TIGRFAM: RelA/SpoT protein; KEGG: ami:Amir_1698 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD subdomain; TGS; Amino acid-binding ACT; (p)ppGpp synthetase I SpoT/RelA complement(3828835..3831300) Pseudonocardia dioxanivorans CB1190 10365414 YP_004333604.1 CDS Psed_3579 NC_015312.1 3831334 3831897 R KEGG: sen:SACE_2027 adenine phosphoribosyltransferase; HAMAP: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase complement(3831334..3831897) Pseudonocardia dioxanivorans CB1190 10365415 YP_004333605.1 CDS Psed_3580 NC_015312.1 3831894 3833120 R KEGG: sen:SACE_2026 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecF complement(3831894..3833120) Pseudonocardia dioxanivorans CB1190 10365416 YP_004333606.1 CDS Psed_3581 NC_015312.1 3833122 3834945 R KEGG: svi:Svir_15100 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecD complement(3833122..3834945) Pseudonocardia dioxanivorans CB1190 10365417 YP_004333607.1 CDS Psed_3582 NC_015312.1 3835025 3835540 R KEGG: ami:Amir_1694 preprotein translocase, YajC subunit; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase YajC; preprotein translocase subunit YajC complement(3835025..3835540) Pseudonocardia dioxanivorans CB1190 10365418 YP_004333608.1 CDS Psed_3583 NC_015312.1 3835630 3836670 R SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: amd:AMED_5299 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; Holliday junction ATP-dependent DNA helicase ruvB complement(3835630..3836670) Pseudonocardia dioxanivorans CB1190 10365419 YP_004333609.1 CDS Psed_3584 NC_015312.1 3836696 3837295 R TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Bacterial DNA recombination protein RuvA; KEGG: ami:Amir_1691 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA complement(3836696..3837295) Pseudonocardia dioxanivorans CB1190 10365420 YP_004333610.1 CDS Psed_3585 NC_015312.1 3837292 3837858 R PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: svi:Svir_15060 Holliday junction resolvase; Crossover junction endodeoxyribonuclease ruvC complement(3837292..3837858) Pseudonocardia dioxanivorans CB1190 10365421 YP_004333611.1 CDS Psed_3586 NC_015312.1 3837983 3838375 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kse:Ksed_20380 lactoylglutathione lyase-like lyase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3837983..3838375) Pseudonocardia dioxanivorans CB1190 10365422 YP_004333612.1 CDS Psed_3587 NC_015312.1 3838483 3839646 R KEGG: mil:ML5_4270 hypothetical protein; hypothetical protein complement(3838483..3839646) Pseudonocardia dioxanivorans CB1190 10365423 YP_004333613.1 CDS Psed_3588 NC_015312.1 3839974 3842793 R SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; DNA-directed DNA polymerase, family A, palm domain; TIGRFAM: DNA polymerase 1; KEGG: sen:SACE_5437 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; DNA polymerase I complement(3839974..3842793) Pseudonocardia dioxanivorans CB1190 10365424 YP_004333614.1 CDS Psed_3589 NC_015312.1 3843047 3843622 D PFAM: Bacterial stress protein; KEGG: fre:Franean1_1054 stress protein; stress protein 3843047..3843622 Pseudonocardia dioxanivorans CB1190 10365425 YP_004333615.1 CDS Psed_3590 NC_015312.1 3843631 3844332 D PFAM: Tellurium resistance; Bacterial stress protein; KEGG: gbr:Gbro_4753 tellurium resistance; Tellurium resistance 3843631..3844332 Pseudonocardia dioxanivorans CB1190 10365426 YP_004333616.1 CDS Psed_3591 NC_015312.1 3844391 3845569 D KEGG: tcu:Tcur_3189 hypothetical protein; hypothetical protein 3844391..3845569 Pseudonocardia dioxanivorans CB1190 10365427 YP_004333617.1 CDS Psed_3593 NC_015312.1 3848096 3848950 D KEGG: tcu:Tcur_3186 hypothetical protein; hypothetical protein 3848096..3848950 Pseudonocardia dioxanivorans CB1190 10365429 YP_004333618.1 CDS Psed_3594 NC_015312.1 3848988 3849443 D PFAM: Heat shock protein DnaJ-like protein DjlA; KEGG: rha:RHA1_ro01775 tellurium resistance protein; Tellurite resistance TerB 3848988..3849443 Pseudonocardia dioxanivorans CB1190 10365430 YP_004333619.1 CDS Psed_3595 NC_015312.1 3849537 3851252 R PFAM: Protein of unknown function DUF475; Bacterial stress protein; KEGG: ske:Sked_33950 hypothetical protein; hypothetical protein complement(3849537..3851252) Pseudonocardia dioxanivorans CB1190 10365431 YP_004333620.1 CDS Psed_3596 NC_015312.1 3851480 3852388 R KEGG: pop:POPTR_571331 hypothetical protein; hypothetical protein complement(3851480..3852388) Pseudonocardia dioxanivorans CB1190 10365432 YP_004333621.1 CDS Psed_3597 NC_015312.1 3852520 3853056 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: stp:Strop_1547 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(3852520..3853056) Pseudonocardia dioxanivorans CB1190 10365433 YP_004333622.1 CDS Psed_3598 NC_015312.1 3853112 3853498 R hypothetical protein complement(3853112..3853498) Pseudonocardia dioxanivorans CB1190 10365434 YP_004333623.1 CDS Psed_3599 NC_015312.1 3853621 3854373 R TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: sma:SAV_6832 hypothetical protein; PFAM: Protein of unknown function DUF28; hypothetical protein complement(3853621..3854373) Pseudonocardia dioxanivorans CB1190 10365435 YP_004333624.1 CDS Psed_3600 NC_015312.1 3854538 3855191 R TIGRFAM: Glutamine amidotransferase subunit PdxT; HAMAP: Glutamine amidotransferase subunit PdxT; KEGG: ami:Amir_2109 SNO glutamine amidotransferase; PFAM: Glutamine amidotransferase subunit PdxT; glutamine amidotransferase subunit pdxT complement(3854538..3855191) Pseudonocardia dioxanivorans CB1190 10365436 YP_004333625.1 CDS Psed_3601 NC_015312.1 3855216 3856616 R KEGG: ami:Amir_0465 malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding; malic protein NAD-binding protein complement(3855216..3856616) Pseudonocardia dioxanivorans CB1190 10365437 YP_004333626.1 CDS Psed_3602 NC_015312.1 3856745 3858898 D TIGRFAM: Small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: amd:AMED_5317 elongation factor EF-G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; small GTP-binding protein 3856745..3858898 Pseudonocardia dioxanivorans CB1190 10365438 YP_004333627.1 CDS Psed_3603 NC_015312.1 3858984 3859292 R PFAM: Branched-chain amino acid transport, AzlD; KEGG: tcu:Tcur_0680 branched-chain amino acid transport; branched-chain amino acid transport complement(3858984..3859292) Pseudonocardia dioxanivorans CB1190 10365439 YP_004333628.1 CDS Psed_3604 NC_015312.1 3859289 3860020 R PFAM: Branched-chain amino acid transport, permease; KEGG: sna:Snas_2053 AzlC family protein; AzlC family protein complement(3859289..3860020) Pseudonocardia dioxanivorans CB1190 10365440 YP_004333629.1 CDS Psed_3605 NC_015312.1 3860075 3860647 D KEGG: sen:SACE_2013 DNA-binding protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 3860075..3860647 Pseudonocardia dioxanivorans CB1190 10365441 YP_004333630.1 CDS Psed_3606 NC_015312.1 3860697 3861716 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tcu:Tcur_4812 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(3860697..3861716) Pseudonocardia dioxanivorans CB1190 10365442 YP_004333631.1 CDS Psed_3607 NC_015312.1 3861819 3862748 R TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Vitamin B6 biosynthesis protein; KEGG: sna:Snas_2410 pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; pyridoxal biosynthesis lyase pdxS complement(3861819..3862748) Pseudonocardia dioxanivorans CB1190 10365443 YP_004333632.1 CDS Psed_3608 NC_015312.1 3862792 3863352 R KEGG: ami:Amir_2095 NUDIX hydrolase; NUDIX hydrolase complement(3862792..3863352) Pseudonocardia dioxanivorans CB1190 10365444 YP_004333633.1 CDS Psed_3609 NC_015312.1 3863352 3864542 R KEGG: ami:Amir_2094 phosphatidylinositol alpha-mannosyltransferase; PFAM: Glycosyl transferase, group 1; phosphatidylinositol alpha-mannosyltransferase complement(3863352..3864542) Pseudonocardia dioxanivorans CB1190 10365445 YP_004333634.1 CDS Psed_3610 NC_015312.1 3864539 3865459 R PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: amd:AMED_5323 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase complement(3864539..3865459) Pseudonocardia dioxanivorans CB1190 10365446 YP_004333635.1 CDS Psed_3611 NC_015312.1 3865456 3866085 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sen:SACE_2007 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(3865456..3866085) Pseudonocardia dioxanivorans CB1190 10365447 YP_004333636.1 CDS Psed_3612 NC_015312.1 3866138 3866710 R PFAM: Histidine triad (HIT) protein; KEGG: nfa:nfa37110 hypothetical protein; histidine triad (HIT) protein complement(3866138..3866710) Pseudonocardia dioxanivorans CB1190 10365448 YP_004333637.1 CDS Psed_3613 NC_015312.1 3866721 3868769 R TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding; KEGG: svi:Svir_14910 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD; threonyl-tRNA synthetase complement(3866721..3868769) Pseudonocardia dioxanivorans CB1190 10365449 YP_004333638.1 CDS Psed_3614 NC_015312.1 3868813 3870999 R KEGG: gga:396544 nascent polypeptide-associated complex alpha subunit; hypothetical protein complement(3868813..3870999) Pseudonocardia dioxanivorans CB1190 10365450 YP_004333639.1 CDS Psed_3615 NC_015312.1 3871033 3871473 R KEGG: fri:FraEuI1c_2570 hypothetical protein; hypothetical protein complement(3871033..3871473) Pseudonocardia dioxanivorans CB1190 10365451 YP_004333640.1 CDS Psed_3616 NC_015312.1 3871643 3872992 D KEGG: fre:Franean1_0008 hypothetical protein; hypothetical protein 3871643..3872992 Pseudonocardia dioxanivorans CB1190 10365452 YP_004333641.1 CDS Psed_3617 NC_015312.1 3873792 3874952 R KEGG: ade:Adeh_0244 LigA; hypothetical protein complement(3873792..3874952) Pseudonocardia dioxanivorans CB1190 10365453 YP_004333642.1 CDS Psed_3618 NC_015312.1 3875198 3877333 D PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; KEGG: mva:Mvan_6036 glycosyl transferase protein; glycosyl transferase protein 3875198..3877333 Pseudonocardia dioxanivorans CB1190 10365454 YP_004333643.1 CDS Psed_3619 NC_015312.1 3877330 3877635 D hypothetical protein 3877330..3877635 Pseudonocardia dioxanivorans CB1190 10365455 YP_004333644.1 CDS Psed_3620 NC_015312.1 3877623 3878318 R KEGG: sco:SCO0723 fructose transport system kinase; fructose transport system kinase complement(3877623..3878318) Pseudonocardia dioxanivorans CB1190 10365456 YP_004333645.1 CDS Psed_3621 NC_015312.1 3878361 3879497 D KEGG: sco:SCO5944 hypothetical protein; hypothetical protein 3878361..3879497 Pseudonocardia dioxanivorans CB1190 10365457 YP_004333646.1 CDS Psed_3622 NC_015312.1 3879613 3880353 D KEGG: art:Arth_2739 MerR family transcriptional regulator; PFAM: TipAS antibiotic-recognition; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; antibiotic resistance transcriptional regulator, MerR family 3879613..3880353 Pseudonocardia dioxanivorans CB1190 10365458 YP_004333647.1 CDS Psed_3623 NC_015312.1 3880329 3882806 R TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; PAS fold; PAS fold-3; GAF; KEGG: sro:Sros_3356 serine phosphatase RsbU regulator of sigma subunit-like protein; SMART: Protein phosphatase 2C-like; PAS; PAC motif; PAS/PAC sensor protein complement(3880329..3882806) Pseudonocardia dioxanivorans CB1190 10365459 YP_004333648.1 CDS Psed_3624 NC_015312.1 3882951 3883346 D KEGG: rop:ROP_51030 hypothetical protein; hypothetical protein 3882951..3883346 Pseudonocardia dioxanivorans CB1190 10365460 YP_004333649.1 CDS Psed_3625 NC_015312.1 3883381 3884166 D PFAM: Alpha/beta hydrolase fold-1; KEGG: app:CAP2UW1_1059 alpha/beta hydrolase fold protein; alpha/beta hydrolase 3883381..3884166 Pseudonocardia dioxanivorans CB1190 10365461 YP_004333650.1 CDS Psed_3626 NC_015312.1 3884129 3884539 R KEGG: gob:Gobs_0315 PPOX class F420-dependent enzyme; TIGRFAM: Probable F420-dependent enzyme, PPOX class, family Rv0121; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein complement(3884129..3884539) Pseudonocardia dioxanivorans CB1190 10365462 YP_004333651.1 CDS Psed_3627 NC_015312.1 3884582 3885286 D KEGG: cai:Caci_0619 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 3884582..3885286 Pseudonocardia dioxanivorans CB1190 10365463 YP_004333652.1 CDS Psed_3628 NC_015312.1 3885379 3886365 D PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: mau:Micau_2195 pirin domain-containing protein; pirin 3885379..3886365 Pseudonocardia dioxanivorans CB1190 10365464 YP_004333653.1 CDS Psed_3629 NC_015312.1 3886362 3886649 D KEGG: nda:Ndas_2917 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 3886362..3886649 Pseudonocardia dioxanivorans CB1190 10365465 YP_004333654.1 CDS Psed_3630 NC_015312.1 3886736 3889897 D KEGG: amd:AMED_3525 helicase; PFAM: SNF2-related; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SNF2-like protein 3886736..3889897 Pseudonocardia dioxanivorans CB1190 10365466 YP_004333655.1 CDS Psed_3631 NC_015312.1 3889887 3890753 D KEGG: mtb:TBMG_01880 hypothetical protein; hypothetical protein 3889887..3890753 Pseudonocardia dioxanivorans CB1190 10365467 YP_004333656.1 CDS Psed_3632 NC_015312.1 3890763 3891638 R PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: gob:Gobs_4864 export protein; DnaJ domain-containing protein complement(3890763..3891638) Pseudonocardia dioxanivorans CB1190 10365468 YP_004333657.1 CDS Psed_3633 NC_015312.1 3891691 3892863 D KEGG: svi:Svir_19090 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; cystathionine gamma-synthase 3891691..3892863 Pseudonocardia dioxanivorans CB1190 10365469 YP_004333658.1 CDS Psed_3634 NC_015312.1 3892864 3894129 R KEGG: cai:Caci_2641 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase complement(3892864..3894129) Pseudonocardia dioxanivorans CB1190 10365470 YP_004333659.1 CDS Psed_3635 NC_015312.1 3894122 3894757 R PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: nfa:nfa31470 GTP cyclohydrolase I; GTP cyclohydrolase I complement(3894122..3894757) Pseudonocardia dioxanivorans CB1190 10365471 YP_004333660.1 CDS Psed_3636 NC_015312.1 3894852 3895523 D KEGG: nml:Namu_3645 transcriptional regulator; transcriptional regulator 3894852..3895523 Pseudonocardia dioxanivorans CB1190 10365472 YP_004333661.1 CDS Psed_3637 NC_015312.1 3895511 3897574 R KEGG: sen:SACE_0314 penicillin binding protein (class A); PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase complement(3895511..3897574) Pseudonocardia dioxanivorans CB1190 10365473 YP_004333662.1 CDS Psed_3638 NC_015312.1 3897878 3898147 D TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: nml:Namu_3893 twin-arginine translocation protein, TatA/E family subunit; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; Sec-independent protein translocase tatA/E-like protein 3897878..3898147 Pseudonocardia dioxanivorans CB1190 10365474 YP_004333663.1 CDS Psed_3639 NC_015312.1 3898774 3899529 R KEGG: sen:SACE_0700 short chain dehydrogenase/reductase oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR complement(3898774..3899529) Pseudonocardia dioxanivorans CB1190 10365475 YP_004333664.1 CDS Psed_3640 NC_015312.1 3899675 3900004 D KEGG: mch:Mchl_5398 hypothetical protein; hypothetical protein 3899675..3900004 Pseudonocardia dioxanivorans CB1190 10365476 YP_004333665.1 CDS Psed_3641 NC_015312.1 3900021 3900923 D PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; KEGG: tbi:Tbis_2043 shikimate-5-dehydrogenase; shikimate dehydrogenase substrate binding domain-containing protein 3900021..3900923 Pseudonocardia dioxanivorans CB1190 10365477 YP_004333666.1 CDS Psed_3642 NC_015312.1 3900916 3901722 D PFAM: Methyltransferase type 11; KEGG: gob:Gobs_0254 type 11 methyltransferase; type 11 methyltransferase 3900916..3901722 Pseudonocardia dioxanivorans CB1190 10365478 YP_004333667.1 CDS Psed_3643 NC_015312.1 3901787 3902152 D KEGG: cmi:CMM_0491 hypothetical protein; hypothetical protein 3901787..3902152 Pseudonocardia dioxanivorans CB1190 10365479 YP_004333668.1 CDS Psed_3644 NC_015312.1 3902222 3902701 D KEGG: amd:AMED_3031 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 3902222..3902701 Pseudonocardia dioxanivorans CB1190 10365480 YP_004333669.1 CDS Psed_3645 NC_015312.1 3902698 3903528 D PFAM: ABC transporter-like; KEGG: rop:ROP_48820 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 3902698..3903528 Pseudonocardia dioxanivorans CB1190 10365481 YP_004333670.1 CDS Psed_3646 NC_015312.1 3903488 3904315 D PFAM: ABC-2 type transporter; KEGG: amd:AMED_3028 ABC-2 type transporter; ABC transporter 3903488..3904315 Pseudonocardia dioxanivorans CB1190 10365482 YP_004333671.1 CDS Psed_3647 NC_015312.1 3904356 3906017 D TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; KEGG: sco:SCO7443 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucomutase, alpha-D-glucose phosphate-specific 3904356..3906017 Pseudonocardia dioxanivorans CB1190 10365483 YP_004333672.1 CDS Psed_3648 NC_015312.1 3906019 3906789 D KEGG: kra:Krad_3319 ROK family protein; PFAM: ROK; polyphosphate--glucose phosphotransferase 3906019..3906789 Pseudonocardia dioxanivorans CB1190 10365484 YP_004333673.1 CDS Psed_3649 NC_015312.1 3906832 3907332 R PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS complement(3906832..3907332) Pseudonocardia dioxanivorans CB1190 10365485 YP_004333674.1 CDS Psed_3650 NC_015312.1 3907584 3907994 R PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: rha:RHA1_ro08339 hypothetical protein; anti-sigma-factor antagonist complement(3907584..3907994) Pseudonocardia dioxanivorans CB1190 10365486 YP_004333675.1 CDS Psed_3651 NC_015312.1 3908289 3908585 D hypothetical protein 3908289..3908585 Pseudonocardia dioxanivorans CB1190 10365487 YP_004333676.1 CDS Psed_3652 NC_015312.1 3908602 3908889 R hypothetical protein complement(3908602..3908889) Pseudonocardia dioxanivorans CB1190 10365488 YP_004333677.1 CDS Psed_3653 NC_015312.1 3909029 3909415 D hypothetical protein 3909029..3909415 Pseudonocardia dioxanivorans CB1190 10365489 YP_004333678.1 CDS Psed_3654 NC_015312.1 3909416 3910903 R PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_4222 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein complement(3909416..3910903) Pseudonocardia dioxanivorans CB1190 10365490 YP_004333679.1 CDS Psed_3655 NC_015312.1 3910935 3911555 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_1662 transcriptional regulator, TetR family; TetR family transcriptional regulator 3910935..3911555 Pseudonocardia dioxanivorans CB1190 10365491 YP_004333680.1 CDS Psed_3656 NC_015312.1 3911599 3912126 D KEGG: kra:Krad_3604 hypothetical protein; hypothetical protein 3911599..3912126 Pseudonocardia dioxanivorans CB1190 10365492 YP_004333681.1 CDS Psed_3658 NC_015312.1 3912835 3913881 D KEGG: nml:Namu_4893 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-G type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Nuclear transport factor 2; ECF subfamily RNA polymerase sigma-24 subunit 3912835..3913881 Pseudonocardia dioxanivorans CB1190 10365494 YP_004333682.1 CDS Psed_3659 NC_015312.1 3914042 3914869 D PFAM: Protein of unknown function DUF574; KEGG: sen:SACE_4240 hypothetical protein; hypothetical protein 3914042..3914869 Pseudonocardia dioxanivorans CB1190 10365495 YP_004333683.1 CDS Psed_3660 NC_015312.1 3914930 3915820 R SMART: Helix-turn-helix type 3; KEGG: sro:Sros_7488 hypothetical protein; helix-turn-helix domain-containing protein complement(3914930..3915820) Pseudonocardia dioxanivorans CB1190 10365496 YP_004333684.1 CDS Psed_3661 NC_015312.1 3916016 3916330 R PFAM: Domain of unknown function DUF397; KEGG: sro:Sros_5628 hypothetical protein; hypothetical protein complement(3916016..3916330) Pseudonocardia dioxanivorans CB1190 10365497 YP_004333685.1 CDS Psed_3662 NC_015312.1 3916425 3916811 D hypothetical protein 3916425..3916811 Pseudonocardia dioxanivorans CB1190 10365498 YP_004333686.1 CDS Psed_3663 NC_015312.1 3916942 3918063 D PFAM: Glycosyl transferase, group 1; KEGG: scl:sce5461 glycogen synthase; group 1 glycosyl transferase 3916942..3918063 Pseudonocardia dioxanivorans CB1190 10365499 YP_004333687.1 CDS Psed_3664 NC_015312.1 3918050 3919228 R TIGRFAM: Galactokinase; KEGG: svi:Svir_14320 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; galactokinase complement(3918050..3919228) Pseudonocardia dioxanivorans CB1190 10365500 YP_004333688.1 CDS Psed_3665 NC_015312.1 3919225 3920301 R TIGRFAM: Galactose-1-phosphate uridyl transferase, class I; KEGG: mau:Micau_5380 galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal; Galactose-1-phosphate uridyl transferase, C-terminal; galactose-1-phosphate uridylyltransferase complement(3919225..3920301) Pseudonocardia dioxanivorans CB1190 10365501 YP_004333689.1 CDS Psed_3666 NC_015312.1 3920298 3921092 R KEGG: ami:Amir_0618 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; DeoR family transcriptional regulator complement(3920298..3921092) Pseudonocardia dioxanivorans CB1190 10365502 YP_004333690.1 CDS Psed_3667 NC_015312.1 3921371 3923071 D KEGG: ami:Amir_6118 SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter; SSS sodium solute transporter superfamily protein 3921371..3923071 Pseudonocardia dioxanivorans CB1190 10365503 YP_004333691.1 CDS Psed_3668 NC_015312.1 3923097 3923444 D KEGG: kra:Krad_3708 hypothetical protein; hypothetical protein 3923097..3923444 Pseudonocardia dioxanivorans CB1190 10365504 YP_004333692.1 CDS Psed_3669 NC_015312.1 3923586 3923708 R hypothetical protein complement(3923586..3923708) Pseudonocardia dioxanivorans CB1190 10365505 YP_004333693.1 CDS Psed_3670 NC_015312.1 3923959 3925113 D KEGG: sen:SACE_4589 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 3923959..3925113 Pseudonocardia dioxanivorans CB1190 10365506 YP_004333694.1 CDS Psed_3671 NC_015312.1 3925091 3925843 R KEGG: tcu:Tcur_4638 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(3925091..3925843) Pseudonocardia dioxanivorans CB1190 10365507 YP_004333695.1 CDS Psed_3672 NC_015312.1 3926353 3926934 D KEGG: amd:AMED_5080 hypothetical protein; hypothetical protein 3926353..3926934 Pseudonocardia dioxanivorans CB1190 10365508 YP_004333696.1 CDS Psed_3673 NC_015312.1 3926996 3928480 R KEGG: sro:Sros_8238 carbohydrate kinase, FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; Xylulokinase complement(3926996..3928480) Pseudonocardia dioxanivorans CB1190 10365509 YP_004333697.1 CDS Psed_3674 NC_015312.1 3928504 3929172 D KEGG: svi:Svir_32120 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: Class II aldolase/adducin, N-terminal; L-fuculose-phosphate aldolase 3928504..3929172 Pseudonocardia dioxanivorans CB1190 10365510 YP_004333698.1 CDS Psed_3675 NC_015312.1 3929159 3930382 R KEGG: fre:Franean1_0930 PucR family transcriptional regulator; transcriptional regulator CdaR complement(3929159..3930382) Pseudonocardia dioxanivorans CB1190 10365511 YP_004333699.1 CDS Psed_3676 NC_015312.1 3930482 3931465 D KEGG: sco:SCO6759 phytoene synthase; TIGRFAM: Squalene synthase HpnC; PFAM: Squalene/phytoene synthase; squalene synthase HpnC 3930482..3931465 Pseudonocardia dioxanivorans CB1190 10365512 YP_004333700.1 CDS Psed_3677 NC_015312.1 3931462 3932394 D TIGRFAM: Squalene/phytoene synthase HpnD; KEGG: fre:Franean1_5716 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; squalene synthase HpnD 3931462..3932394 Pseudonocardia dioxanivorans CB1190 10365513 YP_004333701.1 CDS Psed_3678 NC_015312.1 3932391 3933824 D KEGG: scb:SCAB_12971 phytoene dehydrogenase; TIGRFAM: Squalene-associated FAD-dependent desaturase; PFAM: Amine oxidase; squalene-associated FAD-dependent desaturase 3932391..3933824 Pseudonocardia dioxanivorans CB1190 10365514 YP_004333702.1 CDS Psed_3679 NC_015312.1 3933821 3934891 D KEGG: sma:SAV_2997 polyprenyl diphosphate synthase; PFAM: Polyprenyl synthetase; Dimethylallyltranstransferase 3933821..3934891 Pseudonocardia dioxanivorans CB1190 10365515 YP_004333703.1 CDS Psed_3680 NC_015312.1 3934891 3936798 D TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: ace:Acel_1697 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 3934891..3936798 Pseudonocardia dioxanivorans CB1190 10365516 YP_004333704.1 CDS Psed_3681 NC_015312.1 3936795 3938324 D PFAM: LytB protein; Nucleoside phosphorylase domain; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: fri:FraEuI1c_5916 hydroxymethylbutenyl pyrophosphate reductase; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3936795..3938324 Pseudonocardia dioxanivorans CB1190 10365517 YP_004333705.1 CDS Psed_3682 NC_015312.1 3938324 3939328 D KEGG: sgr:SGR_960 hypothetical protein; TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM; hopanoid biosynthesis associated radical SAM protein HpnH 3938324..3939328 Pseudonocardia dioxanivorans CB1190 10365518 YP_004333706.1 CDS Psed_3683 NC_015312.1 3939461 3940135 D KEGG: sen:SACE_4324 hypothetical protein; hypothetical protein 3939461..3940135 Pseudonocardia dioxanivorans CB1190 10365519 YP_004333707.1 CDS Psed_3684 NC_015312.1 3940153 3941265 R PFAM: Monogalactosyldiacylglycerol synthase; Glycosyl transferase, family 28, C-terminal; KEGG: sen:SACE_4322 hypothetical protein; monogalactosyldiacylglycerol synthase complement(3940153..3941265) Pseudonocardia dioxanivorans CB1190 10365520 YP_004333708.1 CDS Psed_3685 NC_015312.1 3941364 3943964 D PFAM: O-acyltransferase, WSD1, N-terminal; KEGG: sen:SACE_4322 hypothetical protein; hypothetical protein 3941364..3943964 Pseudonocardia dioxanivorans CB1190 10365521 YP_004333709.1 CDS Psed_3686 NC_015312.1 3943996 3944925 D KEGG: sen:SACE_4320 integral membrane protein; hypothetical protein 3943996..3944925 Pseudonocardia dioxanivorans CB1190 10365522 YP_004333710.1 CDS Psed_3687 NC_015312.1 3944922 3945665 D KEGG: sen:SACE_4323 short chain dehydrogenase/reductase oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 3944922..3945665 Pseudonocardia dioxanivorans CB1190 10365523 YP_004333711.1 CDS Psed_3688 NC_015312.1 3945914 3946354 R PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: sro:Sros_5387 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase complement(3945914..3946354) Pseudonocardia dioxanivorans CB1190 10365524 YP_004333712.1 CDS Psed_3689 NC_015312.1 3946373 3946972 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: cak:Caul_3647 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 3946373..3946972 Pseudonocardia dioxanivorans CB1190 10365525 YP_004333713.1 CDS Psed_3690 NC_015312.1 3947026 3947484 D KEGG: req:REQ_03160 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 3947026..3947484 Pseudonocardia dioxanivorans CB1190 10365526 YP_004333714.1 CDS Psed_3691 NC_015312.1 3947678 3949036 R PFAM: Major facilitator superfamily MFS-1; KEGG: bch:Bcen2424_0180 major facilitator transporter; major facilitator superfamily protein complement(3947678..3949036) Pseudonocardia dioxanivorans CB1190 10365527 YP_004333715.1 CDS Psed_3692 NC_015312.1 3949039 3950181 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: tcu:Tcur_4712 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(3949039..3950181) Pseudonocardia dioxanivorans CB1190 10365528 YP_004333716.1 CDS Psed_3693 NC_015312.1 3950178 3951356 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: rer:RER_00660 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(3950178..3951356) Pseudonocardia dioxanivorans CB1190 10365529 YP_004333717.1 CDS Psed_3694 NC_015312.1 3951353 3952318 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_00650 ABC transporter permease; ABC transporter permease complement(3951353..3952318) Pseudonocardia dioxanivorans CB1190 10365530 YP_004333718.1 CDS Psed_3695 NC_015312.1 3952311 3953354 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0116 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(3952311..3953354) Pseudonocardia dioxanivorans CB1190 10365531 YP_004333719.1 CDS Psed_3696 NC_015312.1 3953362 3953706 R PFAM: 4Fe-4S binding domain; KEGG: mav:MAV_3500 ferredoxin FdxA; 4Fe-4S ferredoxin complement(3953362..3953706) Pseudonocardia dioxanivorans CB1190 10365532 YP_004333720.1 CDS Psed_3697 NC_015312.1 3953749 3955374 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter substrate-binding protein complement(3953749..3955374) Pseudonocardia dioxanivorans CB1190 10365533 YP_004333721.1 CDS Psed_3698 NC_015312.1 3955519 3956874 R KEGG: reu:Reut_B5781 Rieske (2Fe-2S) region; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase complement(3955519..3956874) Pseudonocardia dioxanivorans CB1190 10365534 YP_004333722.1 CDS Psed_3699 NC_015312.1 3956956 3957639 R PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: svi:Svir_38400 4-carboxy-4-hydroxy-2-oxoadipate aldolase; dimethylmenaquinone methyltransferase complement(3956956..3957639) Pseudonocardia dioxanivorans CB1190 10365535 YP_004333723.1 CDS Psed_3700 NC_015312.1 3957648 3958388 R PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: svi:Svir_38410 uncharacterized LmbE-like protein; LmbE family protein complement(3957648..3958388) Pseudonocardia dioxanivorans CB1190 10365536 YP_004333724.1 CDS Psed_3701 NC_015312.1 3958613 3959296 D KEGG: ach:Achl_3363 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 3958613..3959296 Pseudonocardia dioxanivorans CB1190 10365537 YP_004333725.1 CDS Psed_3702 NC_015312.1 3959370 3960512 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: rde:RD1_3941 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; vitamin-B12 independent methionine synthase 3959370..3960512 Pseudonocardia dioxanivorans CB1190 10365538 YP_004333726.1 CDS Psed_3703 NC_015312.1 3960520 3961239 D KEGG: svi:Svir_38390 predicted hydrolase or acyltransferase of alpha/beta superfamily; hydrolase or acyltransferase of alpha/beta superfamily 3960520..3961239 Pseudonocardia dioxanivorans CB1190 10365539 YP_004333727.1 CDS Psed_3704 NC_015312.1 3961307 3961582 D PFAM: Muconolactone delta-isomerase; KEGG: svi:Svir_38380 muconolactone delta-isomerase; Muconolactone delta-isomerase 3961307..3961582 Pseudonocardia dioxanivorans CB1190 10365540 YP_004333728.1 CDS Psed_3705 NC_015312.1 3961585 3963285 D KEGG: azl:AZL_a11060 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; acetolactate synthase 3961585..3963285 Pseudonocardia dioxanivorans CB1190 10365541 YP_004333729.1 CDS Psed_3706 NC_015312.1 3963348 3964178 D PFAM: Alpha/beta hydrolase fold-1; KEGG: swi:Swit_2666 alpha/beta hydrolase fold; alpha/beta hydrolase 3963348..3964178 Pseudonocardia dioxanivorans CB1190 10365542 YP_004333730.1 CDS Psed_3707 NC_015312.1 3964147 3965133 R PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: bha:BH0777 acetoin dehydrogenase (TPP-dependent) beta chain; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase complement(3964147..3965133) Pseudonocardia dioxanivorans CB1190 10365543 YP_004333731.1 CDS Psed_3708 NC_015312.1 3965130 3966134 R KEGG: cwo:Cwoe_4083 pyruvate dehydrogenase (acetyl-transferring); PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase complement(3965130..3966134) Pseudonocardia dioxanivorans CB1190 10365544 YP_004333732.1 CDS Psed_3709 NC_015312.1 3966131 3967129 R PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: dat:HRM2_47610 PdhB; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase complement(3966131..3967129) Pseudonocardia dioxanivorans CB1190 10365545 YP_004333733.1 CDS Psed_3710 NC_015312.1 3967191 3968210 R KEGG: bha:BH0776 acetoin dehydrogenase (TPP-dependent) alpha chain; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase complement(3967191..3968210) Pseudonocardia dioxanivorans CB1190 10365546 YP_004333734.1 CDS Psed_3711 NC_015312.1 3968207 3969094 R PFAM: Xylose isomerase, TIM barrel domain; KEGG: lch:Lcho_0839 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein complement(3968207..3969094) Pseudonocardia dioxanivorans CB1190 10365547 YP_004333735.1 CDS Psed_3712 NC_015312.1 3969091 3970548 R KEGG: cwo:Cwoe_0765 catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase complement(3969091..3970548) Pseudonocardia dioxanivorans CB1190 10365548 YP_004333736.1 CDS Psed_3713 NC_015312.1 3970794 3971858 R KEGG: nml:Namu_0675 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(3970794..3971858) Pseudonocardia dioxanivorans CB1190 10365549 YP_004333737.1 CDS Psed_3714 NC_015312.1 3972089 3973138 D KEGG: rxy:Rxyl_0351 alcohol dehydrogenase GroES-like protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; L-iditol 2-dehydrogenase 3972089..3973138 Pseudonocardia dioxanivorans CB1190 10365550 YP_004333738.1 CDS Psed_3715 NC_015312.1 3973159 3974121 R KEGG: pjd:Pjdr2_2937 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase complement(3973159..3974121) Pseudonocardia dioxanivorans CB1190 10365551 YP_004333739.1 CDS Psed_3716 NC_015312.1 3974118 3974882 R KEGG: mno:Mnod_3276 hypothetical protein; hypothetical protein complement(3974118..3974882) Pseudonocardia dioxanivorans CB1190 10365552 YP_004333740.1 CDS Psed_3717 NC_015312.1 3974879 3975706 R KEGG: cwo:Cwoe_5069 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(3974879..3975706) Pseudonocardia dioxanivorans CB1190 10365553 YP_004333741.1 CDS Psed_3718 NC_015312.1 3975746 3976570 R KEGG: fre:Franean1_6831 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(3975746..3976570) Pseudonocardia dioxanivorans CB1190 10365554 YP_004333742.1 CDS Psed_3719 NC_015312.1 3976567 3977280 R PFAM: cyclase; KEGG: cwo:Cwoe_5006 cyclase protein; cyclase complement(3976567..3977280) Pseudonocardia dioxanivorans CB1190 10365555 YP_004333743.1 CDS Psed_3720 NC_015312.1 3977277 3978212 R PFAM: Amidohydrolase 2; KEGG: htu:Htur_3788 amidohydrolase 2; amidohydrolase complement(3977277..3978212) Pseudonocardia dioxanivorans CB1190 10365556 YP_004333744.1 CDS Psed_3721 NC_015312.1 3978209 3978919 R PFAM: Alpha/beta hydrolase fold-1; KEGG: mpt:Mpe_A3531 hydrolase or acyltransferase-like protein; alpha/beta hydrolase complement(3978209..3978919) Pseudonocardia dioxanivorans CB1190 10365557 YP_004333745.1 CDS Psed_3722 NC_015312.1 3978924 3979292 R KEGG: bra:BRADO5799 hypothetical protein; hypothetical protein complement(3978924..3979292) Pseudonocardia dioxanivorans CB1190 10365558 YP_004333746.1 CDS Psed_3723 NC_015312.1 3979289 3980299 R PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: sno:Snov_3530 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(3979289..3980299) Pseudonocardia dioxanivorans CB1190 10365559 YP_004333747.1 CDS Psed_3724 NC_015312.1 3980299 3981072 R KEGG: sti:Sthe_3439 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(3980299..3981072) Pseudonocardia dioxanivorans CB1190 10365560 YP_004333748.1 CDS Psed_3725 NC_015312.1 3981200 3982456 R PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_1562 extracellular ligand-binding receptor; ABC transporter substrate-binding protein complement(3981200..3982456) Pseudonocardia dioxanivorans CB1190 10365561 YP_004333749.1 CDS Psed_3726 NC_015312.1 3982453 3983364 R PFAM: Xylose isomerase, TIM barrel domain; KEGG: sus:Acid_3282 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein complement(3982453..3983364) Pseudonocardia dioxanivorans CB1190 10365562 YP_004333750.1 CDS Psed_3727 NC_015312.1 3983571 3984602 R PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: rha:RHA1_ro08624 acetoin dehydrogenase beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase complement(3983571..3984602) Pseudonocardia dioxanivorans CB1190 10365563 YP_004333751.1 CDS Psed_3728 NC_015312.1 3984595 3985575 R KEGG: rha:RHA1_ro08623 acetoin dehydrogenase alpha subunit; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase complement(3984595..3985575) Pseudonocardia dioxanivorans CB1190 10365564 YP_004333752.1 CDS Psed_3729 NC_015312.1 3985785 3986603 R KEGG: bbr:BB2766 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(3985785..3986603) Pseudonocardia dioxanivorans CB1190 10365565 YP_004333753.1 CDS Psed_3730 NC_015312.1 3986823 3987383 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll2712 hypothetical protein; carboxymuconolactone decarboxylase 3986823..3987383 Pseudonocardia dioxanivorans CB1190 10365566 YP_004333754.1 CDS Psed_3731 NC_015312.1 3987473 3988237 R PFAM: ABC transporter-like; KEGG: sti:Sthe_3114 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(3987473..3988237) Pseudonocardia dioxanivorans CB1190 10365567 YP_004333755.1 CDS Psed_3732 NC_015312.1 3988234 3988989 R PFAM: ABC transporter-like; KEGG: met:M446_5639 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase complement(3988234..3988989) Pseudonocardia dioxanivorans CB1190 10365568 YP_004333756.1 CDS Psed_3733 NC_015312.1 3988993 3990072 R PFAM: ABC transporter permease; KEGG: axy:AXYL_01367 inner-membrane translocator 18; ABC transporter permease complement(3988993..3990072) Pseudonocardia dioxanivorans CB1190 10365569 YP_004333757.1 CDS Psed_3734 NC_015312.1 3990069 3990959 R PFAM: ABC transporter permease; KEGG: xau:Xaut_1619 inner-membrane translocator; ABC transporter permease complement(3990069..3990959) Pseudonocardia dioxanivorans CB1190 10365570 YP_004333758.1 CDS Psed_3735 NC_015312.1 3991357 3992121 D KEGG: gob:Gobs_5039 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 3991357..3992121 Pseudonocardia dioxanivorans CB1190 10365571 YP_004333759.1 CDS Psed_3736 NC_015312.1 3992156 3993214 D KEGG: dal:Dalk_4047 propanoyl-CoA C-acyltransferase; hypothetical protein 3992156..3993214 Pseudonocardia dioxanivorans CB1190 10365572 YP_004333760.1 CDS Psed_3737 NC_015312.1 3993211 3994404 D KEGG: bxe:Bxe_A2763 SCP-x_thiolase/acetyl-CoA acetyltransferase, PaaJ-like; propanoyl-CoA C-acyltransferase 3993211..3994404 Pseudonocardia dioxanivorans CB1190 10365573 YP_004333761.1 CDS Psed_3738 NC_015312.1 3994428 3994889 D PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: bxe:Bxe_A2762 hypothetical protein; hypothetical protein 3994428..3994889 Pseudonocardia dioxanivorans CB1190 10365574 YP_004333762.1 CDS Psed_3739 NC_015312.1 3994910 3995935 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: mxa:MXAN_4266 zinc-binding dehydrogenase oxidoreductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 3994910..3995935 Pseudonocardia dioxanivorans CB1190 10365575 YP_004333763.1 CDS Psed_3740 NC_015312.1 3995932 3997593 D KEGG: bxe:Bxe_C0355 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 3995932..3997593 Pseudonocardia dioxanivorans CB1190 10365576 YP_004333764.1 CDS Psed_3741 NC_015312.1 3997590 3998510 D PFAM: cyclase; KEGG: swi:Swit_2102 cyclase protein; cyclase 3997590..3998510 Pseudonocardia dioxanivorans CB1190 10365577 YP_004333765.1 CDS Psed_3742 NC_015312.1 3998507 3999688 R KEGG: ami:Amir_5665 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase complement(3998507..3999688) Pseudonocardia dioxanivorans CB1190 10365578 YP_004333766.1 CDS Psed_3743 NC_015312.1 3999685 4000578 R KEGG: dac:Daci_2567 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase complement(3999685..4000578) Pseudonocardia dioxanivorans CB1190 10365579 YP_004333767.1 CDS Psed_3744 NC_015312.1 4000571 4001011 R PFAM: Carboxymuconolactone decarboxylase; KEGG: slo:Shew_2734 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(4000571..4001011) Pseudonocardia dioxanivorans CB1190 10365580 YP_004333768.1 CDS Psed_3745 NC_015312.1 4001008 4001400 R PFAM: Cupin 2, conserved barrel; KEGG: mrd:Mrad2831_3249 cupin 2 domain-containing protein; cupin complement(4001008..4001400) Pseudonocardia dioxanivorans CB1190 10365581 YP_004333769.1 CDS Psed_3746 NC_015312.1 4001502 4002257 R KEGG: rha:RHA1_ro02613 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(4001502..4002257) Pseudonocardia dioxanivorans CB1190 10365582 YP_004333770.1 CDS Psed_3747 NC_015312.1 4002254 4003804 R PFAM: Amino acid permease domain; KEGG: xce:Xcel_3068 amino acid permease-associated region; amino acid permease complement(4002254..4003804) Pseudonocardia dioxanivorans CB1190 10365583 YP_004333771.1 CDS Psed_3748 NC_015312.1 4004153 4005616 D PFAM: Amino acid permease domain; KEGG: rha:RHA1_ro02609 amino acid transporter; amino acid permease 4004153..4005616 Pseudonocardia dioxanivorans CB1190 10365584 YP_004333772.1 CDS Psed_3749 NC_015312.1 4005646 4007547 D PFAM: Copper amine oxidase, C-terminal; Copper amine oxidase, N3-terminal; Copper amine oxidase, N2-terminal; KEGG: gob:Gobs_1923 primary-amine oxidase; Copper amine oxidase domain-containing protein 4005646..4007547 Pseudonocardia dioxanivorans CB1190 10365585 YP_004333773.1 CDS Psed_3750 NC_015312.1 4007645 4008154 D KEGG: mkm:Mkms_2739 hypothetical protein; hypothetical protein 4007645..4008154 Pseudonocardia dioxanivorans CB1190 10365586 YP_004333774.1 CDS Psed_3751 NC_015312.1 4008229 4008462 R hypothetical protein complement(4008229..4008462) Pseudonocardia dioxanivorans CB1190 10365587 YP_004333775.1 CDS Psed_3752 NC_015312.1 4008619 4010076 R KEGG: swi:Swit_0904 UbiD family decarboxylase; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; UbiD family decarboxylase complement(4008619..4010076) Pseudonocardia dioxanivorans CB1190 10365588 YP_004333776.1 CDS Psed_3753 NC_015312.1 4010076 4010852 R PFAM: Alpha/beta hydrolase fold-1; KEGG: met:M446_4655 3-oxoadipate enol-lactonase; alpha/beta hydrolase complement(4010076..4010852) Pseudonocardia dioxanivorans CB1190 10365589 YP_004333777.1 CDS Psed_3754 NC_015312.1 4010849 4011334 R PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: tro:trd_A0068 aldehyde dehydrogenase subunit III; (2Fe-2S)-binding protein complement(4010849..4011334) Pseudonocardia dioxanivorans CB1190 10365590 YP_004333778.1 CDS Psed_3755 NC_015312.1 4011331 4013703 R KEGG: tro:trd_A0069 probable xanthine dehydrogenase subunit D (XDHase subunit D); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase complement(4011331..4013703) Pseudonocardia dioxanivorans CB1190 10365591 YP_004333779.1 CDS Psed_3756 NC_015312.1 4013660 4014580 R PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: tbi:Tbis_2230 molybdopterin dehydrogenase FAD-binding protein; molybdopterin dehydrogenase FAD-binding protein complement(4013660..4014580) Pseudonocardia dioxanivorans CB1190 10365592 YP_004333780.1 CDS Psed_3757 NC_015312.1 4014577 4015497 R PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: rsq:Rsph17025_1141 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G complement(4014577..4015497) Pseudonocardia dioxanivorans CB1190 10365593 YP_004333781.1 CDS Psed_3758 NC_015312.1 4015653 4016423 D KEGG: scb:SCAB_81001 repressor of aceBA operon; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4015653..4016423 Pseudonocardia dioxanivorans CB1190 10365594 YP_004333782.1 CDS Psed_3759 NC_015312.1 4016637 4018037 D PFAM: Major facilitator superfamily MFS-1; KEGG: acr:Acry_0452 major facilitator transporter; major facilitator superfamily protein 4016637..4018037 Pseudonocardia dioxanivorans CB1190 10365595 YP_004333783.1 CDS Psed_3760 NC_015312.1 4018410 4019729 D PFAM: Major facilitator superfamily MFS-1; KEGG: vdi:Vdis_1658 major facilitator superfamily protein; major facilitator superfamily protein 4018410..4019729 Pseudonocardia dioxanivorans CB1190 10365596 YP_004333784.1 CDS Psed_3761 NC_015312.1 4019787 4021409 D KEGG: fal:FRAAL2367 glutamate synthase(ferredoxin); PFAM: Glutamate synthase, central-C; glutamate synthase 4019787..4021409 Pseudonocardia dioxanivorans CB1190 10365597 YP_004333785.1 CDS Psed_3762 NC_015312.1 4021476 4022972 D TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: ace:Acel_1799 methylmalonate-semialdehyde dehydrogenase (acylating); PFAM: Aldehyde dehydrogenase domain; methylmalonate-semialdehyde dehydrogenase 4021476..4022972 Pseudonocardia dioxanivorans CB1190 10365598 YP_004333786.1 CDS Psed_3763 NC_015312.1 4023370 4024206 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_4864 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4023370..4024206) Pseudonocardia dioxanivorans CB1190 10365599 YP_004333787.1 CDS Psed_3764 NC_015312.1 4024209 4025123 R PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: aau:AAur_0255 3-hydroxybutyrate dehydrogenase; 6-phosphogluconate dehydrogenase complement(4024209..4025123) Pseudonocardia dioxanivorans CB1190 10365600 YP_004333788.1 CDS Psed_3765 NC_015312.1 4025120 4026589 R PFAM: Protein of unknown function, DUF1537; KEGG: cdi:DIP2080 hypothetical protein; Hrp-dependent type III effector-domain-containing protein complement(4025120..4026589) Pseudonocardia dioxanivorans CB1190 10365601 YP_004333789.1 CDS Psed_3766 NC_015312.1 4026586 4027287 R KEGG: aau:AAur_0252 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4026586..4027287) Pseudonocardia dioxanivorans CB1190 10365602 YP_004333790.1 CDS Psed_3767 NC_015312.1 4027362 4028321 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bmj:BMULJ_05022 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase complement(4027362..4028321) Pseudonocardia dioxanivorans CB1190 10365603 YP_004333791.1 CDS Psed_3768 NC_015312.1 4028489 4030801 D KEGG: sma:SAV_50 hypothetical protein; hypothetical protein 4028489..4030801 Pseudonocardia dioxanivorans CB1190 10365604 YP_004333792.1 CDS Psed_3769 NC_015312.1 4030747 4031664 R KEGG: bpf:BpOF4_19035 hypothetical protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter complement(4030747..4031664) Pseudonocardia dioxanivorans CB1190 10365605 YP_004333793.1 CDS Psed_3770 NC_015312.1 4031661 4031957 R PFAM: YCII-related; KEGG: gob:Gobs_1899 YCII-like protein; hypothetical protein complement(4031661..4031957) Pseudonocardia dioxanivorans CB1190 10365606 YP_004333794.1 CDS Psed_3771 NC_015312.1 4031954 4032397 R PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: rdn:HMPREF0733_11511 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(4031954..4032397) Pseudonocardia dioxanivorans CB1190 10365607 YP_004333795.1 CDS Psed_3772 NC_015312.1 4032390 4032716 R KEGG: rha:RHA1_ro05363 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(4032390..4032716) Pseudonocardia dioxanivorans CB1190 10365608 YP_004333796.1 CDS Psed_3773 NC_015312.1 4032737 4033069 R hypothetical protein complement(4032737..4033069) Pseudonocardia dioxanivorans CB1190 10365609 YP_004333797.1 CDS Psed_3774 NC_015312.1 4033184 4034401 R KEGG: amd:AMED_8897 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(4033184..4034401) Pseudonocardia dioxanivorans CB1190 10365610 YP_004333798.1 CDS Psed_3775 NC_015312.1 4034398 4034784 R PFAM: YCII-related; KEGG: kfl:Kfla_3164 YCII-related protein; hypothetical protein complement(4034398..4034784) Pseudonocardia dioxanivorans CB1190 10365611 YP_004333799.1 CDS Psed_3776 NC_015312.1 4034916 4035437 D KEGG: amd:AMED_8895 ketosteroid isomerase-like protein; hypothetical protein 4034916..4035437 Pseudonocardia dioxanivorans CB1190 10365612 YP_004333800.1 CDS Psed_3777 NC_015312.1 4035483 4035869 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cwo:Cwoe_0347 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4035483..4035869 Pseudonocardia dioxanivorans CB1190 10365613 YP_004333801.1 CDS Psed_3778 NC_015312.1 4035915 4037114 D HAMAP: DNA polymerase IV; KEGG: rop:ROP_10970 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV 4035915..4037114 Pseudonocardia dioxanivorans CB1190 10365614 YP_004333802.1 CDS Psed_3779 NC_015312.1 4037171 4037791 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: fre:Franean1_3145 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 4037171..4037791 Pseudonocardia dioxanivorans CB1190 10365615 YP_004333803.1 CDS Psed_3780 NC_015312.1 4037881 4038138 D KEGG: pfh:PFHG_01077 conserved hypothetical protein; hypothetical protein 4037881..4038138 Pseudonocardia dioxanivorans CB1190 10365616 YP_004333804.1 CDS Psed_3781 NC_015312.1 4038206 4039483 R PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type complement(4038206..4039483) Pseudonocardia dioxanivorans CB1190 10365617 YP_004333805.1 CDS Psed_3782 NC_015312.1 4039614 4041230 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sti:Sthe_0680 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein complement(4039614..4041230) Pseudonocardia dioxanivorans CB1190 10365618 YP_004333806.1 CDS Psed_3783 NC_015312.1 4041752 4042039 R hypothetical protein complement(4041752..4042039) Pseudonocardia dioxanivorans CB1190 10365619 YP_004333807.1 CDS Psed_3784 NC_015312.1 4042194 4044236 R KEGG: msp:Mspyr1_20770 NAD+ synthetase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD(+) synthase complement(4042194..4044236) Pseudonocardia dioxanivorans CB1190 10365620 YP_004333808.1 CDS Psed_3785 NC_015312.1 4044357 4044980 D PFAM: Uncharacterised protein family UPF0126; KEGG: nml:Namu_1723 hypothetical protein; hypothetical protein 4044357..4044980 Pseudonocardia dioxanivorans CB1190 10365621 YP_004333809.1 CDS Psed_3786 NC_015312.1 4044996 4045850 R KEGG: svi:Svir_17480 predicted signal-transduction protein containing cAMP-binding and CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein complement(4044996..4045850) Pseudonocardia dioxanivorans CB1190 10365622 YP_004333810.1 CDS Psed_3787 NC_015312.1 4045957 4046895 R PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: met:M446_1737 hypothetical protein; hypothetical protein complement(4045957..4046895) Pseudonocardia dioxanivorans CB1190 10365623 YP_004333811.1 CDS Psed_3788 NC_015312.1 4047045 4048265 D KEGG: gob:Gobs_2385 cytochrome P450; PFAM: Cytochrome P450; peroxidase 4047045..4048265 Pseudonocardia dioxanivorans CB1190 10365624 YP_004333812.1 CDS Psed_3789 NC_015312.1 4048288 4049484 R PFAM: Metallo-dependent phosphatase; KEGG: mva:Mvan_5813 metallophosphoesterase; metallophosphoesterase complement(4048288..4049484) Pseudonocardia dioxanivorans CB1190 10365625 YP_004333813.1 CDS Psed_3790 NC_015312.1 4049623 4051047 D PFAM: Luciferase-like, subgroup; KEGG: nml:Namu_0526 luciferase-like monooxygenase; luciferase-like protein 4049623..4051047 Pseudonocardia dioxanivorans CB1190 10365626 YP_004333814.1 CDS Psed_3791 NC_015312.1 4051146 4051610 D KEGG: gob:Gobs_4432 hypothetical protein; hypothetical protein 4051146..4051610 Pseudonocardia dioxanivorans CB1190 10365627 YP_004333815.1 CDS Psed_3792 NC_015312.1 4051630 4052949 D PFAM: Amino acid permease domain; KEGG: rer:RER_43210 amino acid transporter; amino acid permease 4051630..4052949 Pseudonocardia dioxanivorans CB1190 10365628 YP_004333816.1 CDS Psed_3793 NC_015312.1 4052963 4053997 D KEGG: req:REQ_07080 hydrolase/LuxR domain protein; PFAM: Transcription regulator LuxR, C-terminal; Alpha/beta hydrolase fold-1; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4052963..4053997 Pseudonocardia dioxanivorans CB1190 10365629 YP_004333817.1 CDS Psed_3794 NC_015312.1 4054148 4054771 D PFAM: Methyltransferase type 11; KEGG: req:REQ_07070 sam dependent methyltransferase; type 11 methyltransferase 4054148..4054771 Pseudonocardia dioxanivorans CB1190 10365630 YP_004333818.1 CDS Psed_3795 NC_015312.1 4054863 4055417 D PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: mkm:Mkms_1622 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 4054863..4055417 Pseudonocardia dioxanivorans CB1190 10365631 YP_004333819.1 CDS Psed_3796 NC_015312.1 4055349 4056158 R PFAM: Helix-turn-helix, HxlR type; KEGG: nca:Noca_4912 helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(4055349..4056158) Pseudonocardia dioxanivorans CB1190 10365632 YP_004333820.1 CDS Psed_3797 NC_015312.1 4056226 4057038 D PFAM: Methyltransferase type 11; KEGG: nca:Noca_4919 methyltransferase type 11; type 11 methyltransferase 4056226..4057038 Pseudonocardia dioxanivorans CB1190 10365633 YP_004333821.1 CDS Psed_3798 NC_015312.1 4057405 4058469 R KEGG: mjl:Mjls_0026 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; homoserine O-acetyltransferase complement(4057405..4058469) Pseudonocardia dioxanivorans CB1190 10365635 YP_004333822.1 CDS Psed_3799 NC_015312.1 4058466 4059713 R KEGG: sen:SACE_1932 formamidase; PFAM: Acetamidase/Formamidase; formamidase complement(4058466..4059713) Pseudonocardia dioxanivorans CB1190 10365636 YP_004333823.1 CDS Psed_3800 NC_015312.1 4059798 4060082 R TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: krh:KRH_22990 regulatory protein; SMART: Regulatory protein, FmdB; FmdB family regulatory protein complement(4059798..4060082) Pseudonocardia dioxanivorans CB1190 10365637 YP_004333824.1 CDS Psed_3801 NC_015312.1 4060150 4061235 R KEGG: sma:SAV_1189 regulatory protein; regulatory protein complement(4060150..4061235) Pseudonocardia dioxanivorans CB1190 10365638 YP_004333825.1 CDS Psed_3802 NC_015312.1 4061440 4061868 D KEGG: cai:Caci_6436 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4061440..4061868 Pseudonocardia dioxanivorans CB1190 10365639 YP_004333826.1 CDS Psed_3803 NC_015312.1 4061878 4063338 R SMART: ATPase, AAA+ type, core; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; KEGG: ami:Amir_1616 GTP-binding protein EngA; HAMAP: GTP-binding, EngA; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engA complement(4061878..4063338) Pseudonocardia dioxanivorans CB1190 10365640 YP_004333827.1 CDS Psed_3804 NC_015312.1 4063335 4064000 R KEGG: sen:SACE_5233 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(4063335..4064000) Pseudonocardia dioxanivorans CB1190 10365641 YP_004333828.1 CDS Psed_3805 NC_015312.1 4063997 4064707 R PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: sen:SACE_5234 cytidylate kinase; cytidylate kinase complement(4063997..4064707) Pseudonocardia dioxanivorans CB1190 10365642 YP_004333829.1 CDS Psed_3806 NC_015312.1 4064898 4065260 R KEGG: nda:Ndas_0977 chorismate mutase; TIGRFAM: Chorismate mutase, AroH class; PFAM: Chorismate mutase, AroH class; chorismate mutase complement(4064898..4065260) Pseudonocardia dioxanivorans CB1190 10365643 YP_004333830.1 CDS Psed_3807 NC_015312.1 4065297 4066055 R TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: svi:Svir_25330 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; pseudouridine synthase complement(4065297..4066055) Pseudonocardia dioxanivorans CB1190 10365644 YP_004333831.1 CDS Psed_3808 NC_015312.1 4066120 4066896 R KEGG: sen:SACE_5238 segregation and condensation protein B; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB complement(4066120..4066896) Pseudonocardia dioxanivorans CB1190 10365645 YP_004333832.1 CDS Psed_3809 NC_015312.1 4066893 4067741 R PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: ami:Amir_5427 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA complement(4066893..4067741) Pseudonocardia dioxanivorans CB1190 10365646 YP_004333833.1 CDS Psed_3810 NC_015312.1 4067738 4068673 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sen:SACE_5241 chromosome partitioning protein (partial match); Cobyrinic acid ac-diamide synthase complement(4067738..4068673) Pseudonocardia dioxanivorans CB1190 10365647 YP_004333834.1 CDS Psed_3811 NC_015312.1 4068845 4069612 R KEGG: cwo:Cwoe_0260 hypothetical protein; hypothetical protein complement(4068845..4069612) Pseudonocardia dioxanivorans CB1190 10365648 YP_004333835.1 CDS Psed_3812 NC_015312.1 4069635 4070558 R TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; Tyrosine recombinase XerD; KEGG: msm:MSMEG_3744 site-specific tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC complement(4069635..4070558) Pseudonocardia dioxanivorans CB1190 10365649 YP_004333836.1 CDS Psed_3813 NC_015312.1 4070658 4071653 R KEGG: req:REQ_23690 fmn-dependent monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(4070658..4071653) Pseudonocardia dioxanivorans CB1190 10365650 YP_004333837.1 CDS Psed_3814 NC_015312.1 4071862 4072494 R PFAM: NUDIX hydrolase domain; KEGG: rop:ROP_06630 ADP-ribose pyrophosphatase; NUDIX hydrolase complement(4071862..4072494) Pseudonocardia dioxanivorans CB1190 10365651 YP_004333838.1 CDS Psed_3815 NC_015312.1 4072491 4074257 R PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: sen:SACE_5244 CTP synthetase; CTP synthase complement(4072491..4074257) Pseudonocardia dioxanivorans CB1190 10365652 YP_004333839.1 CDS Psed_3816 NC_015312.1 4074410 4075330 R KEGG: amd:AMED_6021 hypothetical protein; hypothetical protein complement(4074410..4075330) Pseudonocardia dioxanivorans CB1190 10365653 YP_004333840.1 CDS Psed_3817 NC_015312.1 4075327 4076511 R KEGG: amd:AMED_6022 hypothetical protein; hypothetical protein complement(4075327..4076511) Pseudonocardia dioxanivorans CB1190 10365654 YP_004333841.1 CDS Psed_3818 NC_015312.1 4076653 4078497 R KEGG: ami:Amir_5439 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC; DNA repair protein RecN complement(4076653..4078497) Pseudonocardia dioxanivorans CB1190 10365655 YP_004333842.1 CDS Psed_3819 NC_015312.1 4078531 4079478 R KEGG: tcu:Tcur_2170 ATP-NAD/AcoX kinase; HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted; PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; inorganic polyphosphate/ATP-NAD kinase complement(4078531..4079478) Pseudonocardia dioxanivorans CB1190 10365656 YP_004333843.1 CDS Psed_3820 NC_015312.1 4079475 4080275 R TIGRFAM: Haemolysin A; PFAM: RNA-binding S4; Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: gbr:Gbro_2828 hemolysin A; SMART: RNA-binding S4; hemolysin A complement(4079475..4080275) Pseudonocardia dioxanivorans CB1190 10365657 YP_004333844.1 CDS Psed_3821 NC_015312.1 4080281 4080547 R hypothetical protein complement(4080281..4080547) Pseudonocardia dioxanivorans CB1190 10365658 YP_004333845.1 CDS Psed_3822 NC_015312.1 4080648 4081706 R KEGG: sen:SACE_5252 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(4080648..4081706) Pseudonocardia dioxanivorans CB1190 10365659 YP_004333846.1 CDS Psed_3823 NC_015312.1 4081703 4082707 R KEGG: sen:SACE_5253 hypothetical protein; hypothetical protein complement(4081703..4082707) Pseudonocardia dioxanivorans CB1190 10365660 YP_004333847.1 CDS Psed_3824 NC_015312.1 4083283 4084539 R KEGG: bfo:BRAFLDRAFT_89036 hypothetical protein; hypothetical protein complement(4083283..4084539) Pseudonocardia dioxanivorans CB1190 10365661 YP_004333848.1 CDS Psed_3826 NC_015312.1 4091636 4092259 R TIGRFAM: Methylpurine-DNA glycosylase (MPG); HAMAP: Methylpurine-DNA glycosylase (MPG); KEGG: amd:AMED_6033 DNA-3-methyladenine glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG); 3-methyladenine DNA glycosylase complement(4091636..4092259) Pseudonocardia dioxanivorans CB1190 10365666 YP_004333849.1 CDS Psed_3827 NC_015312.1 4092333 4093142 D KEGG: bcm:Bcenmc03_1755 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 4092333..4093142 Pseudonocardia dioxanivorans CB1190 10365667 YP_004333850.1 CDS Psed_3828 NC_015312.1 4093139 4093324 D hypothetical protein 4093139..4093324 Pseudonocardia dioxanivorans CB1190 10365668 YP_004333851.1 CDS Psed_3829 NC_015312.1 4093372 4094763 R PFAM: Lyase 1, N-terminal; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: rha:RHA1_ro00949 argininosuccinate lyase; argininosuccinate lyase complement(4093372..4094763) Pseudonocardia dioxanivorans CB1190 10365669 YP_004333852.1 CDS Psed_3830 NC_015312.1 4094763 4096196 R PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: nca:Noca_2474 argininosuccinate synthase; argininosuccinate synthase complement(4094763..4096196) Pseudonocardia dioxanivorans CB1190 10365670 YP_004333853.1 CDS Psed_3831 NC_015312.1 4096222 4096710 R TIGRFAM: Arginine repressor; HAMAP: Arginine repressor; KEGG: mab:MAB_2341 arginine repressor ArgR; PFAM: Arginine repressor, DNA-binding domain; Arginine repressor, C-terminal; arginine repressor ArgR complement(4096222..4096710) Pseudonocardia dioxanivorans CB1190 10365671 YP_004333854.1 CDS Psed_3832 NC_015312.1 4096707 4097651 R PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: mkm:Mkms_3012 ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(4096707..4097651) Pseudonocardia dioxanivorans CB1190 10365672 YP_004333855.1 CDS Psed_3833 NC_015312.1 4097648 4098838 R PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: rop:ROP_06840 acetylornithine aminotransferase; acetylornithine/succinyldiaminopimelate aminotransferase complement(4097648..4098838) Pseudonocardia dioxanivorans CB1190 10365673 YP_004333856.1 CDS Psed_3834 NC_015312.1 4098835 4099740 R TIGRFAM: Acetylglutamate kinase; KEGG: sen:SACE_5260 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase complement(4098835..4099740) Pseudonocardia dioxanivorans CB1190 10365674 YP_004333857.1 CDS Psed_3835 NC_015312.1 4099724 4100884 R PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: sen:SACE_5261 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; arginine biosynthesis bifunctional protein ArgJ complement(4099724..4100884) Pseudonocardia dioxanivorans CB1190 10365675 YP_004333858.1 CDS Psed_3836 NC_015312.1 4100913 4101956 R KEGG: ami:Amir_5456 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; SMART: Semialdehyde dehydrogenase, NAD-binding; N-acetyl-gamma-glutamyl-phosphate reductase complement(4100913..4101956) Pseudonocardia dioxanivorans CB1190 10365676 YP_004333859.1 CDS Psed_3837 NC_015312.1 4101981 4102775 D PFAM: DNA alkylation repair enzyme; KEGG: amd:AMED_6049 DNA alkylation repair enzyme; DNA alkylation repair protein 4101981..4102775 Pseudonocardia dioxanivorans CB1190 10365677 YP_004333860.1 CDS Psed_3838 NC_015312.1 4102895 4105435 R TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: amd:AMED_6050 phenylalanyl-tRNA synthetase beta chain; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; Phenylalanyl-tRNA synthetase subunit beta complement(4102895..4105435) Pseudonocardia dioxanivorans CB1190 10365678 YP_004333861.1 CDS Psed_3839 NC_015312.1 4105480 4106580 R TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 1, bacterial; KEGG: ami:Amir_5465 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal; Phenylalanyl-tRNA synthetase subunit alpha complement(4105480..4106580) Pseudonocardia dioxanivorans CB1190 10365679 YP_004333862.1 CDS Psed_3840 NC_015312.1 4106617 4107456 R KEGG: ami:Amir_5470 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU complement(4106617..4107456) Pseudonocardia dioxanivorans CB1190 10365680 YP_004333863.1 CDS Psed_3841 NC_015312.1 4107465 4107851 R TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: fri:FraEuI1c_1703 ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 complement(4107465..4107851) Pseudonocardia dioxanivorans CB1190 10365681 YP_004333864.1 CDS Psed_3842 NC_015312.1 4107932 4108126 R TIGRFAM: Ribosomal protein L35, non-mitochondrial; HAMAP: Ribosomal protein L35, non-mitochondrial; KEGG: svi:Svir_25680 50S ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 complement(4107932..4108126) Pseudonocardia dioxanivorans CB1190 10365682 YP_004333865.1 CDS Psed_3843 NC_015312.1 4108197 4108949 R TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor 3; KEGG: ami:Amir_5473 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; translation initiation factor IF-3 complement(4108197..4108949) Pseudonocardia dioxanivorans CB1190 10365683 YP_004333866.1 CDS Psed_3845 NC_015312.1 4109543 4112455 R TIGRFAM: Excinuclease ABC, A subunit; HAMAP: Excinuclease ABC, A subunit; KEGG: nfa:nfa19110 excinuclease ABC subunit A; PFAM: ABC transporter-like; UvrABC system protein A complement(4109543..4112455) Pseudonocardia dioxanivorans CB1190 10365685 YP_004333867.1 CDS Psed_3846 NC_015312.1 4112932 4113606 D KEGG: svi:Svir_25780 Zn-dependent hydrolase, glyoxylase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4112932..4113606 Pseudonocardia dioxanivorans CB1190 10365686 YP_004333868.1 CDS Psed_3847 NC_015312.1 4113701 4114192 D PFAM: Polyketide cyclase/dehydrase; KEGG: rha:RHA1_ro04095 hypothetical protein; polyketide cyclase/dehydrase 4113701..4114192 Pseudonocardia dioxanivorans CB1190 10365687 YP_004333869.1 CDS Psed_3848 NC_015312.1 4114637 4115920 D KEGG: amd:AMED_6371 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 4114637..4115920 Pseudonocardia dioxanivorans CB1190 10365688 YP_004333870.1 CDS Psed_3849 NC_015312.1 4115959 4116141 R hypothetical protein complement(4115959..4116141) Pseudonocardia dioxanivorans CB1190 10365689 YP_004333871.1 CDS Psed_3850 NC_015312.1 4116306 4118411 D KEGG: tbi:Tbis_3037 peptidase S9B dipeptidylpeptidase IV domain-containing protein; peptidase S9B dipeptidylpeptidase IV domain-containing protein 4116306..4118411 Pseudonocardia dioxanivorans CB1190 10365690 YP_004333872.1 CDS Psed_3851 NC_015312.1 4118413 4119891 R PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_2551 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(4118413..4119891) Pseudonocardia dioxanivorans CB1190 10365691 YP_004333873.1 CDS Psed_3852 NC_015312.1 4119990 4120394 D PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: ami:Amir_5503 peptidylprolyl isomerase FKBP-type; FKBP-type peptidylprolyl isomerase 4119990..4120394 Pseudonocardia dioxanivorans CB1190 10365692 YP_004333874.1 CDS Psed_3853 NC_015312.1 4120409 4120927 D manually curated; TIGRFAM: Phosphodiesterase MJ0936; KEGG: sen:SACE_5374 phosphoesterase; PFAM: Metallo-dependent phosphatase; phosphodiesterase 4120409..4120927 Pseudonocardia dioxanivorans CB1190 10365693 YP_004333875.1 CDS Psed_3854 NC_015312.1 4121005 4121295 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mil:ML5_3936 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4121005..4121295 Pseudonocardia dioxanivorans CB1190 10365694 YP_004333876.1 CDS Psed_3855 NC_015312.1 4121429 4124332 D PFAM: ABC transporter-like; Dienelactone hydrolase; KEGG: amd:AMED_6109 ABC transport system ATP-binding protein fused with dipeptidyl-peptidase; SMART: ATPase, AAA+ type, core; Peptidase S15/CocE/NonD, C-terminal; sulfate-transporting ATPase 4121429..4124332 Pseudonocardia dioxanivorans CB1190 10365695 YP_004333877.1 CDS Psed_3856 NC_015312.1 4124329 4125360 D KEGG: ami:Amir_5515 hypothetical protein; hypothetical protein 4124329..4125360 Pseudonocardia dioxanivorans CB1190 10365696 YP_004333878.1 CDS Psed_3857 NC_015312.1 4125497 4125949 D KEGG: amd:AMED_0033 hypothetical protein; hypothetical protein 4125497..4125949 Pseudonocardia dioxanivorans CB1190 10365697 YP_004333879.1 CDS Psed_3858 NC_015312.1 4126099 4127022 R PFAM: Drug/metabolite transporter; KEGG: amd:AMED_8893 drug/metabolite transporter, DME family; hypothetical protein complement(4126099..4127022) Pseudonocardia dioxanivorans CB1190 10365698 YP_004333880.1 CDS Psed_3859 NC_015312.1 4127094 4128008 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: sen:SACE_0264 LysR family transcriptional regulator; LysR family transcriptional regulator 4127094..4128008 Pseudonocardia dioxanivorans CB1190 10365699 YP_004333881.1 CDS Psed_3860 NC_015312.1 4128081 4128659 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_4764 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4128081..4128659) Pseudonocardia dioxanivorans CB1190 10365700 YP_004333882.1 CDS Psed_3861 NC_015312.1 4128747 4129190 D KEGG: mau:Micau_0827 DoxX family protein; DoxX family protein 4128747..4129190 Pseudonocardia dioxanivorans CB1190 10365701 YP_004333883.1 CDS Psed_3862 NC_015312.1 4129403 4129795 D KEGG: sma:SAV_7325 hypothetical protein; hypothetical protein 4129403..4129795 Pseudonocardia dioxanivorans CB1190 10365702 YP_004333884.1 CDS Psed_3863 NC_015312.1 4129807 4130229 R KEGG: gbr:Gbro_2704 hypothetical protein; hypothetical protein complement(4129807..4130229) Pseudonocardia dioxanivorans CB1190 10365703 YP_004333885.1 CDS Psed_3864 NC_015312.1 4130316 4130663 R KEGG: nfa:nfa13740 hypothetical protein; hypothetical protein complement(4130316..4130663) Pseudonocardia dioxanivorans CB1190 10365704 YP_004333886.1 CDS Psed_3865 NC_015312.1 4130666 4131907 R PFAM: Protein of unknown function DUF2029; KEGG: nfa:nfa44660 hypothetical protein; hypothetical protein complement(4130666..4131907) Pseudonocardia dioxanivorans CB1190 10365705 YP_004333887.1 CDS Psed_3866 NC_015312.1 4132054 4134255 R SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: nfa:nfa19020 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; UvrABC system protein B complement(4132054..4134255) Pseudonocardia dioxanivorans CB1190 10365706 YP_004333888.1 CDS Psed_3867 NC_015312.1 4134337 4134837 D PFAM: Domain of unknown function DUF402; KEGG: svi:Svir_25910 hypothetical protein; hypothetical protein 4134337..4134837 Pseudonocardia dioxanivorans CB1190 10365707 YP_004333889.1 CDS Psed_3868 NC_015312.1 4134846 4135364 R KEGG: mva:Mvan_0621 hypothetical protein; hypothetical protein complement(4134846..4135364) Pseudonocardia dioxanivorans CB1190 10365708 YP_004333890.1 CDS Psed_3869 NC_015312.1 4135361 4136242 R KEGG: cai:Caci_8916 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(4135361..4136242) Pseudonocardia dioxanivorans CB1190 10365709 YP_004333891.1 CDS Psed_3870 NC_015312.1 4136336 4137241 R PFAM: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: gbr:Gbro_2870 dephospho-CoA kinase; dephospho-CoA kinase complement(4136336..4137241) Pseudonocardia dioxanivorans CB1190 10365710 YP_004333892.1 CDS Psed_3871 NC_015312.1 4137258 4137890 R KEGG: ami:Amir_5521 hypothetical protein; hypothetical protein complement(4137258..4137890) Pseudonocardia dioxanivorans CB1190 10365711 YP_004333893.1 CDS Psed_3872 NC_015312.1 4138285 4139748 R KEGG: sen:SACE_5431 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; RNA binding S1 domain-containing protein complement(4138285..4139748) Pseudonocardia dioxanivorans CB1190 10365712 YP_004333894.1 CDS Psed_3873 NC_015312.1 4140077 4140949 D PFAM: Methyltransferase type 11; KEGG: ami:Amir_5523 methyltransferase type 11; type 11 methyltransferase 4140077..4140949 Pseudonocardia dioxanivorans CB1190 10365713 YP_004333895.1 CDS Psed_3874 NC_015312.1 4141315 4141770 D KEGG: ami:Amir_5533 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein 4141315..4141770 Pseudonocardia dioxanivorans CB1190 10365714 YP_004333896.1 CDS Psed_3875 NC_015312.1 4141953 4143179 D PFAM: Extracellular ligand-binding receptor; KEGG: nml:Namu_3060 extracellular ligand-binding receptor; ABC transporter substrate-binding protein 4141953..4143179 Pseudonocardia dioxanivorans CB1190 10365715 YP_004333897.1 CDS Psed_3876 NC_015312.1 4143272 4144279 D PFAM: ABC transporter permease; KEGG: mjl:Mjls_3034 inner-membrane translocator; ABC transporter permease 4143272..4144279 Pseudonocardia dioxanivorans CB1190 10365716 YP_004333898.1 CDS Psed_3877 NC_015312.1 4144276 4145445 D PFAM: ABC transporter permease; KEGG: rsa:RSal33209_0250 branched-chain amino acid transport system permease; ABC transporter permease 4144276..4145445 Pseudonocardia dioxanivorans CB1190 10365717 YP_004333899.1 CDS Psed_3878 NC_015312.1 4145442 4146569 D PFAM: ABC transporter-like; KEGG: nml:Namu_3057 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase 4145442..4146569 Pseudonocardia dioxanivorans CB1190 10365718 YP_004333900.1 CDS Psed_3879 NC_015312.1 4146556 4147269 D PFAM: ABC transporter-like; KEGG: mil:ML5_3917 abc transporter related protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 4146556..4147269 Pseudonocardia dioxanivorans CB1190 10365719 YP_004333901.1 CDS Psed_3880 NC_015312.1 4147341 4147970 R KEGG: amd:AMED_6148 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; ANTAR; SMART: Signal transduction response regulator, receiver domain; response regulator receiver and ANTAR domain-containing protein complement(4147341..4147970) Pseudonocardia dioxanivorans CB1190 10365720 YP_004333902.1 CDS Psed_3881 NC_015312.1 4148838 4150103 D PFAM: Domain of unknown function DUF1565; KEGG: scl:sce6360 hypothetical protein; hypothetical protein 4148838..4150103 Pseudonocardia dioxanivorans CB1190 10365722 YP_004333903.1 CDS Psed_3882 NC_015312.1 4150111 4150245 R hypothetical protein complement(4150111..4150245) Pseudonocardia dioxanivorans CB1190 10365723 YP_004333904.1 CDS Psed_3883 NC_015312.1 4150242 4151216 R PFAM: Glycosyl transferase, family 28; KEGG: sen:SACE_6675 UDP-glucose:sterol glucosyltransferase; glycosyl transferase protein complement(4150242..4151216) Pseudonocardia dioxanivorans CB1190 10365724 YP_004333905.1 CDS Psed_3884 NC_015312.1 4151365 4152027 D KEGG: amd:AMED_4379 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4151365..4152027 Pseudonocardia dioxanivorans CB1190 10365725 YP_004333906.1 CDS Psed_3885 NC_015312.1 4152225 4154687 D KEGG: sco:SCO1025 integral membrane protein; hypothetical protein 4152225..4154687 Pseudonocardia dioxanivorans CB1190 10365726 YP_004333907.1 CDS Psed_3886 NC_015312.1 4154695 4155081 D KEGG: svi:Svir_16950 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 4154695..4155081 Pseudonocardia dioxanivorans CB1190 10365727 YP_004333908.1 CDS Psed_3887 NC_015312.1 4155285 4156109 R KEGG: tbi:Tbis_2596 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(4155285..4156109) Pseudonocardia dioxanivorans CB1190 10365728 YP_004333909.1 CDS Psed_3888 NC_015312.1 4156450 4157274 D KEGG: kfl:Kfla_2125 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain; Hydroxypyruvate isomerase 4156450..4157274 Pseudonocardia dioxanivorans CB1190 10365729 YP_004333910.1 CDS Psed_3889 NC_015312.1 4157311 4158201 D TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: amd:AMED_7266 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase 4157311..4158201 Pseudonocardia dioxanivorans CB1190 10365730 YP_004333911.1 CDS Psed_3890 NC_015312.1 4158225 4160018 D TIGRFAM: Glyoxylate carboligase; KEGG: psa:PST_3114 glyoxylate carboligase; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; glyoxylate carboligase 4158225..4160018 Pseudonocardia dioxanivorans CB1190 10365731 YP_004333912.1 CDS Psed_3891 NC_015312.1 4160018 4161151 D TIGRFAM: Glycerate kinase; KEGG: tbi:Tbis_2591 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase 4160018..4161151 Pseudonocardia dioxanivorans CB1190 10365732 YP_004333913.1 CDS Psed_3892 NC_015312.1 4161195 4161980 R KEGG: saq:Sare_2893 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4161195..4161980) Pseudonocardia dioxanivorans CB1190 10365733 YP_004333914.1 CDS Psed_3893 NC_015312.1 4162046 4164160 R KEGG: cwo:Cwoe_1171 chorismate binding-like protein; PFAM: Chorismate binding, C-terminal; Aminotransferase, class IV; anthranilate synthase complement(4162046..4164160) Pseudonocardia dioxanivorans CB1190 10365734 YP_004333915.1 CDS Psed_3894 NC_015312.1 4164564 4165835 D PFAM: YkuD domain; KEGG: nfa:nfa51960 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 4164564..4165835 Pseudonocardia dioxanivorans CB1190 10365735 YP_004333916.1 CDS Psed_3895 NC_015312.1 4165904 4166806 D KEGG: amd:AMED_0317 esterase/lipase-like protein; hypothetical protein 4165904..4166806 Pseudonocardia dioxanivorans CB1190 10365736 YP_004333917.1 CDS Psed_3896 NC_015312.1 4166793 4168586 D KEGG: amd:AMED_0275 lysyl-tRNA synthetase; lysyl-tRNA synthetase 4166793..4168586 Pseudonocardia dioxanivorans CB1190 10365737 YP_004333918.1 CDS Psed_3897 NC_015312.1 4168634 4169275 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: kfl:Kfla_6852 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4168634..4169275) Pseudonocardia dioxanivorans CB1190 10365738 YP_004333919.1 CDS Psed_3898 NC_015312.1 4169431 4170222 D KEGG: nml:Namu_4881 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4169431..4170222 Pseudonocardia dioxanivorans CB1190 10365739 YP_004333920.1 CDS Psed_3899 NC_015312.1 4170233 4171768 D KEGG: rop:ROP_06490 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 4170233..4171768 Pseudonocardia dioxanivorans CB1190 10365740 YP_004333921.1 CDS Psed_3901 NC_015312.1 4173393 4173857 R PFAM: Protein of unknown function DUF1232; KEGG: mil:ML5_1161 hypothetical protein; hypothetical protein complement(4173393..4173857) Pseudonocardia dioxanivorans CB1190 10365742 YP_004333922.1 CDS Psed_3902 NC_015312.1 4174071 4174814 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: fre:Franean1_6014 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 4174071..4174814 Pseudonocardia dioxanivorans CB1190 10365743 YP_004333923.1 CDS Psed_3903 NC_015312.1 4174886 4175281 R KEGG: saq:Sare_4881 hypothetical protein; hypothetical protein complement(4174886..4175281) Pseudonocardia dioxanivorans CB1190 10365744 YP_004333924.1 CDS Psed_3904 NC_015312.1 4175334 4176284 R KEGG: sro:Sros_9286 CO dehydrogenase maturation factor-like protein; CO dehydrogenase maturation factor-like protein complement(4175334..4176284) Pseudonocardia dioxanivorans CB1190 10365745 YP_004333925.1 CDS Psed_3905 NC_015312.1 4176476 4177390 D PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: nmg:Nmag_1492 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 4176476..4177390 Pseudonocardia dioxanivorans CB1190 10365746 YP_004333926.1 CDS Psed_3906 NC_015312.1 4177387 4178667 D PFAM: Luciferase-like, subgroup; KEGG: bts:Btus_1281 luciferase-like, subgroup; luciferase-like protein 4177387..4178667 Pseudonocardia dioxanivorans CB1190 10365747 YP_004333927.1 CDS Psed_3907 NC_015312.1 4178741 4179673 D KEGG: sro:Sros_6284 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4178741..4179673 Pseudonocardia dioxanivorans CB1190 10365748 YP_004333928.1 CDS Psed_3908 NC_015312.1 4179690 4180652 R PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: ade:Adeh_2212 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4179690..4180652) Pseudonocardia dioxanivorans CB1190 10365749 YP_004333929.1 CDS Psed_3909 NC_015312.1 4180866 4181882 D TIGRFAM: 6-phosphogluconate dehydrogenase-related protein; KEGG: fal:FRAAL1567 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase 4180866..4181882 Pseudonocardia dioxanivorans CB1190 10365750 YP_004333930.1 CDS Psed_3910 NC_015312.1 4181879 4183273 D TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: sna:Snas_2996 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 4181879..4183273 Pseudonocardia dioxanivorans CB1190 10365751 YP_004333931.1 CDS Psed_3911 NC_015312.1 4183242 4184084 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sen:SACE_2942 hypothetical protein; GCN5-like N-acetyltransferase complement(4183242..4184084) Pseudonocardia dioxanivorans CB1190 10365752 YP_004333932.1 CDS Psed_3912 NC_015312.1 4184090 4185169 R PFAM: Methyltransferase type 11; KEGG: gob:Gobs_0108 type 11 methyltransferase; type 11 methyltransferase complement(4184090..4185169) Pseudonocardia dioxanivorans CB1190 10365753 YP_004333933.1 CDS Psed_3913 NC_015312.1 4185246 4188329 R KEGG: fal:FRAAL4738 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(4185246..4188329) Pseudonocardia dioxanivorans CB1190 10365754 YP_004333934.1 CDS Psed_3914 NC_015312.1 4188384 4188554 R hypothetical protein complement(4188384..4188554) Pseudonocardia dioxanivorans CB1190 10365755 YP_004333935.1 CDS Psed_3915 NC_015312.1 4188877 4190127 D PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 4188877..4190127 Pseudonocardia dioxanivorans CB1190 10365756 YP_004333936.1 CDS Psed_3916 NC_015312.1 4190139 4190795 R KEGG: met:M446_6961 nitrile hydratase; nitrile hydratase complement(4190139..4190795) Pseudonocardia dioxanivorans CB1190 10365757 YP_004333937.1 CDS Psed_3917 NC_015312.1 4190792 4191400 R TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: rcu:RCOM_1892310 Nitrile hydratase subunit alpha, PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha complement(4190792..4191400) Pseudonocardia dioxanivorans CB1190 10365758 YP_004333938.1 CDS Psed_3918 NC_015312.1 4191575 4192939 D PFAM: FAD linked oxidase, N-terminal; KEGG: nml:Namu_2915 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 4191575..4192939 Pseudonocardia dioxanivorans CB1190 10365759 YP_004333939.1 CDS Psed_3919 NC_015312.1 4192943 4193641 R KEGG: rha:RHA1_ro09027 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4192943..4193641) Pseudonocardia dioxanivorans CB1190 10365760 YP_004333940.1 CDS Psed_3920 NC_015312.1 4193791 4195422 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: vei:Veis_0939 extracellular solute-binding protein; ABC transporter substrate-binding protein complement(4193791..4195422) Pseudonocardia dioxanivorans CB1190 10365761 YP_004333941.1 CDS Psed_3921 NC_015312.1 4195892 4197274 R KEGG: bja:blr0938 dioxygenase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase complement(4195892..4197274) Pseudonocardia dioxanivorans CB1190 10365762 YP_004333942.1 CDS Psed_3922 NC_015312.1 4197385 4197639 R hypothetical protein complement(4197385..4197639) Pseudonocardia dioxanivorans CB1190 10365763 YP_004333943.1 CDS Psed_3923 NC_015312.1 4197636 4198964 R KEGG: bxe:Bxe_A3529 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; phthalate 4,5-dioxygenase complement(4197636..4198964) Pseudonocardia dioxanivorans CB1190 10365764 YP_004333944.1 CDS Psed_3924 NC_015312.1 4199218 4200219 R KEGG: rha:RHA1_ro10365 dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; L-threonine 3-dehydrogenase complement(4199218..4200219) Pseudonocardia dioxanivorans CB1190 10365765 YP_004333945.1 CDS Psed_3925 NC_015312.1 4200234 4201883 R KEGG: tro:trd_A0791 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase complement(4200234..4201883) Pseudonocardia dioxanivorans CB1190 10365766 YP_004333946.1 CDS Psed_3926 NC_015312.1 4202024 4202605 D PFAM: Protein of unknown function DUF1707; KEGG: cai:Caci_0710 protein of unknown function DUF1707; hypothetical protein 4202024..4202605 Pseudonocardia dioxanivorans CB1190 10365767 YP_004333947.1 CDS Psed_3927 NC_015312.1 4202631 4203209 R KEGG: sro:Sros_7324 hypothetical protein; hypothetical protein complement(4202631..4203209) Pseudonocardia dioxanivorans CB1190 10365768 YP_004333948.1 CDS Psed_3928 NC_015312.1 4203254 4204558 R PFAM: Major facilitator superfamily MFS-1; KEGG: tcu:Tcur_4727 major facilitator superfamily protein; major facilitator superfamily protein complement(4203254..4204558) Pseudonocardia dioxanivorans CB1190 10365769 YP_004333949.1 CDS Psed_3929 NC_015312.1 4204659 4205657 D KEGG: mil:ML5_2285 hypothetical protein; hypothetical protein 4204659..4205657 Pseudonocardia dioxanivorans CB1190 10365770 YP_004333950.1 CDS Psed_3930 NC_015312.1 4205660 4207987 R PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: amd:AMED_1985 pyruvate dehydrogenase E1 component; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase complement(4205660..4207987) Pseudonocardia dioxanivorans CB1190 10365771 YP_004333951.1 CDS Psed_3931 NC_015312.1 4208126 4208668 D KEGG: rha:RHA1_ro00541 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 4208126..4208668 Pseudonocardia dioxanivorans CB1190 10365772 YP_004333952.1 CDS Psed_3932 NC_015312.1 4208679 4209995 D PFAM: Beta-lactamase-related; KEGG: gob:Gobs_4863 beta-lactamase; beta-lactamase 4208679..4209995 Pseudonocardia dioxanivorans CB1190 10365773 YP_004333953.1 CDS Psed_3933 NC_015312.1 4210078 4211043 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: tcu:Tcur_4894 alcohol dehydrogenase zinc-binding domain-containing protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(4210078..4211043) Pseudonocardia dioxanivorans CB1190 10365774 YP_004333954.1 CDS Psed_3934 NC_015312.1 4211068 4212285 R PFAM: Major facilitator superfamily MFS-1; KEGG: msm:MSMEG_0534 permease, major facilitator family protein; major facilitator superfamily protein complement(4211068..4212285) Pseudonocardia dioxanivorans CB1190 10365775 YP_004333955.1 CDS Psed_3935 NC_015312.1 4212282 4212947 R KEGG: rop:ROP_42840 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4212282..4212947) Pseudonocardia dioxanivorans CB1190 10365776 YP_004333956.1 CDS Psed_3936 NC_015312.1 4213150 4214829 D KEGG: sna:Snas_4855 hypothetical protein; hypothetical protein 4213150..4214829 Pseudonocardia dioxanivorans CB1190 10365777 YP_004333957.1 CDS Psed_3937 NC_015312.1 4214899 4215447 R hypothetical protein complement(4214899..4215447) Pseudonocardia dioxanivorans CB1190 10365778 YP_004333958.1 CDS Psed_3938 NC_015312.1 4215810 4216331 D hypothetical protein 4215810..4216331 Pseudonocardia dioxanivorans CB1190 10365779 YP_004333959.1 CDS Psed_3939 NC_015312.1 4216349 4217392 D HAMAP: DNA polymerase IV; KEGG: cai:Caci_5822 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV 4216349..4217392 Pseudonocardia dioxanivorans CB1190 10365780 YP_004333960.1 CDS Psed_3940 NC_015312.1 4217441 4218436 R KEGG: fre:Franean1_3778 hypothetical protein; hypothetical protein complement(4217441..4218436) Pseudonocardia dioxanivorans CB1190 10365781 YP_004333961.1 CDS Psed_3941 NC_015312.1 4218645 4219415 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gob:Gobs_0487 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4218645..4219415 Pseudonocardia dioxanivorans CB1190 10365782 YP_004333962.1 CDS Psed_3942 NC_015312.1 4219446 4222769 R KEGG: fre:Franean1_3777 exonuclease SbcC; exonuclease SbcC complement(4219446..4222769) Pseudonocardia dioxanivorans CB1190 10365783 YP_004333963.1 CDS Psed_3943 NC_015312.1 4222766 4223941 R KEGG: fre:Franean1_3776 nuclease SbcCD, D subunit; TIGRFAM: Exonuclease SbcD; PFAM: Metallo-dependent phosphatase; nuclease SbcCD subunit D complement(4222766..4223941) Pseudonocardia dioxanivorans CB1190 10365784 YP_004333964.1 CDS Psed_3944 NC_015312.1 4225006 4226592 D PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 4225006..4226592 Pseudonocardia dioxanivorans CB1190 10365785 YP_004333965.1 CDS Psed_3946 NC_015312.1 4227283 4228929 R KEGG: rer:pREL1_0202 hypothetical protein; manually curated; PFAM: Integrase, N-terminal SAM-like, phage; integrase domain-containing protein SAM domain-containing protein complement(4227283..4228929) Pseudonocardia dioxanivorans CB1190 10365787 YP_004333966.1 CDS Psed_3947 NC_015312.1 4228996 4229313 R KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator complement(4228996..4229313) Pseudonocardia dioxanivorans CB1190 10365788 YP_004333967.1 CDS Psed_3948 NC_015312.1 4229310 4230398 R PFAM: Integrase, catalytic core, phage; KEGG: msp:Mspyr1_54040 site-specific recombinase XerD; integrase protein complement(4229310..4230398) Pseudonocardia dioxanivorans CB1190 10365789 YP_004333968.1 CDS Psed_3949 NC_015312.1 4231115 4231213 R hypothetical protein complement(4231115..4231213) Pseudonocardia dioxanivorans CB1190 10365790 YP_004333969.1 CDS Psed_3950 NC_015312.1 4231784 4232185 R PFAM: Domain of unknown function DUF302; KEGG: bbt:BBta_1896 hypothetical protein; hypothetical protein complement(4231784..4232185) Pseudonocardia dioxanivorans CB1190 10365791 YP_004333970.1 CDS Psed_3951 NC_015312.1 4232220 4234004 R KEGG: fre:Franean1_3775 hypothetical protein; hypothetical protein complement(4232220..4234004) Pseudonocardia dioxanivorans CB1190 10365792 YP_004333971.1 CDS Psed_3952 NC_015312.1 4234081 4234536 R KEGG: mav:MAV_3625 hypothetical protein; hypothetical protein complement(4234081..4234536) Pseudonocardia dioxanivorans CB1190 10365793 YP_004333972.1 CDS Psed_3953 NC_015312.1 4234648 4236120 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; KEGG: ami:Amir_1444 (dimethylallyl)adenosine tRNA methylthiotransferase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; (dimethylallyl)adenosine tRNA methylthiotransferase complement(4234648..4236120) Pseudonocardia dioxanivorans CB1190 10365794 YP_004333973.1 CDS Psed_3954 NC_015312.1 4236214 4237215 D TIGRFAM: TRAP transporter solute receptor, TAXI family; Twin-arginine translocation pathway, signal sequence; KEGG: ami:Amir_1445 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor, TAXI family 4236214..4237215 Pseudonocardia dioxanivorans CB1190 10365795 YP_004333974.1 CDS Psed_3955 NC_015312.1 4237191 4238495 R KEGG: amd:AMED_5688 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Tetratricopeptide TPR2; ECF subfamily RNA polymerase sigma-24 subunit complement(4237191..4238495) Pseudonocardia dioxanivorans CB1190 10365796 YP_004333975.1 CDS Psed_3956 NC_015312.1 4238492 4238884 R PFAM: YCII-related; KEGG: rop:ROP_45120 hypothetical protein; hypothetical protein complement(4238492..4238884) Pseudonocardia dioxanivorans CB1190 10365797 YP_004333976.1 CDS Psed_3957 NC_015312.1 4239093 4239698 D TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: sna:Snas_0200 hypothetical protein; hypothetical protein 4239093..4239698 Pseudonocardia dioxanivorans CB1190 10365798 YP_004333977.1 CDS Psed_3958 NC_015312.1 4239710 4241089 R KEGG: amd:AMED_2365 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase complement(4239710..4241089) Pseudonocardia dioxanivorans CB1190 10365799 YP_004333978.1 CDS Psed_3959 NC_015312.1 4241096 4241839 R KEGG: ami:Amir_1447 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(4241096..4241839) Pseudonocardia dioxanivorans CB1190 10365800 YP_004333979.1 CDS Psed_3960 NC_015312.1 4242022 4242750 D PFAM: ABC transporter-like; KEGG: amd:AMED_2363 ATPase component of ABC-type polar amino acid transport system; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 4242022..4242750 Pseudonocardia dioxanivorans CB1190 10365801 YP_004333980.1 CDS Psed_3961 NC_015312.1 4242809 4243696 D KEGG: amd:AMED_2362 ABC transport system substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein 4242809..4243696 Pseudonocardia dioxanivorans CB1190 10365802 YP_004333981.1 CDS Psed_3962 NC_015312.1 4243763 4244410 D KEGG: svi:Svir_27720 amino acid ABC transporter membrane protein; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 4243763..4244410 Pseudonocardia dioxanivorans CB1190 10365803 YP_004333982.1 CDS Psed_3963 NC_015312.1 4244407 4245306 D KEGG: ami:Amir_1451 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 4244407..4245306 Pseudonocardia dioxanivorans CB1190 10365804 YP_004333983.1 CDS Psed_3964 NC_015312.1 4245355 4246011 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: kfl:Kfla_6908 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(4245355..4246011) Pseudonocardia dioxanivorans CB1190 10365805 YP_004333984.1 CDS Psed_3965 NC_015312.1 4246097 4247269 D KEGG: sco:SCO1748 expression regulator; expression regulator 4246097..4247269 Pseudonocardia dioxanivorans CB1190 10365806 YP_004333985.1 CDS Psed_3966 NC_015312.1 4247282 4250308 R HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: ami:Amir_0913 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase, repeated domain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase complement(4247282..4250308) Pseudonocardia dioxanivorans CB1190 10365807 YP_004333986.1 CDS Psed_3967 NC_015312.1 4250325 4251422 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: fra:Francci3_1854 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(4250325..4251422) Pseudonocardia dioxanivorans CB1190 10365808 YP_004333987.1 CDS Psed_3968 NC_015312.1 4251462 4252805 R TIGRFAM: Glutamine synthetase type I; KEGG: sen:SACE_1613 glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; glutamine synthetase complement(4251462..4252805) Pseudonocardia dioxanivorans CB1190 10365809 YP_004333988.1 CDS Psed_3969 NC_015312.1 4252894 4254549 R PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; KEGG: amd:AMED_1217 exported protease; TAP domain-containing protein complement(4252894..4254549) Pseudonocardia dioxanivorans CB1190 10365810 YP_004333989.1 CDS Psed_3970 NC_015312.1 4254716 4255594 D PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: amd:AMED_1209 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4254716..4255594 Pseudonocardia dioxanivorans CB1190 10365811 YP_004333990.1 CDS Psed_3971 NC_015312.1 4255655 4256785 R PFAM: Glutamate--cysteine ligase, GCS2; KEGG: ava:Ava_4623 hypothetical protein; glutamate--cysteine ligase GCS2 complement(4255655..4256785) Pseudonocardia dioxanivorans CB1190 10365812 YP_004333991.1 CDS Psed_3972 NC_015312.1 4257127 4257744 D PFAM: Nitroreductase-like; KEGG: azc:AZC_0950 nitroreductase; nitroreductase 4257127..4257744 Pseudonocardia dioxanivorans CB1190 10365813 YP_004333992.1 CDS Psed_3973 NC_015312.1 4257749 4259173 R KEGG: sen:SACE_1600 ribonuclease R; PFAM: Ribonuclease II/R; SMART: Ribonuclease II/R; ribonuclease II complement(4257749..4259173) Pseudonocardia dioxanivorans CB1190 10365814 YP_004333993.1 CDS Psed_3974 NC_015312.1 4259549 4259710 D hypothetical protein 4259549..4259710 Pseudonocardia dioxanivorans CB1190 10365815 YP_004333994.1 CDS Psed_3975 NC_015312.1 4259716 4260441 D KEGG: sma:SAV_6344 hypothetical protein; hypothetical protein 4259716..4260441 Pseudonocardia dioxanivorans CB1190 10365816 YP_004333995.1 CDS Psed_3976 NC_015312.1 4260592 4261314 R TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: mau:Micau_4347 hypothetical protein; hypothetical protein complement(4260592..4261314) Pseudonocardia dioxanivorans CB1190 10365817 YP_004333996.1 CDS Psed_3977 NC_015312.1 4261311 4262144 R KEGG: svi:Svir_20690 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase complement(4261311..4262144) Pseudonocardia dioxanivorans CB1190 10365818 YP_004333997.1 CDS Psed_3978 NC_015312.1 4262500 4264881 R KEGG: sen:SACE_5140 carbon monoxide dehydrogenase large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(4262500..4264881) Pseudonocardia dioxanivorans CB1190 10365819 YP_004333998.1 CDS Psed_3979 NC_015312.1 4265099 4266754 D TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; KEGG: sen:SACE_1784 fumarate hydratase class I; PFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 4265099..4266754 Pseudonocardia dioxanivorans CB1190 10365820 YP_004333999.1 CDS Psed_3980 NC_015312.1 4266881 4267852 R KEGG: sen:SACE_1888 alanine rich lipoprotein LppW; alanine rich lipoprotein LppW complement(4266881..4267852) Pseudonocardia dioxanivorans CB1190 10365821 YP_004334000.1 CDS Psed_3981 NC_015312.1 4268046 4270901 R KEGG: sen:SACE_1780 acetyl-CoA synthetase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type; SMART: CoA-binding; GCN5-like N-acetyltransferase complement(4268046..4270901) Pseudonocardia dioxanivorans CB1190 10365822 YP_004334001.1 CDS Psed_3982 NC_015312.1 4270894 4272060 R KEGG: ami:Amir_1468 histone deacetylase superfamily; PFAM: Histone deacetylase superfamily; histone deacetylase complement(4270894..4272060) Pseudonocardia dioxanivorans CB1190 10365823 YP_004334002.1 CDS Psed_3983 NC_015312.1 4272231 4272953 D KEGG: ami:Amir_1465 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor, diptheria toxin type; DtxR family iron (metal) dependent repressor 4272231..4272953 Pseudonocardia dioxanivorans CB1190 10365824 YP_004334003.1 CDS Psed_3984 NC_015312.1 4273152 4274111 D TIGRFAM: UDP-glucose 4-epimerase; KEGG: sen:SACE_1774 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 4273152..4274111 Pseudonocardia dioxanivorans CB1190 10365825 YP_004334004.1 CDS Psed_3985 NC_015312.1 4274138 4275163 R KEGG: ami:Amir_1461 hypothetical protein; hypothetical protein complement(4274138..4275163) Pseudonocardia dioxanivorans CB1190 10365826 YP_004334005.1 CDS Psed_3986 NC_015312.1 4275892 4276785 R PFAM: Peptidase M23; KEGG: req:REQ_10850 metallopeptidase; peptidase M23 complement(4275892..4276785) Pseudonocardia dioxanivorans CB1190 10365827 YP_004334006.1 CDS Psed_3987 NC_015312.1 4277193 4280744 R PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rop:ROP_13260 indolepyruvate ferredoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase complement(4277193..4280744) Pseudonocardia dioxanivorans CB1190 10365828 YP_004334007.1 CDS Psed_3988 NC_015312.1 4280862 4282436 R KEGG: gob:Gobs_2329 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(4280862..4282436) Pseudonocardia dioxanivorans CB1190 10365829 YP_004334008.1 CDS Psed_3989 NC_015312.1 4282736 4283476 D KEGG: sro:Sros_5635 hypothetical protein; hypothetical protein 4282736..4283476 Pseudonocardia dioxanivorans CB1190 10365830 YP_004334009.1 CDS Psed_3990 NC_015312.1 4283556 4284674 D PFAM: Beta-lactamase-like; KEGG: req:REQ_10450 metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 4283556..4284674 Pseudonocardia dioxanivorans CB1190 10365831 YP_004334010.1 CDS Psed_3991 NC_015312.1 4285020 4285355 D KEGG: svi:Svir_17040 hypothetical protein; hypothetical protein 4285020..4285355 Pseudonocardia dioxanivorans CB1190 10365832 YP_004334011.1 CDS Psed_3992 NC_015312.1 4285493 4286248 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa43330 short chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(4285493..4286248) Pseudonocardia dioxanivorans CB1190 10365833 YP_004334012.1 CDS Psed_3993 NC_015312.1 4286402 4287601 R PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_1156 MDR-like permease; major facilitator superfamily protein complement(4286402..4287601) Pseudonocardia dioxanivorans CB1190 10365834 YP_004334013.1 CDS Psed_3994 NC_015312.1 4287649 4289130 D KEGG: ami:Amir_5685 aromatic-L-amino-acid decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; Aromatic-L-amino-acid decarboxylase 4287649..4289130 Pseudonocardia dioxanivorans CB1190 10365835 YP_004334014.1 CDS Psed_3995 NC_015312.1 4289190 4290164 D PFAM: Periplasmic binding protein; KEGG: req:REQ_03550 substrate binding lipoprotein; ABC transporter substrate-binding protein 4289190..4290164 Pseudonocardia dioxanivorans CB1190 10365836 YP_004334015.1 CDS Psed_3996 NC_015312.1 4290152 4291120 R KEGG: sen:SACE_2691 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; methionyl-tRNA formyltransferase complement(4290152..4291120) Pseudonocardia dioxanivorans CB1190 10365837 YP_004334016.1 CDS Psed_3997 NC_015312.1 4291242 4291868 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_3446 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4291242..4291868) Pseudonocardia dioxanivorans CB1190 10365838 YP_004334017.1 CDS Psed_3998 NC_015312.1 4291865 4293016 R KEGG: tbi:Tbis_0526 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; long-chain-acyl-CoA dehydrogenase complement(4291865..4293016) Pseudonocardia dioxanivorans CB1190 10365839 YP_004334018.1 CDS Psed_3999 NC_015312.1 4293033 4293794 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rer:RER_56230 3-hydroxyacyl-CoA dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-hydroxy-2-methylbutyryl-CoA dehydrogenase complement(4293033..4293794) Pseudonocardia dioxanivorans CB1190 10365840 YP_004334019.1 CDS Psed_4000 NC_015312.1 4293876 4295021 R TIGRFAM: Thiolase; KEGG: amd:AMED_3855 acetyl-CoA acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase complement(4293876..4295021) Pseudonocardia dioxanivorans CB1190 10365841 YP_004334020.1 CDS Psed_4001 NC_015312.1 4295396 4295887 R KEGG: ace:Acel_0606 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(4295396..4295887) Pseudonocardia dioxanivorans CB1190 10365842 YP_004334021.1 CDS Psed_4002 NC_015312.1 4295896 4298496 R PFAM: Major facilitator superfamily MFS-1; Collagen-binding surface protein Cna-like, B-type domain; KEGG: amd:AMED_2033 MFS transporter, multidrug efflux transporter; major facilitator superfamily protein complement(4295896..4298496) Pseudonocardia dioxanivorans CB1190 10365843 YP_004334022.1 CDS Psed_4003 NC_015312.1 4298716 4299171 D KEGG: nfa:nfa11310 hypothetical protein; hypothetical protein 4298716..4299171 Pseudonocardia dioxanivorans CB1190 10365844 YP_004334023.1 CDS Psed_4004 NC_015312.1 4299286 4301088 R PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; KEGG: mil:ML5_5681 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase complement(4299286..4301088) Pseudonocardia dioxanivorans CB1190 10365845 YP_004334024.1 CDS Psed_4005 NC_015312.1 4301133 4304393 R KEGG: sen:SACE_3154 biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; Carboxyl transferase; SMART: Biotin carboxylase, C-terminal; carbamoyl-phosphate synthase L chain ATP-binding protein complement(4301133..4304393) Pseudonocardia dioxanivorans CB1190 10365846 YP_004334025.1 CDS Psed_4006 NC_015312.1 4304390 4305643 R KEGG: mva:Mvan_0393 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; isovaleryl-CoA dehydrogenase complement(4304390..4305643) Pseudonocardia dioxanivorans CB1190 10365847 YP_004334026.1 CDS Psed_4007 NC_015312.1 4305636 4306865 R PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: mkm:Mkms_5277 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase complement(4305636..4306865) Pseudonocardia dioxanivorans CB1190 10365848 YP_004334027.1 CDS Psed_4008 NC_015312.1 4306964 4307308 D hypothetical protein 4306964..4307308 Pseudonocardia dioxanivorans CB1190 10365849 YP_004334028.1 CDS Psed_4009 NC_015312.1 4307329 4307856 R PFAM: UspA; KEGG: sma:SAV_7295 hypothetical protein; UspA domain-containing protein complement(4307329..4307856) Pseudonocardia dioxanivorans CB1190 10365850 YP_004334029.1 CDS Psed_4010 NC_015312.1 4307853 4309208 R PFAM: Major facilitator superfamily MFS-1; KEGG: ace:Acel_0045 major facilitator transporter; major facilitator superfamily protein complement(4307853..4309208) Pseudonocardia dioxanivorans CB1190 10365851 YP_004334030.1 CDS Psed_4011 NC_015312.1 4309205 4309726 R KEGG: ace:Acel_0044 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(4309205..4309726) Pseudonocardia dioxanivorans CB1190 10365852 YP_004334031.1 CDS Psed_4012 NC_015312.1 4309875 4310273 D KEGG: amd:AMED_8818 hypothetical protein; hypothetical protein 4309875..4310273 Pseudonocardia dioxanivorans CB1190 10365853 YP_004334032.1 CDS Psed_4013 NC_015312.1 4310294 4311781 D KEGG: mva:Mvan_1920 short chain dehydrogenase; short chain dehydrogenase 4310294..4311781 Pseudonocardia dioxanivorans CB1190 10365854 YP_004334033.1 CDS Psed_4014 NC_015312.1 4311897 4315271 D KEGG: nml:Namu_3908 exodeoxyribonuclease V subunit gamma; TIGRFAM: Exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma 4311897..4315271 Pseudonocardia dioxanivorans CB1190 10365855 YP_004334034.1 CDS Psed_4015 NC_015312.1 4315268 4318681 D TIGRFAM: Exodeoxyribonuclease V, beta subunit; KEGG: cfl:Cfla_2429 exodeoxyribonuclease V; PFAM: DNA helicase, UvrD/REP type; exodeoxyribonuclease V subunit beta 4315268..4318681 Pseudonocardia dioxanivorans CB1190 10365856 YP_004334035.1 CDS Psed_4016 NC_015312.1 4318678 4320843 D TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: nml:Namu_3906 exodeoxyribonuclease V subunit alpha; SMART: ATPase, AAA+ type, core; exodeoxyribonuclease V subunit alpha 4318678..4320843 Pseudonocardia dioxanivorans CB1190 10365857 YP_004334036.1 CDS Psed_4017 NC_015312.1 4320921 4322597 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Signal transduction response regulator, receiver domain; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: fal:FRAAL1961 thioredoxin reductase; SMART: Signal transduction response regulator, receiver domain; response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4320921..4322597 Pseudonocardia dioxanivorans CB1190 10365858 YP_004334037.1 CDS Psed_4018 NC_015312.1 4322594 4324057 D KEGG: rha:RHA1_ro04003 sensor kinase, two-component system; PFAM: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase 4322594..4324057 Pseudonocardia dioxanivorans CB1190 10365859 YP_004334038.1 CDS Psed_4019 NC_015312.1 4324131 4324469 D KEGG: req:REQ_46000 hypothetical protein; hypothetical protein 4324131..4324469 Pseudonocardia dioxanivorans CB1190 10365860 YP_004334039.1 CDS Psed_4020 NC_015312.1 4324491 4324661 R KEGG: lxx:Lxx21740 hypothetical protein; hypothetical protein complement(4324491..4324661) Pseudonocardia dioxanivorans CB1190 10365861 YP_004334040.1 CDS Psed_4021 NC_015312.1 4324909 4325784 D HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mil:ML5_5193 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD 4324909..4325784 Pseudonocardia dioxanivorans CB1190 10365862 YP_004334041.1 CDS Psed_4022 NC_015312.1 4325795 4327066 R KEGG: fri:FraEuI1c_0839 drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; Bcr/CflA subfamily drug resistance transporter complement(4325795..4327066) Pseudonocardia dioxanivorans CB1190 10365863 YP_004334042.1 CDS Psed_4023 NC_015312.1 4327063 4328769 R PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; KEGG: amd:AMED_2697 SARP family transcriptional regulator fused with ATPase domain; SARP family transcriptional regulator complement(4327063..4328769) Pseudonocardia dioxanivorans CB1190 10365864 YP_004334043.1 CDS Psed_4025 NC_015312.1 4329487 4329801 R PFAM: Branched-chain amino acid transport, AzlD; KEGG: rsk:RSKD131_2097 branched-chain amino acid transport; branched-chain amino acid transport complement(4329487..4329801) Pseudonocardia dioxanivorans CB1190 10365866 YP_004334044.1 CDS Psed_4026 NC_015312.1 4329794 4330543 R PFAM: Branched-chain amino acid transport, permease; KEGG: hla:Hlac_1381 AzlC family protein; AzlC family protein complement(4329794..4330543) Pseudonocardia dioxanivorans CB1190 10365867 YP_004334045.1 CDS Psed_4027 NC_015312.1 4330864 4331328 R KEGG: nca:Noca_1870 regulatory protein, MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(4330864..4331328) Pseudonocardia dioxanivorans CB1190 10365868 YP_004334046.1 CDS Psed_4028 NC_015312.1 4331505 4332593 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A1008 hypothetical protein; NAD-dependent epimerase/dehydratase 4331505..4332593 Pseudonocardia dioxanivorans CB1190 10365869 YP_004334047.1 CDS Psed_4029 NC_015312.1 4332627 4333316 R KEGG: ske:Sked_05160 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4332627..4333316) Pseudonocardia dioxanivorans CB1190 10365870 YP_004334048.1 CDS Psed_4030 NC_015312.1 4333393 4334121 D PFAM: Cysteine-rich domain; KEGG: mjl:Mjls_4766 hypothetical protein; hypothetical protein 4333393..4334121 Pseudonocardia dioxanivorans CB1190 10365871 YP_004334049.1 CDS Psed_4031 NC_015312.1 4334118 4335584 D KEGG: fal:FRAAL3348 Fe4-S4 ferredoxin; TIGRFAM: Iron-sulphur cluster binding protein; PFAM: Domain of unknown function DUF162; iron-sulfur cluster binding protein 4334118..4335584 Pseudonocardia dioxanivorans CB1190 10365872 YP_004334050.1 CDS Psed_4033 NC_015312.1 4336274 4337050 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: scb:SCAB_29181 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase 4336274..4337050 Pseudonocardia dioxanivorans CB1190 10365874 YP_004334051.1 CDS Psed_4034 NC_015312.1 4337109 4337618 D KEGG: nfa:nfa36990 hypothetical protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; Appr-1-p processing domain-containing protein 4337109..4337618 Pseudonocardia dioxanivorans CB1190 10365875 YP_004334052.1 CDS Psed_4035 NC_015312.1 4337631 4338710 R KEGG: fre:Franean1_4792 hypothetical protein; hypothetical protein complement(4337631..4338710) Pseudonocardia dioxanivorans CB1190 10365876 YP_004334053.1 CDS Psed_4036 NC_015312.1 4338719 4343239 R KEGG: fre:Franean1_4793 hypothetical protein; hypothetical protein complement(4338719..4343239) Pseudonocardia dioxanivorans CB1190 10365877 YP_004334054.1 CDS Psed_4037 NC_015312.1 4343236 4343958 R KEGG: fre:Franean1_4794 membrane protein; hypothetical protein complement(4343236..4343958) Pseudonocardia dioxanivorans CB1190 10365878 YP_004334055.1 CDS Psed_4038 NC_015312.1 4343955 4345520 R KEGG: fre:Franean1_1848 hypothetical protein; hypothetical protein complement(4343955..4345520) Pseudonocardia dioxanivorans CB1190 10365879 YP_004334056.1 CDS Psed_4039 NC_015312.1 4345760 4346881 D KEGG: aau:AAur_pTC20181 pyridoxal-phosphate dependent enzyme; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cysteine synthase 4345760..4346881 Pseudonocardia dioxanivorans CB1190 10365880 YP_004334057.1 CDS Psed_4040 NC_015312.1 4346932 4347618 D KEGG: bge:BC1002_5910 hypothetical protein; hypothetical protein 4346932..4347618 Pseudonocardia dioxanivorans CB1190 10365881 YP_004334058.1 CDS Psed_4041 NC_015312.1 4347651 4348523 R KEGG: rha:RHA1_ro00619 alkanesulfonate monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(4347651..4348523) Pseudonocardia dioxanivorans CB1190 10365882 YP_004334059.1 CDS Psed_4042 NC_015312.1 4348757 4350265 D PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_3206 major facilitator transporter; major facilitator superfamily protein 4348757..4350265 Pseudonocardia dioxanivorans CB1190 10365883 YP_004334060.1 CDS Psed_4043 NC_015312.1 4350279 4351163 R KEGG: bmj:BMULJ_04328 serine/threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threo-3-hydroxyaspartate ammonia-lyase complement(4350279..4351163) Pseudonocardia dioxanivorans CB1190 10365884 YP_004334061.1 CDS Psed_4045 NC_015312.1 4351663 4352736 R PFAM: Cobalamin (vitamin B12)-binding; KEGG: ami:Amir_0967 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein complement(4351663..4352736) Pseudonocardia dioxanivorans CB1190 10365886 YP_004334062.1 CDS Psed_4046 NC_015312.1 4352733 4354592 R KEGG: mil:ML5_5570 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase complement(4352733..4354592) Pseudonocardia dioxanivorans CB1190 10365887 YP_004334063.1 CDS Psed_4047 NC_015312.1 4354807 4354908 R hypothetical protein complement(4354807..4354908) Pseudonocardia dioxanivorans CB1190 10365888 YP_004334064.1 CDS Psed_4048 NC_015312.1 4355078 4356007 D PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: amd:AMED_3432 RNA pseudouridylate synthase; pseudouridine synthase 4355078..4356007 Pseudonocardia dioxanivorans CB1190 10365889 YP_004334065.1 CDS Psed_4049 NC_015312.1 4356310 4357074 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: smd:Smed_5816 NADP oxidoreductase coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase complement(4356310..4357074) Pseudonocardia dioxanivorans CB1190 10365890 YP_004334066.1 CDS Psed_4050 NC_015312.1 4357143 4357982 D PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fal:FRAAL3649 LysR family transcriptional regulator; LysR family transcriptional regulator 4357143..4357982 Pseudonocardia dioxanivorans CB1190 10365891 YP_004334067.1 CDS Psed_4051 NC_015312.1 4358170 4358958 D KEGG: fra:Francci3_2566 hypothetical protein; hypothetical protein 4358170..4358958 Pseudonocardia dioxanivorans CB1190 10365892 YP_004334068.1 CDS Psed_4052 NC_015312.1 4358936 4360114 R KEGG: rer:RER_18000 oxidoreductase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase complement(4358936..4360114) Pseudonocardia dioxanivorans CB1190 10365893 YP_004334069.1 CDS Psed_4053 NC_015312.1 4360279 4362066 R KEGG: tbi:Tbis_0974 histidine kinase; hypothetical protein complement(4360279..4362066) Pseudonocardia dioxanivorans CB1190 10365894 YP_004334070.1 CDS Psed_4054 NC_015312.1 4362216 4362773 R hypothetical protein complement(4362216..4362773) Pseudonocardia dioxanivorans CB1190 10365895 YP_004334071.1 CDS Psed_4055 NC_015312.1 4362961 4364067 D PFAM: Beta-lactamase-related; KEGG: sna:Snas_3562 beta-lactamase; beta-lactamase 4362961..4364067 Pseudonocardia dioxanivorans CB1190 10365896 YP_004334072.1 CDS Psed_4056 NC_015312.1 4364080 4364700 R KEGG: sro:Sros_3610 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein complement(4364080..4364700) Pseudonocardia dioxanivorans CB1190 10365897 YP_004334073.1 CDS Psed_4057 NC_015312.1 4364773 4367124 D KEGG: mav:MAV_4566 hypothetical protein; hypothetical protein 4364773..4367124 Pseudonocardia dioxanivorans CB1190 10365898 YP_004334074.1 CDS Psed_4058 NC_015312.1 4367256 4368215 D SMART: HTH transcriptional regulator, DeoR N-terminal; KEGG: sen:SACE_7336 DeoR family transcriptional regulator; regulatory protein DeoR 4367256..4368215 Pseudonocardia dioxanivorans CB1190 10365899 YP_004334075.1 CDS Psed_4059 NC_015312.1 4368276 4368674 D KEGG: amd:AMED_6092 hypothetical protein; manually curated; HAMAP: Uncharacterised protein family UPF0225; hypothetical protein 4368276..4368674 Pseudonocardia dioxanivorans CB1190 10365900 YP_004334076.1 CDS Psed_4060 NC_015312.1 4368856 4370751 D PFAM: ABC transporter-like; KEGG: cai:Caci_5807 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4368856..4370751 Pseudonocardia dioxanivorans CB1190 10365901 YP_004334077.1 CDS Psed_4061 NC_015312.1 4370748 4372604 D PFAM: ABC transporter-like; KEGG: cai:Caci_5809 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4370748..4372604 Pseudonocardia dioxanivorans CB1190 10365902 YP_004334078.1 CDS Psed_4062 NC_015312.1 4372708 4373937 D PFAM: Major facilitator superfamily MFS-1; KEGG: gbr:Gbro_0902 major facilitator superfamily protein; major facilitator superfamily protein 4372708..4373937 Pseudonocardia dioxanivorans CB1190 10365903 YP_004334079.1 CDS Psed_4063 NC_015312.1 4374085 4376310 D TIGRFAM: Trehalose synthase; KEGG: mkm:Mkms_0356 trehalose synthase; trehalose synthase 4374085..4376310 Pseudonocardia dioxanivorans CB1190 10365904 YP_004334080.1 CDS Psed_4064 NC_015312.1 4376307 4376726 D KEGG: amd:AMED_5931 hypothetical protein; hypothetical protein 4376307..4376726 Pseudonocardia dioxanivorans CB1190 10365905 YP_004334081.1 CDS Psed_4065 NC_015312.1 4376811 4379057 R PFAM: Peptidase M28; KEGG: nml:Namu_2824 peptidase M28; peptidase M28 complement(4376811..4379057) Pseudonocardia dioxanivorans CB1190 10365906 YP_004334082.1 CDS Psed_4066 NC_015312.1 4379146 4382232 R KEGG: art:Arth_0977 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; type III restriction protein res subunit complement(4379146..4382232) Pseudonocardia dioxanivorans CB1190 10365907 YP_004334083.1 CDS Psed_4067 NC_015312.1 4382381 4382968 R PFAM: Protein of unknown function DUF1470; KEGG: amd:AMED_3547 hypothetical protein; hypothetical protein complement(4382381..4382968) Pseudonocardia dioxanivorans CB1190 10365908 YP_004334084.1 CDS Psed_4068 NC_015312.1 4383197 4383637 D KEGG: reu:Reut_C6041 hypothetical protein; hypothetical protein 4383197..4383637 Pseudonocardia dioxanivorans CB1190 10365909 YP_004334085.1 CDS Psed_4069 NC_015312.1 4383702 4384547 D KEGG: bja:bll0271 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4383702..4384547 Pseudonocardia dioxanivorans CB1190 10365910 YP_004334086.1 CDS Psed_4070 NC_015312.1 4384613 4385461 D KEGG: bja:bll0271 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 4384613..4385461 Pseudonocardia dioxanivorans CB1190 10365911 YP_004334087.1 CDS Psed_4071 NC_015312.1 4385516 4386328 R KEGG: sgr:SGR_6537 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Domain of unknown function DUF1503; hypothetical protein complement(4385516..4386328) Pseudonocardia dioxanivorans CB1190 10365912 YP_004334088.1 CDS Psed_4072 NC_015312.1 4386517 4386876 D KEGG: mjl:Mjls_0419 hypothetical protein; hypothetical protein 4386517..4386876 Pseudonocardia dioxanivorans CB1190 10365913 YP_004334089.1 CDS Psed_4073 NC_015312.1 4387653 4388084 D PFAM: Cupin 2, conserved barrel; KEGG: nda:Ndas_1181 cupin 2 conserved barrel domain protein; cupin 4387653..4388084 Pseudonocardia dioxanivorans CB1190 10365914 YP_004334090.1 CDS Psed_4074 NC_015312.1 4388458 4389225 D PFAM: Alpha/beta hydrolase fold-1; KEGG: gbr:Gbro_2555 alpha/beta hydrolase fold protein; alpha/beta hydrolase 4388458..4389225 Pseudonocardia dioxanivorans CB1190 10365915 YP_004334091.1 CDS Psed_4075 NC_015312.1 4389285 4389746 R PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: rpc:RPC_4620 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(4389285..4389746) Pseudonocardia dioxanivorans CB1190 10365916 YP_004334092.1 CDS Psed_4076 NC_015312.1 4389743 4389877 R hypothetical protein complement(4389743..4389877) Pseudonocardia dioxanivorans CB1190 10365917 YP_004334093.1 CDS Psed_4077 NC_015312.1 4390086 4391267 D KEGG: amd:AMED_5171 dynamin family protein; hypothetical protein 4390086..4391267 Pseudonocardia dioxanivorans CB1190 10365918 YP_004334094.1 CDS Psed_4078 NC_015312.1 4391286 4392017 R KEGG: mkm:Mkms_5685 hypothetical protein; hypothetical protein complement(4391286..4392017) Pseudonocardia dioxanivorans CB1190 10365919 YP_004334095.1 CDS Psed_4079 NC_015312.1 4392440 4393411 D KEGG: fal:FRAAL3972 aldo/keto oxidoreductase, NAD(P)-dependent, related to aryl-alcohol dehydrogenases; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 4392440..4393411 Pseudonocardia dioxanivorans CB1190 10365920 YP_004334096.1 CDS Psed_4080 NC_015312.1 4393480 4394286 R PFAM: Protein of unknown function DUF574; KEGG: saq:Sare_1317 hypothetical protein; hypothetical protein complement(4393480..4394286) Pseudonocardia dioxanivorans CB1190 10365921 YP_004334097.1 CDS Psed_4081 NC_015312.1 4394400 4396544 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-3; KEGG: ami:Amir_6871 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4394400..4396544 Pseudonocardia dioxanivorans CB1190 10365922 YP_004334098.1 CDS Psed_4082 NC_015312.1 4396746 4396925 D hypothetical protein 4396746..4396925 Pseudonocardia dioxanivorans CB1190 10365923 YP_004334099.1 CDS Psed_4083 NC_015312.1 4397056 4397463 D KEGG: gob:Gobs_2804 hypothetical protein; hypothetical protein 4397056..4397463 Pseudonocardia dioxanivorans CB1190 10365924 YP_004334100.1 CDS Psed_4084 NC_015312.1 4397492 4397827 R KEGG: mjl:Mjls_0719 hypothetical protein; hypothetical protein complement(4397492..4397827) Pseudonocardia dioxanivorans CB1190 10365925 YP_004334101.1 CDS Psed_4085 NC_015312.1 4397904 4398278 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nda:Ndas_5080 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4397904..4398278 Pseudonocardia dioxanivorans CB1190 10365926 YP_004334102.1 CDS Psed_4086 NC_015312.1 4398288 4399160 R KEGG: fre:Franean1_5228 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(4398288..4399160) Pseudonocardia dioxanivorans CB1190 10365927 YP_004334103.1 CDS Psed_4087 NC_015312.1 4399157 4400266 R KEGG: pla:Plav_1774 alkanal monooxygenase; PFAM: Luciferase-like, subgroup; alkanal monooxygenase complement(4399157..4400266) Pseudonocardia dioxanivorans CB1190 10365928 YP_004334104.1 CDS Psed_4088 NC_015312.1 4400453 4401559 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: kfl:Kfla_3790 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(4400453..4401559) Pseudonocardia dioxanivorans CB1190 10365929 YP_004334105.1 CDS Psed_4089 NC_015312.1 4401556 4402638 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: kfl:Kfla_3791 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(4401556..4402638) Pseudonocardia dioxanivorans CB1190 10365930 YP_004334106.1 CDS Psed_4090 NC_015312.1 4402656 4403669 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tbi:Tbis_1849 binding-protein-dependent transporter inner membrane component; ABC transporter permease complement(4402656..4403669) Pseudonocardia dioxanivorans CB1190 10365931 YP_004334107.1 CDS Psed_4091 NC_015312.1 4403778 4405529 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sro:Sros_5913 ABC-type dipeptide transport system periplasmic component-like protein; ABC transporter substrate-binding protein complement(4403778..4405529) Pseudonocardia dioxanivorans CB1190 10365932 YP_004334108.1 CDS Psed_4092 NC_015312.1 4405591 4406586 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sro:Sros_5914 ABC transporter, permease; ABC transporter permease complement(4405591..4406586) Pseudonocardia dioxanivorans CB1190 10365933 YP_004334109.1 CDS Psed_4093 NC_015312.1 4407027 4407509 D PFAM: Polyketide cyclase/dehydrase; KEGG: fal:FRAAL2500 hypothetical protein; polyketide cyclase/dehydrase 4407027..4407509 Pseudonocardia dioxanivorans CB1190 10365934 YP_004334110.1 CDS Psed_4094 NC_015312.1 4407583 4408314 R KEGG: rop:ROP_23820 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(4407583..4408314) Pseudonocardia dioxanivorans CB1190 10365935 YP_004334111.1 CDS Psed_4095 NC_015312.1 4408311 4409978 R KEGG: pla:Plav_1766 cyclohexanecarboxylate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(4408311..4409978) Pseudonocardia dioxanivorans CB1190 10365936 YP_004334112.1 CDS Psed_4096 NC_015312.1 4410010 4410948 R KEGG: rop:ROP_46170 oxidoreductase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(4410010..4410948) Pseudonocardia dioxanivorans CB1190 10365937 YP_004334113.1 CDS Psed_4097 NC_015312.1 4411056 4411727 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_23780 TetR family transcriptional regulator; TetR family transcriptional regulator 4411056..4411727 Pseudonocardia dioxanivorans CB1190 10365938 YP_004334114.1 CDS Psed_4098 NC_015312.1 4411724 4412524 D KEGG: nml:Namu_0879 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; naphthoate synthase 4411724..4412524 Pseudonocardia dioxanivorans CB1190 10365939 YP_004334115.1 CDS Psed_4099 NC_015312.1 4412535 4413686 D KEGG: nca:Noca_4298 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 4412535..4413686 Pseudonocardia dioxanivorans CB1190 10365940 YP_004334116.1 CDS Psed_4100 NC_015312.1 4413738 4414073 D hypothetical protein 4413738..4414073 Pseudonocardia dioxanivorans CB1190 10365941 YP_004334117.1 CDS Psed_4101 NC_015312.1 4414153 4414950 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: efa:EF0426 gluconate 5-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(4414153..4414950) Pseudonocardia dioxanivorans CB1190 10365942 YP_004334118.1 CDS Psed_4102 NC_015312.1 4415021 4415278 R KEGG: rha:RHA1_ro08377 hypothetical protein; hypothetical protein complement(4415021..4415278) Pseudonocardia dioxanivorans CB1190 10365943 YP_004334119.1 CDS Psed_4103 NC_015312.1 4415326 4417053 R KEGG: rha:RHA1_ro02518 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; 4-coumarate--CoA ligase complement(4415326..4417053) Pseudonocardia dioxanivorans CB1190 10365944 YP_004334120.1 CDS Psed_4104 NC_015312.1 4417164 4418243 R KEGG: nml:Namu_1715 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; NADPH dehydrogenase complement(4417164..4418243) Pseudonocardia dioxanivorans CB1190 10365945 YP_004334121.1 CDS Psed_4105 NC_015312.1 4418441 4418596 R KEGG: mva:Mvan_2532 hypothetical protein; hypothetical protein complement(4418441..4418596) Pseudonocardia dioxanivorans CB1190 10365946 YP_004334122.1 CDS Psed_4106 NC_015312.1 4418878 4420395 D KEGG: sgr:SGR_1958 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; catalase 4418878..4420395 Pseudonocardia dioxanivorans CB1190 10365947 YP_004334123.1 CDS Psed_4107 NC_015312.1 4420423 4421037 R hypothetical protein complement(4420423..4421037) Pseudonocardia dioxanivorans CB1190 10365948 YP_004334124.1 CDS Psed_4108 NC_015312.1 4421284 4422045 R KEGG: msm:MSMEG_3335 transcriptional regulator, IclR family protein, PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(4421284..4422045) Pseudonocardia dioxanivorans CB1190 10365949 YP_004334125.1 CDS Psed_4109 NC_015312.1 4422205 4423071 D PFAM: Aldehyde-lyase domain; KEGG: msm:MSMEG_6298 malyl-CoA lyase; HpcH/HpaI aldolase 4422205..4423071 Pseudonocardia dioxanivorans CB1190 10365950 YP_004334126.1 CDS Psed_4110 NC_015312.1 4423068 4424468 D PFAM: MmgE/PrpD; KEGG: rop:ROP_31310 hypothetical protein; MmgE/PrpD family protein 4423068..4424468 Pseudonocardia dioxanivorans CB1190 10365951 YP_004334127.1 CDS Psed_4111 NC_015312.1 4424465 4425649 D KEGG: fal:FRAAL3412 alpha-methylacyl-CoA racemase; PFAM: CoA-transferase III; formyl-CoA transferase 4424465..4425649 Pseudonocardia dioxanivorans CB1190 10365952 YP_004334128.1 CDS Psed_4112 NC_015312.1 4425689 4426840 D KEGG: sti:Sthe_1794 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 4425689..4426840 Pseudonocardia dioxanivorans CB1190 10365953 YP_004334129.1 CDS Psed_4113 NC_015312.1 4426882 4427391 D PFAM: MaoC-like dehydratase; KEGG: sti:Sthe_1792 MaoC domain protein dehydratase; acyl dehydratase MaoC 4426882..4427391 Pseudonocardia dioxanivorans CB1190 10365954 YP_004334130.1 CDS Psed_4114 NC_015312.1 4427489 4427839 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro05939 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4427489..4427839 Pseudonocardia dioxanivorans CB1190 10365955 YP_004334131.1 CDS Psed_4115 NC_015312.1 4427853 4428674 R PFAM: Protein of unknown function DUF2236; KEGG: sna:Snas_2225 hypothetical protein; hypothetical protein complement(4427853..4428674) Pseudonocardia dioxanivorans CB1190 10365956 YP_004334132.1 CDS Psed_4116 NC_015312.1 4428832 4430928 D KEGG: nda:Ndas_1369 ATPase AAA-2 domain protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; ATPase 4428832..4430928 Pseudonocardia dioxanivorans CB1190 10365957 YP_004334133.1 CDS Psed_4117 NC_015312.1 4430915 4432123 R KEGG: fri:FraEuI1c_4500 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(4430915..4432123) Pseudonocardia dioxanivorans CB1190 10365958 YP_004334134.1 CDS Psed_4118 NC_015312.1 4432113 4432454 R PFAM: YCII-related; KEGG: fri:FraEuI1c_4501 YCII-related protein; hypothetical protein complement(4432113..4432454) Pseudonocardia dioxanivorans CB1190 10365959 YP_004334135.1 CDS Psed_4119 NC_015312.1 4432632 4433075 D PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: amd:AMED_4721 activator of HSP90 ATPase; Activator of Hsp90 ATPase 1 family protein 4432632..4433075 Pseudonocardia dioxanivorans CB1190 10365960 YP_004334136.1 CDS Psed_4120 NC_015312.1 4433202 4434290 R PFAM: Domain of unknown function DUF125, transmembrane; KEGG: rop:ROP_21520 hypothetical membrane protein; hypothetical protein complement(4433202..4434290) Pseudonocardia dioxanivorans CB1190 10365961 YP_004334137.1 CDS Psed_4121 NC_015312.1 4434509 4435393 R KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein complement(4434509..4435393) Pseudonocardia dioxanivorans CB1190 10365962 YP_004334138.1 CDS Psed_4122 NC_015312.1 4435471 4437204 R KEGG: msm:MSMEG_6826 L-lactate permease; TIGRFAM: L-lactate permease; PFAM: L-lactate permease; L-lactate transport complement(4435471..4437204) Pseudonocardia dioxanivorans CB1190 10365963 YP_004334139.1 CDS Psed_4123 NC_015312.1 4437354 4438022 R PFAM: Nitroreductase-like; KEGG: srt:Srot_1543 nitroreductase; nitroreductase complement(4437354..4438022) Pseudonocardia dioxanivorans CB1190 10365964 YP_004334140.1 CDS Psed_4124 NC_015312.1 4438040 4439035 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; KEGG: avn:Avin_43690 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; 34-dihydroxy-2-butanone 4-phosphate synthase complement(4438040..4439035) Pseudonocardia dioxanivorans CB1190 10365965 YP_004334141.1 CDS Psed_4125 NC_015312.1 4439127 4439939 R PFAM: Alpha/beta hydrolase fold-1; KEGG: npu:Npun_R6557 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(4439127..4439939) Pseudonocardia dioxanivorans CB1190 10365966 YP_004334142.1 CDS Psed_4126 NC_015312.1 4440274 4441356 D PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: rxy:Rxyl_0351 alcohol dehydrogenase GroES-like protein; SMART: Polyketide synthase, enoylreductase; L-iditol 2-dehydrogenase 4440274..4441356 Pseudonocardia dioxanivorans CB1190 10365967 YP_004334143.1 CDS Psed_4127 NC_015312.1 4441388 4442182 D KEGG: bbe:BBR47_10970 glucose 1-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4441388..4442182 Pseudonocardia dioxanivorans CB1190 10365968 YP_004334144.1 CDS Psed_4128 NC_015312.1 4442482 4443819 D PFAM: Major facilitator superfamily MFS-1; KEGG: mta:Moth_2103 major facilitator transporter; major facilitator superfamily protein 4442482..4443819 Pseudonocardia dioxanivorans CB1190 10365969 YP_004334145.1 CDS Psed_4129 NC_015312.1 4443965 4444750 D PFAM: Alpha/beta hydrolase fold-1; KEGG: bur:Bcep18194_B1185 alpha/beta hydrolase; alpha/beta hydrolase 4443965..4444750 Pseudonocardia dioxanivorans CB1190 10365970 YP_004334146.1 CDS Psed_4130 NC_015312.1 4444747 4445508 D KEGG: cak:Caul_1939 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4444747..4445508 Pseudonocardia dioxanivorans CB1190 10365971 YP_004334147.1 CDS Psed_4131 NC_015312.1 4445542 4446792 D PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_0573 luciferase protein; luciferase-like protein 4445542..4446792 Pseudonocardia dioxanivorans CB1190 10365972 YP_004334148.1 CDS Psed_4132 NC_015312.1 4446912 4448855 D KEGG: gob:Gobs_4842 phytochrome sensor protein; PFAM: GAF; SMART: GAF; transcriptional regulator CdaR 4446912..4448855 Pseudonocardia dioxanivorans CB1190 10365973 YP_004334149.1 CDS Psed_4133 NC_015312.1 4448870 4450711 D KEGG: gob:Gobs_4842 phytochrome sensor protein; PFAM: GAF; SMART: GAF; GAF domain-containing protein 4448870..4450711 Pseudonocardia dioxanivorans CB1190 10365974 YP_004334150.1 CDS Psed_4134 NC_015312.1 4450771 4451727 D PFAM: Luciferase-like, subgroup; KEGG: fal:FRAAL4834 monooxygenase, FMN dependent; luciferase-like protein 4450771..4451727 Pseudonocardia dioxanivorans CB1190 10365975 YP_004334151.1 CDS Psed_4135 NC_015312.1 4451793 4452383 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL4715 TetR family transcriptional regulator; TetR family transcriptional regulator 4451793..4452383 Pseudonocardia dioxanivorans CB1190 10365976 YP_004334152.1 CDS Psed_4136 NC_015312.1 4452411 4453760 R KEGG: ami:Amir_3198 acyl transferase; hypothetical protein complement(4452411..4453760) Pseudonocardia dioxanivorans CB1190 10365977 YP_004334153.1 CDS Psed_4137 NC_015312.1 4453877 4454986 D KEGG: rer:RER_08310 zinc-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; L-threonine 3-dehydrogenase 4453877..4454986 Pseudonocardia dioxanivorans CB1190 10365978 YP_004334154.1 CDS Psed_4138 NC_015312.1 4454983 4456122 D KEGG: aac:Aaci_1851 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase 4454983..4456122 Pseudonocardia dioxanivorans CB1190 10365979 YP_004334155.1 CDS Psed_4139 NC_015312.1 4456119 4456364 R KEGG: nml:Namu_3832 hypothetical protein; hypothetical protein complement(4456119..4456364) Pseudonocardia dioxanivorans CB1190 10365980 YP_004334156.1 CDS Psed_4140 NC_015312.1 4456486 4459464 D KEGG: sro:Sros_1038 ATPase-like protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 4456486..4459464 Pseudonocardia dioxanivorans CB1190 10365981 YP_004334157.1 CDS Psed_4141 NC_015312.1 4459569 4460768 D PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_5175 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein 4459569..4460768 Pseudonocardia dioxanivorans CB1190 10365982 YP_004334158.1 CDS Psed_4142 NC_015312.1 4460818 4461438 R KEGG: amd:AMED_0662 hypothetical protein; hypothetical protein complement(4460818..4461438) Pseudonocardia dioxanivorans CB1190 10365983 YP_004334159.1 CDS Psed_4143 NC_015312.1 4461524 4462027 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gvi:glr3411 hypothetical protein; GCN5-like N-acetyltransferase complement(4461524..4462027) Pseudonocardia dioxanivorans CB1190 10365984 YP_004334160.1 CDS Psed_4144 NC_015312.1 4462054 4464627 R KEGG: ami:Amir_3228 osmosensitive K channel His kinase sensor; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; osmosensitive K channel His kinase sensor complement(4462054..4464627) Pseudonocardia dioxanivorans CB1190 10365985 YP_004334161.1 CDS Psed_4145 NC_015312.1 4464648 4465268 R HAMAP: Potassium transporting ATPase, C subunit; KEGG: sen:SACE_6087 potassium-transporting ATPase C chain; PFAM: Potassium transporting ATPase, C subunit; potassium-transporting ATPase subunit C complement(4464648..4465268) Pseudonocardia dioxanivorans CB1190 10365986 YP_004334162.1 CDS Psed_4146 NC_015312.1 4465270 4467375 R PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: sen:SACE_6088 potassium-transporting ATPase B chain; potassium-transporting ATPase subunit B complement(4465270..4467375) Pseudonocardia dioxanivorans CB1190 10365987 YP_004334163.1 CDS Psed_4147 NC_015312.1 4467372 4469033 R PFAM: ATPase, K+ transporting, A subunit; TIGRFAM: ATPase, K+ transporting, A subunit; HAMAP: ATPase, K+ transporting, A subunit; KEGG: sen:SACE_6089 potassium-transporting ATPase subunit A; Potassium-transporting ATPase subunit A complement(4467372..4469033) Pseudonocardia dioxanivorans CB1190 10365988 YP_004334164.1 CDS Psed_4148 NC_015312.1 4469033 4469134 R TIGRFAM: ATPase, P-type, K+-transporting, F subunit; PFAM: ATPase, P-type, K+-transporting, F subunit; K+-transporting ATPase subunit F complement(4469033..4469134) Pseudonocardia dioxanivorans CB1190 10365989 YP_004334165.1 CDS Psed_4149 NC_015312.1 4469131 4469301 R hypothetical protein complement(4469131..4469301) Pseudonocardia dioxanivorans CB1190 10365990 YP_004334166.1 CDS Psed_4150 NC_015312.1 4469460 4470521 R KEGG: bra:BRADO2458 3-isopropylmalate dehydrogenase (LeuB); PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(4469460..4470521) Pseudonocardia dioxanivorans CB1190 10365991 YP_004334167.1 CDS Psed_4151 NC_015312.1 4470584 4471285 R KEGG: gbr:Gbro_2862 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator complement(4470584..4471285) Pseudonocardia dioxanivorans CB1190 10365992 YP_004334168.1 CDS Psed_4152 NC_015312.1 4471543 4472907 D PFAM: Amidase; KEGG: rca:Rcas_2243 amidase; amidase 4471543..4472907 Pseudonocardia dioxanivorans CB1190 10365993 YP_004334169.1 CDS Psed_4153 NC_015312.1 4472952 4474196 D KEGG: sgr:SGR_5476 acyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 4472952..4474196 Pseudonocardia dioxanivorans CB1190 10365994 YP_004334170.1 CDS Psed_4154 NC_015312.1 4474226 4475632 D KEGG: ctc:CTC01781 phenylhydantoinase; PFAM: Amidohydrolase 1; dihydropyrimidinase 4474226..4475632 Pseudonocardia dioxanivorans CB1190 10365995 YP_004334171.1 CDS Psed_4155 NC_015312.1 4475638 4476327 D KEGG: rxy:Rxyl_2747 N-carbamoylsarcosine amidase; PFAM: Isochorismatase-like; N-carbamoylsarcosine amidase 4475638..4476327 Pseudonocardia dioxanivorans CB1190 10365996 YP_004334172.1 CDS Psed_4156 NC_015312.1 4476324 4477364 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: afw:Anae109_2774 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 4476324..4477364 Pseudonocardia dioxanivorans CB1190 10365997 YP_004334173.1 CDS Psed_4157 NC_015312.1 4477446 4478633 R PFAM: Major facilitator superfamily MFS-1; KEGG: nca:Noca_0030 major facilitator transporter; major facilitator superfamily protein complement(4477446..4478633) Pseudonocardia dioxanivorans CB1190 10365998 YP_004334174.1 CDS Psed_4158 NC_015312.1 4478864 4479853 D KEGG: hvo:HVO_A0568 hydroxymethylglutaryl-CoA lyase; PFAM: Pyruvate carboxyltransferase; Hydroxymethylglutaryl-CoA lyase 4478864..4479853 Pseudonocardia dioxanivorans CB1190 10365999 YP_004334175.1 CDS Psed_4159 NC_015312.1 4479895 4480911 R PFAM: NADP-dependent oxidoreductase domain; KEGG: scl:sce2610 oxidoreductase; NADP-dependent oxidoreductase domain-containing protein complement(4479895..4480911) Pseudonocardia dioxanivorans CB1190 10366000 YP_004334176.1 CDS Psed_4160 NC_015312.1 4480908 4482080 R PFAM: Major facilitator superfamily MFS-1; KEGG: rfr:Rfer_4176 major facilitator transporter; major facilitator superfamily protein complement(4480908..4482080) Pseudonocardia dioxanivorans CB1190 10366001 YP_004334177.1 CDS Psed_4161 NC_015312.1 4482137 4483252 R PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease complement(4482137..4483252) Pseudonocardia dioxanivorans CB1190 10366002 YP_004334178.1 CDS Psed_4162 NC_015312.1 4483249 4484811 R PFAM: ABC transporter-like; KEGG: nca:Noca_0100 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase complement(4483249..4484811) Pseudonocardia dioxanivorans CB1190 10366003 YP_004334179.1 CDS Psed_4163 NC_015312.1 4484921 4486102 R KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein complement(4484921..4486102) Pseudonocardia dioxanivorans CB1190 10366004 YP_004334180.1 CDS Psed_4164 NC_015312.1 4486721 4488166 R KEGG: art:Arth_4066 dihydropyrimidinase; PFAM: Amidohydrolase 1; dihydropyrimidinase complement(4486721..4488166) Pseudonocardia dioxanivorans CB1190 10366005 YP_004334181.1 CDS Psed_4165 NC_015312.1 4488179 4488916 R KEGG: bph:Bphy_6346 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator complement(4488179..4488916) Pseudonocardia dioxanivorans CB1190 10366006 YP_004334182.1 CDS Psed_4166 NC_015312.1 4488973 4490250 R KEGG: bbr:BB0695 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; Cupin 2, conserved barrel; chitin deacetylase complement(4488973..4490250) Pseudonocardia dioxanivorans CB1190 10366007 YP_004334183.1 CDS Psed_4167 NC_015312.1 4490247 4491041 R PFAM: Alpha/beta hydrolase fold-1; KEGG: cti:RALTA_A2298 hydrolase; 3-oxoadipate enol-lactonase; alpha/beta hydrolase complement(4490247..4491041) Pseudonocardia dioxanivorans CB1190 10366008 YP_004334184.1 CDS Psed_4168 NC_015312.1 4491038 4491886 R KEGG: pth:PTH_1335 citrate lyase beta subunit; PFAM: Aldehyde-lyase domain; citryl-CoA lyase complement(4491038..4491886) Pseudonocardia dioxanivorans CB1190 10366009 YP_004334185.1 CDS Psed_4169 NC_015312.1 4491883 4493565 R HAMAP: Dihydroxy-acid dehydratase; KEGG: rxy:Rxyl_1326 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(4491883..4493565) Pseudonocardia dioxanivorans CB1190 10366010 YP_004334186.1 CDS Psed_4170 NC_015312.1 4493592 4494623 R PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; ABC transporter permease complement(4493592..4494623) Pseudonocardia dioxanivorans CB1190 10366011 YP_004334187.1 CDS Psed_4171 NC_015312.1 4494620 4496254 R PFAM: ABC transporter-like; KEGG: nca:Noca_0100 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase complement(4494620..4496254) Pseudonocardia dioxanivorans CB1190 10366012 YP_004334188.1 CDS Psed_4172 NC_015312.1 4496254 4497429 R KEGG: nca:Noca_0099 ABC-type sugar transport system periplasmic component-like; sugar ABC transporter substrate-binding protein complement(4496254..4497429) Pseudonocardia dioxanivorans CB1190 10366013 YP_004334189.1 CDS Psed_4173 NC_015312.1 4497460 4498113 R PFAM: Isochorismatase-like; KEGG: cag:Cagg_3089 N-carbamoylsarcosine amidase; isochorismatase hydrolase complement(4497460..4498113) Pseudonocardia dioxanivorans CB1190 10366014 YP_004334190.1 CDS Psed_4174 NC_015312.1 4498125 4499321 R KEGG: rxy:Rxyl_0365 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase complement(4498125..4499321) Pseudonocardia dioxanivorans CB1190 10366015 YP_004334191.1 CDS Psed_4175 NC_015312.1 4499467 4500408 R KEGG: bbr:BB0695 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; chitin deacetylase complement(4499467..4500408) Pseudonocardia dioxanivorans CB1190 10366016 YP_004334192.1 CDS Psed_4176 NC_015312.1 4500530 4501204 R KEGG: msm:MSMEG_6300 transcriptional regulator, GntR family protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4500530..4501204) Pseudonocardia dioxanivorans CB1190 10366017 YP_004334193.1 CDS Psed_4177 NC_015312.1 4501671 4502438 R KEGG: amd:AMED_5017 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(4501671..4502438) Pseudonocardia dioxanivorans CB1190 10366018 YP_004334194.1 CDS Psed_4178 NC_015312.1 4502479 4503384 D SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Acetaldehyde dehydrogenase; KEGG: amd:AMED_4219 acetaldehyde dehydrogenase; PFAM: Acetaldehyde dehydrogenase, C-terminal; Semialdehyde dehydrogenase, NAD-binding; acetaldehyde dehydrogenase 4502479..4503384 Pseudonocardia dioxanivorans CB1190 10366019 YP_004334195.1 CDS Psed_4179 NC_015312.1 4503381 4504415 D TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; KEGG: amd:AMED_4220 4-hydroxy-2-ketovalerate aldolase; PFAM: Pyruvate carboxyltransferase; DmpG-like communication; 4-hydroxy-2-oxovalerate aldolase 4503381..4504415 Pseudonocardia dioxanivorans CB1190 10366020 YP_004334196.1 CDS Psed_4180 NC_015312.1 4504935 4505204 R hypothetical protein complement(4504935..4505204) Pseudonocardia dioxanivorans CB1190 10366021 YP_004334197.1 CDS Psed_4181 NC_015312.1 4505201 4506316 R PFAM: Methyltransferase type 11; KEGG: mau:Micau_3737 methyltransferase; type 11 methyltransferase complement(4505201..4506316) Pseudonocardia dioxanivorans CB1190 10366022 YP_004334198.1 CDS Psed_4182 NC_015312.1 4506338 4507207 R PFAM: Alpha/beta hydrolase fold-1; KEGG: mau:Micau_3745 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(4506338..4507207) Pseudonocardia dioxanivorans CB1190 10366023 YP_004334199.1 CDS Psed_4183 NC_015312.1 4507204 4508586 R PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: mau:Micau_3744 peptidase M20; peptidase M20 complement(4507204..4508586) Pseudonocardia dioxanivorans CB1190 10366024 YP_004334200.1 CDS Psed_4184 NC_015312.1 4508580 4511453 R KEGG: mau:Micau_3736 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; NADPH dehydrogenase complement(4508580..4511453) Pseudonocardia dioxanivorans CB1190 10366025 YP_004334201.1 CDS Psed_4185 NC_015312.1 4511626 4512480 D KEGG: rxy:Rxyl_0364 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4511626..4512480 Pseudonocardia dioxanivorans CB1190 10366026 YP_004334202.1 CDS Psed_4186 NC_015312.1 4512723 4514744 D KEGG: mil:ML5_4663 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 2,4-dienoyl-CoA reductase 4512723..4514744 Pseudonocardia dioxanivorans CB1190 10366027 YP_004334203.1 CDS Psed_4187 NC_015312.1 4514873 4515955 D PFAM: Methyltransferase type 11; KEGG: mau:Micau_3737 methyltransferase; type 11 methyltransferase 4514873..4515955 Pseudonocardia dioxanivorans CB1190 10366028 YP_004334204.1 CDS Psed_4188 NC_015312.1 4515955 4516266 D KEGG: mil:ML5_4661 hypothetical protein; hypothetical protein 4515955..4516266 Pseudonocardia dioxanivorans CB1190 10366029 YP_004334205.1 CDS Psed_4189 NC_015312.1 4516266 4516679 D KEGG: mil:ML5_4660 hypothetical protein; hypothetical protein 4516266..4516679 Pseudonocardia dioxanivorans CB1190 10366030 YP_004334206.1 CDS Psed_4190 NC_015312.1 4516676 4517803 D KEGG: mil:ML5_4659 nmt1/thi5 like domain protein; nmt1/thi5 like domain-containing protein 4516676..4517803 Pseudonocardia dioxanivorans CB1190 10366031 YP_004334207.1 CDS Psed_4191 NC_015312.1 4517851 4518681 D PFAM: ABC transporter-like; KEGG: mil:ML5_4658 abc transporter related protein; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 4517851..4518681 Pseudonocardia dioxanivorans CB1190 10366032 YP_004334208.1 CDS Psed_4192 NC_015312.1 4518712 4519578 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mil:ML5_4657 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 4518712..4519578 Pseudonocardia dioxanivorans CB1190 10366033 YP_004334209.1 CDS Psed_4193 NC_015312.1 4519575 4520324 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mil:ML5_4656 short-chain dehydrogenase/reductase sdr; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 4519575..4520324 Pseudonocardia dioxanivorans CB1190 10366034 YP_004334210.1 CDS Psed_4194 NC_015312.1 4520368 4521786 D PFAM: Peptidase M20, dimerisation; Peptidase M20; KEGG: mil:ML5_4655 peptidase M20; peptidase dimerization domain-containing protein 4520368..4521786 Pseudonocardia dioxanivorans CB1190 10366035 YP_004334211.1 CDS Psed_4195 NC_015312.1 4521783 4522613 D PFAM: Alpha/beta hydrolase fold-1; KEGG: mau:Micau_3745 alpha/beta hydrolase fold protein; alpha/beta hydrolase 4521783..4522613 Pseudonocardia dioxanivorans CB1190 10366036 YP_004334212.1 CDS Psed_4196 NC_015312.1 4522610 4523050 D KEGG: mil:ML5_4653 peroxiredoxin, ohr subfamily; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein; peroxiredoxin 4522610..4523050 Pseudonocardia dioxanivorans CB1190 10366037 YP_004334213.1 CDS Psed_4197 NC_015312.1 4523047 4523910 D KEGG: mil:ML5_4651 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 4523047..4523910 Pseudonocardia dioxanivorans CB1190 10366038 YP_004334214.1 CDS Psed_4198 NC_015312.1 4523907 4525175 D KEGG: mau:Micau_3749 formyl-CoA transferase; PFAM: CoA-transferase III; formyl-CoA transferase 4523907..4525175 Pseudonocardia dioxanivorans CB1190 10366039 YP_004334215.1 CDS Psed_4199 NC_015312.1 4525204 4526046 D PFAM: cyclase; KEGG: nca:Noca_4084 cyclase protein; cyclase 4525204..4526046 Pseudonocardia dioxanivorans CB1190 10366040 YP_004334216.1 CDS Psed_4200 NC_015312.1 4526039 4527487 D PFAM: MmgE/PrpD; KEGG: mil:ML5_4648 MmgE/PrpD family protein; MmgE/PrpD family protein 4526039..4527487 Pseudonocardia dioxanivorans CB1190 10366041 YP_004334217.1 CDS Psed_4201 NC_015312.1 4527490 4528956 D KEGG: mil:ML5_4647 amidohydrolase; PFAM: Amidohydrolase 1; allantoinase 4527490..4528956 Pseudonocardia dioxanivorans CB1190 10366042 YP_004334218.1 CDS Psed_4202 NC_015312.1 4528962 4529819 D PFAM: Aldehyde-lyase domain; KEGG: mau:Micau_3753 HpcH/HpaI aldolase; HpcH/HpaI aldolase 4528962..4529819 Pseudonocardia dioxanivorans CB1190 10366043 YP_004334219.1 CDS Psed_4203 NC_015312.1 4529895 4530278 D PFAM: Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 4529895..4530278 Pseudonocardia dioxanivorans CB1190 10366044 YP_004334220.1 CDS Psed_4204 NC_015312.1 4530335 4530757 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kra:Krad_4270 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4530335..4530757 Pseudonocardia dioxanivorans CB1190 10366045 YP_004334221.1 CDS Psed_4205 NC_015312.1 4530764 4531366 R PFAM: Nitroreductase-like; KEGG: has:Halsa_0298 nitroreductase; nitroreductase complement(4530764..4531366) Pseudonocardia dioxanivorans CB1190 10366046 YP_004334222.1 CDS Psed_4206 NC_015312.1 4531363 4531692 R hypothetical protein complement(4531363..4531692) Pseudonocardia dioxanivorans CB1190 10366047 YP_004334223.1 CDS Psed_4207 NC_015312.1 4532171 4533193 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: sti:Sthe_0116 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 4532171..4533193 Pseudonocardia dioxanivorans CB1190 10366048 YP_004334224.1 CDS Psed_4208 NC_015312.1 4533202 4533558 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tbi:Tbis_1970 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 4533202..4533558 Pseudonocardia dioxanivorans CB1190 10366049 YP_004334225.1 CDS Psed_4209 NC_015312.1 4533599 4534030 D KEGG: nda:Ndas_1607 F420-dependent enzyme; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; F420-dependent protein 4533599..4534030 Pseudonocardia dioxanivorans CB1190 10366050 YP_004334226.1 CDS Psed_4210 NC_015312.1 4534027 4535130 R PFAM: Major facilitator superfamily MFS-1; KEGG: kfl:Kfla_4810 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(4534027..4535130) Pseudonocardia dioxanivorans CB1190 10366051 YP_004334227.1 CDS Psed_4211 NC_015312.1 4535271 4536041 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rha:RHA1_ro00483 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4535271..4536041) Pseudonocardia dioxanivorans CB1190 10366052 YP_004334228.1 CDS Psed_4212 NC_015312.1 4536114 4537508 R TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; KEGG: fre:Franean1_5222 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tyrosyl-tRNA synthetase complement(4536114..4537508) Pseudonocardia dioxanivorans CB1190 10366053 YP_004334229.1 CDS Psed_4213 NC_015312.1 4537646 4538509 D PFAM: Alpha/beta hydrolase fold-1; KEGG: sgr:SGR_1000 hydrolase; alpha/beta hydrolase 4537646..4538509 Pseudonocardia dioxanivorans CB1190 10366054 YP_004334230.1 CDS Psed_4214 NC_015312.1 4538601 4539749 R KEGG: rop:ROP_28170 CaiB/BaiF family protein; PFAM: CoA-transferase III; formyl-CoA transferase complement(4538601..4539749) Pseudonocardia dioxanivorans CB1190 10366055 YP_004334231.1 CDS Psed_4215 NC_015312.1 4539813 4540370 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: fre:Franean1_3648 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 4539813..4540370 Pseudonocardia dioxanivorans CB1190 10366056 YP_004334232.1 CDS Psed_4216 NC_015312.1 4540715 4541371 D PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein 4540715..4541371 Pseudonocardia dioxanivorans CB1190 10366058 YP_004334233.1 CDS Psed_4217 NC_015312.1 4541511 4541813 D hypothetical protein 4541511..4541813 Pseudonocardia dioxanivorans CB1190 10366059 YP_004334234.1 CDS Psed_4218 NC_015312.1 4541873 4543483 R PFAM: Monooxygenase, FAD-binding; KEGG: sen:SACE_3057 pentachlorophenol monooxygenase; monooxygenase FAD-binding protein complement(4541873..4543483) Pseudonocardia dioxanivorans CB1190 10366060 YP_004334235.1 CDS Psed_4219 NC_015312.1 4543517 4544476 R KEGG: amd:AMED_5254 beta-lactamase class B; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(4543517..4544476) Pseudonocardia dioxanivorans CB1190 10366061 YP_004334236.1 CDS Psed_4220 NC_015312.1 4544691 4545689 D PFAM: Luciferase-like, subgroup; KEGG: hje:HacjB3_02270 luciferase-like monooxygenase; luciferase-like protein 4544691..4545689 Pseudonocardia dioxanivorans CB1190 10366062 YP_004334237.1 CDS Psed_4221 NC_015312.1 4545783 4547426 D KEGG: mbt:JTY_1088 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 4545783..4547426 Pseudonocardia dioxanivorans CB1190 10366063 YP_004334238.1 CDS Psed_4222 NC_015312.1 4547561 4548940 D PFAM: Major facilitator superfamily MFS-1; KEGG: nda:Ndas_2798 metabolite/H+ symporter, major facilitator superfamily (MFS); major facilitator superfamily protein 4547561..4548940 Pseudonocardia dioxanivorans CB1190 10366064 YP_004334239.1 CDS Psed_4223 NC_015312.1 4549010 4549489 D PFAM: Helix-turn-helix, HxlR type; KEGG: gbr:Gbro_0274 helix-turn-helix domain-containing protein; HxlR family transcriptional regulator 4549010..4549489 Pseudonocardia dioxanivorans CB1190 10366065 YP_004334240.1 CDS Psed_4224 NC_015312.1 4549660 4550166 D PFAM: Polyketide cyclase/dehydrase; KEGG: sma:SAV_7402 cyclase/dehydrase; polyketide cyclase/dehydrase 4549660..4550166 Pseudonocardia dioxanivorans CB1190 10366066 YP_004334241.1 CDS Psed_4225 NC_015312.1 4550166 4551209 D PFAM: Luciferase-like, subgroup; KEGG: amd:AMED_7646 FMN-dependent monooxygenase; luciferase-like protein 4550166..4551209 Pseudonocardia dioxanivorans CB1190 10366067 YP_004334242.1 CDS Psed_4227 NC_015312.1 4551602 4552147 D KEGG: rop:ROP_04590 hypothetical protein; hypothetical protein 4551602..4552147 Pseudonocardia dioxanivorans CB1190 10366069 YP_004334243.1 CDS Psed_4228 NC_015312.1 4552193 4552672 D PFAM: Protein of unknown function DUF421; KEGG: rop:ROP_04580 hypothetical membrane protein; hypothetical protein 4552193..4552672 Pseudonocardia dioxanivorans CB1190 10366070 YP_004334244.1 CDS Psed_4229 NC_015312.1 4552733 4555186 D KEGG: nda:Ndas_4662 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; nitrate reductase 4552733..4555186 Pseudonocardia dioxanivorans CB1190 10366071 YP_004334245.1 CDS Psed_4230 NC_015312.1 4555183 4555665 D KEGG: amd:AMED_6557 hypothetical protein; hypothetical protein 4555183..4555665 Pseudonocardia dioxanivorans CB1190 10366072 YP_004334246.1 CDS Psed_4231 NC_015312.1 4555742 4556593 D KEGG: cwo:Cwoe_0784 PGAP1 family protein; PGAP1 family protein 4555742..4556593 Pseudonocardia dioxanivorans CB1190 10366073 YP_004334247.1 CDS Psed_4232 NC_015312.1 4556628 4557617 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mil:ML5_3028 short-chain dehydrogenase/reductase sdr; short-chain dehydrogenase/reductase SDR 4556628..4557617 Pseudonocardia dioxanivorans CB1190 10366074 YP_004334248.1 CDS Psed_4233 NC_015312.1 4557680 4558927 R KEGG: ami:Amir_3121 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase complement(4557680..4558927) Pseudonocardia dioxanivorans CB1190 10366075 YP_004334249.1 CDS Psed_4234 NC_015312.1 4559178 4559666 D KEGG: amd:AMED_4259 hypothetical protein; hypothetical protein 4559178..4559666 Pseudonocardia dioxanivorans CB1190 10366076 YP_004334250.1 CDS Psed_4235 NC_015312.1 4559850 4561196 R PFAM: Serine/threonine-protein kinase-like domain; KEGG: amd:AMED_3149 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase complement(4559850..4561196) Pseudonocardia dioxanivorans CB1190 10366077 YP_004334251.1 CDS Psed_4236 NC_015312.1 4561551 4562729 D KEGG: bwe:BcerKBAB4_5427 ATPase; hypothetical protein 4561551..4562729 Pseudonocardia dioxanivorans CB1190 10366078 YP_004334252.1 CDS Psed_4237 NC_015312.1 4562780 4563724 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rop:ROP_pKNR-00040 plasmid partitioning protein ParA; Cobyrinic acid ac-diamide synthase 4562780..4563724 Pseudonocardia dioxanivorans CB1190 10366079 YP_004334253.1 CDS Psed_4238 NC_015312.1 4563721 4564380 D hypothetical protein 4563721..4564380 Pseudonocardia dioxanivorans CB1190 10366080 YP_004334254.1 CDS Psed_4239 NC_015312.1 4564465 4564836 D PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: amd:AMED_5888 anti-anti-sigma factor; sulfate transporter/antisigma-factor antagonist STAS 4564465..4564836 Pseudonocardia dioxanivorans CB1190 10366081 YP_004334255.1 CDS Psed_4240 NC_015312.1 4564840 4566441 D KEGG: amd:AMED_5889 GAF domain-containing serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; SMART: Protein phosphatase 2C-like; GAF; GAF sensor-containing protein serine/threonine phosphatase 4564840..4566441 Pseudonocardia dioxanivorans CB1190 10366082 YP_004334256.1 CDS Psed_4241 NC_015312.1 4566526 4566825 R KEGG: sen:SACE_0974 gas vesicle synthesis-like protein; HAMAP: Gas vesicle structural protein; PFAM: Gas vesicle protein GvpA; gas vesicle structural protein complement(4566526..4566825) Pseudonocardia dioxanivorans CB1190 10366083 YP_004334257.1 CDS Psed_4242 NC_015312.1 4566955 4567386 R PFAM: Domain of unknown function DUF336; KEGG: pzu:PHZ_c2132 hypothetical protein; hypothetical protein complement(4566955..4567386) Pseudonocardia dioxanivorans CB1190 10366084 YP_004334258.1 CDS Psed_4243 NC_015312.1 4567672 4568550 D PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal; KEGG: sen:SACE_3137 repressor in the phenylacetic acid catabolism; PaaX family transcriptional regulator 4567672..4568550 Pseudonocardia dioxanivorans CB1190 10366085 YP_004334259.1 CDS Psed_4244 NC_015312.1 4568575 4569300 R PFAM: Alpha/beta hydrolase fold-1; KEGG: aci:ACIAD1426 salicylate esterase; alpha/beta hydrolase complement(4568575..4569300) Pseudonocardia dioxanivorans CB1190 10366086 YP_004334260.1 CDS Psed_4245 NC_015312.1 4569456 4570373 R KEGG: xce:Xcel_0312 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(4569456..4570373) Pseudonocardia dioxanivorans CB1190 10366087 YP_004334261.1 CDS Psed_4246 NC_015312.1 4570417 4572084 R KEGG: amd:AMED_3360 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; Benzoate--CoA ligase complement(4570417..4572084) Pseudonocardia dioxanivorans CB1190 10366088 YP_004334262.1 CDS Psed_4247 NC_015312.1 4572081 4573088 R KEGG: bgf:BC1003_4453 nitrilase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase complement(4572081..4573088) Pseudonocardia dioxanivorans CB1190 10366089 YP_004334263.1 CDS Psed_4248 NC_015312.1 4573094 4575340 R KEGG: nfa:nfa12450 salicylyl-CoA 5-hydroxylase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADPH dehydrogenase complement(4573094..4575340) Pseudonocardia dioxanivorans CB1190 10366090 YP_004334264.1 CDS Psed_4249 NC_015312.1 4575444 4576556 D PFAM: Cupin 2, conserved barrel; KEGG: bgf:BC1003_4454 cupin 2 conserved barrel domain-containing protein; cupin 4575444..4576556 Pseudonocardia dioxanivorans CB1190 10366091 YP_004334265.1 CDS Psed_4250 NC_015312.1 4576570 4577406 D KEGG: swi:Swit_0820 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 4576570..4577406 Pseudonocardia dioxanivorans CB1190 10366092 YP_004334266.1 CDS Psed_4251 NC_015312.1 4577403 4578200 D PFAM: Asp/Glu/hydantoin racemase; KEGG: apt:APA01_23730 Asp/Glu racemase; Asp/Glu/hydantoin racemase 4577403..4578200 Pseudonocardia dioxanivorans CB1190 10366093 YP_004334267.1 CDS Psed_4252 NC_015312.1 4578197 4578637 D PFAM: Thioesterase superfamily; KEGG: aau:AAur_4027 thioesterase protein; thioesterase 4578197..4578637 Pseudonocardia dioxanivorans CB1190 10366094 YP_004334268.1 CDS Psed_4253 NC_015312.1 4578613 4579965 R KEGG: cai:Caci_6602 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; beta-Ala-His dipeptidase complement(4578613..4579965) Pseudonocardia dioxanivorans CB1190 10366095 YP_004334269.1 CDS Psed_4254 NC_015312.1 4580198 4580503 R hypothetical protein complement(4580198..4580503) Pseudonocardia dioxanivorans CB1190 10366096 YP_004334270.1 CDS Psed_4255 NC_015312.1 4580523 4580747 R hypothetical protein complement(4580523..4580747) Pseudonocardia dioxanivorans CB1190 10366097 YP_004334271.1 CDS Psed_4256 NC_015312.1 4580839 4583397 R KEGG: amd:AMED_3903 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: Transcription regulator LuxR, C-terminal; ATPase, AAA+ type, core; LuxR family transcriptional regulator complement(4580839..4583397) Pseudonocardia dioxanivorans CB1190 10366098 YP_004334272.1 CDS Psed_4257 NC_015312.1 4583450 4586062 R KEGG: amd:AMED_3903 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(4583450..4586062) Pseudonocardia dioxanivorans CB1190 10366099 YP_004334273.1 CDS Psed_4258 NC_015312.1 4586223 4586492 D hypothetical protein 4586223..4586492 Pseudonocardia dioxanivorans CB1190 10366100 YP_004334274.1 CDS Psed_4259 NC_015312.1 4586576 4587793 R PFAM: Uncharacterised protein family UPF0118; KEGG: amd:AMED_3910 hypothetical protein; hypothetical protein complement(4586576..4587793) Pseudonocardia dioxanivorans CB1190 10366101 YP_004334275.1 CDS Psed_4260 NC_015312.1 4587851 4589131 R PFAM: Diacylglycerol kinase, catalytic domain; KEGG: fal:FRAAL5417 hypothetical protein; diacylglycerol kinase catalytic subunit complement(4587851..4589131) Pseudonocardia dioxanivorans CB1190 10366102 YP_004334276.1 CDS Psed_4261 NC_015312.1 4589236 4589655 R KEGG: sen:SACE_3236 integral membrane protein; hypothetical protein complement(4589236..4589655) Pseudonocardia dioxanivorans CB1190 10366103 YP_004334277.1 CDS Psed_4262 NC_015312.1 4589652 4590167 R PFAM: RDD; KEGG: rop:ROP_35210 hypothetical membrane protein; RDD domain-containing protein complement(4589652..4590167) Pseudonocardia dioxanivorans CB1190 10366104 YP_004334278.1 CDS Psed_4263 NC_015312.1 4590194 4591033 R KEGG: nml:Namu_5192 hypothetical protein; hypothetical protein complement(4590194..4591033) Pseudonocardia dioxanivorans CB1190 10366105 YP_004334279.1 CDS Psed_4264 NC_015312.1 4591187 4592155 D KEGG: mar:MAE_61320 hypothetical protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related; polyphosphate:nucleotide phosphotransferase 4591187..4592155 Pseudonocardia dioxanivorans CB1190 10366106 YP_004334280.1 CDS Psed_4265 NC_015312.1 4592169 4594889 D SMART: ATPase, P-type cation-transporter, N-terminal; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: nml:Namu_4121 ATPase; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; ATPase 4592169..4594889 Pseudonocardia dioxanivorans CB1190 10366107 YP_004334281.1 CDS Psed_4266 NC_015312.1 4594886 4596646 D KEGG: nml:Namu_3444 sulfate transporter; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; sulfate transporter 4594886..4596646 Pseudonocardia dioxanivorans CB1190 10366108 YP_004334282.1 CDS Psed_4267 NC_015312.1 4596724 4597608 D KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 4596724..4597608 Pseudonocardia dioxanivorans CB1190 10366109 YP_004334283.1 CDS Psed_4268 NC_015312.1 4597763 4598287 R PFAM: Uncharacterised conserved protein UCP014873, membrane associated; KEGG: nfa:nfa32860 hypothetical protein; hypothetical protein complement(4597763..4598287) Pseudonocardia dioxanivorans CB1190 10366110 YP_004334284.1 CDS Psed_4269 NC_015312.1 4598512 4599003 D PFAM: Ion transport 2; KEGG: nml:Namu_2957 ion transport 2 domain-containing protein; Ion transport 2 domain-containing protein 4598512..4599003 Pseudonocardia dioxanivorans CB1190 10366111 YP_004334285.1 CDS Psed_4270 NC_015312.1 4599206 4599757 D KEGG: cai:Caci_6592 hypothetical protein; hypothetical protein 4599206..4599757 Pseudonocardia dioxanivorans CB1190 10366112 YP_004334286.1 CDS Psed_4271 NC_015312.1 4599938 4600312 D hypothetical protein 4599938..4600312 Pseudonocardia dioxanivorans CB1190 10366113 YP_004334287.1 CDS Psed_4272 NC_015312.1 4600309 4600473 D hypothetical protein 4600309..4600473 Pseudonocardia dioxanivorans CB1190 10366114 YP_004334288.1 CDS Psed_4273 NC_015312.1 4600476 4600988 R hypothetical protein complement(4600476..4600988) Pseudonocardia dioxanivorans CB1190 10366115 YP_004334289.1 CDS Psed_4274 NC_015312.1 4600985 4601548 R KEGG: nfa:nfa23360 hypothetical protein; hypothetical protein complement(4600985..4601548) Pseudonocardia dioxanivorans CB1190 10366116 YP_004334290.1 CDS Psed_4275 NC_015312.1 4601539 4602213 R KEGG: amd:AMED_9148 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(4601539..4602213) Pseudonocardia dioxanivorans CB1190 10366117 YP_004334291.1 CDS Psed_4276 NC_015312.1 4602827 4603357 R KEGG: nml:Namu_0789 hypothetical protein; hypothetical protein complement(4602827..4603357) Pseudonocardia dioxanivorans CB1190 10366118 YP_004334292.1 CDS Psed_4277 NC_015312.1 4603510 4604892 D KEGG: sma:SAV_1927 integral membrane protein; hypothetical protein 4603510..4604892 Pseudonocardia dioxanivorans CB1190 10366119 YP_004334293.1 CDS Psed_4278 NC_015312.1 4604892 4605455 D TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: mjl:Mjls_3183 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 4604892..4605455 Pseudonocardia dioxanivorans CB1190 10366120 YP_004334294.1 CDS Psed_4279 NC_015312.1 4605490 4606977 D PFAM: Protein of unknown function DUF2252; KEGG: sgr:SGR_6314 hypothetical protein; hypothetical protein 4605490..4606977 Pseudonocardia dioxanivorans CB1190 10366121 YP_004334295.1 CDS Psed_4280 NC_015312.1 4607317 4608666 R PFAM: Major facilitator superfamily MFS-1; KEGG: rop:ROP_33170 vanillate transporter; major facilitator superfamily protein complement(4607317..4608666) Pseudonocardia dioxanivorans CB1190 10366122 YP_004334296.1 CDS Psed_4281 NC_015312.1 4608781 4610304 R KEGG: gob:Gobs_2395 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; aldehyde dehydrogenase complement(4608781..4610304) Pseudonocardia dioxanivorans CB1190 10366123 YP_004334297.1 CDS Psed_4282 NC_015312.1 4610364 4610705 R PFAM: 4Fe-4S binding domain; KEGG: ace:Acel_0499 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(4610364..4610705) Pseudonocardia dioxanivorans CB1190 10366124 YP_004334298.1 CDS Psed_4283 NC_015312.1 4610723 4611727 R HAMAP: Ferredoxin--NADP reductase, type 2; KEGG: mil:ML5_1109 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin-NADP reductase complement(4610723..4611727) Pseudonocardia dioxanivorans CB1190 10366125 YP_004334299.1 CDS Psed_4284 NC_015312.1 4611724 4612797 R PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: nca:Noca_2142 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B complement(4611724..4612797) Pseudonocardia dioxanivorans CB1190 10366126 YP_004334300.1 CDS Psed_4285 NC_015312.1 4612931 4613764 D KEGG: ajs:Ajs_4284 hydratase/decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase 4612931..4613764 Pseudonocardia dioxanivorans CB1190 10366127 YP_004334301.1 CDS Psed_4286 NC_015312.1 4613780 4614568 R KEGG: nfa:nfa33170 transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(4613780..4614568) Pseudonocardia dioxanivorans CB1190 10366128 YP_004334302.1 CDS Psed_4287 NC_015312.1 4614579 4615868 R KEGG: ppf:Pput_2898 ring hydroxylating dioxygenase, alpha subunit; PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal; Rieske [2Fe-2S] iron-sulphur domain; 2-chlorobenzoate 1,2-dioxygenase complement(4614579..4615868) Pseudonocardia dioxanivorans CB1190 10366129 YP_004334303.1 CDS Psed_4288 NC_015312.1 4615885 4616868 R PFAM: Amidohydrolase 2; KEGG: bam:Bamb_4307 aminocarboxymuconate-semialdehyde decarboxylase; amidohydrolase complement(4615885..4616868) Pseudonocardia dioxanivorans CB1190 10366130 YP_004334304.1 CDS Psed_4289 NC_015312.1 4616879 4617391 R PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: rop:ROP_46330 p-cumate dioxygenase small subunit; aromatic-ring-hydroxylating dioxygenase subunit beta complement(4616879..4617391) Pseudonocardia dioxanivorans CB1190 10366131 YP_004334305.1 CDS Psed_4290 NC_015312.1 4617388 4618092 R KEGG: sen:SACE_3295 alpha/beta hydrolase; alpha/beta hydrolase complement(4617388..4618092) Pseudonocardia dioxanivorans CB1190 10366132 YP_004334306.1 CDS Psed_4291 NC_015312.1 4618089 4618304 R PFAM: 4-oxalocrotonate tautomerase; KEGG: rop:ROP_54160 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(4618089..4618304) Pseudonocardia dioxanivorans CB1190 10366133 YP_004334307.1 CDS Psed_4292 NC_015312.1 4618317 4619087 R KEGG: tcu:Tcur_0537 4-oxalocrotonate decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like; 4-oxalocrotonate decarboxylase complement(4618317..4619087) Pseudonocardia dioxanivorans CB1190 10366134 YP_004334308.1 CDS Psed_4293 NC_015312.1 4619084 4619893 R KEGG: amd:AMED_8623 2-keto-4-pentenoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; 2-oxopent-4-enoate hydratase complement(4619084..4619893) Pseudonocardia dioxanivorans CB1190 10366135 YP_004334309.1 CDS Psed_4294 NC_015312.1 4619969 4620502 R PFAM: Protein of unknown function DUF421; KEGG: aai:AARI_18290 hypothetical protein; hypothetical protein complement(4619969..4620502) Pseudonocardia dioxanivorans CB1190 10366136 YP_004334310.1 CDS Psed_4295 NC_015312.1 4620647 4621447 R KEGG: cai:Caci_3623 hypothetical protein; hypothetical protein complement(4620647..4621447) Pseudonocardia dioxanivorans CB1190 10366137 YP_004334311.1 CDS Psed_4296 NC_015312.1 4621619 4622221 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_1039 transcriptional regulator, TetR family; TetR family transcriptional regulator 4621619..4622221 Pseudonocardia dioxanivorans CB1190 10366138 YP_004334312.1 CDS Psed_4297 NC_015312.1 4622332 4627443 D PFAM: Hedgehog, N-terminal signaling domain; KEGG: lpa:lpa_01031 hypothetical protein; hypothetical protein 4622332..4627443 Pseudonocardia dioxanivorans CB1190 10366139 YP_004334313.1 CDS Psed_4298 NC_015312.1 4627617 4628105 D KEGG: cms:CMS_1406 phosphatase; phosphatase 4627617..4628105 Pseudonocardia dioxanivorans CB1190 10366140 YP_004334314.1 CDS Psed_4299 NC_015312.1 4628125 4629351 R KEGG: bcv:Bcav_2807 major facilitator superfamily MFS_1; manually curated; PFAM: Major facilitator superfamily MFS-1; major facilitator superfamily protein complement(4628125..4629351) Pseudonocardia dioxanivorans CB1190 10366141 YP_004334315.1 CDS Psed_4300 NC_015312.1 4629552 4633256 D SMART: Molybdopterin oxidoreductase, Fe4S4 domain; TIGRFAM: Nitrate reductase, alpha subunit; KEGG: req:REQ_04230 nitrate reductase alpha subunit NarG; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; nitrate reductase subunit alpha 4629552..4633256 Pseudonocardia dioxanivorans CB1190 10366142 YP_004334316.1 CDS Psed_4301 NC_015312.1 4633259 4635001 D KEGG: gbr:Gbro_3700 nitrate reductase subunit beta; TIGRFAM: Nitrate reductase, beta subunit; nitrate reductase subunit beta 4633259..4635001 Pseudonocardia dioxanivorans CB1190 10366143 YP_004334317.1 CDS Psed_4302 NC_015312.1 4634998 4635642 D KEGG: sro:Sros_1922 nitrate reductase delta subunit protein; TIGRFAM: Nitrate reductase chaperone, NarJ; PFAM: DMSO/Nitrate reductase chaperone; nitrate reductase molybdenum cofactor assembly chaperone 4634998..4635642 Pseudonocardia dioxanivorans CB1190 10366144 YP_004334318.1 CDS Psed_4303 NC_015312.1 4635639 4636373 D TIGRFAM: Nitrate reductase, gamma subunit; KEGG: nml:Namu_3672 respiratory nitrate reductase subunit gamma; PFAM: Nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma 4635639..4636373 Pseudonocardia dioxanivorans CB1190 10366145 YP_004334319.1 CDS Psed_4304 NC_015312.1 4636394 4637287 R PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein complement(4636394..4637287) Pseudonocardia dioxanivorans CB1190 10366146 YP_004334320.1 CDS Psed_4305 NC_015312.1 4637745 4638002 R KEGG: cai:Caci_0200 Clp domain protein; Clp domain-containing protein complement(4637745..4638002) Pseudonocardia dioxanivorans CB1190 10366147 YP_004334321.1 CDS Psed_4306 NC_015312.1 4638212 4638514 D hypothetical protein 4638212..4638514 Pseudonocardia dioxanivorans CB1190 10366148 YP_004334322.1 CDS Psed_4307 NC_015312.1 4638710 4640551 D PFAM: Phosphoesterase; KEGG: amd:AMED_7590 phospholipase C; phosphoesterase 4638710..4640551 Pseudonocardia dioxanivorans CB1190 10366149 YP_004334323.1 CDS Psed_4308 NC_015312.1 4640772 4641170 R hypothetical protein complement(4640772..4641170) Pseudonocardia dioxanivorans CB1190 10366150 YP_004334324.1 CDS Psed_4309 NC_015312.1 4641172 4642113 R KEGG: jan:Jann_2625 alpha/beta hydrolase; PFAM: Alpha/beta hydrolase fold-1; Haloalkane dehalogenase complement(4641172..4642113) Pseudonocardia dioxanivorans CB1190 10366151 YP_004334325.1 CDS Psed_4310 NC_015312.1 4642130 4643245 R PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: pol:Bpro_5180 mandelate racemase/muconate lactonizing enzyme; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; mandelate racemase complement(4642130..4643245) Pseudonocardia dioxanivorans CB1190 10366152 YP_004334326.1 CDS Psed_4311 NC_015312.1 4643242 4644174 R TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: pol:Bpro_0535 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; 2-dehydropantoate 2-reductase complement(4643242..4644174) Pseudonocardia dioxanivorans CB1190 10366153 YP_004334327.1 CDS Psed_4312 NC_015312.1 4644281 4644889 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pol:Bpro_5182 TetR family transcriptional regulator; TetR family transcriptional regulator 4644281..4644889 Pseudonocardia dioxanivorans CB1190 10366154 YP_004334328.1 CDS Psed_4314 NC_015312.1 4645517 4645972 R hypothetical protein complement(4645517..4645972) Pseudonocardia dioxanivorans CB1190 10366156 YP_004334329.1 CDS Psed_4315 NC_015312.1 4646468 4649134 D KEGG: cai:Caci_3610 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4646468..4649134 Pseudonocardia dioxanivorans CB1190 10366157 YP_004334330.1 CDS Psed_4316 NC_015312.1 4649235 4649837 D KEGG: cwo:Cwoe_3840 hypothetical protein; hypothetical protein 4649235..4649837 Pseudonocardia dioxanivorans CB1190 10366158 YP_004334331.1 CDS Psed_4317 NC_015312.1 4649834 4651288 D KEGG: nml:Namu_2946 9-cis-epoxycarotenoid dioxygenase; PFAM: Carotenoid oxygenase; 9-cis-epoxycarotenoid dioxygenase 4649834..4651288 Pseudonocardia dioxanivorans CB1190 10366159 YP_004334332.1 CDS Psed_4318 NC_015312.1 4651316 4651864 D KEGG: mpi:Mpet_0814 hypothetical protein; hypothetical protein 4651316..4651864 Pseudonocardia dioxanivorans CB1190 10366160 YP_004334333.1 CDS Psed_4319 NC_015312.1 4652051 4654867 R KEGG: sro:Sros_8709 ATPase-like protein; PFAM: Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(4652051..4654867) Pseudonocardia dioxanivorans CB1190 10366161 YP_004334334.1 CDS Psed_4320 NC_015312.1 4655004 4655759 R PFAM: Alcohol dehydrogenase, C-terminal; KEGG: rop:ROP_04760 oxidoreductase; alcohol dehydrogenase complement(4655004..4655759) Pseudonocardia dioxanivorans CB1190 10366162 YP_004334335.1 CDS Psed_4321 NC_015312.1 4655756 4656103 R hypothetical protein complement(4655756..4656103) Pseudonocardia dioxanivorans CB1190 10366163 YP_004334336.1 CDS Psed_4322 NC_015312.1 4656107 4657489 R KEGG: amd:AMED_3505 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase complement(4656107..4657489) Pseudonocardia dioxanivorans CB1190 10366164 YP_004334337.1 CDS Psed_4324 NC_015312.1 4658324 4658551 D hypothetical protein 4658324..4658551 Pseudonocardia dioxanivorans CB1190 10366166 YP_004334338.1 CDS Psed_4325 NC_015312.1 4658548 4660251 D KEGG: amd:AMED_3893 phthalate 4,5-dioxygenase; PFAM: Molybdenum cofactor sulfurase, C-terminal; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; nitric oxide dioxygenase 4658548..4660251 Pseudonocardia dioxanivorans CB1190 10366167 YP_004334339.1 CDS Psed_4326 NC_015312.1 4660431 4660703 D KEGG: req:REQ_13370 integral membrane protein; hypothetical protein 4660431..4660703 Pseudonocardia dioxanivorans CB1190 10366168 YP_004334340.1 CDS Psed_4327 NC_015312.1 4660754 4661614 R PFAM: Alpha/beta hydrolase fold-1; KEGG: efe:EFER_2276 hydrolase or acyltransferase; alpha/beta hydrolase complement(4660754..4661614) Pseudonocardia dioxanivorans CB1190 10366169 YP_004334341.1 CDS Psed_4328 NC_015312.1 4661685 4663253 R KEGG: cai:Caci_3634 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Metal-dependent phosphohydrolase, HD subdomain; SMART: Transcription regulator LuxR, C-terminal; Metal-dependent phosphohydrolase, HD domain; LuxR family transcriptional regulator complement(4661685..4663253) Pseudonocardia dioxanivorans CB1190 10366170 YP_004334342.1 CDS Psed_4329 NC_015312.1 4663880 4664884 D KEGG: fal:FRAAL1383 hypothetical protein; hypothetical protein 4663880..4664884 Pseudonocardia dioxanivorans CB1190 10366171 YP_004334343.1 CDS Psed_4330 NC_015312.1 4664881 4665771 D KEGG: fal:FRAAL1382 hypothetical protein; hypothetical protein 4664881..4665771 Pseudonocardia dioxanivorans CB1190 10366172 YP_004334344.1 CDS Psed_4331 NC_015312.1 4665825 4666817 D PFAM: Protein of unknown function DUF955; KEGG: sgr:SGR_7016t hypothetical protein; hypothetical protein 4665825..4666817 Pseudonocardia dioxanivorans CB1190 10366173 YP_004334345.1 CDS Psed_4332 NC_015312.1 4666924 4667220 D KEGG: fra:Francci3_0884 hypothetical protein; hypothetical protein 4666924..4667220 Pseudonocardia dioxanivorans CB1190 10366174 YP_004334346.1 CDS Psed_4333 NC_015312.1 4667195 4668502 D PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: rpx:Rpdx1_2116 UBA/ThiF-type NAD/FAD-binding protein; UBA/THIF-type NAD/FAD binding protein 4667195..4668502 Pseudonocardia dioxanivorans CB1190 10366175 YP_004334347.1 CDS Psed_4334 NC_015312.1 4668504 4668887 D KEGG: sjp:SJA_C1-20390 hypothetical protein; hypothetical protein 4668504..4668887 Pseudonocardia dioxanivorans CB1190 10366176 YP_004334348.1 CDS Psed_4336 NC_015312.1 4671793 4673139 D PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 4671793..4673139 Pseudonocardia dioxanivorans CB1190 10366178 YP_004334349.1 CDS Psed_4337 NC_015312.1 4673281 4674177 D PFAM: Ureohydrolase; KEGG: pdi:BDI_1757 arginase; arginase 4673281..4674177 Pseudonocardia dioxanivorans CB1190 10366179 YP_004334350.1 CDS Psed_4338 NC_015312.1 4674603 4674908 D hypothetical protein 4674603..4674908 Pseudonocardia dioxanivorans CB1190 10366180 YP_004334351.1 CDS Psed_4339 NC_015312.1 4674905 4675084 D hypothetical protein 4674905..4675084 Pseudonocardia dioxanivorans CB1190 10366181 YP_004334352.1 CDS Psed_4340 NC_015312.1 4675228 4675575 R hypothetical protein complement(4675228..4675575) Pseudonocardia dioxanivorans CB1190 10366182 YP_004334353.1 CDS Psed_4341 NC_015312.1 4675666 4676271 R hypothetical protein complement(4675666..4676271) Pseudonocardia dioxanivorans CB1190 10366183 YP_004334354.1 CDS Psed_4342 NC_015312.1 4676748 4677548 R PFAM: Protein of unknown function DUF81; KEGG: sgr:SGR_5215 hypothetical protein; hypothetical protein complement(4676748..4677548) Pseudonocardia dioxanivorans CB1190 10366184 YP_004334355.1 CDS Psed_4343 NC_015312.1 4677649 4678071 D KEGG: sen:SACE_0570 molybdate ABC molybdate transporter substrate-binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, MerR; molybdenum-pterin-binding protein 4677649..4678071 Pseudonocardia dioxanivorans CB1190 10366185 YP_004334356.1 CDS Psed_4344 NC_015312.1 4678084 4679082 R PFAM: Bile acid:sodium symporter; KEGG: rop:ROP_00110 hypothetical membrane protein; bile acid:sodium symporter complement(4678084..4679082) Pseudonocardia dioxanivorans CB1190 10366186 YP_004334357.1 CDS Psed_4345 NC_015312.1 4679468 4679830 D KEGG: nfa:nfa22980 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 4679468..4679830 Pseudonocardia dioxanivorans CB1190 10366187 YP_004334358.1 CDS Psed_4346 NC_015312.1 4679827 4680309 D PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: nfa:nfa22970 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 4679827..4680309 Pseudonocardia dioxanivorans CB1190 10366188 YP_004334359.1 CDS Psed_4347 NC_015312.1 4680306 4680932 D TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: mpa:MAP0231c hypothetical protein; hypothetical protein 4680306..4680932 Pseudonocardia dioxanivorans CB1190 10366189 YP_004334360.1 CDS Psed_4348 NC_015312.1 4681337 4681594 R manually curated; hypothetical protein complement(4681337..4681594) Pseudonocardia dioxanivorans CB1190 10366190 YP_004334361.1 CDS Psed_4350 NC_015312.1 4682384 4683430 D PFAM: Aminoglycoside phosphotransferase; KEGG: mmi:MMAR_1490 hypothetical protein; aminoglycoside phosphotransferase 4682384..4683430 Pseudonocardia dioxanivorans CB1190 10366192 YP_004334362.1 CDS Psed_4351 NC_015312.1 4683440 4684243 R PFAM: Nucleoside phosphorylase domain; KEGG: ote:Oter_4454 purine phosphorylase 1; purine or other phosphorylase 1 complement(4683440..4684243) Pseudonocardia dioxanivorans CB1190 10366193 YP_004334363.1 CDS Psed_4352 NC_015312.1 4684252 4685550 R PFAM: Major facilitator superfamily MFS-1; KEGG: art:Arth_3829 major facilitator transporter; major facilitator superfamily protein complement(4684252..4685550) Pseudonocardia dioxanivorans CB1190 10366194 YP_004334364.1 CDS Psed_4353 NC_015312.1 4685547 4686944 R KEGG: rop:ROP_pROB01-03280 hypothetical protein; PFAM: Beta-lactamase-like; Rhodanese-like; SMART: Beta-lactamase-like; Rhodanese-like; beta-lactamase domain-containing protein complement(4685547..4686944) Pseudonocardia dioxanivorans CB1190 10366195 YP_004334365.1 CDS Psed_4354 NC_015312.1 4687018 4687683 D KEGG: rha:RHA1_ro11220 ArsR family transcriptional regulator; PFAM: Rhodanese-like; HTH transcriptional regulator, ArsR; SMART: Rhodanese-like; HTH transcriptional regulator, ArsR; rhodanese-like protein 4687018..4687683 Pseudonocardia dioxanivorans CB1190 10366196 YP_004334366.1 CDS Psed_4355 NC_015312.1 4687690 4688352 R PFAM: Methyltransferase type 11; KEGG: gob:Gobs_1427 type 11 methyltransferase; type 11 methyltransferase complement(4687690..4688352) Pseudonocardia dioxanivorans CB1190 10366197 YP_004334367.1 CDS Psed_4356 NC_015312.1 4688431 4689759 R PFAM: Major facilitator superfamily MFS-1; KEGG: stp:Strop_2968 major facilitator transporter; major facilitator superfamily protein complement(4688431..4689759) Pseudonocardia dioxanivorans CB1190 10366198 YP_004334368.1 CDS Psed_4357 NC_015312.1 4690095 4690406 D KEGG: dmo:Dmoj_GI15099 GI15099 gene product from transcript GI15099-RA; hypothetical protein 4690095..4690406 Pseudonocardia dioxanivorans CB1190 10366199 YP_004334369.1 CDS Psed_4358 NC_015312.1 4690574 4690987 R hypothetical protein complement(4690574..4690987) Pseudonocardia dioxanivorans CB1190 10366200 YP_004334370.1 CDS Psed_4359 NC_015312.1 4690984 4691181 R hypothetical protein complement(4690984..4691181) Pseudonocardia dioxanivorans CB1190 10366201 YP_004334371.1 CDS Psed_4360 NC_015312.1 4691178 4693463 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tcu:Tcur_0090 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(4691178..4693463) Pseudonocardia dioxanivorans CB1190 10366202 YP_004334372.1 CDS Psed_4361 NC_015312.1 4693463 4694068 R PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: mjl:Mjls_0685 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(4693463..4694068) Pseudonocardia dioxanivorans CB1190 10366203 YP_004334373.1 CDS Psed_4362 NC_015312.1 4694077 4694700 R KEGG: rha:RHA1_ro07031 hypothetical protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; vitamin K epoxide reductase complement(4694077..4694700) Pseudonocardia dioxanivorans CB1190 10366204 YP_004334374.1 CDS Psed_4363 NC_015312.1 4694700 4695404 R PFAM: DSBA-like thioredoxin domain; KEGG: nfa:pnf1420 hypothetical protein; DSBA oxidoreductase complement(4694700..4695404) Pseudonocardia dioxanivorans CB1190 10366205 YP_004334375.1 CDS Psed_4364 NC_015312.1 4695401 4695931 R PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein complement(4695401..4695931) Pseudonocardia dioxanivorans CB1190 10366206 YP_004334376.1 CDS Psed_4365 NC_015312.1 4696079 4696516 R hypothetical protein complement(4696079..4696516) Pseudonocardia dioxanivorans CB1190 10366207 YP_004334377.1 CDS Psed_4366 NC_015312.1 4696718 4697488 D PFAM: Peptidase M23; KEGG: rop:ROP_10830 peptidase M23 family protein; peptidase M23 4696718..4697488 Pseudonocardia dioxanivorans CB1190 10366208 YP_004334378.1 CDS Psed_4367 NC_015312.1 4697573 4697932 D hypothetical protein 4697573..4697932 Pseudonocardia dioxanivorans CB1190 10366209 YP_004334379.1 CDS Psed_4368 NC_015312.1 4698068 4698289 D hypothetical protein 4698068..4698289 Pseudonocardia dioxanivorans CB1190 10366210 YP_004334380.1 CDS Psed_4369 NC_015312.1 4698286 4699260 D PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: cai:Caci_1675 hypothetical protein; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein 4698286..4699260 Pseudonocardia dioxanivorans CB1190 10366211 YP_004334381.1 CDS Psed_4370 NC_015312.1 4699257 4699823 D PFAM: Copper resistance protein CopC, core; KEGG: sro:Sros_6847 conserved hypothetical protein of Cu resistance protein CopC-like protein; copper resistance protein CopC 4699257..4699823 Pseudonocardia dioxanivorans CB1190 10366212 YP_004334382.1 CDS Psed_4371 NC_015312.1 4699801 4700184 R KEGG: amd:AMED_3101 lysyl tRNA synthetase-like protein; lysyl tRNA synthetase-like protein complement(4699801..4700184) Pseudonocardia dioxanivorans CB1190 10366213 YP_004334383.1 CDS Psed_4372 NC_015312.1 4700184 4701338 R PFAM: Methyltransferase type 11; KEGG: rxy:Rxyl_3149 glycosyl transferase protein; type 11 methyltransferase complement(4700184..4701338) Pseudonocardia dioxanivorans CB1190 10366214 YP_004334384.1 CDS Psed_4373 NC_015312.1 4701391 4701984 R hypothetical protein complement(4701391..4701984) Pseudonocardia dioxanivorans CB1190 10366215 YP_004334385.1 CDS Psed_4374 NC_015312.1 4702217 4702522 D KEGG: dmo:Dmoj_GI15099 GI15099 gene product from transcript GI15099-RA; hypothetical protein 4702217..4702522 Pseudonocardia dioxanivorans CB1190 10366216 YP_004334386.1 CDS Psed_4375 NC_015312.1 4702690 4703979 R TIGRFAM: Natural resistance-associated macrophage protein; HAMAP: Manganese transport protein MntH; KEGG: mil:ML5_2269 mn2+/fe2+ transporter, nramp family; PFAM: Natural resistance-associated macrophage protein; manganese transport protein mntH complement(4702690..4703979) Pseudonocardia dioxanivorans CB1190 10366217 YP_004334387.1 CDS Psed_4376 NC_015312.1 4703972 4706182 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: rop:ROP_pROB01-02560 cadmium-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(4703972..4706182) Pseudonocardia dioxanivorans CB1190 10366218 YP_004334388.1 CDS Psed_4377 NC_015312.1 4706175 4706555 R KEGG: nda:Ndas_1791 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(4706175..4706555) Pseudonocardia dioxanivorans CB1190 10366219 YP_004334389.1 CDS Psed_4378 NC_015312.1 4706677 4707612 D KEGG: mmi:MMAR_2144 hypothetical protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 4706677..4707612 Pseudonocardia dioxanivorans CB1190 10366220 YP_004334390.1 CDS Psed_4379 NC_015312.1 4707679 4708200 D hypothetical protein 4707679..4708200 Pseudonocardia dioxanivorans CB1190 10366221 YP_004334391.1 CDS Psed_4380 NC_015312.1 4708212 4712585 R PFAM: TrwC relaxase; KEGG: kfl:Kfla_2190 TrwC relaxase; TrwC relaxase complement(4708212..4712585) Pseudonocardia dioxanivorans CB1190 10366222 YP_004334392.1 CDS Psed_4381 NC_015312.1 4712827 4713747 R KEGG: scb:SCAB_46911 mobile element transfer protein; hypothetical protein complement(4712827..4713747) Pseudonocardia dioxanivorans CB1190 10366223 YP_004334393.1 CDS Psed_4382 NC_015312.1 4713744 4714142 R hypothetical protein complement(4713744..4714142) Pseudonocardia dioxanivorans CB1190 10366224 YP_004334394.1 CDS Psed_4383 NC_015312.1 4714139 4714807 R KEGG: kfl:Kfla_2188 hypothetical protein; hypothetical protein complement(4714139..4714807) Pseudonocardia dioxanivorans CB1190 10366225 YP_004334395.1 CDS Psed_4384 NC_015312.1 4714913 4716787 R KEGG: kfl:Kfla_2184 type IV secretory pathway VirD4 protein-like protein; type IV secretory pathway VirD4 protein-like protein complement(4714913..4716787) Pseudonocardia dioxanivorans CB1190 10366226 YP_004334396.1 CDS Psed_4385 NC_015312.1 4716784 4717146 R hypothetical protein complement(4716784..4717146) Pseudonocardia dioxanivorans CB1190 10366227 YP_004334397.1 CDS Psed_4386 NC_015312.1 4717143 4717571 R hypothetical protein complement(4717143..4717571) Pseudonocardia dioxanivorans CB1190 10366228 YP_004334398.1 CDS Psed_4388 NC_015312.1 4718111 4718347 R hypothetical protein complement(4718111..4718347) Pseudonocardia dioxanivorans CB1190 10366230 YP_004334399.1 CDS Psed_4389 NC_015312.1 4718344 4718607 R TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: kfl:Kfla_2180 DNA binding domain protein, excisionase; excisionase complement(4718344..4718607) Pseudonocardia dioxanivorans CB1190 10366231 YP_004334400.1 CDS Psed_4390 NC_015312.1 4718829 4719944 D KEGG: sen:SACE_0474 hypothetical protein; hypothetical protein 4718829..4719944 Pseudonocardia dioxanivorans CB1190 10366232 YP_004334401.1 CDS Psed_4391 NC_015312.1 4719930 4720505 R PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_1278 NUDIX hydrolase; NUDIX hydrolase complement(4719930..4720505) Pseudonocardia dioxanivorans CB1190 10366233 YP_004334402.1 CDS Psed_4392 NC_015312.1 4720543 4720986 R KEGG: sro:Sros_8675 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4720543..4720986) Pseudonocardia dioxanivorans CB1190 10366234 YP_004334403.1 CDS Psed_4393 NC_015312.1 4721098 4722873 R KEGG: sna:Snas_6234 regulatory protein GntR HTH; PFAM: Integrase, catalytic core, phage; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; integrase protein complement(4721098..4722873) Pseudonocardia dioxanivorans CB1190 10366235 YP_004334404.1 CDS Psed_4394 NC_015312.1 4723053 4723757 R KEGG: rha:RHA1_ro07102 hypothetical protein; hypothetical protein complement(4723053..4723757) Pseudonocardia dioxanivorans CB1190 10366237 YP_004334405.1 CDS Psed_4395 NC_015312.1 4723754 4724140 R KEGG: mil:ML5_4917 hypothetical protein; hypothetical protein complement(4723754..4724140) Pseudonocardia dioxanivorans CB1190 10366238 YP_004334406.1 CDS Psed_4396 NC_015312.1 4724140 4724580 R KEGG: amd:AMED_7516 hypothetical protein; hypothetical protein complement(4724140..4724580) Pseudonocardia dioxanivorans CB1190 10366239 YP_004334407.1 CDS Psed_4397 NC_015312.1 4724601 4725041 R PFAM: Polyketide cyclase/dehydrase; KEGG: sen:SACE_5694 hypothetical protein; polyketide cyclase/dehydrase complement(4724601..4725041) Pseudonocardia dioxanivorans CB1190 10366240 YP_004334408.1 CDS Psed_4398 NC_015312.1 4725042 4725914 R PFAM: TIM-barrel signal transduction protein, predicted; KEGG: sen:SACE_5695 hypothetical protein; TIM-barrel signal transduction protein complement(4725042..4725914) Pseudonocardia dioxanivorans CB1190 10366241 YP_004334409.1 CDS Psed_4399 NC_015312.1 4725911 4727098 R PFAM: Uncharacterised protein family UPF0261; KEGG: sen:SACE_5696 hypothetical protein; hypothetical protein complement(4725911..4727098) Pseudonocardia dioxanivorans CB1190 10366242 YP_004334410.1 CDS Psed_4400 NC_015312.1 4727138 4727512 R hypothetical protein complement(4727138..4727512) Pseudonocardia dioxanivorans CB1190 10366243 YP_004334411.1 CDS Psed_4401 NC_015312.1 4727621 4728979 R KEGG: rha:RHA1_ro00971 hypothetical protein; manually curated; PFAM: Uncharacterised protein family YphA; DoxX family protein complement(4727621..4728979) Pseudonocardia dioxanivorans CB1190 10366244 YP_004334412.1 CDS Psed_4402 NC_015312.1 4729033 4730061 D KEGG: mil:ML5_3758 glucokinase, rok family; PFAM: ROK; glucokinase 4729033..4730061 Pseudonocardia dioxanivorans CB1190 10366245 YP_004334413.1 CDS Psed_4403 NC_015312.1 4730071 4731849 D KEGG: gbr:Gbro_2527 hypothetical protein; hypothetical protein 4730071..4731849 Pseudonocardia dioxanivorans CB1190 10366246 YP_004334414.1 CDS Psed_4404 NC_015312.1 4731846 4732418 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_5232 aminoglycoside 6'-N-acetyltransferase; GCN5-like N-acetyltransferase 4731846..4732418 Pseudonocardia dioxanivorans CB1190 10366247 YP_004334415.1 CDS Psed_4405 NC_015312.1 4732468 4733181 R PFAM: Tetracycline transcriptional regulator, TetR, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_6464 transcriptional regulator, TetR family; tetracycline repressor complement(4732468..4733181) Pseudonocardia dioxanivorans CB1190 10366248 YP_004334416.1 CDS Psed_4406 NC_015312.1 4733292 4734728 D PFAM: Major facilitator superfamily MFS-1; KEGG: sro:Sros_6465 transporter; major facilitator superfamily protein 4733292..4734728 Pseudonocardia dioxanivorans CB1190 10366249 YP_004334417.1 CDS Psed_4407 NC_015312.1 4734750 4735535 R KEGG: fre:Franean1_5043 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Domain of unknown function DUF1503; hypothetical protein complement(4734750..4735535) Pseudonocardia dioxanivorans CB1190 10366250 YP_004334418.1 CDS Psed_4408 NC_015312.1 4735682 4735960 D hypothetical protein 4735682..4735960 Pseudonocardia dioxanivorans CB1190 10366251 YP_004334419.1 CDS Psed_4409 NC_015312.1 4736072 4739317 D TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; KEGG: amd:AMED_2498 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; ArgK protein; methylmalonyl-CoA mutase large subunit 4736072..4739317 Pseudonocardia dioxanivorans CB1190 10366252 YP_004334420.1 CDS Psed_4410 NC_015312.1 4739466 4739957 R KEGG: gob:Gobs_1789 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(4739466..4739957) Pseudonocardia dioxanivorans CB1190 10366253 YP_004334421.1 CDS Psed_4411 NC_015312.1 4740021 4740647 D KEGG: nml:Namu_1846 NAD(P)H dehydrogenase (quinone); HAMAP: NADH-azoreductase, FMN-dependent; PFAM: Flavodoxin-like fold; FMN-dependent NADH-azoreductase 4740021..4740647 Pseudonocardia dioxanivorans CB1190 10366254 YP_004334422.1 CDS Psed_4412 NC_015312.1 4740577 4741770 R PFAM: Major facilitator superfamily MFS-1; KEGG: srt:Srot_0667 major facilitator superfamily protein; major facilitator superfamily protein complement(4740577..4741770) Pseudonocardia dioxanivorans CB1190 10366255 YP_004334423.1 CDS Psed_4413 NC_015312.1 4741956 4742714 D PFAM: Periplasmic binding protein; KEGG: fra:Francci3_3150 hypothetical protein; ABC transporter substrate-binding protein 4741956..4742714 Pseudonocardia dioxanivorans CB1190 10366256 YP_004334424.1 CDS Psed_4414 NC_015312.1 4742761 4743801 D KEGG: fri:FraEuI1c_3494 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; 3-hydroxyisobutyryl-CoA hydrolase 4742761..4743801 Pseudonocardia dioxanivorans CB1190 10366257 YP_004334425.1 CDS Psed_4415 NC_015312.1 4743931 4744815 D KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 4743931..4744815 Pseudonocardia dioxanivorans CB1190 10366258 YP_004334426.1 CDS Psed_4416 NC_015312.1 4744840 4746033 R PFAM: Alanine racemase, N-terminal; KEGG: req:REQ_14970 hypothetical protein; alanine racemase complement(4744840..4746033) Pseudonocardia dioxanivorans CB1190 10366259 YP_004334427.1 CDS Psed_4417 NC_015312.1 4746030 4747214 R PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro06868 major facilitator transporter; major facilitator superfamily protein complement(4746030..4747214) Pseudonocardia dioxanivorans CB1190 10366260 YP_004334428.1 CDS Psed_4418 NC_015312.1 4747214 4747861 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: req:REQ_14960 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4747214..4747861) Pseudonocardia dioxanivorans CB1190 10366261 YP_004334429.1 CDS Psed_4419 NC_015312.1 4747927 4749246 D TIGRFAM: FAD-linked oxidoreductase; KEGG: rha:RHA1_ro06029 L-gulonolactone oxidase; PFAM: D-arabinono-1,4-lactone oxidase; FAD linked oxidase, N-terminal; FAD-linked oxidoreductase 4747927..4749246 Pseudonocardia dioxanivorans CB1190 10366262 YP_004334430.1 CDS Psed_4420 NC_015312.1 4749266 4749724 D PFAM: NUDIX hydrolase domain; KEGG: gob:Gobs_3663 NUDIX hydrolase; NUDIX hydrolase 4749266..4749724 Pseudonocardia dioxanivorans CB1190 10366263 YP_004334431.1 CDS Psed_4421 NC_015312.1 4749762 4750622 D PFAM: Alpha/beta hydrolase fold-1; KEGG: rer:RER_53490 lipase; alpha/beta hydrolase 4749762..4750622 Pseudonocardia dioxanivorans CB1190 10366264 YP_004334432.1 CDS Psed_4422 NC_015312.1 4750676 4751272 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL4881 transcriptional regulator; TetR family transcriptional regulator complement(4750676..4751272) Pseudonocardia dioxanivorans CB1190 10366265 YP_004334433.1 CDS Psed_4423 NC_015312.1 4751269 4752435 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pla:Plav_1773 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(4751269..4752435) Pseudonocardia dioxanivorans CB1190 10366266 YP_004334434.1 CDS Psed_4424 NC_015312.1 4752687 4753469 D KEGG: ami:Amir_6644 hypothetical protein; hypothetical protein 4752687..4753469 Pseudonocardia dioxanivorans CB1190 10366267 YP_004334435.1 CDS Psed_4425 NC_015312.1 4753611 4754315 R PFAM: Methyltransferase type 11; KEGG: stp:Strop_0183 methyltransferase type 11; type 11 methyltransferase complement(4753611..4754315) Pseudonocardia dioxanivorans CB1190 10366268 YP_004334436.1 CDS Psed_4426 NC_015312.1 4754398 4755327 D KEGG: stp:Strop_0182 helix-turn-helix domain-containing protein; PFAM: Cupin 2, conserved barrel; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 4754398..4755327 Pseudonocardia dioxanivorans CB1190 10366269 YP_004334437.1 CDS Psed_4427 NC_015312.1 4755430 4756113 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sna:Snas_2833 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4755430..4756113) Pseudonocardia dioxanivorans CB1190 10366270 YP_004334438.1 CDS Psed_4428 NC_015312.1 4756223 4757437 D PFAM: Cytochrome P450; KEGG: sna:Snas_2832 cytochrome P450; cytochrome P450 4756223..4757437 Pseudonocardia dioxanivorans CB1190 10366271 YP_004334439.1 CDS Psed_4429 NC_015312.1 4757705 4758934 D PFAM: Major facilitator superfamily MFS-1; KEGG: scb:SCAB_2561 hypothetical protein; major facilitator superfamily protein 4757705..4758934 Pseudonocardia dioxanivorans CB1190 10366272 YP_004334440.1 CDS Psed_4430 NC_015312.1 4759017 4759976 D KEGG: rha:RHA1_ro03286 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 4759017..4759976 Pseudonocardia dioxanivorans CB1190 10366273 YP_004334441.1 CDS Psed_4431 NC_015312.1 4760088 4761329 D KEGG: kfl:Kfla_1943 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 4760088..4761329 Pseudonocardia dioxanivorans CB1190 10366274 YP_004334442.1 CDS Psed_4432 NC_015312.1 4761404 4762447 D KEGG: ace:Acel_0148 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 4761404..4762447 Pseudonocardia dioxanivorans CB1190 10366275 YP_004334443.1 CDS Psed_4433 NC_015312.1 4762512 4763423 D PFAM: Luciferase-like, subgroup; KEGG: sgr:SGR_1577 monooxygenase; luciferase-like protein 4762512..4763423 Pseudonocardia dioxanivorans CB1190 10366276 YP_004334444.1 CDS Psed_4434 NC_015312.1 4763492 4764415 D KEGG: tcu:Tcur_2334 luciferase-like monooxygenase; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 4763492..4764415 Pseudonocardia dioxanivorans CB1190 10366277 YP_004334445.1 CDS Psed_4435 NC_015312.1 4764534 4765019 D KEGG: rha:RHA1_ro07107 hypothetical protein; hypothetical protein 4764534..4765019 Pseudonocardia dioxanivorans CB1190 10366278 YP_004334446.1 CDS Psed_4436 NC_015312.1 4765205 4766827 R KEGG: cyj:Cyan7822_2221 monooxygenase FAD-binding protein; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase complement(4765205..4766827) Pseudonocardia dioxanivorans CB1190 10366279 YP_004334447.1 CDS Psed_4437 NC_015312.1 4766865 4767998 R KEGG: reu:Reut_B3601 salicylate 1-monooxygenase; PFAM: Monooxygenase, FAD-binding; Salicylate 1-monooxygenase complement(4766865..4767998) Pseudonocardia dioxanivorans CB1190 10366280 YP_004334448.1 CDS Psed_4438 NC_015312.1 4767995 4768831 R PFAM: Patatin/Phospholipase A2-related; KEGG: tbi:Tbis_1218 patatin; patatin complement(4767995..4768831) Pseudonocardia dioxanivorans CB1190 10366281 YP_004334449.1 CDS Psed_4439 NC_015312.1 4768828 4769979 R KEGG: pap:PSPA7_3908 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase complement(4768828..4769979) Pseudonocardia dioxanivorans CB1190 10366282 YP_004334450.1 CDS Psed_4440 NC_015312.1 4769976 4770971 R KEGG: rha:RHA1_ro02996 maleylacetate reductase; PFAM: Alcohol dehydrogenase, iron-type; maleylacetate reductase complement(4769976..4770971) Pseudonocardia dioxanivorans CB1190 10366283 YP_004334451.1 CDS Psed_4441 NC_015312.1 4771052 4771630 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dvl:Dvul_0299 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(4771052..4771630) Pseudonocardia dioxanivorans CB1190 10366284 YP_004334452.1 CDS Psed_4442 NC_015312.1 4771854 4772534 D KEGG: cwo:Cwoe_4525 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4771854..4772534 Pseudonocardia dioxanivorans CB1190 10366285 YP_004334453.1 CDS Psed_4443 NC_015312.1 4773151 4774197 D KEGG: kfl:Kfla_4001 hypothetical protein; hypothetical protein 4773151..4774197 Pseudonocardia dioxanivorans CB1190 10366286 YP_004334454.1 CDS Psed_4444 NC_015312.1 4774294 4775085 R KEGG: amd:AMED_7632 alpha/beta hydrolase; alpha/beta hydrolase complement(4774294..4775085) Pseudonocardia dioxanivorans CB1190 10366287 YP_004334455.1 CDS Psed_4445 NC_015312.1 4775159 4775767 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_7633 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4775159..4775767) Pseudonocardia dioxanivorans CB1190 10366288 YP_004334456.1 CDS Psed_4446 NC_015312.1 4776153 4776362 D KEGG: svi:Svir_13830 hypothetical protein; hypothetical protein 4776153..4776362 Pseudonocardia dioxanivorans CB1190 10366290 YP_004334457.1 CDS Psed_4447 NC_015312.1 4776423 4777181 R KEGG: svi:Svir_13820 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 12; trans-aconitate 2-methyltransferase complement(4776423..4777181) Pseudonocardia dioxanivorans CB1190 10366291 YP_004334458.1 CDS Psed_4448 NC_015312.1 4777178 4777702 R KEGG: amd:AMED_6586 hypothetical protein; hypothetical protein complement(4777178..4777702) Pseudonocardia dioxanivorans CB1190 10366292 YP_004334459.1 CDS Psed_4449 NC_015312.1 4777702 4779606 R KEGG: svi:Svir_13800 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase complement(4777702..4779606) Pseudonocardia dioxanivorans CB1190 10366293 YP_004334460.1 CDS Psed_4450 NC_015312.1 4779644 4780024 R KEGG: art:Arth_0254 hypothetical protein; hypothetical protein complement(4779644..4780024) Pseudonocardia dioxanivorans CB1190 10366294 YP_004334461.1 CDS Psed_4451 NC_015312.1 4780021 4780149 R hypothetical protein complement(4780021..4780149) Pseudonocardia dioxanivorans CB1190 10366295 YP_004334462.1 CDS Psed_4452 NC_015312.1 4780239 4780454 R hypothetical protein complement(4780239..4780454) Pseudonocardia dioxanivorans CB1190 10366296 YP_004334463.1 CDS Psed_4453 NC_015312.1 4780525 4781283 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_1769 hypothetical protein; NAD-dependent epimerase/dehydratase complement(4780525..4781283) Pseudonocardia dioxanivorans CB1190 10366297 YP_004334464.1 CDS Psed_4454 NC_015312.1 4781386 4782249 D KEGG: ami:Amir_1274 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4781386..4782249 Pseudonocardia dioxanivorans CB1190 10366298 YP_004334465.1 CDS Psed_4456 NC_015312.1 4783217 4783780 R KEGG: rop:ROP_50070 hypothetical protein; hypothetical protein complement(4783217..4783780) Pseudonocardia dioxanivorans CB1190 10366300 YP_004334466.1 CDS Psed_4457 NC_015312.1 4783857 4785155 R SMART: Metal-dependent phosphohydrolase, HD domain; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; Uncharacterised protein family HDIG; KEGG: ami:Amir_1271 deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase, type 2; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(4783857..4785155) Pseudonocardia dioxanivorans CB1190 10366301 YP_004334467.1 CDS Psed_4458 NC_015312.1 4785152 4785769 R PFAM: Domain of unknown function DUF218; KEGG: amd:AMED_6599 hypothetical protein; hypothetical protein complement(4785152..4785769) Pseudonocardia dioxanivorans CB1190 10366302 YP_004334468.1 CDS Psed_4459 NC_015312.1 4785991 4786947 R KEGG: cwo:Cwoe_4124 protein of unknown function DUF182; hypothetical protein complement(4785991..4786947) Pseudonocardia dioxanivorans CB1190 10366303 YP_004334469.1 CDS Psed_4460 NC_015312.1 4787105 4787497 R hypothetical protein complement(4787105..4787497) Pseudonocardia dioxanivorans CB1190 10366304 YP_004334470.1 CDS Psed_4461 NC_015312.1 4787590 4787940 D KEGG: scb:SCAB_11071 hypothetical protein; hypothetical protein 4787590..4787940 Pseudonocardia dioxanivorans CB1190 10366305 YP_004334471.1 CDS Psed_4462 NC_015312.1 4787967 4788581 R KEGG: ami:Amir_1937 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(4787967..4788581) Pseudonocardia dioxanivorans CB1190 10366306 YP_004334472.1 CDS Psed_4463 NC_015312.1 4788578 4789840 R PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: amd:AMED_6601 two-component system histidine kinase; histidine kinase complement(4788578..4789840) Pseudonocardia dioxanivorans CB1190 10366307 YP_004334473.1 CDS Psed_4464 NC_015312.1 4789851 4790576 R PFAM: ABC-2 type transporter; KEGG: nml:Namu_3004 ABC-2 type transporter; ABC transporter complement(4789851..4790576) Pseudonocardia dioxanivorans CB1190 10366308 YP_004334474.1 CDS Psed_4465 NC_015312.1 4790580 4791500 R PFAM: ABC transporter-like; KEGG: amd:AMED_6603 ABC transport system ATP-binding protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase complement(4790580..4791500) Pseudonocardia dioxanivorans CB1190 10366309 YP_004334475.1 CDS Psed_4466 NC_015312.1 4791736 4793118 D KEGG: nda:Ndas_1941 protein of unknown function DUF21; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; hypothetical protein 4791736..4793118 Pseudonocardia dioxanivorans CB1190 10366310 YP_004334476.1 CDS Psed_4467 NC_015312.1 4793115 4794113 D PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; KEGG: nda:Ndas_1940 protein of unknown function DUF21; hypothetical protein 4793115..4794113 Pseudonocardia dioxanivorans CB1190 10366311 YP_004334477.1 CDS Psed_4468 NC_015312.1 4794150 4795547 R KEGG: ami:Amir_1266 glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; glycyl-tRNA synthetase complement(4794150..4795547) Pseudonocardia dioxanivorans CB1190 10366312 YP_004334478.1 CDS Psed_4470 NC_015312.1 4796896 4797228 D KEGG: sro:Sros_7536 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 4796896..4797228 Pseudonocardia dioxanivorans CB1190 10366314 YP_004334479.1 CDS Psed_4471 NC_015312.1 4797225 4797881 D PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: cwo:Cwoe_1479 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 4797225..4797881 Pseudonocardia dioxanivorans CB1190 10366315 YP_004334480.1 CDS Psed_4472 NC_015312.1 4797901 4798263 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ami:Amir_1263 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(4797901..4798263) Pseudonocardia dioxanivorans CB1190 10366316 YP_004334481.1 CDS Psed_4473 NC_015312.1 4798297 4798668 D KEGG: rer:RER_37090 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 4798297..4798668 Pseudonocardia dioxanivorans CB1190 10366317 YP_004334482.1 CDS Psed_4474 NC_015312.1 4798665 4799087 D PFAM: Ferric-uptake regulator; KEGG: scb:SCAB_61951 metal uptake regulator; Fur family ferric uptake regulator 4798665..4799087 Pseudonocardia dioxanivorans CB1190 10366318 YP_004334483.1 CDS Psed_4475 NC_015312.1 4799122 4799907 D PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: nfa:nfa14530 undecaprenyl pyrophosphate synthetase; UDP pyrophosphate synthase 4799122..4799907 Pseudonocardia dioxanivorans CB1190 10366319 YP_004334484.1 CDS Psed_4476 NC_015312.1 4799904 4800299 D KEGG: ami:Amir_1257 hypothetical protein; hypothetical protein 4799904..4800299 Pseudonocardia dioxanivorans CB1190 10366320 YP_004334485.1 CDS Psed_4477 NC_015312.1 4800381 4800833 R KEGG: fri:FraEuI1c_3510 transcription activator effector binding protein; transcription activator effector binding protein complement(4800381..4800833) Pseudonocardia dioxanivorans CB1190 10366321 YP_004334486.1 CDS Psed_4478 NC_015312.1 4800942 4801550 R hypothetical protein complement(4800942..4801550) Pseudonocardia dioxanivorans CB1190 10366322 YP_004334487.1 CDS Psed_4479 NC_015312.1 4801668 4802408 R TIGRFAM: Recombination protein O, RecO; HAMAP: Recombination protein O, RecO; KEGG: ami:Amir_1255 DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA repair protein recO complement(4801668..4802408) Pseudonocardia dioxanivorans CB1190 10366323 YP_004334488.1 CDS Psed_4480 NC_015312.1 4802478 4803242 D PFAM: Protein of unknown function DUF2470; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: scl:sce4194 hypothetical protein; hypothetical protein 4802478..4803242 Pseudonocardia dioxanivorans CB1190 10366324 YP_004334489.1 CDS Psed_4481 NC_015312.1 4803274 4803927 D KEGG: gob:Gobs_1138 hypothetical protein; hypothetical protein 4803274..4803927 Pseudonocardia dioxanivorans CB1190 10366325 YP_004334490.1 CDS Psed_4482 NC_015312.1 4803968 4804897 R TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: sen:SACE_1487 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era complement(4803968..4804897) Pseudonocardia dioxanivorans CB1190 10366326 YP_004334491.1 CDS Psed_4483 NC_015312.1 4804894 4806153 R PFAM: FAD dependent oxidoreductase; KEGG: sgr:SGR_3901 hydroxyglutarate oxidase; FAD dependent oxidoreductase complement(4804894..4806153) Pseudonocardia dioxanivorans CB1190 10366327 YP_004334492.1 CDS Psed_4484 NC_015312.1 4806150 4806518 R KEGG: ami:Amir_1252 cytidine deaminase; cytidine deaminase complement(4806150..4806518) Pseudonocardia dioxanivorans CB1190 10366328 YP_004334493.1 CDS Psed_4485 NC_015312.1 4806499 4808046 R KEGG: sen:SACE_1485 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Domain of unknown function DUF21; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein complement(4806499..4808046) Pseudonocardia dioxanivorans CB1190 10366329 YP_004334494.1 CDS Psed_4486 NC_015312.1 4808051 4808587 R TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; KEGG: amd:AMED_6624 metalloprotease; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; metalloprotease ybeY complement(4808051..4808587) Pseudonocardia dioxanivorans CB1190 10366330 YP_004334495.1 CDS Psed_4487 NC_015312.1 4808701 4809810 R KEGG: amd:AMED_6625 phosphate starvation-inducible protein PhoH; manually curated; PFAM: PhoH-like protein; PhoH family protein complement(4808701..4809810) Pseudonocardia dioxanivorans CB1190 10366331 YP_004334496.1 CDS Psed_4488 NC_015312.1 4809938 4810471 R PFAM: Isochorismatase-like; KEGG: bav:BAV2792 isochorismatase hydrolase; isochorismatase hydrolase complement(4809938..4810471) Pseudonocardia dioxanivorans CB1190 10366332 YP_004334497.1 CDS Psed_4489 NC_015312.1 4810585 4812249 R KEGG: req:REQ_09650 thiamine pyrophosphate req_0uiring enzyme; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; acetolactate synthase complement(4810585..4812249) Pseudonocardia dioxanivorans CB1190 10366333 YP_004334498.1 CDS Psed_4490 NC_015312.1 4812246 4813019 R PFAM: cyclase; KEGG: sro:Sros_3051 hypothetical protein; cyclase complement(4812246..4813019) Pseudonocardia dioxanivorans CB1190 10366334 YP_004334499.1 CDS Psed_4491 NC_015312.1 4813148 4813942 R KEGG: fri:FraEuI1c_1236 hypothetical protein; hypothetical protein complement(4813148..4813942) Pseudonocardia dioxanivorans CB1190 10366335 YP_004334500.1 CDS Psed_4492 NC_015312.1 4814185 4814931 R KEGG: ami:Amir_1243 protein of unknown function DUF558; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; ribosomal RNA small subunit methyltransferase E complement(4814185..4814931) Pseudonocardia dioxanivorans CB1190 10366336 YP_004334501.1 CDS Psed_4493 NC_015312.1 4814954 4816120 R HAMAP: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich domain; KEGG: ami:Amir_1242 chaperone DnaJ domain protein; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ complement(4814954..4816120) Pseudonocardia dioxanivorans CB1190 10366337 YP_004334502.1 CDS Psed_4494 NC_015312.1 4816208 4817251 R TIGRFAM: Winged helix-turn-helix transcription repressor, HrcA; HAMAP: Winged helix-turn-helix transcription repressor, HrcA; KEGG: amd:AMED_6629 heat-inducible transcriptional repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA, C-terminal; heat-inducible transcription repressor HrcA complement(4816208..4817251) Pseudonocardia dioxanivorans CB1190 10366338 YP_004334503.1 CDS Psed_4495 NC_015312.1 4817361 4817786 D KEGG: sen:SACE_3690 hypothetical protein; hypothetical protein 4817361..4817786 Pseudonocardia dioxanivorans CB1190 10366339 YP_004334504.1 CDS Psed_4496 NC_015312.1 4817857 4818984 D KEGG: amd:AMED_1355 hypothetical protein; hypothetical protein 4817857..4818984 Pseudonocardia dioxanivorans CB1190 10366340 YP_004334505.1 CDS Psed_4497 NC_015312.1 4818981 4819928 D KEGG: amd:AMED_1356 ATPase component of ABC-type multidrug transport system; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 4818981..4819928 Pseudonocardia dioxanivorans CB1190 10366341 YP_004334506.1 CDS Psed_4498 NC_015312.1 4819925 4820755 D KEGG: amd:AMED_1357 hypothetical protein; hypothetical protein 4819925..4820755 Pseudonocardia dioxanivorans CB1190 10366342 YP_004334507.1 CDS Psed_4499 NC_015312.1 4820773 4821570 R KEGG: amd:AMED_1358 lipase class 2; lipase class 2 complement(4820773..4821570) Pseudonocardia dioxanivorans CB1190 10366343 YP_004334508.1 CDS Psed_4500 NC_015312.1 4821599 4822819 R TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: amd:AMED_6654 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(4821599..4822819) Pseudonocardia dioxanivorans CB1190 10366344 YP_004334509.1 CDS Psed_4501 NC_015312.1 4822779 4825142 R PFAM: Secretion protein HlyD; KEGG: fal:FRAAL6470 hypothetical protein; secretion protein HlyD family protein complement(4822779..4825142) Pseudonocardia dioxanivorans CB1190 10366345 YP_004334510.1 CDS Psed_4502 NC_015312.1 4825142 4826374 R PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: fal:FRAAL6467 ABC transporter permease; hypothetical protein complement(4825142..4826374) Pseudonocardia dioxanivorans CB1190 10366346 YP_004334511.1 CDS Psed_4503 NC_015312.1 4826371 4827099 R PFAM: ABC transporter-like; KEGG: fal:FRAAL6466 ABC-type transport systems, involved in lipoprotein release, ATPase components; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(4826371..4827099) Pseudonocardia dioxanivorans CB1190 10366347 YP_004334512.1 CDS Psed_4504 NC_015312.1 4827096 4828550 R TIGRFAM: Secretion protein HlyD; KEGG: fal:FRAAL6465 hypothetical protein; RND family efflux transporter MFP subunit complement(4827096..4828550) Pseudonocardia dioxanivorans CB1190 10366348 YP_004334513.1 CDS Psed_4505 NC_015312.1 4829095 4830774 D KEGG: amd:AMED_6656 ferredoxin-nitrite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; sulfite reductase (ferredoxin) 4829095..4830774 Pseudonocardia dioxanivorans CB1190 10366349 YP_004334514.1 CDS Psed_4506 NC_015312.1 4830839 4831015 D KEGG: amd:AMED_6657 hypothetical protein; hypothetical protein 4830839..4831015 Pseudonocardia dioxanivorans CB1190 10366350 YP_004334515.1 CDS Psed_4507 NC_015312.1 4831012 4831716 D TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; KEGG: sen:SACE_1475 phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulphate reductase; adenylylsulfate reductase 4831012..4831716 Pseudonocardia dioxanivorans CB1190 10366351 YP_004334516.1 CDS Psed_4508 NC_015312.1 4831725 4832627 D TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: sen:SACE_1474 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; sulfate adenylyltransferase small subunit 4831725..4832627 Pseudonocardia dioxanivorans CB1190 10366352 YP_004334517.1 CDS Psed_4509 NC_015312.1 4832627 4833976 D TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: ami:Amir_1235 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; sulfate adenylyltransferase large subunit 4832627..4833976 Pseudonocardia dioxanivorans CB1190 10366353 YP_004334518.1 CDS Psed_4510 NC_015312.1 4834016 4835113 D TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; KEGG: ami:Amir_1234 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; aliphatic sulfonate ABC transporter substrate-binding protein 4834016..4835113 Pseudonocardia dioxanivorans CB1190 10366354 YP_004334519.1 CDS Psed_4511 NC_015312.1 4835176 4835976 D PFAM: ABC transporter-like; KEGG: ami:Amir_1233 ABC transporter related; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 4835176..4835976 Pseudonocardia dioxanivorans CB1190 10366355 YP_004334520.1 CDS Psed_4512 NC_015312.1 4835966 4836868 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_1543 permease component of ABC-type sulfonate/nitrate/taurine transport system; ABC transporter permease 4835966..4836868 Pseudonocardia dioxanivorans CB1190 10366356 YP_004334521.1 CDS Psed_4513 NC_015312.1 4836861 4837613 D KEGG: sen:SACE_1472 cobalamin (vitamin B12) biosynthesis CbiX protein; manually curated; PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; cobalamin (vitamin B12) biosynthesis CbiX protein 4836861..4837613 Pseudonocardia dioxanivorans CB1190 10366357 YP_004334522.1 CDS Psed_4514 NC_015312.1 4838124 4838309 D hypothetical protein 4838124..4838309 Pseudonocardia dioxanivorans CB1190 10366358 YP_004334523.1 CDS Psed_4515 NC_015312.1 4838425 4843215 D PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: sen:SACE_0056 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4838425..4843215 Pseudonocardia dioxanivorans CB1190 10366359 YP_004334524.1 CDS Psed_4516 NC_015312.1 4843292 4845244 R KEGG: ami:Amir_6222 hypothetical protein; hypothetical protein complement(4843292..4845244) Pseudonocardia dioxanivorans CB1190 10366360 YP_004334525.1 CDS Psed_4517 NC_015312.1 4845637 4846734 D KEGG: sma:SAV_6696 monooxygenase; PFAM: Luciferase-like, subgroup; alkanesulfonate monooxygenase 4845637..4846734 Pseudonocardia dioxanivorans CB1190 10366361 YP_004334526.1 CDS Psed_4518 NC_015312.1 4846983 4847396 D KEGG: nml:Namu_1206 hypothetical protein; hypothetical protein 4846983..4847396 Pseudonocardia dioxanivorans CB1190 10366362 YP_004334527.1 CDS Psed_4520 NC_015312.1 4848054 4848476 R KEGG: amd:AMED_8411 aromatic compounds degradation protein PaaI; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein complement(4848054..4848476) Pseudonocardia dioxanivorans CB1190 10366364 YP_004334528.1 CDS Psed_4521 NC_015312.1 4848556 4849353 D PFAM: Crotonase, core; KEGG: svi:Svir_12770 enoyl-CoA hydratase; enoyl-CoA hydratase 4848556..4849353 Pseudonocardia dioxanivorans CB1190 10366365 YP_004334529.1 CDS Psed_4522 NC_015312.1 4849362 4849955 R TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: tcu:Tcur_2648 hypothetical protein; hypothetical protein complement(4849362..4849955) Pseudonocardia dioxanivorans CB1190 10366366 YP_004334530.1 CDS Psed_4523 NC_015312.1 4850034 4850882 D KEGG: nca:Noca_0781 silent information regulator protein Sir2; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; NAD-dependent deacetylase 4850034..4850882 Pseudonocardia dioxanivorans CB1190 10366367 YP_004334531.1 CDS Psed_4524 NC_015312.1 4850901 4851263 R PFAM: Barstar (barnase inhibitor); KEGG: svi:Svir_12760 barstar (barnase inhibitor); barnase inhibitor protein complement(4850901..4851263) Pseudonocardia dioxanivorans CB1190 10366368 YP_004334532.1 CDS Psed_4525 NC_015312.1 4851381 4851827 R PFAM: Guanine-specific ribonuclease N1/T1; KEGG: sen:SACE_1461 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 complement(4851381..4851827) Pseudonocardia dioxanivorans CB1190 10366369 YP_004334533.1 CDS Psed_4526 NC_015312.1 4851856 4852113 R KEGG: amd:AMED_6669 hypothetical protein; hypothetical protein complement(4851856..4852113) Pseudonocardia dioxanivorans CB1190 10366370 YP_004334534.1 CDS Psed_4527 NC_015312.1 4852166 4853131 D KEGG: svi:Svir_12740 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase 4852166..4853131 Pseudonocardia dioxanivorans CB1190 10366371 YP_004334535.1 CDS Psed_4529 NC_015312.1 4853723 4855579 R SMART: Translation elongation factor EFG/EF2, C-terminal; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; KEGG: mva:Mvan_3881 GTP-binding protein LepA; HAMAP: GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein LepA complement(4853723..4855579) Pseudonocardia dioxanivorans CB1190 10366373 YP_004334536.1 CDS Psed_4530 NC_015312.1 4855731 4856942 D KEGG: gob:Gobs_4815 hypothetical protein; hypothetical protein 4855731..4856942 Pseudonocardia dioxanivorans CB1190 10366374 YP_004334537.1 CDS Psed_4531 NC_015312.1 4857129 4857716 R KEGG: sro:Sros_3208 hypothetical protein; hypothetical protein complement(4857129..4857716) Pseudonocardia dioxanivorans CB1190 10366375 YP_004334538.1 CDS Psed_4532 NC_015312.1 4857822 4858742 D KEGG: sen:SACE_2650 integral membrane protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 4857822..4858742 Pseudonocardia dioxanivorans CB1190 10366376 YP_004334539.1 CDS Psed_4533 NC_015312.1 4858753 4858962 D KEGG: sen:SACE_2651 hypothetical protein; hypothetical protein 4858753..4858962 Pseudonocardia dioxanivorans CB1190 10366377 YP_004334540.1 CDS Psed_4534 NC_015312.1 4859142 4860845 R PFAM: NLP/P60; KEGG: fra:Francci3_1696 NLP/P60; NLP/P60 protein complement(4859142..4860845) Pseudonocardia dioxanivorans CB1190 10366378 YP_004334541.1 CDS Psed_4535 NC_015312.1 4860962 4861618 R KEGG: mil:ML5_2851 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator complement(4860962..4861618) Pseudonocardia dioxanivorans CB1190 10366379 YP_004334542.1 CDS Psed_4536 NC_015312.1 4861622 4863040 R PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; KEGG: sro:Sros_6198 signal transduction histidine kinase-like protein; histidine kinase complement(4861622..4863040) Pseudonocardia dioxanivorans CB1190 10366380 YP_004334543.1 CDS Psed_4537 NC_015312.1 4863404 4864426 D KEGG: nml:Namu_0595 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase-like protein; 3-methyl-adenine DNA glycosylase 4863404..4864426 Pseudonocardia dioxanivorans CB1190 10366381 YP_004334544.1 CDS Psed_4538 NC_015312.1 4864588 4865211 D KEGG: mlu:Mlut_22490 hypothetical protein; hypothetical protein 4864588..4865211 Pseudonocardia dioxanivorans CB1190 10366382 YP_004334545.1 CDS Psed_4539 NC_015312.1 4865258 4866061 R PFAM: Crotonase, core; KEGG: amd:AMED_3863 enoyl-CoA hydratase; enoyl-CoA hydratase complement(4865258..4866061) Pseudonocardia dioxanivorans CB1190 10366383 YP_004334546.1 CDS Psed_4540 NC_015312.1 4866092 4866751 D PFAM: O-methyltransferase, family 3; KEGG: fri:FraEuI1c_4952 O-methyltransferase 3; O-methyltransferase protein 4866092..4866751 Pseudonocardia dioxanivorans CB1190 10366384 YP_004334547.1 CDS Psed_4541 NC_015312.1 4866888 4867697 R manually curated; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; KEGG: amd:AMED_0827 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(4866888..4867697) Pseudonocardia dioxanivorans CB1190 10366385 YP_004334548.1 CDS Psed_4542 NC_015312.1 4867747 4868187 D PFAM: Protein of unknown function DUF2000; KEGG: fal:FRAAL2351 hypothetical protein; hypothetical protein 4867747..4868187 Pseudonocardia dioxanivorans CB1190 10366386 YP_004334549.1 CDS Psed_4543 NC_015312.1 4868235 4869392 D KEGG: fri:FraEuI1c_1834 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase 4868235..4869392 Pseudonocardia dioxanivorans CB1190 10366387 YP_004334550.1 CDS Psed_4545 NC_015312.1 4870413 4870811 R KEGG: ami:Amir_1368 cytochrome-c oxidase; cytochrome-c oxidase complement(4870413..4870811) Pseudonocardia dioxanivorans CB1190 10366389 YP_004334551.1 CDS Psed_4546 NC_015312.1 4870830 4871777 R KEGG: svi:Svir_10630 heme/copper-type cytochrome/quinol oxidases, subunit 2; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; cytochrome c oxidase subunit II complement(4870830..4871777) Pseudonocardia dioxanivorans CB1190 10366390 YP_004334552.1 CDS Psed_4547 NC_015312.1 4871965 4873878 D TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: svi:Svir_10620 asparagine synthase (glutamine-hydrolysing); PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase 4871965..4873878 Pseudonocardia dioxanivorans CB1190 10366391 YP_004334553.1 CDS Psed_4548 NC_015312.1 4873969 4874991 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: stp:Strop_0264 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4873969..4874991 Pseudonocardia dioxanivorans CB1190 10366392 YP_004334554.1 CDS Psed_4549 NC_015312.1 4875160 4876185 D KEGG: ami:Amir_0660 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 4875160..4876185 Pseudonocardia dioxanivorans CB1190 10366393 YP_004334555.1 CDS Psed_4550 NC_015312.1 4876101 4876967 R TIGRFAM: Diacylglycerol/lipid kinase; PFAM: Diacylglycerol kinase, catalytic domain; KEGG: tcu:Tcur_1799 diacylglycerol kinase catalytic subunit; SMART: Diacylglycerol kinase, catalytic domain; hypothetical protein complement(4876101..4876967) Pseudonocardia dioxanivorans CB1190 10366394 YP_004334556.1 CDS Psed_4551 NC_015312.1 4876964 4878532 R KEGG: tcu:Tcur_1798 alkylglycerone-phosphate synthase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; alkylglycerone-phosphate synthase complement(4876964..4878532) Pseudonocardia dioxanivorans CB1190 10366395 YP_004334557.1 CDS Psed_4552 NC_015312.1 4878597 4879157 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: stp:Strop_2581 regulatory protein, TetR; TetR family transcriptional regulator 4878597..4879157 Pseudonocardia dioxanivorans CB1190 10366396 YP_004334558.1 CDS Psed_4553 NC_015312.1 4879154 4880671 D KEGG: saq:Sare_2773 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 4879154..4880671 Pseudonocardia dioxanivorans CB1190 10366397 YP_004334559.1 CDS Psed_4554 NC_015312.1 4880797 4881774 R KEGG: amd:AMED_2190 adenosine kinase; PFAM: Carbohydrate/purine kinase; adenosine kinase complement(4880797..4881774) Pseudonocardia dioxanivorans CB1190 10366398 YP_004334560.1 CDS Psed_4555 NC_015312.1 4881890 4882264 R KEGG: svi:Svir_10610 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein complement(4881890..4882264) Pseudonocardia dioxanivorans CB1190 10366399 YP_004334561.1 CDS Psed_4556 NC_015312.1 4882407 4883540 R TIGRFAM: Glycerate kinase; KEGG: mil:ML5_3725 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase complement(4882407..4883540) Pseudonocardia dioxanivorans CB1190 10366400 YP_004334562.1 CDS Psed_4557 NC_015312.1 4883574 4884230 D KEGG: ami:Amir_1363 hypothetical protein; hypothetical protein 4883574..4884230 Pseudonocardia dioxanivorans CB1190 10366401 YP_004334563.1 CDS Psed_4558 NC_015312.1 4884233 4884754 D KEGG: sen:SACE_1651 cobinamide kinase / conamide phosphate guanylyltransferase; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase; adenosylcobinamide-phosphate guanylyltransferase 4884233..4884754 Pseudonocardia dioxanivorans CB1190 10366402 YP_004334564.1 CDS Psed_4559 NC_015312.1 4884775 4885830 D KEGG: amd:AMED_2180 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4884775..4885830 Pseudonocardia dioxanivorans CB1190 10366403 YP_004334565.1 CDS Psed_4560 NC_015312.1 4885827 4886597 D KEGG: sen:SACE_1649 cobalamin 5'-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; cobalamin synthase 4885827..4886597 Pseudonocardia dioxanivorans CB1190 10366404 YP_004334566.1 CDS Psed_4561 NC_015312.1 4886620 4887726 R TIGRFAM: Branched-chain amino acid aminotransferase II; KEGG: nml:Namu_1869 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase complement(4886620..4887726) Pseudonocardia dioxanivorans CB1190 10366405 YP_004334567.1 CDS Psed_4562 NC_015312.1 4887802 4889091 R PFAM: Amino acid permease domain; KEGG: stp:Strop_0237 amino acid permease-associated region; amino acid permease complement(4887802..4889091) Pseudonocardia dioxanivorans CB1190 10366406 YP_004334568.1 CDS Psed_4563 NC_015312.1 4889236 4890741 D HAMAP: Peptidase, M17, probable cytosol aminopeptidase; KEGG: sen:SACE_1642 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 4889236..4890741 Pseudonocardia dioxanivorans CB1190 10366407 YP_004334569.1 CDS Psed_4564 NC_015312.1 4890765 4891133 R KEGG: mva:Mvan_3578 hypothetical protein; hypothetical protein complement(4890765..4891133) Pseudonocardia dioxanivorans CB1190 10366408 YP_004334570.1 CDS Psed_4565 NC_015312.1 4891335 4892729 D TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: svi:Svir_10500 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 4891335..4892729 Pseudonocardia dioxanivorans CB1190 10366409 YP_004334571.1 CDS Psed_4566 NC_015312.1 4892785 4894629 D KEGG: sen:SACE_1638 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; 2-oxoglutarate dehydrogenase E2 4892785..4894629 Pseudonocardia dioxanivorans CB1190 10366410 YP_004334572.1 CDS Psed_4567 NC_015312.1 4894712 4895596 D PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: rop:ROP_08790 hypothetical protein; hypothetical protein 4894712..4895596 Pseudonocardia dioxanivorans CB1190 10366411 YP_004334573.1 CDS Psed_4568 NC_015312.1 4895626 4896393 D PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: svi:Svir_10460 lipoate-protein ligase B; Octanoyltransferase 4895626..4896393 Pseudonocardia dioxanivorans CB1190 10366412 YP_004334574.1 CDS Psed_4569 NC_015312.1 4896431 4897090 R KEGG: rer:RER_01610 hypothetical protein; hypothetical protein complement(4896431..4897090) Pseudonocardia dioxanivorans CB1190 10366413 YP_004334575.1 CDS Psed_4570 NC_015312.1 4897170 4898105 R KEGG: amd:AMED_2163 monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(4897170..4898105) Pseudonocardia dioxanivorans CB1190 10366414 YP_004334576.1 CDS Psed_4571 NC_015312.1 4898249 4899253 D KEGG: amd:AMED_1817 lipoic acid synthetase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB; lipoyl synthase 4898249..4899253 Pseudonocardia dioxanivorans CB1190 10366415 YP_004334577.1 CDS Psed_4572 NC_015312.1 4899271 4900005 D KEGG: rop:ROP_08820 hypothetical membrane protein; hypothetical protein 4899271..4900005 Pseudonocardia dioxanivorans CB1190 10366416 YP_004334578.1 CDS Psed_4573 NC_015312.1 4900066 4900539 R PFAM: RDD; KEGG: mva:Mvan_3584 RDD domain-containing protein; RDD domain-containing protein complement(4900066..4900539) Pseudonocardia dioxanivorans CB1190 10366417 YP_004334579.1 CDS Psed_4574 NC_015312.1 4900722 4902143 D TIGRFAM: Glutamine synthetase type I; KEGG: ami:Amir_0925 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; glutamine synthetase 4900722..4902143 Pseudonocardia dioxanivorans CB1190 10366418 YP_004334580.1 CDS Psed_4575 NC_015312.1 4902377 4903081 D KEGG: sro:Sros_2262 hypothetical protein; hypothetical protein 4902377..4903081 Pseudonocardia dioxanivorans CB1190 10366419 YP_004334581.1 CDS Psed_4576 NC_015312.1 4903105 4903878 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: ach:Achl_3639 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4903105..4903878) Pseudonocardia dioxanivorans CB1190 10366420 YP_004334582.1 CDS Psed_4577 NC_015312.1 4904028 4904228 D KEGG: pca:Pcar_2806 cold shock proteins; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock protein DNA-binding protein 4904028..4904228 Pseudonocardia dioxanivorans CB1190 10366421 YP_004334583.1 CDS Psed_4578 NC_015312.1 4904298 4905245 D KEGG: sen:SACE_6758 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 4904298..4905245 Pseudonocardia dioxanivorans CB1190 10366422 YP_004334584.1 CDS Psed_4579 NC_015312.1 4905291 4905950 R PFAM: Protein of unknown function DUF1211, TMEM175; KEGG: cwo:Cwoe_0449 protein of unknown function DUF1211; hypothetical protein complement(4905291..4905950) Pseudonocardia dioxanivorans CB1190 10366423 YP_004334585.1 CDS Psed_4580 NC_015312.1 4906032 4907465 D KEGG: gob:Gobs_3434 hypothetical protein; HAMAP: Uncharacterised protein family UPF0061; PFAM: Uncharacterised protein family UPF0061; hypothetical protein 4906032..4907465 Pseudonocardia dioxanivorans CB1190 10366424 YP_004334586.1 CDS Psed_4581 NC_015312.1 4907611 4910343 D TIGRFAM: Pyruvate, phosphate dikinase; KEGG: nml:Namu_4080 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; pyruvate, phosphate dikinase 4907611..4910343 Pseudonocardia dioxanivorans CB1190 10366425 YP_004334587.1 CDS Psed_4582 NC_015312.1 4910503 4914330 R PFAM: Acriflavin resistance protein; KEGG: sro:Sros_4438 hypothetical protein; acriflavin resistance protein complement(4910503..4914330) Pseudonocardia dioxanivorans CB1190 10366426 YP_004334588.1 CDS Psed_4583 NC_015312.1 4914414 4914842 R KEGG: sro:Sros_4541 hypothetical protein; hypothetical protein complement(4914414..4914842) Pseudonocardia dioxanivorans CB1190 10366427 YP_004334589.1 CDS Psed_4584 NC_015312.1 4914863 4915570 R KEGG: sro:Sros_6431 hypothetical protein; hypothetical protein complement(4914863..4915570) Pseudonocardia dioxanivorans CB1190 10366428 YP_004334590.1 CDS Psed_4585 NC_015312.1 4916205 4918154 R manually curated; KEGG: sti:Sthe_1357 peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase active site domain-containing protein complement(4916205..4918154) Pseudonocardia dioxanivorans CB1190 10366429 YP_004334591.1 CDS Psed_4586 NC_015312.1 4918440 4918772 R hypothetical protein complement(4918440..4918772) Pseudonocardia dioxanivorans CB1190 10366430 YP_004334592.1 CDS Psed_4587 NC_015312.1 4918769 4919533 R KEGG: amd:AMED_2939 hypothetical protein; hypothetical protein complement(4918769..4919533) Pseudonocardia dioxanivorans CB1190 10366431 YP_004334593.1 CDS Psed_4588 NC_015312.1 4919630 4919983 D KEGG: nml:Namu_5275 hypothetical protein; hypothetical protein 4919630..4919983 Pseudonocardia dioxanivorans CB1190 10366432 YP_004334594.1 CDS Psed_4589 NC_015312.1 4920102 4920872 R KEGG: amd:AMED_2353 succinate dehydrogenase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; PFAM: Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(4920102..4920872) Pseudonocardia dioxanivorans CB1190 10366433 YP_004334595.1 CDS Psed_4590 NC_015312.1 4920869 4922815 R KEGG: kfl:Kfla_5537 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase (ubiquinone) complement(4920869..4922815) Pseudonocardia dioxanivorans CB1190 10366434 YP_004334596.1 CDS Psed_4591 NC_015312.1 4922821 4923627 R KEGG: msp:Mspyr1_03630 hypothetical protein; hypothetical protein complement(4922821..4923627) Pseudonocardia dioxanivorans CB1190 10366435 YP_004334597.1 CDS Psed_4592 NC_015312.1 4923870 4924625 R KEGG: tcu:Tcur_1121 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; PFAM: 4Fe-4S binding domain; Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(4923870..4924625) Pseudonocardia dioxanivorans CB1190 10366436 YP_004334598.1 CDS Psed_4593 NC_015312.1 4924622 4926565 R TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; KEGG: mil:ML5_2258 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase or fumarate reductase, flavoprotein subunit complement(4924622..4926565) Pseudonocardia dioxanivorans CB1190 10366437 YP_004334599.1 CDS Psed_4594 NC_015312.1 4926577 4927233 R TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; KEGG: saq:Sare_1707 succinate dehydrogenase/fumarate reductase cytochrome b subunit; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family complement(4926577..4927233) Pseudonocardia dioxanivorans CB1190 10366438 YP_004334600.1 CDS Psed_4595 NC_015312.1 4927391 4928335 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nda:Ndas_3924 transcriptional regulator, LysR family; LysR family transcriptional regulator 4927391..4928335 Pseudonocardia dioxanivorans CB1190 10366439 YP_004334601.1 CDS Psed_4596 NC_015312.1 4929045 4930367 R KEGG: mau:Micau_1534 regulatory protein RecX; HAMAP: Regulatory protein RecX; PFAM: Regulatory protein RecX; Regulatory protein recX complement(4929045..4930367) Pseudonocardia dioxanivorans CB1190 10366440 YP_004334602.1 CDS Psed_4597 NC_015312.1 4930372 4931415 R SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: mjl:Mjls_2134 recombinase A; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; recombinase A complement(4930372..4931415) Pseudonocardia dioxanivorans CB1190 10366441 YP_004334603.1 CDS Psed_4598 NC_015312.1 4931770 4931964 R KEGG: nml:Namu_3995 hypothetical protein; hypothetical protein complement(4931770..4931964) Pseudonocardia dioxanivorans CB1190 10366442 YP_004334604.1 CDS Psed_4599 NC_015312.1 4932021 4933391 D PFAM: CoA-transferase III; KEGG: tbi:Tbis_0993 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4932021..4933391 Pseudonocardia dioxanivorans CB1190 10366443 YP_004334605.1 CDS Psed_4600 NC_015312.1 4933402 4933551 D hypothetical protein 4933402..4933551 Pseudonocardia dioxanivorans CB1190 10366444 YP_004334606.1 CDS Psed_4601 NC_015312.1 4933564 4934169 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_4955 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4933564..4934169) Pseudonocardia dioxanivorans CB1190 10366445 YP_004334607.1 CDS Psed_4602 NC_015312.1 4934228 4935166 D PFAM: Drug/metabolite transporter; KEGG: nda:Ndas_1398 protein of unknown function DUF6 transmembrane; hypothetical protein 4934228..4935166 Pseudonocardia dioxanivorans CB1190 10366446 YP_004334608.1 CDS Psed_4603 NC_015312.1 4935117 4939889 D KEGG: ami:Amir_1413 DEAD/H associated domain protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal; DEAD/H associated domain-containing protein 4935117..4939889 Pseudonocardia dioxanivorans CB1190 10366447 YP_004334609.1 CDS Psed_4604 NC_015312.1 4940319 4941290 D KEGG: req:REQ_00430 protein; hypothetical protein 4940319..4941290 Pseudonocardia dioxanivorans CB1190 10366448 YP_004334610.1 CDS Psed_4605 NC_015312.1 4941707 4943689 D TIGRFAM: Acetoacetyl-CoA synthase; KEGG: amd:AMED_3268 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; acetoacetyl-CoA synthase 4941707..4943689 Pseudonocardia dioxanivorans CB1190 10366449 YP_004334611.1 CDS Psed_4606 NC_015312.1 4943802 4944476 R hypothetical protein complement(4943802..4944476) Pseudonocardia dioxanivorans CB1190 10366450 YP_004334612.1 CDS Psed_4609 NC_015312.1 4945736 4945849 R hypothetical protein complement(4945736..4945849) Pseudonocardia dioxanivorans CB1190 10366453 YP_004334613.1 CDS Psed_4610 NC_015312.1 4945846 4946091 R hypothetical protein complement(4945846..4946091) Pseudonocardia dioxanivorans CB1190 10366454 YP_004334614.1 CDS Psed_4611 NC_015312.1 4946156 4946740 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sna:Snas_2881 transcriptional regulator, TetR family; TetR family transcriptional regulator 4946156..4946740 Pseudonocardia dioxanivorans CB1190 10366455 YP_004334615.1 CDS Psed_4613 NC_015312.1 4947403 4948578 R KEGG: req:REQ_47430 integral membrane protein; TIGRFAM: Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC; hypothetical protein complement(4947403..4948578) Pseudonocardia dioxanivorans CB1190 10366457 YP_004334616.1 CDS Psed_4614 NC_015312.1 4948696 4948986 R hypothetical protein complement(4948696..4948986) Pseudonocardia dioxanivorans CB1190 10366458 YP_004334617.1 CDS Psed_4615 NC_015312.1 4949031 4949669 R KEGG: cai:Caci_0175 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(4949031..4949669) Pseudonocardia dioxanivorans CB1190 10366459 YP_004334618.1 CDS Psed_4616 NC_015312.1 4949666 4950949 R KEGG: bcv:Bcav_3542 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; histidine kinase complement(4949666..4950949) Pseudonocardia dioxanivorans CB1190 10366460 YP_004334619.1 CDS Psed_4617 NC_015312.1 4950958 4951749 R PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_3543 ABC-2 type transporter; ABC transporter complement(4950958..4951749) Pseudonocardia dioxanivorans CB1190 10366461 YP_004334620.1 CDS Psed_4618 NC_015312.1 4951746 4952651 R PFAM: ABC transporter-like; KEGG: bcv:Bcav_3544 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(4951746..4952651) Pseudonocardia dioxanivorans CB1190 10366462 YP_004334621.1 CDS Psed_4619 NC_015312.1 4952884 4953732 D PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: ami:Amir_5790 DNA glycosylase/AP lyase, H2TH DNA-binding; SMART: DNA glycosylase/AP lyase, catalytic domain; DNA-(apurinic or apyrimidinic site) lyase 4952884..4953732 Pseudonocardia dioxanivorans CB1190 10366463 YP_004334622.1 CDS Psed_4620 NC_015312.1 4953796 4954614 R PFAM: PspA/IM30; KEGG: amd:AMED_6280 phage shock protein A; phage shock protein A, PspA complement(4953796..4954614) Pseudonocardia dioxanivorans CB1190 10366464 YP_004334623.1 CDS Psed_4621 NC_015312.1 4954923 4955294 R KEGG: sen:SACE_5879 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(4954923..4955294) Pseudonocardia dioxanivorans CB1190 10366465 YP_004334624.1 CDS Psed_4622 NC_015312.1 4955490 4956107 R KEGG: rop:ROP_67400 phosphatidylglycerophosphate synthase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(4955490..4956107) Pseudonocardia dioxanivorans CB1190 10366466 YP_004334625.1 CDS Psed_4623 NC_015312.1 4956121 4957608 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: ami:Amir_5800 MiaB-like tRNA modifying enzyme YliG; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; 30S ribosomal protein S12 methylthiotransferase complement(4956121..4957608) Pseudonocardia dioxanivorans CB1190 10366467 YP_004334626.1 CDS Psed_4624 NC_015312.1 4957653 4958150 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: nfa:nfa38590 N-acetylglutamate synthase; GCN5-like N-acetyltransferase 4957653..4958150 Pseudonocardia dioxanivorans CB1190 10366468 YP_004334627.1 CDS Psed_4625 NC_015312.1 4958224 4959045 D SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: fre:Franean1_7200 AraC family transcriptional regulator; AraC family transcriptional regulator 4958224..4959045 Pseudonocardia dioxanivorans CB1190 10366469 YP_004334628.1 CDS Psed_4626 NC_015312.1 4959101 4959604 D PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: svi:Svir_22350 predicted rRNA methylase SpoU family; tRNA/rRNA methyltransferase SpoU 4959101..4959604 Pseudonocardia dioxanivorans CB1190 10366470 YP_004334629.1 CDS Psed_4627 NC_015312.1 4959592 4960404 R KEGG: sco:SCO2566 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; hypothetical protein complement(4959592..4960404) Pseudonocardia dioxanivorans CB1190 10366471 YP_004334630.1 CDS Psed_4628 NC_015312.1 4960662 4963010 R KEGG: sen:SACE_5889 cell division FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; DNA translocase FtsK complement(4960662..4963010) Pseudonocardia dioxanivorans CB1190 10366472 YP_004334631.1 CDS Psed_4629 NC_015312.1 4963312 4963908 R PFAM: Protein of unknown function DUF2249; Cupin 2, conserved barrel; KEGG: nca:Noca_4862 hypothetical protein; hypothetical protein complement(4963312..4963908) Pseudonocardia dioxanivorans CB1190 10366473 YP_004334632.1 CDS Psed_4630 NC_015312.1 4963949 4964293 D PFAM: 4Fe-4S binding domain; KEGG: mav:MAV_3500 ferredoxin FdxA; 4Fe-4S ferredoxin 4963949..4964293 Pseudonocardia dioxanivorans CB1190 10366474 YP_004334633.1 CDS Psed_4631 NC_015312.1 4964290 4964970 D PFAM: LexA, DNA-binding domain; KEGG: nca:Noca_4860 transcriptional regulator; transcriptional regulator 4964290..4964970 Pseudonocardia dioxanivorans CB1190 10366475 YP_004334634.1 CDS Psed_4632 NC_015312.1 4964970 4965395 D KEGG: rha:RHA1_ro08094 hypothetical protein; hypothetical protein 4964970..4965395 Pseudonocardia dioxanivorans CB1190 10366476 YP_004334635.1 CDS Psed_4633 NC_015312.1 4965395 4965793 D PFAM: Cupin 2, conserved barrel; KEGG: nml:Namu_3635 MarR family transcriptional regulator; cupin 4965395..4965793 Pseudonocardia dioxanivorans CB1190 10366477 YP_004334636.1 CDS Psed_4634 NC_015312.1 4965965 4966849 D KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 4965965..4966849 Pseudonocardia dioxanivorans CB1190 10366478 YP_004334637.1 CDS Psed_4635 NC_015312.1 4966874 4967776 R PFAM: Isocitrate lyase/phosphorylmutase; KEGG: aco:Amico_1318 carboxyvinyl-carboxyphosphonatephosphorylmutase; isocitrate lyase and phosphorylmutase complement(4966874..4967776) Pseudonocardia dioxanivorans CB1190 10366479 YP_004334638.1 CDS Psed_4636 NC_015312.1 4967901 4968602 D KEGG: fri:FraEuI1c_4418 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 4967901..4968602 Pseudonocardia dioxanivorans CB1190 10366480 YP_004334639.1 CDS Psed_4637 NC_015312.1 4968599 4970644 D KEGG: gbr:Gbro_2860 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 4968599..4970644 Pseudonocardia dioxanivorans CB1190 10366481 YP_004334640.1 CDS Psed_4638 NC_015312.1 4970651 4972549 D KEGG: gbr:Gbro_2859 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase 4970651..4972549 Pseudonocardia dioxanivorans CB1190 10366482 YP_004334641.1 CDS Psed_4639 NC_015312.1 4972546 4973166 D PFAM: Isochorismatase-like; KEGG: gbr:Gbro_2858 isochorismatase hydrolase; isochorismatase hydrolase 4972546..4973166 Pseudonocardia dioxanivorans CB1190 10366483 YP_004334642.1 CDS Psed_4640 NC_015312.1 4973235 4973420 R hypothetical protein complement(4973235..4973420) Pseudonocardia dioxanivorans CB1190 10366484 YP_004334643.1 CDS Psed_4641 NC_015312.1 4973446 4974843 R PFAM: Amidase; KEGG: sna:Snas_3274 amidase; amidase complement(4973446..4974843) Pseudonocardia dioxanivorans CB1190 10366485 YP_004334644.1 CDS Psed_4642 NC_015312.1 4974858 4976291 R PFAM: Amidase; KEGG: sti:Sthe_2520 amidase; amidase complement(4974858..4976291) Pseudonocardia dioxanivorans CB1190 10366486 YP_004334645.1 CDS Psed_4644 NC_015312.1 4977775 4979358 R PFAM: Amidase; KEGG: htu:Htur_4354 amidase; amidase complement(4977775..4979358) Pseudonocardia dioxanivorans CB1190 10366488 YP_004334646.1 CDS Psed_4645 NC_015312.1 4979478 4981103 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mdi:METDI1865 dipeptide transporter; periplasmic binding component of ABC superfamily (DppA-like); ABC transporter substrate-binding protein complement(4979478..4981103) Pseudonocardia dioxanivorans CB1190 10366489 YP_004334647.1 CDS Psed_4646 NC_015312.1 4981197 4982147 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: gtn:GTNG_0477 oligopeptide ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(4981197..4982147) Pseudonocardia dioxanivorans CB1190 10366490 YP_004334648.1 CDS Psed_4647 NC_015312.1 4982144 4983175 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: nfa:nfa1670 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(4982144..4983175) Pseudonocardia dioxanivorans CB1190 10366491 YP_004334649.1 CDS Psed_4648 NC_015312.1 4983172 4984065 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120432 permease component of ABC transporter; ABC transporter permease complement(4983172..4984065) Pseudonocardia dioxanivorans CB1190 10366492 YP_004334650.1 CDS Psed_4649 NC_015312.1 4984117 4985061 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1085 dipeptide transport system permease DppB; ABC transporter permease complement(4984117..4985061) Pseudonocardia dioxanivorans CB1190 10366493 YP_004334651.1 CDS Psed_4650 NC_015312.1 4985061 4985951 R KEGG: nfa:nfa24460 transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(4985061..4985951) Pseudonocardia dioxanivorans CB1190 10366494 YP_004334652.1 CDS Psed_4651 NC_015312.1 4986047 4987831 R KEGG: ami:Amir_5806 beta-lactamase domain protein; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(4986047..4987831) Pseudonocardia dioxanivorans CB1190 10366495 YP_004334653.1 CDS Psed_4652 NC_015312.1 4987828 4988769 R PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: svi:Svir_25250 dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(4987828..4988769) Pseudonocardia dioxanivorans CB1190 10366496 YP_004334654.1 CDS Psed_4653 NC_015312.1 4989000 4989626 R TIGRFAM: Conserved hypothetical protein CHP03085; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: sen:SACE_5900 hypothetical protein; hypothetical protein complement(4989000..4989626) Pseudonocardia dioxanivorans CB1190 10366497 YP_004334655.1 CDS Psed_4654 NC_015312.1 4989871 4990623 R PFAM: Thymidylate synthase ThyX; TIGRFAM: Thymidylate synthase ThyX; HAMAP: Thymidylate synthase ThyX; KEGG: sen:SACE_5902 FAD-dependent thymidylate synthase; thymidylate synthase complement(4989871..4990623) Pseudonocardia dioxanivorans CB1190 10366498 YP_004334656.1 CDS Psed_4655 NC_015312.1 4990783 4991334 D PFAM: Protein of unknown function DUF1778; KEGG: sen:SACE_5903 hypothetical protein; hypothetical protein 4990783..4991334 Pseudonocardia dioxanivorans CB1190 10366499 YP_004334657.1 CDS Psed_4656 NC_015312.1 4991340 4992392 D KEGG: ami:Amir_5813 hypothetical protein; hypothetical protein 4991340..4992392 Pseudonocardia dioxanivorans CB1190 10366500 YP_004334658.1 CDS Psed_4657 NC_015312.1 4992632 4993858 R PFAM: Protein of unknown function DUF1006; KEGG: amd:AMED_6308 hypothetical protein; hypothetical protein complement(4992632..4993858) Pseudonocardia dioxanivorans CB1190 10366501 YP_004334659.1 CDS Psed_4658 NC_015312.1 4993855 4994868 R PFAM: Drug/metabolite transporter; KEGG: sro:Sros_0382 hypothetical protein; hypothetical protein complement(4993855..4994868) Pseudonocardia dioxanivorans CB1190 10366502 YP_004334660.1 CDS Psed_4659 NC_015312.1 4994953 4995504 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_6309 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4994953..4995504 Pseudonocardia dioxanivorans CB1190 10366503 YP_004334661.1 CDS Psed_4660 NC_015312.1 4995510 4996283 R PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase, bacterial/plant; KEGG: rop:ROP_67260 dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(4995510..4996283) Pseudonocardia dioxanivorans CB1190 10366504 YP_004334662.1 CDS Psed_4661 NC_015312.1 4996280 4996753 R PFAM: Protein of unknown function DUF456; KEGG: nfa:nfa53640 hypothetical protein; hypothetical protein complement(4996280..4996753) Pseudonocardia dioxanivorans CB1190 10366505 YP_004334663.1 CDS Psed_4662 NC_015312.1 4996788 4998128 R KEGG: sen:SACE_5913 zinc protease; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; processing peptidase complement(4996788..4998128) Pseudonocardia dioxanivorans CB1190 10366506 YP_004334664.1 CDS Psed_4663 NC_015312.1 4998125 5000377 R KEGG: ami:Amir_5823 polynucleotide phosphorylase/polyadenylase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; TIGRFAM: Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; polyribonucleotide nucleotidyltransferase complement(4998125..5000377) Pseudonocardia dioxanivorans CB1190 10366507 YP_004334665.1 CDS Psed_4664 NC_015312.1 5000660 5000929 R KEGG: mjl:Mjls_2082 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 complement(5000660..5000929) Pseudonocardia dioxanivorans CB1190 10366508 YP_004334666.1 CDS Psed_4665 NC_015312.1 5001129 5001830 R KEGG: ami:Amir_5826 hypothetical protein; hypothetical protein complement(5001129..5001830) Pseudonocardia dioxanivorans CB1190 10366509 YP_004334667.1 CDS Psed_4666 NC_015312.1 5001927 5002853 R SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: req:REQ_19270 riboflavin kinase; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF complement(5001927..5002853) Pseudonocardia dioxanivorans CB1190 10366510 YP_004334668.1 CDS Psed_4667 NC_015312.1 5002864 5003760 R TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: ami:Amir_5828 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal; tRNA pseudouridine synthase B complement(5002864..5003760) Pseudonocardia dioxanivorans CB1190 10366511 YP_004334669.1 CDS Psed_4668 NC_015312.1 5004109 5005473 R KEGG: amd:AMED_6327 DNA-damage-inducible protein F; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein; MATE efflux family protein complement(5004109..5005473) Pseudonocardia dioxanivorans CB1190 10366512 YP_004334670.1 CDS Psed_4669 NC_015312.1 5005470 5006129 R KEGG: svi:Svir_19850 phospholipid N-methyltransferase; phospholipid N-methyltransferase complement(5005470..5006129) Pseudonocardia dioxanivorans CB1190 10366513 YP_004334671.1 CDS Psed_4670 NC_015312.1 5006165 5007157 R PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: ami:Amir_5831 phosphoesterase RecJ domain protein; phosphoesterase RecJ domain-containing protein complement(5006165..5007157) Pseudonocardia dioxanivorans CB1190 10366514 YP_004334672.1 CDS Psed_4671 NC_015312.1 5007157 5007606 R TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: svi:Svir_14590 ribosome-binding factor A; PFAM: Ribosome-binding factor A; ribosome-binding factor A complement(5007157..5007606) Pseudonocardia dioxanivorans CB1190 10366515 YP_004334673.1 CDS Psed_4672 NC_015312.1 5007665 5007961 R PFAM: Protein of unknown function DUF503; KEGG: sen:SACE_5925 hypothetical protein; hypothetical protein complement(5007665..5007961) Pseudonocardia dioxanivorans CB1190 10366516 YP_004334674.1 CDS Psed_4673 NC_015312.1 5008016 5009851 R TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; KEGG: ami:Amir_5834 translation initiation factor IF-2; SMART: Ras small GTPase, Ras type; translation initiation factor IF-2 complement(5008016..5009851) Pseudonocardia dioxanivorans CB1190 10366517 YP_004334675.1 CDS Psed_4675 NC_015312.1 5011565 5012611 R TIGRFAM: Transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal; KEGG: ami:Amir_5836 transcription elongation factor NusA; SMART: RNA-binding domain, S1; K Homology; NusA antitermination factor complement(5011565..5012611) Pseudonocardia dioxanivorans CB1190 10366519 YP_004334676.1 CDS Psed_4676 NC_015312.1 5012608 5013138 R KEGG: svi:Svir_14540 hypothetical protein; HAMAP: Ribosome maturation factor RimP; PFAM: Ribosome maturation factor RimP; ribosome maturation factor rimP complement(5012608..5013138) Pseudonocardia dioxanivorans CB1190 10366520 YP_004334677.1 CDS Psed_4677 NC_015312.1 5013283 5013792 D KEGG: rer:RER_26280 hypothetical protein; hypothetical protein 5013283..5013792 Pseudonocardia dioxanivorans CB1190 10366521 YP_004334678.1 CDS Psed_4678 NC_015312.1 5013789 5014259 D KEGG: amd:AMED_6342 hypothetical protein; hypothetical protein 5013789..5014259 Pseudonocardia dioxanivorans CB1190 10366522 YP_004334679.1 CDS Psed_4679 NC_015312.1 5014285 5015316 R PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: ami:Amir_5841 aminotransferase class V; class V aminotransferase complement(5014285..5015316) Pseudonocardia dioxanivorans CB1190 10366523 YP_004334680.1 CDS Psed_4680 NC_015312.1 5015356 5015766 D KEGG: sen:SACE_5933 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047; hypothetical protein 5015356..5015766 Pseudonocardia dioxanivorans CB1190 10366524 YP_004334681.1 CDS Psed_4681 NC_015312.1 5015769 5016581 R PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; KEGG: scb:SCAB_53331 hypothetical protein; intradiol ring-cleavage dioxygenase complement(5015769..5016581) Pseudonocardia dioxanivorans CB1190 10366525 YP_004334682.1 CDS Psed_4682 NC_015312.1 5016682 5018415 R PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase, class IIa, bacterial; KEGG: svi:Svir_10160 prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(5016682..5018415) Pseudonocardia dioxanivorans CB1190 10366526 YP_004334683.1 CDS Psed_4683 NC_015312.1 5018666 5019613 D KEGG: amd:AMED_5707 cold shock protein CspA; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 5018666..5019613 Pseudonocardia dioxanivorans CB1190 10366527 YP_004334684.1 CDS Psed_4684 NC_015312.1 5019725 5020342 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: kfl:Kfla_4294 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein complement(5019725..5020342) Pseudonocardia dioxanivorans CB1190 10366528 YP_004334685.1 CDS Psed_4685 NC_015312.1 5020359 5021513 R KEGG: tfu:Tfu_2822 homoserine O-acetyltransferase; manually curated; TIGRFAM: Homoserine acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; HAMAP: Homoserine acetyltransferase; homoserine O-acetyltransferase complement(5020359..5021513) Pseudonocardia dioxanivorans CB1190 10366529 YP_004334686.1 CDS Psed_4686 NC_015312.1 5021510 5022823 R TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: amd:AMED_7929 O-acetylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(5021510..5022823) Pseudonocardia dioxanivorans CB1190 10366530 YP_004334687.1 CDS Psed_4687 NC_015312.1 5023131 5023877 D PFAM: Uncharacterised protein family UPF0246; KEGG: mjl:Mjls_2726 hypothetical protein; hypothetical protein 5023131..5023877 Pseudonocardia dioxanivorans CB1190 10366531 YP_004334688.1 CDS Psed_4688 NC_015312.1 5024035 5025153 D PFAM: Polysaccharide deacetylase; KEGG: amd:AMED_3934 hypothetical protein; polysaccharide deacetylase 5024035..5025153 Pseudonocardia dioxanivorans CB1190 10366532 YP_004334689.1 CDS Psed_4689 NC_015312.1 5025562 5026530 D KEGG: amd:AMED_2059 RIO kinase 1; PFAM: RIO-like kinase; SMART: RIO kinase; RIO-like kinase 5025562..5026530 Pseudonocardia dioxanivorans CB1190 10366533 YP_004334690.1 CDS Psed_4690 NC_015312.1 5026742 5028256 D KEGG: ami:Amir_5853 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 5026742..5028256 Pseudonocardia dioxanivorans CB1190 10366534 YP_004334691.1 CDS Psed_4691 NC_015312.1 5028430 5029527 R KEGG: ace:Acel_1446 cysteine--tRNA ligase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteine--tRNA ligase complement(5028430..5029527) Pseudonocardia dioxanivorans CB1190 10366535 YP_004334692.1 CDS Psed_4692 NC_015312.1 5029529 5030038 R KEGG: cai:Caci_7191 hypothetical protein; hypothetical protein complement(5029529..5030038) Pseudonocardia dioxanivorans CB1190 10366536 YP_004334693.1 CDS Psed_4693 NC_015312.1 5030165 5030659 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ami:Amir_5865 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(5030165..5030659) Pseudonocardia dioxanivorans CB1190 10366537 YP_004334694.1 CDS Psed_4694 NC_015312.1 5030716 5032116 D TIGRFAM: Mycothione reductase; KEGG: rha:RHA1_ro06610 mycothione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mycothione reductase 5030716..5032116 Pseudonocardia dioxanivorans CB1190 10366538 YP_004334695.1 CDS Psed_4695 NC_015312.1 5032229 5033197 D KEGG: ami:Amir_0660 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; stearoyl-CoA 9-desaturase 5032229..5033197 Pseudonocardia dioxanivorans CB1190 10366539 YP_004334696.1 CDS Psed_4696 NC_015312.1 5033205 5033981 R KEGG: amd:AMED_6935 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(5033205..5033981) Pseudonocardia dioxanivorans CB1190 10366540 YP_004334697.1 CDS Psed_4697 NC_015312.1 5034203 5034928 D KEGG: sen:SACE_6750 hypothetical protein; hypothetical protein 5034203..5034928 Pseudonocardia dioxanivorans CB1190 10366541 YP_004334698.1 CDS Psed_4698 NC_015312.1 5034925 5036214 D PFAM: Amine oxidase; KEGG: sgr:SGR_5877 amine oxidoreductase; amine oxidase 5034925..5036214 Pseudonocardia dioxanivorans CB1190 10366542 YP_004334699.1 CDS Psed_4699 NC_015312.1 5036211 5036984 D PFAM: Protein of unknown function DUF1365; KEGG: rer:RER_23220 hypothetical protein; hypothetical protein 5036211..5036984 Pseudonocardia dioxanivorans CB1190 10366543 YP_004334700.1 CDS Psed_4700 NC_015312.1 5036981 5038237 D KEGG: amd:AMED_2870 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5036981..5038237 Pseudonocardia dioxanivorans CB1190 10366544 YP_004334701.1 CDS Psed_4701 NC_015312.1 5038297 5039673 D KEGG: amd:AMED_2950 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5038297..5039673 Pseudonocardia dioxanivorans CB1190 10366545 YP_004334702.1 CDS Psed_4702 NC_015312.1 5039670 5040503 D PFAM: Protein of unknown function DUF1295; KEGG: cai:Caci_4267 protein of unknown function DUF1295; hypothetical protein 5039670..5040503 Pseudonocardia dioxanivorans CB1190 10366546 YP_004334703.1 CDS Psed_4703 NC_015312.1 5040570 5041034 D PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: tcu:Tcur_1893 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 5040570..5041034 Pseudonocardia dioxanivorans CB1190 10366547 YP_004334704.1 CDS Psed_4704 NC_015312.1 5041096 5041677 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: nda:Ndas_0741 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein complement(5041096..5041677) Pseudonocardia dioxanivorans CB1190 10366548 YP_004334705.1 CDS Psed_4705 NC_015312.1 5041689 5042747 R TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: sen:SACE_5989 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase complement(5041689..5042747) Pseudonocardia dioxanivorans CB1190 10366549 YP_004334706.1 CDS Psed_4706 NC_015312.1 5042864 5043265 R KEGG: bcv:Bcav_2730 transmembrane protein; transmembrane protein complement(5042864..5043265) Pseudonocardia dioxanivorans CB1190 10366550 YP_004334707.1 CDS Psed_4707 NC_015312.1 5043330 5045195 R PFAM: Penicillin-binding protein, transpeptidase; NTF2-like N-terminal transpeptidase; KEGG: amd:AMED_2045 penicillin-binding protein, transpeptidase; penicillin-binding protein transpeptidase complement(5043330..5045195) Pseudonocardia dioxanivorans CB1190 10366551 YP_004334708.1 CDS Psed_4708 NC_015312.1 5045278 5046111 R KEGG: ami:Amir_5887 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; GCN5-like N-acetyltransferase complement(5045278..5046111) Pseudonocardia dioxanivorans CB1190 10366552 YP_004334709.1 CDS Psed_4709 NC_015312.1 5046210 5047352 R TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: sen:SACE_5992 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(5046210..5047352) Pseudonocardia dioxanivorans CB1190 10366553 YP_004334710.1 CDS Psed_4710 NC_015312.1 5047461 5047952 R KEGG: fri:FraEuI1c_2951 hypothetical protein; hypothetical protein complement(5047461..5047952) Pseudonocardia dioxanivorans CB1190 10366554 YP_004334711.1 CDS Psed_4711 NC_015312.1 5047955 5049151 R PFAM: Peptidase M50; PDZ/DHR/GLGF; KEGG: ami:Amir_5889 peptidase M50; peptidase M50 complement(5047955..5049151) Pseudonocardia dioxanivorans CB1190 10366555 YP_004334712.1 CDS Psed_4712 NC_015312.1 5049155 5050375 R PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: ami:Amir_5890 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(5049155..5050375) Pseudonocardia dioxanivorans CB1190 10366556 YP_004334713.1 CDS Psed_4713 NC_015312.1 5050464 5050724 D KEGG: amd:AMED_2035 hypothetical protein; hypothetical protein 5050464..5050724 Pseudonocardia dioxanivorans CB1190 10366557 YP_004334714.1 CDS Psed_4714 NC_015312.1 5050741 5051712 D KEGG: rop:ROP_52850 hypothetical protein; manually curated; PFAM: DNA primase, small subunit; DNA primase small subunit 5050741..5051712 Pseudonocardia dioxanivorans CB1190 10366558 YP_004334715.1 CDS Psed_4715 NC_015312.1 5051764 5052402 R TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: gob:Gobs_1595 hypothetical protein; hypothetical protein complement(5051764..5052402) Pseudonocardia dioxanivorans CB1190 10366559 YP_004334716.1 CDS Psed_4716 NC_015312.1 5052467 5052904 D KEGG: kfl:Kfla_5255 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 5052467..5052904 Pseudonocardia dioxanivorans CB1190 10366560 YP_004334717.1 CDS Psed_4717 NC_015312.1 5052895 5053482 R PFAM: Uracil-DNA glycosylase-like; KEGG: tcu:Tcur_1752 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase complement(5052895..5053482) Pseudonocardia dioxanivorans CB1190 10366561 YP_004334718.1 CDS Psed_4718 NC_015312.1 5053537 5054607 D PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: mpa:MAP0341 ATP-dependent DNA ligase; ATP dependent DNA ligase 5053537..5054607 Pseudonocardia dioxanivorans CB1190 10366562 YP_004334719.1 CDS Psed_4719 NC_015312.1 5054611 5055717 R TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: gbr:Gbro_2114 radical SAM enzyme, Cfr family; PFAM: Radical SAM; ribosomal RNA large subunit methyltransferase N complement(5054611..5055717) Pseudonocardia dioxanivorans CB1190 10366563 YP_004334720.1 CDS Psed_4720 NC_015312.1 5055745 5056227 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: bcv:Bcav_4163 pyridoxamine 5'-phosphate oxidase-related protein FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein complement(5055745..5056227) Pseudonocardia dioxanivorans CB1190 10366564 YP_004334721.1 CDS Psed_4721 NC_015312.1 5056331 5057107 D KEGG: vcn:VOLCADRAFT_33984 hypothetical protein; hypothetical protein 5056331..5057107 Pseudonocardia dioxanivorans CB1190 10366565 YP_004334722.1 CDS Psed_4722 NC_015312.1 5057670 5058710 R KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA; hypothetical protein complement(5057670..5058710) Pseudonocardia dioxanivorans CB1190 10366566 YP_004334723.1 CDS Psed_4723 NC_015312.1 5058868 5059359 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tcu:Tcur_2193 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 5058868..5059359 Pseudonocardia dioxanivorans CB1190 10366567 YP_004334724.1 CDS Psed_4724 NC_015312.1 5059431 5060195 R PFAM: Methyltransferase type 11; KEGG: ami:Amir_5905 methyltransferase type 11; type 11 methyltransferase complement(5059431..5060195) Pseudonocardia dioxanivorans CB1190 10366568 YP_004334725.1 CDS Psed_4725 NC_015312.1 5060199 5061062 R PFAM: Phosphatidate cytidylyltransferase; KEGG: svi:Svir_09930 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase complement(5060199..5061062) Pseudonocardia dioxanivorans CB1190 10366569 YP_004334726.1 CDS Psed_4726 NC_015312.1 5061165 5061722 R TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: svi:Svir_09920 ribosome recycling factor; PFAM: Ribosome recycling factor; ribosome-recycling factor complement(5061165..5061722) Pseudonocardia dioxanivorans CB1190 10366570 YP_004334727.1 CDS Psed_4727 NC_015312.1 5061758 5062516 R KEGG: ami:Amir_5909 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase complement(5061758..5062516) Pseudonocardia dioxanivorans CB1190 10366571 YP_004334728.1 CDS Psed_4728 NC_015312.1 5062533 5063360 R TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Translation elongation factor EFTs/EF1B; KEGG: gbr:Gbro_2105 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; elongation factor Ts complement(5062533..5063360) Pseudonocardia dioxanivorans CB1190 10366572 YP_004334729.1 CDS Psed_4729 NC_015312.1 5063461 5064363 R KEGG: ami:Amir_5911 ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 complement(5063461..5064363) Pseudonocardia dioxanivorans CB1190 10366573 YP_004334730.1 CDS Psed_4730 NC_015312.1 5064743 5065480 D PFAM: Peptidase M23; KEGG: nfa:nfa41330 peptidase; peptidase M23 5064743..5065480 Pseudonocardia dioxanivorans CB1190 10366574 YP_004334731.1 CDS Psed_4731 NC_015312.1 5065488 5066777 R KEGG: svi:Svir_09870 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; RNA polymerase sigma 28 subunit FliA/WhiG complement(5065488..5066777) Pseudonocardia dioxanivorans CB1190 10366575 YP_004334732.1 CDS Psed_4732 NC_015312.1 5066752 5067684 R KEGG: mjl:Mjls_1970 site-specific tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC complement(5066752..5067684) Pseudonocardia dioxanivorans CB1190 10366576 YP_004334733.1 CDS Psed_4733 NC_015312.1 5067963 5069153 R KEGG: mtu:Rv2896c hypothetical protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA complement(5067963..5069153) Pseudonocardia dioxanivorans CB1190 10366577 YP_004334734.1 CDS Psed_4734 NC_015312.1 5069663 5071174 R TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: req:REQ_18110 magnesium chelatase; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI complement(5069663..5071174) Pseudonocardia dioxanivorans CB1190 10366578 YP_004334735.1 CDS Psed_4735 NC_015312.1 5071174 5071530 R TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: svi:Svir_09830 conserved hypothetical protein TIGR00252; PFAM: Uncharacterised protein family UPF0102; hypothetical protein complement(5071174..5071530) Pseudonocardia dioxanivorans CB1190 10366579 YP_004334736.1 CDS Psed_4736 NC_015312.1 5071695 5072018 R PFAM: Protein of unknown function DUF2469; KEGG: ami:Amir_5918 hypothetical protein; hypothetical protein complement(5071695..5072018) Pseudonocardia dioxanivorans CB1190 10366580 YP_004334737.1 CDS Psed_4737 NC_015312.1 5072015 5072812 R KEGG: ami:Amir_5919 ribonuclease H; PFAM: Ribonuclease HII/HIII; Ribonuclease H complement(5072015..5072812) Pseudonocardia dioxanivorans CB1190 10366581 YP_004334738.1 CDS Psed_4738 NC_015312.1 5072815 5074107 R TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: amd:AMED_5515 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(5072815..5074107) Pseudonocardia dioxanivorans CB1190 10366582 YP_004334739.1 CDS Psed_4739 NC_015312.1 5074445 5074804 R TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: sen:SACE_6049 50S ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 complement(5074445..5074804) Pseudonocardia dioxanivorans CB1190 10366583 YP_004334740.1 CDS Psed_4740 NC_015312.1 5074955 5075740 R PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: amd:AMED_1962 tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(5074955..5075740) Pseudonocardia dioxanivorans CB1190 10366584 YP_004334741.1 CDS Psed_4741 NC_015312.1 5075786 5076505 D PFAM: MgtC/SapB transporter; KEGG: sen:SACE_3790 Mg2+ transporter-C (MgtC) family protein; MgtC/SapB transporter 5075786..5076505 Pseudonocardia dioxanivorans CB1190 10366585 YP_004334742.1 CDS Psed_4742 NC_015312.1 5076519 5077088 R PFAM: Clp, N-terminal; KEGG: cai:Caci_7209 Clp domain protein; Clp domain-containing protein complement(5076519..5077088) Pseudonocardia dioxanivorans CB1190 10366586 YP_004334743.1 CDS Psed_4743 NC_015312.1 5077101 5077316 R KEGG: nfa:nfa51500 hypothetical protein; hypothetical protein complement(5077101..5077316) Pseudonocardia dioxanivorans CB1190 10366587 YP_004334744.1 CDS Psed_4744 NC_015312.1 5077443 5078093 R TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: svi:Svir_09770 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; ribosome maturation factor rimM complement(5077443..5078093) Pseudonocardia dioxanivorans CB1190 10366588 YP_004334745.1 CDS Psed_4745 NC_015312.1 5078050 5078289 R HAMAP: Uncharacterised protein family UPF0109, bacterial; KEGG: ami:Amir_5925 hypothetical protein; hypothetical protein complement(5078050..5078289) Pseudonocardia dioxanivorans CB1190 10366589 YP_004334746.1 CDS Psed_4746 NC_015312.1 5078286 5078729 R TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: amd:AMED_1958 small subunit ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 complement(5078286..5078729) Pseudonocardia dioxanivorans CB1190 10366590 YP_004334747.1 CDS Psed_4747 NC_015312.1 5078912 5080087 R PFAM: Abortive infection protein; KEGG: mbt:JTY_0677 integral membrane protein; abortive infection protein complement(5078912..5080087) Pseudonocardia dioxanivorans CB1190 10366591 YP_004334748.1 CDS Psed_4748 NC_015312.1 5080468 5081568 R PFAM: Amidohydrolase 1; KEGG: ami:Amir_5929 amidohydrolase; amidohydrolase complement(5080468..5081568) Pseudonocardia dioxanivorans CB1190 10366592 YP_004334749.1 CDS Psed_4749 NC_015312.1 5081565 5083094 R TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: svi:Svir_09710 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; signal recognition particle protein complement(5081565..5083094) Pseudonocardia dioxanivorans CB1190 10366593 YP_004334750.1 CDS Psed_4750 NC_015312.1 5083105 5083464 R hypothetical protein complement(5083105..5083464) Pseudonocardia dioxanivorans CB1190 10366594 YP_004334751.1 CDS Psed_4751 NC_015312.1 5083467 5083805 R KEGG: mmi:MMAR_1788 nitrogen regulatory protein P-II GlnB; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(5083467..5083805) Pseudonocardia dioxanivorans CB1190 10366595 YP_004334752.1 CDS Psed_4752 NC_015312.1 5083802 5086207 R SMART: Metal-dependent phosphohydrolase, HD domain; TIGRFAM: Protein-PII uridylyltransferase; KEGG: ami:Amir_5932 PII uridylyl-transferase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Amino acid-binding ACT; UTP-GlnB uridylyltransferase, GlnD complement(5083802..5086207) Pseudonocardia dioxanivorans CB1190 10366596 YP_004334753.1 CDS Psed_4753 NC_015312.1 5086245 5086628 R KEGG: mav:MAV_3774 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(5086245..5086628) Pseudonocardia dioxanivorans CB1190 10366597 YP_004334754.1 CDS Psed_4754 NC_015312.1 5086709 5087047 R KEGG: gbr:Gbro_2079 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(5086709..5087047) Pseudonocardia dioxanivorans CB1190 10366598 YP_004334755.1 CDS Psed_4755 NC_015312.1 5087050 5088426 R KEGG: rha:RHA1_ro06530 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter; ammonium transporter complement(5087050..5088426) Pseudonocardia dioxanivorans CB1190 10366599 YP_004334756.1 CDS Psed_4756 NC_015312.1 5088940 5090763 R TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: svi:Svir_09610 signal recognition particle-docking protein FtsY; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY complement(5088940..5090763) Pseudonocardia dioxanivorans CB1190 10366600 YP_004334757.1 CDS Psed_4757 NC_015312.1 5090793 5094353 R TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SMCs flexible hinge; KEGG: svi:Svir_09570 condensin subunit Smc; SMART: SMCs flexible hinge; chromosome segregation protein SMC complement(5090793..5094353) Pseudonocardia dioxanivorans CB1190 10366601 YP_004334758.1 CDS Psed_4758 NC_015312.1 5094396 5094686 R manually curated; HAMAP: Acylphosphatase; KEGG: sro:Sros_7993 acylphosphatase-like protein; PFAM: Acylphosphatase-like; acylphosphatase complement(5094396..5094686) Pseudonocardia dioxanivorans CB1190 10366602 YP_004334759.1 CDS Psed_4759 NC_015312.1 5094709 5095440 D KEGG: ami:Amir_5005 SCP-like extracellular; manually curated; PFAM: CAP domain; hypothetical protein 5094709..5095440 Pseudonocardia dioxanivorans CB1190 10366603 YP_004334760.1 CDS Psed_4760 NC_015312.1 5095489 5096187 R KEGG: ami:Amir_5960 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(5095489..5096187) Pseudonocardia dioxanivorans CB1190 10366604 YP_004334761.1 CDS Psed_4761 NC_015312.1 5096394 5097425 D KEGG: cmi:CMM_1697 Mg2+/Co2+ transporter; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 5096394..5097425 Pseudonocardia dioxanivorans CB1190 10366605 YP_004334762.1 CDS Psed_4762 NC_015312.1 5097436 5098332 R KEGG: amd:AMED_1798 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; SMART: DNA glycosylase/AP lyase, catalytic domain; formamidopyrimidine-DNA glycosylase complement(5097436..5098332) Pseudonocardia dioxanivorans CB1190 10366606 YP_004334763.1 CDS Psed_4763 NC_015312.1 5098343 5099059 R KEGG: ami:Amir_5964 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA-binding; ribonuclease 3 complement(5098343..5099059) Pseudonocardia dioxanivorans CB1190 10366607 YP_004334764.1 CDS Psed_4764 NC_015312.1 5099097 5099279 R TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: ami:Amir_5965 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 complement(5099097..5099279) Pseudonocardia dioxanivorans CB1190 10366608 YP_004334765.1 CDS Psed_4765 NC_015312.1 5099343 5099921 R PFAM: Protein of unknown function DUF177; KEGG: amd:AMED_1794 hypothetical protein; hypothetical protein complement(5099343..5099921) Pseudonocardia dioxanivorans CB1190 10366609 YP_004334766.1 CDS Psed_4766 NC_015312.1 5100002 5100766 R KEGG: sen:SACE_6104 large Ala/Glu-rich protein; large Ala/Glu-rich protein complement(5100002..5100766) Pseudonocardia dioxanivorans CB1190 10366610 YP_004334767.1 CDS Psed_4767 NC_015312.1 5100882 5101364 R PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: svi:Svir_09450 phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase complement(5100882..5101364) Pseudonocardia dioxanivorans CB1190 10366611 YP_004334768.1 CDS Psed_4768 NC_015312.1 5101387 5101950 R KEGG: amd:AMED_1788 methyltransferase; TIGRFAM: RNA methyltransferase, RsmD; PFAM: RNA methyltransferase, RsmD; methyltransferase complement(5101387..5101950) Pseudonocardia dioxanivorans CB1190 10366612 YP_004334769.1 CDS Psed_4769 NC_015312.1 5101958 5105335 R SMART: Biotin carboxylase, C-terminal; TIGRFAM: Pyruvate carboxylase; KEGG: sco:SCO0546 pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Carboxylase, conserved domain; Biotin/lipoyl attachment; pyruvate carboxylase complement(5101958..5105335) Pseudonocardia dioxanivorans CB1190 10366613 YP_004334770.1 CDS Psed_4770 NC_015312.1 5105704 5106510 D KEGG: gbr:Gbro_2781 hypothetical protein; hypothetical protein 5105704..5106510 Pseudonocardia dioxanivorans CB1190 10366614 YP_004334771.1 CDS Psed_4771 NC_015312.1 5106529 5108775 R TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; KEGG: sen:SACE_6119 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; ATP-dependent DNA helicase RecG complement(5106529..5108775) Pseudonocardia dioxanivorans CB1190 10366615 YP_004334772.1 CDS Psed_4772 NC_015312.1 5108813 5110471 R KEGG: ami:Amir_5978 Dak phosphatase; TIGRFAM: DAK2 domain-containing protein YloV; PFAM: Dak phosphatase; DAK2 domain fusion protein YloV complement(5108813..5110471) Pseudonocardia dioxanivorans CB1190 10366616 YP_004334773.1 CDS Psed_4773 NC_015312.1 5110611 5110802 D TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: nfa:nfa41960 50S ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 5110611..5110802 Pseudonocardia dioxanivorans CB1190 10366617 YP_004334774.1 CDS Psed_4774 NC_015312.1 5111011 5111691 R TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: tcu:Tcur_3819 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; uracil-DNA glycosylase complement(5111011..5111691) Pseudonocardia dioxanivorans CB1190 10366618 YP_004334775.1 CDS Psed_4775 NC_015312.1 5111691 5112215 R KEGG: srt:Srot_0993 transferase; transferase complement(5111691..5112215) Pseudonocardia dioxanivorans CB1190 10366619 YP_004334776.1 CDS Psed_4776 NC_015312.1 5112225 5112602 R KEGG: sen:SACE_6539 multisubunit Na+:H+ antiporter MnhG subunit; TIGRFAM: Na+/H+ antiporter subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG complement(5112225..5112602) Pseudonocardia dioxanivorans CB1190 10366620 YP_004334777.1 CDS Psed_4777 NC_015312.1 5112599 5112865 R KEGG: fre:Franean1_5210 hypothetical protein; hypothetical protein complement(5112599..5112865) Pseudonocardia dioxanivorans CB1190 10366621 YP_004334778.1 CDS Psed_4778 NC_015312.1 5112862 5113410 R KEGG: sen:SACE_6541 cation antiporter; cation antiporter complement(5112862..5113410) Pseudonocardia dioxanivorans CB1190 10366622 YP_004334779.1 CDS Psed_4779 NC_015312.1 5113484 5115010 R KEGG: sen:SACE_6542 monovalent cation/H+ antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) complement(5113484..5115010) Pseudonocardia dioxanivorans CB1190 10366623 YP_004334780.1 CDS Psed_4780 NC_015312.1 5115013 5115483 R PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; KEGG: svi:Svir_14760 multisubunit Na+/H+ antiporter, MnhC subunit; NADH-ubiquinone oxidoreductase subunit 4L complement(5115013..5115483) Pseudonocardia dioxanivorans CB1190 10366624 YP_004334781.1 CDS Psed_4782 NC_015312.1 5118634 5120835 R KEGG: dvm:DvMF_2183 malate synthase G; PFAM: Malate synthase; malate synthase complement(5118634..5120835) Pseudonocardia dioxanivorans CB1190 10366626 YP_004334782.1 CDS Psed_4783 NC_015312.1 5121105 5122559 D KEGG: svi:Svir_02320 FAD/FMN-dependent dehydrogenase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 5121105..5122559 Pseudonocardia dioxanivorans CB1190 10366627 YP_004334783.1 CDS Psed_4784 NC_015312.1 5122604 5123770 D PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: svi:Svir_02310 FAD/FMN-dependent dehydrogenase; FAD linked oxidase domain-containing protein 5122604..5123770 Pseudonocardia dioxanivorans CB1190 10366628 YP_004334784.1 CDS Psed_4785 NC_015312.1 5123767 5125146 D PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: svi:Svir_02300 Fe-S oxidoreductase; hypothetical protein 5123767..5125146 Pseudonocardia dioxanivorans CB1190 10366629 YP_004334785.1 CDS Psed_4786 NC_015312.1 5125348 5125959 D KEGG: rha:RHA1_ro06730 hypothetical protein; hypothetical protein 5125348..5125959 Pseudonocardia dioxanivorans CB1190 10366630 YP_004334786.1 CDS Psed_4787 NC_015312.1 5126001 5126699 D KEGG: sen:SACE_3778 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 5126001..5126699 Pseudonocardia dioxanivorans CB1190 10366631 YP_004334787.1 CDS Psed_4788 NC_015312.1 5126857 5128308 D KEGG: svi:Svir_02320 FAD/FMN-dependent dehydrogenase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 5126857..5128308 Pseudonocardia dioxanivorans CB1190 10366632 YP_004334788.1 CDS Psed_4789 NC_015312.1 5128312 5129490 D PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: svi:Svir_02310 FAD/FMN-dependent dehydrogenase; FAD linked oxidase domain-containing protein 5128312..5129490 Pseudonocardia dioxanivorans CB1190 10366633 YP_004334789.1 CDS Psed_4790 NC_015312.1 5129487 5130776 D PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: svi:Svir_02300 Fe-S oxidoreductase; hypothetical protein 5129487..5130776 Pseudonocardia dioxanivorans CB1190 10366634 YP_004334790.1 CDS Psed_4791 NC_015312.1 5130813 5131799 R TIGRFAM: Thiamine-monophosphate kinase; KEGG: ami:Amir_5985 thiamine-monophosphate kinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; thiamine-monophosphate kinase complement(5130813..5131799) Pseudonocardia dioxanivorans CB1190 10366635 YP_004334791.1 CDS Psed_4792 NC_015312.1 5131912 5132148 D PFAM: Transcription regulator AsnC-type, C-terminal; KEGG: nml:Namu_1487 AsnC family transcriptional regulator; AsnC family transcriptional regulator 5131912..5132148 Pseudonocardia dioxanivorans CB1190 10366636 YP_004334792.1 CDS Psed_4793 NC_015312.1 5132154 5132729 D KEGG: nfa:nfa42020 hypothetical protein; hypothetical protein 5132154..5132729 Pseudonocardia dioxanivorans CB1190 10366637 YP_004334793.1 CDS Psed_4794 NC_015312.1 5132747 5133844 R PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: req:REQ_31280 D-alanine-D-alanine ligase; D-alanine--D-alanine ligase complement(5132747..5133844) Pseudonocardia dioxanivorans CB1190 10366638 YP_004334794.1 CDS Psed_4795 NC_015312.1 5133862 5135778 R KEGG: bxe:Bxe_A2769 acetyl-CoA synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; acetate--CoA ligase complement(5133862..5135778) Pseudonocardia dioxanivorans CB1190 10366639 YP_004334795.1 CDS Psed_4796 NC_015312.1 5135796 5136935 R KEGG: bts:Btus_1727 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; isovaleryl-CoA dehydrogenase complement(5135796..5136935) Pseudonocardia dioxanivorans CB1190 10366640 YP_004334796.1 CDS Psed_4797 NC_015312.1 5137184 5137786 D PFAM: Isochorismatase-like; KEGG: gbr:Gbro_2858 isochorismatase hydrolase; isochorismatase hydrolase 5137184..5137786 Pseudonocardia dioxanivorans CB1190 10366641 YP_004334797.1 CDS Psed_4798 NC_015312.1 5137827 5138567 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: gob:Gobs_4542 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 5137827..5138567 Pseudonocardia dioxanivorans CB1190 10366642 YP_004334798.1 CDS Psed_4799 NC_015312.1 5138604 5140733 D KEGG: sen:SACE_1333 prolyl oligopeptidase; prolyl oligopeptidase 5138604..5140733 Pseudonocardia dioxanivorans CB1190 10366643 YP_004334799.1 CDS Psed_4800 NC_015312.1 5140730 5141758 D PFAM: Mechanosensitive ion channel MscS; KEGG: sen:SACE_1332 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 5140730..5141758 Pseudonocardia dioxanivorans CB1190 10366644 YP_004334800.1 CDS Psed_4801 NC_015312.1 5141820 5142200 D PFAM: Globin, truncated bacterial-like; KEGG: amd:AMED_6822 oxygen-binding heme protein; globin 5141820..5142200 Pseudonocardia dioxanivorans CB1190 10366645 YP_004334801.1 CDS Psed_4802 NC_015312.1 5142269 5143828 D KEGG: ami:Amir_1134 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; alpha amylase 5142269..5143828 Pseudonocardia dioxanivorans CB1190 10366646 YP_004334802.1 CDS Psed_4803 NC_015312.1 5143957 5144622 R KEGG: ami:Amir_1133 hypothetical protein; hypothetical protein complement(5143957..5144622) Pseudonocardia dioxanivorans CB1190 10366647 YP_004334803.1 CDS Psed_4804 NC_015312.1 5144696 5145115 R PFAM: Thioesterase superfamily; KEGG: sna:Snas_4640 thioesterase superfamily protein; thioesterase complement(5144696..5145115) Pseudonocardia dioxanivorans CB1190 10366648 YP_004334804.1 CDS Psed_4805 NC_015312.1 5145159 5150018 R PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: sen:SACE_1325 NAD-specific glutamate dehydrogenase; NAD-glutamate dehydrogenase complement(5145159..5150018) Pseudonocardia dioxanivorans CB1190 10366649 YP_004334805.1 CDS Psed_4806 NC_015312.1 5150091 5153828 R KEGG: tpr:Tpau_0881 hypothetical protein; hypothetical protein complement(5150091..5153828) Pseudonocardia dioxanivorans CB1190 10366650 YP_004334806.1 CDS Psed_4807 NC_015312.1 5153911 5155587 R TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter-like; KEGG: mav:MAV_1695 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; ChvD family ATP-binding cassette protein complement(5153911..5155587) Pseudonocardia dioxanivorans CB1190 10366651 YP_004334807.1 CDS Psed_4808 NC_015312.1 5155679 5156236 R KEGG: req:REQ_30370 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein complement(5155679..5156236) Pseudonocardia dioxanivorans CB1190 10366652 YP_004334808.1 CDS Psed_4809 NC_015312.1 5162309 5164489 R PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; Copper resistance D; KEGG: sen:SACE_1321 copper resistance transporter; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein complement(5162309..5164489) Pseudonocardia dioxanivorans CB1190 10366656 YP_004334809.1 CDS Psed_4810 NC_015312.1 5164524 5165348 R KEGG: sro:Sros_0115 phosphoprotein phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like; Ser/Thr phosphatase complement(5164524..5165348) Pseudonocardia dioxanivorans CB1190 10366657 YP_004334810.1 CDS Psed_4811 NC_015312.1 5165415 5167172 D PFAM: DNA methylase, adenine-specific; KEGG: sen:SACE_6614 type I restriction system adenine methylase; N-6 DNA methylase 5165415..5167172 Pseudonocardia dioxanivorans CB1190 10366658 YP_004334811.1 CDS Psed_4812 NC_015312.1 5167317 5168837 D KEGG: sna:Snas_6234 regulatory protein GntR HTH; PFAM: Integrase, catalytic core, phage; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; integrase protein 5167317..5168837 Pseudonocardia dioxanivorans CB1190 10366660 YP_004334812.1 CDS Psed_4813 NC_015312.1 5169107 5170699 D PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 5169107..5170699 Pseudonocardia dioxanivorans CB1190 10366661 YP_004334813.1 CDS Psed_4814 NC_015312.1 5170696 5171508 D KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 5170696..5171508 Pseudonocardia dioxanivorans CB1190 10366662 YP_004334814.1 CDS Psed_4815 NC_015312.1 5172449 5172736 R hypothetical protein complement(5172449..5172736) Pseudonocardia dioxanivorans CB1190 10366663 YP_004334815.1 CDS Psed_4816 NC_015312.1 5172958 5173911 D PFAM: ABC transporter-like; KEGG: cai:Caci_5722 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 5172958..5173911 Pseudonocardia dioxanivorans CB1190 10366664 YP_004334816.1 CDS Psed_4817 NC_015312.1 5173908 5174723 D KEGG: amd:AMED_6504 ABC transport system permease; ABC transporter permease 5173908..5174723 Pseudonocardia dioxanivorans CB1190 10366665 YP_004334817.1 CDS Psed_4818 NC_015312.1 5174922 5175737 D PFAM: Protein of unknown function DUF347; KEGG: cai:Caci_8898 protein of unknown function DUF347; hypothetical protein 5174922..5175737 Pseudonocardia dioxanivorans CB1190 10366666 YP_004334818.1 CDS Psed_4819 NC_015312.1 5175889 5176905 R KEGG: sen:SACE_4320 integral membrane protein; hypothetical protein complement(5175889..5176905) Pseudonocardia dioxanivorans CB1190 10366667 YP_004334819.1 CDS Psed_4820 NC_015312.1 5176905 5178083 R KEGG: nca:Noca_1551 hypothetical protein; hypothetical protein complement(5176905..5178083) Pseudonocardia dioxanivorans CB1190 10366668 YP_004334820.1 CDS Psed_4821 NC_015312.1 5178165 5178617 R PFAM: Protein of unknown function DUF1707; KEGG: fal:FRAAL2404 hypothetical protein; hypothetical protein complement(5178165..5178617) Pseudonocardia dioxanivorans CB1190 10366669 YP_004334821.1 CDS Psed_4822 NC_015312.1 5178639 5180051 R KEGG: sma:SAV_4158 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase complement(5178639..5180051) Pseudonocardia dioxanivorans CB1190 10366670 YP_004334822.1 CDS Psed_4823 NC_015312.1 5180048 5180773 R KEGG: tfu:Tfu_0343 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(5180048..5180773) Pseudonocardia dioxanivorans CB1190 10366671 YP_004334823.1 CDS Psed_4824 NC_015312.1 5180979 5181617 D PFAM: SNARE associated Golgi protein; KEGG: amd:AMED_6495 DedA-like membrane protein; hypothetical protein 5180979..5181617 Pseudonocardia dioxanivorans CB1190 10366672 YP_004334824.1 CDS Psed_4825 NC_015312.1 5182031 5183086 D KEGG: afo:Afer_0701 hypothetical protein; hypothetical protein 5182031..5183086 Pseudonocardia dioxanivorans CB1190 10366673 YP_004334825.1 CDS Psed_4826 NC_015312.1 5183083 5183874 D KEGG: nml:Namu_1164 PA-phosphatase-like phosphoesterase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 5183083..5183874 Pseudonocardia dioxanivorans CB1190 10366674 YP_004334826.1 CDS Psed_4827 NC_015312.1 5183871 5185208 D KEGG: tgr:Tgr7_2376 hypothetical protein; hypothetical protein 5183871..5185208 Pseudonocardia dioxanivorans CB1190 10366675 YP_004334827.1 CDS Psed_4828 NC_015312.1 5185321 5185446 R hypothetical protein complement(5185321..5185446) Pseudonocardia dioxanivorans CB1190 10366676 YP_004334828.1 CDS Psed_4829 NC_015312.1 5185609 5186940 R KEGG: gob:Gobs_0770 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase complement(5185609..5186940) Pseudonocardia dioxanivorans CB1190 10366677 YP_004334829.1 CDS Psed_4830 NC_015312.1 5186940 5187626 R KEGG: amd:AMED_6941 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(5186940..5187626) Pseudonocardia dioxanivorans CB1190 10366678 YP_004334830.1 CDS Psed_4831 NC_015312.1 5188186 5189538 R KEGG: fri:FraEuI1c_2985 Dyp-type peroxidase; TIGRFAM: Tat-translocated enzyme; Dyp-type peroxidase; PFAM: Dyp-type peroxidase; Tat-translocated protein complement(5188186..5189538) Pseudonocardia dioxanivorans CB1190 10366679 YP_004334831.1 CDS Psed_4832 NC_015312.1 5189535 5190704 R PFAM: Peptidase M75, Imelysin; KEGG: fri:FraEuI1c_2986 peptidase M75, imelysin; peptidase M75, Imelysin complement(5189535..5190704) Pseudonocardia dioxanivorans CB1190 10366680 YP_004334832.1 CDS Psed_4833 NC_015312.1 5190755 5191615 R PFAM: Iron permease FTR1; KEGG: fri:FraEuI1c_2987 iron permease FTR1; iron permease complement(5190755..5191615) Pseudonocardia dioxanivorans CB1190 10366681 YP_004334833.1 CDS Psed_4834 NC_015312.1 5191815 5192222 D PFAM: Penicillinase repressor; KEGG: fre:Franean1_7010 CopY family transcriptional regulator; penicillinase repressor 5191815..5192222 Pseudonocardia dioxanivorans CB1190 10366682 YP_004334834.1 CDS Psed_4835 NC_015312.1 5192219 5193130 D PFAM: Peptidase M48; KEGG: fri:FraEuI1c_2989 peptidase M48 Ste24p; peptidase M48 Ste24p 5192219..5193130 Pseudonocardia dioxanivorans CB1190 10366683 YP_004334835.1 CDS Psed_4836 NC_015312.1 5193099 5193707 R KEGG: mgi:Mflv_1496 hypothetical protein; hypothetical protein complement(5193099..5193707) Pseudonocardia dioxanivorans CB1190 10366684 YP_004334836.1 CDS Psed_4837 NC_015312.1 5194158 5194616 R KEGG: mmi:MMAR_1549 hypothetical protein; hypothetical protein complement(5194158..5194616) Pseudonocardia dioxanivorans CB1190 10366685 YP_004334837.1 CDS Psed_4838 NC_015312.1 5194688 5195743 R TIGRFAM: Acetate kinase; KEGG: fal:FRAAL5741 acetate kinase A (propionate kinase 2); PFAM: Acetate/butyrate kinase; acetate kinase complement(5194688..5195743) Pseudonocardia dioxanivorans CB1190 10366686 YP_004334838.1 CDS Psed_4839 NC_015312.1 5195787 5198141 R HAMAP: phosphoketolase; KEGG: mkm:Mkms_2837 phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal; phosphoketolase complement(5195787..5198141) Pseudonocardia dioxanivorans CB1190 10366687 YP_004334839.1 CDS Psed_4840 NC_015312.1 5198355 5199896 R KEGG: mau:Micau_2779 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Transport-associated; UspA; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein complement(5198355..5199896) Pseudonocardia dioxanivorans CB1190 10366688 YP_004334840.1 CDS Psed_4841 NC_015312.1 5199893 5200762 R PFAM: UspA; KEGG: sen:SACE_2455 universal stress protein; UspA domain-containing protein complement(5199893..5200762) Pseudonocardia dioxanivorans CB1190 10366689 YP_004334841.1 CDS Psed_4842 NC_015312.1 5201173 5202078 R PFAM: UspA; KEGG: mil:ML5_4708 UspA domain-containing protein; UspA domain-containing protein complement(5201173..5202078) Pseudonocardia dioxanivorans CB1190 10366690 YP_004334842.1 CDS Psed_4843 NC_015312.1 5202075 5202959 R PFAM: UspA; KEGG: mil:ML5_4708 UspA domain-containing protein; UspA domain-containing protein complement(5202075..5202959) Pseudonocardia dioxanivorans CB1190 10366691 YP_004334843.1 CDS Psed_4844 NC_015312.1 5203193 5204209 D SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: scb:SCAB_10521 oxidoreductase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 5203193..5204209 Pseudonocardia dioxanivorans CB1190 10366692 YP_004334844.1 CDS Psed_4845 NC_015312.1 5204206 5205684 D KEGG: sro:Sros_4837 gluconate kinase; gluconate kinase 5204206..5205684 Pseudonocardia dioxanivorans CB1190 10366693 YP_004334845.1 CDS Psed_4847 NC_015312.1 5205978 5206391 R KEGG: nml:Namu_2400 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein complement(5205978..5206391) Pseudonocardia dioxanivorans CB1190 10366695 YP_004334846.1 CDS Psed_4848 NC_015312.1 5206634 5206834 D hypothetical protein 5206634..5206834 Pseudonocardia dioxanivorans CB1190 10366696 YP_004334847.1 CDS Psed_4849 NC_015312.1 5207481 5209913 D TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mjl:Mjls_1106 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; Haemerythrin/HHE cation-binding motif; heavy metal translocating P-type ATPase 5207481..5209913 Pseudonocardia dioxanivorans CB1190 10366697 YP_004334848.1 CDS Psed_4850 NC_015312.1 5210313 5210642 D hypothetical protein 5210313..5210642 Pseudonocardia dioxanivorans CB1190 10366698 YP_004334849.1 CDS Psed_4851 NC_015312.1 5210639 5211940 D KEGG: kra:Krad_0433 PAS/PAC sensor protein; PFAM: PAS fold-4; SMART: PAS; PAS fold-4 domain-containing protein 5210639..5211940 Pseudonocardia dioxanivorans CB1190 10366699 YP_004334850.1 CDS Psed_4852 NC_015312.1 5212565 5212942 D KEGG: xce:Xcel_1117 hypothetical protein; hypothetical protein 5212565..5212942 Pseudonocardia dioxanivorans CB1190 10366700 YP_004334851.1 CDS Psed_4853 NC_015312.1 5213097 5214281 R PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit complement(5213097..5214281) Pseudonocardia dioxanivorans CB1190 10366701 YP_004334852.1 CDS Psed_4855 NC_015312.1 5214732 5215820 D PFAM: Integrase, catalytic core, phage; KEGG: msp:Mspyr1_54040 site-specific recombinase XerD; integrase protein 5214732..5215820 Pseudonocardia dioxanivorans CB1190 10366703 YP_004334853.1 CDS Psed_4856 NC_015312.1 5215817 5216134 D KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator 5215817..5216134 Pseudonocardia dioxanivorans CB1190 10366704 YP_004334854.1 CDS Psed_4857 NC_015312.1 5216201 5217847 D KEGG: rer:pREL1_0202 hypothetical protein; manually curated; PFAM: Integrase, N-terminal SAM-like, phage; integrase domain-containing protein SAM domain-containing protein 5216201..5217847 Pseudonocardia dioxanivorans CB1190 10366705 YP_004334855.1 CDS Psed_4858 NC_015312.1 5217744 5218493 R KEGG: rer:pREL1_0203 transposition helper protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(5217744..5218493) Pseudonocardia dioxanivorans CB1190 10366706 YP_004334856.1 CDS Psed_4859 NC_015312.1 5218565 5219677 R PFAM: Integrase, catalytic core; KEGG: tpr:Tpau_1024 integrase catalytic region; integrase catalytic subunit complement(5218565..5219677) Pseudonocardia dioxanivorans CB1190 10366707 YP_004334857.1 CDS Psed_4860 NC_015312.1 5220006 5220206 R hypothetical protein complement(5220006..5220206) Pseudonocardia dioxanivorans CB1190 10366708 YP_004334858.1 CDS Psed_4861 NC_015312.1 5220761 5221759 D PFAM: Cell shape determining protein MreB/Mrl; KEGG: rop:ROP_03780 rod shape-determining protein MreB; cell shape determining protein MreB/Mrl 5220761..5221759 Pseudonocardia dioxanivorans CB1190 10366709 YP_004334859.1 CDS Psed_4862 NC_015312.1 5221807 5223429 D KEGG: fri:FraEuI1c_6395 hypothetical protein; hypothetical protein 5221807..5223429 Pseudonocardia dioxanivorans CB1190 10366710 YP_004334860.1 CDS Psed_4863 NC_015312.1 5223488 5224342 R KEGG: fri:FraEuI1c_3801 hypothetical protein; hypothetical protein complement(5223488..5224342) Pseudonocardia dioxanivorans CB1190 10366711 YP_004334861.1 CDS Psed_4864 NC_015312.1 5224392 5225126 D PFAM: Polysaccharide deacetylase; KEGG: fri:FraEuI1c_3800 polysaccharide deacetylase; polysaccharide deacetylase 5224392..5225126 Pseudonocardia dioxanivorans CB1190 10366712 YP_004334862.1 CDS Psed_4865 NC_015312.1 5224962 5226248 R PFAM: Monogalactosyldiacylglycerol synthase; KEGG: saq:Sare_0629 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like protein; monogalactosyldiacylglycerol synthase complement(5224962..5226248) Pseudonocardia dioxanivorans CB1190 10366713 YP_004334863.1 CDS Psed_4866 NC_015312.1 5226264 5227727 R KEGG: sro:Sros_5318 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SNARE associated Golgi protein; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein complement(5226264..5227727) Pseudonocardia dioxanivorans CB1190 10366714 YP_004334864.1 CDS Psed_4867 NC_015312.1 5227750 5228655 R KEGG: nca:Noca_1553 undecaprenyl-diphosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein complement(5227750..5228655) Pseudonocardia dioxanivorans CB1190 10366715 YP_004334865.1 CDS Psed_4868 NC_015312.1 5228706 5229236 D PFAM: Penicillinase repressor; KEGG: sco:SCO6358 hypothetical protein; CopY family transcriptional regulator 5228706..5229236 Pseudonocardia dioxanivorans CB1190 10366716 YP_004334866.1 CDS Psed_4869 NC_015312.1 5229251 5230390 D PFAM: Peptidase M48; KEGG: cai:Caci_9019 peptidase M48 Ste24p; peptidase M48 Ste24p 5229251..5230390 Pseudonocardia dioxanivorans CB1190 10366717 YP_004334867.1 CDS Psed_4870 NC_015312.1 5230471 5233383 R PFAM: Penicillin-binding protein, transpeptidase; Cell cycle protein; Penicillin-binding protein, dimerisation domain; KEGG: req:REQ_10960 peptidoglycan synthesis protein; penicillin-binding protein transpeptidase complement(5230471..5233383) Pseudonocardia dioxanivorans CB1190 10366718 YP_004334868.1 CDS Psed_4871 NC_015312.1 5233406 5233948 R KEGG: req:REQ_10950 membrane protein; hypothetical protein complement(5233406..5233948) Pseudonocardia dioxanivorans CB1190 10366719 YP_004334869.1 CDS Psed_4872 NC_015312.1 5233945 5234355 R KEGG: cma:Cmaq_1259 fructose-bisphosphate aldolase; hypothetical protein complement(5233945..5234355) Pseudonocardia dioxanivorans CB1190 10366720 YP_004334870.1 CDS Psed_4873 NC_015312.1 5234740 5235003 D PFAM: Protein of unknown function DUF1876; KEGG: sen:SACE_2426 hypothetical protein; hypothetical protein 5234740..5235003 Pseudonocardia dioxanivorans CB1190 10366721 YP_004334871.1 CDS Psed_4874 NC_015312.1 5235062 5235424 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:gll0133 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 5235062..5235424 Pseudonocardia dioxanivorans CB1190 10366722 YP_004334872.1 CDS Psed_4875 NC_015312.1 5235551 5236285 R PFAM: Domain of unknown function DUF125, transmembrane; KEGG: rha:RHA1_ro04892 hypothetical protein; hypothetical protein complement(5235551..5236285) Pseudonocardia dioxanivorans CB1190 10366723 YP_004334873.1 CDS Psed_4876 NC_015312.1 5236440 5236856 R KEGG: kfl:Kfla_3387 hypothetical protein; hypothetical protein complement(5236440..5236856) Pseudonocardia dioxanivorans CB1190 10366724 YP_004334874.1 CDS Psed_4877 NC_015312.1 5236973 5237266 R hypothetical protein complement(5236973..5237266) Pseudonocardia dioxanivorans CB1190 10366725 YP_004334875.1 CDS Psed_4878 NC_015312.1 5237405 5238331 R KEGG: rha:RHA1_ro10169 acylamide amidohydrolase; hypothetical protein complement(5237405..5238331) Pseudonocardia dioxanivorans CB1190 10366726 YP_004334876.1 CDS Psed_4879 NC_015312.1 5238692 5239171 D KEGG: scb:SCAB_84441 MarR family regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 5238692..5239171 Pseudonocardia dioxanivorans CB1190 10366727 YP_004334877.1 CDS Psed_4881 NC_015312.1 5240653 5242677 D KEGG: sen:SACE_0923 hypothetical protein; hypothetical protein 5240653..5242677 Pseudonocardia dioxanivorans CB1190 10366729 YP_004334878.1 CDS Psed_4882 NC_015312.1 5242828 5243487 D KEGG: fra:Francci3_2241 hypothetical protein; hypothetical protein 5242828..5243487 Pseudonocardia dioxanivorans CB1190 10366730 YP_004334879.1 CDS Psed_4883 NC_015312.1 5243575 5243859 D TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB, KEGG: krh:KRH_22990 regulatory protein; SMART: Regulatory protein, FmdB; FmdB family regulatory protein 5243575..5243859 Pseudonocardia dioxanivorans CB1190 10366731 YP_004334880.1 CDS Psed_4884 NC_015312.1 5243886 5245133 D KEGG: sen:SACE_1932 formamidase; PFAM: Acetamidase/Formamidase; formamidase 5243886..5245133 Pseudonocardia dioxanivorans CB1190 10366732 YP_004334881.1 CDS Psed_4885 NC_015312.1 5245208 5246311 D PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 5245208..5246311 Pseudonocardia dioxanivorans CB1190 10366733 YP_004334882.1 CDS Psed_4886 NC_015312.1 5246466 5247143 D KEGG: nml:Namu_0765 LuxR family two component transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5246466..5247143 Pseudonocardia dioxanivorans CB1190 10366734 YP_004334883.1 CDS Psed_4887 NC_015312.1 5247202 5247540 R hypothetical protein complement(5247202..5247540) Pseudonocardia dioxanivorans CB1190 10366735 YP_004334884.1 CDS Psed_4888 NC_015312.1 5247615 5248457 R PFAM: FhuF/siderophore biosynthesis protein; KEGG: req:REQ_32280 protein; FhuF/siderophore biosynthesis protein complement(5247615..5248457) Pseudonocardia dioxanivorans CB1190 10366736 YP_004334885.1 CDS Psed_4889 NC_015312.1 5248454 5248585 R hypothetical protein complement(5248454..5248585) Pseudonocardia dioxanivorans CB1190 10366737 YP_004334886.1 CDS Psed_4890 NC_015312.1 5248592 5248891 R KEGG: rha:RHA1_ro10171 hypothetical protein; hypothetical protein complement(5248592..5248891) Pseudonocardia dioxanivorans CB1190 10366738 YP_004334887.1 CDS Psed_4891 NC_015312.1 5248897 5249406 R hypothetical protein complement(5248897..5249406) Pseudonocardia dioxanivorans CB1190 10366739 YP_004334888.1 CDS Psed_4892 NC_015312.1 5249680 5251335 R KEGG: rha:RHA1_ro10172 hypothetical protein; hypothetical protein complement(5249680..5251335) Pseudonocardia dioxanivorans CB1190 10366740 YP_004334889.1 CDS Psed_4893 NC_015312.1 5251431 5251730 R KEGG: rha:RHA1_ro10171 hypothetical protein; hypothetical protein complement(5251431..5251730) Pseudonocardia dioxanivorans CB1190 10366741 YP_004334890.1 CDS Psed_4894 NC_015312.1 5251745 5253208 R KEGG: rha:RHA1_ro10170 hypothetical protein; hypothetical protein complement(5251745..5253208) Pseudonocardia dioxanivorans CB1190 10366742 YP_004334891.1 CDS Psed_4895 NC_015312.1 5253251 5254036 D hypothetical protein 5253251..5254036 Pseudonocardia dioxanivorans CB1190 10366743 YP_004334892.1 CDS Psed_4896 NC_015312.1 5253897 5255486 R KEGG: cai:Caci_3304 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, YjcE-like, bacteria; PFAM: Cation/H+ exchanger; Na+/H+ antiporter complement(5253897..5255486) Pseudonocardia dioxanivorans CB1190 10366744 YP_004334893.1 CDS Psed_4897 NC_015312.1 5255599 5256063 R KEGG: aai:AARI_22160 hypothetical protein; hypothetical protein complement(5255599..5256063) Pseudonocardia dioxanivorans CB1190 10366745 YP_004334894.1 CDS Psed_4899 NC_015312.1 5256761 5257039 R KEGG: svi:Svir_15360 hypothetical protein; hypothetical protein complement(5256761..5257039) Pseudonocardia dioxanivorans CB1190 10366747 YP_004334895.1 CDS Psed_4900 NC_015312.1 5257175 5258392 R PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_4862 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein complement(5257175..5258392) Pseudonocardia dioxanivorans CB1190 10366748 YP_004334896.1 CDS Psed_4901 NC_015312.1 5258508 5259377 R PFAM: Rhodanese-like; KEGG: cfl:Cfla_0454 rhodanese domain protein; SMART: Rhodanese-like; 3-mercaptopyruvate sulfurtransferase complement(5258508..5259377) Pseudonocardia dioxanivorans CB1190 10366749 YP_004334897.1 CDS Psed_4902 NC_015312.1 5259567 5260526 D KEGG: scb:SCAB_86601 esterase LipW; esterase 5259567..5260526 Pseudonocardia dioxanivorans CB1190 10366750 YP_004334898.1 CDS Psed_4903 NC_015312.1 5260543 5261520 D KEGG: nml:Namu_5170 transcriptional regulator CdaR; transcriptional regulator CdaR 5260543..5261520 Pseudonocardia dioxanivorans CB1190 10366751 YP_004334899.1 CDS Psed_4904 NC_015312.1 5261599 5262429 D manually curated; PFAM: Beta-lactamase-like; KEGG: sro:Sros_3006 metal-dependent hydrolase; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 5261599..5262429 Pseudonocardia dioxanivorans CB1190 10366752 YP_004334900.1 CDS Psed_4905 NC_015312.1 5262422 5263456 R PFAM: Crotonase, core; KEGG: amd:AMED_7205 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase complement(5262422..5263456) Pseudonocardia dioxanivorans CB1190 10366753 YP_004334901.1 CDS Psed_4906 NC_015312.1 5263483 5264646 D KEGG: rop:ROP_70910 hypothetical protein; hypothetical protein 5263483..5264646 Pseudonocardia dioxanivorans CB1190 10366754 YP_004334902.1 CDS Psed_4907 NC_015312.1 5264634 5265965 D PFAM: Amidohydrolase 3; KEGG: rop:ROP_70920 hypothetical protein; amidohydrolase 5264634..5265965 Pseudonocardia dioxanivorans CB1190 10366755 YP_004334903.1 CDS Psed_4908 NC_015312.1 5265980 5267470 R KEGG: fal:FRAAL1950 O-succinylbenzoate--CoA ligase (OSB-CoA synthetase) (O-succinylbenzoyl-CoA synthetase); PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(5265980..5267470) Pseudonocardia dioxanivorans CB1190 10366756 YP_004334904.1 CDS Psed_4909 NC_015312.1 5267569 5267883 D KEGG: rop:ROP_71030 hypothetical protein; hypothetical protein 5267569..5267883 Pseudonocardia dioxanivorans CB1190 10366757 YP_004334905.1 CDS Psed_4910 NC_015312.1 5267950 5270070 R PFAM: Alpha/beta hydrolase fold-1; Glycosyl transferase, family 28, C-terminal; KEGG: bcv:Bcav_2695 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(5267950..5270070) Pseudonocardia dioxanivorans CB1190 10366758 YP_004334906.1 CDS Psed_4911 NC_015312.1 5270071 5271150 R PFAM: Methyltransferase type 12; KEGG: bcv:Bcav_2696 methyltransferase type 12; type 12 methyltransferase complement(5270071..5271150) Pseudonocardia dioxanivorans CB1190 10366759 YP_004334907.1 CDS Psed_4912 NC_015312.1 5271252 5274005 D KEGG: mva:Mvan_3871 regulatory protein, LuxR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5271252..5274005 Pseudonocardia dioxanivorans CB1190 10366760 YP_004334908.1 CDS Psed_4913 NC_015312.1 5274026 5274793 R KEGG: cwo:Cwoe_4409 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(5274026..5274793) Pseudonocardia dioxanivorans CB1190 10366761 YP_004334909.1 CDS Psed_4914 NC_015312.1 5274988 5275668 D PFAM: Glutamine amidotransferase, class-II; KEGG: fal:FRAAL1888 glutamine amidotransferase; glutamine amidotransferase 5274988..5275668 Pseudonocardia dioxanivorans CB1190 10366762 YP_004334910.1 CDS Psed_4915 NC_015312.1 5275656 5276360 D PFAM: Glutamate synthase, alpha subunit, C-terminal; KEGG: fri:FraEuI1c_5163 glutamate synthase alpha subunit domain protein; glutamate synthase subunit alpha domain-containing protein 5275656..5276360 Pseudonocardia dioxanivorans CB1190 10366763 YP_004334911.1 CDS Psed_4916 NC_015312.1 5276376 5277698 D KEGG: msm:MSMEG_6263 glutamate synthase protein; PFAM: Glutamate synthase, central-C; glutamate synthase 5276376..5277698 Pseudonocardia dioxanivorans CB1190 10366764 YP_004334912.1 CDS Psed_4917 NC_015312.1 5277807 5279162 D TIGRFAM: Glutamine synthetase, type III; KEGG: msm:MSMEG_6260 glutamine synthetase, type III; PFAM: Glutamine synthetase, catalytic domain; glutamine synthetase I 5277807..5279162 Pseudonocardia dioxanivorans CB1190 10366765 YP_004334913.1 CDS Psed_4918 NC_015312.1 5279204 5280502 D PFAM: FAD dependent oxidoreductase; KEGG: mei:Msip34_2428 FAD dependent oxidoreductase; FAD dependent oxidoreductase 5279204..5280502 Pseudonocardia dioxanivorans CB1190 10366766 YP_004334914.1 CDS Psed_4919 NC_015312.1 5280549 5280800 D PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: sen:SACE_4493 sarcosine oxidase, delta chain; sarcosine oxidase subunit delta 5280549..5280800 Pseudonocardia dioxanivorans CB1190 10366767 YP_004334915.1 CDS Psed_4920 NC_015312.1 5280797 5283667 D KEGG: bvi:Bcep1808_7300 sarcosine oxidase alpha subunit family protein; PFAM: Glycine cleavage T-protein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Glycine cleavage T-protein, C-terminal barrel; sarcosine oxidase 5280797..5283667 Pseudonocardia dioxanivorans CB1190 10366768 YP_004334916.1 CDS Psed_4921 NC_015312.1 5283660 5284358 D PFAM: Sarcosine oxidase, gamma subunit; KEGG: sen:SACE_4491 sarcosine oxidase gamma subunit; sarcosine oxidase subunit gamma 5283660..5284358 Pseudonocardia dioxanivorans CB1190 10366769 YP_004334917.1 CDS Psed_4922 NC_015312.1 5284429 5285358 D TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: mbt:JTY_2980 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase 5284429..5285358 Pseudonocardia dioxanivorans CB1190 10366770 YP_004334918.1 CDS Psed_4923 NC_015312.1 5285369 5286226 D HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: cwo:Cwoe_3588 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD 5285369..5286226 Pseudonocardia dioxanivorans CB1190 10366771 YP_004334919.1 CDS Psed_4924 NC_015312.1 5286241 5287452 R TIGRFAM: Thiolase; KEGG: amd:AMED_4613 acetyl-CoA acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase complement(5286241..5287452) Pseudonocardia dioxanivorans CB1190 10366772 YP_004334920.1 CDS Psed_4925 NC_015312.1 5288040 5289215 D KEGG: fal:FRAAL4450 monomeric sarcosine oxidase (MSOX); PFAM: FAD dependent oxidoreductase; sarcosine oxidase 5288040..5289215 Pseudonocardia dioxanivorans CB1190 10366773 YP_004334921.1 CDS Psed_4926 NC_015312.1 5289307 5290311 D KEGG: rop:ROP_19400 oxygenase; oxygenase 5289307..5290311 Pseudonocardia dioxanivorans CB1190 10366774 YP_004334922.1 CDS Psed_4927 NC_015312.1 5290308 5290400 D hypothetical protein 5290308..5290400 Pseudonocardia dioxanivorans CB1190 10366775 YP_004334923.1 CDS Psed_4928 NC_015312.1 5290397 5291770 D TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: rha:RHA1_ro02225 nitrilotriacetate monoxygenase, component A; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 5290397..5291770 Pseudonocardia dioxanivorans CB1190 10366776 YP_004334924.1 CDS Psed_4929 NC_015312.1 5291936 5292946 D KEGG: sma:SAV_7208 ABC transporter permease; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 5291936..5292946 Pseudonocardia dioxanivorans CB1190 10366777 YP_004334925.1 CDS Psed_4930 NC_015312.1 5292943 5293779 D PFAM: ABC transporter-like; KEGG: sma:SAV_7209 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 5292943..5293779 Pseudonocardia dioxanivorans CB1190 10366778 YP_004334926.1 CDS Psed_4931 NC_015312.1 5293804 5294907 D KEGG: sma:SAV_7210 ABC transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein 5293804..5294907 Pseudonocardia dioxanivorans CB1190 10366779 YP_004334927.1 CDS Psed_4932 NC_015312.1 5294959 5295687 D PFAM: FR47-like; KEGG: fri:FraEuI1c_3113 FR47 domain protein; FR47 domain-containing protein 5294959..5295687 Pseudonocardia dioxanivorans CB1190 10366780 YP_004334928.1 CDS Psed_4933 NC_015312.1 5295736 5296548 R PFAM: Protein of unknown function DUF1684; KEGG: rop:ROP_19320 hypothetical protein; hypothetical protein complement(5295736..5296548) Pseudonocardia dioxanivorans CB1190 10366781 YP_004334929.1 CDS Psed_4935 NC_015312.1 5296957 5298216 R KEGG: tbi:Tbis_1595 luciferase-like monooxygenase; TIGRFAM: Luciferase oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase oxidoreductase, group 1 complement(5296957..5298216) Pseudonocardia dioxanivorans CB1190 10366783 YP_004334930.1 CDS Psed_4936 NC_015312.1 5298213 5299889 R PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fri:FraEuI1c_3109 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphate-transporting ATPase complement(5298213..5299889) Pseudonocardia dioxanivorans CB1190 10366784 YP_004334931.1 CDS Psed_4937 NC_015312.1 5300054 5300152 R hypothetical protein complement(5300054..5300152) Pseudonocardia dioxanivorans CB1190 10366785 YP_004334932.1 CDS Psed_4938 NC_015312.1 5300354 5300818 R KEGG: sma:SAV_3609 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(5300354..5300818) Pseudonocardia dioxanivorans CB1190 10366786 YP_004334933.1 CDS Psed_4939 NC_015312.1 5300934 5301887 D KEGG: scb:SCAB_20541 lipase; lipase 5300934..5301887 Pseudonocardia dioxanivorans CB1190 10366787 YP_004334934.1 CDS Psed_4940 NC_015312.1 5301989 5302927 R PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: bbt:BBta_2632 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(5301989..5302927) Pseudonocardia dioxanivorans CB1190 10366788 YP_004334935.1 CDS Psed_4941 NC_015312.1 5302924 5304147 R KEGG: bbt:BBta_2631 formyl-coenzyme A transferase, L-carnitine dehydratase; PFAM: CoA-transferase III; formyl-CoA transferase complement(5302924..5304147) Pseudonocardia dioxanivorans CB1190 10366789 YP_004334936.1 CDS Psed_4942 NC_015312.1 5304155 5305012 R PFAM: Crotonase, core; KEGG: bge:BC1002_4061 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase complement(5304155..5305012) Pseudonocardia dioxanivorans CB1190 10366790 YP_004334937.1 CDS Psed_4943 NC_015312.1 5305104 5305748 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_3360 transcriptional regulator; TetR family transcriptional regulator 5305104..5305748 Pseudonocardia dioxanivorans CB1190 10366791 YP_004334938.1 CDS Psed_4944 NC_015312.1 5305850 5308312 R PFAM: Major facilitator superfamily MFS-1; Collagen-binding surface protein Cna-like, B-type domain; KEGG: cai:Caci_4425 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein complement(5305850..5308312) Pseudonocardia dioxanivorans CB1190 10366792 YP_004334939.1 CDS Psed_4945 NC_015312.1 5308486 5309046 D PFAM: Helix-turn-helix, HxlR type; KEGG: msm:MSMEG_3013 transcriptional regulator family protein; HxlR family transcriptional regulator 5308486..5309046 Pseudonocardia dioxanivorans CB1190 10366793 YP_004334940.1 CDS Psed_4946 NC_015312.1 5309467 5309937 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fri:FraEuI1c_1863 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5309467..5309937 Pseudonocardia dioxanivorans CB1190 10366794 YP_004334941.1 CDS Psed_4947 NC_015312.1 5309934 5310284 D KEGG: ccs:CCNA_01339 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 5309934..5310284 Pseudonocardia dioxanivorans CB1190 10366795 YP_004334942.1 CDS Psed_4948 NC_015312.1 5310281 5310745 D PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: fri:FraEuI1c_1865 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 5310281..5310745 Pseudonocardia dioxanivorans CB1190 10366796 YP_004334943.1 CDS Psed_4949 NC_015312.1 5310930 5311778 D KEGG: kfl:Kfla_4633 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain; Hydroxypyruvate isomerase 5310930..5311778 Pseudonocardia dioxanivorans CB1190 10366797 YP_004334944.1 CDS Psed_4950 NC_015312.1 5311981 5312241 D hypothetical protein 5311981..5312241 Pseudonocardia dioxanivorans CB1190 10366798 YP_004334945.1 CDS Psed_4951 NC_015312.1 5312238 5312525 D hypothetical protein 5312238..5312525 Pseudonocardia dioxanivorans CB1190 10366799 YP_004334946.1 CDS Psed_4952 NC_015312.1 5312483 5315272 R KEGG: nml:Namu_2934 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; 4Fe-4S binding domain; Cysteine-rich domain; D-lactate dehydrogenase complement(5312483..5315272) Pseudonocardia dioxanivorans CB1190 10366800 YP_004334947.1 CDS Psed_4954 NC_015312.1 5315684 5315818 D hypothetical protein 5315684..5315818 Pseudonocardia dioxanivorans CB1190 10366802 YP_004334948.1 CDS Psed_4956 NC_015312.1 5316133 5316354 D hypothetical protein 5316133..5316354 Pseudonocardia dioxanivorans CB1190 10366804 YP_004334949.1 CDS Psed_4958 NC_015312.1 5317492 5317755 R hypothetical protein complement(5317492..5317755) Pseudonocardia dioxanivorans CB1190 10366806 YP_004334950.1 CDS Psed_4959 NC_015312.1 5318028 5319224 D PFAM: Lipase, secreted; KEGG: nml:Namu_3126 secretory lipase; secretory lipase 5318028..5319224 Pseudonocardia dioxanivorans CB1190 10366807 YP_004334951.1 CDS Psed_4960 NC_015312.1 5319319 5320284 D KEGG: nml:Namu_5169 alpha/beta hydrolase fold-3 domain-containing protein; alpha/beta hydrolase 5319319..5320284 Pseudonocardia dioxanivorans CB1190 10366808 YP_004334952.1 CDS Psed_4961 NC_015312.1 5320342 5321364 D KEGG: scb:SCAB_0611 hypothetical protein; hypothetical protein 5320342..5321364 Pseudonocardia dioxanivorans CB1190 10366809 YP_004334953.1 CDS Psed_4962 NC_015312.1 5321404 5321907 D KEGG: cwo:Cwoe_1186 hypothetical protein; hypothetical protein 5321404..5321907 Pseudonocardia dioxanivorans CB1190 10366810 YP_004334954.1 CDS Psed_4963 NC_015312.1 5321904 5322758 D KEGG: amd:AMED_2049 hypothetical protein; hypothetical protein 5321904..5322758 Pseudonocardia dioxanivorans CB1190 10366811 YP_004334955.1 CDS Psed_4964 NC_015312.1 5322809 5323780 D SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: sma:SAV_5961 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; daunorubicin resistance ABC transporter ATPase subunit 5322809..5323780 Pseudonocardia dioxanivorans CB1190 10366812 YP_004334956.1 CDS Psed_4965 NC_015312.1 5323777 5324595 D PFAM: ABC-2 type transporter; KEGG: rha:RHA1_ro02603 multidrug ABC transporter permease; ABC transporter 5323777..5324595 Pseudonocardia dioxanivorans CB1190 10366813 YP_004334957.1 CDS Psed_4966 NC_015312.1 5324626 5324922 D KEGG: kfl:Kfla_0016 hypothetical protein; hypothetical protein 5324626..5324922 Pseudonocardia dioxanivorans CB1190 10366814 YP_004334958.1 CDS Psed_4967 NC_015312.1 5324868 5325647 R KEGG: nml:Namu_5035 osmosensitive K+ channel histidine kinase-like protein; osmosensitive K+ channel histidine kinase-like protein complement(5324868..5325647) Pseudonocardia dioxanivorans CB1190 10366815 YP_004334959.1 CDS Psed_4968 NC_015312.1 5325717 5326943 R KEGG: rop:ROP_49960 CaiB/BaiF family protein; PFAM: CoA-transferase III; formyl-CoA transferase complement(5325717..5326943) Pseudonocardia dioxanivorans CB1190 10366816 YP_004334960.1 CDS Psed_4969 NC_015312.1 5327008 5327871 R KEGG: amd:AMED_4854 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase complement(5327008..5327871) Pseudonocardia dioxanivorans CB1190 10366817 YP_004334961.1 CDS Psed_4970 NC_015312.1 5327979 5328812 R PFAM: Methyltransferase type 11; KEGG: fal:FRAAL5015 methyltransferase; type 11 methyltransferase complement(5327979..5328812) Pseudonocardia dioxanivorans CB1190 10366818 YP_004334962.1 CDS Psed_4971 NC_015312.1 5328836 5329372 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_1865 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(5328836..5329372) Pseudonocardia dioxanivorans CB1190 10366819 YP_004334963.1 CDS Psed_4972 NC_015312.1 5329369 5329608 R PFAM: Biotin/lipoyl attachment; KEGG: sjp:SJA_C1-18650 acyltransferase; biotin/lipoyl attachment domain-containing protein complement(5329369..5329608) Pseudonocardia dioxanivorans CB1190 10366820 YP_004334964.1 CDS Psed_4973 NC_015312.1 5329605 5330585 R PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: sjp:SJA_C1-18660 pyruvate dehydrogenase E1 component beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase complement(5329605..5330585) Pseudonocardia dioxanivorans CB1190 10366821 YP_004334965.1 CDS Psed_4974 NC_015312.1 5330597 5331610 R KEGG: rxy:Rxyl_3050 pyruvate dehydrogenase; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase complement(5330597..5331610) Pseudonocardia dioxanivorans CB1190 10366822 YP_004334966.1 CDS Psed_4975 NC_015312.1 5332353 5332835 R KEGG: sma:SAV_1362 transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator complement(5332353..5332835) Pseudonocardia dioxanivorans CB1190 10366823 YP_004334967.1 CDS Psed_4976 NC_015312.1 5332920 5333657 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: scl:sce5373 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 5332920..5333657 Pseudonocardia dioxanivorans CB1190 10366824 YP_004334968.1 CDS Psed_4977 NC_015312.1 5333667 5334014 R hypothetical protein complement(5333667..5334014) Pseudonocardia dioxanivorans CB1190 10366825 YP_004334969.1 CDS Psed_4978 NC_015312.1 5334118 5334291 D hypothetical protein 5334118..5334291 Pseudonocardia dioxanivorans CB1190 10366826 YP_004334970.1 CDS Psed_4979 NC_015312.1 5334356 5334898 R KEGG: mjl:Mjls_2672 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(5334356..5334898) Pseudonocardia dioxanivorans CB1190 10366827 YP_004334971.1 CDS Psed_4980 NC_015312.1 5334891 5336729 R PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; KEGG: fri:FraEuI1c_3288 Cl-channel voltage-gated family protein; Cl- channel voltage-gated family protein complement(5334891..5336729) Pseudonocardia dioxanivorans CB1190 10366828 YP_004334972.1 CDS Psed_4981 NC_015312.1 5336792 5337550 R PFAM: Crotonase, core; KEGG: reu:Reut_B5245 enoyl-CoA hydratase; enoyl-CoA hydratase complement(5336792..5337550) Pseudonocardia dioxanivorans CB1190 10366829 YP_004334973.1 CDS Psed_4982 NC_015312.1 5337626 5338021 D KEGG: rop:ROP_34590 molybdenum-pterin binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, MerR; molybdenum-pterin-binding protein 5337626..5338021 Pseudonocardia dioxanivorans CB1190 10366830 YP_004334974.1 CDS Psed_4983 NC_015312.1 5337999 5338991 R KEGG: bbe:BBR47_29730 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; PFAM: Amidohydrolase 2; aminocarboxymuconate-semialdehyde decarboxylase complement(5337999..5338991) Pseudonocardia dioxanivorans CB1190 10366831 YP_004334975.1 CDS Psed_4984 NC_015312.1 5339065 5339667 R PFAM: Isochorismatase-like; KEGG: msp:Mspyr1_17060 nicotinamidase-like amidase; isochorismatase hydrolase complement(5339065..5339667) Pseudonocardia dioxanivorans CB1190 10366832 YP_004334976.1 CDS Psed_4985 NC_015312.1 5339765 5340760 R TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: sro:Sros_4103 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase; zinc-binding alcohol dehydrogenase protein complement(5339765..5340760) Pseudonocardia dioxanivorans CB1190 10366833 YP_004334977.1 CDS Psed_4986 NC_015312.1 5340767 5341810 R PFAM: NADP-dependent oxidoreductase domain; KEGG: sco:SCO7594 oxidoreductase; NADP-dependent oxidoreductase domain-containing protein complement(5340767..5341810) Pseudonocardia dioxanivorans CB1190 10366834 YP_004334978.1 CDS Psed_4987 NC_015312.1 5341867 5342157 R KEGG: amd:AMED_7471 hypothetical protein; hypothetical protein complement(5341867..5342157) Pseudonocardia dioxanivorans CB1190 10366835 YP_004334979.1 CDS Psed_4988 NC_015312.1 5342350 5342838 D PFAM: Protein of unknown function DUF1486; KEGG: fre:Franean1_3128 hypothetical protein; hypothetical protein 5342350..5342838 Pseudonocardia dioxanivorans CB1190 10366836 YP_004334980.1 CDS Psed_4989 NC_015312.1 5342976 5345027 R KEGG: sen:SACE_4181 ATP dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain; PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; DNA primase, small subunit; DNA ligase D complement(5342976..5345027) Pseudonocardia dioxanivorans CB1190 10366837 YP_004334981.1 CDS Psed_4990 NC_015312.1 5345078 5345518 R KEGG: amd:AMED_4381 hypothetical protein; hypothetical protein complement(5345078..5345518) Pseudonocardia dioxanivorans CB1190 10366838 YP_004334982.1 CDS Psed_4991 NC_015312.1 5345521 5345907 R KEGG: sgr:SGR_330 hypothetical protein; hypothetical protein complement(5345521..5345907) Pseudonocardia dioxanivorans CB1190 10366839 YP_004334983.1 CDS Psed_4992 NC_015312.1 5345996 5346190 R hypothetical protein complement(5345996..5346190) Pseudonocardia dioxanivorans CB1190 10366840 YP_004334984.1 CDS Psed_4993 NC_015312.1 5346237 5347922 R PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: mba:Mbar_A2518 sulfate transporter; sulfate transporter complement(5346237..5347922) Pseudonocardia dioxanivorans CB1190 10366841 YP_004334985.1 CDS Psed_4994 NC_015312.1 5348125 5349069 R KEGG: aba:Acid345_3073 zinc-binding alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase complement(5348125..5349069) Pseudonocardia dioxanivorans CB1190 10366842 YP_004334986.1 CDS Psed_4995 NC_015312.1 5349125 5350042 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: mno:Mnod_8441 alcohol dehydrogenase GroES domain protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(5349125..5350042) Pseudonocardia dioxanivorans CB1190 10366843 YP_004334987.1 CDS Psed_4996 NC_015312.1 5350369 5350980 D PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: nml:Namu_0604 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein 5350369..5350980 Pseudonocardia dioxanivorans CB1190 10366844 YP_004334988.1 CDS Psed_4997 NC_015312.1 5350977 5351699 D PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; KEGG: sco:SCO7059 oxidoreductase; oxidoreductase FAD-binding domain-containing protein 5350977..5351699 Pseudonocardia dioxanivorans CB1190 10366845 YP_004334989.1 CDS Psed_4998 NC_015312.1 5351724 5352167 D KEGG: amd:AMED_7516 hypothetical protein; hypothetical protein 5351724..5352167 Pseudonocardia dioxanivorans CB1190 10366846 YP_004334990.1 CDS Psed_4999 NC_015312.1 5352182 5352712 D PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: nml:Namu_3456 methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 5352182..5352712 Pseudonocardia dioxanivorans CB1190 10366847 YP_004334991.1 CDS Psed_5000 NC_015312.1 5352727 5353356 D PFAM: Uracil-DNA glycosylase-like; KEGG: rmu:RMDY18_06580 uracil-DNA glycosylase; uracil-DNA glycosylase 5352727..5353356 Pseudonocardia dioxanivorans CB1190 10366848 YP_004334992.1 CDS Psed_5001 NC_015312.1 5353413 5354312 D PFAM: Peroxiredoxin, OsmC-like protein; GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sml:Smlt2722 OsmC-like protein; OsmC family protein 5353413..5354312 Pseudonocardia dioxanivorans CB1190 10366849 YP_004334993.1 CDS Psed_5002 NC_015312.1 5354447 5354776 R KEGG: sil:SPO2304 hypothetical protein; hypothetical protein complement(5354447..5354776) Pseudonocardia dioxanivorans CB1190 10366850 YP_004334994.1 CDS Psed_5003 NC_015312.1 5354808 5356454 R KEGG: req:REQ_31880 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I complement(5354808..5356454) Pseudonocardia dioxanivorans CB1190 10366851 YP_004334995.1 CDS Psed_5004 NC_015312.1 5356640 5357233 R PFAM: Ferritin/Dps protein; KEGG: sna:Snas_3834 ferritin Dps family protein; ferritin complement(5356640..5357233) Pseudonocardia dioxanivorans CB1190 10366852 YP_004334996.1 CDS Psed_5005 NC_015312.1 5357230 5358429 R KEGG: svi:Svir_15970 transaldolase; TIGRFAM: Transaldolase 2; PFAM: Transaldolase; transaldolase complement(5357230..5358429) Pseudonocardia dioxanivorans CB1190 10366853 YP_004334997.1 CDS Psed_5006 NC_015312.1 5359177 5359854 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bph:Bphy_3981 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 5359177..5359854 Pseudonocardia dioxanivorans CB1190 10366854 YP_004334998.1 CDS Psed_5007 NC_015312.1 5359971 5360576 R KEGG: fri:FraEuI1c_4054 regulatory protein TetR; hypothetical protein complement(5359971..5360576) Pseudonocardia dioxanivorans CB1190 10366855 YP_004334999.1 CDS Psed_5008 NC_015312.1 5360957 5361628 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: saq:Sare_4813 TetR family transcriptional regulator; TetR family transcriptional regulator 5360957..5361628 Pseudonocardia dioxanivorans CB1190 10366856 YP_004335000.1 CDS Psed_5009 NC_015312.1 5361714 5362538 R KEGG: mjl:Mjls_0756 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; estradiol 17-beta-dehydrogenase complement(5361714..5362538) Pseudonocardia dioxanivorans CB1190 10366857 YP_004335001.1 CDS Psed_5010 NC_015312.1 5362661 5362972 D KEGG: jan:Jann_0359 hypothetical protein; hypothetical protein 5362661..5362972 Pseudonocardia dioxanivorans CB1190 10366858 YP_004335002.1 CDS Psed_5011 NC_015312.1 5362996 5363919 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msp:Mspyr1_20300 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(5362996..5363919) Pseudonocardia dioxanivorans CB1190 10366859 YP_004335003.1 CDS Psed_5012 NC_015312.1 5364025 5364345 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sro:Sros_8702 hypothetical protein; antibiotic biosynthesis monooxygenase complement(5364025..5364345) Pseudonocardia dioxanivorans CB1190 10366860 YP_004335004.1 CDS Psed_5013 NC_015312.1 5364501 5365226 R hypothetical protein complement(5364501..5365226) Pseudonocardia dioxanivorans CB1190 10366861 YP_004335005.1 CDS Psed_5014 NC_015312.1 5365294 5366421 R KEGG: svi:Svir_36320 esterase/lipase; esterase complement(5365294..5366421) Pseudonocardia dioxanivorans CB1190 10366862 YP_004335006.1 CDS Psed_5015 NC_015312.1 5366456 5367460 R KEGG: sen:SACE_3297 cobalamin synthesis protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; cobalamin synthesis protein P47K complement(5366456..5367460) Pseudonocardia dioxanivorans CB1190 10366863 YP_004335007.1 CDS Psed_5016 NC_015312.1 5367531 5368097 D PFAM: Polyketide cyclase/dehydrase; KEGG: svi:Svir_02520 polyketide cyclase / dehydrase and lipid transport; polyketide cyclase/dehydrase 5367531..5368097 Pseudonocardia dioxanivorans CB1190 10366864 YP_004335008.1 CDS Psed_5017 NC_015312.1 5368102 5369064 D KEGG: saq:Sare_3490 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase; fructokinase 5368102..5369064 Pseudonocardia dioxanivorans CB1190 10366865 YP_004335009.1 CDS Psed_5018 NC_015312.1 5369449 5369880 D PFAM: Protein of unknown function DUF985; KEGG: rop:ROP_50890 hypothetical protein; hypothetical protein 5369449..5369880 Pseudonocardia dioxanivorans CB1190 10366866 YP_004335010.1 CDS Psed_5019 NC_015312.1 5369926 5370492 D PFAM: Protein of unknown function DUF1707; KEGG: rop:ROP_63340 hypothetical protein; hypothetical protein 5369926..5370492 Pseudonocardia dioxanivorans CB1190 10366867 YP_004335011.1 CDS Psed_5020 NC_015312.1 5370518 5371540 R KEGG: mil:ML5_2527 php domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein complement(5370518..5371540) Pseudonocardia dioxanivorans CB1190 10366868 YP_004335012.1 CDS Psed_5021 NC_015312.1 5371575 5373095 R KEGG: ami:Amir_1092 CHAD domain containing protein; PFAM: CHAD; SMART: CHAD; CHAD domain-containing protein complement(5371575..5373095) Pseudonocardia dioxanivorans CB1190 10366869 YP_004335013.1 CDS Psed_5022 NC_015312.1 5373134 5374606 R KEGG: rop:ROP_30580 FAD-linked oxidase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase complement(5373134..5374606) Pseudonocardia dioxanivorans CB1190 10366870 YP_004335014.1 CDS Psed_5023 NC_015312.1 5374617 5375561 R PFAM: Amine oxidase; KEGG: mau:Micau_2203 amine oxidase; amine oxidase complement(5374617..5375561) Pseudonocardia dioxanivorans CB1190 10366871 YP_004335015.1 CDS Psed_5024 NC_015312.1 5375805 5376779 R KEGG: ami:Amir_0452 O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; mandelate racemase complement(5375805..5376779) Pseudonocardia dioxanivorans CB1190 10366872 YP_004335016.1 CDS Psed_5025 NC_015312.1 5376776 5378257 R KEGG: cti:RALTA_A3198 cyclohexanone monooxygenase, flavin-containing monooxygenase (FMO); PFAM: FAD dependent oxidoreductase; 4-hydroxyacetophenone monooxygenase complement(5376776..5378257) Pseudonocardia dioxanivorans CB1190 10366873 YP_004335017.1 CDS Psed_5026 NC_015312.1 5378326 5378937 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tcu:Tcur_3836 TetR family transcriptional regulator; TetR family transcriptional regulator 5378326..5378937 Pseudonocardia dioxanivorans CB1190 10366874 YP_004335018.1 CDS Psed_5027 NC_015312.1 5378961 5379707 D PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: fal:FRAAL4326 iron utilization protein (partial match); FAD-binding 9 siderophore-interacting domain-containing protein 5378961..5379707 Pseudonocardia dioxanivorans CB1190 10366875 YP_004335019.1 CDS Psed_5028 NC_015312.1 5379786 5380529 D KEGG: kra:Krad_3036 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5379786..5380529 Pseudonocardia dioxanivorans CB1190 10366876 YP_004335020.1 CDS Psed_5029 NC_015312.1 5380526 5382046 D KEGG: amd:AMED_6746 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 5380526..5382046 Pseudonocardia dioxanivorans CB1190 10366877 YP_004335021.1 CDS Psed_5030 NC_015312.1 5382022 5383035 R KEGG: amd:AMED_1207 undecaprenyl-diphosphatase; HAMAP: Bacitracin resistance protein BacA; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase complement(5382022..5383035) Pseudonocardia dioxanivorans CB1190 10366878 YP_004335022.1 CDS Psed_5031 NC_015312.1 5383083 5384570 R KEGG: amd:AMED_7688 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator complement(5383083..5384570) Pseudonocardia dioxanivorans CB1190 10366879 YP_004335023.1 CDS Psed_5032 NC_015312.1 5384912 5385871 D PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: amd:AMED_1208 hypothetical protein; cytochrome c oxidase caa3-type, assembly factor CtaG-like protein 5384912..5385871 Pseudonocardia dioxanivorans CB1190 10366880 YP_004335024.1 CDS Psed_5033 NC_015312.1 5386046 5387308 D PFAM: Glycosyl transferase, family 2; GtrA-like protein; KEGG: fra:Francci3_0318 glycosyl transferase protein; family 2 glycosyl transferase 5386046..5387308 Pseudonocardia dioxanivorans CB1190 10366881 YP_004335025.1 CDS Psed_5034 NC_015312.1 5387305 5389428 D PFAM: Glycosyl transferase, family 39; KEGG: fal:FRAAL3990 integral membrane protein; glycosyl transferase protein 5387305..5389428 Pseudonocardia dioxanivorans CB1190 10366882 YP_004335026.1 CDS Psed_5035 NC_015312.1 5389486 5390064 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_6683 TetR family transcriptional regulator; TetR family transcriptional regulator complement(5389486..5390064) Pseudonocardia dioxanivorans CB1190 10366883 YP_004335027.1 CDS Psed_5036 NC_015312.1 5390104 5390550 D PFAM: Polyketide cyclase/dehydrase; KEGG: amd:AMED_6353 hypothetical protein; polyketide cyclase/dehydrase 5390104..5390550 Pseudonocardia dioxanivorans CB1190 10366884 YP_004335028.1 CDS Psed_5037 NC_015312.1 5390582 5392243 D KEGG: sen:SACE_1293 acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5390582..5392243 Pseudonocardia dioxanivorans CB1190 10366885 YP_004335029.1 CDS Psed_5038 NC_015312.1 5392464 5393627 D KEGG: scb:SCAB_85211 hypothetical protein; hypothetical protein 5392464..5393627 Pseudonocardia dioxanivorans CB1190 10366886 YP_004335030.1 CDS Psed_5039 NC_015312.1 5393696 5394205 D PFAM: Domain of unknown function DUF304l; KEGG: sen:SACE_1222 membrane-flanked domain-containing protein; hypothetical protein 5393696..5394205 Pseudonocardia dioxanivorans CB1190 10366887 YP_004335031.1 CDS Psed_5040 NC_015312.1 5394202 5395857 D PFAM: Domain of unknown function DUF304l; KEGG: ami:Amir_1063 membrane-flanked domain protein; hypothetical protein 5394202..5395857 Pseudonocardia dioxanivorans CB1190 10366888 YP_004335032.1 CDS Psed_5041 NC_015312.1 5395768 5397330 R PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, KEGG: amd:AMED_7081 hypothetical protein; hypothetical protein complement(5395768..5397330) Pseudonocardia dioxanivorans CB1190 10366889 YP_004335033.1 CDS Psed_5042 NC_015312.1 5397362 5397976 D HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: sen:SACE_1292 oligoribonuclease; SMART: Exonuclease; oligoribonuclease 5397362..5397976 Pseudonocardia dioxanivorans CB1190 10366890 YP_004335034.1 CDS Psed_5043 NC_015312.1 5398494 5399063 R KEGG: rso:RSc2905 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(5398494..5399063) Pseudonocardia dioxanivorans CB1190 10366893 YP_004335035.1 CDS Psed_5044 NC_015312.1 5399060 5399761 R PFAM: Isochorismatase-like; KEGG: rhi:NGR_b01900 N-carbamoylsarcosine amidase; isochorismatase hydrolase complement(5399060..5399761) Pseudonocardia dioxanivorans CB1190 10366894 YP_004335036.1 CDS Psed_5045 NC_015312.1 5400032 5400889 D PFAM: ABC transporter-like; KEGG: bbt:BBta_1368 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 5400032..5400889 Pseudonocardia dioxanivorans CB1190 10366895 YP_004335037.1 CDS Psed_5046 NC_015312.1 5400861 5401691 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rhi:NGR_b01890 amino acid ABC transporter, permease; ABC transporter permease 5400861..5401691 Pseudonocardia dioxanivorans CB1190 10366896 YP_004335038.1 CDS Psed_5047 NC_015312.1 5401740 5402762 D KEGG: vap:Vapar_0154 extracellular solute-binding protein, family 3; hypothetical protein 5401740..5402762 Pseudonocardia dioxanivorans CB1190 10366897 YP_004335039.1 CDS Psed_5048 NC_015312.1 5402776 5404224 D KEGG: sto:ST0052 hypothetical protein; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; UbiD family decarboxylase 5402776..5404224 Pseudonocardia dioxanivorans CB1190 10366898 YP_004335040.1 CDS Psed_5049 NC_015312.1 5404250 5404981 D KEGG: bpy:Bphyt_6204 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 5404250..5404981 Pseudonocardia dioxanivorans CB1190 10366899 YP_004335041.1 CDS Psed_5050 NC_015312.1 5404989 5406140 D PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_4340 major facilitator transporter; major facilitator superfamily protein 5404989..5406140 Pseudonocardia dioxanivorans CB1190 10366900 YP_004335042.1 CDS Psed_5051 NC_015312.1 5406157 5407059 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: sen:SACE_2644 LysR family transcriptional regulator; LysR family transcriptional regulator 5406157..5407059 Pseudonocardia dioxanivorans CB1190 10366901 YP_004335043.1 CDS Psed_5052 NC_015312.1 5407139 5408134 D PFAM: Amidohydrolase 2; KEGG: swi:Swit_1683 amidohydrolase 2; amidohydrolase 5407139..5408134 Pseudonocardia dioxanivorans CB1190 10366902 YP_004335044.1 CDS Psed_5053 NC_015312.1 5408131 5408961 D PFAM: Alpha/beta hydrolase fold-1; KEGG: rlg:Rleg_5072 alpha/beta hydrolase fold protein; alpha/beta hydrolase 5408131..5408961 Pseudonocardia dioxanivorans CB1190 10366903 YP_004335045.1 CDS Psed_5054 NC_015312.1 5408958 5409845 D KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 5408958..5409845 Pseudonocardia dioxanivorans CB1190 10366904 YP_004335046.1 CDS Psed_5055 NC_015312.1 5409838 5410329 D KEGG: rxy:Rxyl_1873 (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 5409838..5410329 Pseudonocardia dioxanivorans CB1190 10366905 YP_004335047.1 CDS Psed_5056 NC_015312.1 5410316 5412682 D KEGG: tro:trd_0579 oxidoreductase, large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 5410316..5412682 Pseudonocardia dioxanivorans CB1190 10366906 YP_004335048.1 CDS Psed_5057 NC_015312.1 5412670 5413239 D KEGG: fre:Franean1_3210 carbon monoxide dehydrogenase subunit G; hypothetical protein 5412670..5413239 Pseudonocardia dioxanivorans CB1190 10366907 YP_004335049.1 CDS Psed_5058 NC_015312.1 5413687 5414688 D KEGG: mka:MK0724 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 5413687..5414688 Pseudonocardia dioxanivorans CB1190 10366908 YP_004335050.1 CDS Psed_5059 NC_015312.1 5414792 5415592 D PFAM: Alpha/beta hydrolase fold-1; KEGG: rhi:NGR_b01850 hypothetical protein; alpha/beta hydrolase 5414792..5415592 Pseudonocardia dioxanivorans CB1190 10366909 YP_004335051.1 CDS Psed_5060 NC_015312.1 5415623 5416777 D PFAM: Luciferase-like, subgroup; KEGG: rhi:NGR_b01860 probable monooxygenase; luciferase-like protein 5415623..5416777 Pseudonocardia dioxanivorans CB1190 10366910 YP_004335052.1 CDS Psed_5061 NC_015312.1 5416811 5417665 D PFAM: Alpha/beta hydrolase fold-1; KEGG: mkm:Mkms_3844 alpha/beta hydrolase fold; alpha/beta hydrolase 5416811..5417665 Pseudonocardia dioxanivorans CB1190 10366911 YP_004335053.1 CDS Psed_5062 NC_015312.1 5417834 5418556 D KEGG: cag:Cagg_0349 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator 5417834..5418556 Pseudonocardia dioxanivorans CB1190 10366912 YP_004335054.1 CDS Psed_5063 NC_015312.1 5418579 5419280 R TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: ami:Amir_5484 mycothiol-dependent maleylpyruvate isomerase; hypothetical protein complement(5418579..5419280) Pseudonocardia dioxanivorans CB1190 10366913 YP_004335055.1 CDS Psed_5064 NC_015312.1 5419277 5420962 R KEGG: saq:Sare_4933 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; (2,3-dihydroxybenzoyl)adenylate synthase complement(5419277..5420962) Pseudonocardia dioxanivorans CB1190 10366914 YP_004335056.1 CDS Psed_5065 NC_015312.1 5420943 5422985 R KEGG: cfl:Cfla_0296 CoA-binding domain protein; PFAM: CoA-binding; SMART: CoA-binding; CoA-binding domain-containing protein complement(5420943..5422985) Pseudonocardia dioxanivorans CB1190 10366915 YP_004335057.1 CDS Psed_5066 NC_015312.1 5422982 5424547 R PFAM: Monooxygenase, FAD-binding; KEGG: cwo:Cwoe_2817 monooxygenase FAD-binding protein; monooxygenase FAD-binding protein complement(5422982..5424547) Pseudonocardia dioxanivorans CB1190 10366916 YP_004335058.1 CDS Psed_5067 NC_015312.1 5424547 5425359 R KEGG: cfl:Cfla_0281 fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase complement(5424547..5425359) Pseudonocardia dioxanivorans CB1190 10366917 YP_004335059.1 CDS Psed_5068 NC_015312.1 5425356 5426441 R PFAM: Cupin 2, conserved barrel; KEGG: aau:AAur_0331 gentisate 1,2-dioxygenase; cupin complement(5425356..5426441) Pseudonocardia dioxanivorans CB1190 10366918 YP_004335060.1 CDS Psed_5069 NC_015312.1 5426803 5427627 R PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal; KEGG: bbe:BBR47_49950 phenylacetic acid degradation operon negative regulatory protein; PaaX family transcriptional regulator complement(5426803..5427627) Pseudonocardia dioxanivorans CB1190 10366919 YP_004335061.1 CDS Psed_5070 NC_015312.1 5427805 5428440 R PFAM: SNARE associated Golgi protein; KEGG: mul:MUL_3280 transmembrane protein DedA; hypothetical protein complement(5427805..5428440) Pseudonocardia dioxanivorans CB1190 10366920 YP_004335062.1 CDS Psed_5071 NC_015312.1 5428579 5429736 D KEGG: tbi:Tbis_2824 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 5428579..5429736 Pseudonocardia dioxanivorans CB1190 10366921 YP_004335063.1 CDS Psed_5072 NC_015312.1 5429804 5430118 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ccs:CCNA_02049 ABM superfamily monooxygenase; antibiotic biosynthesis monooxygenase 5429804..5430118 Pseudonocardia dioxanivorans CB1190 10366922 YP_004335064.1 CDS Psed_5073 NC_015312.1 5430134 5431639 R TIGRFAM: Glycerol kinase; KEGG: saq:Sare_4607 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; glycerol kinase complement(5430134..5431639) Pseudonocardia dioxanivorans CB1190 10366923 YP_004335065.1 CDS Psed_5074 NC_015312.1 5431737 5432498 R KEGG: gob:Gobs_5039 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator complement(5431737..5432498) Pseudonocardia dioxanivorans CB1190 10366924 YP_004335066.1 CDS Psed_5075 NC_015312.1 5432679 5433497 D KEGG: sro:Sros_7483 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein; MIP family channel protein 5432679..5433497 Pseudonocardia dioxanivorans CB1190 10366925 YP_004335067.1 CDS Psed_5076 NC_015312.1 5433516 5435033 D PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; TIGRFAM: Glycerol kinase; HAMAP: Glycerol kinase; KEGG: kfl:Kfla_3196 glycerol kinase; glycerol kinase 5433516..5435033 Pseudonocardia dioxanivorans CB1190 10366926 YP_004335068.1 CDS Psed_5077 NC_015312.1 5435068 5436777 D KEGG: scb:SCAB_36181 glycerol phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 5435068..5436777 Pseudonocardia dioxanivorans CB1190 10366927 YP_004335069.1 CDS Psed_5078 NC_015312.1 5436833 5438050 R TIGRFAM: Kynureninase; KEGG: amd:AMED_6396 kynureninase; PFAM: Aminotransferase, class V/Cysteine desulfurase; kynureninase complement(5436833..5438050) Pseudonocardia dioxanivorans CB1190 10366928 YP_004335070.1 CDS Psed_5079 NC_015312.1 5438053 5438898 R PFAM: Tryptophan 2,3-dioxygenase; KEGG: kra:Krad_1864 tryptophan 23-dioxygenase; tryptophan 23-dioxygenase complement(5438053..5438898) Pseudonocardia dioxanivorans CB1190 10366929 YP_004335071.1 CDS Psed_5080 NC_015312.1 5438973 5439698 R KEGG: sna:Snas_2830 transcriptional regulator; transcriptional regulator complement(5438973..5439698) Pseudonocardia dioxanivorans CB1190 10366930 YP_004335072.1 CDS Psed_5081 NC_015312.1 5439796 5440224 D PFAM: Uncharacterised protein family YphA; KEGG: rha:RHA1_ro04235 hypothetical protein; DoxX family protein 5439796..5440224 Pseudonocardia dioxanivorans CB1190 10366931 YP_004335073.1 CDS Psed_5082 NC_015312.1 5440378 5441589 R KEGG: amd:AMED_3585 YVTN beta-propeller repeat-containing protein; hypothetical protein complement(5440378..5441589) Pseudonocardia dioxanivorans CB1190 10366932 YP_004335074.1 CDS Psed_5083 NC_015312.1 5441600 5442385 R PFAM: Polysaccharide deacetylase; KEGG: amd:AMED_3586 polysaccharide deacetylase; polysaccharide deacetylase complement(5441600..5442385) Pseudonocardia dioxanivorans CB1190 10366933 YP_004335075.1 CDS Psed_5084 NC_015312.1 5442674 5444380 D PFAM: Major facilitator superfamily MFS-1; KEGG: fri:FraEuI1c_1649 major facilitator superfamily MFS_1; major facilitator superfamily protein 5442674..5444380 Pseudonocardia dioxanivorans CB1190 10366934 YP_004335076.1 CDS Psed_5085 NC_015312.1 5444393 5445550 D PFAM: esterase; KEGG: amd:AMED_0317 esterase/lipase-like protein; esterase 5444393..5445550 Pseudonocardia dioxanivorans CB1190 10366935 YP_004335077.1 CDS Psed_5086 NC_015312.1 5445631 5447067 R TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: kfl:Kfla_1879 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase complement(5445631..5447067) Pseudonocardia dioxanivorans CB1190 10366936 YP_004335078.1 CDS Psed_5087 NC_015312.1 5447213 5448022 D PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 5447213..5448022 Pseudonocardia dioxanivorans CB1190 10366937 YP_004335079.1 CDS Psed_5088 NC_015312.1 5448024 5448821 R TIGRFAM: Conserved hypothetical protein CHP03843; KEGG: sen:SACE_2204 phosphatidylinositol 3-and 4-kinase, catalytic; hypothetical protein complement(5448024..5448821) Pseudonocardia dioxanivorans CB1190 10366938 YP_004335080.1 CDS Psed_5089 NC_015312.1 5448832 5449401 R TIGRFAM: Protein of unknown function DUF3090; KEGG: sen:SACE_2203 hypothetical protein; hypothetical protein complement(5448832..5449401) Pseudonocardia dioxanivorans CB1190 10366939 YP_004335081.1 CDS Psed_5090 NC_015312.1 5449492 5450190 R TIGRFAM: Phosphomutase MSMEG4193, PFAM: Histidine phosphatase superfamily, clade-1; KEGG: svi:Svir_20000 fructose-2,6-bisphosphatase; SMART: Histidine phosphatase superfamily, clade-1; phosphomutase complement(5449492..5450190) Pseudonocardia dioxanivorans CB1190 10366940 YP_004335082.1 CDS Psed_5091 NC_015312.1 5450258 5451079 R TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Bacitracin resistance protein BacA; KEGG: rer:RER_32020 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase complement(5450258..5451079) Pseudonocardia dioxanivorans CB1190 10366941 YP_004335083.1 CDS Psed_5092 NC_015312.1 5451161 5452105 D PFAM: NADP-dependent oxidoreductase domain; KEGG: svi:Svir_20030 predicted oxidoreductase, aryl-alcohol dehydrogenase like protein; NADP-dependent oxidoreductase domain-containing protein 5451161..5452105 Pseudonocardia dioxanivorans CB1190 10366942 YP_004335084.1 CDS Psed_5093 NC_015312.1 5452317 5452556 D KEGG: svi:Svir_20050 hypothetical protein; hypothetical protein 5452317..5452556 Pseudonocardia dioxanivorans CB1190 10366943 YP_004335085.1 CDS Psed_5094 NC_015312.1 5452666 5454108 D manually curated; KEGG: nml:Namu_1085 hypothetical protein; hypothetical protein 5452666..5454108 Pseudonocardia dioxanivorans CB1190 10366944 YP_004335086.1 CDS Psed_5095 NC_015312.1 5454175 5455158 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: rha:RHA1_ro02339 NADPH:quinone reductase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(5454175..5455158) Pseudonocardia dioxanivorans CB1190 10366945 YP_004335087.1 CDS Psed_5096 NC_015312.1 5455233 5456042 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_4573 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5455233..5456042) Pseudonocardia dioxanivorans CB1190 10366946 YP_004335088.1 CDS Psed_5097 NC_015312.1 5456059 5457375 R KEGG: svi:Svir_17060 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; succinyl-diaminopimelate desuccinylase complement(5456059..5457375) Pseudonocardia dioxanivorans CB1190 10366947 YP_004335089.1 CDS Psed_5099 NC_015312.1 5458043 5458327 D hypothetical protein 5458043..5458327 Pseudonocardia dioxanivorans CB1190 10366950 YP_004335090.1 CDS Psed_5100 NC_015312.1 5458380 5458673 D hypothetical protein 5458380..5458673 Pseudonocardia dioxanivorans CB1190 10366951 YP_004335091.1 CDS Psed_5101 NC_015312.1 5458711 5459193 D KEGG: sen:SACE_5164 phosphohistidine phosphatase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphohistidine phosphatase SixA 5458711..5459193 Pseudonocardia dioxanivorans CB1190 10366952 YP_004335092.1 CDS Psed_5102 NC_015312.1 5459409 5460821 D TIGRFAM: Domain of unknown function DUF11; KEGG: sus:Acid_0721 FG-GAP repeat-containing protein; hypothetical protein 5459409..5460821 Pseudonocardia dioxanivorans CB1190 10366953 YP_004335093.1 CDS Psed_5103 NC_015312.1 5461018 5462922 D KEGG: cgr:CAGL0J02552g hypothetical protein; hypothetical protein 5461018..5462922 Pseudonocardia dioxanivorans CB1190 10366954 YP_004335094.1 CDS Psed_5104 NC_015312.1 5463175 5463642 R KEGG: rop:ROP_16280 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(5463175..5463642) Pseudonocardia dioxanivorans CB1190 10366955 YP_004335095.1 CDS Psed_5105 NC_015312.1 5463620 5464732 R PFAM: Luciferase-like, subgroup; KEGG: rha:RHA1_ro01948 alkanal monooxygenase; luciferase-like protein complement(5463620..5464732) Pseudonocardia dioxanivorans CB1190 10366956 YP_004335096.1 CDS Psed_5106 NC_015312.1 5465033 5466259 D KEGG: msl:Msil_1993 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein 5465033..5466259 Pseudonocardia dioxanivorans CB1190 10366957 YP_004335097.1 CDS Psed_5107 NC_015312.1 5466327 5468162 R PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; KEGG: sro:Sros_6271 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase complement(5466327..5468162) Pseudonocardia dioxanivorans CB1190 10366958 YP_004335098.1 CDS Psed_5108 NC_015312.1 5468172 5468720 R KEGG: sco:SCO2788 hypothetical protein; hypothetical protein complement(5468172..5468720) Pseudonocardia dioxanivorans CB1190 10366959 YP_004335099.1 CDS Psed_5109 NC_015312.1 5468836 5469702 D PFAM: Domain of unknown function DUF559; KEGG: msm:MSMEG_5844 hypothetical protein; hypothetical protein 5468836..5469702 Pseudonocardia dioxanivorans CB1190 10366960 YP_004335100.1 CDS Psed_5110 NC_015312.1 5469900 5473760 R PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Pentapeptide repeat; KEGG: ami:Amir_6252 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase complement(5469900..5473760) Pseudonocardia dioxanivorans CB1190 10366961 YP_004335101.1 CDS Psed_5111 NC_015312.1 5474004 5475563 D KEGG: rha:RHA1_ro02658 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5474004..5475563 Pseudonocardia dioxanivorans CB1190 10366962 YP_004335102.1 CDS Psed_5112 NC_015312.1 5475628 5476452 D PFAM: Protein of unknown function DUF427; KEGG: rop:ROP_58660 hypothetical protein; hypothetical protein 5475628..5476452 Pseudonocardia dioxanivorans CB1190 10366963 YP_004335103.1 CDS Psed_5113 NC_015312.1 5476504 5477544 D KEGG: nda:Ndas_3206 F420-dependent oxidoreductase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv3520c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 5476504..5477544 Pseudonocardia dioxanivorans CB1190 10366964 YP_004335104.1 CDS Psed_5114 NC_015312.1 5477558 5478175 D KEGG: rpc:RPC_2505 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 5477558..5478175 Pseudonocardia dioxanivorans CB1190 10366965 YP_004335105.1 CDS Psed_5115 NC_015312.1 5478383 5482174 D SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: ami:Amir_6253 alpha-ketoglutarate decarboxylase; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoacid dehydrogenase acyltransferase, catalytic domain; 2-oxoglutarate dehydrogenase E1 5478383..5482174 Pseudonocardia dioxanivorans CB1190 10366966 YP_004335106.1 CDS Psed_5116 NC_015312.1 5482276 5482446 D KEGG: ami:Amir_6254 hypothetical protein; hypothetical protein 5482276..5482446 Pseudonocardia dioxanivorans CB1190 10366967 YP_004335107.1 CDS Psed_5117 NC_015312.1 5482498 5482911 R KEGG: ami:Amir_0541 hypothetical protein; hypothetical protein complement(5482498..5482911) Pseudonocardia dioxanivorans CB1190 10366968 YP_004335108.1 CDS Psed_5118 NC_015312.1 5482908 5485784 R PFAM: Cell divisionFtsK/SpoIIIE; KEGG: ami:Amir_0542 cell divisionFtsK/SpoIIIE; DNA translocase FtsK complement(5482908..5485784) Pseudonocardia dioxanivorans CB1190 10366969 YP_004335109.1 CDS Psed_5119 NC_015312.1 5485798 5486046 R hypothetical protein complement(5485798..5486046) Pseudonocardia dioxanivorans CB1190 10366970 YP_004335110.1 CDS Psed_5120 NC_015312.1 5486077 5486337 R KEGG: sen:SACE_0669 hypothetical protein; hypothetical protein complement(5486077..5486337) Pseudonocardia dioxanivorans CB1190 10366971 YP_004335111.1 CDS Psed_5121 NC_015312.1 5486548 5487207 R KEGG: sen:SACE_3894 integral membrane protein; hypothetical protein complement(5486548..5487207) Pseudonocardia dioxanivorans CB1190 10366972 YP_004335112.1 CDS Psed_5122 NC_015312.1 5487382 5488950 R KEGG: sen:SACE_1822 spore coat protein (outer); PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; Multicopper oxidase, type 1; bilirubin oxidase complement(5487382..5488950) Pseudonocardia dioxanivorans CB1190 10366973 YP_004335113.1 CDS Psed_5123 NC_015312.1 5488947 5489396 R KEGG: kfl:Kfla_5958 hypothetical protein; hypothetical protein complement(5488947..5489396) Pseudonocardia dioxanivorans CB1190 10366974 YP_004335114.1 CDS Psed_5124 NC_015312.1 5489486 5489824 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: kfl:Kfla_7067 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 5489486..5489824 Pseudonocardia dioxanivorans CB1190 10366975 YP_004335115.1 CDS Psed_5125 NC_015312.1 5489806 5490468 D KEGG: mil:ML5_1039 hypothetical protein; hypothetical protein 5489806..5490468 Pseudonocardia dioxanivorans CB1190 10366976 YP_004335116.1 CDS Psed_5126 NC_015312.1 5490518 5491717 R PFAM: Luciferase-like, subgroup; KEGG: rha:RHA1_ro11046 limonene 1,2-monooxygenase (NADH-dependent); luciferase-like protein complement(5490518..5491717) Pseudonocardia dioxanivorans CB1190 10366977 YP_004335117.1 CDS Psed_5127 NC_015312.1 5491747 5492817 R PFAM: Helix-turn-helix, Fis-type; GAF; KEGG: msm:MSMEG_1970 sigma factor; Fis family transcriptional regulator complement(5491747..5492817) Pseudonocardia dioxanivorans CB1190 10366978 YP_004335118.1 CDS Psed_5128 NC_015312.1 5492993 5493916 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: scb:SCAB_8441 oxidoreductase; short-chain dehydrogenase/reductase SDR 5492993..5493916 Pseudonocardia dioxanivorans CB1190 10366979 YP_004335119.1 CDS Psed_5129 NC_015312.1 5493907 5494329 R PFAM: Transcription regulator PadR N-terminal-like; KEGG: mta:Moth_2210 PadR family transcriptional regulator; PadR-like family transcriptional regulator complement(5493907..5494329) Pseudonocardia dioxanivorans CB1190 10366980 YP_004335120.1 CDS Psed_5130 NC_015312.1 5494476 5495396 R PFAM: ABC-type glycine betaine transport system, substrate-binding domain; KEGG: rop:ROP_60640 ABC transporter substrate-binding protein; glycine/betaine ABC transporter substrate-binding protein complement(5494476..5495396) Pseudonocardia dioxanivorans CB1190 10366981 YP_004335121.1 CDS Psed_5131 NC_015312.1 5495430 5496146 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_2815 ABC-type proline/glycine betaine transport systems, permease component; ABC transporter permease complement(5495430..5496146) Pseudonocardia dioxanivorans CB1190 10366982 YP_004335122.1 CDS Psed_5132 NC_015312.1 5496143 5496805 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_7958 permease component of ABC-type proline/glycine betaine transport system; ABC transporter permease complement(5496143..5496805) Pseudonocardia dioxanivorans CB1190 10366983 YP_004335123.1 CDS Psed_5133 NC_015312.1 5496817 5497899 R SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: ami:Amir_6271 ABC transporter related; PFAM: ABC transporter-like; glycine/betaine/L-proline ABC transporter ATPase complement(5496817..5497899) Pseudonocardia dioxanivorans CB1190 10366984 YP_004335124.1 CDS Psed_5134 NC_015312.1 5498044 5500821 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-4; KEGG: ami:Amir_6278 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(5498044..5500821) Pseudonocardia dioxanivorans CB1190 10366985 YP_004335125.1 CDS Psed_5135 NC_015312.1 5501041 5502204 R KEGG: nfa:nfa47090 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding; malic protein NAD-binding protein complement(5501041..5502204) Pseudonocardia dioxanivorans CB1190 10366986 YP_004335126.1 CDS Psed_5136 NC_015312.1 5502445 5503233 R PFAM: Alpha/beta hydrolase fold-1; KEGG: rha:RHA1_ro03350 hydrolase; alpha/beta hydrolase complement(5502445..5503233) Pseudonocardia dioxanivorans CB1190 10366987 YP_004335127.1 CDS Psed_5137 NC_015312.1 5503328 5503702 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sro:Sros_1993 glyoxalase/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5503328..5503702 Pseudonocardia dioxanivorans CB1190 10366988 YP_004335128.1 CDS Psed_5138 NC_015312.1 5503707 5504051 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sro:Sros_8702 hypothetical protein; antibiotic biosynthesis monooxygenase complement(5503707..5504051) Pseudonocardia dioxanivorans CB1190 10366989 YP_004335129.1 CDS Psed_5139 NC_015312.1 5504237 5504629 D KEGG: amd:AMED_6356 hypothetical protein; hypothetical protein 5504237..5504629 Pseudonocardia dioxanivorans CB1190 10366990 YP_004335130.1 CDS Psed_5140 NC_015312.1 5504626 5504799 D hypothetical protein 5504626..5504799 Pseudonocardia dioxanivorans CB1190 10366991 YP_004335131.1 CDS Psed_5141 NC_015312.1 5504879 5505553 D KEGG: amd:AMED_6358 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 5504879..5505553 Pseudonocardia dioxanivorans CB1190 10366992 YP_004335132.1 CDS Psed_5142 NC_015312.1 5505775 5507253 D KEGG: amd:AMED_6359 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; ATPase-like, ATP-binding domain; histidine kinase 5505775..5507253 Pseudonocardia dioxanivorans CB1190 10366993 YP_004335133.1 CDS Psed_5143 NC_015312.1 5507228 5507557 R KEGG: sen:SACE_6418 hypothetical protein; manually curated; PFAM: Peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B, conserved region complement(5507228..5507557) Pseudonocardia dioxanivorans CB1190 10366994 YP_004335134.1 CDS Psed_5144 NC_015312.1 5507656 5508069 D TIGRFAM: Superoxide dismutase, Nickel-type; KEGG: sen:SACE_6419 superoxide dismutase; PFAM: Superoxide dismutase, Nickel-type; superoxide dismutase, Ni 5507656..5508069 Pseudonocardia dioxanivorans CB1190 10366995 YP_004335135.1 CDS Psed_5145 NC_015312.1 5509091 5509849 D PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: nfa:nfa6830 RNA pseudouridylate synthase; pseudouridine synthase 5509091..5509849 Pseudonocardia dioxanivorans CB1190 10366996 YP_004335136.1 CDS Psed_5146 NC_015312.1 5509940 5510431 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: rha:RHA1_ro01543 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein 5509940..5510431 Pseudonocardia dioxanivorans CB1190 10366997 YP_004335137.1 CDS Psed_5147 NC_015312.1 5510491 5511165 D PFAM: Methyltransferase type 11; KEGG: req:REQ_07710 sam dependent methyltransferase; type 11 methyltransferase 5510491..5511165 Pseudonocardia dioxanivorans CB1190 10366998 YP_004335138.1 CDS Psed_5148 NC_015312.1 5511193 5511801 D KEGG: amd:AMED_7967 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 5511193..5511801 Pseudonocardia dioxanivorans CB1190 10366999 YP_004335139.1 CDS Psed_5149 NC_015312.1 5511817 5512347 R PFAM: YkuD domain; KEGG: sen:SACE_4786 secreted protein; ErfK/YbiS/YcfS/YnhG family protein complement(5511817..5512347) Pseudonocardia dioxanivorans CB1190 10367000 YP_004335140.1 CDS Psed_5150 NC_015312.1 5512469 5513017 D PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amd:AMED_7968 acetyltransferase; GCN5-like N-acetyltransferase 5512469..5513017 Pseudonocardia dioxanivorans CB1190 10367001 YP_004335141.1 CDS Psed_5151 NC_015312.1 5512962 5513402 R KEGG: ami:Amir_6287 hypothetical protein; hypothetical protein complement(5512962..5513402) Pseudonocardia dioxanivorans CB1190 10367002 YP_004335142.1 CDS Psed_5152 NC_015312.1 5513436 5514365 D KEGG: ami:Amir_6288 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic domain; SMART: Diacylglycerol kinase, catalytic domain; diacylglycerol kinase catalytic subunit 5513436..5514365 Pseudonocardia dioxanivorans CB1190 10367003 YP_004335143.1 CDS Psed_5153 NC_015312.1 5514782 5515033 D PFAM: Transcription factor WhiB; KEGG: ami:Amir_6289 transcription factor WhiB; transcription factor WhiB 5514782..5515033 Pseudonocardia dioxanivorans CB1190 10367004 YP_004335144.1 CDS Psed_5154 NC_015312.1 5515270 5516769 R KEGG: sen:SACE_6427 two-component system sensor kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; PAS fold-4; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; signal transduction histidine kinase complement(5515270..5516769) Pseudonocardia dioxanivorans CB1190 10367005 YP_004335145.1 CDS Psed_5155 NC_015312.1 5517026 5517370 R TIGRFAM: Anti-sigma factor RshA; KEGG: sen:SACE_6429 anti-sigma factor; anti-sigma factor complement(5517026..5517370) Pseudonocardia dioxanivorans CB1190 10367006 YP_004335146.1 CDS Psed_5156 NC_015312.1 5517367 5518161 R KEGG: ami:Amir_6292 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(5517367..5518161) Pseudonocardia dioxanivorans CB1190 10367007 YP_004335147.1 CDS Psed_5157 NC_015312.1 5518168 5518716 D KEGG: amd:AMED_7976 YbaK/EbsC protein; TIGRFAM: Prolyl-tRNA editing protein, YbaK/EbsC; PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; ybaK/ebsC protein 5518168..5518716 Pseudonocardia dioxanivorans CB1190 10367008 YP_004335148.1 CDS Psed_5158 NC_015312.1 5518755 5519069 R KEGG: afo:Afer_1368 protein of unknown function DUF74; HAMAP: Uncharacterised protein family UPF0145; PFAM: Uncharacterised protein family UPF0145; hypothetical protein complement(5518755..5519069) Pseudonocardia dioxanivorans CB1190 10367009 YP_004335149.1 CDS Psed_5159 NC_015312.1 5519112 5519747 R KEGG: ami:Amir_6294 hypothetical protein; hypothetical protein complement(5519112..5519747) Pseudonocardia dioxanivorans CB1190 10367010 YP_004335150.1 CDS Psed_5160 NC_015312.1 5519744 5520556 R PFAM: Protein of unknown function DUF159; KEGG: amd:AMED_7978 hypothetical protein; hypothetical protein complement(5519744..5520556) Pseudonocardia dioxanivorans CB1190 10367011 YP_004335151.1 CDS Psed_5161 NC_015312.1 5520589 5521863 D PFAM: Enolpyruvate transferase domain; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: ami:Amir_6296 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 5520589..5521863 Pseudonocardia dioxanivorans CB1190 10367012 YP_004335152.1 CDS Psed_5162 NC_015312.1 5521871 5522872 D PFAM: Ribosome biogenesis GTPase RsgA, KEGG: sen:SACE_6436 GTPase EngC; GTPase EngC 5521871..5522872 Pseudonocardia dioxanivorans CB1190 10367013 YP_004335153.1 CDS Psed_5163 NC_015312.1 5522898 5523707 D KEGG: sen:SACE_6437 hypothetical protein; hypothetical protein 5522898..5523707 Pseudonocardia dioxanivorans CB1190 10367014 YP_004335154.1 CDS Psed_5164 NC_015312.1 5523704 5525134 D KEGG: ami:Amir_1754 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 5523704..5525134 Pseudonocardia dioxanivorans CB1190 10367015 YP_004335155.1 CDS Psed_5165 NC_015312.1 5525139 5525711 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_0302 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5525139..5525711) Pseudonocardia dioxanivorans CB1190 10367016 YP_004335156.1 CDS Psed_5166 NC_015312.1 5525808 5526185 D KEGG: mkm:Mkms_2678 hypothetical protein; hypothetical protein 5525808..5526185 Pseudonocardia dioxanivorans CB1190 10367017 YP_004335157.1 CDS Psed_5167 NC_015312.1 5526211 5527854 R TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; KEGG: sen:SACE_1979 delta-1-pyrroline-5-carboxylate dehydrogenase precursor; PFAM: Aldehyde dehydrogenase domain; delta-1-pyrroline-5-carboxylate dehydrogenase complement(5526211..5527854) Pseudonocardia dioxanivorans CB1190 10367018 YP_004335158.1 CDS Psed_5168 NC_015312.1 5527939 5528532 D PFAM: Protein of unknown function DUF1707; KEGG: nml:Namu_4245 hypothetical protein; hypothetical protein 5527939..5528532 Pseudonocardia dioxanivorans CB1190 10367019 YP_004335159.1 CDS Psed_5169 NC_015312.1 5528539 5529411 R PFAM: Crotonase, core; KEGG: sen:SACE_3450 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase complement(5528539..5529411) Pseudonocardia dioxanivorans CB1190 10367020 YP_004335160.1 CDS Psed_5170 NC_015312.1 5529525 5530343 D PFAM: Formate/nitrite transporter; KEGG: kra:Krad_3500 formate/nitrite family of transporters-like protein; formate/nitrite transporter 5529525..5530343 Pseudonocardia dioxanivorans CB1190 10367021 YP_004335161.1 CDS Psed_5171 NC_015312.1 5530375 5530881 R KEGG: ami:Amir_6299 hypothetical protein; hypothetical protein complement(5530375..5530881) Pseudonocardia dioxanivorans CB1190 10367022 YP_004335162.1 CDS Psed_5172 NC_015312.1 5530906 5532315 R KEGG: ami:Amir_6300 acyltransferase, WS/DGAT/MGAT; TIGRFAM: Acyltransferase, WS/DGAT/MGAT; PFAM: O-acyltransferase, WSD1, N-terminal; acyltransferase complement(5530906..5532315) Pseudonocardia dioxanivorans CB1190 10367023 YP_004335163.1 CDS Psed_5173 NC_015312.1 5532352 5533122 D KEGG: ami:Amir_6302 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU 5532352..5533122 Pseudonocardia dioxanivorans CB1190 10367024 YP_004335164.1 CDS Psed_5174 NC_015312.1 5533196 5534749 D KEGG: amd:AMED_0219 hypothetical protein; hypothetical protein 5533196..5534749 Pseudonocardia dioxanivorans CB1190 10367025 YP_004335165.1 CDS Psed_5175 NC_015312.1 5534759 5535979 D KEGG: amd:AMED_2112 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase 5534759..5535979 Pseudonocardia dioxanivorans CB1190 10367026 YP_004335166.1 CDS Psed_5176 NC_015312.1 5536015 5536239 D KEGG: mil:ML5_0745 hypothetical protein; hypothetical protein 5536015..5536239 Pseudonocardia dioxanivorans CB1190 10367027 YP_004335167.1 CDS Psed_5177 NC_015312.1 5536252 5537124 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HTH transcriptional regulator, MarR; KEGG: ami:Amir_6303 HAD-superfamily hydrolase, subfamily IA, variant 3; SMART: HTH transcriptional regulator, MarR; HAD-superfamily hydrolase complement(5536252..5537124) Pseudonocardia dioxanivorans CB1190 10367028 YP_004335168.1 CDS Psed_5178 NC_015312.1 5537267 5538061 D KEGG: rrs:RoseRS_1726 dihydrolipoyllysine-residue succinyltransferase; hypothetical protein 5537267..5538061 Pseudonocardia dioxanivorans CB1190 10367029 YP_004335169.1 CDS Psed_5179 NC_015312.1 5538316 5541174 R SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; TIGRFAM: SecA protein; KEGG: svi:Svir_30890 preprotein translocase subunit SecA; HAMAP: SecA protein; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; protein translocase subunit secA complement(5538316..5541174) Pseudonocardia dioxanivorans CB1190 10367030 YP_004335170.1 CDS Psed_5180 NC_015312.1 5541381 5542079 R KEGG: ami:Amir_6306 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(5541381..5542079) Pseudonocardia dioxanivorans CB1190 10367031 YP_004335171.1 CDS Psed_5181 NC_015312.1 5542408 5543211 R PFAM: Phosphoribosyltransferase; KEGG: nml:Namu_1364 phosphoribosyltransferase; phosphoribosyltransferase complement(5542408..5543211) Pseudonocardia dioxanivorans CB1190 10367032 YP_004335172.1 CDS Psed_5182 NC_015312.1 5543325 5545037 R KEGG: amd:AMED_7991 lipoprotein; PFAM: Lipoprotein LpqB, beta-propeller domain, C-terminal; GerMN domain; SMART: GerMN domain; Lipoprotein LpqB, beta-propeller domain-containing protein complement(5543325..5545037) Pseudonocardia dioxanivorans CB1190 10367033 YP_004335173.1 CDS Psed_5183 NC_015312.1 5545388 5547178 R KEGG: ami:Amir_6309 histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase complement(5545388..5547178) Pseudonocardia dioxanivorans CB1190 10367034 YP_004335174.1 CDS Psed_5184 NC_015312.1 5547528 5548205 R KEGG: ami:Amir_6310 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(5547528..5548205) Pseudonocardia dioxanivorans CB1190 10367035 YP_004335175.1 CDS Psed_5185 NC_015312.1 5548255 5548899 R PFAM: Thymidylate kinase; KEGG: amd:AMED_7999 dTMP kinase; thymidylate kinase complement(5548255..5548899) Pseudonocardia dioxanivorans CB1190 10367036 YP_004335176.1 CDS Psed_5186 NC_015312.1 5548911 5549396 R PFAM: NUDIX hydrolase domain; KEGG: sro:Sros_0188 hypothetical protein; NUDIX hydrolase complement(5548911..5549396) Pseudonocardia dioxanivorans CB1190 10367037 YP_004335177.1 CDS Psed_5187 NC_015312.1 5549410 5550921 R PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding; TIGRFAM: Adenosylhomocysteinase; HAMAP: Adenosylhomocysteinase; KEGG: amd:AMED_8006 adenosylhomocysteinase; adenosylhomocysteinase complement(5549410..5550921) Pseudonocardia dioxanivorans CB1190 10367038 YP_004335178.1 CDS Psed_5188 NC_015312.1 5551360 5552652 R KEGG: mil:ML5_5270 hypothetical protein; hypothetical protein complement(5551360..5552652) Pseudonocardia dioxanivorans CB1190 10367039 YP_004335179.1 CDS Psed_5189 NC_015312.1 5552805 5554448 D KEGG: mva:Mvan_0905 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 5552805..5554448 Pseudonocardia dioxanivorans CB1190 10367040 YP_004335180.1 CDS Psed_5190 NC_015312.1 5554567 5555181 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_5224 TetR family transcriptional regulator; TetR family transcriptional regulator 5554567..5555181 Pseudonocardia dioxanivorans CB1190 10367041 YP_004335181.1 CDS Psed_5191 NC_015312.1 5555178 5556449 D KEGG: fre:Franean1_5223 glycosyl transferase protein; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; MGT family glycosyltransferase 5555178..5556449 Pseudonocardia dioxanivorans CB1190 10367042 YP_004335182.1 CDS Psed_5192 NC_015312.1 5556600 5557670 D PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: kfl:Kfla_0865 hypothetical protein; hypothetical protein 5556600..5557670 Pseudonocardia dioxanivorans CB1190 10367043 YP_004335183.1 CDS Psed_5193 NC_015312.1 5557680 5559209 R PFAM: Amino acid permease domain; KEGG: ami:Amir_6322 amino acid permease-associated region; amino acid permease complement(5557680..5559209) Pseudonocardia dioxanivorans CB1190 10367044 YP_004335184.1 CDS Psed_5194 NC_015312.1 5559986 5560135 R hypothetical protein complement(5559986..5560135) Pseudonocardia dioxanivorans CB1190 10367045 YP_004335185.1 CDS Psed_5195 NC_015312.1 5560135 5561250 R TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: mkm:Mkms_2150 L-alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal; alanine dehydrogenase complement(5560135..5561250) Pseudonocardia dioxanivorans CB1190 10367046 YP_004335186.1 CDS Psed_5196 NC_015312.1 5561348 5561857 D KEGG: mab:MAB_3099c AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 5561348..5561857 Pseudonocardia dioxanivorans CB1190 10367047 YP_004335187.1 CDS Psed_5197 NC_015312.1 5561870 5562799 R KEGG: amd:AMED_8010 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter complement(5561870..5562799) Pseudonocardia dioxanivorans CB1190 10367048 YP_004335188.1 CDS Psed_5198 NC_015312.1 5562888 5564105 R TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: svi:Svir_30990 mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type I; mannose-6-phosphate isomerase complement(5562888..5564105) Pseudonocardia dioxanivorans CB1190 10367049 YP_004335189.1 CDS Psed_5199 NC_015312.1 5564155 5565261 R KEGG: sen:SACE_6458 hypothetical protein; hypothetical protein complement(5564155..5565261) Pseudonocardia dioxanivorans CB1190 10367050 YP_004335190.1 CDS Psed_5200 NC_015312.1 5565248 5565463 R PFAM: Uncharacterised protein family UPF0434/Trm112; KEGG: amd:AMED_8014 hypothetical protein; hypothetical protein complement(5565248..5565463) Pseudonocardia dioxanivorans CB1190 10367051 YP_004335191.1 CDS Psed_5201 NC_015312.1 5565638 5566993 R PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: ami:Amir_6327 phosphomannomutase/phosphoglucomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II complement(5565638..5566993) Pseudonocardia dioxanivorans CB1190 10367052 YP_004335192.1 CDS Psed_5202 NC_015312.1 5567077 5567439 R manually curated; KEGG: svi:Svir_31030 hypothetical protein; hypothetical protein complement(5567077..5567439) Pseudonocardia dioxanivorans CB1190 10367053 YP_004335193.1 CDS Psed_5203 NC_015312.1 5567528 5568007 D manually curated; KEGG: svi:Svir_31040 hypothetical protein; hypothetical protein 5567528..5568007 Pseudonocardia dioxanivorans CB1190 10367054 YP_004335194.1 CDS Psed_5204 NC_015312.1 5568332 5568667 R PFAM: Transcription factor WhiB; KEGG: nml:Namu_4172 transcription factor WhiB; transcription factor WhiB complement(5568332..5568667) Pseudonocardia dioxanivorans CB1190 10367055 YP_004335195.1 CDS Psed_5205 NC_015312.1 5568825 5569577 D PFAM: Peptidase M50; KEGG: sen:SACE_6465 peptidase M50; peptidase M50 5568825..5569577 Pseudonocardia dioxanivorans CB1190 10367056 YP_004335196.1 CDS Psed_5206 NC_015312.1 5569550 5570110 R PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_6335 NUDIX hydrolase; NUDIX hydrolase complement(5569550..5570110) Pseudonocardia dioxanivorans CB1190 10367057 YP_004335197.1 CDS Psed_5207 NC_015312.1 5570104 5571468 R TIGRFAM: F420-0:gamma-glutamyl ligase; Coenzyme F420 biosynthesis protein FbiB, C-terminal; HAMAP: F420-0:gamma-glutamyl ligase; KEGG: nfa:nfa46200 F420-0--gamma-glutamyl ligase; PFAM: F420-0 gamma-glutamyl ligase-related; Nitroreductase-like; F420-0:gamma-glutamyl ligase complement(5570104..5571468) Pseudonocardia dioxanivorans CB1190 10367058 YP_004335198.1 CDS Psed_5208 NC_015312.1 5571461 5572468 R TIGRFAM: LPPG:Fo 2-phospho-L-lactate transferase; HAMAP: LPPG:FO 2-phospho-L-lactate transferase; KEGG: sen:SACE_6466 LPPG:FO 2-phospho-L-lactate transferase; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; LPPG:FO 2-phospho-L-lactate transferase complement(5571461..5572468) Pseudonocardia dioxanivorans CB1190 10367059 YP_004335199.1 CDS Psed_5209 NC_015312.1 5572524 5573051 R KEGG: tpr:Tpau_3617 peroxiredoxin; PFAM: Glutathione peroxidase; peroxiredoxin complement(5572524..5573051) Pseudonocardia dioxanivorans CB1190 10367060 YP_004335200.1 CDS Psed_5210 NC_015312.1 5573128 5574045 R KEGG: svi:Svir_06190 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; 3-methyl-adenine DNA glycosylase complement(5573128..5574045) Pseudonocardia dioxanivorans CB1190 10367061 YP_004335201.1 CDS Psed_5211 NC_015312.1 5574049 5575167 R KEGG: tpr:Tpau_1064 nucleotidyl transferase; PFAM: Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase complement(5574049..5575167) Pseudonocardia dioxanivorans CB1190 10367062 YP_004335202.1 CDS Psed_5212 NC_015312.1 5575164 5575919 R KEGG: svi:Svir_06160 predicted glycosyltransferase; glycosyltransferase complement(5575164..5575919) Pseudonocardia dioxanivorans CB1190 10367063 YP_004335203.1 CDS Psed_5213 NC_015312.1 5576309 5577958 R KEGG: nda:Ndas_2630 Sel1 domain protein repeat-containing protein; hypothetical protein complement(5576309..5577958) Pseudonocardia dioxanivorans CB1190 10367064 YP_004335204.1 CDS Psed_5214 NC_015312.1 5578042 5578947 R PFAM: Glycosyl transferase, family 2; KEGG: tcu:Tcur_0625 glycosyl transferase 2 protein; family 2 glycosyl transferase complement(5578042..5578947) Pseudonocardia dioxanivorans CB1190 10367065 YP_004335205.1 CDS Psed_5215 NC_015312.1 5579078 5580703 D KEGG: amd:AMED_7688 LytR family transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 5579078..5580703 Pseudonocardia dioxanivorans CB1190 10367066 YP_004335206.1 CDS Psed_5216 NC_015312.1 5580732 5581448 D TIGRFAM: Conserved hypothetical protein CHP03089; KEGG: mgi:Mflv_4738 hypothetical protein; hypothetical protein 5580732..5581448 Pseudonocardia dioxanivorans CB1190 10367067 YP_004335207.1 CDS Psed_5217 NC_015312.1 5581522 5582757 D KEGG: sen:SACE_4356 threonine dehydratase; TIGRFAM: Threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase 5581522..5582757 Pseudonocardia dioxanivorans CB1190 10367068 YP_004335208.1 CDS Psed_5218 NC_015312.1 5582798 5583673 R PFAM: Ribonuclease BN-related; KEGG: cwo:Cwoe_0752 ribonuclease BN; ribonuclease BN complement(5582798..5583673) Pseudonocardia dioxanivorans CB1190 10367069 YP_004335209.1 CDS Psed_5219 NC_015312.1 5583673 5584842 R PFAM: Uncharacterised protein family UPF0118; KEGG: rha:RHA1_ro04285 hypothetical protein; hypothetical protein complement(5583673..5584842) Pseudonocardia dioxanivorans CB1190 10367070 YP_004335210.1 CDS Psed_5221 NC_015312.1 5585339 5586814 D KEGG: sco:SCO5332 hypothetical protein; hypothetical protein 5585339..5586814 Pseudonocardia dioxanivorans CB1190 10367072 YP_004335211.1 CDS Psed_5222 NC_015312.1 5587250 5587957 R PFAM: Creatininase; KEGG: aau:AAur_pTC10048 creatinine amidohydrolase; creatininase complement(5587250..5587957) Pseudonocardia dioxanivorans CB1190 10367073 YP_004335212.1 CDS Psed_5223 NC_015312.1 5587978 5589135 R KEGG: aau:AAur_pTC10047 sporulation-associated protein; sporulation-associated protein complement(5587978..5589135) Pseudonocardia dioxanivorans CB1190 10367074 YP_004335213.1 CDS Psed_5224 NC_015312.1 5589338 5589664 D KEGG: mau:Micau_5351 hypothetical protein; hypothetical protein 5589338..5589664 Pseudonocardia dioxanivorans CB1190 10367075 YP_004335214.1 CDS Psed_5225 NC_015312.1 5589680 5590006 D hypothetical protein 5589680..5590006 Pseudonocardia dioxanivorans CB1190 10367076 YP_004335215.1 CDS Psed_5226 NC_015312.1 5590184 5590927 D KEGG: kfl:Kfla_2083 hypothetical protein; hypothetical protein 5590184..5590927 Pseudonocardia dioxanivorans CB1190 10367077 YP_004335216.1 CDS Psed_5227 NC_015312.1 5590971 5591810 D PFAM: Cell divisionFtsK/SpoIIIE; KEGG: mau:Micau_5353 cell division protein FtsK/SpoIIIE; DNA translocase FtsK 5590971..5591810 Pseudonocardia dioxanivorans CB1190 10367078 YP_004335217.1 CDS Psed_5228 NC_015312.1 5591879 5592064 D hypothetical protein 5591879..5592064 Pseudonocardia dioxanivorans CB1190 10367079 YP_004335218.1 CDS Psed_5229 NC_015312.1 5592061 5592402 D KEGG: mau:Micau_5356 hypothetical protein; hypothetical protein 5592061..5592402 Pseudonocardia dioxanivorans CB1190 10367080 YP_004335219.1 CDS Psed_5230 NC_015312.1 5592399 5592767 D hypothetical protein 5592399..5592767 Pseudonocardia dioxanivorans CB1190 10367081 YP_004335220.1 CDS Psed_5231 NC_015312.1 5592848 5593192 D hypothetical protein 5592848..5593192 Pseudonocardia dioxanivorans CB1190 10367082 YP_004335221.1 CDS Psed_5232 NC_015312.1 5593189 5594709 D KEGG: kfl:Kfla_2092 hypothetical protein; hypothetical protein 5593189..5594709 Pseudonocardia dioxanivorans CB1190 10367083 YP_004335222.1 CDS Psed_5233 NC_015312.1 5594738 5594917 D KEGG: saq:Sare_3570 excisionase/Xis, DNA-binding; excisionase 5594738..5594917 Pseudonocardia dioxanivorans CB1190 10367084 YP_004335223.1 CDS Psed_5234 NC_015312.1 5594921 5596147 D PFAM: Integrase, catalytic core, phage; KEGG: ami:Amir_6364 integrase protein; integrase protein 5594921..5596147 Pseudonocardia dioxanivorans CB1190 10367085 YP_004335224.1 CDS Psed_5235 NC_015312.1 5596195 5597346 R KEGG: sen:SACE_3580 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase complement(5596195..5597346) Pseudonocardia dioxanivorans CB1190 10367086 YP_004335225.1 CDS Psed_5236 NC_015312.1 5597392 5598159 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_3581 TetR family transcriptional regulator; TetR family transcriptional regulator 5597392..5598159 Pseudonocardia dioxanivorans CB1190 10367087 YP_004335226.1 CDS Psed_5237 NC_015312.1 5598190 5598765 D PFAM: Protein of unknown function DUF1801; KEGG: sti:Sthe_1180 hypothetical protein; hypothetical protein 5598190..5598765 Pseudonocardia dioxanivorans CB1190 10367088 YP_004335227.1 CDS Psed_5238 NC_015312.1 5598928 5599434 R TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: svi:Svir_06040 phosphoribosylaminoimidazole carboxylase, PurE protein; PFAM: Phosphoribosylaminoimidazole carboxylase, core; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(5598928..5599434) Pseudonocardia dioxanivorans CB1190 10367089 YP_004335228.1 CDS Psed_5239 NC_015312.1 5599431 5600636 R TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ami:Amir_6368 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(5599431..5600636) Pseudonocardia dioxanivorans CB1190 10367090 YP_004335229.1 CDS Psed_5240 NC_015312.1 5600941 5601456 D PFAM: GtrA-like protein; KEGG: sen:SACE_6489 hypothetical protein; GtrA family protein 5600941..5601456 Pseudonocardia dioxanivorans CB1190 10367091 YP_004335230.1 CDS Psed_5241 NC_015312.1 5601517 5602788 R KEGG: sen:SACE_6490 sensor kinase, two-component system; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase complement(5601517..5602788) Pseudonocardia dioxanivorans CB1190 10367092 YP_004335231.1 CDS Psed_5242 NC_015312.1 5602806 5603462 R KEGG: ami:Amir_6380 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(5602806..5603462) Pseudonocardia dioxanivorans CB1190 10367093 YP_004335232.1 CDS Psed_5243 NC_015312.1 5603545 5604324 D KEGG: svi:Svir_05970 histidinol-phosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase, , inositol monophosphatase; PFAM: Inositol monophosphatase; histidinol-phosphate phosphatase 5603545..5604324 Pseudonocardia dioxanivorans CB1190 10367094 YP_004335233.1 CDS Psed_5244 NC_015312.1 5604377 5604823 D PFAM: MaoC-like dehydratase; KEGG: sen:SACE_6497 MaoC-like dehydratase; acyl dehydratase MaoC 5604377..5604823 Pseudonocardia dioxanivorans CB1190 10367095 YP_004335234.1 CDS Psed_5245 NC_015312.1 5605195 5605845 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mab:MAB_3312 TetR family transcriptional regulator; TetR family transcriptional regulator complement(5605195..5605845) Pseudonocardia dioxanivorans CB1190 10367096 YP_004335235.1 CDS Psed_5246 NC_015312.1 5605963 5606511 D KEGG: mab:MAB_3311c hypothetical protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein 5605963..5606511 Pseudonocardia dioxanivorans CB1190 10367097 YP_004335236.1 CDS Psed_5247 NC_015312.1 5606608 5607432 D KEGG: fri:FraEuI1c_4053 hypothetical protein; hypothetical protein 5606608..5607432 Pseudonocardia dioxanivorans CB1190 10367098 YP_004335237.1 CDS Psed_5248 NC_015312.1 5607489 5608136 D PFAM: Nitroreductase-like; KEGG: mab:MAB_3310c oxygen-insensitive NAD(P)H nitroreductase; nitroreductase 5607489..5608136 Pseudonocardia dioxanivorans CB1190 10367099 YP_004335238.1 CDS Psed_5249 NC_015312.1 5608181 5609098 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: fra:Francci3_2731 alcohol dehydrogenase GroES-like protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 5608181..5609098 Pseudonocardia dioxanivorans CB1190 10367100 YP_004335239.1 CDS Psed_5250 NC_015312.1 5609173 5609991 D PFAM: Major facilitator superfamily MFS-1; KEGG: fri:FraEuI1c_5524 major facilitator superfamily MFS_1; major facilitator superfamily protein 5609173..5609991 Pseudonocardia dioxanivorans CB1190 10367101 YP_004335240.1 CDS Psed_5251 NC_015312.1 5610028 5610681 R PFAM: Protein of unknown function DUF1470; KEGG: amd:AMED_3547 hypothetical protein; hypothetical protein complement(5610028..5610681) Pseudonocardia dioxanivorans CB1190 10367102 YP_004335241.1 CDS Psed_5254 NC_015312.1 5611310 5611756 D KEGG: hha:Hhal_2401 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 5611310..5611756 Pseudonocardia dioxanivorans CB1190 10367105 YP_004335242.1 CDS Psed_5255 NC_015312.1 5611828 5613165 D KEGG: xau:Xaut_2682 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase 5611828..5613165 Pseudonocardia dioxanivorans CB1190 10367106 YP_004335243.1 CDS Psed_5256 NC_015312.1 5613209 5614615 D KEGG: gob:Gobs_2448 LytTr DNA-binding region; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; LytTr DNA-binding protein 5613209..5614615 Pseudonocardia dioxanivorans CB1190 10367107 YP_004335244.1 CDS Psed_5257 NC_015312.1 5614831 5616162 D KEGG: xau:Xaut_2680 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; acyl-CoA dehydrogenase 5614831..5616162 Pseudonocardia dioxanivorans CB1190 10367108 YP_004335245.1 CDS Psed_5258 NC_015312.1 5616255 5617190 R KEGG: svi:Svir_05920 hydroxymethylglutaryl-CoA lyase; PFAM: Pyruvate carboxyltransferase; Hydroxymethylglutaryl-CoA lyase complement(5616255..5617190) Pseudonocardia dioxanivorans CB1190 10367109 YP_004335246.1 CDS Psed_5259 NC_015312.1 5617187 5617762 R PFAM: Domain of unknown function DUF304l; KEGG: sen:SACE_6500 membrane-flanked domain-containing protein; hypothetical protein complement(5617187..5617762) Pseudonocardia dioxanivorans CB1190 10367110 YP_004335247.1 CDS Psed_5260 NC_015312.1 5617774 5618613 R KEGG: mil:ML5_1093 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal; biotin-(acetyl-CoA carboxylase) ligase complement(5617774..5618613) Pseudonocardia dioxanivorans CB1190 10367111 YP_004335248.1 CDS Psed_5261 NC_015312.1 5618792 5620453 D KEGG: svi:Svir_05890 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase; propionyl-CoA carboxylase 5618792..5620453 Pseudonocardia dioxanivorans CB1190 10367112 YP_004335249.1 CDS Psed_5262 NC_015312.1 5620465 5620707 D KEGG: tcu:Tcur_4131 hypothetical protein; hypothetical protein 5620465..5620707 Pseudonocardia dioxanivorans CB1190 10367113 YP_004335250.1 CDS Psed_5263 NC_015312.1 5620943 5621572 D TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: sen:SACE_6507 Maf-like protein; PFAM: Maf-like protein; Septum formation protein Maf 5620943..5621572 Pseudonocardia dioxanivorans CB1190 10367114 YP_004335251.1 CDS Psed_5264 NC_015312.1 5621616 5622518 D PFAM: Rhodanese-like; KEGG: kra:Krad_3079 rhodanese domain protein; SMART: Rhodanese-like; thiosulfate sulfurtransferase 5621616..5622518 Pseudonocardia dioxanivorans CB1190 10367115 YP_004335252.1 CDS Psed_5265 NC_015312.1 5622511 5622957 D PFAM: Fe-S metabolism associated SufE; KEGG: gbr:Gbro_1834 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 5622511..5622957 Pseudonocardia dioxanivorans CB1190 10367116 YP_004335253.1 CDS Psed_5266 NC_015312.1 5623065 5624018 D KEGG: mau:Micau_4297 hypothetical protein; hypothetical protein 5623065..5624018 Pseudonocardia dioxanivorans CB1190 10367117 YP_004335254.1 CDS Psed_5267 NC_015312.1 5623972 5624937 D PFAM: Uncharacterised protein family UPF0276; KEGG: mau:Micau_4298 hypothetical protein; hypothetical protein 5623972..5624937 Pseudonocardia dioxanivorans CB1190 10367118 YP_004335255.1 CDS Psed_5268 NC_015312.1 5624934 5625380 D KEGG: mau:Micau_4299 hypothetical protein; hypothetical protein 5624934..5625380 Pseudonocardia dioxanivorans CB1190 10367119 YP_004335256.1 CDS Psed_5269 NC_015312.1 5625552 5627321 D PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: mjl:Mjls_1325 carbamoyl-phosphate synthase L chain, ATP-binding; SMART: Biotin carboxylase, C-terminal; biotin carboxylase 5625552..5627321 Pseudonocardia dioxanivorans CB1190 10367120 YP_004335257.1 CDS Psed_5270 NC_015312.1 5627513 5627764 D hypothetical protein 5627513..5627764 Pseudonocardia dioxanivorans CB1190 10367121 YP_004335258.1 CDS Psed_5271 NC_015312.1 5627994 5628470 D KEGG: bpr:GBP346_A4009 exonuclease; hypothetical protein 5627994..5628470 Pseudonocardia dioxanivorans CB1190 10367122 YP_004335259.1 CDS Psed_5272 NC_015312.1 5628530 5628898 R hypothetical protein complement(5628530..5628898) Pseudonocardia dioxanivorans CB1190 10367123 YP_004335260.1 CDS Psed_5273 NC_015312.1 5628987 5630390 R KEGG: ami:Amir_6404 flavoprotein disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase complement(5628987..5630390) Pseudonocardia dioxanivorans CB1190 10367124 YP_004335261.1 CDS Psed_5274 NC_015312.1 5630514 5630963 D PFAM: AIG2-like; KEGG: sen:SACE_6527 hypothetical protein; AIG2 family protein 5630514..5630963 Pseudonocardia dioxanivorans CB1190 10367125 YP_004335262.1 CDS Psed_5275 NC_015312.1 5631064 5632815 R KEGG: ami:Amir_6396 carbamoyl-phosphate synthase L chain ATP-binding; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; SMART: Biotin carboxylase, C-terminal; carbamoyl-phosphate synthase L chain ATP-binding protein complement(5631064..5632815) Pseudonocardia dioxanivorans CB1190 10367126 YP_004335263.1 CDS Psed_5276 NC_015312.1 5632812 5633612 R KEGG: ddr:Deide_10010 citrate (pro-3S)-lyase beta chain (citrase); PFAM: Aldehyde-lyase domain; citryl-CoA lyase complement(5632812..5633612) Pseudonocardia dioxanivorans CB1190 10367127 YP_004335264.1 CDS Psed_5277 NC_015312.1 5633609 5635135 R KEGG: afo:Afer_1346 propionyl-CoA carboxylase; PFAM: Carboxyl transferase; propionyl-CoA carboxylase complement(5633609..5635135) Pseudonocardia dioxanivorans CB1190 10367128 YP_004335265.1 CDS Psed_5278 NC_015312.1 5635132 5635593 R PFAM: MaoC-like dehydratase; KEGG: dge:Dgeo_1254 MaoC-like protein dehydratase; acyl dehydratase MaoC complement(5635132..5635593) Pseudonocardia dioxanivorans CB1190 10367129 YP_004335266.1 CDS Psed_5279 NC_015312.1 5635633 5636418 R PFAM: Crotonase, core; KEGG: bpt:Bpet1119 enoyl-CoA hydratase; enoyl-CoA hydratase complement(5635633..5636418) Pseudonocardia dioxanivorans CB1190 10367130 YP_004335267.1 CDS Psed_5280 NC_015312.1 5636415 5638025 R KEGG: bxe:Bxe_A2757 crotonobetaine/carnitine-CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(5636415..5638025) Pseudonocardia dioxanivorans CB1190 10367131 YP_004335268.1 CDS Psed_5281 NC_015312.1 5638031 5638474 R PFAM: MaoC-like dehydratase; KEGG: bts:Btus_1731 MaoC domain protein dehydratase; acyl dehydratase MaoC complement(5638031..5638474) Pseudonocardia dioxanivorans CB1190 10367132 YP_004335269.1 CDS Psed_5282 NC_015312.1 5638482 5639825 R PFAM: Major facilitator superfamily MFS-1; KEGG: nfa:nfa24070 transporter; major facilitator superfamily protein complement(5638482..5639825) Pseudonocardia dioxanivorans CB1190 10367133 YP_004335270.1 CDS Psed_5283 NC_015312.1 5640031 5640639 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1887 TetR family transcriptional regulator; TetR family transcriptional regulator 5640031..5640639 Pseudonocardia dioxanivorans CB1190 10367134 YP_004335271.1 CDS Psed_5284 NC_015312.1 5640879 5641697 D PFAM: Alpha/beta hydrolase fold-1; KEGG: hje:HacjB3_06555 arylesterase, non-heme chloride peroxidase; alpha/beta hydrolase 5640879..5641697 Pseudonocardia dioxanivorans CB1190 10367135 YP_004335272.1 CDS Psed_5285 NC_015312.1 5641777 5643024 R TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: ami:Amir_6414 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase complement(5641777..5643024) Pseudonocardia dioxanivorans CB1190 10367136 YP_004335273.1 CDS Psed_5286 NC_015312.1 5643444 5645252 D KEGG: amd:AMED_0912 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 5643444..5645252 Pseudonocardia dioxanivorans CB1190 10367137 YP_004335274.1 CDS Psed_5287 NC_015312.1 5645288 5646094 D TIGRFAM: purine nucleotide phosphorylase; Inosine guanosine/xanthosine phosphorylase; KEGG: ami:Amir_6421 purine nucleotide phosphorylase; PFAM: Nucleoside phosphorylase domain; purine nucleotide phosphorylase 5645288..5646094 Pseudonocardia dioxanivorans CB1190 10367138 YP_004335275.1 CDS Psed_5288 NC_015312.1 5646091 5647683 D PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; KEGG: ami:Amir_6422 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 5646091..5647683 Pseudonocardia dioxanivorans CB1190 10367139 YP_004335276.1 CDS Psed_5289 NC_015312.1 5647693 5648424 R PFAM: Lipase, GDSL; KEGG: cfl:Cfla_0383 ricin B lectin; G-D-S-L family lipolytic protein complement(5647693..5648424) Pseudonocardia dioxanivorans CB1190 10367140 YP_004335277.1 CDS Psed_5290 NC_015312.1 5648606 5649196 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_6428 transcriptional regulator, TetR family; TetR family transcriptional regulator 5648606..5649196 Pseudonocardia dioxanivorans CB1190 10367141 YP_004335278.1 CDS Psed_5291 NC_015312.1 5649209 5649832 R KEGG: mjl:Mjls_1267 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; uracil phosphoribosyltransferase complement(5649209..5649832) Pseudonocardia dioxanivorans CB1190 10367142 YP_004335279.1 CDS Psed_5292 NC_015312.1 5649844 5650773 R KEGG: svi:Svir_01260 haloalkane dehalogenase; PFAM: Alpha/beta hydrolase fold-1; Haloalkane dehalogenase complement(5649844..5650773) Pseudonocardia dioxanivorans CB1190 10367143 YP_004335280.1 CDS Psed_5293 NC_015312.1 5651160 5651396 D hypothetical protein 5651160..5651396 Pseudonocardia dioxanivorans CB1190 10367144 YP_004335281.1 CDS Psed_5294 NC_015312.1 5651706 5652647 D KEGG: bcv:Bcav_0227 hypothetical protein; hypothetical protein 5651706..5652647 Pseudonocardia dioxanivorans CB1190 10367145 YP_004335282.1 CDS Psed_5295 NC_015312.1 5652701 5654023 D KEGG: svi:Svir_05470 hypothetical protein; hypothetical protein 5652701..5654023 Pseudonocardia dioxanivorans CB1190 10367146 YP_004335283.1 CDS Psed_5296 NC_015312.1 5654054 5655208 R PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: sna:Snas_1362 adenosine deaminase; adenosine deaminase complement(5654054..5655208) Pseudonocardia dioxanivorans CB1190 10367147 YP_004335284.1 CDS Psed_5297 NC_015312.1 5655291 5656367 D KEGG: ami:Amir_6447 hypothetical protein; hypothetical protein 5655291..5656367 Pseudonocardia dioxanivorans CB1190 10367148 YP_004335285.1 CDS Psed_5298 NC_015312.1 5656616 5658637 R KEGG: amd:AMED_2893 MviN-like protein; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN complement(5656616..5658637) Pseudonocardia dioxanivorans CB1190 10367149 YP_004335286.1 CDS Psed_5299 NC_015312.1 5660082 5660567 D PFAM: Polyketide cyclase/dehydrase; KEGG: rop:ROP_38140 hypothetical protein; polyketide cyclase/dehydrase 5660082..5660567 Pseudonocardia dioxanivorans CB1190 10367150 YP_004335287.1 CDS Psed_5300 NC_015312.1 5660610 5661845 D KEGG: rer:RER_20120 D-alanyl-D-alanine carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; serine-type D-Ala-D-Ala carboxypeptidase 5660610..5661845 Pseudonocardia dioxanivorans CB1190 10367151 YP_004335288.1 CDS Psed_5301 NC_015312.1 5661852 5662919 R KEGG: ami:Amir_6469 ribonuclease; TIGRFAM: Conserved hypothetical protein CHP00766, YhjD; Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease complement(5661852..5662919) Pseudonocardia dioxanivorans CB1190 10367152 YP_004335289.1 CDS Psed_5302 NC_015312.1 5662930 5663955 R TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: req:REQ_34370 tryptophan-tRNA synthetase trps; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase complement(5662930..5663955) Pseudonocardia dioxanivorans CB1190 10367153 YP_004335290.1 CDS Psed_5303 NC_015312.1 5664058 5665509 D KEGG: sro:Sros_1535 9-cis-epoxycarotenoid dioxygenase; PFAM: Carotenoid oxygenase; 9-cis-epoxycarotenoid dioxygenase 5664058..5665509 Pseudonocardia dioxanivorans CB1190 10367154 YP_004335291.1 CDS Psed_5304 NC_015312.1 5665550 5667181 D KEGG: sro:Sros_1545 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5665550..5667181 Pseudonocardia dioxanivorans CB1190 10367155 YP_004335292.1 CDS Psed_5305 NC_015312.1 5667178 5668140 D KEGG: sro:Sros_1533 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; TIGRFAM: F420-dependent oxidoreductase, Rv3093c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase 5667178..5668140 Pseudonocardia dioxanivorans CB1190 10367156 YP_004335293.1 CDS Psed_5306 NC_015312.1 5668214 5668408 R hypothetical protein complement(5668214..5668408) Pseudonocardia dioxanivorans CB1190 10367157 YP_004335294.1 CDS Psed_5307 NC_015312.1 5668462 5671062 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: FO synthase, subunit 1; Complex F420, CofH; FO synthase, subunit 2; KEGG: sen:SACE_6594 FO synthase; HAMAP: FO synthase subunit 2; FO synthase, subunit 1; PFAM: Radical SAM; FO synthase subunit 2 complement(5668462..5671062) Pseudonocardia dioxanivorans CB1190 10367158 YP_004335295.1 CDS Psed_5308 NC_015312.1 5671428 5671931 R PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: mil:ML5_3805 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase complement(5671428..5671931) Pseudonocardia dioxanivorans CB1190 10367159 YP_004335296.1 CDS Psed_5309 NC_015312.1 5671949 5673370 R PFAM: Serine/threonine-protein kinase-like domain; KEGG: sen:SACE_5901 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase complement(5671949..5673370) Pseudonocardia dioxanivorans CB1190 10367160 YP_004335297.1 CDS Psed_5310 NC_015312.1 5673367 5674173 R TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: ami:Amir_6475 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(5673367..5674173) Pseudonocardia dioxanivorans CB1190 10367161 YP_004335298.1 CDS Psed_5311 NC_015312.1 5674217 5674558 R KEGG: ami:Amir_6477 hypothetical protein; hypothetical protein complement(5674217..5674558) Pseudonocardia dioxanivorans CB1190 10367162 YP_004335299.1 CDS Psed_5312 NC_015312.1 5674702 5675916 R KEGG: gob:Gobs_4413 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, eukaryotic; PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase complement(5674702..5675916) Pseudonocardia dioxanivorans CB1190 10367163 YP_004335300.1 CDS Psed_5313 NC_015312.1 5676016 5676312 R KEGG: ami:Amir_6499 hypothetical protein; hypothetical protein complement(5676016..5676312) Pseudonocardia dioxanivorans CB1190 10367164 YP_004335301.1 CDS Psed_5314 NC_015312.1 5676321 5677187 R HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: sen:SACE_6651 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD complement(5676321..5677187) Pseudonocardia dioxanivorans CB1190 10367165 YP_004335302.1 CDS Psed_5315 NC_015312.1 5677364 5677981 R PFAM: Pentapeptide repeat; KEGG: sen:SACE_6655 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein complement(5677364..5677981) Pseudonocardia dioxanivorans CB1190 10367166 YP_004335303.1 CDS Psed_5316 NC_015312.1 5678208 5678849 D KEGG: fra:Francci3_1993 hypothetical protein; hypothetical protein 5678208..5678849 Pseudonocardia dioxanivorans CB1190 10367167 YP_004335304.1 CDS Psed_5317 NC_015312.1 5678936 5682364 R KEGG: sen:SACE_6660 error-prone DNA polymerase; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: DNA polymerase III, alpha subunit; HAMAP: DNA polymerase, error-prone; SMART: Polymerase/histidinol phosphatase, N-terminal; error-prone DNA polymerase complement(5678936..5682364) Pseudonocardia dioxanivorans CB1190 10367168 YP_004335305.1 CDS Psed_5318 NC_015312.1 5682417 5683895 R KEGG: amd:AMED_4174 major facilitator transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter complement(5682417..5683895) Pseudonocardia dioxanivorans CB1190 10367169 YP_004335306.1 CDS Psed_5319 NC_015312.1 5684056 5684637 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bte:BTH_I2940 TetR family transcriptional regulator; TetR family transcriptional regulator 5684056..5684637 Pseudonocardia dioxanivorans CB1190 10367170 YP_004335307.1 CDS Psed_5320 NC_015312.1 5684657 5685007 R KEGG: fri:FraEuI1c_4664 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(5684657..5685007) Pseudonocardia dioxanivorans CB1190 10367171 YP_004335308.1 CDS Psed_5321 NC_015312.1 5685091 5685471 R KEGG: sma:SAV_2809 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(5685091..5685471) Pseudonocardia dioxanivorans CB1190 10367172 YP_004335309.1 CDS Psed_5322 NC_015312.1 5685553 5686800 R KEGG: fal:FRAAL4104 FMN-dependent lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase; (S)-2-hydroxy-acid oxidase complement(5685553..5686800) Pseudonocardia dioxanivorans CB1190 10367173 YP_004335310.1 CDS Psed_5323 NC_015312.1 5686891 5689098 R KEGG: sen:SACE_6661 DNA-directed DNA polymerase; hypothetical protein complement(5686891..5689098) Pseudonocardia dioxanivorans CB1190 10367174 YP_004335311.1 CDS Psed_5324 NC_015312.1 5689095 5689859 R KEGG: amd:AMED_0812 hypothetical protein; hypothetical protein complement(5689095..5689859) Pseudonocardia dioxanivorans CB1190 10367175 YP_004335312.1 CDS Psed_5325 NC_015312.1 5690062 5691225 D PFAM: Glycosyl transferase, family 2; KEGG: cfl:Cfla_0377 glycosyl transferase 2; family 2 glycosyl transferase 5690062..5691225 Pseudonocardia dioxanivorans CB1190 10367176 YP_004335313.1 CDS Psed_5326 NC_015312.1 5691230 5691412 D hypothetical protein 5691230..5691412 Pseudonocardia dioxanivorans CB1190 10367177 YP_004335314.1 CDS Psed_5327 NC_015312.1 5691441 5693000 R KEGG: ami:Amir_6503 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: AICARFT/IMPCHase bienzyme; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(5691441..5693000) Pseudonocardia dioxanivorans CB1190 10367178 YP_004335315.1 CDS Psed_5328 NC_015312.1 5692997 5693638 R TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: nfa:nfa49870 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; phosphoribosylglycinamide formyltransferase complement(5692997..5693638) Pseudonocardia dioxanivorans CB1190 10367179 YP_004335316.1 CDS Psed_5329 NC_015312.1 5693761 5695893 R KEGG: ami:Amir_6505 AAA ATPase containing von Willebrand factor type A (vWA) domain; ATPase AAA complement(5693761..5695893) Pseudonocardia dioxanivorans CB1190 10367180 YP_004335317.1 CDS Psed_5330 NC_015312.1 5695972 5696760 R KEGG: nfa:nfa49890 antigen 34 kDa family protein; antigen 34 kDa family protein complement(5695972..5696760) Pseudonocardia dioxanivorans CB1190 10367181 YP_004335318.1 CDS Psed_5331 NC_015312.1 5696877 5697764 R SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: amd:AMED_0803 succinyl-CoA synthetase alpha subunit; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha complement(5696877..5697764) Pseudonocardia dioxanivorans CB1190 10367182 YP_004335319.1 CDS Psed_5332 NC_015312.1 5697767 5698939 R PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA synthetase, beta subunit; KEGG: amd:AMED_0802 succinyl-CoA synthetase beta subunit; succinyl-CoA ligase (ADP-forming) subunit beta complement(5697767..5698939) Pseudonocardia dioxanivorans CB1190 10367183 YP_004335320.1 CDS Psed_5333 NC_015312.1 5699186 5700142 D PFAM: Alpha/beta hydrolase fold-1; KEGG: kfl:Kfla_1265 lipase class 2; alpha/beta hydrolase 5699186..5700142 Pseudonocardia dioxanivorans CB1190 10367184 YP_004335321.1 CDS Psed_5334 NC_015312.1 5700510 5701262 D PFAM: Peptidase M23; KEGG: rop:ROP_pROB01-02760 peptidase M23 family protein; peptidase M23 5700510..5701262 Pseudonocardia dioxanivorans CB1190 10367185 YP_004335322.1 CDS Psed_5335 NC_015312.1 5701287 5703689 R KEGG: sen:SACE_6681 ATP-dependent DNA helicase; TIGRFAM: DNA helicase, ATP-dependent, PcrA type; PFAM: DNA helicase, UvrD/REP type; ATP-dependent DNA helicase PcrA complement(5701287..5703689) Pseudonocardia dioxanivorans CB1190 10367186 YP_004335323.1 CDS Psed_5336 NC_015312.1 5703909 5704193 D TIGRFAM: Chorismate mutase, high GC Gram-positive bacteria/archaeal; PFAM: Chorismate mutase, type II; KEGG: sen:SACE_6683 chorismate mutase; SMART: Chorismate mutase; chorismate mutase 5703909..5704193 Pseudonocardia dioxanivorans CB1190 10367187 YP_004335324.1 CDS Psed_5337 NC_015312.1 5704251 5704574 D KEGG: amd:AMED_0795 hypothetical protein; hypothetical protein 5704251..5704574 Pseudonocardia dioxanivorans CB1190 10367188 YP_004335325.1 CDS Psed_5338 NC_015312.1 5705202 5706365 D KEGG: rci:RRC34 hypothetical protein; hypothetical protein 5705202..5706365 Pseudonocardia dioxanivorans CB1190 10367189 YP_004335326.1 CDS Psed_5339 NC_015312.1 5706833 5708479 D PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit 5706833..5708479 Pseudonocardia dioxanivorans CB1190 10367190 YP_004335327.1 CDS Psed_5340 NC_015312.1 5708476 5709267 D KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 5708476..5709267 Pseudonocardia dioxanivorans CB1190 10367191 YP_004335328.1 CDS Psed_5341 NC_015312.1 5709936 5710619 R KEGG: ami:Amir_6525 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator complement(5709936..5710619) Pseudonocardia dioxanivorans CB1190 10367192 YP_004335329.1 CDS Psed_5342 NC_015312.1 5710616 5712004 R PFAM: ATPase-like, ATP-binding domain; Phage shock domain; KEGG: amd:AMED_0787 two-component system sensor kinase; signal transduction histidine kinase complement(5710616..5712004) Pseudonocardia dioxanivorans CB1190 10367193 YP_004335330.1 CDS Psed_5343 NC_015312.1 5712164 5713492 D PFAM: Phage shock domain; KEGG: sen:SACE_6696 hypothetical protein; PspC domain-containing protein 5712164..5713492 Pseudonocardia dioxanivorans CB1190 10367194 YP_004335331.1 CDS Psed_5344 NC_015312.1 5713485 5713718 D hypothetical protein 5713485..5713718 Pseudonocardia dioxanivorans CB1190 10367195 YP_004335332.1 CDS Psed_5345 NC_015312.1 5713851 5714780 R PFAM: Methylenetetrahydrofolate reductase; KEGG: adg:Adeg_0345 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase complement(5713851..5714780) Pseudonocardia dioxanivorans CB1190 10367196 YP_004335333.1 CDS Psed_5346 NC_015312.1 5714823 5716403 R PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase; KEGG: sen:SACE_6701 GMP synthase; GMP synthase complement(5714823..5716403) Pseudonocardia dioxanivorans CB1190 10367197 YP_004335334.1 CDS Psed_5347 NC_015312.1 5716615 5717073 D PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: scb:SCAB_86191 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 5716615..5717073 Pseudonocardia dioxanivorans CB1190 10367198 YP_004335335.1 CDS Psed_5348 NC_015312.1 5717126 5717506 R KEGG: mav:MAV_3971 death-on-curing protein; TIGRFAM: Death-on-curing protein; PFAM: Filamentation induced by cAMP/death on curing-related; death-on-curing family protein complement(5717126..5717506) Pseudonocardia dioxanivorans CB1190 10367199 YP_004335336.1 CDS Psed_5349 NC_015312.1 5717520 5717726 R PFAM: CopG-like DNA-binding; KEGG: fre:Franean1_5368 hypothetical protein; CopG family transcriptional regulator complement(5717520..5717726) Pseudonocardia dioxanivorans CB1190 10367200 YP_004335337.1 CDS Psed_5350 NC_015312.1 5717768 5718892 R manually curated; TIGRFAM: IMP dehydrogenase-related 2; KEGG: sen:SACE_6707 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; IMP dehydrogenase complement(5717768..5718892) Pseudonocardia dioxanivorans CB1190 10367201 YP_004335338.1 CDS Psed_5351 NC_015312.1 5718999 5720504 R SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: svi:Svir_04740 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase complement(5718999..5720504) Pseudonocardia dioxanivorans CB1190 10367202 YP_004335339.1 CDS Psed_5352 NC_015312.1 5720685 5721065 D KEGG: ami:Amir_6536 hypothetical protein; hypothetical protein 5720685..5721065 Pseudonocardia dioxanivorans CB1190 10367203 YP_004335340.1 CDS Psed_5353 NC_015312.1 5721345 5722592 R KEGG: amd:AMED_0769 hypothetical protein; hypothetical protein complement(5721345..5722592) Pseudonocardia dioxanivorans CB1190 10367204 YP_004335341.1 CDS Psed_5354 NC_015312.1 5722593 5723165 R manually curated; TIGRFAM: RNA polymerase sigma-70; KEGG: svi:Svir_04710 RNA polymerase sigma factor, sigma-70 family; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(5722593..5723165) Pseudonocardia dioxanivorans CB1190 10367205 YP_004335342.1 CDS Psed_5355 NC_015312.1 5724297 5724893 R KEGG: ami:Amir_6539 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator complement(5724297..5724893) Pseudonocardia dioxanivorans CB1190 10367206 YP_004335343.1 CDS Psed_5356 NC_015312.1 5725060 5726247 R KEGG: req:REQ_34970 hypothetical protein; hypothetical protein complement(5725060..5726247) Pseudonocardia dioxanivorans CB1190 10367207 YP_004335344.1 CDS Psed_5357 NC_015312.1 5726250 5727347 R KEGG: ami:Amir_6541 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR complement(5726250..5727347) Pseudonocardia dioxanivorans CB1190 10367208 YP_004335345.1 CDS Psed_5358 NC_015312.1 5727489 5727803 D PFAM: Transcription factor WhiB; KEGG: ami:Amir_6542 transcription factor WhiB; transcription factor WhiB 5727489..5727803 Pseudonocardia dioxanivorans CB1190 10367209 YP_004335346.1 CDS Psed_5359 NC_015312.1 5727925 5729547 R TIGRFAM: Chaperonin Cpn60; HAMAP: Chaperonin Cpn60; KEGG: ami:Amir_6543 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL complement(5727925..5729547) Pseudonocardia dioxanivorans CB1190 10367210 YP_004335347.1 CDS Psed_5360 NC_015312.1 5729667 5729957 R HAMAP: Chaperonin Cpn10; PFAM: Chaperonin Cpn10; KEGG: ami:Amir_6544 chaperonin Cpn10; SMART: Chaperonin Cpn10; molecular chaperone GroES complement(5729667..5729957) Pseudonocardia dioxanivorans CB1190 10367211 YP_004335348.1 CDS Psed_5361 NC_015312.1 5730127 5730759 D KEGG: gbr:Gbro_1246 pyrrolo-quinoline quinone beta-propeller repeat-containing protein; hypothetical protein 5730127..5730759 Pseudonocardia dioxanivorans CB1190 10367212 YP_004335349.1 CDS Psed_5362 NC_015312.1 5730781 5731713 D KEGG: sen:SACE_0624 aldo/keto reductase oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 5730781..5731713 Pseudonocardia dioxanivorans CB1190 10367213 YP_004335350.1 CDS Psed_5363 NC_015312.1 5731803 5732852 R PFAM: Peptidase M22, glycoprotease; TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; HAMAP: Peptidase M22, O-sialoglycoprotein peptidase; KEGG: svi:Svir_04650 O-sialoglycoprotein endopeptidase; O-sialoglycoprotein endopeptidase complement(5731803..5732852) Pseudonocardia dioxanivorans CB1190 10367214 YP_004335351.1 CDS Psed_5364 NC_015312.1 5732849 5733322 R KEGG: mav:MAV_4368 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; ribosomal-protein-alanine acetyltransferase complement(5732849..5733322) Pseudonocardia dioxanivorans CB1190 10367215 YP_004335352.1 CDS Psed_5365 NC_015312.1 5733319 5733993 R KEGG: ami:Amir_6548 peptidase M22 glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein complement(5733319..5733993) Pseudonocardia dioxanivorans CB1190 10367216 YP_004335353.1 CDS Psed_5366 NC_015312.1 5734017 5734727 R KEGG: nca:Noca_3196 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(5734017..5734727) Pseudonocardia dioxanivorans CB1190 10367217 YP_004335354.1 CDS Psed_5367 NC_015312.1 5734724 5735206 R KEGG: req:REQ_35300 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein complement(5734724..5735206) Pseudonocardia dioxanivorans CB1190 10367218 YP_004335355.1 CDS Psed_5368 NC_015312.1 5735203 5736327 R PFAM: Alpha/beta hydrolase fold-1; KEGG: ami:Amir_6555 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(5735203..5736327) Pseudonocardia dioxanivorans CB1190 10367219 YP_004335356.1 CDS Psed_5369 NC_015312.1 5736321 5737580 R PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: svi:Svir_04590 alanine racemase; alanine racemase complement(5736321..5737580) Pseudonocardia dioxanivorans CB1190 10367220 YP_004335357.1 CDS Psed_5370 NC_015312.1 5737911 5739353 R KEGG: amd:AMED_0737 ribokinase; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; hypothetical protein complement(5737911..5739353) Pseudonocardia dioxanivorans CB1190 10367221 YP_004335358.1 CDS Psed_5371 NC_015312.1 5739424 5740167 R KEGG: mva:Mvan_3404 hypothetical protein; hypothetical protein complement(5739424..5740167) Pseudonocardia dioxanivorans CB1190 10367222 YP_004335359.1 CDS Psed_5372 NC_015312.1 5740503 5741333 D KEGG: ami:Amir_6559 dienelactone hydrolase-like protein; dienelactone hydrolase-like protein 5740503..5741333 Pseudonocardia dioxanivorans CB1190 10367223 YP_004335360.1 CDS Psed_5373 NC_015312.1 5741343 5741699 R hypothetical protein complement(5741343..5741699) Pseudonocardia dioxanivorans CB1190 10367224 YP_004335361.1 CDS Psed_5374 NC_015312.1 5741696 5741968 R hypothetical protein complement(5741696..5741968) Pseudonocardia dioxanivorans CB1190 10367225 YP_004335362.1 CDS Psed_5375 NC_015312.1 5742043 5743380 R TIGRFAM: Phosphoglucosamine mutase; KEGG: amd:AMED_0728 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase complement(5742043..5743380) Pseudonocardia dioxanivorans CB1190 10367226 YP_004335363.1 CDS Psed_5376 NC_015312.1 5743392 5743997 R PFAM: Ribosomal protein S9; KEGG: nml:Namu_1177 30S ribosomal protein S9; 30S ribosomal protein S9 complement(5743392..5743997) Pseudonocardia dioxanivorans CB1190 10367227 YP_004335364.1 CDS Psed_5377 NC_015312.1 5743994 5744437 R KEGG: amd:AMED_0726 large subunit ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 complement(5743994..5744437) Pseudonocardia dioxanivorans CB1190 10367228 YP_004335365.1 CDS Psed_5378 NC_015312.1 5744650 5744937 R KEGG: sen:SACE_6782 hypothetical protein; hypothetical protein complement(5744650..5744937) Pseudonocardia dioxanivorans CB1190 10367229 YP_004335366.1 CDS Psed_5379 NC_015312.1 5744948 5745259 R KEGG: ami:Amir_6567 protein of unknown function DUF909; hypothetical protein complement(5744948..5745259) Pseudonocardia dioxanivorans CB1190 10367230 YP_004335367.1 CDS Psed_5380 NC_015312.1 5745340 5745849 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gob:Gobs_4039 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(5745340..5745849) Pseudonocardia dioxanivorans CB1190 10367231 YP_004335368.1 CDS Psed_5381 NC_015312.1 5745927 5747570 R KEGG: cfl:Cfla_2780 amidase; PFAM: Amidase; amidase complement(5745927..5747570) Pseudonocardia dioxanivorans CB1190 10367232 YP_004335369.1 CDS Psed_5382 NC_015312.1 5747567 5748727 R PFAM: Acetamidase/Formamidase; KEGG: cfl:Cfla_2779 acetamidase/formamidase; acetamidase/formamidase complement(5747567..5748727) Pseudonocardia dioxanivorans CB1190 10367233 YP_004335370.1 CDS Psed_5383 NC_015312.1 5749421 5750704 D KEGG: bbt:BBta_2105 N-isopropylammelide isopropylaminohydrolase; PFAM: Amidohydrolase 3; cytosine deaminase 5749421..5750704 Pseudonocardia dioxanivorans CB1190 10367234 YP_004335371.1 CDS Psed_5384 NC_015312.1 5750814 5751818 D KEGG: mpo:Mpop_4351 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; flavanone 3-dioxygenase 5750814..5751818 Pseudonocardia dioxanivorans CB1190 10367235 YP_004335372.1 CDS Psed_5385 NC_015312.1 5751686 5751946 R hypothetical protein complement(5751686..5751946) Pseudonocardia dioxanivorans CB1190 10367236 YP_004335373.1 CDS Psed_5386 NC_015312.1 5751966 5752493 D KEGG: fri:FraEuI1c_4980 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 5751966..5752493 Pseudonocardia dioxanivorans CB1190 10367237 YP_004335374.1 CDS Psed_5387 NC_015312.1 5752509 5753717 R KEGG: ami:Amir_6569 heat shock protein 70; hypothetical protein complement(5752509..5753717) Pseudonocardia dioxanivorans CB1190 10367238 YP_004335375.1 CDS Psed_5388 NC_015312.1 5753720 5757625 R PFAM: Cell divisionFtsK/SpoIIIE; KEGG: mau:Micau_5894 cell division protein FtsK/SpoIIIE; DNA translocase FtsK complement(5753720..5757625) Pseudonocardia dioxanivorans CB1190 10367239 YP_004335376.1 CDS Psed_5389 NC_015312.1 5757788 5759254 D KEGG: sro:Sros_8100 hypothetical protein; TIGRFAM: Type VII secretion system protein EccD; PFAM: Type VII secretion system protein EccD; secretion protein snm4 5757788..5759254 Pseudonocardia dioxanivorans CB1190 10367240 YP_004335377.1 CDS Psed_5390 NC_015312.1 5759251 5760426 D PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: tpr:Tpau_0863 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 5759251..5760426 Pseudonocardia dioxanivorans CB1190 10367241 YP_004335378.1 CDS Psed_5391 NC_015312.1 5760643 5762007 R PFAM: Type VII secretion system protein EccB; KEGG: gbr:Gbro_3295 hypothetical protein; hypothetical protein complement(5760643..5762007) Pseudonocardia dioxanivorans CB1190 10367242 YP_004335379.1 CDS Psed_5392 NC_015312.1 5762068 5762742 R KEGG: sco:SCO1070 two component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(5762068..5762742) Pseudonocardia dioxanivorans CB1190 10367243 YP_004335380.1 CDS Psed_5393 NC_015312.1 5762739 5764160 R KEGG: sco:SCO1071 two component system sensor kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase complement(5762739..5764160) Pseudonocardia dioxanivorans CB1190 10367244 YP_004335381.1 CDS Psed_5394 NC_015312.1 5764162 5764578 D PFAM: Protein of unknown function DUF1707; KEGG: amd:AMED_0797 hypothetical protein; hypothetical protein 5764162..5764578 Pseudonocardia dioxanivorans CB1190 10367245 YP_004335382.1 CDS Psed_5395 NC_015312.1 5764667 5765458 R PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: tpr:Tpau_3380 tRNA pseudouridine synthase A; tRNA pseudouridine synthase A complement(5764667..5765458) Pseudonocardia dioxanivorans CB1190 10367246 YP_004335383.1 CDS Psed_5396 NC_015312.1 5765527 5766264 R TIGRFAM: Ribosomal protein L17; HAMAP: Ribosomal protein L17; KEGG: tpr:Tpau_3381 ribosomal protein L17; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 complement(5765527..5766264) Pseudonocardia dioxanivorans CB1190 10367247 YP_004335384.1 CDS Psed_5397 NC_015312.1 5766267 5767310 R SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: ami:Amir_6583 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase subunit alpha complement(5766267..5767310) Pseudonocardia dioxanivorans CB1190 10367248 YP_004335385.1 CDS Psed_5398 NC_015312.1 5767413 5768018 R TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; KEGG: sen:SACE_6804 30S ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 complement(5767413..5768018) Pseudonocardia dioxanivorans CB1190 10367249 YP_004335386.1 CDS Psed_5399 NC_015312.1 5768039 5768446 R KEGG: amd:AMED_0706 small subunit ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 complement(5768039..5768446) Pseudonocardia dioxanivorans CB1190 10367250 YP_004335387.1 CDS Psed_5400 NC_015312.1 5768446 5768826 R KEGG: rop:ROP_62120 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 complement(5768446..5768826) Pseudonocardia dioxanivorans CB1190 10367251 YP_004335388.1 CDS Psed_5401 NC_015312.1 5769001 5769114 R TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: ami:Amir_6587 ribosomal protein L36; PFAM: Ribosomal protein L36; 50S ribosomal protein L36 complement(5769001..5769114) Pseudonocardia dioxanivorans CB1190 10367252 YP_004335389.1 CDS Psed_5402 NC_015312.1 5769149 5769370 R TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: amd:AMED_0702 translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type; translation initiation factor IF-1 complement(5769149..5769370) Pseudonocardia dioxanivorans CB1190 10367253 YP_004335390.1 CDS Psed_5404 NC_015312.1 5770743 5772122 R KEGG: rha:RHA1_ro01581 NAD(P) transhydrogenase beta subunit; PFAM: NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase complement(5770743..5772122) Pseudonocardia dioxanivorans CB1190 10367255 YP_004335391.1 CDS Psed_5405 NC_015312.1 5772119 5772469 R KEGG: rop:ROP_12850 nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB; nicotinamide nucleotide transhydrogenase subunit alpha 2 PntAB complement(5772119..5772469) Pseudonocardia dioxanivorans CB1190 10367256 YP_004335392.1 CDS Psed_5406 NC_015312.1 5772469 5773494 R KEGG: rop:ROP_12860 nicotinamide nucleotide transhydrogenase alpha subunit 1 PntAA; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; NAD(P)(+) transhydrogenase complement(5772469..5773494) Pseudonocardia dioxanivorans CB1190 10367257 YP_004335393.1 CDS Psed_5407 NC_015312.1 5773762 5774586 R TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: amd:AMED_0701 methionyl aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase complement(5773762..5774586) Pseudonocardia dioxanivorans CB1190 10367258 YP_004335394.1 CDS Psed_5408 NC_015312.1 5774659 5775207 R TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: rha:RHA1_ro06154 adenylate kinase; PFAM: Adenylate kinase; adenylate kinase complement(5774659..5775207) Pseudonocardia dioxanivorans CB1190 10367259 YP_004335395.1 CDS Psed_5409 NC_015312.1 5775337 5776653 R KEGG: sen:SACE_6813 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY complement(5775337..5776653) Pseudonocardia dioxanivorans CB1190 10367260 YP_004335396.1 CDS Psed_5410 NC_015312.1 5776900 5777349 R TIGRFAM: Ribosomal protein L15, bacterial-type; KEGG: req:REQ_35670 50S ribosomal protein L15 RplO; 50S ribosomal protein L15 complement(5776900..5777349) Pseudonocardia dioxanivorans CB1190 10367261 YP_004335397.1 CDS Psed_5411 NC_015312.1 5777349 5777555 R KEGG: kra:Krad_0706 ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; 50S ribosomal protein L30 complement(5777349..5777555) Pseudonocardia dioxanivorans CB1190 10367262 YP_004335398.1 CDS Psed_5412 NC_015312.1 5777561 5778196 R KEGG: sen:SACE_6819 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal; 30S ribosomal protein S5 complement(5777561..5778196) Pseudonocardia dioxanivorans CB1190 10367263 YP_004335399.1 CDS Psed_5413 NC_015312.1 5778237 5778659 R KEGG: svi:Svir_04140 LSU ribosomal protein L18P; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 complement(5778237..5778659) Pseudonocardia dioxanivorans CB1190 10367264 YP_004335400.1 CDS Psed_5414 NC_015312.1 5778659 5779198 R KEGG: ami:Amir_6599 ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 complement(5778659..5779198) Pseudonocardia dioxanivorans CB1190 10367265 YP_004335401.1 CDS Psed_5415 NC_015312.1 5779215 5779613 R PFAM: Ribosomal protein S8; KEGG: ami:Amir_6600 ribosomal protein S8; 30S ribosomal protein S8 complement(5779215..5779613) Pseudonocardia dioxanivorans CB1190 10367266 YP_004335402.1 CDS Psed_5416 NC_015312.1 5779706 5779891 R PFAM: Ribosomal protein S14; KEGG: kra:Krad_0701 ribosomal protein S14; 30S ribosomal protein S14 complement(5779706..5779891) Pseudonocardia dioxanivorans CB1190 10367267 YP_004335403.1 CDS Psed_5417 NC_015312.1 5779898 5780461 R PFAM: Ribosomal protein L5; KEGG: ami:Amir_6602 ribosomal protein L5; 50S ribosomal protein L5 complement(5779898..5780461) Pseudonocardia dioxanivorans CB1190 10367268 YP_004335404.1 CDS Psed_5418 NC_015312.1 5780463 5780789 R TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: amd:AMED_0688 large subunit ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 complement(5780463..5780789) Pseudonocardia dioxanivorans CB1190 10367269 YP_004335405.1 CDS Psed_5419 NC_015312.1 5780792 5781160 R KEGG: ami:Amir_6604 ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 complement(5780792..5781160) Pseudonocardia dioxanivorans CB1190 10367270 YP_004335406.1 CDS Psed_5420 NC_015312.1 5781157 5781420 R KEGG: req:REQ_35770 30S ribosomal protein S17 RpsQ; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 complement(5781157..5781420) Pseudonocardia dioxanivorans CB1190 10367271 YP_004335407.1 CDS Psed_5421 NC_015312.1 5781417 5781659 R KEGG: ami:Amir_6606 ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 complement(5781417..5781659) Pseudonocardia dioxanivorans CB1190 10367272 YP_004335408.1 CDS Psed_5422 NC_015312.1 5781659 5782078 R TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: nml:Namu_1130 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 complement(5781659..5782078) Pseudonocardia dioxanivorans CB1190 10367273 YP_004335409.1 CDS Psed_5423 NC_015312.1 5782082 5782897 R TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: tpr:Tpau_3429 ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 complement(5782082..5782897) Pseudonocardia dioxanivorans CB1190 10367274 YP_004335410.1 CDS Psed_5424 NC_015312.1 5782897 5783328 R KEGG: amd:AMED_0682 large subunit ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 complement(5782897..5783328) Pseudonocardia dioxanivorans CB1190 10367275 YP_004335411.1 CDS Psed_5425 NC_015312.1 5783366 5783647 R KEGG: ami:Amir_6610 ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 complement(5783366..5783647) Pseudonocardia dioxanivorans CB1190 10367276 YP_004335412.1 CDS Psed_5426 NC_015312.1 5783664 5784497 R KEGG: sen:SACE_6833 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; 50S ribosomal protein L2 complement(5783664..5784497) Pseudonocardia dioxanivorans CB1190 10367277 YP_004335413.1 CDS Psed_5427 NC_015312.1 5784514 5784813 R PFAM: Ribosomal protein L25/L23; KEGG: svi:Svir_04000 50S ribosomal protein L23; 50S ribosomal protein L25 complement(5784514..5784813) Pseudonocardia dioxanivorans CB1190 10367278 YP_004335414.1 CDS Psed_5428 NC_015312.1 5784810 5785736 R PFAM: Ribosomal protein L4/L1e; KEGG: bfa:Bfae_23800 50S ribosomal protein L4; 50S ribosomal protein L4 complement(5784810..5785736) Pseudonocardia dioxanivorans CB1190 10367279 YP_004335415.1 CDS Psed_5429 NC_015312.1 5785736 5786389 R KEGG: ami:Amir_6614 ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 complement(5785736..5786389) Pseudonocardia dioxanivorans CB1190 10367280 YP_004335416.1 CDS Psed_5430 NC_015312.1 5786403 5786708 R TIGRFAM: Ribosomal protein S10 subgroup; HAMAP: Ribosomal protein S10 subgroup; KEGG: ami:Amir_6615 30S ribosomal protein S10; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 complement(5786403..5786708) Pseudonocardia dioxanivorans CB1190 10367281 YP_004335417.1 CDS Psed_5431 NC_015312.1 5787061 5788254 R TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; KEGG: sco:SCO4662 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu complement(5787061..5788254) Pseudonocardia dioxanivorans CB1190 10367282 YP_004335418.1 CDS Psed_5432 NC_015312.1 5788397 5790496 R TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; KEGG: ami:Amir_6617 translation elongation factor G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G complement(5788397..5790496) Pseudonocardia dioxanivorans CB1190 10367283 YP_004335419.1 CDS Psed_5433 NC_015312.1 5790541 5791011 R KEGG: sen:SACE_6840 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 complement(5790541..5791011) Pseudonocardia dioxanivorans CB1190 10367284 YP_004335420.1 CDS Psed_5434 NC_015312.1 5791011 5791385 R KEGG: sen:SACE_6841 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 complement(5791011..5791385) Pseudonocardia dioxanivorans CB1190 10367285 YP_004335421.1 CDS Psed_5435 NC_015312.1 5792072 5795974 R SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: sen:SACE_6853 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase, subunit beta-prime; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; DNA-directed RNA polymerase subunit beta' complement(5792072..5795974) Pseudonocardia dioxanivorans CB1190 10367286 YP_004335422.1 CDS Psed_5436 NC_015312.1 5796017 5799544 R TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; KEGG: sen:SACE_6854 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; DNA-directed RNA polymerase subunit beta complement(5796017..5799544) Pseudonocardia dioxanivorans CB1190 10367287 YP_004335423.1 CDS Psed_5437 NC_015312.1 5800485 5802173 D KEGG: tcu:Tcur_1238 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 5800485..5802173 Pseudonocardia dioxanivorans CB1190 10367288 YP_004335424.1 CDS Psed_5438 NC_015312.1 5802257 5802649 R TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: mav:MAV_4507 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 complement(5802257..5802649) Pseudonocardia dioxanivorans CB1190 10367289 YP_004335425.1 CDS Psed_5439 NC_015312.1 5802713 5803288 R KEGG: rop:ROP_16540 50S ribosomal protein L10; HAMAP: Ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; 50S ribosomal protein L10 complement(5802713..5803288) Pseudonocardia dioxanivorans CB1190 10367290 YP_004335426.1 CDS Psed_5440 NC_015312.1 5803564 5804715 R KEGG: amd:AMED_1772 hypothetical protein; hypothetical protein complement(5803564..5804715) Pseudonocardia dioxanivorans CB1190 10367291 YP_004335427.1 CDS Psed_5441 NC_015312.1 5804774 5805355 R KEGG: sen:SACE_6857 hypothetical protein; hypothetical protein complement(5804774..5805355) Pseudonocardia dioxanivorans CB1190 10367292 YP_004335428.1 CDS Psed_5442 NC_015312.1 5805445 5806671 R KEGG: sen:SACE_6858 secreted protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein complement(5805445..5806671) Pseudonocardia dioxanivorans CB1190 10367293 YP_004335429.1 CDS Psed_5443 NC_015312.1 5806668 5807969 R KEGG: amd:AMED_1775 ABC transport system substrate-binding protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein complement(5806668..5807969) Pseudonocardia dioxanivorans CB1190 10367294 YP_004335430.1 CDS Psed_5444 NC_015312.1 5807966 5809297 R KEGG: sen:SACE_6860 MCE family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein complement(5807966..5809297) Pseudonocardia dioxanivorans CB1190 10367295 YP_004335431.1 CDS Psed_5445 NC_015312.1 5809299 5810264 R KEGG: svi:Svir_03740 virulence factor Mce family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein complement(5809299..5810264) Pseudonocardia dioxanivorans CB1190 10367296 YP_004335432.1 CDS Psed_5446 NC_015312.1 5810261 5811415 R KEGG: amd:AMED_0605 ABC transport system substrate-binding protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein complement(5810261..5811415) Pseudonocardia dioxanivorans CB1190 10367297 YP_004335433.1 CDS Psed_5447 NC_015312.1 5811412 5812788 R KEGG: sen:SACE_6863 Mce family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry-related; virulence factor Mce family protein complement(5811412..5812788) Pseudonocardia dioxanivorans CB1190 10367298 YP_004335434.1 CDS Psed_5448 NC_015312.1 5812785 5813627 R PFAM: Domain of unknown function DUF140; KEGG: req:REQ_36790 integral membrane protein yrbe4b; hypothetical protein complement(5812785..5813627) Pseudonocardia dioxanivorans CB1190 10367299 YP_004335435.1 CDS Psed_5449 NC_015312.1 5813629 5814408 R PFAM: Domain of unknown function DUF140; KEGG: amd:AMED_1781 ABC transport system permease; hypothetical protein complement(5813629..5814408) Pseudonocardia dioxanivorans CB1190 10367300 YP_004335436.1 CDS Psed_5450 NC_015312.1 5814405 5815472 R PFAM: ABC transporter-like; KEGG: svi:Svir_03690 ABC-type transport system involved in resistance to organic solvents, ATPase component; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase complement(5814405..5815472) Pseudonocardia dioxanivorans CB1190 10367301 YP_004335437.1 CDS Psed_5451 NC_015312.1 5815577 5816548 R PFAM: Protein of unknown function DUF2236; KEGG: rha:RHA1_ro03740 hypothetical protein; hypothetical protein complement(5815577..5816548) Pseudonocardia dioxanivorans CB1190 10367302 YP_004335438.1 CDS Psed_5452 NC_015312.1 5816523 5817497 R KEGG: rop:ROP_pROB01-04060 ribonucleotide-diphosphate reductase subunit beta; ribonucleotide-diphosphate reductase subunit beta complement(5816523..5817497) Pseudonocardia dioxanivorans CB1190 10367303 YP_004335439.1 CDS Psed_5453 NC_015312.1 5817507 5818649 R KEGG: rop:ROP_pROB01-04070 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES complement(5817507..5818649) Pseudonocardia dioxanivorans CB1190 10367304 YP_004335440.1 CDS Psed_5454 NC_015312.1 5818949 5820208 R KEGG: mva:Mvan_0011 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase complement(5818949..5820208) Pseudonocardia dioxanivorans CB1190 10367305 YP_004335441.1 CDS Psed_5455 NC_015312.1 5820231 5820893 D KEGG: mva:Mvan_0010 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5820231..5820893 Pseudonocardia dioxanivorans CB1190 10367306 YP_004335442.1 CDS Psed_5456 NC_015312.1 5821044 5821598 D KEGG: mmi:MMAR_3152 hypothetical protein; hypothetical protein 5821044..5821598 Pseudonocardia dioxanivorans CB1190 10367307 YP_004335443.1 CDS Psed_5457 NC_015312.1 5821694 5821957 D hypothetical protein 5821694..5821957 Pseudonocardia dioxanivorans CB1190 10367308 YP_004335444.1 CDS Psed_5458 NC_015312.1 5821909 5822211 R hypothetical protein complement(5821909..5822211) Pseudonocardia dioxanivorans CB1190 10367309 YP_004335445.1 CDS Psed_5459 NC_015312.1 5822273 5823745 D KEGG: pzu:PHZ_c3113 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator 5822273..5823745 Pseudonocardia dioxanivorans CB1190 10367310 YP_004335446.1 CDS Psed_5460 NC_015312.1 5823834 5824922 D KEGG: svi:Svir_23620 predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase 5823834..5824922 Pseudonocardia dioxanivorans CB1190 10367311 YP_004335447.1 CDS Psed_5461 NC_015312.1 5825162 5825884 R KEGG: ami:Amir_6639 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 complement(5825162..5825884) Pseudonocardia dioxanivorans CB1190 10367312 YP_004335448.1 CDS Psed_5462 NC_015312.1 5825958 5826392 R TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal domain; Ribosomal protein L11, N-terminal domain; KEGG: req:REQ_36850 50S ribosomal protein L11 RplK; SMART: Ribosomal protein L11; 50S ribosomal protein L11 complement(5825958..5826392) Pseudonocardia dioxanivorans CB1190 10367313 YP_004335449.1 CDS Psed_5463 NC_015312.1 5826478 5827461 R TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KEGG: sen:SACE_6872 transcription antitermination regulator; SMART: Transcription antitermination protein, NusG, N-terminal; NusG antitermination factor complement(5826478..5827461) Pseudonocardia dioxanivorans CB1190 10367314 YP_004335450.1 CDS Psed_5464 NC_015312.1 5827538 5827882 R KEGG: sen:SACE_6873 protein translocation complex preprotein translocase subunit; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein SecE/Sec61-gamma protein; preprotein translocase subunit SecE complement(5827538..5827882) Pseudonocardia dioxanivorans CB1190 10367315 YP_004335451.1 CDS Psed_5465 NC_015312.1 5828261 5829484 D KEGG: ami:Amir_6643 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; aspartate transaminase 5828261..5829484 Pseudonocardia dioxanivorans CB1190 10367317 YP_004335452.1 CDS Psed_5466 NC_015312.1 5829545 5829754 R KEGG: nml:Namu_1442 hypothetical protein; hypothetical protein complement(5829545..5829754) Pseudonocardia dioxanivorans CB1190 10367318 YP_004335453.1 CDS Psed_5467 NC_015312.1 5829865 5830299 R PFAM: MaoC-like dehydratase; KEGG: svi:Svir_03560 acyl dehydratase; acyl dehydratase MaoC complement(5829865..5830299) Pseudonocardia dioxanivorans CB1190 10367319 YP_004335454.1 CDS Psed_5468 NC_015312.1 5830296 5830739 R KEGG: ami:Amir_6647 hypothetical protein; hypothetical protein complement(5830296..5830739) Pseudonocardia dioxanivorans CB1190 10367320 YP_004335455.1 CDS Psed_5469 NC_015312.1 5830742 5830909 R TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: nfa:nfa51190 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 complement(5830742..5830909) Pseudonocardia dioxanivorans CB1190 10367321 YP_004335456.1 CDS Psed_5470 NC_015312.1 5831236 5832909 R KEGG: fal:FRAAL4195 hypothetical protein; hypothetical protein complement(5831236..5832909) Pseudonocardia dioxanivorans CB1190 10367324 YP_004335457.1 CDS Psed_5471 NC_015312.1 5833206 5833658 D KEGG: cbr:CBG04650 Hypothetical protein CBG04650; hypothetical protein 5833206..5833658 Pseudonocardia dioxanivorans CB1190 10367325 YP_004335458.1 CDS Psed_5472 NC_015312.1 5833655 5836756 D KEGG: sna:Snas_1757 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 5833655..5836756 Pseudonocardia dioxanivorans CB1190 10367326 YP_004335459.1 CDS Psed_5473 NC_015312.1 5836857 5838143 D KEGG: tbi:Tbis_2431 cytochrome P450; PFAM: Cytochrome P450; linalool 8-monooxygenase 5836857..5838143 Pseudonocardia dioxanivorans CB1190 10367327 YP_004335460.1 CDS Psed_5474 NC_015312.1 5838140 5839810 D KEGG: amd:AMED_0996 long-chain acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; 4-coumarate--CoA ligase 5838140..5839810 Pseudonocardia dioxanivorans CB1190 10367328 YP_004335461.1 CDS Psed_5475 NC_015312.1 5840017 5840361 D hypothetical protein 5840017..5840361 Pseudonocardia dioxanivorans CB1190 10367329 YP_004335462.1 CDS Psed_5476 NC_015312.1 5840474 5840689 R hypothetical protein complement(5840474..5840689) Pseudonocardia dioxanivorans CB1190 10367330 YP_004335463.1 CDS Psed_5477 NC_015312.1 5840917 5841579 D KEGG: fal:FRAAL1555 TenA family transcriptional activator; PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; TenA family transcriptional activator 5840917..5841579 Pseudonocardia dioxanivorans CB1190 10367331 YP_004335464.1 CDS Psed_5478 NC_015312.1 5841617 5842027 R PFAM: Membrane protein of unknown function; KEGG: mil:ML5_0169 hypothetical protein; hypothetical protein complement(5841617..5842027) Pseudonocardia dioxanivorans CB1190 10367332 YP_004335465.1 CDS Psed_5479 NC_015312.1 5842089 5843318 R PFAM: Beta-lactamase-related; KEGG: amd:AMED_6648 beta-lactamase class C; beta-lactamase complement(5842089..5843318) Pseudonocardia dioxanivorans CB1190 10367333 YP_004335466.1 CDS Psed_5480 NC_015312.1 5843372 5843692 R PFAM: Small multidrug resistance protein; KEGG: fra:Francci3_2692 small multidrug resistance protein; small multidrug resistance protein complement(5843372..5843692) Pseudonocardia dioxanivorans CB1190 10367334 YP_004335467.1 CDS Psed_5481 NC_015312.1 5843765 5844781 D PFAM: Patatin/Phospholipase A2-related; KEGG: cre:CHLREDRAFT_174129 hypothetical protein; patatin 5843765..5844781 Pseudonocardia dioxanivorans CB1190 10367335 YP_004335468.1 CDS Psed_5482 NC_015312.1 5844882 5846192 R PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit complement(5844882..5846192) Pseudonocardia dioxanivorans CB1190 10367336 YP_004335469.1 CDS Psed_5483 NC_015312.1 5846514 5846987 D hypothetical protein 5846514..5846987 Pseudonocardia dioxanivorans CB1190 10367337 YP_004335470.1 CDS Psed_5484 NC_015312.1 5847006 5847905 R KEGG: gob:Gobs_1832 peptidase S15; peptidase S15 complement(5847006..5847905) Pseudonocardia dioxanivorans CB1190 10367338 YP_004335471.1 CDS Psed_5485 NC_015312.1 5848073 5848600 R KEGG: scb:SCAB_3531 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein complement(5848073..5848600) Pseudonocardia dioxanivorans CB1190 10367339 YP_004335472.1 CDS Psed_5486 NC_015312.1 5848744 5849607 D PFAM: BAAT/Acyl-CoA thioester hydrolase C-terminal; KEGG: ccs:CCNA_00926 acyl CoA thioesterase; BAAT/acyl-CoA thioester hydrolase 5848744..5849607 Pseudonocardia dioxanivorans CB1190 10367340 YP_004335473.1 CDS Psed_5487 NC_015312.1 5849627 5850217 R KEGG: sen:SACE_6312 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(5849627..5850217) Pseudonocardia dioxanivorans CB1190 10367341 YP_004335474.1 CDS Psed_5488 NC_015312.1 5850281 5851258 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: stp:Strop_3403 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5850281..5851258 Pseudonocardia dioxanivorans CB1190 10367342 YP_004335475.1 CDS Psed_5489 NC_015312.1 5851255 5851689 D PFAM: Domain of unknown function DUF336; KEGG: nfa:nfa26450 hypothetical protein; hypothetical protein 5851255..5851689 Pseudonocardia dioxanivorans CB1190 10367343 YP_004335476.1 CDS Psed_5490 NC_015312.1 5851756 5852124 D KEGG: rha:RHA1_ro04719 hypothetical protein; hypothetical protein 5851756..5852124 Pseudonocardia dioxanivorans CB1190 10367344 YP_004335477.1 CDS Psed_5491 NC_015312.1 5852134 5852598 R KEGG: fri:FraEuI1c_4776 dual specificity protein phosphatase; dual specificity protein phosphatase complement(5852134..5852598) Pseudonocardia dioxanivorans CB1190 10367345 YP_004335478.1 CDS Psed_5492 NC_015312.1 5852671 5853447 D KEGG: amd:AMED_4233 HemK protein; TIGRFAM: Conserved hypothetical protein CHP03704, protein-(glutamine-N5) methyltransferase; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase 5852671..5853447 Pseudonocardia dioxanivorans CB1190 10367346 YP_004335479.1 CDS Psed_5493 NC_015312.1 5853808 5854389 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_13230 TetR family transcriptional regulator; TetR family transcriptional regulator 5853808..5854389 Pseudonocardia dioxanivorans CB1190 10367347 YP_004335480.1 CDS Psed_5494 NC_015312.1 5854448 5855245 R KEGG: ami:Amir_3310 transcriptional regulator, TetR family; manually curated; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator complement(5854448..5855245) Pseudonocardia dioxanivorans CB1190 10367348 YP_004335481.1 CDS Psed_5495 NC_015312.1 5855405 5856142 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: lwe:lwe2751 3-ketoacyl-(acyl-carrier-protein) reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase 5855405..5856142 Pseudonocardia dioxanivorans CB1190 10367349 YP_004335482.1 CDS Psed_5496 NC_015312.1 5856820 5857170 D KEGG: amd:AMED_7834 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 5856820..5857170 Pseudonocardia dioxanivorans CB1190 10367350 YP_004335483.1 CDS Psed_5497 NC_015312.1 5857381 5858547 R KEGG: rop:ROP_13220 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; butyryl-CoA dehydrogenase complement(5857381..5858547) Pseudonocardia dioxanivorans CB1190 10367351 YP_004335484.1 CDS Psed_5498 NC_015312.1 5858565 5859347 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: msm:MSMEG_0715 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(5858565..5859347) Pseudonocardia dioxanivorans CB1190 10367352 YP_004335485.1 CDS Psed_5499 NC_015312.1 5859344 5860891 R KEGG: rxy:Rxyl_0353 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(5859344..5860891) Pseudonocardia dioxanivorans CB1190 10367353 YP_004335486.1 CDS Psed_5500 NC_015312.1 5860903 5862081 R TIGRFAM: Thiolase; KEGG: rha:RHA1_ro05543 thiolase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase complement(5860903..5862081) Pseudonocardia dioxanivorans CB1190 10367354 YP_004335487.1 CDS Psed_5501 NC_015312.1 5862141 5862932 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_4573 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5862141..5862932) Pseudonocardia dioxanivorans CB1190 10367355 YP_004335488.1 CDS Psed_5502 NC_015312.1 5863059 5863319 R hypothetical protein complement(5863059..5863319) Pseudonocardia dioxanivorans CB1190 10367356 YP_004335489.1 CDS Psed_5503 NC_015312.1 5863380 5865338 R PFAM: Hydantoinase B/oxoprolinase; KEGG: azc:AZC_2116 hydantoin utilization protein B; hydantoinase B/oxoprolinase complement(5863380..5865338) Pseudonocardia dioxanivorans CB1190 10367357 YP_004335490.1 CDS Psed_5504 NC_015312.1 5865335 5867422 R KEGG: axy:AXYL_04686 hydantoinase/oxoprolinase protein; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase complement(5865335..5867422) Pseudonocardia dioxanivorans CB1190 10367358 YP_004335491.1 CDS Psed_5505 NC_015312.1 5867777 5868940 R KEGG: cai:Caci_5437 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; alpha-methylacyl-CoA racemase complement(5867777..5868940) Pseudonocardia dioxanivorans CB1190 10367359 YP_004335492.1 CDS Psed_5506 NC_015312.1 5869002 5870006 R PFAM: Luciferase-like, subgroup; KEGG: hsl:OE2918F alkanesulfonate monooxygenase; luciferase-like protein complement(5869002..5870006) Pseudonocardia dioxanivorans CB1190 10367360 YP_004335493.1 CDS Psed_5507 NC_015312.1 5870008 5871597 R KEGG: cag:Cagg_0832 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(5870008..5871597) Pseudonocardia dioxanivorans CB1190 10367361 YP_004335494.1 CDS Psed_5508 NC_015312.1 5871798 5872481 R PFAM: Peptidase S54, rhomboid domain; KEGG: rop:ROP_60150 hypothetical membrane protein; peptidase S54, rhomboid domain-containing protein complement(5871798..5872481) Pseudonocardia dioxanivorans CB1190 10367362 YP_004335495.1 CDS Psed_5509 NC_015312.1 5872776 5873792 D KEGG: ami:Amir_3562 bile acid:sodium symporter; bile acid:sodium symporter 5872776..5873792 Pseudonocardia dioxanivorans CB1190 10367363 YP_004335496.1 CDS Psed_5511 NC_015312.1 5874107 5875159 D KEGG: nfa:nfa20960 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 5874107..5875159 Pseudonocardia dioxanivorans CB1190 10367365 YP_004335497.1 CDS Psed_5512 NC_015312.1 5875227 5875940 D KEGG: bid:Bind_2090 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 5875227..5875940 Pseudonocardia dioxanivorans CB1190 10367366 YP_004335498.1 CDS Psed_5513 NC_015312.1 5876020 5876283 D PFAM: Negative transcriptional regulator; KEGG: tbi:Tbis_2719 FMN-binding negative transcriptional regulator; Negative transcriptional regulator 5876020..5876283 Pseudonocardia dioxanivorans CB1190 10367367 YP_004335499.1 CDS Psed_5514 NC_015312.1 5876252 5876899 D PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: kra:Krad_2352 MOSC domain containing protein; MOSC domain-containing protein 5876252..5876899 Pseudonocardia dioxanivorans CB1190 10367368 YP_004335500.1 CDS Psed_5515 NC_015312.1 5876957 5879176 R PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: ami:Amir_4193 catalase/peroxidase HPI; catalase-peroxidase complement(5876957..5879176) Pseudonocardia dioxanivorans CB1190 10367369 YP_004335501.1 CDS Psed_5516 NC_015312.1 5879205 5879636 R KEGG: fri:FraEuI1c_2008 ferric uptake regulator, Fur family; manually curated; PFAM: Ferric-uptake regulator; Fur family ferric uptake regulator complement(5879205..5879636) Pseudonocardia dioxanivorans CB1190 10367370 YP_004335502.1 CDS Psed_5517 NC_015312.1 5880299 5881027 D hypothetical protein 5880299..5881027 Pseudonocardia dioxanivorans CB1190 10367371 YP_004335503.1 CDS Psed_5518 NC_015312.1 5881066 5881797 R PFAM: Protein of unknown function DUF81; KEGG: sgr:SGR_5215 hypothetical protein; hypothetical protein complement(5881066..5881797) Pseudonocardia dioxanivorans CB1190 10367372 YP_004335504.1 CDS Psed_5519 NC_015312.1 5882059 5882622 R KEGG: cfl:Cfla_3568 hypothetical protein; hypothetical protein complement(5882059..5882622) Pseudonocardia dioxanivorans CB1190 10367373 YP_004335505.1 CDS Psed_5520 NC_015312.1 5882909 5883451 D KEGG: cwo:Cwoe_5131 hypothetical protein; hypothetical protein 5882909..5883451 Pseudonocardia dioxanivorans CB1190 10367374 YP_004335506.1 CDS Psed_5521 NC_015312.1 5884036 5884644 D KEGG: req:REQ_34720 lipase; manually curated; PFAM: Lipase, GDSL; G-D-S-L family lipolytic protein 5884036..5884644 Pseudonocardia dioxanivorans CB1190 10367375 YP_004335507.1 CDS Psed_5524 NC_015312.1 5887940 5888911 D KEGG: pth:PTH_2401 hydrolase; hydrolase 5887940..5888911 Pseudonocardia dioxanivorans CB1190 10367378 YP_004335508.1 CDS Psed_5525 NC_015312.1 5888908 5889729 R KEGG: nfa:nfa2260 hypothetical protein; hypothetical protein complement(5888908..5889729) Pseudonocardia dioxanivorans CB1190 10367379 YP_004335509.1 CDS Psed_5526 NC_015312.1 5889734 5890561 R KEGG: sgr:SGR_3587 hypothetical protein; hypothetical protein complement(5889734..5890561) Pseudonocardia dioxanivorans CB1190 10367380 YP_004335510.1 CDS Psed_5527 NC_015312.1 5890688 5891116 D KEGG: cai:Caci_8555 hypothetical protein; hypothetical protein 5890688..5891116 Pseudonocardia dioxanivorans CB1190 10367381 YP_004335511.1 CDS Psed_5528 NC_015312.1 5891226 5891624 D hypothetical protein 5891226..5891624 Pseudonocardia dioxanivorans CB1190 10367382 YP_004335512.1 CDS Psed_5529 NC_015312.1 5891621 5891905 D PFAM: Transcription factor WhiB; KEGG: tcu:Tcur_0266 transcription factor WhiB; transcription factor WhiB 5891621..5891905 Pseudonocardia dioxanivorans CB1190 10367383 YP_004335513.1 CDS Psed_5530 NC_015312.1 5891902 5892069 D hypothetical protein 5891902..5892069 Pseudonocardia dioxanivorans CB1190 10367384 YP_004335514.1 CDS Psed_5531 NC_015312.1 5892066 5893559 D KEGG: ami:Amir_0921 DNA segregation ATPase FtsK/SpoIIIE-related protein; PFAM: Cell divisionFtsK/SpoIIIE; SMART: ATPase, AAA+ type, core; DNA translocase FtsK 5892066..5893559 Pseudonocardia dioxanivorans CB1190 10367385 YP_004335515.1 CDS Psed_5532 NC_015312.1 5893556 5895235 D KEGG: ami:Amir_0922 hypothetical protein; hypothetical protein 5893556..5895235 Pseudonocardia dioxanivorans CB1190 10367386 YP_004335516.1 CDS Psed_5533 NC_015312.1 5895232 5895441 D KEGG: sro:Sros_8661 hypothetical protein; hypothetical protein 5895232..5895441 Pseudonocardia dioxanivorans CB1190 10367387 YP_004335517.1 CDS Psed_5534 NC_015312.1 5895438 5896823 D PFAM: Integrase, catalytic core, phage; KEGG: amd:AMED_6149 integrase; integrase protein 5895438..5896823 Pseudonocardia dioxanivorans CB1190 10367388 YP_004335518.1 CDS Psed_5535 NC_015312.1 5897108 5897599 D KEGG: amd:AMED_0579 hypothetical protein; HAMAP: Protein of unknown function DUF520; PFAM: Protein of unknown function DUF520; hypothetical protein 5897108..5897599 Pseudonocardia dioxanivorans CB1190 10367390 YP_004335519.1 CDS Psed_5536 NC_015312.1 5897642 5898502 R PFAM: Drug/metabolite transporter; KEGG: nda:Ndas_5358 protein of unknown function DUF6 transmembrane; hypothetical protein complement(5897642..5898502) Pseudonocardia dioxanivorans CB1190 10367391 YP_004335520.1 CDS Psed_5537 NC_015312.1 5898790 5899365 D KEGG: fre:Franean1_1505 hypothetical protein; hypothetical protein 5898790..5899365 Pseudonocardia dioxanivorans CB1190 10367392 YP_004335521.1 CDS Psed_5538 NC_015312.1 5899386 5900279 R PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein complement(5899386..5900279) Pseudonocardia dioxanivorans CB1190 10367393 YP_004335522.1 CDS Psed_5539 NC_015312.1 5900572 5900913 D hypothetical protein 5900572..5900913 Pseudonocardia dioxanivorans CB1190 10367394 YP_004335523.1 CDS Psed_5540 NC_015312.1 5900914 5901141 R hypothetical protein complement(5900914..5901141) Pseudonocardia dioxanivorans CB1190 10367395 YP_004335524.1 CDS Psed_5541 NC_015312.1 5901291 5902118 R KEGG: bbe:BBR47_04660 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(5901291..5902118) Pseudonocardia dioxanivorans CB1190 10367396 YP_004335525.1 CDS Psed_5542 NC_015312.1 5902162 5905161 R KEGG: ade:Adeh_3289 SARP family transcriptional regulator; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator complement(5902162..5905161) Pseudonocardia dioxanivorans CB1190 10367397 YP_004335526.1 CDS Psed_5543 NC_015312.1 5905269 5905625 D KEGG: gbm:Gbem_0528 hypothetical protein; hypothetical protein 5905269..5905625 Pseudonocardia dioxanivorans CB1190 10367398 YP_004335527.1 CDS Psed_5544 NC_015312.1 5905627 5906184 D TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: sro:Sros_7305 hypothetical protein; hypothetical protein 5905627..5906184 Pseudonocardia dioxanivorans CB1190 10367399 YP_004335528.1 CDS Psed_5545 NC_015312.1 5906181 5906534 D PFAM: Protein of unknown function DUF1486; KEGG: mlo:mll8193 hypothetical protein; hypothetical protein 5906181..5906534 Pseudonocardia dioxanivorans CB1190 10367400 YP_004335529.1 CDS Psed_5546 NC_015312.1 5906548 5907396 R KEGG: sen:SACE_6884 protease HtpX-like protein; HAMAP: Peptidase M48, protease HtpX, PFAM: Peptidase M48; protease htpX complement(5906548..5907396) Pseudonocardia dioxanivorans CB1190 10367401 YP_004335530.1 CDS Psed_5547 NC_015312.1 5907486 5908037 R PFAM: Thioesterase superfamily; KEGG: fri:FraEuI1c_2920 thioesterase superfamily protein; thioesterase complement(5907486..5908037) Pseudonocardia dioxanivorans CB1190 10367402 YP_004335531.1 CDS Psed_5548 NC_015312.1 5908072 5908839 D PFAM: Crotonase, core; KEGG: ami:Amir_6663 enoyl-CoA hydratase; enoyl-CoA hydratase 5908072..5908839 Pseudonocardia dioxanivorans CB1190 10367403 YP_004335532.1 CDS Psed_5549 NC_015312.1 5908946 5910889 D TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: ami:Amir_6664 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; 2-oxoacid:acceptor oxidoreductase subunit alpha 5908946..5910889 Pseudonocardia dioxanivorans CB1190 10367404 YP_004335533.1 CDS Psed_5550 NC_015312.1 5910886 5911986 D KEGG: rha:RHA1_ro02389 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; 2-oxoglutarate synthase 5910886..5911986 Pseudonocardia dioxanivorans CB1190 10367405 YP_004335534.1 CDS Psed_5551 NC_015312.1 5912102 5912491 R KEGG: amd:AMED_0538 hypothetical protein; hypothetical protein complement(5912102..5912491) Pseudonocardia dioxanivorans CB1190 10367406 YP_004335535.1 CDS Psed_5552 NC_015312.1 5912502 5913170 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: amd:AMED_8588 OmpA family protein; OmpA/MotB domain-containing protein complement(5912502..5913170) Pseudonocardia dioxanivorans CB1190 10367407 YP_004335536.1 CDS Psed_5554 NC_015312.1 5914388 5915320 D TIGRFAM: RarD protein; KEGG: ami:Amir_6667 RarD protein, DMT superfamily transporter; RarD protein, DMT superfamily transporter 5914388..5915320 Pseudonocardia dioxanivorans CB1190 10367409 YP_004335537.1 CDS Psed_5555 NC_015312.1 5915373 5916368 R KEGG: ami:Amir_6668 polyprenyl synthetase; PFAM: Polyprenyl synthetase; trans-hexaprenyltranstransferase complement(5915373..5916368) Pseudonocardia dioxanivorans CB1190 10367410 YP_004335538.1 CDS Psed_5556 NC_015312.1 5916386 5918011 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; HAMAP: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: sen:SACE_6889 NADH dehydrogenase subunit N; NAD(P)H-quinone oxidoreductase subunit 2 complement(5916386..5918011) Pseudonocardia dioxanivorans CB1190 10367411 YP_004335539.1 CDS Psed_5557 NC_015312.1 5918008 5919621 R TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: ami:Amir_6670 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M complement(5918008..5919621) Pseudonocardia dioxanivorans CB1190 10367412 YP_004335540.1 CDS Psed_5558 NC_015312.1 5919618 5921576 R TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: svi:Svir_03270 NADH dehydrogenase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; proton-translocating NADH-quinone oxidoreductase subunit L complement(5919618..5921576) Pseudonocardia dioxanivorans CB1190 10367413 YP_004335541.1 CDS Psed_5559 NC_015312.1 5921586 5921885 R KEGG: sen:SACE_6892 NADH dehydrogenase subunit K; HAMAP: NADH-ubiquinone oxidoreductase chain 4L/K; PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; NAD(P)H-quinone oxidoreductase subunit 4L complement(5921586..5921885) Pseudonocardia dioxanivorans CB1190 10367414 YP_004335542.1 CDS Psed_5560 NC_015312.1 5921882 5922706 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: amd:AMED_0529 NADH dehydrogenase I subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(5921882..5922706) Pseudonocardia dioxanivorans CB1190 10367415 YP_004335543.1 CDS Psed_5561 NC_015312.1 5922703 5923269 R PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: amd:AMED_0528 NADH dehydrogenase I subunit I; NAD(P)H-quinone oxidoreductase subunit I complement(5922703..5923269) Pseudonocardia dioxanivorans CB1190 10367416 YP_004335544.1 CDS Psed_5562 NC_015312.1 5923270 5924565 R KEGG: ami:Amir_6675 NADH dehydrogenase subunit H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H; NADH dehydrogenase (quinone) complement(5923270..5924565) Pseudonocardia dioxanivorans CB1190 10367417 YP_004335545.1 CDS Psed_5563 NC_015312.1 5924562 5927024 R SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: ami:Amir_6676 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; NADH-quinone oxidoreductase subunit G complement(5924562..5927024) Pseudonocardia dioxanivorans CB1190 10367418 YP_004335546.1 CDS Psed_5564 NC_015312.1 5927021 5928373 R SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: sen:SACE_6897 NADH dehydrogenase I chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F complement(5927021..5928373) Pseudonocardia dioxanivorans CB1190 10367419 YP_004335547.1 CDS Psed_5565 NC_015312.1 5928370 5929191 R KEGG: ami:Amir_6678 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH dehydrogenase (quinone) complement(5928370..5929191) Pseudonocardia dioxanivorans CB1190 10367420 YP_004335548.1 CDS Psed_5566 NC_015312.1 5929223 5930545 R PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, subunit D; HAMAP: NAD(P)H-quinone oxidoreductase subunit D/H; KEGG: amd:AMED_0523 NADH dehydrogenase I subunit D; NAD(P)H-quinone oxidoreductase subunit H complement(5929223..5930545) Pseudonocardia dioxanivorans CB1190 10367421 YP_004335549.1 CDS Psed_5567 NC_015312.1 5930542 5931417 R TIGRFAM: NADH dehydrogenase, subunit C; HAMAP: NADH dehydrogenase, subunit C; KEGG: svi:Svir_03180 NADH dehydrogenase subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; NAD(P)H-quinone oxidoreductase subunit J complement(5930542..5931417) Pseudonocardia dioxanivorans CB1190 10367422 YP_004335550.1 CDS Psed_5568 NC_015312.1 5931425 5931976 R PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH-ubiquinone oxidoreductase, 20 Kd subunit; HAMAP: NADH-ubiquinone oxidoreductase, 20 Kd subunit; KEGG: ami:Amir_6681 NADH dehydrogenase subunit B; NAD(P)H-quinone oxidoreductase subunit K complement(5931425..5931976) Pseudonocardia dioxanivorans CB1190 10367423 YP_004335551.1 CDS Psed_5569 NC_015312.1 5931986 5932351 R KEGG: sen:SACE_6902 NADH dehydrogenase I chain A; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; NAD(P)H-quinone oxidoreductase subunit 3 complement(5931986..5932351) Pseudonocardia dioxanivorans CB1190 10367424 YP_004335552.1 CDS Psed_5570 NC_015312.1 5932469 5933794 R KEGG: sen:SACE_6903 electron transfer oxidoreductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase; geranylgeranyl reductase complement(5932469..5933794) Pseudonocardia dioxanivorans CB1190 10367425 YP_004335553.1 CDS Psed_5571 NC_015312.1 5933993 5934682 R TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: mav:MAV_4584 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE complement(5933993..5934682) Pseudonocardia dioxanivorans CB1190 10367426 YP_004335554.1 CDS Psed_5572 NC_015312.1 5934693 5935865 R PFAM: Glycosyl transferase, group 1; KEGG: amd:AMED_0515 glycosyl transferase; group 1 glycosyl transferase complement(5934693..5935865) Pseudonocardia dioxanivorans CB1190 10367427 YP_004335555.1 CDS Psed_5573 NC_015312.1 5935822 5937015 R PFAM: Glycosyl transferase, group 1; KEGG: sen:SACE_6905 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5935822..5937015) Pseudonocardia dioxanivorans CB1190 10367428 YP_004335556.1 CDS Psed_5574 NC_015312.1 5937370 5938212 D PFAM: Inositol monophosphatase; KEGG: amd:AMED_0513 myo-inositol-1(or 4)-monophosphatase; inositol monophosphatase 5937370..5938212 Pseudonocardia dioxanivorans CB1190 10367429 YP_004335557.1 CDS Psed_5576 NC_015312.1 5939162 5939674 R KEGG: sen:SACE_6910 hypothetical protein; hypothetical protein complement(5939162..5939674) Pseudonocardia dioxanivorans CB1190 10367431 YP_004335558.1 CDS Psed_5577 NC_015312.1 5939818 5941023 D TIGRFAM: Isochorismate synthase; KEGG: ami:Amir_6694 isochorismate synthase; PFAM: Chorismate binding, C-terminal; isochorismate synthase 5939818..5941023 Pseudonocardia dioxanivorans CB1190 10367432 YP_004335559.1 CDS Psed_5578 NC_015312.1 5941321 5944119 R KEGG: msm:MSMEG_3290 regulatory protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(5941321..5944119) Pseudonocardia dioxanivorans CB1190 10367433 YP_004335560.1 CDS Psed_5579 NC_015312.1 5944313 5945161 D KEGG: mav:MAV_2744 MOSC domain-containing protein; manually curated; PFAM: MOSC, N-terminal beta barrel; Molybdenum cofactor sulfurase, C-terminal; MOSC domain-containing protein beta barrel domain-containing protein 5944313..5945161 Pseudonocardia dioxanivorans CB1190 10367434 YP_004335561.1 CDS Psed_5580 NC_015312.1 5945430 5945813 D TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: gbr:Gbro_2776 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein 5945430..5945813 Pseudonocardia dioxanivorans CB1190 10367435 YP_004335562.1 CDS Psed_5581 NC_015312.1 5945846 5946382 R PFAM: Protein of unknown function DUF1470; KEGG: msp:Mspyr1_42590 hypothetical protein; hypothetical protein complement(5945846..5946382) Pseudonocardia dioxanivorans CB1190 10367436 YP_004335563.1 CDS Psed_5582 NC_015312.1 5946452 5947345 D PFAM: Protein of unknown function DUF427; KEGG: rop:ROP_13420 hypothetical protein; hypothetical protein 5946452..5947345 Pseudonocardia dioxanivorans CB1190 10367437 YP_004335564.1 CDS Psed_5583 NC_015312.1 5947400 5948284 D KEGG: gob:Gobs_2979 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 5947400..5948284 Pseudonocardia dioxanivorans CB1190 10367438 YP_004335565.1 CDS Psed_5584 NC_015312.1 5948337 5950067 D KEGG: amd:AMED_3893 phthalate 4,5-dioxygenase; PFAM: Molybdenum cofactor sulfurase, C-terminal; 3-alpha domain; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; nitric oxide dioxygenase 5948337..5950067 Pseudonocardia dioxanivorans CB1190 10367439 YP_004335566.1 CDS Psed_5585 NC_015312.1 5950088 5950522 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_1161 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5950088..5950522 Pseudonocardia dioxanivorans CB1190 10367440 YP_004335567.1 CDS Psed_5586 NC_015312.1 5950630 5951016 D PFAM: 4-oxalocrotonate tautomerase; KEGG: bid:Bind_2018 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 5950630..5951016 Pseudonocardia dioxanivorans CB1190 10367441 YP_004335568.1 CDS Psed_5587 NC_015312.1 5951076 5952752 R PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; TIGRFAM: Menaquinone biosynthesis protein MenD; KEGG: nfa:nfa51330 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(5951076..5952752) Pseudonocardia dioxanivorans CB1190 10367442 YP_004335569.1 CDS Psed_5588 NC_015312.1 5952786 5954072 D KEGG: ami:Amir_4825 aminotransferase class-III; PFAM: Aminotransferase class-III; 2,2-dialkylglycine decarboxylase 5952786..5954072 Pseudonocardia dioxanivorans CB1190 10367443 YP_004335570.1 CDS Psed_5589 NC_015312.1 5954090 5955730 D KEGG: sgr:SGR_985 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 5954090..5955730 Pseudonocardia dioxanivorans CB1190 10367444 YP_004335571.1 CDS Psed_5590 NC_015312.1 5955775 5956083 R PFAM: FeS cluster biogenesis; KEGG: cwo:Cwoe_3919 HesB/YadR/YfhF-family protein; HesB/YadR/YfhF-family protein complement(5955775..5956083) Pseudonocardia dioxanivorans CB1190 10367445 YP_004335572.1 CDS Psed_5591 NC_015312.1 5956147 5956974 R KEGG: sro:Sros_7952 2,5-didehydrogluconate reductase; PFAM: NADP-dependent oxidoreductase domain; 2,5-didehydrogluconate reductase complement(5956147..5956974) Pseudonocardia dioxanivorans CB1190 10367446 YP_004335573.1 CDS Psed_5592 NC_015312.1 5957291 5957989 R KEGG: nml:Namu_4576 hypothetical protein; hypothetical protein complement(5957291..5957989) Pseudonocardia dioxanivorans CB1190 10367447 YP_004335574.1 CDS Psed_5593 NC_015312.1 5958022 5960970 R KEGG: sen:SACE_3788 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich domain; D-lactate dehydrogenase complement(5958022..5960970) Pseudonocardia dioxanivorans CB1190 10367448 YP_004335575.1 CDS Psed_5594 NC_015312.1 5961200 5961865 D PFAM: ANTAR; KEGG: gob:Gobs_0560 PAS/PAC sensor protein; ANTAR domain-containing protein 5961200..5961865 Pseudonocardia dioxanivorans CB1190 10367449 YP_004335576.1 CDS Psed_5595 NC_015312.1 5962037 5962561 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: fre:Franean1_4388 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(5962037..5962561) Pseudonocardia dioxanivorans CB1190 10367450 YP_004335577.1 CDS Psed_5596 NC_015312.1 5962608 5963117 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_2406 transcriptional regulator, TetR family protein; TetR family transcriptional regulator 5962608..5963117 Pseudonocardia dioxanivorans CB1190 10367451 YP_004335578.1 CDS Psed_5597 NC_015312.1 5963202 5964110 D TIGRFAM: Naphthoate synthase; KEGG: ami:Amir_6701 naphthoate synthase; PFAM: Crotonase, core; naphthoate synthase 5963202..5964110 Pseudonocardia dioxanivorans CB1190 10367452 YP_004335579.1 CDS Psed_5598 NC_015312.1 5964220 5965287 R KEGG: sen:SACE_1100 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein complement(5964220..5965287) Pseudonocardia dioxanivorans CB1190 10367453 YP_004335580.1 CDS Psed_5599 NC_015312.1 5965409 5967841 R TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; Helicase, C-terminal; Helicase-associated domain; KEGG: amd:AMED_1284 ATP-dependent helicase HrpB; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase-associated domain; ATP-dependent helicase HrpB complement(5965409..5967841) Pseudonocardia dioxanivorans CB1190 10367454 YP_004335581.1 CDS Psed_5600 NC_015312.1 5967937 5969100 D KEGG: cfl:Cfla_2727 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 5967937..5969100 Pseudonocardia dioxanivorans CB1190 10367455 YP_004335582.1 CDS Psed_5601 NC_015312.1 5969255 5970544 D PFAM: SH3, type 3; KEGG: ami:Amir_6699 hypothetical protein; SH3 type 3 domain-containing protein 5969255..5970544 Pseudonocardia dioxanivorans CB1190 10367456 YP_004335583.1 CDS Psed_5602 NC_015312.1 5970554 5971435 D KEGG: sen:SACE_6917 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 5970554..5971435 Pseudonocardia dioxanivorans CB1190 10367457 YP_004335584.1 CDS Psed_5603 NC_015312.1 5971391 5971750 R KEGG: ami:Amir_6707 hypothetical protein; hypothetical protein complement(5971391..5971750) Pseudonocardia dioxanivorans CB1190 10367458 YP_004335585.1 CDS Psed_5604 NC_015312.1 5971985 5972203 D KEGG: ami:Amir_6709 DNA binding domain protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: HTH transcriptional regulator, MerR; excisionase 5971985..5972203 Pseudonocardia dioxanivorans CB1190 10367459 YP_004335586.1 CDS Psed_5605 NC_015312.1 5972358 5972597 D KEGG: amd:AMED_0501 hypothetical protein; hypothetical protein 5972358..5972597 Pseudonocardia dioxanivorans CB1190 10367460 YP_004335587.1 CDS Psed_5606 NC_015312.1 5972643 5975615 R KEGG: amd:AMED_0500 hypothetical protein; hypothetical protein complement(5972643..5975615) Pseudonocardia dioxanivorans CB1190 10367461 YP_004335588.1 CDS Psed_5607 NC_015312.1 5975884 5976858 R KEGG: svi:Svir_02970 cytochrome c-type biogenesis protein CcsB; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB complement(5975884..5976858) Pseudonocardia dioxanivorans CB1190 10367462 YP_004335589.1 CDS Psed_5608 NC_015312.1 5976858 5978765 R PFAM: Cytochrome c biogenesis protein; KEGG: sen:SACE_6931 cytochrome c biogenesis membrane protein; ResB family protein complement(5976858..5978765) Pseudonocardia dioxanivorans CB1190 10367463 YP_004335590.1 CDS Psed_5609 NC_015312.1 5978767 5979540 R PFAM: Cytochrome c assembly protein, transmembrane domain; KEGG: sen:SACE_6932 cytochrome c-type biogenesis protein; cytochrome c biogenesis protein transmembrane region complement(5978767..5979540) Pseudonocardia dioxanivorans CB1190 10367464 YP_004335591.1 CDS Psed_5610 NC_015312.1 5979624 5980217 R PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sen:SACE_6933 thiol-disulfide isomerase/thioredoxin; alkyl hydroperoxide reductase complement(5979624..5980217) Pseudonocardia dioxanivorans CB1190 10367465 YP_004335592.1 CDS Psed_5611 NC_015312.1 5980214 5980846 R KEGG: gbr:Gbro_1035 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase complement(5980214..5980846) Pseudonocardia dioxanivorans CB1190 10367466 YP_004335593.1 CDS Psed_5612 NC_015312.1 5980843 5982174 R PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: nfa:nfa51600 glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde 2,1-aminomutase complement(5980843..5982174) Pseudonocardia dioxanivorans CB1190 10367467 YP_004335594.1 CDS Psed_5613 NC_015312.1 5982277 5983413 R KEGG: gob:Gobs_4422 hypothetical protein; hypothetical protein complement(5982277..5983413) Pseudonocardia dioxanivorans CB1190 10367468 YP_004335595.1 CDS Psed_5614 NC_015312.1 5983528 5984037 R KEGG: bcv:Bcav_0688 hypothetical protein; hypothetical protein complement(5983528..5984037) Pseudonocardia dioxanivorans CB1190 10367469 YP_004335596.1 CDS Psed_5615 NC_015312.1 5984209 5985030 R PFAM: RDD; KEGG: sro:Sros_9150 membrane protein/domain-like protein; RDD domain-containing protein complement(5984209..5985030) Pseudonocardia dioxanivorans CB1190 10367470 YP_004335597.1 CDS Psed_5616 NC_015312.1 5985096 5986076 R KEGG: ami:Amir_6727 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; porphobilinogen synthase complement(5985096..5986076) Pseudonocardia dioxanivorans CB1190 10367471 YP_004335598.1 CDS Psed_5617 NC_015312.1 5986394 5987935 R KEGG: ami:Amir_6728 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; uroporphyrinogen-III C-methyltransferase complement(5986394..5987935) Pseudonocardia dioxanivorans CB1190 10367472 YP_004335599.1 CDS Psed_5618 NC_015312.1 5987932 5988915 R TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; KEGG: ami:Amir_6729 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain; porphobilinogen deaminase complement(5987932..5988915) Pseudonocardia dioxanivorans CB1190 10367473 YP_004335600.1 CDS Psed_5619 NC_015312.1 5988912 5990324 R TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: sen:SACE_6946 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; glutamyl-tRNA reductase complement(5988912..5990324) Pseudonocardia dioxanivorans CB1190 10367474 YP_004335601.1 CDS Psed_5620 NC_015312.1 5990327 5991163 R HAMAP: Transcriptional repressor, redox-sensing, Rex; PFAM: CoA-binding; Rex DNA-binding, C-terminal; KEGG: amd:AMED_0479 AT-rich DNA-binding protein; SMART: CoA-binding; redox-sensing transcriptional repressor rex complement(5990327..5991163) Pseudonocardia dioxanivorans CB1190 10367475 YP_004335602.1 CDS Psed_5621 NC_015312.1 5991500 5992183 R KEGG: amd:AMED_7496 fasciclin repeat-containing protein; PFAM: FAS1 domain; SMART: FAS1 domain; beta-Ig-H3/fasciclin complement(5991500..5992183) Pseudonocardia dioxanivorans CB1190 10367476 YP_004335603.1 CDS Psed_5622 NC_015312.1 5992301 5994121 R PFAM: Oxidoreductase, molybdopterin-binding domain; Moybdenum cofactor oxidoreductase, dimerisation; KEGG: ami:Amir_6733 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein complement(5992301..5994121) Pseudonocardia dioxanivorans CB1190 10367477 YP_004335604.1 CDS Psed_5623 NC_015312.1 5994195 5994437 R PFAM: Glutaredoxin-like; KEGG: svi:Svir_02830 glutaredoxin-like domain (DUF836); glutaredoxin 2 complement(5994195..5994437) Pseudonocardia dioxanivorans CB1190 10367478 YP_004335605.1 CDS Psed_5624 NC_015312.1 5994489 5996117 R KEGG: sen:SACE_6950 fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(5994489..5996117) Pseudonocardia dioxanivorans CB1190 10367479 YP_004335606.1 CDS Psed_5625 NC_015312.1 5996782 5997390 D KEGG: ami:Amir_6736 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 5996782..5997390 Pseudonocardia dioxanivorans CB1190 10367480 YP_004335607.1 CDS Psed_5626 NC_015312.1 5997581 5999161 D KEGG: ami:Amir_6737 hypothetical protein; hypothetical protein 5997581..5999161 Pseudonocardia dioxanivorans CB1190 10367481 YP_004335608.1 CDS Psed_5627 NC_015312.1 5999311 6000249 D KEGG: svi:Svir_02790 HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 5999311..6000249 Pseudonocardia dioxanivorans CB1190 10367482 YP_004335609.1 CDS Psed_5628 NC_015312.1 6000307 6001776 R KEGG: ami:Amir_6739 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(6000307..6001776) Pseudonocardia dioxanivorans CB1190 10367483 YP_004335610.1 CDS Psed_5629 NC_015312.1 6001773 6002810 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ami:Amir_6740 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(6001773..6002810) Pseudonocardia dioxanivorans CB1190 10367484 YP_004335611.1 CDS Psed_5630 NC_015312.1 6003007 6003108 R PFAM: Domain of unknown function DUF1713, mitochondria; KEGG: sen:SACE_6957 hypothetical protein; hypothetical protein complement(6003007..6003108) Pseudonocardia dioxanivorans CB1190 10367485 YP_004335612.1 CDS Psed_5631 NC_015312.1 6003288 6003500 R KEGG: svi:Svir_02760 DNA-binding protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Prophage CP4-57 regulatory; excisionase complement(6003288..6003500) Pseudonocardia dioxanivorans CB1190 10367486 YP_004335613.1 CDS Psed_5632 NC_015312.1 6003653 6004465 R TIGRFAM: Pyrroline-5-carboxylate reductase; KEGG: svi:Svir_02750 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(6003653..6004465) Pseudonocardia dioxanivorans CB1190 10367487 YP_004335614.1 CDS Psed_5633 NC_015312.1 6004864 6005718 R KEGG: amd:AMED_0465 aromatic compounds degradation protein PaaI; aromatic compounds degradation protein PaaI complement(6004864..6005718) Pseudonocardia dioxanivorans CB1190 10367488 YP_004335615.1 CDS Psed_5634 NC_015312.1 6005715 6006650 R KEGG: saq:Sare_0409 proline dehydrogenase; PFAM: Proline dehydrogenase; proline dehydrogenase complement(6005715..6006650) Pseudonocardia dioxanivorans CB1190 10367489 YP_004335616.1 CDS Psed_5635 NC_015312.1 6006703 6007545 R PFAM: Xylose isomerase, TIM barrel domain; KEGG: ami:Amir_6746 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(6006703..6007545) Pseudonocardia dioxanivorans CB1190 10367490 YP_004335617.1 CDS Psed_5636 NC_015312.1 6007551 6009014 R KEGG: sen:SACE_6963 hypothetical protein; hypothetical protein complement(6007551..6009014) Pseudonocardia dioxanivorans CB1190 10367491 YP_004335618.1 CDS Psed_5637 NC_015312.1 6009011 6010009 R PFAM: Ppx/GppA phosphatase; KEGG: ami:Amir_6748 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(6009011..6010009) Pseudonocardia dioxanivorans CB1190 10367492 YP_004335619.1 CDS Psed_5638 NC_015312.1 6010113 6010802 R KEGG: amd:AMED_0460 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(6010113..6010802) Pseudonocardia dioxanivorans CB1190 10367493 YP_004335620.1 CDS Psed_5639 NC_015312.1 6010804 6012024 R KEGG: sen:SACE_6966 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase complement(6010804..6012024) Pseudonocardia dioxanivorans CB1190 10367494 YP_004335621.1 CDS Psed_5640 NC_015312.1 6012175 6012915 R KEGG: svi:Svir_02670 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; SMART: Histidine phosphatase superfamily, clade-1; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(6012175..6012915) Pseudonocardia dioxanivorans CB1190 10367495 YP_004335622.1 CDS Psed_5641 NC_015312.1 6012948 6013496 R KEGG: svi:Svir_14940 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(6012948..6013496) Pseudonocardia dioxanivorans CB1190 10367496 YP_004335623.1 CDS Psed_5642 NC_015312.1 6013591 6014100 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gob:Gobs_0101 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6013591..6014100 Pseudonocardia dioxanivorans CB1190 10367497 YP_004335624.1 CDS Psed_5643 NC_015312.1 6014843 6015931 R KEGG: kra:Krad_3419 lipoprotein; lipoprotein complement(6014843..6015931) Pseudonocardia dioxanivorans CB1190 10367498 YP_004335625.1 CDS Psed_5644 NC_015312.1 6016662 6017141 R PFAM: Protein of unknown function DUF2596; KEGG: svi:Svir_02660 protein of unknown function (DUF2596); hypothetical protein complement(6016662..6017141) Pseudonocardia dioxanivorans CB1190 10367499 YP_004335626.1 CDS Psed_5645 NC_015312.1 6017160 6018533 R KEGG: ami:Amir_6757 UDP-N-acetylglucosamine; TIGRFAM: Mycothiol biosynthesis protein, MshA; PFAM: Glycosyl transferase, group 1; D-inositol-3-phosphate glycosyltransferase complement(6017160..6018533) Pseudonocardia dioxanivorans CB1190 10367500 YP_004335627.1 CDS Psed_5646 NC_015312.1 6018530 6021523 R KEGG: sen:SACE_0599 HSP90 family heat shock protein; heat shock protein 90 complement(6018530..6021523) Pseudonocardia dioxanivorans CB1190 10367501 YP_004335628.1 CDS Psed_5647 NC_015312.1 6021562 6022395 R KEGG: amd:AMED_8485 hypothetical protein; hypothetical protein complement(6021562..6022395) Pseudonocardia dioxanivorans CB1190 10367502 YP_004335629.1 CDS Psed_5648 NC_015312.1 6022424 6023185 D PFAM: Glutamine cyclotransferase; KEGG: gob:Gobs_3145 glutamine cyclotransferase; glutamine cyclotransferase 6022424..6023185 Pseudonocardia dioxanivorans CB1190 10367503 YP_004335630.1 CDS Psed_5649 NC_015312.1 6023207 6025195 D PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_0596 hypothetical protein; major facilitator superfamily protein 6023207..6025195 Pseudonocardia dioxanivorans CB1190 10367504 YP_004335631.1 CDS Psed_5650 NC_015312.1 6025219 6025698 D KEGG: ami:Amir_0482 hypothetical protein; hypothetical protein 6025219..6025698 Pseudonocardia dioxanivorans CB1190 10367505 YP_004335632.1 CDS Psed_5651 NC_015312.1 6025714 6026184 R KEGG: svi:Svir_34040 cold-shock DNA-binding protein family; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(6025714..6026184) Pseudonocardia dioxanivorans CB1190 10367506 YP_004335633.1 CDS Psed_5652 NC_015312.1 6026321 6027985 R KEGG: amd:AMED_1463 fatty-acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(6026321..6027985) Pseudonocardia dioxanivorans CB1190 10367507 YP_004335634.1 CDS Psed_5653 NC_015312.1 6028120 6029382 D TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: sma:SAV_2294 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; seryl-tRNA synthetase 6028120..6029382 Pseudonocardia dioxanivorans CB1190 10367508 YP_004335635.1 CDS Psed_5654 NC_015312.1 6029413 6030906 R KEGG: ami:Amir_3551 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; aqualysin 1 complement(6029413..6030906) Pseudonocardia dioxanivorans CB1190 10367509 YP_004335636.1 CDS Psed_5655 NC_015312.1 6031434 6032561 R PFAM: ABC transporter-like; Transport-associated OB, type 1; KEGG: sen:SACE_0573 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; molybdate-transporting ATPase complement(6031434..6032561) Pseudonocardia dioxanivorans CB1190 10367510 YP_004335637.1 CDS Psed_5656 NC_015312.1 6032558 6033409 R KEGG: rop:ROP_34570 molybdate ABC transporter permease; TIGRFAM: NifC-like ABC-type porter; Molybdate ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; ABC transporter complement(6032558..6033409) Pseudonocardia dioxanivorans CB1190 10367511 YP_004335638.1 CDS Psed_5657 NC_015312.1 6033458 6034249 R KEGG: kra:Krad_4177 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; molybdenum ABC transporter substrate-binding protein complement(6033458..6034249) Pseudonocardia dioxanivorans CB1190 10367512 YP_004335639.1 CDS Psed_5658 NC_015312.1 6034246 6034659 R KEGG: sen:SACE_0570 molybdate ABC molybdate transporter substrate-binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, MerR; molybdenum-pterin-binding protein complement(6034246..6034659) Pseudonocardia dioxanivorans CB1190 10367513 YP_004335640.1 CDS Psed_5659 NC_015312.1 6034720 6035925 D manually curated; KEGG: fri:FraEuI1c_3837 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; (R)-benzylsuccinyl-CoA dehydrogenase 6034720..6035925 Pseudonocardia dioxanivorans CB1190 10367514 YP_004335641.1 CDS Psed_5660 NC_015312.1 6036015 6037187 D TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; Molybdenum cofactor synthesis C-terminal; KEGG: amd:AMED_8516 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 6036015..6037187 Pseudonocardia dioxanivorans CB1190 10367515 YP_004335642.1 CDS Psed_5661 NC_015312.1 6037202 6037474 D PFAM: ThiamineS; KEGG: mjl:Mjls_4861 thiamineS protein; sulfur carrier protein ThiS 6037202..6037474 Pseudonocardia dioxanivorans CB1190 10367516 YP_004335643.1 CDS Psed_5662 NC_015312.1 6037538 6038554 R PFAM: Peptidase S58, DmpA; KEGG: sco:SCO3193 hypothetical protein; peptidase S58 DmpA complement(6037538..6038554) Pseudonocardia dioxanivorans CB1190 10367517 YP_004335644.1 CDS Psed_5663 NC_015312.1 6038601 6039353 R KEGG: amd:AMED_7888 hypothetical protein; hypothetical protein complement(6038601..6039353) Pseudonocardia dioxanivorans CB1190 10367518 YP_004335645.1 CDS Psed_5664 NC_015312.1 6039395 6039883 R KEGG: sro:Sros_5448 hypothetical protein; hypothetical protein complement(6039395..6039883) Pseudonocardia dioxanivorans CB1190 10367519 YP_004335646.1 CDS Psed_5665 NC_015312.1 6039986 6040666 D KEGG: sro:Sros_2243 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6039986..6040666 Pseudonocardia dioxanivorans CB1190 10367520 YP_004335647.1 CDS Psed_5666 NC_015312.1 6040670 6041941 D KEGG: sro:Sros_2242 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; histidine kinase 6040670..6041941 Pseudonocardia dioxanivorans CB1190 10367521 YP_004335648.1 CDS Psed_5667 NC_015312.1 6042183 6042884 R KEGG: sma:SAV_6344 hypothetical protein; hypothetical protein complement(6042183..6042884) Pseudonocardia dioxanivorans CB1190 10367522 YP_004335649.1 CDS Psed_5668 NC_015312.1 6042881 6043093 R hypothetical protein complement(6042881..6043093) Pseudonocardia dioxanivorans CB1190 10367523 YP_004335650.1 CDS Psed_5669 NC_015312.1 6044220 6044843 R PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: kfl:Kfla_5825 superoxide dismutase; manganese/iron superoxide dismutase complement(6044220..6044843) Pseudonocardia dioxanivorans CB1190 10367524 YP_004335651.1 CDS Psed_5671 NC_015312.1 6045640 6046419 R PFAM: PASTA; KEGG: fri:FraEuI1c_0501 serine/threonine protein kinase with PASTA sensor(s); protein PASTA domain-containing protein complement(6045640..6046419) Pseudonocardia dioxanivorans CB1190 10367526 YP_004335652.1 CDS Psed_5672 NC_015312.1 6046813 6047190 D KEGG: amd:AMED_7281 hypothetical protein; hypothetical protein 6046813..6047190 Pseudonocardia dioxanivorans CB1190 10367527 YP_004335653.1 CDS Psed_5673 NC_015312.1 6047989 6048735 R PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: gob:Gobs_4922 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G complement(6047989..6048735) Pseudonocardia dioxanivorans CB1190 10367528 YP_004335654.1 CDS Psed_5674 NC_015312.1 6048854 6049705 R KEGG: sen:SACE_0538 carbon monoxide dehydrogenase medium subunit; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase complement(6048854..6049705) Pseudonocardia dioxanivorans CB1190 10367529 YP_004335655.1 CDS Psed_5675 NC_015312.1 6049702 6052179 R KEGG: amd:AMED_1871 carbon-monoxide dehydrogenase large subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(6049702..6052179) Pseudonocardia dioxanivorans CB1190 10367530 YP_004335656.1 CDS Psed_5676 NC_015312.1 6052181 6052696 R KEGG: svi:Svir_13110 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(6052181..6052696) Pseudonocardia dioxanivorans CB1190 10367531 YP_004335657.1 CDS Psed_5677 NC_015312.1 6052965 6054479 R PFAM: Glycosyl transferase, family 2; KEGG: gob:Gobs_4928 family 2 glycosyl transferase; family 2 glycosyl transferase complement(6052965..6054479) Pseudonocardia dioxanivorans CB1190 10367532 YP_004335658.1 CDS Psed_5678 NC_015312.1 6054558 6055703 D PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: nfa:nfa26840 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 6054558..6055703 Pseudonocardia dioxanivorans CB1190 10367533 YP_004335659.1 CDS Psed_5679 NC_015312.1 6055810 6056535 R PFAM: Creatininase; KEGG: rop:ROP_61350 creatininase protein; creatininase complement(6055810..6056535) Pseudonocardia dioxanivorans CB1190 10367534 YP_004335660.1 CDS Psed_5680 NC_015312.1 6056545 6060399 R KEGG: fal:FRAAL4319 hypothetical protein; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 2,4-dienoyl-CoA reductase complement(6056545..6060399) Pseudonocardia dioxanivorans CB1190 10367535 YP_004335661.1 CDS Psed_5681 NC_015312.1 6060455 6061687 R KEGG: rha:RHA1_ro06072 coenzyme synthesis protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein complement(6060455..6061687) Pseudonocardia dioxanivorans CB1190 10367536 YP_004335662.1 CDS Psed_5682 NC_015312.1 6061700 6062008 R KEGG: nfa:nfa34420 hypothetical protein; hypothetical protein complement(6061700..6062008) Pseudonocardia dioxanivorans CB1190 10367537 YP_004335663.1 CDS Psed_5683 NC_015312.1 6061998 6062105 R hypothetical protein complement(6061998..6062105) Pseudonocardia dioxanivorans CB1190 10367538 YP_004335664.1 CDS Psed_5684 NC_015312.1 6062263 6063411 D PFAM: Protein of unknown function DUF952; GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gob:Gobs_3986 hypothetical protein; hypothetical protein 6062263..6063411 Pseudonocardia dioxanivorans CB1190 10367539 YP_004335665.1 CDS Psed_5685 NC_015312.1 6063500 6064480 D KEGG: fri:FraEuI1c_5323 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-hydroxyacyl-CoA dehydrogenase 6063500..6064480 Pseudonocardia dioxanivorans CB1190 10367540 YP_004335666.1 CDS Psed_5686 NC_015312.1 6064493 6065251 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_24720 oxidoreductase; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(6064493..6065251) Pseudonocardia dioxanivorans CB1190 10367541 YP_004335667.1 CDS Psed_5687 NC_015312.1 6065248 6067200 R KEGG: mil:ML5_4663 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 2,4-dienoyl-CoA reductase complement(6065248..6067200) Pseudonocardia dioxanivorans CB1190 10367542 YP_004335668.1 CDS Psed_5688 NC_015312.1 6067374 6068132 R KEGG: amd:AMED_5932 hypothetical protein; hypothetical protein complement(6067374..6068132) Pseudonocardia dioxanivorans CB1190 10367543 YP_004335669.1 CDS Psed_5689 NC_015312.1 6068277 6069500 R PFAM: ATPase-like, ATP-binding domain; KEGG: rop:ROP_04120 two-component histidine kinase; histidine kinase complement(6068277..6069500) Pseudonocardia dioxanivorans CB1190 10367544 YP_004335670.1 CDS Psed_5690 NC_015312.1 6069569 6070216 D KEGG: nml:Namu_0487 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6069569..6070216 Pseudonocardia dioxanivorans CB1190 10367545 YP_004335671.1 CDS Psed_5691 NC_015312.1 6070232 6071050 R PFAM: Glycoside hydrolase, family 16; KEGG: mil:ML5_5027 glycoside hydrolase 16; glycoside hydrolase protein complement(6070232..6071050) Pseudonocardia dioxanivorans CB1190 10367546 YP_004335672.1 CDS Psed_5692 NC_015312.1 6071047 6071814 R PFAM: Polysaccharide deacetylase; KEGG: amd:AMED_1392 predicted xylanase/chitin deacetylase; polysaccharide deacetylase complement(6071047..6071814) Pseudonocardia dioxanivorans CB1190 10367547 YP_004335673.1 CDS Psed_5693 NC_015312.1 6071814 6071966 R hypothetical protein complement(6071814..6071966) Pseudonocardia dioxanivorans CB1190 10367548 YP_004335674.1 CDS Psed_5694 NC_015312.1 6072054 6073589 R PFAM: Glycosyl transferase, family 2; KEGG: art:Arth_3658 glycosyl transferase protein; family 2 glycosyl transferase complement(6072054..6073589) Pseudonocardia dioxanivorans CB1190 10367549 YP_004335675.1 CDS Psed_5695 NC_015312.1 6073913 6074224 R hypothetical protein complement(6073913..6074224) Pseudonocardia dioxanivorans CB1190 10367550 YP_004335676.1 CDS Psed_5696 NC_015312.1 6074420 6074935 R PFAM: Peptidoglycan binding-like; peptidoglycan-binding domain 1 protein complement(6074420..6074935) Pseudonocardia dioxanivorans CB1190 10367551 YP_004335677.1 CDS Psed_5697 NC_015312.1 6075239 6076054 R KEGG: gob:Gobs_4663 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase complement(6075239..6076054) Pseudonocardia dioxanivorans CB1190 10367552 YP_004335678.1 CDS Psed_5698 NC_015312.1 6076051 6076617 R KEGG: gob:Gobs_4664 (2Fe-2S)-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(6076051..6076617) Pseudonocardia dioxanivorans CB1190 10367553 YP_004335679.1 CDS Psed_5699 NC_015312.1 6076614 6078884 R KEGG: gob:Gobs_4665 aldehyde oxidase/xanthine dehydrogenase; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(6076614..6078884) Pseudonocardia dioxanivorans CB1190 10367554 YP_004335680.1 CDS Psed_5700 NC_015312.1 6079114 6079947 R PFAM: Phosphomethylpyrimidine kinase type-1; manually curated; KEGG: ami:Amir_0424 phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2; phosphomethylpyrimidine kinase complement(6079114..6079947) Pseudonocardia dioxanivorans CB1190 10367555 YP_004335681.1 CDS Psed_5701 NC_015312.1 6080276 6080710 D KEGG: mav:MAV_0120 hypothetical protein; hypothetical protein 6080276..6080710 Pseudonocardia dioxanivorans CB1190 10367556 YP_004335682.1 CDS Psed_5702 NC_015312.1 6080780 6083023 R PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: ami:Amir_4048 protein of unknown function DUF214; hypothetical protein complement(6080780..6083023) Pseudonocardia dioxanivorans CB1190 10367557 YP_004335683.1 CDS Psed_5703 NC_015312.1 6083020 6083760 R PFAM: ABC transporter-like; KEGG: kfl:Kfla_5714 ABC transporter related protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(6083020..6083760) Pseudonocardia dioxanivorans CB1190 10367558 YP_004335684.1 CDS Psed_5704 NC_015312.1 6083757 6083867 R hypothetical protein complement(6083757..6083867) Pseudonocardia dioxanivorans CB1190 10367559 YP_004335685.1 CDS Psed_5705 NC_015312.1 6083988 6085148 D PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: ami:Amir_4000 histidine kinase; histidine kinase 6083988..6085148 Pseudonocardia dioxanivorans CB1190 10367560 YP_004335686.1 CDS Psed_5706 NC_015312.1 6085171 6085806 D KEGG: sro:Sros_7377 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6085171..6085806 Pseudonocardia dioxanivorans CB1190 10367561 YP_004335687.1 CDS Psed_5707 NC_015312.1 6085845 6086744 R KEGG: amd:AMED_8570 serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap complement(6085845..6086744) Pseudonocardia dioxanivorans CB1190 10367562 YP_004335688.1 CDS Psed_5708 NC_015312.1 6086810 6087382 R PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: sen:SACE_0514 polypeptide deformylase; peptide deformylase complement(6086810..6087382) Pseudonocardia dioxanivorans CB1190 10367563 YP_004335689.1 CDS Psed_5709 NC_015312.1 6087637 6087942 D KEGG: gbr:Gbro_0662 hypothetical protein; hypothetical protein 6087637..6087942 Pseudonocardia dioxanivorans CB1190 10367564 YP_004335690.1 CDS Psed_5710 NC_015312.1 6088000 6088695 D KEGG: amd:AMED_8566 hypothetical protein; hypothetical protein 6088000..6088695 Pseudonocardia dioxanivorans CB1190 10367565 YP_004335691.1 CDS Psed_5711 NC_015312.1 6088781 6091189 R PFAM: ATPase, AAA-type, core; KEGG: ami:Amir_0432 microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; Microtubule-severing ATPase complement(6088781..6091189) Pseudonocardia dioxanivorans CB1190 10367566 YP_004335692.1 CDS Psed_5712 NC_015312.1 6091258 6092244 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: amd:AMED_8564 phosphatidylserine synthase; CDP-alcohol phosphatidyltransferase complement(6091258..6092244) Pseudonocardia dioxanivorans CB1190 10367567 YP_004335693.1 CDS Psed_5713 NC_015312.1 6092241 6092963 R PFAM: Phosphatidylserine decarboxylase-related; TIGRFAM: Phosphatidylserine decarboxylase-related protein; HAMAP: Phosphatidylserine decarboxylase-related protein; KEGG: amd:AMED_8563 phosphatidylserine decarboxylase; phosphatidylserine decarboxylase proenzyme complement(6092241..6092963) Pseudonocardia dioxanivorans CB1190 10367568 YP_004335694.1 CDS Psed_5714 NC_015312.1 6093399 6094640 R TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; KEGG: ami:Amir_0438 molybdenum cofactor synthesis domain protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein complement(6093399..6094640) Pseudonocardia dioxanivorans CB1190 10367569 YP_004335695.1 CDS Psed_5715 NC_015312.1 6094748 6094951 D KEGG: ami:Amir_0440 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 6094748..6094951 Pseudonocardia dioxanivorans CB1190 10367570 YP_004335696.1 CDS Psed_5716 NC_015312.1 6095242 6096870 D TIGRFAM: Chaperonin Cpn60; HAMAP: Chaperonin Cpn60; KEGG: nml:Namu_4827 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 6095242..6096870 Pseudonocardia dioxanivorans CB1190 10367571 YP_004335697.1 CDS Psed_5717 NC_015312.1 6097013 6097960 R KEGG: rop:ROP_43410 DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(6097013..6097960) Pseudonocardia dioxanivorans CB1190 10367572 YP_004335698.1 CDS Psed_5718 NC_015312.1 6098023 6098613 D TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: rop:ROP_43400 hypothetical protein; hypothetical protein 6098023..6098613 Pseudonocardia dioxanivorans CB1190 10367573 YP_004335699.1 CDS Psed_5719 NC_015312.1 6098815 6100050 D PFAM: Low temperature requirement A; KEGG: rha:RHA1_ro04267 low temperature requirement protein A; low temperature requirement A 6098815..6100050 Pseudonocardia dioxanivorans CB1190 10367574 YP_004335700.1 CDS Psed_5720 NC_015312.1 6100077 6100376 R PFAM: Phage shock domain; KEGG: ami:Amir_0450 phage shock protein C, PspC; phage shock protein C, PspC complement(6100077..6100376) Pseudonocardia dioxanivorans CB1190 10367575 YP_004335701.1 CDS Psed_5721 NC_015312.1 6100462 6100791 R hypothetical protein complement(6100462..6100791) Pseudonocardia dioxanivorans CB1190 10367576 YP_004335702.1 CDS Psed_5722 NC_015312.1 6100910 6101155 R hypothetical protein complement(6100910..6101155) Pseudonocardia dioxanivorans CB1190 10367577 YP_004335703.1 CDS Psed_5723 NC_015312.1 6101253 6102914 R KEGG: sen:SACE_0545 ATP-dependent DNA helicase; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; type III restriction protein res subunit complement(6101253..6102914) Pseudonocardia dioxanivorans CB1190 10367578 YP_004335704.1 CDS Psed_5724 NC_015312.1 6103391 6108727 D KEGG: amd:AMED_2491 histidine kinase-like ATPase containing nitrate/nitrite sensor domain; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; histidine kinase 6103391..6108727 Pseudonocardia dioxanivorans CB1190 10367579 YP_004335705.1 CDS Psed_5725 NC_015312.1 6108724 6109146 D KEGG: svi:Svir_24600 hypothetical protein; PFAM: Dynein light chain-related; SMART: Dynein light chain-related; Roadblock/LC7 family protein 6108724..6109146 Pseudonocardia dioxanivorans CB1190 10367580 YP_004335706.1 CDS Psed_5726 NC_015312.1 6109223 6110143 D PFAM: Protein of unknown function DUF742; KEGG: sen:SACE_0559 hypothetical protein; hypothetical protein 6109223..6110143 Pseudonocardia dioxanivorans CB1190 10367581 YP_004335707.1 CDS Psed_5727 NC_015312.1 6110124 6110720 D PFAM: Uncharacterised protein family, ATP binding; KEGG: ami:Amir_0461 protein of unknown function ATP binding; hypothetical protein 6110124..6110720 Pseudonocardia dioxanivorans CB1190 10367582 YP_004335708.1 CDS Psed_5728 NC_015312.1 6110753 6111343 R manually curated; KEGG: tcu:Tcur_2634 hypothetical protein; hypothetical protein complement(6110753..6111343) Pseudonocardia dioxanivorans CB1190 10367583 YP_004335709.1 CDS Psed_5729 NC_015312.1 6111340 6113592 R KEGG: sen:SACE_0561 hypothetical protein; hypothetical protein complement(6111340..6113592) Pseudonocardia dioxanivorans CB1190 10367584 YP_004335710.1 CDS Psed_5730 NC_015312.1 6113699 6113878 D KEGG: sen:SACE_0562 hypothetical protein; hypothetical protein 6113699..6113878 Pseudonocardia dioxanivorans CB1190 10367585 YP_004335711.1 CDS Psed_5731 NC_015312.1 6113880 6114476 D KEGG: amd:AMED_1865 hypothetical protein; hypothetical protein 6113880..6114476 Pseudonocardia dioxanivorans CB1190 10367586 YP_004335712.1 CDS Psed_5732 NC_015312.1 6114548 6115249 R PFAM: Transglycosylase-like; Peptidoglycan-binding lysin domain; KEGG: amd:AMED_8518 secreted protein; transglycosylase-like domain-containing protein complement(6114548..6115249) Pseudonocardia dioxanivorans CB1190 10367587 YP_004335713.1 CDS Psed_5733 NC_015312.1 6115690 6116169 D KEGG: sen:SACE_0564 molybdenum cofactor biosynthesis protein; TIGRFAM: Molybdenum cofactor biosynthesis C; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain; molybdenum cofactor biosynthesis protein C 6115690..6116169 Pseudonocardia dioxanivorans CB1190 10367588 YP_004335714.1 CDS Psed_5734 NC_015312.1 6116166 6116654 D TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: ami:Amir_0467 molybdenum cofactor synthesis domain protein; SMART: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 6116166..6116654 Pseudonocardia dioxanivorans CB1190 10367589 YP_004335715.1 CDS Psed_5735 NC_015312.1 6116654 6117082 D PFAM: Molybdopterin biosynthesis MoaE; KEGG: ami:Amir_0468 molybdopterin biosynthesis MoaE protein; molybdopterin biosynthesis MoaE protein 6116654..6117082 Pseudonocardia dioxanivorans CB1190 10367590 YP_004335716.1 CDS Psed_5736 NC_015312.1 6117189 6117797 R KEGG: rsa:RSal33209_2532 transglycosylase protein; PFAM: Transglycosylase-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; transglycosylase-like domain-containing protein complement(6117189..6117797) Pseudonocardia dioxanivorans CB1190 10367591 YP_004335717.1 CDS Psed_5737 NC_015312.1 6118355 6119257 D KEGG: rop:ROP_50460 hypothetical protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 6118355..6119257 Pseudonocardia dioxanivorans CB1190 10367592 YP_004335718.1 CDS Psed_5738 NC_015312.1 6119275 6120423 D KEGG: svi:Svir_13090 protein containing von Willebrand factor type A (vWA) domain protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A; von Willebrand factor A 6119275..6120423 Pseudonocardia dioxanivorans CB1190 10367593 YP_004335719.1 CDS Psed_5739 NC_015312.1 6120416 6121543 D PFAM: XdhC- CoxI; KEGG: gob:Gobs_4952 hypothetical protein; XshC-Cox1-family protein 6120416..6121543 Pseudonocardia dioxanivorans CB1190 10367594 YP_004335720.1 CDS Psed_5740 NC_015312.1 6121566 6122600 R KEGG: nca:Noca_1906 hypothetical protein; PFAM: GerMN domain; Spore germination protein-like Gmad2, bacteria; SMART: GerMN domain; lipoprotein LpqB, GerMN domain-containing protein complement(6121566..6122600) Pseudonocardia dioxanivorans CB1190 10367595 YP_004335721.1 CDS Psed_5741 NC_015312.1 6122606 6123154 D KEGG: gob:Gobs_2268 hypothetical protein; hypothetical protein 6122606..6123154 Pseudonocardia dioxanivorans CB1190 10367596 YP_004335722.1 CDS Psed_5742 NC_015312.1 6123170 6123940 R KEGG: sen:SACE_0508 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis; thiazole synthase complement(6123170..6123940) Pseudonocardia dioxanivorans CB1190 10367597 YP_004335723.1 CDS Psed_5743 NC_015312.1 6123946 6124146 R KEGG: sro:Sros_2782 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS; thiamine biosynthesis protein ThiS complement(6123946..6124146) Pseudonocardia dioxanivorans CB1190 10367598 YP_004335724.1 CDS Psed_5744 NC_015312.1 6124143 6125288 R KEGG: sen:SACE_0506 amino acid oxidase flavoprotein ThiO, TIGRFAM: Glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; glycine oxidase ThiO complement(6124143..6125288) Pseudonocardia dioxanivorans CB1190 10367599 YP_004335725.1 CDS Psed_5745 NC_015312.1 6125420 6126085 D PFAM: Thiamine monophosphate synthase; TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine monophosphate synthase; KEGG: amd:AMED_8579 thiamine-phosphate pyrophosphorylase; thiamine-phosphate pyrophosphorylase 6125420..6126085 Pseudonocardia dioxanivorans CB1190 10367600 YP_004335726.1 CDS Psed_5746 NC_015312.1 6126119 6127147 R KEGG: gob:Gobs_1366 hypothetical protein; hypothetical protein complement(6126119..6127147) Pseudonocardia dioxanivorans CB1190 10367601 YP_004335727.1 CDS Psed_5747 NC_015312.1 6128032 6128298 D hypothetical protein 6128032..6128298 Pseudonocardia dioxanivorans CB1190 10367602 YP_004335728.1 CDS Psed_5748 NC_015312.1 6128378 6128794 D hypothetical protein 6128378..6128794 Pseudonocardia dioxanivorans CB1190 10367603 YP_004335729.1 CDS Psed_5749 NC_015312.1 6128791 6129003 D hypothetical protein 6128791..6129003 Pseudonocardia dioxanivorans CB1190 10367604 YP_004335730.1 CDS Psed_5750 NC_015312.1 6129000 6129410 D hypothetical protein 6129000..6129410 Pseudonocardia dioxanivorans CB1190 10367605 YP_004335731.1 CDS Psed_5751 NC_015312.1 6129410 6129919 D hypothetical protein 6129410..6129919 Pseudonocardia dioxanivorans CB1190 10367606 YP_004335732.1 CDS Psed_5752 NC_015312.1 6129916 6130440 D KEGG: eba:ebA7261 hypothetical protein; hypothetical protein 6129916..6130440 Pseudonocardia dioxanivorans CB1190 10367607 YP_004335733.1 CDS Psed_5753 NC_015312.1 6130437 6131288 D hypothetical protein 6130437..6131288 Pseudonocardia dioxanivorans CB1190 10367608 YP_004335734.1 CDS Psed_5754 NC_015312.1 6131285 6131596 D hypothetical protein 6131285..6131596 Pseudonocardia dioxanivorans CB1190 10367609 YP_004335735.1 CDS Psed_5755 NC_015312.1 6131635 6132636 D hypothetical protein 6131635..6132636 Pseudonocardia dioxanivorans CB1190 10367610 YP_004335736.1 CDS Psed_5756 NC_015312.1 6132694 6132927 D hypothetical protein 6132694..6132927 Pseudonocardia dioxanivorans CB1190 10367611 YP_004335737.1 CDS Psed_5757 NC_015312.1 6133127 6133744 D hypothetical protein 6133127..6133744 Pseudonocardia dioxanivorans CB1190 10367612 YP_004335738.1 CDS Psed_5758 NC_015312.1 6133741 6134133 D hypothetical protein 6133741..6134133 Pseudonocardia dioxanivorans CB1190 10367613 YP_004335739.1 CDS Psed_5759 NC_015312.1 6134133 6134378 D hypothetical protein 6134133..6134378 Pseudonocardia dioxanivorans CB1190 10367614 YP_004335740.1 CDS Psed_5760 NC_015312.1 6134375 6134683 D hypothetical protein 6134375..6134683 Pseudonocardia dioxanivorans CB1190 10367615 YP_004335741.1 CDS Psed_5761 NC_015312.1 6134680 6134976 D hypothetical protein 6134680..6134976 Pseudonocardia dioxanivorans CB1190 10367616 YP_004335742.1 CDS Psed_5762 NC_015312.1 6134973 6135272 D hypothetical protein 6134973..6135272 Pseudonocardia dioxanivorans CB1190 10367617 YP_004335743.1 CDS Psed_5763 NC_015312.1 6135269 6135808 D KEGG: car:cauri_1937 hypothetical protein; hypothetical protein 6135269..6135808 Pseudonocardia dioxanivorans CB1190 10367618 YP_004335744.1 CDS Psed_5764 NC_015312.1 6135805 6136305 D hypothetical protein 6135805..6136305 Pseudonocardia dioxanivorans CB1190 10367619 YP_004335745.1 CDS Psed_5765 NC_015312.1 6136302 6137036 D hypothetical protein 6136302..6137036 Pseudonocardia dioxanivorans CB1190 10367620 YP_004335746.1 CDS Psed_5766 NC_015312.1 6137033 6137335 D hypothetical protein 6137033..6137335 Pseudonocardia dioxanivorans CB1190 10367621 YP_004335747.1 CDS Psed_5767 NC_015312.1 6137337 6137603 D hypothetical protein 6137337..6137603 Pseudonocardia dioxanivorans CB1190 10367622 YP_004335748.1 CDS Psed_5768 NC_015312.1 6137600 6138127 D hypothetical protein 6137600..6138127 Pseudonocardia dioxanivorans CB1190 10367623 YP_004335749.1 CDS Psed_5769 NC_015312.1 6138311 6139207 D hypothetical protein 6138311..6139207 Pseudonocardia dioxanivorans CB1190 10367624 YP_004335750.1 CDS Psed_5770 NC_015312.1 6139204 6139572 D hypothetical protein 6139204..6139572 Pseudonocardia dioxanivorans CB1190 10367625 YP_004335751.1 CDS Psed_5771 NC_015312.1 6139576 6140112 R KEGG: cyp:PCC8801_3065 hypothetical protein; hypothetical protein complement(6139576..6140112) Pseudonocardia dioxanivorans CB1190 10367626 YP_004335752.1 CDS Psed_5772 NC_015312.1 6140090 6141121 R KEGG: cyp:PCC8801_3064 hypothetical protein; hypothetical protein complement(6140090..6141121) Pseudonocardia dioxanivorans CB1190 10367627 YP_004335753.1 CDS Psed_5773 NC_015312.1 6141276 6141566 R hypothetical protein complement(6141276..6141566) Pseudonocardia dioxanivorans CB1190 10367628 YP_004335754.1 CDS Psed_5774 NC_015312.1 6141647 6141925 D hypothetical protein 6141647..6141925 Pseudonocardia dioxanivorans CB1190 10367629 YP_004335755.1 CDS Psed_5775 NC_015312.1 6142047 6142151 D hypothetical protein 6142047..6142151 Pseudonocardia dioxanivorans CB1190 10367630 YP_004335756.1 CDS Psed_5776 NC_015312.1 6142148 6142933 D KEGG: kfl:Kfla_3342 hypothetical protein; hypothetical protein 6142148..6142933 Pseudonocardia dioxanivorans CB1190 10367631 YP_004335757.1 CDS Psed_5777 NC_015312.1 6142930 6143229 D hypothetical protein 6142930..6143229 Pseudonocardia dioxanivorans CB1190 10367632 YP_004335758.1 CDS Psed_5778 NC_015312.1 6143193 6145211 D PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fre:Franean1_1448 cell divisionFtsK/SpoIIIE; DNA translocase FtsK 6143193..6145211 Pseudonocardia dioxanivorans CB1190 10367633 YP_004335759.1 CDS Psed_5779 NC_015312.1 6145208 6145465 D KEGG: kfl:Kfla_0389 hypothetical protein; hypothetical protein 6145208..6145465 Pseudonocardia dioxanivorans CB1190 10367634 YP_004335760.1 CDS Psed_5780 NC_015312.1 6145567 6145971 D KEGG: scb:SCAB_48371 hypothetical protein; hypothetical protein 6145567..6145971 Pseudonocardia dioxanivorans CB1190 10367635 YP_004335761.1 CDS Psed_5781 NC_015312.1 6145968 6146162 D hypothetical protein 6145968..6146162 Pseudonocardia dioxanivorans CB1190 10367636 YP_004335762.1 CDS Psed_5782 NC_015312.1 6146836 6147840 D PFAM: Collagen triple helix repeat; KEGG: mno:Mnod_2610 collagen triple helix repeat protein; collagen triple helix repeat-containing protein 6146836..6147840 Pseudonocardia dioxanivorans CB1190 10367637 YP_004335763.1 CDS Psed_5783 NC_015312.1 6147840 6148406 D KEGG: cwo:Cwoe_0556 carbohydrate-binding CenC domain protein; hypothetical protein 6147840..6148406 Pseudonocardia dioxanivorans CB1190 10367638 YP_004335764.1 CDS Psed_5784 NC_015312.1 6148406 6148720 D KEGG: mva:Mvan_3608 hypothetical protein; hypothetical protein 6148406..6148720 Pseudonocardia dioxanivorans CB1190 10367639 YP_004335765.1 CDS Psed_5785 NC_015312.1 6149097 6149621 D KEGG: stp:Strop_1047 hypothetical protein; hypothetical protein 6149097..6149621 Pseudonocardia dioxanivorans CB1190 10367640 YP_004335766.1 CDS Psed_5786 NC_015312.1 6149560 6151134 D KEGG: scb:SCAB_48281 phage terminase; phage terminase 6149560..6151134 Pseudonocardia dioxanivorans CB1190 10367641 YP_004335767.1 CDS Psed_5787 NC_015312.1 6151154 6152407 D KEGG: cef:CE0842 hypothetical protein; hypothetical protein 6151154..6152407 Pseudonocardia dioxanivorans CB1190 10367642 YP_004335768.1 CDS Psed_5788 NC_015312.1 6152404 6153705 D PFAM: Peptidase S14, ClpP; KEGG: ppr:PBPRB1287 hypothetical protein; peptidase S14 ClpP 6152404..6153705 Pseudonocardia dioxanivorans CB1190 10367643 YP_004335769.1 CDS Psed_5789 NC_015312.1 6153709 6154080 D KEGG: lxx:Lxx03890 hypothetical protein; hypothetical protein 6153709..6154080 Pseudonocardia dioxanivorans CB1190 10367644 YP_004335770.1 CDS Psed_5790 NC_015312.1 6154093 6155016 D KEGG: lxx:Lxx03880 hypothetical protein; hypothetical protein 6154093..6155016 Pseudonocardia dioxanivorans CB1190 10367645 YP_004335771.1 CDS Psed_5791 NC_015312.1 6155016 6155330 D KEGG: mav:MAV_0808 hypothetical protein; hypothetical protein 6155016..6155330 Pseudonocardia dioxanivorans CB1190 10367646 YP_004335772.1 CDS Psed_5792 NC_015312.1 6155340 6155786 D hypothetical protein 6155340..6155786 Pseudonocardia dioxanivorans CB1190 10367647 YP_004335773.1 CDS Psed_5793 NC_015312.1 6155783 6156262 D hypothetical protein 6155783..6156262 Pseudonocardia dioxanivorans CB1190 10367648 YP_004335774.1 CDS Psed_5794 NC_015312.1 6156332 6156517 D hypothetical protein 6156332..6156517 Pseudonocardia dioxanivorans CB1190 10367649 YP_004335775.1 CDS Psed_5795 NC_015312.1 6156521 6157015 D hypothetical protein 6156521..6157015 Pseudonocardia dioxanivorans CB1190 10367650 YP_004335776.1 CDS Psed_5796 NC_015312.1 6157017 6157391 D hypothetical protein 6157017..6157391 Pseudonocardia dioxanivorans CB1190 10367651 YP_004335777.1 CDS Psed_5797 NC_015312.1 6157418 6157723 D hypothetical protein 6157418..6157723 Pseudonocardia dioxanivorans CB1190 10367652 YP_004335778.1 CDS Psed_5798 NC_015312.1 6157737 6158234 D hypothetical protein 6157737..6158234 Pseudonocardia dioxanivorans CB1190 10367653 YP_004335779.1 CDS Psed_5799 NC_015312.1 6158240 6158635 D hypothetical protein 6158240..6158635 Pseudonocardia dioxanivorans CB1190 10367654 YP_004335780.1 CDS Psed_5800 NC_015312.1 6158755 6163197 D KEGG: srt:Srot_0075 hypothetical protein; hypothetical protein 6158755..6163197 Pseudonocardia dioxanivorans CB1190 10367655 YP_004335781.1 CDS Psed_5801 NC_015312.1 6163243 6163659 D hypothetical protein 6163243..6163659 Pseudonocardia dioxanivorans CB1190 10367656 YP_004335782.1 CDS Psed_5802 NC_015312.1 6163663 6165327 D hypothetical protein 6163663..6165327 Pseudonocardia dioxanivorans CB1190 10367657 YP_004335783.1 CDS Psed_5803 NC_015312.1 6165359 6165703 D hypothetical protein 6165359..6165703 Pseudonocardia dioxanivorans CB1190 10367658 YP_004335784.1 CDS Psed_5804 NC_015312.1 6165706 6166113 D KEGG: rer:RER_25240 hypothetical protein; hypothetical protein 6165706..6166113 Pseudonocardia dioxanivorans CB1190 10367659 YP_004335785.1 CDS Psed_5805 NC_015312.1 6166161 6168647 D KEGG: dwi:Dwil_GK24884 GK24884 gene product from transcript GK24884-RA; hypothetical protein 6166161..6168647 Pseudonocardia dioxanivorans CB1190 10367660 YP_004335786.1 CDS Psed_5808 NC_015312.1 6169648 6169965 D hypothetical protein 6169648..6169965 Pseudonocardia dioxanivorans CB1190 10367663 YP_004335787.1 CDS Psed_5809 NC_015312.1 6169962 6170063 D hypothetical protein 6169962..6170063 Pseudonocardia dioxanivorans CB1190 10367664 YP_004335788.1 CDS Psed_5810 NC_015312.1 6170060 6170224 D hypothetical protein 6170060..6170224 Pseudonocardia dioxanivorans CB1190 10367665 YP_004335789.1 CDS Psed_5811 NC_015312.1 6170288 6170572 D hypothetical protein 6170288..6170572 Pseudonocardia dioxanivorans CB1190 10367666 YP_004335790.1 CDS Psed_5812 NC_015312.1 6170614 6171255 D KEGG: sca:Sca_1292a glycine-rich cell wall surface anchor protein; hypothetical protein 6170614..6171255 Pseudonocardia dioxanivorans CB1190 10367667 YP_004335791.1 CDS Psed_5813 NC_015312.1 6171252 6171518 D hypothetical protein 6171252..6171518 Pseudonocardia dioxanivorans CB1190 10367668 YP_004335792.1 CDS Psed_5814 NC_015312.1 6171505 6172299 D KEGG: mar:MAE_16090 hypothetical protein; hypothetical protein 6171505..6172299 Pseudonocardia dioxanivorans CB1190 10367669 YP_004335793.1 CDS Psed_5815 NC_015312.1 6172302 6172556 D hypothetical protein 6172302..6172556 Pseudonocardia dioxanivorans CB1190 10367670 YP_004335794.1 CDS Psed_5816 NC_015312.1 6172635 6172934 R hypothetical protein complement(6172635..6172934) Pseudonocardia dioxanivorans CB1190 10367671 YP_004335795.1 CDS Psed_5817 NC_015312.1 6172986 6173168 R hypothetical protein complement(6172986..6173168) Pseudonocardia dioxanivorans CB1190 10367672 YP_004335796.1 CDS Psed_5818 NC_015312.1 6173165 6173362 R hypothetical protein complement(6173165..6173362) Pseudonocardia dioxanivorans CB1190 10367673 YP_004335797.1 CDS Psed_5819 NC_015312.1 6173529 6173729 D PFAM: HTH transcriptional regulator, MerR; regulatory protein MerR 6173529..6173729 Pseudonocardia dioxanivorans CB1190 10367674 YP_004335798.1 CDS Psed_5820 NC_015312.1 6173735 6174520 R PFAM: Integrase, catalytic core, phage; KEGG: nfa:nfa15600 phage integrase; integrase protein complement(6173735..6174520) Pseudonocardia dioxanivorans CB1190 10367675 YP_004335799.1 CDS Psed_5821 NC_015312.1 6174888 6175583 R KEGG: stp:Strop_2956 hypothetical protein; hypothetical protein complement(6174888..6175583) Pseudonocardia dioxanivorans CB1190 10367676 YP_004335800.1 CDS Psed_5822 NC_015312.1 6175748 6176548 D PFAM: Lipase, GDSL; KEGG: svi:Svir_34730 lysophospholipase L1-like esterase; G-D-S-L family lipolytic protein 6175748..6176548 Pseudonocardia dioxanivorans CB1190 10367677 YP_004335801.1 CDS Psed_5823 NC_015312.1 6176604 6177515 R KEGG: sen:SACE_0486 ectoine hydroxylase; TIGRFAM: Ectoine hydroxylase; PFAM: Phytanoyl-CoA dioxygenase; ectoine hydroxylase complement(6176604..6177515) Pseudonocardia dioxanivorans CB1190 10367678 YP_004335802.1 CDS Psed_5824 NC_015312.1 6177516 6177968 R HAMAP: L-ectoine synthase; KEGG: svi:Svir_34790 L-ectoine synthase; PFAM: Ectoine synthase; L-ectoine synthase complement(6177516..6177968) Pseudonocardia dioxanivorans CB1190 10367679 YP_004335803.1 CDS Psed_5825 NC_015312.1 6177971 6179368 R TIGRFAM: Diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-2-oxoglutarate transaminase; KEGG: amd:AMED_8596 diaminobutyrate-2-oxoglutarate transaminase; PFAM: Aminotransferase class-III; diaminobutyrate/2-oxoglutarate aminotransferase complement(6177971..6179368) Pseudonocardia dioxanivorans CB1190 10367680 YP_004335804.1 CDS Psed_5826 NC_015312.1 6179564 6180094 R TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; KEGG: sco:SCO1864 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; L-2,4-diaminobutyric acid acetyltransferase complement(6179564..6180094) Pseudonocardia dioxanivorans CB1190 10367681 YP_004335805.1 CDS Psed_5827 NC_015312.1 6180316 6181917 R KEGG: mno:Mnod_3429 FAD dependent oxidoreductase; PFAM: Lycopene cyclase-type, FAD-binding; phenylacetone monooxygenase complement(6180316..6181917) Pseudonocardia dioxanivorans CB1190 10367682 YP_004335806.1 CDS Psed_5829 NC_015312.1 6182447 6182920 R PFAM: Protein of unknown function DUF307; KEGG: amd:AMED_8507 hypothetical protein; hypothetical protein complement(6182447..6182920) Pseudonocardia dioxanivorans CB1190 10367684 YP_004335807.1 CDS Psed_5830 NC_015312.1 6183003 6183800 D PFAM: Protein of unknown function DUF347; KEGG: cai:Caci_8898 protein of unknown function DUF347; hypothetical protein 6183003..6183800 Pseudonocardia dioxanivorans CB1190 10367685 YP_004335808.1 CDS Psed_5831 NC_015312.1 6183840 6184316 R hypothetical protein complement(6183840..6184316) Pseudonocardia dioxanivorans CB1190 10367686 YP_004335809.1 CDS Psed_5832 NC_015312.1 6184647 6184856 D KEGG: fri:FraEuI1c_6484 protein of unknown function DUF2945; hypothetical protein 6184647..6184856 Pseudonocardia dioxanivorans CB1190 10367687 YP_004335810.1 CDS Psed_5833 NC_015312.1 6184922 6185329 D PFAM: Protein of unknown function DUF427; KEGG: msp:Mspyr1_50770 hypothetical protein; hypothetical protein 6184922..6185329 Pseudonocardia dioxanivorans CB1190 10367688 YP_004335811.1 CDS Psed_5834 NC_015312.1 6185495 6186649 D PFAM: Phosphate transporter; KEGG: cai:Caci_5449 phosphate transporter; phosphate transporter 6185495..6186649 Pseudonocardia dioxanivorans CB1190 10367689 YP_004335812.1 CDS Psed_5835 NC_015312.1 6186661 6186903 D KEGG: cai:Caci_5448 hypothetical protein; hypothetical protein 6186661..6186903 Pseudonocardia dioxanivorans CB1190 10367690 YP_004335813.1 CDS Psed_5836 NC_015312.1 6186943 6187239 D KEGG: fal:FRAAL1463 hypothetical protein; hypothetical protein 6186943..6187239 Pseudonocardia dioxanivorans CB1190 10367691 YP_004335814.1 CDS Psed_5837 NC_015312.1 6187518 6188711 D KEGG: sma:SAV_7212 FMNH2-utilizing oxygenase; FMNH2-utilizing oxygenase 6187518..6188711 Pseudonocardia dioxanivorans CB1190 10367692 YP_004335815.1 CDS Psed_5838 NC_015312.1 6188708 6190072 D TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: sma:SAV_7213 FMNH2-utilizing oxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase 6188708..6190072 Pseudonocardia dioxanivorans CB1190 10367693 YP_004335816.1 CDS Psed_5839 NC_015312.1 6190100 6190669 D PFAM: NADPH-dependent FMN reductase; KEGG: fri:FraEuI1c_0040 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 6190100..6190669 Pseudonocardia dioxanivorans CB1190 10367694 YP_004335817.1 CDS Psed_5840 NC_015312.1 6190829 6191794 D PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: gob:Gobs_2217 alcohol dehydrogenase zinc-binding domain-containing protein; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase 6190829..6191794 Pseudonocardia dioxanivorans CB1190 10367695 YP_004335818.1 CDS Psed_5841 NC_015312.1 6191948 6193441 D TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: kfl:Kfla_5077 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 6191948..6193441 Pseudonocardia dioxanivorans CB1190 10367696 YP_004335819.1 CDS Psed_5842 NC_015312.1 6193533 6194843 D PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit 6193533..6194843 Pseudonocardia dioxanivorans CB1190 10367697 YP_004335820.1 CDS Psed_5843 NC_015312.1 6195057 6195794 R KEGG: saq:Sare_2786 hypothetical protein; hypothetical protein complement(6195057..6195794) Pseudonocardia dioxanivorans CB1190 10367698 YP_004335821.1 CDS Psed_5844 NC_015312.1 6195806 6196012 R KEGG: fal:FRAAL4345 hypothetical protein; hypothetical protein complement(6195806..6196012) Pseudonocardia dioxanivorans CB1190 10367699 YP_004335822.1 CDS Psed_5845 NC_015312.1 6196119 6196673 D KEGG: mau:Micau_3015 sigma-70 family RNA polymerase; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 6196119..6196673 Pseudonocardia dioxanivorans CB1190 10367700 YP_004335823.1 CDS Psed_5846 NC_015312.1 6196718 6198169 R KEGG: scl:sce1195 hypothetical protein; hypothetical protein complement(6196718..6198169) Pseudonocardia dioxanivorans CB1190 10367701 YP_004335824.1 CDS Psed_5847 NC_015312.1 6198232 6199179 R KEGG: cfl:Cfla_2394 cell division FtsK/SpoIIIE; hypothetical protein complement(6198232..6199179) Pseudonocardia dioxanivorans CB1190 10367702 YP_004335825.1 CDS Psed_5848 NC_015312.1 6199316 6199696 R KEGG: nca:Noca_3309 peroxiredoxins-like; peroxiredoxins-like protein complement(6199316..6199696) Pseudonocardia dioxanivorans CB1190 10367703 YP_004335826.1 CDS Psed_5849 NC_015312.1 6199693 6201678 R KEGG: nfa:nfa25940 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: FAD dependent oxidoreductase; hypothetical protein complement(6199693..6201678) Pseudonocardia dioxanivorans CB1190 10367704 YP_004335827.1 CDS Psed_5850 NC_015312.1 6201764 6205180 R KEGG: mau:Micau_3867 transcriptional activator domain-containing protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator complement(6201764..6205180) Pseudonocardia dioxanivorans CB1190 10367705 YP_004335828.1 CDS Psed_5851 NC_015312.1 6205230 6206240 R KEGG: gob:Gobs_2919 integral membrane protein TerC; TIGRFAM: Integral membrane protein TerC, riboswitch-linked; PFAM: Integral membrane protein TerC; TerC family integral membrane protein complement(6205230..6206240) Pseudonocardia dioxanivorans CB1190 10367706 YP_004335829.1 CDS Psed_5852 NC_015312.1 6206491 6206925 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aau:AAur_1135 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 6206491..6206925 Pseudonocardia dioxanivorans CB1190 10367707 YP_004335830.1 CDS Psed_5853 NC_015312.1 6207021 6208253 R PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_6110 transposase; transposase IS111A/IS1328/IS1533 complement(6207021..6208253) Pseudonocardia dioxanivorans CB1190 10367708 YP_004335831.1 CDS Psed_5854 NC_015312.1 6208499 6209659 D PFAM: Phospholipase/carboxylesterase; KEGG: nca:Noca_2054 phospholipase/carboxylesterase; phospholipase/carboxylesterase 6208499..6209659 Pseudonocardia dioxanivorans CB1190 10367709 YP_004335832.1 CDS Psed_5855 NC_015312.1 6209690 6211093 R manually curated; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; KEGG: sgr:SGR_2706 transcriptional regulator; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(6209690..6211093) Pseudonocardia dioxanivorans CB1190 10367710 YP_004335833.1 CDS Psed_5856 NC_015312.1 6211108 6211644 D KEGG: sma:SAV_3428 hypothetical protein; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 6211108..6211644 Pseudonocardia dioxanivorans CB1190 10367711 YP_004335834.1 CDS Psed_5857 NC_015312.1 6211665 6212441 R PFAM: Methyltransferase type 11; KEGG: pla:Plav_2291 hypothetical protein; type 11 methyltransferase complement(6211665..6212441) Pseudonocardia dioxanivorans CB1190 10367712 YP_004335835.1 CDS Psed_5858 NC_015312.1 6212757 6214235 D PFAM: Amidase; KEGG: svi:Svir_03450 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; amidase 6212757..6214235 Pseudonocardia dioxanivorans CB1190 10367713 YP_004335836.1 CDS Psed_5859 NC_015312.1 6214339 6215505 D PFAM: Glycosyl transferase, group 1; KEGG: mva:Mvan_5248 glycosyl transferase, group 1; group 1 glycosyl transferase 6214339..6215505 Pseudonocardia dioxanivorans CB1190 10367714 YP_004335837.1 CDS Psed_5860 NC_015312.1 6215659 6215913 D hypothetical protein 6215659..6215913 Pseudonocardia dioxanivorans CB1190 10367715 YP_004335838.1 CDS Psed_5861 NC_015312.1 6216041 6218035 D KEGG: cai:Caci_5167 K potassium transporter; HAMAP: Potassium uptake protein, low affinity, Kup; PFAM: K+ potassium transporter; Low affinity potassium transport system protein kup 6216041..6218035 Pseudonocardia dioxanivorans CB1190 10367716 YP_004335839.1 CDS Psed_5862 NC_015312.1 6218100 6218840 R KEGG: nml:Namu_1186 hypothetical protein; hypothetical protein complement(6218100..6218840) Pseudonocardia dioxanivorans CB1190 10367717 YP_004335840.1 CDS Psed_5863 NC_015312.1 6218944 6219540 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_C0598 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(6218944..6219540) Pseudonocardia dioxanivorans CB1190 10367718 YP_004335841.1 CDS Psed_5864 NC_015312.1 6219734 6220672 D KEGG: mau:Micau_3319 hypothetical protein; hypothetical protein 6219734..6220672 Pseudonocardia dioxanivorans CB1190 10367719 YP_004335842.1 CDS Psed_5865 NC_015312.1 6220879 6222618 D PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_2033 MFS transporter, multidrug efflux transporter; major facilitator superfamily protein 6220879..6222618 Pseudonocardia dioxanivorans CB1190 10367720 YP_004335843.1 CDS Psed_5866 NC_015312.1 6222753 6223847 D PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: reu:Reut_C6321 zinc-containing alcohol dehydrogenase superfamily protein; SMART: Polyketide synthase, enoylreductase; L-iditol 2-dehydrogenase 6222753..6223847 Pseudonocardia dioxanivorans CB1190 10367721 YP_004335844.1 CDS Psed_5867 NC_015312.1 6223816 6224709 R hypothetical protein complement(6223816..6224709) Pseudonocardia dioxanivorans CB1190 10367722 YP_004335845.1 CDS Psed_5868 NC_015312.1 6224706 6224882 R hypothetical protein complement(6224706..6224882) Pseudonocardia dioxanivorans CB1190 10367723 YP_004335846.1 CDS Psed_5869 NC_015312.1 6224915 6226612 R KEGG: amd:AMED_7729 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I complement(6224915..6226612) Pseudonocardia dioxanivorans CB1190 10367724 YP_004335847.1 CDS Psed_5870 NC_015312.1 6226769 6227050 R hypothetical protein complement(6226769..6227050) Pseudonocardia dioxanivorans CB1190 10367725 YP_004335848.1 CDS Psed_5871 NC_015312.1 6227491 6227844 D hypothetical protein 6227491..6227844 Pseudonocardia dioxanivorans CB1190 10367726 YP_004335849.1 CDS Psed_5872 NC_015312.1 6227860 6228348 D KEGG: sen:SACE_5023 hypothetical protein; hypothetical protein 6227860..6228348 Pseudonocardia dioxanivorans CB1190 10367727 YP_004335850.1 CDS Psed_5873 NC_015312.1 6228304 6229533 R KEGG: sen:SACE_5022 regulator; transcriptional regulator CdaR complement(6228304..6229533) Pseudonocardia dioxanivorans CB1190 10367728 YP_004335851.1 CDS Psed_5874 NC_015312.1 6229666 6230889 R PFAM: YkuD domain; KEGG: rha:RHA1_ro02802 lipoprotein; ErfK/YbiS/YcfS/YnhG family protein complement(6229666..6230889) Pseudonocardia dioxanivorans CB1190 10367729 YP_004335852.1 CDS Psed_5875 NC_015312.1 6231093 6232142 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: brh:RBRH_02667 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 6231093..6232142 Pseudonocardia dioxanivorans CB1190 10367730 YP_004335853.1 CDS Psed_5876 NC_015312.1 6232147 6232614 R PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: sco:SCO5759 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(6232147..6232614) Pseudonocardia dioxanivorans CB1190 10367731 YP_004335854.1 CDS Psed_5877 NC_015312.1 6232611 6232946 R SMART: HTH transcriptional regulator, ArsR; KEGG: fal:FRAAL3030 ArsR family transcriptional regulator; regulatory protein ArsR complement(6232611..6232946) Pseudonocardia dioxanivorans CB1190 10367732 YP_004335855.1 CDS Psed_5878 NC_015312.1 6232965 6233579 D PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sna:Snas_3694 bifunctional deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein 6232965..6233579 Pseudonocardia dioxanivorans CB1190 10367733 YP_004335856.1 CDS Psed_5879 NC_015312.1 6233647 6234063 D KEGG: gob:Gobs_3845 membrane protein; hypothetical protein 6233647..6234063 Pseudonocardia dioxanivorans CB1190 10367734 YP_004335857.1 CDS Psed_5880 NC_015312.1 6234073 6234303 R KEGG: amd:AMED_3417 hypothetical protein; hypothetical protein complement(6234073..6234303) Pseudonocardia dioxanivorans CB1190 10367735 YP_004335858.1 CDS Psed_5881 NC_015312.1 6234416 6235090 D KEGG: amd:AMED_8476 heme oxygenase; PFAM: Haem oxygenase-like; heme oxygenase 6234416..6235090 Pseudonocardia dioxanivorans CB1190 10367736 YP_004335859.1 CDS Psed_5882 NC_015312.1 6235104 6236006 R PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: fal:FRAAL2958 gamma hydroxybutyrate dehydrogenase; 6-phosphogluconate dehydrogenase complement(6235104..6236006) Pseudonocardia dioxanivorans CB1190 10367737 YP_004335860.1 CDS Psed_5883 NC_015312.1 6236008 6236478 R hypothetical protein complement(6236008..6236478) Pseudonocardia dioxanivorans CB1190 10367738 YP_004335861.1 CDS Psed_5884 NC_015312.1 6236574 6237437 D KEGG: gob:Gobs_1538 hypothetical protein; hypothetical protein 6236574..6237437 Pseudonocardia dioxanivorans CB1190 10367739 YP_004335862.1 CDS Psed_5885 NC_015312.1 6237421 6238017 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_4335 TetR family transcriptional regulator; TetR family transcriptional regulator complement(6237421..6238017) Pseudonocardia dioxanivorans CB1190 10367740 YP_004335863.1 CDS Psed_5886 NC_015312.1 6238044 6238451 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcv:Bcav_3063 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(6238044..6238451) Pseudonocardia dioxanivorans CB1190 10367741 YP_004335864.1 CDS Psed_5887 NC_015312.1 6238515 6239516 D KEGG: rop:ROP_67110 DeoR family transcriptional regulator; DeoR family transcriptional regulator 6238515..6239516 Pseudonocardia dioxanivorans CB1190 10367742 YP_004335865.1 CDS Psed_5888 NC_015312.1 6239523 6240755 R PFAM: Amidohydrolase 1; KEGG: amd:AMED_2548 metal-dependent hydrolase; amidohydrolase complement(6239523..6240755) Pseudonocardia dioxanivorans CB1190 10367743 YP_004335866.1 CDS Psed_5889 NC_015312.1 6240894 6243593 D KEGG: nml:Namu_4086 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6240894..6243593 Pseudonocardia dioxanivorans CB1190 10367744 YP_004335867.1 CDS Psed_5890 NC_015312.1 6243713 6243904 D hypothetical protein 6243713..6243904 Pseudonocardia dioxanivorans CB1190 10367745 YP_004335868.1 CDS Psed_5891 NC_015312.1 6243897 6244616 D KEGG: bcv:Bcav_0752 hypothetical protein; hypothetical protein 6243897..6244616 Pseudonocardia dioxanivorans CB1190 10367746 YP_004335869.1 CDS Psed_5892 NC_015312.1 6244613 6247855 D KEGG: nml:Namu_2612 cytochrome P450; PFAM: Cytochrome P450; Flavodoxin/nitric oxide synthase; FAD-binding, type 1; Oxidoreductase FAD/NAD(P)-binding; NADPH--hemoprotein reductase 6244613..6247855 Pseudonocardia dioxanivorans CB1190 10367747 YP_004335870.1 CDS Psed_5893 NC_015312.1 6247956 6248378 R KEGG: mil:ML5_2753 hypothetical protein; hypothetical protein complement(6247956..6248378) Pseudonocardia dioxanivorans CB1190 10367748 YP_004335871.1 CDS Psed_5894 NC_015312.1 6248451 6249608 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pla:Plav_1773 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(6248451..6249608) Pseudonocardia dioxanivorans CB1190 10367749 YP_004335872.1 CDS Psed_5895 NC_015312.1 6249807 6251018 D PFAM: Domain of unknown function DUF1228; KEGG: rha:RHA1_ro00806 hypothetical protein; hypothetical protein 6249807..6251018 Pseudonocardia dioxanivorans CB1190 10367750 YP_004335873.1 CDS Psed_5896 NC_015312.1 6251042 6251743 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cai:Caci_8225 transcriptional regulator, TetR family; TetR family transcriptional regulator 6251042..6251743 Pseudonocardia dioxanivorans CB1190 10367751 YP_004335874.1 CDS Psed_5897 NC_015312.1 6251740 6253224 D KEGG: cai:Caci_5554 hypothetical protein; hypothetical protein 6251740..6253224 Pseudonocardia dioxanivorans CB1190 10367752 YP_004335875.1 CDS Psed_5898 NC_015312.1 6253242 6254135 R PFAM: Luciferase-like, subgroup; KEGG: kfl:Kfla_6396 luciferase-like monooxygenase; luciferase-like protein complement(6253242..6254135) Pseudonocardia dioxanivorans CB1190 10367753 YP_004335876.1 CDS Psed_5899 NC_015312.1 6254219 6255619 R KEGG: chu:CHU_0455 pectate lyase-related protein; hypothetical protein complement(6254219..6255619) Pseudonocardia dioxanivorans CB1190 10367754 YP_004335877.1 CDS Psed_5900 NC_015312.1 6255809 6256333 D hypothetical protein 6255809..6256333 Pseudonocardia dioxanivorans CB1190 10367755 YP_004335878.1 CDS Psed_5901 NC_015312.1 6256335 6256790 R KEGG: mav:MAV_3660 multimeric flavodoxin WrbA; multimeric flavodoxin WrbA complement(6256335..6256790) Pseudonocardia dioxanivorans CB1190 10367756 YP_004335879.1 CDS Psed_5902 NC_015312.1 6256867 6258132 D PFAM: Cation/H+ exchanger; KEGG: mjl:Mjls_4930 sodium/hydrogen exchanger; sodium/hydrogen exchanger 6256867..6258132 Pseudonocardia dioxanivorans CB1190 10367757 YP_004335880.1 CDS Psed_5903 NC_015312.1 6258273 6258998 D KEGG: bac:BamMC406_4417 hypothetical protein; hypothetical protein 6258273..6258998 Pseudonocardia dioxanivorans CB1190 10367758 YP_004335881.1 CDS Psed_5904 NC_015312.1 6258995 6260212 D PFAM: Cytochrome P450; KEGG: tbi:Tbis_2746 cytochrome P450; cytochrome P450 6258995..6260212 Pseudonocardia dioxanivorans CB1190 10367759 YP_004335882.1 CDS Psed_5905 NC_015312.1 6260325 6261599 D KEGG: rop:ROP_pROB01-03170 aminotransferase; PFAM: Aminotransferase class-III; acetylornithine transaminase 6260325..6261599 Pseudonocardia dioxanivorans CB1190 10367760 YP_004335883.1 CDS Psed_5906 NC_015312.1 6261643 6261900 D hypothetical protein 6261643..6261900 Pseudonocardia dioxanivorans CB1190 10367761 YP_004335884.1 CDS Psed_5908 NC_015312.1 6262307 6262801 R PFAM: Cupin 2, conserved barrel; KEGG: cai:Caci_3556 cupin 2 conserved barrel domain protein; cupin complement(6262307..6262801) Pseudonocardia dioxanivorans CB1190 10367763 YP_004335885.1 CDS Psed_5909 NC_015312.1 6263506 6264225 D KEGG: rxy:Rxyl_1852 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 6263506..6264225 Pseudonocardia dioxanivorans CB1190 10367764 YP_004335886.1 CDS Psed_5910 NC_015312.1 6264222 6265607 D KEGG: rxy:Rxyl_1851 phenylacetate-CoA ligase; phenylacetate--CoA ligase 6264222..6265607 Pseudonocardia dioxanivorans CB1190 10367765 YP_004335887.1 CDS Psed_5911 NC_015312.1 6265749 6267632 D PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: rxy:Rxyl_1850 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 6265749..6267632 Pseudonocardia dioxanivorans CB1190 10367766 YP_004335888.1 CDS Psed_5912 NC_015312.1 6267632 6268009 D PFAM: Acetone carboxylase, gamma subunit-related; KEGG: rxy:Rxyl_1849 subunit of acetophenone carboxylase; acetone carboxylase subunit gamma 6267632..6268009 Pseudonocardia dioxanivorans CB1190 10367767 YP_004335889.1 CDS Psed_5913 NC_015312.1 6268006 6270225 D KEGG: eba:c1A102 subunit of acetophenone carboxylase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase 6268006..6270225 Pseudonocardia dioxanivorans CB1190 10367768 YP_004335890.1 CDS Psed_5914 NC_015312.1 6270222 6272276 D PFAM: Hydantoinase B/oxoprolinase; KEGG: rxy:Rxyl_1847 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 6270222..6272276 Pseudonocardia dioxanivorans CB1190 10367769 YP_004335891.1 CDS Psed_5915 NC_015312.1 6272290 6272901 D hypothetical protein 6272290..6272901 Pseudonocardia dioxanivorans CB1190 10367770 YP_004335892.1 CDS Psed_5916 NC_015312.1 6272996 6274183 D KEGG: rxy:Rxyl_1737 thiolase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA C-acetyltransferase 6272996..6274183 Pseudonocardia dioxanivorans CB1190 10367771 YP_004335893.1 CDS Psed_5917 NC_015312.1 6274185 6276086 D KEGG: hoh:Hoch_2125 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 6274185..6276086 Pseudonocardia dioxanivorans CB1190 10367772 YP_004335894.1 CDS Psed_5919 NC_015312.1 6276551 6277348 D PFAM: Polysaccharide deacetylase; KEGG: fra:Francci3_0165 polysaccharide deacetylase; polysaccharide deacetylase 6276551..6277348 Pseudonocardia dioxanivorans CB1190 10367774 YP_004335895.1 CDS Psed_5920 NC_015312.1 6277452 6278060 D PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: nml:Namu_0604 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein 6277452..6278060 Pseudonocardia dioxanivorans CB1190 10367775 YP_004335896.1 CDS Psed_5921 NC_015312.1 6278050 6278781 D PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; KEGG: nml:Namu_0605 oxidoreductase FAD-binding domain-containing protein; oxidoreductase FAD-binding domain-containing protein 6278050..6278781 Pseudonocardia dioxanivorans CB1190 10367776 YP_004335897.1 CDS Psed_5922 NC_015312.1 6278803 6280305 R KEGG: tpr:Tpau_4141 carboxylesterase; PFAM: Carboxylesterase, type B; carboxylesterase complement(6278803..6280305) Pseudonocardia dioxanivorans CB1190 10367777 YP_004335898.1 CDS Psed_5923 NC_015312.1 6280414 6280986 R KEGG: rer:RER_32400 TetR family transcriptional regulator; TetR family transcriptional regulator complement(6280414..6280986) Pseudonocardia dioxanivorans CB1190 10367778 YP_004335899.1 CDS Psed_5924 NC_015312.1 6281089 6282912 D PFAM: Glycoside hydrolase 15-related; KEGG: amd:AMED_3900 glucoamylase-like glycosyl hydrolase; glycoside hydrolase 15-like protein 6281089..6282912 Pseudonocardia dioxanivorans CB1190 10367779 YP_004335900.1 CDS Psed_5925 NC_015312.1 6282949 6283950 D KEGG: sma:SAV_7048 cation efflux system protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 6282949..6283950 Pseudonocardia dioxanivorans CB1190 10367780 YP_004335901.1 CDS Psed_5926 NC_015312.1 6283998 6285374 D PFAM: AMP-dependent synthetase/ligase; KEGG: fre:Franean1_6630 hypothetical protein; AMP-dependent synthetase/ligase 6283998..6285374 Pseudonocardia dioxanivorans CB1190 10367781 YP_004335902.1 CDS Psed_5927 NC_015312.1 6285393 6286379 D KEGG: fri:FraEuI1c_4435 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SMART: CHK kinase-like; aminoglycoside phosphotransferase 6285393..6286379 Pseudonocardia dioxanivorans CB1190 10367782 YP_004335903.1 CDS Psed_5928 NC_015312.1 6286467 6286961 D PFAM: Protein of unknown function DUF664; KEGG: sco:SCO5093 mini-circle protein; hypothetical protein 6286467..6286961 Pseudonocardia dioxanivorans CB1190 10367783 YP_004335904.1 CDS Psed_5929 NC_015312.1 6287016 6288119 R PFAM: Beta-lactamase-related; KEGG: nml:Namu_3462 beta-lactamase; beta-lactamase complement(6287016..6288119) Pseudonocardia dioxanivorans CB1190 10367784 YP_004335905.1 CDS Psed_5930 NC_015312.1 6288195 6289466 R KEGG: met:M446_5697 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin; Carbon monoxide dehydrogenase subunit G; carbon-monoxide dehydrogenase complement(6288195..6289466) Pseudonocardia dioxanivorans CB1190 10367785 YP_004335906.1 CDS Psed_5931 NC_015312.1 6289463 6290335 R KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; carbon-monoxide dehydrogenase complement(6289463..6290335) Pseudonocardia dioxanivorans CB1190 10367786 YP_004335907.1 CDS Psed_5932 NC_015312.1 6290335 6291114 R PFAM: Crotonase, core; KEGG: reu:Reut_C5886 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase complement(6290335..6291114) Pseudonocardia dioxanivorans CB1190 10367787 YP_004335908.1 CDS Psed_5933 NC_015312.1 6291116 6293542 R KEGG: gka:GKP21 molybdopterin binding oxidoreductase large subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(6291116..6293542) Pseudonocardia dioxanivorans CB1190 10367788 YP_004335909.1 CDS Psed_5934 NC_015312.1 6293535 6295049 R KEGG: gmc:GY4MC1_2421 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(6293535..6295049) Pseudonocardia dioxanivorans CB1190 10367789 YP_004335910.1 CDS Psed_5935 NC_015312.1 6295223 6295843 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: fre:Franean1_3145 PadR-like family transcriptional regulator; PadR family transcriptional regulator 6295223..6295843 Pseudonocardia dioxanivorans CB1190 10367790 YP_004335911.1 CDS Psed_5936 NC_015312.1 6295870 6296538 R PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sco:SCO0154 hypothetical protein; alkyl hydroperoxide reductase complement(6295870..6296538) Pseudonocardia dioxanivorans CB1190 10367791 YP_004335912.1 CDS Psed_5937 NC_015312.1 6296627 6297247 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL1635 TetR family transcriptional regulator; TetR family transcriptional regulator 6296627..6297247 Pseudonocardia dioxanivorans CB1190 10367792 YP_004335913.1 CDS Psed_5938 NC_015312.1 6297359 6297646 D KEGG: tcu:Tcur_0280 glycoside hydrolase 13 domain-containing protein; glycoside hydrolase protein 6297359..6297646 Pseudonocardia dioxanivorans CB1190 10367793 YP_004335914.1 CDS Psed_5939 NC_015312.1 6297707 6297931 R KEGG: rha:RHA1_ro08581 hypothetical protein; hypothetical protein complement(6297707..6297931) Pseudonocardia dioxanivorans CB1190 10367794 YP_004335915.1 CDS Psed_5940 NC_015312.1 6298045 6299100 D KEGG: mau:Micau_3949 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 6298045..6299100 Pseudonocardia dioxanivorans CB1190 10367795 YP_004335916.1 CDS Psed_5941 NC_015312.1 6299175 6299822 D KEGG: sen:SACE_3341 glycosyl transferase protein; manually curated; PFAM: Glycosyl transferase, family 2; family 2 glycosyl transferase 6299175..6299822 Pseudonocardia dioxanivorans CB1190 10367796 YP_004335917.1 CDS Psed_5942 NC_015312.1 6299819 6300490 D PFAM: Protein of unknown function DUF2064; KEGG: saq:Sare_2754 hypothetical protein; hypothetical protein 6299819..6300490 Pseudonocardia dioxanivorans CB1190 10367797 YP_004335918.1 CDS Psed_5943 NC_015312.1 6300487 6301098 D PFAM: Methyltransferase type 12; KEGG: sen:SACE_3339 SAM-dependent methyltransferase; type 12 methyltransferase 6300487..6301098 Pseudonocardia dioxanivorans CB1190 10367798 YP_004335919.1 CDS Psed_5944 NC_015312.1 6301126 6301458 R hypothetical protein complement(6301126..6301458) Pseudonocardia dioxanivorans CB1190 10367799 YP_004335920.1 CDS Psed_5945 NC_015312.1 6301530 6302576 R KEGG: sen:SACE_3344 two-component system sensor kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase complement(6301530..6302576) Pseudonocardia dioxanivorans CB1190 10367800 YP_004335921.1 CDS Psed_5946 NC_015312.1 6302578 6303360 R KEGG: sen:SACE_3343 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator complement(6302578..6303360) Pseudonocardia dioxanivorans CB1190 10367801 YP_004335922.1 CDS Psed_5947 NC_015312.1 6303407 6304597 D KEGG: mjl:Mjls_0708 oxidoreductase, molybdopterin binding; manually curated; PFAM: Oxidoreductase, molybdopterin-binding domain; oxidoreductase molybdopterin binding protein 6303407..6304597 Pseudonocardia dioxanivorans CB1190 10367802 YP_004335923.1 CDS Psed_5948 NC_015312.1 6304594 6305058 D KEGG: mjl:Mjls_0707 hypothetical protein; hypothetical protein 6304594..6305058 Pseudonocardia dioxanivorans CB1190 10367803 YP_004335924.1 CDS Psed_5949 NC_015312.1 6305030 6306319 R KEGG: amd:AMED_8323 hypothetical protein; hypothetical protein complement(6305030..6306319) Pseudonocardia dioxanivorans CB1190 10367804 YP_004335925.1 CDS Psed_5950 NC_015312.1 6306468 6307892 R KEGG: sti:Sthe_2520 amidase; PFAM: Amidase; amidase complement(6306468..6307892) Pseudonocardia dioxanivorans CB1190 10367805 YP_004335926.1 CDS Psed_5951 NC_015312.1 6307889 6308131 R hypothetical protein complement(6307889..6308131) Pseudonocardia dioxanivorans CB1190 10367806 YP_004335927.1 CDS Psed_5952 NC_015312.1 6308128 6308556 R KEGG: aau:AAur_pTC20145 nitrile hydratase b-subunit; nitrile hydratase b-subunit complement(6308128..6308556) Pseudonocardia dioxanivorans CB1190 10367807 YP_004335928.1 CDS Psed_5953 NC_015312.1 6308561 6309190 R TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha complement(6308561..6309190) Pseudonocardia dioxanivorans CB1190 10367808 YP_004335929.1 CDS Psed_5954 NC_015312.1 6309232 6309912 R KEGG: aau:AAur_pTC20147 cobalt-containing nitrile hydratase beta subunit; nitrile hydratase complement(6309232..6309912) Pseudonocardia dioxanivorans CB1190 10367809 YP_004335930.1 CDS Psed_5955 NC_015312.1 6310051 6311487 R PFAM: Extracellular ligand-binding receptor; KEGG: aau:AAur_pTC20138 branched-chain amino acid ABC transporter; ABC transporter substrate-binding protein complement(6310051..6311487) Pseudonocardia dioxanivorans CB1190 10367810 YP_004335931.1 CDS Psed_5956 NC_015312.1 6311529 6311918 R KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator complement(6311529..6311918) Pseudonocardia dioxanivorans CB1190 10367811 YP_004335932.1 CDS Psed_5957 NC_015312.1 6311980 6312852 R KEGG: mmi:MMAR_3279 hypothetical protein; hypothetical protein complement(6311980..6312852) Pseudonocardia dioxanivorans CB1190 10367812 YP_004335933.1 CDS Psed_5958 NC_015312.1 6312849 6313964 R KEGG: msm:MSMEG_6684 agarase; agarase complement(6312849..6313964) Pseudonocardia dioxanivorans CB1190 10367813 YP_004335934.1 CDS Psed_5959 NC_015312.1 6314074 6315234 R KEGG: rer:RER_06600 hypothetical protein; hypothetical protein complement(6314074..6315234) Pseudonocardia dioxanivorans CB1190 10367814 YP_004335935.1 CDS Psed_5961 NC_015312.1 6316351 6317454 R PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit complement(6316351..6317454) Pseudonocardia dioxanivorans CB1190 10367816 YP_004335936.1 CDS Psed_5962 NC_015312.1 6317529 6318344 R hypothetical protein complement(6317529..6318344) Pseudonocardia dioxanivorans CB1190 10367817 YP_004335937.1 CDS Psed_5963 NC_015312.1 6318341 6318679 R PFAM: 4Fe-4S binding domain; KEGG: mjl:Mjls_5668 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(6318341..6318679) Pseudonocardia dioxanivorans CB1190 10367818 YP_004335938.1 CDS Psed_5964 NC_015312.1 6318705 6319496 R PFAM: ABC transporter-like; KEGG: msm:MSMEG_1234 taurine import ATP-binding protein TauB; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase complement(6318705..6319496) Pseudonocardia dioxanivorans CB1190 10367819 YP_004335939.1 CDS Psed_5965 NC_015312.1 6319493 6320470 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro06849 ABC transporter, permease; ABC transporter permease complement(6319493..6320470) Pseudonocardia dioxanivorans CB1190 10367820 YP_004335940.1 CDS Psed_5966 NC_015312.1 6320484 6321926 R KEGG: msm:MSMEG_1232 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(6320484..6321926) Pseudonocardia dioxanivorans CB1190 10367821 YP_004335941.1 CDS Psed_5967 NC_015312.1 6321923 6322150 R PFAM: 4Fe-4S binding domain; KEGG: mab:MAB_2240 ferredoxin; 4Fe-4S ferredoxin complement(6321923..6322150) Pseudonocardia dioxanivorans CB1190 10367822 YP_004335942.1 CDS Psed_5970 NC_015312.1 6325214 6326026 R KEGG: sco:SCO0610 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(6325214..6326026) Pseudonocardia dioxanivorans CB1190 10367824 YP_004335943.1 CDS Psed_5971 NC_015312.1 6326275 6327180 D KEGG: sme:SMa1501 hypothetical protein; hypothetical protein 6326275..6327180 Pseudonocardia dioxanivorans CB1190 10367825 YP_004335944.1 CDS Psed_5974 NC_015312.1 6328647 6329141 D PFAM: 4-oxalocrotonate tautomerase; KEGG: bbt:BBta_5144 hypothetical protein; 4-oxalocrotonate tautomerase 6328647..6329141 Pseudonocardia dioxanivorans CB1190 10367828 YP_004335945.1 CDS Psed_5975 NC_015312.1 6329304 6329882 R PFAM: Helix-turn-helix, HxlR type; KEGG: sen:SACE_3001 hypothetical protein; HxlR family transcriptional regulator complement(6329304..6329882) Pseudonocardia dioxanivorans CB1190 10367829 YP_004335946.1 CDS Psed_5977 NC_015312.1 6330277 6331167 R KEGG: amd:AMED_7697 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(6330277..6331167) Pseudonocardia dioxanivorans CB1190 10367831 YP_004335947.1 CDS Psed_5978 NC_015312.1 6331351 6332418 D KEGG: cai:Caci_7438 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; aryl-alcohol dehydrogenase 6331351..6332418 Pseudonocardia dioxanivorans CB1190 10367832 YP_004335948.1 CDS Psed_5979 NC_015312.1 6332468 6334168 D KEGG: fri:FraEuI1c_4109 hydrolase CocE/NonD family protein; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; hydrolase CocE/NonD family protein 6332468..6334168 Pseudonocardia dioxanivorans CB1190 10367833 YP_004335949.1 CDS Psed_5980 NC_015312.1 6334182 6335999 R PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; KEGG: rha:RHA1_ro06691 transcriptional regulator; Fis family transcriptional regulator complement(6334182..6335999) Pseudonocardia dioxanivorans CB1190 10367834 YP_004335950.1 CDS Psed_5981 NC_015312.1 6336201 6337841 R KEGG: rha:RHA1_ro08137 cyclohexanone monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclopentanone monooxygenase complement(6336201..6337841) Pseudonocardia dioxanivorans CB1190 10367835 YP_004335951.1 CDS Psed_5982 NC_015312.1 6337991 6338800 R KEGG: rha:RHA1_ro11053 N-acyl homoserine lactonase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein complement(6337991..6338800) Pseudonocardia dioxanivorans CB1190 10367836 YP_004335952.1 CDS Psed_5984 NC_015312.1 6339473 6341068 R PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro04805 major facilitator superfamily multidrug resistance protein; major facilitator superfamily protein complement(6339473..6341068) Pseudonocardia dioxanivorans CB1190 10367838 YP_004335953.1 CDS Psed_5985 NC_015312.1 6341065 6341961 R PFAM: Peptidase M48; KEGG: nda:Ndas_0289 peptidase M48 Ste24p; peptidase M48 Ste24p complement(6341065..6341961) Pseudonocardia dioxanivorans CB1190 10367839 YP_004335954.1 CDS Psed_5986 NC_015312.1 6341988 6342422 R KEGG: amd:AMED_3902 integral membrane protein; hypothetical protein complement(6341988..6342422) Pseudonocardia dioxanivorans CB1190 10367840 YP_004335955.1 CDS Psed_5987 NC_015312.1 6342505 6342978 R KEGG: sen:SACE_2415 integral membrane protein; hypothetical protein complement(6342505..6342978) Pseudonocardia dioxanivorans CB1190 10367841 YP_004335956.1 CDS Psed_5988 NC_015312.1 6343064 6343609 R KEGG: spu:579074 similar to HLA-B-associated transcript 3; hypothetical protein complement(6343064..6343609) Pseudonocardia dioxanivorans CB1190 10367842 YP_004335957.1 CDS Psed_5989 NC_015312.1 6343688 6343924 R hypothetical protein complement(6343688..6343924) Pseudonocardia dioxanivorans CB1190 10367843 YP_004335958.1 CDS Psed_5990 NC_015312.1 6344254 6345195 R KEGG: nfa:nfa28330 transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6344254..6345195) Pseudonocardia dioxanivorans CB1190 10367844 YP_004335959.1 CDS Psed_5991 NC_015312.1 6345297 6346730 D PFAM: Amidase; KEGG: nfa:nfa28320 amidase; amidase 6345297..6346730 Pseudonocardia dioxanivorans CB1190 10367845 YP_004335960.1 CDS Psed_5992 NC_015312.1 6346940 6348019 D PFAM: Ribonuclease BN-related; KEGG: sco:SCO7414 integral membrane protein; ribonuclease BN 6346940..6348019 Pseudonocardia dioxanivorans CB1190 10367846 YP_004335961.1 CDS Psed_5994 NC_015312.1 6348355 6348951 D TIGRFAM: Conserved hypothetical protein CHP03086; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: scb:SCAB_5731 hypothetical protein; hypothetical protein 6348355..6348951 Pseudonocardia dioxanivorans CB1190 10367848 YP_004335962.1 CDS Psed_5995 NC_015312.1 6349034 6350602 R KEGG: nml:Namu_0665 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Monooxygenase, FAD-binding; gluconate 2-dehydrogenase complement(6349034..6350602) Pseudonocardia dioxanivorans CB1190 10367849 YP_004335963.1 CDS Psed_5996 NC_015312.1 6350599 6351033 R KEGG: nml:Namu_0666 hypothetical protein; hypothetical protein complement(6350599..6351033) Pseudonocardia dioxanivorans CB1190 10367850 YP_004335964.1 CDS Psed_5997 NC_015312.1 6351193 6352704 R PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: nda:Ndas_3497 sigma54 specific transcriptional regulator, Fis family; Fis family transcriptional regulator complement(6351193..6352704) Pseudonocardia dioxanivorans CB1190 10367851 YP_004335965.1 CDS Psed_5998 NC_015312.1 6352974 6357482 D PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: ami:Amir_1129 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 6352974..6357482 Pseudonocardia dioxanivorans CB1190 10367852 YP_004335966.1 CDS Psed_5999 NC_015312.1 6357469 6358434 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_3802 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(6357469..6358434) Pseudonocardia dioxanivorans CB1190 10367853 YP_004335967.1 CDS Psed_6000 NC_015312.1 6358510 6359382 D KEGG: sco:SCO0891 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 6358510..6359382 Pseudonocardia dioxanivorans CB1190 10367854 YP_004335968.1 CDS Psed_6001 NC_015312.1 6359525 6360034 D KEGG: fri:FraEuI1c_2782 F420-dependent oxidoreductase; hypothetical protein 6359525..6360034 Pseudonocardia dioxanivorans CB1190 10367855 YP_004335969.1 CDS Psed_6002 NC_015312.1 6360162 6361232 R KEGG: mva:Mvan_0652 regulatory protein; regulatory protein complement(6360162..6361232) Pseudonocardia dioxanivorans CB1190 10367856 YP_004335970.1 CDS Psed_6003 NC_015312.1 6361325 6361771 D KEGG: sma:SAV_1188 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 6361325..6361771 Pseudonocardia dioxanivorans CB1190 10367857 YP_004335971.1 CDS Psed_6004 NC_015312.1 6361936 6362643 D KEGG: mva:Mvan_0647 nitrile hydratase; nitrile hydratase 6361936..6362643 Pseudonocardia dioxanivorans CB1190 10367858 YP_004335972.1 CDS Psed_6005 NC_015312.1 6362673 6363296 D TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: mva:Mvan_0648 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit; nitrile hydratase subunit alpha 6362673..6363296 Pseudonocardia dioxanivorans CB1190 10367859 YP_004335973.1 CDS Psed_6006 NC_015312.1 6363293 6363658 D KEGG: mva:Mvan_0649 hypothetical protein; hypothetical protein 6363293..6363658 Pseudonocardia dioxanivorans CB1190 10367860 YP_004335974.1 CDS Psed_6007 NC_015312.1 6363730 6364746 R PFAM: Acetamidase/Formamidase; KEGG: fri:FraEuI1c_0390 acetamidase/formamidase; acetamidase/formamidase complement(6363730..6364746) Pseudonocardia dioxanivorans CB1190 10367861 YP_004335975.1 CDS Psed_6008 NC_015312.1 6364909 6365430 D KEGG: mva:Mvan_0650 hypothetical protein; hypothetical protein 6364909..6365430 Pseudonocardia dioxanivorans CB1190 10367862 YP_004335976.1 CDS Psed_6009 NC_015312.1 6366040 6366459 R PFAM: Cupin 2, conserved barrel; KEGG: sti:Sthe_2323 cupin 2 conserved barrel domain protein; cupin complement(6366040..6366459) Pseudonocardia dioxanivorans CB1190 10367863 YP_004335977.1 CDS Psed_6010 NC_015312.1 6366868 6367428 D KEGG: nda:Ndas_0789 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, ArsR; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 6366868..6367428 Pseudonocardia dioxanivorans CB1190 10367864 YP_004335978.1 CDS Psed_6011 NC_015312.1 6367403 6368644 R PFAM: Aminotransferase, class I/classII; KEGG: rsc:RCFBP_20493 transcriptional regulators containing a DNA-binding hth domain and an aminotransferase domain transcriptional regulator protein; GntR family transcriptional regulator complement(6367403..6368644) Pseudonocardia dioxanivorans CB1190 10367865 YP_004335979.1 CDS Psed_6012 NC_015312.1 6368833 6370008 D KEGG: rsa:RSal33209_0658 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; aspartate transaminase 6368833..6370008 Pseudonocardia dioxanivorans CB1190 10367866 YP_004335980.1 CDS Psed_6013 NC_015312.1 6370262 6371875 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: pjd:Pjdr2_5222 extracellular solute-binding protein family 5; ABC transporter substrate-binding protein 6370262..6371875 Pseudonocardia dioxanivorans CB1190 10367867 YP_004335981.1 CDS Psed_6014 NC_015312.1 6371883 6372815 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sti:Sthe_3428 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 6371883..6372815 Pseudonocardia dioxanivorans CB1190 10367868 YP_004335982.1 CDS Psed_6015 NC_015312.1 6372803 6373765 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr5515 ABC transporter, permease; ABC transporter permease 6372803..6373765 Pseudonocardia dioxanivorans CB1190 10367869 YP_004335983.1 CDS Psed_6016 NC_015312.1 6373773 6374528 D KEGG: avi:Avi_1654 Zn-dependent hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 6373773..6374528 Pseudonocardia dioxanivorans CB1190 10367870 YP_004335984.1 CDS Psed_6017 NC_015312.1 6374537 6375748 D PFAM: Amidohydrolase 1; KEGG: bpt:Bpet0100 imidazolonepropionase; amidohydrolase 6374537..6375748 Pseudonocardia dioxanivorans CB1190 10367871 YP_004335985.1 CDS Psed_6018 NC_015312.1 6375753 6376769 D SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: ret:RHE_CH03099 oligopeptide ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 6375753..6376769 Pseudonocardia dioxanivorans CB1190 10367872 YP_004335986.1 CDS Psed_6019 NC_015312.1 6376766 6377758 D SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dau:Daud_0389 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 6376766..6377758 Pseudonocardia dioxanivorans CB1190 10367873 YP_004335987.1 CDS Psed_6020 NC_015312.1 6377968 6378747 D KEGG: ami:Amir_1933 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6377968..6378747 Pseudonocardia dioxanivorans CB1190 10367874 YP_004335988.1 CDS Psed_6021 NC_015312.1 6378734 6380119 D KEGG: amd:AMED_5727 two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; histidine kinase 6378734..6380119 Pseudonocardia dioxanivorans CB1190 10367875 YP_004335989.1 CDS Psed_6022 NC_015312.1 6380116 6380340 D hypothetical protein 6380116..6380340 Pseudonocardia dioxanivorans CB1190 10367876 YP_004335990.1 CDS Psed_6023 NC_015312.1 6380312 6381256 R KEGG: svi:Svir_08000 hypothetical protein; hypothetical protein complement(6380312..6381256) Pseudonocardia dioxanivorans CB1190 10367877 YP_004335991.1 CDS Psed_6024 NC_015312.1 6381441 6382235 R KEGG: rxy:Rxyl_2722 hypothetical protein; hypothetical protein complement(6381441..6382235) Pseudonocardia dioxanivorans CB1190 10367878 YP_004335992.1 CDS Psed_6025 NC_015312.1 6382232 6382444 R hypothetical protein complement(6382232..6382444) Pseudonocardia dioxanivorans CB1190 10367879 YP_004335993.1 CDS Psed_6026 NC_015312.1 6382550 6383668 R KEGG: fra:Francci3_1987 mandelate racemase/muconate lactonizing enzyme; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; mandelate racemase complement(6382550..6383668) Pseudonocardia dioxanivorans CB1190 10367880 YP_004335994.1 CDS Psed_6027 NC_015312.1 6383868 6385682 D KEGG: sco:SCO7412 thiamine pyrophosphate protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; pyruvate dehydrogenase 6383868..6385682 Pseudonocardia dioxanivorans CB1190 10367881 YP_004335995.1 CDS Psed_6028 NC_015312.1 6385679 6388831 D KEGG: rxy:Rxyl_2720 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich domain; D-lactate dehydrogenase 6385679..6388831 Pseudonocardia dioxanivorans CB1190 10367882 YP_004335996.1 CDS Psed_6029 NC_015312.1 6388828 6389823 D KEGG: sco:SCO7413 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR 6388828..6389823 Pseudonocardia dioxanivorans CB1190 10367883 YP_004335997.1 CDS Psed_6030 NC_015312.1 6389856 6391604 R PFAM: Glycoside hydrolase 15-related; KEGG: rha:RHA1_ro08311 glycosyl hydrolase; glycoside hydrolase 15-like protein complement(6389856..6391604) Pseudonocardia dioxanivorans CB1190 10367884 YP_004335998.1 CDS Psed_6031 NC_015312.1 6391895 6392344 R KEGG: tcu:Tcur_1124 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein complement(6391895..6392344) Pseudonocardia dioxanivorans CB1190 10367885 YP_004335999.1 CDS Psed_6032 NC_015312.1 6392703 6393191 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mpa:MAP2446c hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein complement(6392703..6393191) Pseudonocardia dioxanivorans CB1190 10367886 YP_004336000.1 CDS Psed_6033 NC_015312.1 6393311 6393700 R PFAM: Protein of unknown function DUF1486; KEGG: pna:Pnap_4728 hypothetical protein; hypothetical protein complement(6393311..6393700) Pseudonocardia dioxanivorans CB1190 10367887 YP_004336001.1 CDS Psed_6034 NC_015312.1 6393909 6394691 R PFAM: Alpha/beta hydrolase fold-1; KEGG: nca:Noca_0210 alpha/beta hydrolase fold; alpha/beta hydrolase complement(6393909..6394691) Pseudonocardia dioxanivorans CB1190 10367888 YP_004336002.1 CDS Psed_6035 NC_015312.1 6394697 6395440 R PFAM: Dienelactone hydrolase; KEGG: rpd:RPD_3874 dienelactone hydrolase; dienelactone hydrolase complement(6394697..6395440) Pseudonocardia dioxanivorans CB1190 10367889 YP_004336003.1 CDS Psed_6036 NC_015312.1 6395446 6396399 R KEGG: fre:Franean1_4746 3-(2,3-dihydroxyphenyl)propionate dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; 3-carboxyethylcatechol 2,3-dioxygenase complement(6395446..6396399) Pseudonocardia dioxanivorans CB1190 10367890 YP_004336004.1 CDS Psed_6037 NC_015312.1 6396402 6397487 R PFAM: Luciferase-like, subgroup; KEGG: ara:Arad_7171 luciferase; luciferase-like protein complement(6396402..6397487) Pseudonocardia dioxanivorans CB1190 10367891 YP_004336005.1 CDS Psed_6038 NC_015312.1 6397612 6398604 R KEGG: mjl:Mjls_1672 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(6397612..6398604) Pseudonocardia dioxanivorans CB1190 10367892 YP_004336006.1 CDS Psed_6039 NC_015312.1 6398931 6400163 R PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_6110 transposase; transposase IS111A/IS1328/IS1533 complement(6398931..6400163) Pseudonocardia dioxanivorans CB1190 10367893 YP_004336007.1 CDS Psed_6041 NC_015312.1 6400643 6401434 R KEGG: tpr:Tpau_4273 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(6400643..6401434) Pseudonocardia dioxanivorans CB1190 10367895 YP_004336008.1 CDS Psed_6042 NC_015312.1 6401431 6403077 R PFAM: Integrase, catalytic core; KEGG: rer:pREL1_0265 transposase; integrase catalytic subunit complement(6401431..6403077) Pseudonocardia dioxanivorans CB1190 10367896 YP_004336009.1 CDS Psed_6044 NC_015312.1 6404134 6404451 R KEGG: msp:Mspyr1_54050 transcriptional regulator; transcriptional regulator complement(6404134..6404451) Pseudonocardia dioxanivorans CB1190 10367898 YP_004336010.1 CDS Psed_6045 NC_015312.1 6404448 6405536 R PFAM: Integrase, catalytic core, phage; KEGG: msp:Mspyr1_54040 site-specific recombinase XerD; integrase protein complement(6404448..6405536) Pseudonocardia dioxanivorans CB1190 10367899 YP_004336011.1 CDS Psed_6047 NC_015312.1 6405987 6407171 D PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase; integrase catalytic subunit 6405987..6407171 Pseudonocardia dioxanivorans CB1190 10367901 YP_004336012.1 CDS Psed_6049 NC_015312.1 6407913 6409157 D PFAM: Transposase, mutator type; KEGG: gob:Gobs_2905 transposase mutator type; transposase mutator type 6407913..6409157 Pseudonocardia dioxanivorans CB1190 10367903 YP_004336013.1 CDS Psed_6051 NC_015312.1 6409832 6411250 R PFAM: Amidase; KEGG: rme:Rmet_3556 amidase; amidase complement(6409832..6411250) Pseudonocardia dioxanivorans CB1190 10367905 YP_004336014.1 CDS Psed_6052 NC_015312.1 6411490 6412344 R TIGRFAM: 3-oxoadipate enol-lactonase; KEGG: rxy:Rxyl_1578 3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase fold-1; 3-oxoadipate enol-lactonase complement(6411490..6412344) Pseudonocardia dioxanivorans CB1190 10367906 YP_004336015.1 CDS Psed_6053 NC_015312.1 6412371 6412853 R KEGG: rha:RHA1_ro02523 hypothetical protein; hypothetical protein complement(6412371..6412853) Pseudonocardia dioxanivorans CB1190 10367907 YP_004336016.1 CDS Psed_6054 NC_015312.1 6412850 6413689 R TIGRFAM: Cytidyltransferase-related; KEGG: nml:Namu_2214 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; cytidyltransferase-related domain-containing protein complement(6412850..6413689) Pseudonocardia dioxanivorans CB1190 10367908 YP_004336017.1 CDS Psed_6055 NC_015312.1 6413686 6413868 R hypothetical protein complement(6413686..6413868) Pseudonocardia dioxanivorans CB1190 10367909 YP_004336018.1 CDS Psed_6056 NC_015312.1 6413865 6415163 R KEGG: rxy:Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase complement(6413865..6415163) Pseudonocardia dioxanivorans CB1190 10367910 YP_004336019.1 CDS Psed_6057 NC_015312.1 6415176 6416240 R manually curated; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: bts:Btus_2062 alcohol dehydrogenase GroES domain protein; SMART: Polyketide synthase, enoylreductase; molecular chaperone GroES complement(6415176..6416240) Pseudonocardia dioxanivorans CB1190 10367911 YP_004336020.1 CDS Psed_6058 NC_015312.1 6416255 6417277 R PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0215 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase complement(6416255..6417277) Pseudonocardia dioxanivorans CB1190 10367912 YP_004336021.1 CDS Psed_6059 NC_015312.1 6417280 6417582 R PFAM: Monooxygenase component MmoB/DmpM; KEGG: fra:Francci3_0214 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM complement(6417280..6417582) Pseudonocardia dioxanivorans CB1190 10367913 YP_004336022.1 CDS Psed_6060 NC_015312.1 6417579 6417977 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: fra:Francci3_0213 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) domain-containing protein complement(6417579..6417977) Pseudonocardia dioxanivorans CB1190 10367914 YP_004336023.1 CDS Psed_6061 NC_015312.1 6417988 6418233 R PFAM: Toluene-4-monooxygenase system B; KEGG: bbt:BBta_1597 toluene-4-monooxygenase system protein B; Toluene-4-monooxygenase system B complement(6417988..6418233) Pseudonocardia dioxanivorans CB1190 10367915 YP_004336024.1 CDS Psed_6062 NC_015312.1 6418269 6419786 R KEGG: bts:Btus_2069 methane/phenol/toluene hydroxylase; PFAM: Methane/phenol/toluene hydroxylase; YHS; phenol 2-monooxygenase complement(6418269..6419786) Pseudonocardia dioxanivorans CB1190 10367916 YP_004336025.1 CDS Psed_6063 NC_015312.1 6419937 6420224 R TIGRFAM: Muconolactone delta-isomerase; KEGG: rer:RER_54210 muconolactone isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase complement(6419937..6420224) Pseudonocardia dioxanivorans CB1190 10367917 YP_004336026.1 CDS Psed_6064 NC_015312.1 6420230 6421351 R SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: rha:RHA1_ro02372 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; muconate and chloromuconate cycloisomerase complement(6420230..6421351) Pseudonocardia dioxanivorans CB1190 10367918 YP_004336027.1 CDS Psed_6065 NC_015312.1 6421395 6422249 R TIGRFAM: Catechol 1,2-dioxygenase, actinobacteria; KEGG: rha:RHA1_ro02373 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; catechol 1,2-dioxygenase complement(6421395..6422249) Pseudonocardia dioxanivorans CB1190 10367919 YP_004336028.1 CDS Psed_6066 NC_015312.1 6422278 6423873 R PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: rer:RER_54270 phenol hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase complement(6422278..6423873) Pseudonocardia dioxanivorans CB1190 10367920 YP_004336029.1 CDS Psed_6067 NC_015312.1 6423915 6424487 R KEGG: rha:RHA1_ro08076 phenol 2-monoxygenase, reductase component; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing FMN-binding protein complement(6423915..6424487) Pseudonocardia dioxanivorans CB1190 10367921 YP_004336030.1 CDS Psed_6068 NC_015312.1 6424597 6425415 D TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: rer:RER_54240 transcriptional regulator CatR; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 6424597..6425415 Pseudonocardia dioxanivorans CB1190 10367922 YP_004336031.1 CDS Psed_6070 NC_015312.1 6425774 6426274 R KEGG: cai:Caci_3238 hypothetical protein; hypothetical protein complement(6425774..6426274) Pseudonocardia dioxanivorans CB1190 10367924 YP_004336032.1 CDS Psed_6071 NC_015312.1 6426641 6427681 D KEGG: xtr:100497072 WAS/WASL-interacting protein family member 2-like; hypothetical protein 6426641..6427681 Pseudonocardia dioxanivorans CB1190 10367925 YP_004336033.1 CDS Psed_6072 NC_015312.1 6427681 6428970 D KEGG: tfu:Tfu_0073 chromosome partitioning ATPase; chromosome partitioning ATPase 6427681..6428970 Pseudonocardia dioxanivorans CB1190 10367926 YP_004336034.1 CDS Psed_6073 NC_015312.1 6428972 6430096 D KEGG: mxa:MXAN_2883 lipoprotein; hypothetical protein 6428972..6430096 Pseudonocardia dioxanivorans CB1190 10367927 YP_004336035.1 CDS Psed_6074 NC_015312.1 6430098 6431351 D PFAM: Glycoside hydrolase, family 16; KEGG: mva:Mvan_0209 glycoside hydrolase protein; glycoside hydrolase protein 6430098..6431351 Pseudonocardia dioxanivorans CB1190 10367928 YP_004336036.1 CDS Psed_6075 NC_015312.1 6431387 6433270 D KEGG: lma:LmjF35.0540 proteophosphoglycan 5; hypothetical protein 6431387..6433270 Pseudonocardia dioxanivorans CB1190 10367929 YP_004336037.1 CDS Psed_6077 NC_015312.1 6433771 6434721 D PFAM: Integrase, catalytic core, phage; KEGG: mjl:Mjls_5285 phage integrase protein; integrase protein 6433771..6434721 Pseudonocardia dioxanivorans CB1190 10367931 YP_004336038.1 CDS Psed_6078 NC_015312.1 6434718 6437201 D PFAM: Integrase, catalytic core, phage; KEGG: mjl:Mjls_5286 DNA integrase/recombinase; integrase protein 6434718..6437201 Pseudonocardia dioxanivorans CB1190 10367932 YP_004336039.1 CDS Psed_6080 NC_015312.1 6438267 6439499 D PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: nml:Namu_4764 transposase IS111A/IS1328/IS1533; transposase IS111A/IS1328/IS1533 6438267..6439499 Pseudonocardia dioxanivorans CB1190 10367934 YP_004336040.1 CDS Psed_6082 NC_015312.1 6440584 6440823 D hypothetical protein 6440584..6440823 Pseudonocardia dioxanivorans CB1190 10367936 YP_004336041.1 CDS Psed_6083 NC_015312.1 6440858 6441496 D hypothetical protein 6440858..6441496 Pseudonocardia dioxanivorans CB1190 10367937 YP_004336042.1 CDS Psed_6084 NC_015312.1 6441506 6441703 R hypothetical protein complement(6441506..6441703) Pseudonocardia dioxanivorans CB1190 10367938 YP_004336043.1 CDS Psed_6085 NC_015312.1 6441796 6442218 R hypothetical protein complement(6441796..6442218) Pseudonocardia dioxanivorans CB1190 10367939 YP_004336044.1 CDS Psed_6086 NC_015312.1 6442262 6444061 R PFAM: Integrase, catalytic core, phage; KEGG: sna:Snas_6234 regulatory protein GntR HTH; integrase protein complement(6442262..6444061) Pseudonocardia dioxanivorans CB1190 10367940 YP_004336045.1 CDS Psed_6089 NC_015312.1 6445383 6446168 D PFAM: ABC-2 type transporter; KEGG: kfl:Kfla_5292 ABC-2 type transporter; ABC transporter 6445383..6446168 Pseudonocardia dioxanivorans CB1190 10367944 YP_004336046.1 CDS Psed_6090 NC_015312.1 6446235 6447671 D PFAM: Protein of unknown function DUF1212; KEGG: ami:Amir_0372 protein of unknown function DUF1212; hypothetical protein 6446235..6447671 Pseudonocardia dioxanivorans CB1190 10367945 YP_004336047.1 CDS Psed_6091 NC_015312.1 6447723 6449159 D KEGG: sen:SACE_0462 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; alpha,alpha-trehalose-phosphate synthase 6447723..6449159 Pseudonocardia dioxanivorans CB1190 10367946 YP_004336048.1 CDS Psed_6092 NC_015312.1 6449152 6449925 D KEGG: ami:Amir_0370 trehalose-phosphatase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; trehalose-phosphatase 6449152..6449925 Pseudonocardia dioxanivorans CB1190 10367947 YP_004336049.1 CDS Psed_6093 NC_015312.1 6449931 6451028 R KEGG: ami:Amir_0346 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator complement(6449931..6451028) Pseudonocardia dioxanivorans CB1190 10367948 YP_004336050.1 CDS Psed_6094 NC_015312.1 6451163 6452089 D PFAM: ABC transporter metal-binding lipoprotein; KEGG: cmi:CMM_2941 metal ABC transporter, substrate-binding protein; metal ion ABC transporter periplasmic subunit 6451163..6452089 Pseudonocardia dioxanivorans CB1190 10367949 YP_004336051.1 CDS Psed_6095 NC_015312.1 6452110 6452958 D PFAM: ABC transporter-like; KEGG: sen:SACE_0452 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 6452110..6452958 Pseudonocardia dioxanivorans CB1190 10367950 YP_004336052.1 CDS Psed_6096 NC_015312.1 6452955 6453833 D PFAM: ABC-3; KEGG: ami:Amir_0354 ABC-3 protein; ABC transporter permease 6452955..6453833 Pseudonocardia dioxanivorans CB1190 10367951 YP_004336053.1 CDS Psed_6097 NC_015312.1 6454003 6454992 R TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: nfa:nfa4390 tRNA/rRNA methyltransferase; SMART: RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase complement(6454003..6454992) Pseudonocardia dioxanivorans CB1190 10367952 YP_004336054.1 CDS Psed_6098 NC_015312.1 6455037 6456485 R SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: sen:SACE_0443 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase complement(6455037..6456485) Pseudonocardia dioxanivorans CB1190 10367953 YP_004336055.1 CDS Psed_6099 NC_015312.1 6456528 6456968 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nca:Noca_2629 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 6456528..6456968 Pseudonocardia dioxanivorans CB1190 10367954 YP_004336056.1 CDS Psed_6100 NC_015312.1 6457194 6457676 R TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: req:REQ_06320 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(6457194..6457676) Pseudonocardia dioxanivorans CB1190 10367955 YP_004336057.1 CDS Psed_6101 NC_015312.1 6457673 6458428 R TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rop:ROP_43780 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(6457673..6458428) Pseudonocardia dioxanivorans CB1190 10367956 YP_004336058.1 CDS Psed_6102 NC_015312.1 6458470 6458964 R PFAM: Transcription factor CarD; KEGG: ami:Amir_0364 transcriptional regulator, CarD family; carD family transcriptional regulator complement(6458470..6458964) Pseudonocardia dioxanivorans CB1190 10367957 YP_004336059.1 CDS Psed_6103 NC_015312.1 6459214 6459816 D PFAM: DR1885-like metal-binding protein; KEGG: sen:SACE_0437 hypothetical protein; hypothetical protein 6459214..6459816 Pseudonocardia dioxanivorans CB1190 10367958 YP_004336060.1 CDS Psed_6104 NC_015312.1 6459885 6461189 D KEGG: svi:Svir_35070 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 6459885..6461189 Pseudonocardia dioxanivorans CB1190 10367959 YP_004336061.1 CDS Psed_6105 NC_015312.1 6461293 6462138 R KEGG: gbr:Gbro_0965 hypothetical protein; hypothetical protein complement(6461293..6462138) Pseudonocardia dioxanivorans CB1190 10367960 YP_004336062.1 CDS Psed_6107 NC_015312.1 6462982 6463866 D KEGG: sen:SACE_0432 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; HhH-GPD family protein 6462982..6463866 Pseudonocardia dioxanivorans CB1190 10367962 YP_004336063.1 CDS Psed_6108 NC_015312.1 6463882 6464370 D KEGG: sen:SACE_0431 hypothetical protein; hypothetical protein 6463882..6464370 Pseudonocardia dioxanivorans CB1190 10367963 YP_004336064.1 CDS Psed_6109 NC_015312.1 6464625 6465452 R PFAM: Alpha/beta hydrolase fold-1; KEGG: svi:Svir_35370 predicted hydrolase or acyltransferase of alpha/beta superfamily; alpha/beta hydrolase complement(6464625..6465452) Pseudonocardia dioxanivorans CB1190 10367964 YP_004336065.1 CDS Psed_6110 NC_015312.1 6465488 6465808 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: fri:FraEuI1c_2656 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 6465488..6465808 Pseudonocardia dioxanivorans CB1190 10367965 YP_004336066.1 CDS Psed_6111 NC_015312.1 6465862 6466638 D PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; KEGG: amd:AMED_8708 SIR2 family NAD-dependent deacetylase; silent information regulator protein Sir2 6465862..6466638 Pseudonocardia dioxanivorans CB1190 10367966 YP_004336067.1 CDS Psed_6112 NC_015312.1 6466760 6467434 D KEGG: kfl:Kfla_6806 phytochrome sensor protein; phytochrome sensor protein 6466760..6467434 Pseudonocardia dioxanivorans CB1190 10367967 YP_004336068.1 CDS Psed_6113 NC_015312.1 6467516 6470059 R KEGG: sen:SACE_0414 ATP-dependent Clp protease; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; ATPase complement(6467516..6470059) Pseudonocardia dioxanivorans CB1190 10367968 YP_004336069.1 CDS Psed_6114 NC_015312.1 6470250 6471125 R PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: sro:Sros_5976 iron transport/utilisation related protein; FAD-binding 9 siderophore-interacting domain-containing protein complement(6470250..6471125) Pseudonocardia dioxanivorans CB1190 10367969 YP_004336070.1 CDS Psed_6115 NC_015312.1 6471335 6471676 R KEGG: ami:Amir_0330 hypothetical protein; hypothetical protein complement(6471335..6471676) Pseudonocardia dioxanivorans CB1190 10367970 YP_004336071.1 CDS Psed_6116 NC_015312.1 6471818 6473320 R PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase, class II; KEGG: gob:Gobs_0637 lysyl-tRNA synthetase; lysyl-tRNA synthetase complement(6471818..6473320) Pseudonocardia dioxanivorans CB1190 10367971 YP_004336072.1 CDS Psed_6117 NC_015312.1 6473476 6474354 R PFAM: Type III pantothenate kinase; TIGRFAM: Type III pantothenate kinase; HAMAP: Type III pantothenate kinase; KEGG: sen:SACE_0408 accessory factor Bvg; Baf family transcriptional acitvator complement(6473476..6474354) Pseudonocardia dioxanivorans CB1190 10367972 YP_004336073.1 CDS Psed_6118 NC_015312.1 6474360 6474785 R PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: amd:AMED_8737 aspartate 1-decarboxylase; aspartate 1-decarboxylase complement(6474360..6474785) Pseudonocardia dioxanivorans CB1190 10367973 YP_004336074.1 CDS Psed_6119 NC_015312.1 6474799 6475680 R TIGRFAM: Pantoate-beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase; KEGG: svi:Svir_35550 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantothenate synthetase complement(6474799..6475680) Pseudonocardia dioxanivorans CB1190 10367974 YP_004336075.1 CDS Psed_6120 NC_015312.1 6475677 6476570 R PFAM: oxidoreductase/dehydrogenase, Rossmann-like domain; Domain of unknown function DUF2520; KEGG: amd:AMED_8739 oxidoreductase; oxidoreductase/dehydrogenase, Rossmann-like domain-containing protein complement(6475677..6476570) Pseudonocardia dioxanivorans CB1190 10367975 YP_004336076.1 CDS Psed_6121 NC_015312.1 6476769 6478142 R KEGG: ami:Amir_0323 hypothetical protein; hypothetical protein complement(6476769..6478142) Pseudonocardia dioxanivorans CB1190 10367976 YP_004336077.1 CDS Psed_6122 NC_015312.1 6478185 6478664 R KEGG: sen:SACE_0402 hypothetical protein; hypothetical protein complement(6478185..6478664) Pseudonocardia dioxanivorans CB1190 10367977 YP_004336078.1 CDS Psed_6123 NC_015312.1 6478661 6479185 R TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: sen:SACE_0400 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(6478661..6479185) Pseudonocardia dioxanivorans CB1190 10367978 YP_004336079.1 CDS Psed_6124 NC_015312.1 6479182 6479580 R SMART: Dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; KEGG: mjl:Mjls_5153 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; dihydroneopterin aldolase complement(6479182..6479580) Pseudonocardia dioxanivorans CB1190 10367979 YP_004336080.1 CDS Psed_6125 NC_015312.1 6479577 6480440 R TIGRFAM: Dihydropteroate synthase; KEGG: svi:Svir_35630 dihydropteroate synthase; PFAM: Pterin-binding; dihydropteroate synthase complement(6479577..6480440) Pseudonocardia dioxanivorans CB1190 10367980 YP_004336081.1 CDS Psed_6126 NC_015312.1 6480444 6481061 R PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: mva:Mvan_5371 GTP cyclohydrolase I; GTP cyclohydrolase I complement(6480444..6481061) Pseudonocardia dioxanivorans CB1190 10367981 YP_004336082.1 CDS Psed_6127 NC_015312.1 6481064 6483520 R SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: amd:AMED_8748 cell division protease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH complement(6481064..6483520) Pseudonocardia dioxanivorans CB1190 10367982 YP_004336083.1 CDS Psed_6128 NC_015312.1 6483879 6484826 D KEGG: uma:UM02006.1 hypothetical protein; hypothetical protein 6483879..6484826 Pseudonocardia dioxanivorans CB1190 10367983 YP_004336084.1 CDS Psed_6129 NC_015312.1 6484851 6485411 R TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: sen:SACE_0395 hypoxanthine-guanine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(6484851..6485411) Pseudonocardia dioxanivorans CB1190 10367984 YP_004336085.1 CDS Psed_6130 NC_015312.1 6485488 6486474 R TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: Lysidine-tRNA(Ile) synthetase; KEGG: amd:AMED_8754 cell cycle protein MesJ; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; tRNA(Ile)-lysidine synthase complement(6485488..6486474) Pseudonocardia dioxanivorans CB1190 10367985 YP_004336086.1 CDS Psed_6131 NC_015312.1 6486485 6487546 R KEGG: svi:Svir_35720 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP003883, coenzyme F420 biosynthesis associated; Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342; hypothetical protein complement(6486485..6487546) Pseudonocardia dioxanivorans CB1190 10367986 YP_004336087.1 CDS Psed_6132 NC_015312.1 6487663 6489078 R KEGG: sen:SACE_0392 hypothetical protein; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(6487663..6489078) Pseudonocardia dioxanivorans CB1190 10367987 YP_004336088.1 CDS Psed_6133 NC_015312.1 6489240 6489743 D HAMAP: Inorganic pyrophosphatase; KEGG: sen:SACE_0391 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase 6489240..6489743 Pseudonocardia dioxanivorans CB1190 10367988 YP_004336089.1 CDS Psed_6134 NC_015312.1 6489857 6490699 R KEGG: kfl:Kfla_6903 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase complement(6489857..6490699) Pseudonocardia dioxanivorans CB1190 10367989 YP_004336090.1 CDS Psed_6135 NC_015312.1 6490696 6491088 R PFAM: Endoribonuclease L-PSP; KEGG: tbi:Tbis_2099 endoribonuclease L-PSP; endoribonuclease L-PSP complement(6490696..6491088) Pseudonocardia dioxanivorans CB1190 10367990 YP_004336091.1 CDS Psed_6136 NC_015312.1 6491075 6492292 R PFAM: vWA containing CoxE-like; KEGG: tro:trd_1210 VWA domain containing CoxE-like protein; von Willebrand factor A complement(6491075..6492292) Pseudonocardia dioxanivorans CB1190 10367991 YP_004336092.1 CDS Psed_6137 NC_015312.1 6492289 6493209 R KEGG: aeh:Mlg_1565 ATPase; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; ATPase complement(6492289..6493209) Pseudonocardia dioxanivorans CB1190 10367992 YP_004336093.1 CDS Psed_6138 NC_015312.1 6493202 6493804 R KEGG: ttr:Tter_2234 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(6493202..6493804) Pseudonocardia dioxanivorans CB1190 10367993 YP_004336094.1 CDS Psed_6139 NC_015312.1 6493804 6494640 R PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: rca:Rcas_0841 molybdopterin dehydrogenase FAD-binding; molybdopterin dehydrogenase FAD-binding protein complement(6493804..6494640) Pseudonocardia dioxanivorans CB1190 10367994 YP_004336095.1 CDS Psed_6140 NC_015312.1 6494640 6497132 R KEGG: cwo:Cwoe_4103 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(6494640..6497132) Pseudonocardia dioxanivorans CB1190 10367995 YP_004336096.1 CDS Psed_6141 NC_015312.1 6497143 6497547 R hypothetical protein complement(6497143..6497547) Pseudonocardia dioxanivorans CB1190 10367996 YP_004336097.1 CDS Psed_6142 NC_015312.1 6497558 6498688 R PFAM: FAD dependent oxidoreductase; KEGG: rhi:NGR_b01290 monooxygenase; FAD dependent oxidoreductase complement(6497558..6498688) Pseudonocardia dioxanivorans CB1190 10367997 YP_004336098.1 CDS Psed_6143 NC_015312.1 6498738 6500156 R PFAM: Amino acid permease domain; KEGG: dae:Dtox_3628 amino acid permease-associated region; amino acid permease complement(6498738..6500156) Pseudonocardia dioxanivorans CB1190 10367998 YP_004336099.1 CDS Psed_6144 NC_015312.1 6500231 6501670 R PFAM: Amidohydrolase 1; KEGG: ppu:PP_3194 hypothetical protein; amidohydrolase complement(6500231..6501670) Pseudonocardia dioxanivorans CB1190 10367999 YP_004336100.1 CDS Psed_6145 NC_015312.1 6501871 6504939 R PFAM: Bacterial transcriptional activator domain; KEGG: ach:Achl_4571 transcriptional activator domain protein; transcriptional activator domain-containing protein complement(6501871..6504939) Pseudonocardia dioxanivorans CB1190 10368000 YP_004336101.1 CDS Psed_6146 NC_015312.1 6505004 6505831 D PFAM: Alpha/beta hydrolase fold-1; KEGG: ttr:Tter_0115 alpha/beta hydrolase fold protein; alpha/beta hydrolase 6505004..6505831 Pseudonocardia dioxanivorans CB1190 10368001 YP_004336102.1 CDS Psed_6147 NC_015312.1 6505943 6506503 R KEGG: amd:AMED_9127 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator complement(6505943..6506503) Pseudonocardia dioxanivorans CB1190 10368002 YP_004336103.1 CDS Psed_6148 NC_015312.1 6506519 6507730 R TIGRFAM: Thiolase; KEGG: gob:Gobs_3827 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase complement(6506519..6507730) Pseudonocardia dioxanivorans CB1190 10368003 YP_004336104.1 CDS Psed_6149 NC_015312.1 6507790 6508302 R KEGG: tcu:Tcur_1474 enoyl-CoA hydratase; PFAM: MaoC-like dehydratase; enoyl-CoA hydratase complement(6507790..6508302) Pseudonocardia dioxanivorans CB1190 10368004 YP_004336105.1 CDS Psed_6150 NC_015312.1 6508518 6509447 D PFAM: ATPase-like, ATP-binding domain; KEGG: fra:Francci3_0218 serine/threonine kinase anti-sigma factor; ATP-binding protein 6508518..6509447 Pseudonocardia dioxanivorans CB1190 10368005 YP_004336106.1 CDS Psed_6151 NC_015312.1 6509485 6510294 D KEGG: ade:Adeh_1215 hypothetical protein; hypothetical protein 6509485..6510294 Pseudonocardia dioxanivorans CB1190 10368006 YP_004336107.1 CDS Psed_6152 NC_015312.1 6510367 6511176 D PFAM: Survival protein SurE-like phosphatase/nucleotidase; KEGG: msm:MSMEG_6820 acid phosphatase SurE; Survival protein SurE 6510367..6511176 Pseudonocardia dioxanivorans CB1190 10368007 YP_004336108.1 CDS Psed_6153 NC_015312.1 6511266 6511433 D hypothetical protein 6511266..6511433 Pseudonocardia dioxanivorans CB1190 10368008 YP_004336109.1 CDS Psed_6154 NC_015312.1 6511483 6511872 R KEGG: amd:AMED_4129 hypothetical protein; hypothetical protein complement(6511483..6511872) Pseudonocardia dioxanivorans CB1190 10368009 YP_004336110.1 CDS Psed_6155 NC_015312.1 6511916 6513064 R KEGG: sen:SACE_7037 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase complement(6511916..6513064) Pseudonocardia dioxanivorans CB1190 10368010 YP_004336111.1 CDS Psed_6156 NC_015312.1 6513068 6515068 R PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: amd:AMED_7921 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit; SMART: Biotin carboxylase, C-terminal; methylcrotonoyl-CoA carboxylase complement(6513068..6515068) Pseudonocardia dioxanivorans CB1190 10368011 YP_004336112.1 CDS Psed_6157 NC_015312.1 6515175 6516767 R KEGG: ami:Amir_6230 propionyl-CoA carboxylase; PFAM: Carboxyl transferase; methylcrotonoyl-CoA carboxylase complement(6515175..6516767) Pseudonocardia dioxanivorans CB1190 10368012 YP_004336113.1 CDS Psed_6158 NC_015312.1 6516954 6517190 D hypothetical protein 6516954..6517190 Pseudonocardia dioxanivorans CB1190 10368013 YP_004336114.1 CDS Psed_6159 NC_015312.1 6517298 6517882 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msp:Mspyr1_19800 transcriptional regulator, TetR family; TetR family transcriptional regulator 6517298..6517882 Pseudonocardia dioxanivorans CB1190 10368014 YP_004336115.1 CDS Psed_6160 NC_015312.1 6518065 6519987 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: ami:Amir_4284 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(6518065..6519987) Pseudonocardia dioxanivorans CB1190 10368015 YP_004336116.1 CDS Psed_6161 NC_015312.1 6520040 6520858 R PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting; KEGG: aau:AAur_0386 iron-chelator utilization protein; Siderophore-interacting protein complement(6520040..6520858) Pseudonocardia dioxanivorans CB1190 10368016 YP_004336117.1 CDS Psed_6162 NC_015312.1 6520938 6521162 R KEGG: fre:Franean1_5943 MbtH domain-containing protein; PFAM: MbtH-like protein; SMART: MbtH-like protein; balhimycin biosynthetic protein MbtH complement(6520938..6521162) Pseudonocardia dioxanivorans CB1190 10368017 YP_004336118.1 CDS Psed_6163 NC_015312.1 6521342 6521680 D KEGG: stp:Strop_2011 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 6521342..6521680 Pseudonocardia dioxanivorans CB1190 10368018 YP_004336119.1 CDS Psed_6164 NC_015312.1 6521781 6524567 D HAMAP: Phosphoenolpyruvate carboxylase, bacterial/plant-type; KEGG: fal:FRAAL0594 phosphoenolpyruvate carboxylase (PEPCase) (PepC); PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 6521781..6524567 Pseudonocardia dioxanivorans CB1190 10368019 YP_004336120.1 CDS Psed_6165 NC_015312.1 6524619 6525377 D KEGG: ach:Achl_0177 LamB/YcsF family protein; HAMAP: Uncharacterised protein family UPF0271, LamB/YcsF; PFAM: Uncharacterised protein family UPF0271, LamB/YcsF; hypothetical protein 6524619..6525377 Pseudonocardia dioxanivorans CB1190 10368020 YP_004336121.1 CDS Psed_6166 NC_015312.1 6525438 6526070 D TIGRFAM: Conserved hypothetical protein CHP00370; PFAM: Allophanate hydrolase subunit 1; KEGG: nda:Ndas_3557 allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; hypothetical protein 6525438..6526070 Pseudonocardia dioxanivorans CB1190 10368021 YP_004336122.1 CDS Psed_6167 NC_015312.1 6526067 6526915 D SMART: Allophanate hydrolase subunit 2; TIGRFAM: Allophanate hydrolase subunit 2; KEGG: sen:SACE_1552 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; urea amidolyase 6526067..6526915 Pseudonocardia dioxanivorans CB1190 10368022 YP_004336123.1 CDS Psed_6168 NC_015312.1 6527116 6528810 D TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: svi:Svir_34570 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; phosphomethylpyrimidine synthase 6527116..6528810 Pseudonocardia dioxanivorans CB1190 10368023 YP_004336124.1 CDS Psed_6169 NC_015312.1 6528905 6529285 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_0703 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(6528905..6529285) Pseudonocardia dioxanivorans CB1190 10368024 YP_004336125.1 CDS Psed_6170 NC_015312.1 6529377 6529781 D KEGG: ddr:Deide_2p01800 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 6529377..6529781 Pseudonocardia dioxanivorans CB1190 10368025 YP_004336126.1 CDS Psed_6171 NC_015312.1 6529803 6531290 R KEGG: tcu:Tcur_2183 adenylate/guanylate cyclase with integral membrane sensor; PFAM: HAMP linker domain; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: HAMP linker domain; Adenylyl cyclase class-3/4/guanylyl cyclase; guanylate cyclase complement(6529803..6531290) Pseudonocardia dioxanivorans CB1190 10368026 YP_004336127.1 CDS Psed_6172 NC_015312.1 6531317 6532147 R PFAM: MaoC-like dehydratase; KEGG: gob:Gobs_0308 MaoC domain-containing protein dehydratase; acyl dehydratase MaoC complement(6531317..6532147) Pseudonocardia dioxanivorans CB1190 10368027 YP_004336128.1 CDS Psed_6173 NC_015312.1 6532147 6533523 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gob:Gobs_0307 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 3-oxoacyl-ACP reductase complement(6532147..6533523) Pseudonocardia dioxanivorans CB1190 10368028 YP_004336129.1 CDS Psed_6174 NC_015312.1 6533523 6534803 R TIGRFAM: Thiolase; KEGG: gob:Gobs_0306 acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal; Thiolase, N-terminal; acetyl-CoA acetyltransferase complement(6533523..6534803) Pseudonocardia dioxanivorans CB1190 10368029 YP_004336130.1 CDS Psed_6175 NC_015312.1 6534881 6535513 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: gob:Gobs_0305 TetR family transcriptional regulator; TetR family transcriptional regulator 6534881..6535513 Pseudonocardia dioxanivorans CB1190 10368030 YP_004336131.1 CDS Psed_6176 NC_015312.1 6535510 6537414 D KEGG: cai:Caci_3363 acyl-CoA oxidase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase, C-terminal; acyl-CoA oxidase 6535510..6537414 Pseudonocardia dioxanivorans CB1190 10368031 YP_004336132.1 CDS Psed_6177 NC_015312.1 6537431 6538357 R PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: sen:SACE_4681 zinc-binding NADP-dependent dehydrogenase; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase complement(6537431..6538357) Pseudonocardia dioxanivorans CB1190 10368032 YP_004336133.1 CDS Psed_6178 NC_015312.1 6538532 6539140 R KEGG: xce:Xcel_3194 hypothetical protein; hypothetical protein complement(6538532..6539140) Pseudonocardia dioxanivorans CB1190 10368033 YP_004336134.1 CDS Psed_6179 NC_015312.1 6539386 6540618 D PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: amd:AMED_6110 transposase; transposase IS111A/IS1328/IS1533 6539386..6540618 Pseudonocardia dioxanivorans CB1190 10368034 YP_004336135.1 CDS Psed_6180 NC_015312.1 6540596 6540694 R hypothetical protein complement(6540596..6540694) Pseudonocardia dioxanivorans CB1190 10368035 YP_004336136.1 CDS Psed_6181 NC_015312.1 6540701 6541816 R PFAM: Domain of unknown function DUF1205; KEGG: sec:SC2704 glycosyl transferase, related to UDP-glucuronosyltransferase; hypothetical protein complement(6540701..6541816) Pseudonocardia dioxanivorans CB1190 10368036 YP_004336137.1 CDS Psed_6182 NC_015312.1 6541835 6542998 R KEGG: ach:Achl_2244 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; kynurenine--oxoglutarate transaminase complement(6541835..6542998) Pseudonocardia dioxanivorans CB1190 10368037 YP_004336138.1 CDS Psed_6183 NC_015312.1 6543076 6544179 D PFAM: Integrase, catalytic core; KEGG: sen:SACE_5133 IS630 family transposase; integrase catalytic subunit 6543076..6544179 Pseudonocardia dioxanivorans CB1190 10368038 YP_004336139.1 CDS Psed_6184 NC_015312.1 6544187 6545818 R KEGG: sen:SACE_3554 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Alpha/beta hydrolase fold-1; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR complement(6544187..6545818) Pseudonocardia dioxanivorans CB1190 10368039 YP_004336140.1 CDS Psed_6185 NC_015312.1 6545906 6547246 D KEGG: gob:Gobs_3432 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; Bcr/CflA subfamily drug resistance transporter 6545906..6547246 Pseudonocardia dioxanivorans CB1190 10368040 YP_004336141.1 CDS Psed_6187 NC_015312.1 6547475 6548008 R PFAM: Transcription regulator PadR N-terminal-like; KEGG: sen:SACE_0174 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator complement(6547475..6548008) Pseudonocardia dioxanivorans CB1190 10368042 YP_004336142.1 CDS Psed_6188 NC_015312.1 6548128 6549504 D KEGG: fal:FRAAL0273 dioxygenase; PFAM: Carotenoid oxygenase; 9-cis-epoxycarotenoid dioxygenase 6548128..6549504 Pseudonocardia dioxanivorans CB1190 10368043 YP_004336143.1 CDS Psed_6189 NC_015312.1 6549506 6550174 D KEGG: sen:SACE_0172 hypothetical protein; hypothetical protein 6549506..6550174 Pseudonocardia dioxanivorans CB1190 10368044 YP_004336144.1 CDS Psed_6190 NC_015312.1 6550337 6551026 D KEGG: fri:FraEuI1c_3823 PASTA domain containing protein; PFAM: PASTA; SMART: PASTA; protein PASTA domain-containing protein 6550337..6551026 Pseudonocardia dioxanivorans CB1190 10368045 YP_004336145.1 CDS Psed_6191 NC_015312.1 6551137 6551487 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kfl:Kfla_2674 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(6551137..6551487) Pseudonocardia dioxanivorans CB1190 10368046 YP_004336146.1 CDS Psed_6192 NC_015312.1 6551484 6552167 R PFAM: Protein of unknown function DUF161; KEGG: ami:Amir_6791 protein of unknown function DUF161; hypothetical protein complement(6551484..6552167) Pseudonocardia dioxanivorans CB1190 10368047 YP_004336147.1 CDS Psed_6193 NC_015312.1 6552294 6554186 D PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: sgr:SGR_6589 ABC transporter ATPase and permease component; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 6552294..6554186 Pseudonocardia dioxanivorans CB1190 10368048 YP_004336148.1 CDS Psed_6194 NC_015312.1 6554201 6554497 R KEGG: sro:Sros_9035 hypothetical protein; hypothetical protein complement(6554201..6554497) Pseudonocardia dioxanivorans CB1190 10368049 YP_004336149.1 CDS Psed_6195 NC_015312.1 6554559 6555233 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_9036 transcriptional regulator, TetR family; TetR family transcriptional regulator 6554559..6555233 Pseudonocardia dioxanivorans CB1190 10368050 YP_004336150.1 CDS Psed_6196 NC_015312.1 6555272 6555760 R PFAM: Domain of unknown function DUF151; KEGG: svi:Svir_22570 hypothetical protein; hypothetical protein complement(6555272..6555760) Pseudonocardia dioxanivorans CB1190 10368051 YP_004336151.1 CDS Psed_6197 NC_015312.1 6555860 6557173 R PFAM: Major facilitator superfamily MFS-1; KEGG: mmi:MMAR_2797 sialic acid-transport integral membrane protein NanT; major facilitator superfamily protein complement(6555860..6557173) Pseudonocardia dioxanivorans CB1190 10368052 YP_004336152.1 CDS Psed_6198 NC_015312.1 6557307 6557774 D KEGG: smd:Smed_2207 hypothetical protein; hypothetical protein 6557307..6557774 Pseudonocardia dioxanivorans CB1190 10368053 YP_004336153.1 CDS Psed_6199 NC_015312.1 6557779 6558996 D KEGG: tcu:Tcur_3194 heat shock protein DnaJ domain-containing protein; molecular chaperone DnaJ 6557779..6558996 Pseudonocardia dioxanivorans CB1190 10368054 YP_004336154.1 CDS Psed_6200 NC_015312.1 6559003 6559641 R PFAM: PspA/IM30; KEGG: fra:Francci3_2228 phage shock protein A, PspA; PspA/IM30 family protein complement(6559003..6559641) Pseudonocardia dioxanivorans CB1190 10368055 YP_004336155.1 CDS Psed_6201 NC_015312.1 6559657 6561147 R KEGG: nml:Namu_4252 amino acid/peptide transporter; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter; amino acid/peptide transporter complement(6559657..6561147) Pseudonocardia dioxanivorans CB1190 10368056 YP_004336156.1 CDS Psed_6202 NC_015312.1 6561318 6562370 R KEGG: bbt:BBta_1128 monooxygenase of the alternative pyrimidine degradation pathway; TIGRFAM: Luciferase-like, pyrimidine utilisation protein RutA; PFAM: Luciferase-like, subgroup; pyrimidine utilization protein A complement(6561318..6562370) Pseudonocardia dioxanivorans CB1190 10368057 YP_004336157.1 CDS Psed_6203 NC_015312.1 6562372 6563421 R PFAM: Luciferase-like, subgroup; KEGG: hje:HacjB3_02270 luciferase-like monooxygenase; luciferase-like protein complement(6562372..6563421) Pseudonocardia dioxanivorans CB1190 10368058 YP_004336158.1 CDS Psed_6204 NC_015312.1 6563411 6564805 R PFAM: MmgE/PrpD; KEGG: bxe:Bxe_A4086 hypothetical protein; MmgE/PrpD family protein complement(6563411..6564805) Pseudonocardia dioxanivorans CB1190 10368059 YP_004336159.1 CDS Psed_6205 NC_015312.1 6564821 6566245 R PFAM: Amidase; KEGG: sro:Sros_0559 amidase; amidase complement(6564821..6566245) Pseudonocardia dioxanivorans CB1190 10368060 YP_004336160.1 CDS Psed_6206 NC_015312.1 6566242 6566460 R hypothetical protein complement(6566242..6566460) Pseudonocardia dioxanivorans CB1190 10368061 YP_004336161.1 CDS Psed_6207 NC_015312.1 6566457 6567620 R KEGG: nca:Noca_4073 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; butyryl-CoA dehydrogenase complement(6566457..6567620) Pseudonocardia dioxanivorans CB1190 10368062 YP_004336162.1 CDS Psed_6208 NC_015312.1 6567622 6568842 R KEGG: sro:Sros_6624 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase III; formyl-CoA transferase complement(6567622..6568842) Pseudonocardia dioxanivorans CB1190 10368063 YP_004336163.1 CDS Psed_6209 NC_015312.1 6568960 6569718 D KEGG: fre:Franean1_1994 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator 6568960..6569718 Pseudonocardia dioxanivorans CB1190 10368064 YP_004336164.1 CDS Psed_6210 NC_015312.1 6570030 6571442 D PFAM: NLP/P60; KEGG: req:REQ_28170 peptidase; NLP/P60 protein 6570030..6571442 Pseudonocardia dioxanivorans CB1190 10368065 YP_004336165.1 CDS Psed_6211 NC_015312.1 6571899 6573518 D PFAM: NLP/P60; KEGG: mkm:Mkms_3349 NLP/P60 protein; NLP/P60 protein 6571899..6573518 Pseudonocardia dioxanivorans CB1190 10368066 YP_004336166.1 CDS Psed_6212 NC_015312.1 6573554 6574552 R KEGG: gob:Gobs_0789 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; trans-1,2-dihydrobenzene-1,2-diol dehydrogenase complement(6573554..6574552) Pseudonocardia dioxanivorans CB1190 10368067 YP_004336167.1 CDS Psed_6213 NC_015312.1 6574641 6575201 R KEGG: nca:Noca_0273 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; 2'-5' RNA ligase complement(6574641..6575201) Pseudonocardia dioxanivorans CB1190 10368068 YP_004336168.1 CDS Psed_6214 NC_015312.1 6575203 6576126 R KEGG: gob:Gobs_2269 beta-lactamase domain-containing protein; HAMAP: Ribonuclease Z; PFAM: Beta-lactamase-like; Ribonuclease Z complement(6575203..6576126) Pseudonocardia dioxanivorans CB1190 10368069 YP_004336169.1 CDS Psed_6215 NC_015312.1 6576131 6576592 R KEGG: cwo:Cwoe_4105 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase complement(6576131..6576592) Pseudonocardia dioxanivorans CB1190 10368070 YP_004336170.1 CDS Psed_6216 NC_015312.1 6576602 6577402 R KEGG: rhi:NGR_c05970 carbon monoxide dehydrogenase medium chain; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase complement(6576602..6577402) Pseudonocardia dioxanivorans CB1190 10368071 YP_004336171.1 CDS Psed_6217 NC_015312.1 6577452 6578198 R KEGG: fre:Franean1_2500 enoyl-CoA hydratase; PFAM: Crotonase, core; Peptidase S49; enoyl-CoA hydratase complement(6577452..6578198) Pseudonocardia dioxanivorans CB1190 10368072 YP_004336172.1 CDS Psed_6218 NC_015312.1 6578191 6580557 R KEGG: sti:Sthe_2811 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase complement(6578191..6580557) Pseudonocardia dioxanivorans CB1190 10368073 YP_004336173.1 CDS Psed_6219 NC_015312.1 6580554 6581318 R KEGG: rhi:NGR_c06050 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(6580554..6581318) Pseudonocardia dioxanivorans CB1190 10368074 YP_004336174.1 CDS Psed_6220 NC_015312.1 6581330 6582124 R KEGG: kfl:Kfla_1519 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase complement(6581330..6582124) Pseudonocardia dioxanivorans CB1190 10368075 YP_004336175.1 CDS Psed_6221 NC_015312.1 6582121 6583650 R KEGG: sen:SACE_2875 modular polyketide synthase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase complement(6582121..6583650) Pseudonocardia dioxanivorans CB1190 10368076 YP_004336176.1 CDS Psed_6222 NC_015312.1 6583704 6584303 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1887 TetR family transcriptional regulator; TetR family transcriptional regulator complement(6583704..6584303) Pseudonocardia dioxanivorans CB1190 10368077 YP_004336177.1 CDS Psed_6223 NC_015312.1 6584428 6585192 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ami:Amir_2728 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 6584428..6585192 Pseudonocardia dioxanivorans CB1190 10368078 YP_004336178.1 CDS Psed_6224 NC_015312.1 6585235 6585426 R hypothetical protein complement(6585235..6585426) Pseudonocardia dioxanivorans CB1190 10368079 YP_004336179.1 CDS Psed_6225 NC_015312.1 6585602 6586729 R PFAM: Uncharacterised conserved protein UCP007542; KEGG: rer:RER_23850 hypothetical protein; hypothetical protein complement(6585602..6586729) Pseudonocardia dioxanivorans CB1190 10368080 YP_004336180.1 CDS Psed_6226 NC_015312.1 6586726 6587637 R PFAM: Protein of unknown function DUF1023; KEGG: sco:SCO3760 secreted protein; hypothetical protein complement(6586726..6587637) Pseudonocardia dioxanivorans CB1190 10368081 YP_004336181.1 CDS Psed_6227 NC_015312.1 6587728 6588393 R KEGG: cai:Caci_8900 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6587728..6588393) Pseudonocardia dioxanivorans CB1190 10368082 YP_004336182.1 CDS Psed_6228 NC_015312.1 6588390 6589670 R PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: ami:Amir_6236 histidine kinase; histidine kinase complement(6588390..6589670) Pseudonocardia dioxanivorans CB1190 10368083 YP_004336183.1 CDS Psed_6229 NC_015312.1 6589712 6590587 D KEGG: tcu:Tcur_1622 threonine ammonia-lyase; manually curated; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 6589712..6590587 Pseudonocardia dioxanivorans CB1190 10368084 YP_004336184.1 CDS Psed_6230 NC_015312.1 6590610 6591014 R TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: mmi:MMAR_0209 glycine cleavage system H protein GcvH_1; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein complement(6590610..6591014) Pseudonocardia dioxanivorans CB1190 10368085 YP_004336185.1 CDS Psed_6231 NC_015312.1 6591255 6591875 D KEGG: cwo:Cwoe_2578 transcriptional regulator, XRE family; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; cupin 6591255..6591875 Pseudonocardia dioxanivorans CB1190 10368086 YP_004336186.1 CDS Psed_6232 NC_015312.1 6591930 6592928 D PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; KEGG: scl:sce8999 hypothetical protein; AIR synthase-like protein domain-containing protein 6591930..6592928 Pseudonocardia dioxanivorans CB1190 10368087 YP_004336187.1 CDS Psed_6233 NC_015312.1 6592956 6593879 D TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: vap:Vapar_2967 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; 2-dehydropantoate 2-reductase 6592956..6593879 Pseudonocardia dioxanivorans CB1190 10368088 YP_004336188.1 CDS Psed_6234 NC_015312.1 6593895 6594965 R PFAM: Luciferase-like, subgroup; KEGG: sen:SACE_3003 FMN-dependent monooxygenase; luciferase-like protein complement(6593895..6594965) Pseudonocardia dioxanivorans CB1190 10368089 YP_004336189.1 CDS Psed_6235 NC_015312.1 6594962 6595504 R PFAM: Polyketide cyclase/dehydrase; KEGG: amd:AMED_7647 cyclase/dehydrase; polyketide cyclase/dehydrase complement(6594962..6595504) Pseudonocardia dioxanivorans CB1190 10368090 YP_004336190.1 CDS Psed_6236 NC_015312.1 6595566 6596744 R HAMAP: Phosphoglycerate kinase; KEGG: sen:SACE_2144 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase complement(6595566..6596744) Pseudonocardia dioxanivorans CB1190 10368091 YP_004336191.1 CDS Psed_6237 NC_015312.1 6596741 6597760 R SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tbi:Tbis_1993 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase complement(6596741..6597760) Pseudonocardia dioxanivorans CB1190 10368092 YP_004336192.1 CDS Psed_6238 NC_015312.1 6597848 6598630 R KEGG: tkm:TK90_0853 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(6597848..6598630) Pseudonocardia dioxanivorans CB1190 10368093 YP_004336193.1 CDS Psed_6239 NC_015312.1 6598991 6600004 D PFAM: Fructose-bisphosphate aldolase, class-I; KEGG: afo:Afer_0177 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase class-I 6598991..6600004 Pseudonocardia dioxanivorans CB1190 10368094 YP_004336194.1 CDS Psed_6240 NC_015312.1 6600216 6601193 D KEGG: mta:Moth_1948 carbamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; carbamate kinase 6600216..6601193 Pseudonocardia dioxanivorans CB1190 10368095 YP_004336195.1 CDS Psed_6241 NC_015312.1 6601279 6601842 R hypothetical protein complement(6601279..6601842) Pseudonocardia dioxanivorans CB1190 10368096 YP_004336196.1 CDS Psed_6242 NC_015312.1 6602082 6603047 D PFAM: Fructose-bisphosphate aldolase, class-I; KEGG: tkm:TK90_1149 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase class-I 6602082..6603047 Pseudonocardia dioxanivorans CB1190 10368097 YP_004336197.1 CDS Psed_6243 NC_015312.1 6603107 6604054 R PFAM: Phosphoribulokinase/uridine kinase; KEGG: tcu:Tcur_1650 phosphoribulokinase/uridine kinase; phosphoribulokinase/uridine kinase complement(6603107..6604054) Pseudonocardia dioxanivorans CB1190 10368098 YP_004336198.1 CDS Psed_6244 NC_015312.1 6604069 6606102 R SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: bts:Btus_2647 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase complement(6604069..6606102) Pseudonocardia dioxanivorans CB1190 10368099 YP_004336199.1 CDS Psed_6245 NC_015312.1 6606263 6606934 D KEGG: mjl:Mjls_1083 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6606263..6606934 Pseudonocardia dioxanivorans CB1190 10368100 YP_004336200.1 CDS Psed_6246 NC_015312.1 6606960 6608225 D KEGG: msm:MSMEG_1493 sensor histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; GAF; ATPase-like, ATP-binding domain; SMART: GAF; ATPase-like, ATP-binding domain; GAF sensor signal transduction histidine kinase 6606960..6608225 Pseudonocardia dioxanivorans CB1190 10368101 YP_004336201.1 CDS Psed_6247 NC_015312.1 6608376 6609686 R PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit complement(6608376..6609686) Pseudonocardia dioxanivorans CB1190 10368102 YP_004336202.1 CDS Psed_6248 NC_015312.1 6609831 6610856 R KEGG: mes:Meso_3436 fructose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase, class-I; Fructose-bisphosphate aldolase complement(6609831..6610856) Pseudonocardia dioxanivorans CB1190 10368103 YP_004336203.1 CDS Psed_6249 NC_015312.1 6611028 6612458 D HAMAP: Ribulose bisphosphate carboxylase, large subunit; KEGG: tcu:Tcur_1655 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; ribulose bisphosphate carboxylase large chain 6611028..6612458 Pseudonocardia dioxanivorans CB1190 10368104 YP_004336204.1 CDS Psed_6250 NC_015312.1 6612473 6612898 D PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: tcu:Tcur_1656 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain; ribulose-bisphosphate carboxylase 6612473..6612898 Pseudonocardia dioxanivorans CB1190 10368105 YP_004336205.1 CDS Psed_6251 NC_015312.1 6612902 6613930 D TIGRFAM: CbxX/CfqX, monofunctional; PFAM: ATPase, AAA-type, core; KEGG: tcu:Tcur_1657 CbbX protein; SMART: ATPase, AAA+ type, core; CbbX protein 6612902..6613930 Pseudonocardia dioxanivorans CB1190 10368106 YP_004336206.1 CDS Psed_6252 NC_015312.1 6613967 6614863 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcu:Tcur_1654 LysR family transcriptional regulator; LysR family transcriptional regulator 6613967..6614863 Pseudonocardia dioxanivorans CB1190 10368107 YP_004336207.1 CDS Psed_6253 NC_015312.1 6615235 6616323 D KEGG: sti:Sthe_1846 hypothetical protein; hypothetical protein 6615235..6616323 Pseudonocardia dioxanivorans CB1190 10368108 YP_004336208.1 CDS Psed_6254 NC_015312.1 6616352 6617980 R KEGG: sti:Sthe_1229 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6616352..6617980) Pseudonocardia dioxanivorans CB1190 10368109 YP_004336209.1 CDS Psed_6255 NC_015312.1 6618035 6619147 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro04494 potassium uptake protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(6618035..6619147) Pseudonocardia dioxanivorans CB1190 10368110 YP_004336210.1 CDS Psed_6256 NC_015312.1 6619277 6619714 R KEGG: shl:Shal_0400 hypothetical protein; hypothetical protein complement(6619277..6619714) Pseudonocardia dioxanivorans CB1190 10368111 YP_004336211.1 CDS Psed_6257 NC_015312.1 6619868 6620773 D PFAM: Ribonuclease BN-related; KEGG: sen:SACE_6591 tRNA-processing ribonuclease BN; ribonuclease BN 6619868..6620773 Pseudonocardia dioxanivorans CB1190 10368112 YP_004336212.1 CDS Psed_6258 NC_015312.1 6620830 6621741 R KEGG: req:REQ_28540 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein complement(6620830..6621741) Pseudonocardia dioxanivorans CB1190 10368113 YP_004336213.1 CDS Psed_6259 NC_015312.1 6621734 6623107 R TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: kra:Krad_3462 monoxygenase; nitrilotriacetate monooxygenase FMN-dependent oxidoreductase complement(6621734..6623107) Pseudonocardia dioxanivorans CB1190 10368114 YP_004336214.1 CDS Psed_6260 NC_015312.1 6623104 6624735 R PFAM: ABC transporter-like; KEGG: mrd:Mrad2831_3305 ABC transporter related; SMART: ATPase, AAA+ type, core; monosaccharide-transporting ATPase complement(6623104..6624735) Pseudonocardia dioxanivorans CB1190 10368115 YP_004336215.1 CDS Psed_6261 NC_015312.1 6624728 6625717 R PFAM: ABC transporter permease; KEGG: cpy:Cphy_1259 inner-membrane translocator; ABC transporter permease complement(6624728..6625717) Pseudonocardia dioxanivorans CB1190 10368116 YP_004336216.1 CDS Psed_6262 NC_015312.1 6625714 6626595 R PFAM: ABC transporter permease; KEGG: sco:SCO7183 branched amino acid transport system permease; ABC transporter permease complement(6625714..6626595) Pseudonocardia dioxanivorans CB1190 10368117 YP_004336217.1 CDS Psed_6263 NC_015312.1 6626597 6627772 R PFAM: Extracellular ligand-binding receptor; KEGG: dat:HRM2_46760 extracellular ligand-binding receptor; ABC transporter substrate-binding protein complement(6626597..6627772) Pseudonocardia dioxanivorans CB1190 10368118 YP_004336218.1 CDS Psed_6264 NC_015312.1 6628066 6628848 D KEGG: req:REQ_28550 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator 6628066..6628848 Pseudonocardia dioxanivorans CB1190 10368119 YP_004336219.1 CDS Psed_6265 NC_015312.1 6628935 6629747 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tcu:Tcur_1455 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(6628935..6629747) Pseudonocardia dioxanivorans CB1190 10368120 YP_004336220.1 CDS Psed_6266 NC_015312.1 6629858 6631039 R KEGG: tcu:Tcur_1454 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(6629858..6631039) Pseudonocardia dioxanivorans CB1190 10368121 YP_004336221.1 CDS Psed_6267 NC_015312.1 6631039 6631788 R PFAM: ABC transporter-like; KEGG: tcu:Tcur_1453 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase complement(6631039..6631788) Pseudonocardia dioxanivorans CB1190 10368122 YP_004336222.1 CDS Psed_6268 NC_015312.1 6631764 6632804 R KEGG: tcu:Tcur_1452 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(6631764..6632804) Pseudonocardia dioxanivorans CB1190 10368123 YP_004336223.1 CDS Psed_6269 NC_015312.1 6632801 6633343 R KEGG: tcu:Tcur_1451 hypothetical protein; hypothetical protein complement(6632801..6633343) Pseudonocardia dioxanivorans CB1190 10368124 YP_004336224.1 CDS Psed_6270 NC_015312.1 6633669 6634292 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nfa:nfa21280 transcriptional regulator; TetR family transcriptional regulator 6633669..6634292 Pseudonocardia dioxanivorans CB1190 10368125 YP_004336225.1 CDS Psed_6271 NC_015312.1 6634547 6635680 D KEGG: amd:AMED_3568 hypothetical protein; hypothetical protein 6634547..6635680 Pseudonocardia dioxanivorans CB1190 10368126 YP_004336226.1 CDS Psed_6272 NC_015312.1 6636003 6637097 D KEGG: fre:Franean1_2312 integral membrane protein; integral membrane protein 6636003..6637097 Pseudonocardia dioxanivorans CB1190 10368127 YP_004336227.1 CDS Psed_6274 NC_015312.1 6637213 6638697 R PFAM: AMP-dependent synthetase/ligase; KEGG: rop:ROP_03140 hypothetical protein; AMP-dependent synthetase/ligase complement(6637213..6638697) Pseudonocardia dioxanivorans CB1190 10368129 YP_004336228.1 CDS Psed_6275 NC_015312.1 6638733 6639371 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: amd:AMED_6990 TetR family transcriptional regulator; TetR family transcriptional regulator complement(6638733..6639371) Pseudonocardia dioxanivorans CB1190 10368130 YP_004336229.1 CDS Psed_6276 NC_015312.1 6639528 6640937 D PFAM: Protein of unknown function DUF1116; KEGG: lhk:LHK_01303 DUF1116 domain containing protein; hypothetical protein 6639528..6640937 Pseudonocardia dioxanivorans CB1190 10368131 YP_004336230.1 CDS Psed_6277 NC_015312.1 6641173 6641685 D KEGG: gob:Gobs_2618 hypothetical protein; hypothetical protein 6641173..6641685 Pseudonocardia dioxanivorans CB1190 10368132 YP_004336231.1 CDS Psed_6278 NC_015312.1 6641666 6642052 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: svi:Svir_19260 glyoxalase/bleomycin resistance protein/dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase complement(6641666..6642052) Pseudonocardia dioxanivorans CB1190 10368133 YP_004336232.1 CDS Psed_6279 NC_015312.1 6642301 6643485 R PFAM: Glycosyl transferase, group 1; KEGG: scl:sce8998 secreted protein; group 1 glycosyl transferase complement(6642301..6643485) Pseudonocardia dioxanivorans CB1190 10368134 YP_004336233.1 CDS Psed_6280 NC_015312.1 6643482 6645023 R KEGG: tro:trd_0573 protein FdrA; protein FdrA complement(6643482..6645023) Pseudonocardia dioxanivorans CB1190 10368135 YP_004336234.1 CDS Psed_6281 NC_015312.1 6645020 6645997 R KEGG: kcr:Kcr_1250 carbamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; carbamate kinase complement(6645020..6645997) Pseudonocardia dioxanivorans CB1190 10368136 YP_004336235.1 CDS Psed_6282 NC_015312.1 6646125 6649337 D KEGG: tbi:Tbis_2669 winged helix family transcriptional regulator ATPase; PFAM: Signal transduction response regulator, C-terminal; Bacterial transcriptional activator domain; Tetratricopeptide TPR-1; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat; winged helix family transcriptional regulator 6646125..6649337 Pseudonocardia dioxanivorans CB1190 10368137 YP_004336236.1 CDS Psed_6283 NC_015312.1 6649379 6649918 R PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: rle:RL0658 hypothetical protein; GCN5-like N-acetyltransferase complement(6649379..6649918) Pseudonocardia dioxanivorans CB1190 10368138 YP_004336237.1 CDS Psed_6284 NC_015312.1 6649915 6650565 R hypothetical protein complement(6649915..6650565) Pseudonocardia dioxanivorans CB1190 10368139 YP_004336238.1 CDS Psed_6285 NC_015312.1 6650672 6651157 R KEGG: bge:BC1002_5635 hypothetical protein; hypothetical protein complement(6650672..6651157) Pseudonocardia dioxanivorans CB1190 10368140 YP_004336239.1 CDS Psed_6286 NC_015312.1 6651197 6651460 R hypothetical protein complement(6651197..6651460) Pseudonocardia dioxanivorans CB1190 10368141 YP_004336240.1 CDS Psed_6287 NC_015312.1 6651463 6652809 R KEGG: mmg:MTBMA_c17440 dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; CoA-disulfide reductase complement(6651463..6652809) Pseudonocardia dioxanivorans CB1190 10368142 YP_004336241.1 CDS Psed_6288 NC_015312.1 6653071 6653856 R KEGG: nca:Noca_4839 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA; phosphosulfolactate synthase complement(6653071..6653856) Pseudonocardia dioxanivorans CB1190 10368143 YP_004336242.1 CDS Psed_6289 NC_015312.1 6653942 6654199 R KEGG: amd:AMED_5011 hypothetical protein; hypothetical protein complement(6653942..6654199) Pseudonocardia dioxanivorans CB1190 10368144 YP_004336243.1 CDS Psed_6290 NC_015312.1 6654205 6654957 R PFAM: Dienelactone hydrolase; KEGG: ace:Acel_1423 carboxymethylenebutenolidase; dienelactone hydrolase complement(6654205..6654957) Pseudonocardia dioxanivorans CB1190 10368145 YP_004336244.1 CDS Psed_6291 NC_015312.1 6655019 6656377 R KEGG: dak:DaAHT2_2657 phosphonopyruvate decarboxylase-related protein; PFAM: Bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme; phosphoglycerate mutase complement(6655019..6656377) Pseudonocardia dioxanivorans CB1190 10368146 YP_004336245.1 CDS Psed_6292 NC_015312.1 6656374 6656916 R TIGRFAM: Cytidyltransferase-related; KEGG: pca:Pcar_0825 nicotinamide mononucleotide adenylyltransferase, OrfX-like; cytidyltransferase-related domain-containing protein complement(6656374..6656916) Pseudonocardia dioxanivorans CB1190 10368147 YP_004336246.1 CDS Psed_6293 NC_015312.1 6656913 6658163 R KEGG: ppw:PputW619_3157 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; isovaleryl-CoA dehydrogenase complement(6656913..6658163) Pseudonocardia dioxanivorans CB1190 10368148 YP_004336247.1 CDS Psed_6295 NC_015312.1 6658812 6659537 R PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: sco:SCO0804 hypothetical protein; LmbE family protein complement(6658812..6659537) Pseudonocardia dioxanivorans CB1190 10368150 YP_004336248.1 CDS Psed_6296 NC_015312.1 6659534 6660637 R PFAM: Domain of unknown function DUF88; KEGG: mil:ML5_5375 hypothetical protein; hypothetical protein complement(6659534..6660637) Pseudonocardia dioxanivorans CB1190 10368151 YP_004336249.1 CDS Psed_6297 NC_015312.1 6660693 6661151 R PFAM: Helix-turn-helix, HxlR type; KEGG: cai:Caci_1043 transcriptional regulator, HxlR family; HxlR family transcriptional regulator complement(6660693..6661151) Pseudonocardia dioxanivorans CB1190 10368152 YP_004336250.1 CDS Psed_6298 NC_015312.1 6661235 6661936 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: amd:AMED_1314 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 6661235..6661936 Pseudonocardia dioxanivorans CB1190 10368153 YP_004336251.1 CDS Psed_6299 NC_015312.1 6661943 6664741 R KEGG: ami:Amir_5315 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6661943..6664741) Pseudonocardia dioxanivorans CB1190 10368154 YP_004336252.1 CDS Psed_6300 NC_015312.1 6664880 6665386 D PFAM: Cupin 2, conserved barrel; KEGG: ace:Acel_0692 cupin 2 domain-containing protein; cupin 6664880..6665386 Pseudonocardia dioxanivorans CB1190 10368155 YP_004336253.1 CDS Psed_6301 NC_015312.1 6665415 6666158 R PFAM: Dienelactone hydrolase; KEGG: mjl:Mjls_2098 dienelactone hydrolase; dienelactone hydrolase complement(6665415..6666158) Pseudonocardia dioxanivorans CB1190 10368156 YP_004336254.1 CDS Psed_6302 NC_015312.1 6666463 6667200 D KEGG: ami:Amir_3938 hypothetical protein; hypothetical protein 6666463..6667200 Pseudonocardia dioxanivorans CB1190 10368157 YP_004336255.1 CDS Psed_6303 NC_015312.1 6667190 6667546 R KEGG: amd:AMED_4489 ATP-dependent DNA ligase; ATP-dependent DNA ligase complement(6667190..6667546) Pseudonocardia dioxanivorans CB1190 10368158 YP_004336256.1 CDS Psed_6304 NC_015312.1 6667577 6669388 R PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: nfa:nfa29480 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(6667577..6669388) Pseudonocardia dioxanivorans CB1190 10368159 YP_004336257.1 CDS Psed_6306 NC_015312.1 6669808 6671757 D PFAM: Beta-lactamase-related; KEGG: mxa:MXAN_2150 beta-lactamase; beta-lactamase 6669808..6671757 Pseudonocardia dioxanivorans CB1190 10368161 YP_004336258.1 CDS Psed_6307 NC_015312.1 6671788 6672204 D KEGG: sna:Snas_0649 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 6671788..6672204 Pseudonocardia dioxanivorans CB1190 10368162 YP_004336259.1 CDS Psed_6308 NC_015312.1 6672122 6672619 D KEGG: hau:Haur_1072 activator of HSP90 ATPase 1 family protein; manually curated; PFAM: Activator of Hsp90 ATPase homologue 1-like; Activator of Hsp90 ATPase 1 family protein 6672122..6672619 Pseudonocardia dioxanivorans CB1190 10368163 YP_004336260.1 CDS Psed_6309 NC_015312.1 6672632 6673543 R KEGG: gob:Gobs_2516 hypothetical protein; hypothetical protein complement(6672632..6673543) Pseudonocardia dioxanivorans CB1190 10368164 YP_004336261.1 CDS Psed_6310 NC_015312.1 6673719 6674309 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: sro:Sros_0098 transcriptional regulator, PadR family; PadR family transcriptional regulator 6673719..6674309 Pseudonocardia dioxanivorans CB1190 10368165 YP_004336262.1 CDS Psed_6311 NC_015312.1 6674450 6674890 D KEGG: sna:Snas_4756 hypothetical protein; hypothetical protein 6674450..6674890 Pseudonocardia dioxanivorans CB1190 10368166 YP_004336263.1 CDS Psed_6312 NC_015312.1 6675177 6675614 R hypothetical protein complement(6675177..6675614) Pseudonocardia dioxanivorans CB1190 10368167 YP_004336264.1 CDS Psed_6313 NC_015312.1 6675664 6676707 R PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: ach:Achl_0672 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(6675664..6676707) Pseudonocardia dioxanivorans CB1190 10368168 YP_004336265.1 CDS Psed_6314 NC_015312.1 6676753 6677631 R hypothetical protein complement(6676753..6677631) Pseudonocardia dioxanivorans CB1190 10368169 YP_004336266.1 CDS Psed_6315 NC_015312.1 6677800 6678279 R PFAM: Peroxiredoxin, OsmC-like protein; KEGG: afw:Anae109_2054 OsmC family protein; OsmC family protein complement(6677800..6678279) Pseudonocardia dioxanivorans CB1190 10368170 YP_004336267.1 CDS Psed_6316 NC_015312.1 6678398 6679465 R KEGG: nml:Namu_2396 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Alpha/beta hydrolase fold-1; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6678398..6679465) Pseudonocardia dioxanivorans CB1190 10368171 YP_004336268.1 CDS Psed_6317 NC_015312.1 6679540 6681099 D PFAM: Amidohydrolase 2; KEGG: mlo:mlr9221 hypothetical protein; amidohydrolase 6679540..6681099 Pseudonocardia dioxanivorans CB1190 10368172 YP_004336269.1 CDS Psed_6318 NC_015312.1 6681096 6682196 D PFAM: Amidohydrolase 2; KEGG: mlo:mlr9222 hypothetical protein; amidohydrolase 6681096..6682196 Pseudonocardia dioxanivorans CB1190 10368173 YP_004336270.1 CDS Psed_6319 NC_015312.1 6682193 6682630 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll7609 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 6682193..6682630 Pseudonocardia dioxanivorans CB1190 10368174 YP_004336271.1 CDS Psed_6320 NC_015312.1 6682642 6683106 D manually curated; PFAM: HTH transcriptional regulator, AraC; KEGG: tpr:Tpau_2986 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6682642..6683106 Pseudonocardia dioxanivorans CB1190 10368175 YP_004336272.1 CDS Psed_6321 NC_015312.1 6683117 6683545 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro02414 lyase; glyoxalase/bleomycin resistance protein/dioxygenase 6683117..6683545 Pseudonocardia dioxanivorans CB1190 10368176 YP_004336273.1 CDS Psed_6322 NC_015312.1 6683716 6684234 D PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: mav:MAV_5159 methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 6683716..6684234 Pseudonocardia dioxanivorans CB1190 10368177 YP_004336274.1 CDS Psed_6323 NC_015312.1 6684289 6685380 R KEGG: rha:RHA1_ro05161 hypothetical protein; hypothetical protein complement(6684289..6685380) Pseudonocardia dioxanivorans CB1190 10368178 YP_004336275.1 CDS Psed_6324 NC_015312.1 6685469 6686155 R KEGG: nml:Namu_0818 hypothetical protein; hypothetical protein complement(6685469..6686155) Pseudonocardia dioxanivorans CB1190 10368179 YP_004336276.1 CDS Psed_6325 NC_015312.1 6686212 6689301 D KEGG: nca:Noca_4962 transcriptional activator domain-containing protein; PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-4; SMART: Signal transduction response regulator, C-terminal; winged helix family transcriptional regulator 6686212..6689301 Pseudonocardia dioxanivorans CB1190 10368180 YP_004336277.1 CDS Psed_6326 NC_015312.1 6689373 6690107 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI_2727 hypothetical protein; short-chain dehydrogenase/reductase SDR 6689373..6690107 Pseudonocardia dioxanivorans CB1190 10368181 YP_004336278.1 CDS Psed_6327 NC_015312.1 6690139 6691038 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: amd:AMED_4619 LysR family transcriptional regulator; LysR family transcriptional regulator complement(6690139..6691038) Pseudonocardia dioxanivorans CB1190 10368182 YP_004336279.1 CDS Psed_6328 NC_015312.1 6691094 6692257 R KEGG: mrd:Mrad2831_3061 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; malate dehydrogenase complement(6691094..6692257) Pseudonocardia dioxanivorans CB1190 10368183 YP_004336280.1 CDS Psed_6329 NC_015312.1 6692377 6693774 D KEGG: fri:FraEuI1c_2507 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain; SMART: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain; histidine kinase 6692377..6693774 Pseudonocardia dioxanivorans CB1190 10368184 YP_004336281.1 CDS Psed_6330 NC_015312.1 6694345 6696495 D KEGG: gob:Gobs_2550 helicase domain-containing protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; helicase 6694345..6696495 Pseudonocardia dioxanivorans CB1190 10368185 YP_004336282.1 CDS Psed_6331 NC_015312.1 6696521 6697816 R PFAM: Short-chain dehydrogenase/reductase SDR; Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; KEGG: mes:Meso_2493 short-chain dehydrogenase/reductase SDR; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6696521..6697816) Pseudonocardia dioxanivorans CB1190 10368186 YP_004336283.1 CDS Psed_6332 NC_015312.1 6698386 6699255 R KEGG: cai:Caci_4599 luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup; F420-dependent oxidoreductase complement(6698386..6699255) Pseudonocardia dioxanivorans CB1190 10368187 YP_004336284.1 CDS Psed_6333 NC_015312.1 6699397 6700296 D PFAM: Crotonase, core; KEGG: cwo:Cwoe_2706 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase 6699397..6700296 Pseudonocardia dioxanivorans CB1190 10368188 YP_004336285.1 CDS Psed_6334 NC_015312.1 6700293 6700931 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_0501 transcriptional regulator, TetR family; TetR family transcriptional regulator 6700293..6700931 Pseudonocardia dioxanivorans CB1190 10368189 YP_004336286.1 CDS Psed_6335 NC_015312.1 6700964 6701992 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: msm:MSMEG_5845 C4-dicarboxylate transporter; C4-dicarboxylate transporter/malic acid transport protein complement(6700964..6701992) Pseudonocardia dioxanivorans CB1190 10368190 YP_004336287.1 CDS Psed_6336 NC_015312.1 6702161 6704476 R KEGG: nfa:nfa21950 hydantoinase; PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase complement(6702161..6704476) Pseudonocardia dioxanivorans CB1190 10368191 YP_004336288.1 CDS Psed_6337 NC_015312.1 6704478 6706598 R KEGG: rha:RHA1_ro00479 hydantoin utilization protein A; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase complement(6704478..6706598) Pseudonocardia dioxanivorans CB1190 10368192 YP_004336289.1 CDS Psed_6338 NC_015312.1 6706767 6708302 D PFAM: Monooxygenase, FAD-binding; KEGG: nfa:nfa21970 oxidoreductase; monooxygenase FAD-binding protein 6706767..6708302 Pseudonocardia dioxanivorans CB1190 10368193 YP_004336290.1 CDS Psed_6339 NC_015312.1 6708299 6709945 D KEGG: nfa:nfa21960 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; (2,3-dihydroxybenzoyl)adenylate synthase 6708299..6709945 Pseudonocardia dioxanivorans CB1190 10368194 YP_004336291.1 CDS Psed_6340 NC_015312.1 6709942 6710664 D PFAM: Asp/Glu/hydantoin racemase; KEGG: rop:ROP_34370 maleate cis-trans isomerase; Asp/Glu/hydantoin racemase 6709942..6710664 Pseudonocardia dioxanivorans CB1190 10368195 YP_004336292.1 CDS Psed_6341 NC_015312.1 6710714 6711358 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rop:ROP_34380 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 6710714..6711358 Pseudonocardia dioxanivorans CB1190 10368196 YP_004336293.1 CDS Psed_6342 NC_015312.1 6711325 6711603 D KEGG: rop:ROP_34390 hypothetical protein; hypothetical protein 6711325..6711603 Pseudonocardia dioxanivorans CB1190 10368197 YP_004336294.1 CDS Psed_6343 NC_015312.1 6711600 6712877 D KEGG: nfa:nfa21900 hypothetical protein; hypothetical protein 6711600..6712877 Pseudonocardia dioxanivorans CB1190 10368198 YP_004336295.1 CDS Psed_6344 NC_015312.1 6712953 6714263 R PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein; integrase catalytic subunit complement(6712953..6714263) Pseudonocardia dioxanivorans CB1190 10368199 YP_004336296.1 CDS Psed_6345 NC_015312.1 6714369 6715568 R PFAM: Homogentisate 1,2-dioxygenase; KEGG: sen:SACE_3944 homogentisate 1,2-dioxygenase; homogentisate 12-dioxygenase complement(6714369..6715568) Pseudonocardia dioxanivorans CB1190 10368200 YP_004336297.1 CDS Psed_6346 NC_015312.1 6715742 6716422 D KEGG: rer:RER_57680 hypothetical protein; hypothetical protein 6715742..6716422 Pseudonocardia dioxanivorans CB1190 10368201 YP_004336298.1 CDS Psed_6347 NC_015312.1 6716721 6717158 D PFAM: Heat shock protein Hsp20; KEGG: amd:AMED_3057 heat shock protein; heat shock protein Hsp20 6716721..6717158 Pseudonocardia dioxanivorans CB1190 10368202 YP_004336299.1 CDS Psed_6348 NC_015312.1 6717167 6717988 D KEGG: cfa:608199 hypothetical protein LOC608199; hypothetical protein 6717167..6717988 Pseudonocardia dioxanivorans CB1190 10368203 YP_004336300.1 CDS Psed_6349 NC_015312.1 6717973 6718620 R KEGG: gob:Gobs_2541 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; LuxR family transcriptional regulator complement(6717973..6718620) Pseudonocardia dioxanivorans CB1190 10368204 YP_004336301.1 CDS Psed_6350 NC_015312.1 6718608 6719492 R KEGG: gob:Gobs_2540 signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; histidine kinase complement(6718608..6719492) Pseudonocardia dioxanivorans CB1190 10368205 YP_004336302.1 CDS Psed_6351 NC_015312.1 6719659 6720468 D PFAM: Transposase, IS4-like; KEGG: gob:Gobs_1406 hypothetical protein; transposase IS4 family protein 6719659..6720468 Pseudonocardia dioxanivorans CB1190 10368206 YP_004336303.1 CDS Psed_6352 NC_015312.1 6720516 6721109 R PFAM: Plasmid pRiA4b ORF-3-like; KEGG: mil:ML5_1921 plasmid pria4b orf-3 family protein; plasmid pRiA4b ORF-3 family protein complement(6720516..6721109) Pseudonocardia dioxanivorans CB1190 10368207 YP_004336304.1 CDS Psed_6353 NC_015312.1 6721226 6722455 D KEGG: gob:Gobs_3530 transposase; transposase 6721226..6722455 Pseudonocardia dioxanivorans CB1190 10368208 YP_004336305.1 CDS Psed_6354 NC_015312.1 6722706 6723749 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: amd:AMED_1482 transposase; transposase IS116/IS110/IS902 family protein complement(6722706..6723749) Pseudonocardia dioxanivorans CB1190 10368209 YP_004336306.1 CDS Psed_6357 NC_015312.1 6724595 6725413 R KEGG: tbi:Tbis_3219 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; hydrogenase nickel incorporation protein HypB complement(6724595..6725413) Pseudonocardia dioxanivorans CB1190 10368212 YP_004336307.1 CDS Psed_6358 NC_015312.1 6725420 6725758 R PFAM: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: tbi:Tbis_3220 hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA complement(6725420..6725758) Pseudonocardia dioxanivorans CB1190 10368213 YP_004336308.1 CDS Psed_6359 NC_015312.1 6725802 6726860 R KEGG: tbi:Tbis_3221 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(6725802..6726860) Pseudonocardia dioxanivorans CB1190 10368214 YP_004336309.1 CDS Psed_6360 NC_015312.1 6727073 6727600 D PFAM: Protein of unknown function DUF1641; KEGG: tbi:Tbis_3222 hypothetical protein; hypothetical protein 6727073..6727600 Pseudonocardia dioxanivorans CB1190 10368215 YP_004336310.1 CDS Psed_6361 NC_015312.1 6727735 6728706 D KEGG: tbi:Tbis_3223 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; cytochrome-c3 hydrogenase 6727735..6728706 Pseudonocardia dioxanivorans CB1190 10368216 YP_004336311.1 CDS Psed_6362 NC_015312.1 6728776 6730383 D KEGG: tbi:Tbis_3224 cytochrome-c3 hydrogenase; PFAM: Nickel-dependent hydrogenase, large subunit; cytochrome-c3 hydrogenase 6728776..6730383 Pseudonocardia dioxanivorans CB1190 10368217 YP_004336312.1 CDS Psed_6363 NC_015312.1 6730380 6731219 D KEGG: mva:Mvan_2367 hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein; hydrogenase maturation protease 6730380..6731219 Pseudonocardia dioxanivorans CB1190 10368218 YP_004336313.1 CDS Psed_6364 NC_015312.1 6731216 6731545 D KEGG: msm:MSMEG_2266 hypothetical protein; hypothetical protein 6731216..6731545 Pseudonocardia dioxanivorans CB1190 10368219 YP_004336314.1 CDS Psed_6365 NC_015312.1 6731556 6732815 D KEGG: msm:MSMEG_2267 TPR repeat-containing protein; hypothetical protein 6731556..6732815 Pseudonocardia dioxanivorans CB1190 10368220 YP_004336315.1 CDS Psed_6366 NC_015312.1 6732819 6733172 D KEGG: chl:Chy400_2991 hypothetical protein; hypothetical protein 6732819..6733172 Pseudonocardia dioxanivorans CB1190 10368221 YP_004336316.1 CDS Psed_6367 NC_015312.1 6733183 6734103 D PFAM: NIF system FeS cluster assembly, NifU, C-terminal; Rieske [2Fe-2S] iron-sulphur domain; KEGG: msm:MSMEG_2268 hypothetical protein; nitrogen-fixing NifU domain-containing protein 6733183..6734103 Pseudonocardia dioxanivorans CB1190 10368222 YP_004336317.1 CDS Psed_6368 NC_015312.1 6734100 6735302 D PFAM: NHL repeat; KEGG: mva:Mvan_2370 NHL repeat-containing protein; NHL repeat containing protein 6734100..6735302 Pseudonocardia dioxanivorans CB1190 10368223 YP_004336318.1 CDS Psed_6369 NC_015312.1 6735299 6737638 D KEGG: tbi:Tbis_3230 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Carbamoyltransferase, HypF-type; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type; (NiFe) hydrogenase maturation protein HypF 6735299..6737638 Pseudonocardia dioxanivorans CB1190 10368224 YP_004336319.1 CDS Psed_6370 NC_015312.1 6737640 6737900 D KEGG: tbi:Tbis_3231 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone HypC/HupF 6737640..6737900 Pseudonocardia dioxanivorans CB1190 10368225 YP_004336320.1 CDS Psed_6371 NC_015312.1 6737897 6738622 D PFAM: Hydrogenase expression/formation protein, HupF/HypC; KEGG: tbi:Tbis_3232 hypothetical protein; hydrogenase expression/formation protein HupF/HypC 6737897..6738622 Pseudonocardia dioxanivorans CB1190 10368226 YP_004336321.1 CDS Psed_6372 NC_015312.1 6738622 6739296 D KEGG: mmi:MMAR_1860 sugar phosphate isomerase; sugar phosphate isomerase 6738622..6739296 Pseudonocardia dioxanivorans CB1190 10368227 YP_004336322.1 CDS Psed_6373 NC_015312.1 6739293 6740402 D KEGG: mmi:MMAR_1859 hydrogenase maturation factor, HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; hydrogenase expression/formation protein HypE 6739293..6740402 Pseudonocardia dioxanivorans CB1190 10368228 YP_004336323.1 CDS Psed_6374 NC_015312.1 6740414 6740686 D KEGG: mmi:MMAR_1858 hydrogenase maturation factor, HypC; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone HypC/HupF 6740414..6740686 Pseudonocardia dioxanivorans CB1190 10368229 YP_004336324.1 CDS Psed_6375 NC_015312.1 6740724 6741854 D KEGG: tbi:Tbis_3236 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 6740724..6741854 Pseudonocardia dioxanivorans CB1190 10368230 YP_004336325.1 CDS Psed_6376 NC_015312.1 6741851 6742597 D KEGG: tbi:Tbis_3237 hypothetical protein; hypothetical protein 6741851..6742597 Pseudonocardia dioxanivorans CB1190 10368231 YP_004336326.1 CDS Psed_6377 NC_015312.1 6742597 6743460 D KEGG: msm:MSMEG_2270 hypothetical protein; hypothetical protein 6742597..6743460 Pseudonocardia dioxanivorans CB1190 10368232 YP_004336327.1 CDS Psed_6378 NC_015312.1 6743876 6743989 D hypothetical protein 6743876..6743989 Pseudonocardia dioxanivorans CB1190 10368233 YP_004336328.1 CDS Psed_6379 NC_015312.1 6744365 6745225 R KEGG: rha:RHA1_ro11310 hydroxyquinol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal; hydroxyquinol 1,2-dioxygenase complement(6744365..6745225) Pseudonocardia dioxanivorans CB1190 10368234 YP_004336329.1 CDS Psed_6380 NC_015312.1 6745238 6745537 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rha:RHA1_ro11311 hypothetical protein; antibiotic biosynthesis monooxygenase complement(6745238..6745537) Pseudonocardia dioxanivorans CB1190 10368235 YP_004336330.1 CDS Psed_6381 NC_015312.1 6745752 6746561 D PFAM: Transposase, IS4-like; KEGG: gob:Gobs_1406 hypothetical protein; transposase IS4 family protein 6745752..6746561 Pseudonocardia dioxanivorans CB1190 10368236 YP_004336331.1 CDS Psed_6382 NC_015312.1 6746609 6747202 R PFAM: Plasmid pRiA4b ORF-3-like; KEGG: mil:ML5_1921 plasmid pria4b orf-3 family protein; plasmid pRiA4b ORF-3 family protein complement(6746609..6747202) Pseudonocardia dioxanivorans CB1190 10368237 YP_004336332.1 CDS Psed_6383 NC_015312.1 6747325 6748218 D PFAM: Transposase, IS4-like; KEGG: sen:SACE_4676 IS402-like transposase; transposase IS4 family protein 6747325..6748218 Pseudonocardia dioxanivorans CB1190 10368238 YP_004336333.1 CDS Psed_6384 NC_015312.1 6748231 6749070 R KEGG: gob:Gobs_2540 signal transduction histidine kinase; signal transduction histidine kinase complement(6748231..6749070) Pseudonocardia dioxanivorans CB1190 10368239 YP_004336334.1 CDS Psed_6385 NC_015312.1 6749268 6750554 D PFAM: Peptidase M23; KEGG: xau:Xaut_4198 peptidase M23B; peptidase M23 6749268..6750554 Pseudonocardia dioxanivorans CB1190 10368240 YP_004336335.1 CDS Psed_6386 NC_015312.1 6750840 6753719 R hypothetical protein complement(6750840..6753719) Pseudonocardia dioxanivorans CB1190 10368241 YP_004336336.1 CDS Psed_6387 NC_015312.1 6753908 6754255 D hypothetical protein 6753908..6754255 Pseudonocardia dioxanivorans CB1190 10368242 YP_004336337.1 CDS Psed_6388 NC_015312.1 6754252 6754446 D hypothetical protein 6754252..6754446 Pseudonocardia dioxanivorans CB1190 10368243 YP_004336338.1 CDS Psed_6389 NC_015312.1 6754509 6754844 D KEGG: fri:FraEuI1c_4593 transcriptional regulator, SARP family; SARP family transcriptional regulator 6754509..6754844 Pseudonocardia dioxanivorans CB1190 10368244 YP_004336339.1 CDS Psed_6390 NC_015312.1 6755032 6756402 D hypothetical protein 6755032..6756402 Pseudonocardia dioxanivorans CB1190 10368245 YP_004336340.1 CDS Psed_6391 NC_015312.1 6756600 6756767 D hypothetical protein 6756600..6756767 Pseudonocardia dioxanivorans CB1190 10368246 YP_004336341.1 CDS Psed_6392 NC_015312.1 6756903 6757802 D PFAM: Alpha/beta hydrolase fold-1; KEGG: nml:Namu_0557 alpha/beta hydrolase fold protein; alpha/beta hydrolase 6756903..6757802 Pseudonocardia dioxanivorans CB1190 10368247 YP_004336342.1 CDS Psed_6393 NC_015312.1 6757807 6758424 R hypothetical protein complement(6757807..6758424) Pseudonocardia dioxanivorans CB1190 10368248 YP_004336343.1 CDS Psed_6394 NC_015312.1 6758421 6759662 R KEGG: nml:Namu_5075 hypothetical protein; hypothetical protein complement(6758421..6759662) Pseudonocardia dioxanivorans CB1190 10368249 YP_004336344.1 CDS Psed_6396 NC_015312.1 6760301 6761074 R PFAM: Amidase; KEGG: rhi:NGR_b05700 indoleacetamide hydrolase; amidase complement(6760301..6761074) Pseudonocardia dioxanivorans CB1190 10368251 YP_004336345.1 CDS Psed_6397 NC_015312.1 6761201 6761824 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_2153 transcriptional regulator, TetR family protein; TetR family transcriptional regulator 6761201..6761824 Pseudonocardia dioxanivorans CB1190 10368252 YP_004336346.1 CDS Psed_6398 NC_015312.1 6761841 6762431 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: art:Arth_0865 TetR family transcriptional regulator; TetR family transcriptional regulator complement(6761841..6762431) Pseudonocardia dioxanivorans CB1190 10368253 YP_004336347.1 CDS Psed_6399 NC_015312.1 6762546 6763295 R KEGG: cai:Caci_7157 hypothetical protein; hypothetical protein complement(6762546..6763295) Pseudonocardia dioxanivorans CB1190 10368254 YP_004336348.1 CDS Psed_6400 NC_015312.1 6763321 6764184 R PFAM: ABC transporter-like; KEGG: kfl:Kfla_0628 ABC transporter related protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase complement(6763321..6764184) Pseudonocardia dioxanivorans CB1190 10368255 YP_004336349.1 CDS Psed_6401 NC_015312.1 6764181 6767300 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: gob:Gobs_3888 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(6764181..6767300) Pseudonocardia dioxanivorans CB1190 10368256 YP_004336350.1 CDS Psed_6402 NC_015312.1 6767297 6768340 R PFAM: FAD dependent oxidoreductase; KEGG: gob:Gobs_3895 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase complement(6767297..6768340) Pseudonocardia dioxanivorans CB1190 10368257 YP_004336351.1 CDS Psed_6403 NC_015312.1 6768337 6768546 R PFAM: Heavy metal transport/detoxification protein; KEGG: mil:ML5_0770 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein complement(6768337..6768546) Pseudonocardia dioxanivorans CB1190 10368258 YP_004336352.1 CDS Psed_6404 NC_015312.1 6768630 6771302 D KEGG: gob:Gobs_3893 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 6768630..6771302 Pseudonocardia dioxanivorans CB1190 10368259 YP_004336353.1 CDS Psed_6406 NC_015312.1 6773945 6774496 R KEGG: fri:FraEuI1c_1573 hypothetical protein; hypothetical protein complement(6773945..6774496) Pseudonocardia dioxanivorans CB1190 10368261 YP_004336354.1 CDS Psed_6407 NC_015312.1 6774527 6775138 R KEGG: req:REQ_03350 sam dependent methyltransferase; hypothetical protein complement(6774527..6775138) Pseudonocardia dioxanivorans CB1190 10368262 YP_004336355.1 CDS Psed_6408 NC_015312.1 6775475 6775750 D KEGG: mva:Mvan_1930 hypothetical protein; hypothetical protein 6775475..6775750 Pseudonocardia dioxanivorans CB1190 10368263 YP_004336356.1 CDS Psed_6409 NC_015312.1 6775831 6776781 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sro:Sros_4758 hypothetical protein; hypothetical protein complement(6775831..6776781) Pseudonocardia dioxanivorans CB1190 10368264 YP_004336357.1 CDS Psed_6410 NC_015312.1 6776778 6777437 R PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: cwo:Cwoe_1418 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin complement(6776778..6777437) Pseudonocardia dioxanivorans CB1190 10368265 YP_004336358.1 CDS Psed_6411 NC_015312.1 6777527 6778258 D KEGG: sgr:SGR_274 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator 6777527..6778258 Pseudonocardia dioxanivorans CB1190 10368266 YP_004336359.1 CDS Psed_6412 NC_015312.1 6778270 6779364 D KEGG: cwo:Cwoe_1411 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; histidine kinase 6778270..6779364 Pseudonocardia dioxanivorans CB1190 10368267 YP_004336360.1 CDS Psed_6413 NC_015312.1 6779471 6780034 R PFAM: Uncharacterised protein family YphA; KEGG: rha:RHA1_ro10353 hypothetical protein; DoxX family protein complement(6779471..6780034) Pseudonocardia dioxanivorans CB1190 10368268 YP_004336361.1 CDS Psed_6414 NC_015312.1 6780221 6781513 R PFAM: Chloride channel, voltage gated; KEGG: amr:AM1_2979 Cl-channel, voltage gated; Cl- channel voltage-gated family protein complement(6780221..6781513) Pseudonocardia dioxanivorans CB1190 10368269 YP_004336362.1 CDS Psed_6415 NC_015312.1 6781767 6783200 D PFAM: Cytochrome d ubiquinol oxidase, subunit I; KEGG: sro:Sros_7914 cytochrome d ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 6781767..6783200 Pseudonocardia dioxanivorans CB1190 10368270 YP_004336363.1 CDS Psed_6416 NC_015312.1 6783197 6784273 D PFAM: Cytochrome d ubiquinol oxidase, subunit II; KEGG: sro:Sros_7913 terminal oxidase subunit II; cytochrome bd ubiquinol oxidase subunit II 6783197..6784273 Pseudonocardia dioxanivorans CB1190 10368271 YP_004336364.1 CDS Psed_6417 NC_015312.1 6784290 6786152 D PFAM: Glycoside hydrolase 15-related; KEGG: cwo:Cwoe_0874 glycoside hydrolase 15-related protein; glycoside hydrolase 15-like protein 6784290..6786152 Pseudonocardia dioxanivorans CB1190 10368272 YP_004336365.1 CDS Psed_6418 NC_015312.1 6786149 6787501 D KEGG: nml:Namu_1841 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase 6786149..6787501 Pseudonocardia dioxanivorans CB1190 10368273 YP_004336366.1 CDS Psed_6420 NC_015312.1 6787789 6789177 D TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: npu:Npun_F3304 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; glucose-6-phosphate 1-dehydrogenase 6787789..6789177 Pseudonocardia dioxanivorans CB1190 10368275 YP_004336367.1 CDS Psed_6421 NC_015312.1 6789253 6789708 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fri:FraEuI1c_3368 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(6789253..6789708) Pseudonocardia dioxanivorans CB1190 10368276 YP_004336368.1 CDS Psed_6422 NC_015312.1 6789798 6790484 R PFAM: Methyltransferase type 12; KEGG: rxy:Rxyl_0824 type 12 methyltransferase; type 12 methyltransferase complement(6789798..6790484) Pseudonocardia dioxanivorans CB1190 10368277 YP_004336369.1 CDS Psed_6424 NC_015312.1 6791049 6791252 D KEGG: fre:Franean1_0560 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 6791049..6791252 Pseudonocardia dioxanivorans CB1190 10368279 YP_004336370.1 CDS Psed_6425 NC_015312.1 6791439 6791870 R hypothetical protein complement(6791439..6791870) Pseudonocardia dioxanivorans CB1190 10368280 YP_004336371.1 CDS Psed_6426 NC_015312.1 6791990 6793999 D PFAM: Copper amine oxidase, C-terminal; Copper amine oxidase, N3-terminal; Copper amine oxidase, N2-terminal; KEGG: fre:Franean1_7247 tyramine oxidase; Copper amine oxidase domain-containing protein 6791990..6793999 Pseudonocardia dioxanivorans CB1190 10368281 YP_004336372.1 CDS Psed_6427 NC_015312.1 6793996 6795498 D PFAM: Amino acid permease domain; KEGG: msm:MSMEG_1137 amino acid permease-associated region; amino acid permease 6793996..6795498 Pseudonocardia dioxanivorans CB1190 10368282 YP_004336373.1 CDS Psed_6429 NC_015312.1 6796601 6797155 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ank:AnaeK_1572 regulatory protein TetR; TetR family transcriptional regulator 6796601..6797155 Pseudonocardia dioxanivorans CB1190 10368284 YP_004336374.1 CDS Psed_6430 NC_015312.1 6797295 6800372 D KEGG: lch:Lcho_4113 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; multi-sensor hybrid histidine kinase 6797295..6800372 Pseudonocardia dioxanivorans CB1190 10368285 YP_004336375.1 CDS Psed_6431 NC_015312.1 6800369 6801091 D KEGG: cyn:Cyan7425_0749 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; sensor with HAMP domain-containing protein 6800369..6801091 Pseudonocardia dioxanivorans CB1190 10368286 YP_004336376.1 CDS Psed_6432 NC_015312.1 6801088 6801840 D KEGG: hau:Haur_1254 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 6801088..6801840 Pseudonocardia dioxanivorans CB1190 10368287 YP_004336377.1 CDS Psed_6433 NC_015312.1 6801842 6803746 D PFAM: Patatin/Phospholipase A2-related; Cyclic nucleotide-binding domain; KEGG: dal:Dalk_2094 cyclic nucleotide-binding protein; SMART: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 6801842..6803746 Pseudonocardia dioxanivorans CB1190 10368288 YP_004336378.1 CDS Psed_6434 NC_015312.1 6803781 6804449 R KEGG: kva:Kvar_3050 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver complement(6803781..6804449) Pseudonocardia dioxanivorans CB1190 10368289 YP_004336379.1 CDS Psed_6435 NC_015312.1 6804815 6806215 R KEGG: amd:AMED_2409 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; (R)-6-hydroxynicotine oxidase complement(6804815..6806215) Pseudonocardia dioxanivorans CB1190 10368290 YP_004336380.1 CDS Psed_6436 NC_015312.1 6806282 6809242 R PFAM: Bacterial transcriptional activator domain; KEGG: pol:Bpro_1406 transcriptional activator domain-containing protein; transcriptional activator domain-containing protein complement(6806282..6809242) Pseudonocardia dioxanivorans CB1190 10368291 YP_004336381.1 CDS Psed_6437 NC_015312.1 6809408 6810517 R KEGG: nml:Namu_0956 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6809408..6810517) Pseudonocardia dioxanivorans CB1190 10368292 YP_004336382.1 CDS Psed_6438 NC_015312.1 6810538 6811377 D PFAM: Haemerythrin/HHE cation-binding motif; KEGG: nml:Namu_0955 hemerythrin HHE cation binding domain-containing protein; hemerythrin HHE cation binding domain-containing protein 6810538..6811377 Pseudonocardia dioxanivorans CB1190 10368293 YP_004336383.1 CDS Psed_6439 NC_015312.1 6811457 6812524 D PFAM: Alpha/beta hydrolase fold-1; KEGG: msm:MSMEG_1587 alpha/beta hydrolase fold; alpha/beta hydrolase 6811457..6812524 Pseudonocardia dioxanivorans CB1190 10368294 YP_004336384.1 CDS Psed_6440 NC_015312.1 6812910 6814049 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: nar:Saro_2409 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 6812910..6814049 Pseudonocardia dioxanivorans CB1190 10368295 YP_004336385.1 CDS Psed_6441 NC_015312.1 6814278 6815480 R PFAM: Beta-lactamase-related; KEGG: dsh:Dshi_2284 hypothetical protein; beta-lactamase complement(6814278..6815480) Pseudonocardia dioxanivorans CB1190 10368296 YP_004336386.1 CDS Psed_6442 NC_015312.1 6815783 6816799 R KEGG: nml:Namu_1675 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(6815783..6816799) Pseudonocardia dioxanivorans CB1190 10368297 YP_004336387.1 CDS Psed_6443 NC_015312.1 6817130 6818467 R PFAM: Major facilitator superfamily MFS-1; KEGG: rop:ROP_17540 MFS transporter; major facilitator superfamily protein complement(6817130..6818467) Pseudonocardia dioxanivorans CB1190 10368298 YP_004336388.1 CDS Psed_6444 NC_015312.1 6818460 6818552 R hypothetical protein complement(6818460..6818552) Pseudonocardia dioxanivorans CB1190 10368299 YP_004336389.1 CDS Psed_6445 NC_015312.1 6818540 6819733 R PFAM: Cytochrome P450; KEGG: swi:Swit_1021 cytochrome P450; cytochrome P450 complement(6818540..6819733) Pseudonocardia dioxanivorans CB1190 10368300 YP_004336390.1 CDS Psed_6446 NC_015312.1 6819852 6820703 R PFAM: Alpha/beta hydrolase fold-1; KEGG: fri:FraEuI1c_5691 hypothetical protein; alpha/beta hydrolase complement(6819852..6820703) Pseudonocardia dioxanivorans CB1190 10368301 YP_004336391.1 CDS Psed_6447 NC_015312.1 6820799 6821809 R KEGG: nfa:nfa12460 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator complement(6820799..6821809) Pseudonocardia dioxanivorans CB1190 10368302 YP_004336392.1 CDS Psed_6448 NC_015312.1 6821861 6823522 R KEGG: nfa:nfa21960 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; (2,3-dihydroxybenzoyl)adenylate synthase complement(6821861..6823522) Pseudonocardia dioxanivorans CB1190 10368303 YP_004336393.1 CDS Psed_6449 NC_015312.1 6823546 6824688 R PFAM: Monooxygenase, FAD-binding; KEGG: reu:Reut_B5482 monooxygenase, FAD-binding; monooxygenase FAD-binding protein complement(6823546..6824688) Pseudonocardia dioxanivorans CB1190 10368304 YP_004336394.1 CDS Psed_6450 NC_015312.1 6824667 6825239 R PFAM: Flavodoxin/nitric oxide synthase; KEGG: mag:amb4017 multimeric flavodoxin WrbA; flavodoxin/nitric oxide synthase complement(6824667..6825239) Pseudonocardia dioxanivorans CB1190 10368305 YP_004336395.1 CDS Psed_6451 NC_015312.1 6825245 6826507 R KEGG: nfa:nfa21900 hypothetical protein; hypothetical protein complement(6825245..6826507) Pseudonocardia dioxanivorans CB1190 10368306 YP_004336396.1 CDS Psed_6452 NC_015312.1 6826504 6826761 R KEGG: nfa:nfa21910 hypothetical protein; hypothetical protein complement(6826504..6826761) Pseudonocardia dioxanivorans CB1190 10368307 YP_004336397.1 CDS Psed_6453 NC_015312.1 6826758 6827360 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa21920 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(6826758..6827360) Pseudonocardia dioxanivorans CB1190 10368308 YP_004336398.1 CDS Psed_6454 NC_015312.1 6827449 6828225 R PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_34320 TetR family transcriptional regulator; TetR family transcriptional regulator complement(6827449..6828225) Pseudonocardia dioxanivorans CB1190 10368309 YP_004336399.1 CDS Psed_6455 NC_015312.1 6828395 6829096 R KEGG: cse:Cseg_1400 hypothetical protein; hypothetical protein complement(6828395..6829096) Pseudonocardia dioxanivorans CB1190 10368310 YP_004336400.1 CDS Psed_6456 NC_015312.1 6829272 6829586 R hypothetical protein complement(6829272..6829586) Pseudonocardia dioxanivorans CB1190 10368311 YP_004336401.1 CDS Psed_6457 NC_015312.1 6829839 6830576 R KEGG: bpt:Bpet1649 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR family transcriptional regulator complement(6829839..6830576) Pseudonocardia dioxanivorans CB1190 10368312 YP_004336402.1 CDS Psed_6458 NC_015312.1 6830783 6832159 D KEGG: sco:SCO1204 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase (NAD(P)(+)) 6830783..6832159 Pseudonocardia dioxanivorans CB1190 10368313 YP_004336403.1 CDS Psed_6459 NC_015312.1 6832193 6833608 D PFAM: Major facilitator superfamily MFS-1; KEGG: dsy:DSY3923 hypothetical protein; major facilitator superfamily protein 6832193..6833608 Pseudonocardia dioxanivorans CB1190 10368314 YP_004336404.1 CDS Psed_6460 NC_015312.1 6833673 6834059 D PFAM: Carboxymuconolactone decarboxylase; KEGG: rec:RHECIAT_PC0000387 gamma-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 6833673..6834059 Pseudonocardia dioxanivorans CB1190 10368315 YP_004336405.1 CDS Psed_6461 NC_015312.1 6834056 6834958 D KEGG: mrd:Mrad2831_3250 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 6834056..6834958 Pseudonocardia dioxanivorans CB1190 10368316 YP_004336406.1 CDS Psed_6462 NC_015312.1 6834970 6835689 D PFAM: Crotonase, core; KEGG: pzu:PHZ_p0199 enoyl-CoA hydratase/isomerase protein; enoyl-CoA hydratase 6834970..6835689 Pseudonocardia dioxanivorans CB1190 10368317 YP_004336407.1 CDS Psed_6463 NC_015312.1 6835686 6836432 D KEGG: rer:RER_08290 hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 6835686..6836432 Pseudonocardia dioxanivorans CB1190 10368318 YP_004336408.1 CDS Psed_6464 NC_015312.1 6836425 6837363 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: dge:Dgeo_1081 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 6836425..6837363 Pseudonocardia dioxanivorans CB1190 10368319 YP_004336409.1 CDS Psed_6465 NC_015312.1 6837356 6838171 D PFAM: Alpha/beta hydrolase fold-1; KEGG: rso:RSc0298 B-ketoadipate enol-lactone hydrolase; alpha/beta hydrolase 6837356..6838171 Pseudonocardia dioxanivorans CB1190 10368320 YP_004336410.1 CDS Psed_6466 NC_015312.1 6838226 6839821 R KEGG: cwo:Cwoe_4118 transcriptional regulator, PucR family; PucR family transcriptional regulator complement(6838226..6839821) Pseudonocardia dioxanivorans CB1190 10368321 YP_004336411.1 CDS Psed_6467 NC_015312.1 6839941 6840933 D KEGG: cwo:Cwoe_4112 5,10-methylenetetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup; 5,10-methylenetetrahydromethanopterin reductase 6839941..6840933 Pseudonocardia dioxanivorans CB1190 10368322 YP_004336412.1 CDS Psed_6468 NC_015312.1 6840930 6842018 D PFAM: Protein of unknown function DUF917; KEGG: cwo:Cwoe_4117 protein of unknown function DUF917; hypothetical protein 6840930..6842018 Pseudonocardia dioxanivorans CB1190 10368323 YP_004336413.1 CDS Psed_6469 NC_015312.1 6842011 6843576 D PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: tbi:Tbis_2949 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 6842011..6843576 Pseudonocardia dioxanivorans CB1190 10368324 YP_004336414.1 CDS Psed_6470 NC_015312.1 6843684 6844535 D PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; KEGG: dka:DKAM_0739 molybdopterin dehydrogenase FAD-binding; molybdopterin dehydrogenase FAD-binding protein 6843684..6844535 Pseudonocardia dioxanivorans CB1190 10368325 YP_004336415.1 CDS Psed_6471 NC_015312.1 6844541 6845008 D KEGG: cai:Caci_4735 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; xanthine dehydrogenase 6844541..6845008 Pseudonocardia dioxanivorans CB1190 10368326 YP_004336416.1 CDS Psed_6472 NC_015312.1 6845005 6847326 D KEGG: cwo:Cwoe_4113 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; xanthine dehydrogenase 6845005..6847326 Pseudonocardia dioxanivorans CB1190 10368327 YP_004336417.1 CDS Psed_6473 NC_015312.1 6847323 6849743 D KEGG: cwo:Cwoe_4103 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; carbon-monoxide dehydrogenase 6847323..6849743 Pseudonocardia dioxanivorans CB1190 10368328 YP_004336418.1 CDS Psed_6474 NC_015312.1 6849740 6850615 D KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; carbon-monoxide dehydrogenase 6849740..6850615 Pseudonocardia dioxanivorans CB1190 10368329 YP_004336419.1 CDS Psed_6475 NC_015312.1 6850612 6851148 D KEGG: tro:trd_A0776 carbon monoxide dehydrogenase small chain (CO dehydrogenase subunit S) (CO-DH S); PFAM: [2Fe-2S]-binding; Ferredoxin; carbon-monoxide dehydrogenase 6850612..6851148 Pseudonocardia dioxanivorans CB1190 10368330 YP_004336420.1 CDS Psed_6476 NC_015312.1 6851245 6851757 R hypothetical protein complement(6851245..6851757) Pseudonocardia dioxanivorans CB1190 10368331 YP_004336421.1 CDS Psed_6477 NC_015312.1 6852057 6853559 D KEGG: ava:Ava_1387 BNR repeat-containing glycosyl hydrolase; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase; peptidase M10A and M12B matrixin and adamalysin 6852057..6853559 Pseudonocardia dioxanivorans CB1190 10368332 YP_004336422.1 CDS Psed_6479 NC_015312.1 6854126 6855301 R PFAM: Luciferase-like, subgroup; KEGG: svi:Svir_26120 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; luciferase-like protein complement(6854126..6855301) Pseudonocardia dioxanivorans CB1190 10368334 YP_004336423.1 CDS Psed_6480 NC_015312.1 6855343 6855780 R PFAM: Domain of unknown function DUF336; KEGG: mau:Micau_3758 hypothetical protein; hypothetical protein complement(6855343..6855780) Pseudonocardia dioxanivorans CB1190 10368335 YP_004336424.1 CDS Psed_6481 NC_015312.1 6855809 6856978 R KEGG: nar:Saro_1475 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(6855809..6856978) Pseudonocardia dioxanivorans CB1190 10368336 YP_004336425.1 CDS Psed_6482 NC_015312.1 6857204 6858226 D KEGG: svi:Svir_26160 DNA-binding domain-containing protein, AraC-type; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; AraC family transcriptional regulator 6857204..6858226 Pseudonocardia dioxanivorans CB1190 10368337 YP_004336426.1 CDS Psed_6483 NC_015312.1 6858594 6859799 R KEGG: sen:SACE_1570 hypothetical protein; hypothetical protein complement(6858594..6859799) Pseudonocardia dioxanivorans CB1190 10368338 YP_004336427.1 CDS Psed_6484 NC_015312.1 6859796 6860920 R KEGG: sma:SAV_7223 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02678; PFAM: Conserved hypothetical protein CHP02678; hypothetical protein complement(6859796..6860920) Pseudonocardia dioxanivorans CB1190 10368339 YP_004336428.1 CDS Psed_6485 NC_015312.1 6860913 6862397 R KEGG: sma:SAV_7222 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677; hypothetical protein complement(6860913..6862397) Pseudonocardia dioxanivorans CB1190 10368340 YP_004336429.1 CDS Psed_6486 NC_015312.1 6862394 6866461 R TIGRFAM: Conserved hypothetical protein CHP02680; KEGG: sma:SAV_7224 hypothetical protein; hypothetical protein complement(6862394..6866461) Pseudonocardia dioxanivorans CB1190 10368341 YP_004336430.1 CDS Psed_6487 NC_015312.1 6866689 6868395 D PFAM: ATPase, AAA-4; KEGG: xce:Xcel_3059 transcriptional regulator; transcriptional regulator 6866689..6868395 Pseudonocardia dioxanivorans CB1190 10368342 YP_004336431.1 CDS Psed_6488 NC_015312.1 6868660 6869076 R PFAM: Protein of unknown function DUF1486; KEGG: gvi:glr2060 hypothetical protein; hypothetical protein complement(6868660..6869076) Pseudonocardia dioxanivorans CB1190 10368344 YP_004336432.1 CDS Psed_6489 NC_015312.1 6869105 6870256 R KEGG: sen:SACE_0379 DNA polymerase III, delta' subunit; TIGRFAM: DNA polymerase III, delta prime subunit; SMART: ATPase, AAA+ type, core; DNA polymerase III subunit delta' complement(6869105..6870256) Pseudonocardia dioxanivorans CB1190 10368345 YP_004336433.1 CDS Psed_6491 NC_015312.1 6872694 6873557 R KEGG: rpe:RPE_2275 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit P20 complement(6872694..6873557) Pseudonocardia dioxanivorans CB1190 10368347 YP_004336434.1 CDS Psed_6492 NC_015312.1 6873620 6875959 R PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PASTA; KEGG: sen:SACE_0314 penicillin binding protein (class A); SMART: PASTA; peptidoglycan glycosyltransferase complement(6873620..6875959) Pseudonocardia dioxanivorans CB1190 10368348 YP_004336435.1 CDS Psed_6493 NC_015312.1 6876166 6876522 D PFAM: Transcription factor WhiB; KEGG: ami:Amir_0236 transcription factor WhiB; transcription factor WhiB 6876166..6876522 Pseudonocardia dioxanivorans CB1190 10368349 YP_004336436.1 CDS Psed_6494 NC_015312.1 6876910 6877227 D SMART: Transcription regulator AbrB/SpoV, predicted; manually curated; TIGRFAM: Transcription regulator AbrB; KEGG: mno:Mnod_8631 SpoVT/AbrB domain protein; PFAM: Transcription regulator AbrB/SpoV, predicted; AbrB family transcriptional regulator 6876910..6877227 Pseudonocardia dioxanivorans CB1190 10368350 YP_004336437.1 CDS Psed_6495 NC_015312.1 6877224 6877646 D PFAM: PilT protein, N-terminal; KEGG: tkm:TK90_1566 PilT protein domain protein; twitching motility protein PilT 6877224..6877646 Pseudonocardia dioxanivorans CB1190 10368351 YP_004336438.1 CDS Psed_6496 NC_015312.1 6878382 6878678 R KEGG: rop:ROP_28280 hypothetical protein; hypothetical protein complement(6878382..6878678) Pseudonocardia dioxanivorans CB1190 10368352 YP_004336439.1 CDS Psed_6497 NC_015312.1 6879215 6880396 R KEGG: svi:Svir_36230 oxyanion-translocating ATPase; oxyanion-translocating ATPase complement(6879215..6880396) Pseudonocardia dioxanivorans CB1190 10368353 YP_004336440.1 CDS Psed_6498 NC_015312.1 6880393 6881421 R KEGG: svi:Svir_36220 oxyanion-translocating ATPase; oxyanion-translocating ATPase complement(6880393..6881421) Pseudonocardia dioxanivorans CB1190 10368354 YP_004336441.1 CDS Psed_6499 NC_015312.1 6881535 6881714 D KEGG: mcu:HMPREF0573_10749 hypothetical protein; hypothetical protein 6881535..6881714 Pseudonocardia dioxanivorans CB1190 10368355 YP_004336442.1 CDS Psed_6500 NC_015312.1 6881718 6882173 D PFAM: Endoribonuclease L-PSP; KEGG: mav:MAV_0451 translation initiation inhibitor; endoribonuclease L-PSP 6881718..6882173 Pseudonocardia dioxanivorans CB1190 10368356 YP_004336443.1 CDS Psed_6501 NC_015312.1 6882176 6882787 D KEGG: ami:Amir_0242 hypothetical protein; hypothetical protein 6882176..6882787 Pseudonocardia dioxanivorans CB1190 10368357 YP_004336444.1 CDS Psed_6502 NC_015312.1 6882855 6885614 D KEGG: ssc:100113399 basic proline-rich protein; hypothetical protein 6882855..6885614 Pseudonocardia dioxanivorans CB1190 10368358 YP_004336445.1 CDS Psed_6503 NC_015312.1 6885640 6886530 R PFAM: Oxidoreductase, N-terminal; KEGG: amd:AMED_9030 hypothetical protein; oxidoreductase domain-containing protein complement(6885640..6886530) Pseudonocardia dioxanivorans CB1190 10368359 YP_004336446.1 CDS Psed_6504 NC_015312.1 6886602 6887429 D PFAM: NUDIX hydrolase domain; KEGG: req:REQ_31840 NUDIX superfamily hydrolase; NUDIX hydrolase 6886602..6887429 Pseudonocardia dioxanivorans CB1190 10368360 YP_004336447.1 CDS Psed_6505 NC_015312.1 6887426 6888223 D KEGG: ami:Amir_0248 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 6887426..6888223 Pseudonocardia dioxanivorans CB1190 10368361 YP_004336448.1 CDS Psed_6506 NC_015312.1 6888234 6889463 R PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_8834 major facilitator transporter; major facilitator superfamily protein complement(6888234..6889463) Pseudonocardia dioxanivorans CB1190 10368362 YP_004336449.1 CDS Psed_6507 NC_015312.1 6889517 6890191 R KEGG: ami:Amir_0253 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator complement(6889517..6890191) Pseudonocardia dioxanivorans CB1190 10368363 YP_004336450.1 CDS Psed_6508 NC_015312.1 6890336 6890665 R KEGG: ami:Amir_0254 hypothetical protein; hypothetical protein complement(6890336..6890665) Pseudonocardia dioxanivorans CB1190 10368364 YP_004336451.1 CDS Psed_6509 NC_015312.1 6890668 6891567 D SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: mjl:Mjls_5203 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; endonuclease III 6890668..6891567 Pseudonocardia dioxanivorans CB1190 10368365 YP_004336452.1 CDS Psed_6510 NC_015312.1 6891593 6892246 D PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sen:SACE_0332 redoxin; alkyl hydroperoxide reductase 6891593..6892246 Pseudonocardia dioxanivorans CB1190 10368366 YP_004336453.1 CDS Psed_6511 NC_015312.1 6892243 6892941 D PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_0257 NUDIX hydrolase; NUDIX hydrolase 6892243..6892941 Pseudonocardia dioxanivorans CB1190 10368367 YP_004336454.1 CDS Psed_6512 NC_015312.1 6893103 6894305 D PFAM: Colicin V production, CvpA; Peptidase S1/S6, chymotrypsin/Hap; KEGG: sen:SACE_0334 membrane-associated serine protease; colicin V production protein 6893103..6894305 Pseudonocardia dioxanivorans CB1190 10368368 YP_004336455.1 CDS Psed_6513 NC_015312.1 6895010 6896290 R KEGG: svi:Svir_38190 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; adenylosuccinate synthetase complement(6895010..6896290) Pseudonocardia dioxanivorans CB1190 10368369 YP_004336456.1 CDS Psed_6514 NC_015312.1 6896392 6897069 D KEGG: svi:Svir_38200 hypothetical protein; hypothetical protein 6896392..6897069 Pseudonocardia dioxanivorans CB1190 10368370 YP_004336457.1 CDS Psed_6515 NC_015312.1 6897146 6897448 D PFAM: Urease, alpha/gamma subunit; TIGRFAM: Urease, alpha/gamma subunit; HAMAP: Urease, gamma subunit; KEGG: amd:AMED_8450 urease gamma subunit; urease subunit gamma 6897146..6897448 Pseudonocardia dioxanivorans CB1190 10368371 YP_004336458.1 CDS Psed_6516 NC_015312.1 6897448 6897825 D PFAM: Urease, beta subunit; TIGRFAM: Urease, beta subunit; HAMAP: Urease, beta subunit; KEGG: ami:Amir_0507 urease, beta subunit; urease subunit beta 6897448..6897825 Pseudonocardia dioxanivorans CB1190 10368372 YP_004336459.1 CDS Psed_6517 NC_015312.1 6897822 6899534 D PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease, alpha subunit; KEGG: amd:AMED_8448 urease alpha subunit; urease subunit alpha 6897822..6899534 Pseudonocardia dioxanivorans CB1190 10368373 YP_004336460.1 CDS Psed_6518 NC_015312.1 6899534 6900217 D KEGG: sen:SACE_0637 urease accessory protein; urease accessory protein 6899534..6900217 Pseudonocardia dioxanivorans CB1190 10368374 YP_004336461.1 CDS Psed_6519 NC_015312.1 6900207 6900920 D TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: amd:AMED_8446 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; urease accessory protein ureG 6900207..6900920 Pseudonocardia dioxanivorans CB1190 10368375 YP_004336462.1 CDS Psed_6520 NC_015312.1 6900922 6901773 D KEGG: sen:SACE_0639 urease accessory protein; HAMAP: Urease accessory protein UreD; PFAM: Urease accessory protein UreD; urease accessory protein ureD 6900922..6901773 Pseudonocardia dioxanivorans CB1190 10368376 YP_004336463.1 CDS Psed_6521 NC_015312.1 6901737 6902411 R KEGG: svi:Svir_06320 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(6901737..6902411) Pseudonocardia dioxanivorans CB1190 10368377 YP_004336464.1 CDS Psed_6522 NC_015312.1 6902634 6903047 R KEGG: mjl:Mjls_0494 hypothetical protein; hypothetical protein complement(6902634..6903047) Pseudonocardia dioxanivorans CB1190 10368378 YP_004336465.1 CDS Psed_6523 NC_015312.1 6903159 6904190 R TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; KEGG: sen:SACE_7180 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase complement(6903159..6904190) Pseudonocardia dioxanivorans CB1190 10368379 YP_004336466.1 CDS Psed_6524 NC_015312.1 6904290 6905024 D KEGG: svi:Svir_38280 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family; TIGRFAM: RNA polymerase sigma-E type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 6904290..6905024 Pseudonocardia dioxanivorans CB1190 10368380 YP_004336467.1 CDS Psed_6525 NC_015312.1 6905057 6905476 D hypothetical protein 6905057..6905476 Pseudonocardia dioxanivorans CB1190 10368381 YP_004336468.1 CDS Psed_6526 NC_015312.1 6905505 6906191 D PFAM: SNARE associated Golgi protein; KEGG: ami:Amir_6926 SNARE associated Golgi protein; hypothetical protein 6905505..6906191 Pseudonocardia dioxanivorans CB1190 10368382 YP_004336469.1 CDS Psed_6527 NC_015312.1 6906235 6907092 D PFAM: SNARE associated Golgi protein; KEGG: ami:Amir_6928 SNARE associated Golgi protein; hypothetical protein 6906235..6907092 Pseudonocardia dioxanivorans CB1190 10368383 YP_004336470.1 CDS Psed_6528 NC_015312.1 6907097 6908149 R PFAM: Glycoside hydrolase, family 76; KEGG: ami:Amir_6932 glycoside hydrolase 76; glycosyl hydrolase protein complement(6907097..6908149) Pseudonocardia dioxanivorans CB1190 10368384 YP_004336471.1 CDS Psed_6529 NC_015312.1 6908208 6909659 R KEGG: amd:AMED_4850 hypothetical protein; PFAM: Amidohydrolase 1; S-adenosylhomocysteine deaminase complement(6908208..6909659) Pseudonocardia dioxanivorans CB1190 10368385 YP_004336472.1 CDS Psed_6530 NC_015312.1 6909876 6910679 D KEGG: amd:AMED_4851 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal; IclR family transcriptional regulator 6909876..6910679 Pseudonocardia dioxanivorans CB1190 10368386 YP_004336473.1 CDS Psed_6531 NC_015312.1 6910748 6911929 D KEGG: amd:AMED_4852 predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase III; formyl-CoA transferase 6910748..6911929 Pseudonocardia dioxanivorans CB1190 10368387 YP_004336474.1 CDS Psed_6532 NC_015312.1 6911922 6912737 D KEGG: nml:Namu_0045 citrate synthase; citrate synthase 6911922..6912737 Pseudonocardia dioxanivorans CB1190 10368388 YP_004336475.1 CDS Psed_6533 NC_015312.1 6912730 6913596 D PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: nml:Namu_0046 extradiol ring-cleavage dioxygenase class III protein subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 6912730..6913596 Pseudonocardia dioxanivorans CB1190 10368389 YP_004336476.1 CDS Psed_6534 NC_015312.1 6913589 6913951 D KEGG: nml:Namu_0047 hypothetical protein; hypothetical protein 6913589..6913951 Pseudonocardia dioxanivorans CB1190 10368390 YP_004336477.1 CDS Psed_6535 NC_015312.1 6913948 6914919 D KEGG: nml:Namu_0050 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; alcohol dehydrogenase 6913948..6914919 Pseudonocardia dioxanivorans CB1190 10368391 YP_004336478.1 CDS Psed_6536 NC_015312.1 6914941 6915855 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: fre:Franean1_1892 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein complement(6914941..6915855) Pseudonocardia dioxanivorans CB1190 10368392 YP_004336479.1 CDS Psed_6537 NC_015312.1 6916017 6916703 R PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: svi:Svir_38470 rRNA methylase; tRNA/rRNA methyltransferase SpoU complement(6916017..6916703) Pseudonocardia dioxanivorans CB1190 10368393 YP_004336480.1 CDS Psed_6538 NC_015312.1 6916879 6919293 R KEGG: sro:Sros_6483 ATP-dependent Zn protease-like protein; PFAM: ATPase, AAA-type, core; Peptidase M41; SMART: ATPase, AAA+ type, core; ATPase AAA complement(6916879..6919293) Pseudonocardia dioxanivorans CB1190 10368394 YP_004336481.1 CDS Psed_6539 NC_015312.1 6919290 6919958 R KEGG: sro:Sros_6484 hypothetical protein; hypothetical protein complement(6919290..6919958) Pseudonocardia dioxanivorans CB1190 10368395 YP_004336482.1 CDS Psed_6540 NC_015312.1 6920113 6920664 R TIGRFAM: Orotate phosphoribosyl transferase, clade 1; KEGG: svi:Svir_38490 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; orotate phosphoribosyltransferase complement(6920113..6920664) Pseudonocardia dioxanivorans CB1190 10368396 YP_004336483.1 CDS Psed_6541 NC_015312.1 6920792 6921565 R KEGG: ami:Amir_6941 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; short-chain dehydrogenase/reductase SDR complement(6920792..6921565) Pseudonocardia dioxanivorans CB1190 10368397 YP_004336484.1 CDS Psed_6542 NC_015312.1 6921787 6922449 R KEGG: sen:SACE_7191 hypothetical protein; hypothetical protein complement(6921787..6922449) Pseudonocardia dioxanivorans CB1190 10368398 YP_004336485.1 CDS Psed_6543 NC_015312.1 6922516 6923469 R KEGG: amd:AMED_6632 hypothetical protein; hypothetical protein complement(6922516..6923469) Pseudonocardia dioxanivorans CB1190 10368399 YP_004336486.1 CDS Psed_6544 NC_015312.1 6923466 6923771 R hypothetical protein complement(6923466..6923771) Pseudonocardia dioxanivorans CB1190 10368400 YP_004336487.1 CDS Psed_6546 NC_015312.1 6925275 6925637 R KEGG: ami:Amir_3481 hypothetical protein; hypothetical protein complement(6925275..6925637) Pseudonocardia dioxanivorans CB1190 10368402 YP_004336488.1 CDS Psed_6547 NC_015312.1 6925746 6928361 R TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: ami:Amir_6943 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB complement(6925746..6928361) Pseudonocardia dioxanivorans CB1190 10368403 YP_004336489.1 CDS Psed_6548 NC_015312.1 6928516 6929727 D PFAM: ATPase, AAA-type, core; KEGG: mmi:MMAR_1535 ATPase; SMART: ATPase, AAA+ type, core; Microtubule-severing ATPase 6928516..6929727 Pseudonocardia dioxanivorans CB1190 10368404 YP_004336490.1 CDS Psed_6549 NC_015312.1 6929797 6930834 D PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; KEGG: mmi:MMAR_1536 hypothetical protein; hypothetical protein 6929797..6930834 Pseudonocardia dioxanivorans CB1190 10368405 YP_004336491.1 CDS Psed_6550 NC_015312.1 6930842 6931564 R KEGG: sen:SACE_7205 hypothetical protein; manually curated; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; pyridoxamine 5'-phosphate oxidase-related FMN-binding protein complement(6930842..6931564) Pseudonocardia dioxanivorans CB1190 10368406 YP_004336492.1 CDS Psed_6551 NC_015312.1 6931871 6933067 D KEGG: ami:Amir_6945 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Globin, subset; Oxidoreductase, FAD-binding domain; nitric oxide dioxygenase 6931871..6933067 Pseudonocardia dioxanivorans CB1190 10368407 YP_004336493.1 CDS Psed_6552 NC_015312.1 6933215 6933682 R KEGG: sen:SACE_7207 heat shock regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(6933215..6933682) Pseudonocardia dioxanivorans CB1190 10368408 YP_004336494.1 CDS Psed_6553 NC_015312.1 6933688 6934875 R SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: ami:Amir_6947 chaperone protein DnaJ; HAMAP: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ complement(6933688..6934875) Pseudonocardia dioxanivorans CB1190 10368409 YP_004336495.1 CDS Psed_6554 NC_015312.1 6934895 6935593 R KEGG: amd:AMED_9165 molecular chaperone GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE complement(6934895..6935593) Pseudonocardia dioxanivorans CB1190 10368410 YP_004336496.1 CDS Psed_6555 NC_015312.1 6935590 6937446 R TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: ami:Amir_6949 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK complement(6935590..6937446) Pseudonocardia dioxanivorans CB1190 10368411 YP_004336497.1 CDS Psed_6556 NC_015312.1 6938803 6940059 D KEGG: sen:SACE_2096 PE-PGRS family protein; hypothetical protein 6938803..6940059 Pseudonocardia dioxanivorans CB1190 10368412 YP_004336498.1 CDS Psed_6557 NC_015312.1 6940056 6940823 D KEGG: svi:Svir_38140 hypothetical protein; hypothetical protein 6940056..6940823 Pseudonocardia dioxanivorans CB1190 10368413 YP_004336499.1 CDS Psed_6558 NC_015312.1 6941200 6941631 R KEGG: sen:SACE_1599 hypothetical protein; hypothetical protein complement(6941200..6941631) Pseudonocardia dioxanivorans CB1190 10368414 YP_004336500.1 CDS Psed_6559 NC_015312.1 6941678 6942694 R PFAM: NLP/P60; KEGG: amd:AMED_1189 lipoprotein; NLP/P60 protein complement(6941678..6942694) Pseudonocardia dioxanivorans CB1190 10368415 YP_004336501.1 CDS Psed_6560 NC_015312.1 6942699 6943286 R KEGG: amd:AMED_1188 hypothetical protein; hypothetical protein complement(6942699..6943286) Pseudonocardia dioxanivorans CB1190 10368416 YP_004336502.1 CDS Psed_6561 NC_015312.1 6943289 6945265 R KEGG: sen:SACE_1596 hypothetical protein; hypothetical protein complement(6943289..6945265) Pseudonocardia dioxanivorans CB1190 10368417 YP_004336503.1 CDS Psed_6562 NC_015312.1 6945262 6948318 R KEGG: ami:Amir_0886 hypothetical protein; hypothetical protein complement(6945262..6948318) Pseudonocardia dioxanivorans CB1190 10368418 YP_004336504.1 CDS Psed_6563 NC_015312.1 6948305 6948988 R KEGG: sen:SACE_1594 hypothetical protein; hypothetical protein complement(6948305..6948988) Pseudonocardia dioxanivorans CB1190 10368419 YP_004336505.1 CDS Psed_6564 NC_015312.1 6948993 6949256 R KEGG: amd:AMED_1184 hypothetical protein; hypothetical protein complement(6948993..6949256) Pseudonocardia dioxanivorans CB1190 10368420 YP_004336506.1 CDS Psed_6565 NC_015312.1 6949541 6951835 R PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: amd:AMED_4355 Fe-S oxidoreductase; hypothetical protein complement(6949541..6951835) Pseudonocardia dioxanivorans CB1190 10368421 YP_004336507.1 CDS Psed_6566 NC_015312.1 6952108 6953226 R KEGG: spu:591086 similar to Nucb2b protein; hypothetical protein complement(6952108..6953226) Pseudonocardia dioxanivorans CB1190 10368422 YP_004336508.1 CDS Psed_6567 NC_015312.1 6953380 6953985 R KEGG: sro:Sros_4334 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6953380..6953985) Pseudonocardia dioxanivorans CB1190 10368423 YP_004336509.1 CDS Psed_6568 NC_015312.1 6953982 6955139 R PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: gob:Gobs_4837 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(6953982..6955139) Pseudonocardia dioxanivorans CB1190 10368424 YP_004336510.1 CDS Psed_6569 NC_015312.1 6955243 6956280 D PFAM: ABC transporter-like; KEGG: sen:SACE_0789 ABC-type transporter, ATPase component; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 6955243..6956280 Pseudonocardia dioxanivorans CB1190 10368425 YP_004336511.1 CDS Psed_6570 NC_015312.1 6956277 6957044 D PFAM: ABC-2 type transporter; KEGG: cwo:Cwoe_5631 ABC-2 type transporter; ABC transporter 6956277..6957044 Pseudonocardia dioxanivorans CB1190 10368426 YP_004336512.1 CDS Psed_6571 NC_015312.1 6957068 6957649 R TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: ami:Amir_6959 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain; Deoxycytidine triphosphate deaminase complement(6957068..6957649) Pseudonocardia dioxanivorans CB1190 10368427 YP_004336513.1 CDS Psed_6572 NC_015312.1 6957699 6958817 R PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mjl:Mjls_1351 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(6957699..6958817) Pseudonocardia dioxanivorans CB1190 10368428 YP_004336514.1 CDS Psed_6573 NC_015312.1 6959399 6960478 R PFAM: Monooxygenase, FAD-binding; KEGG: amd:AMED_2379 FAD-dependent oxidoreductase; monooxygenase FAD-binding protein complement(6959399..6960478) Pseudonocardia dioxanivorans CB1190 10368430 YP_004336515.1 CDS Psed_6574 NC_015312.1 6960608 6961222 D PFAM: Tetracycline transcriptional regulator, TetR, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO7624 TetR family transcriptional regulator; tetracycline repressor 6960608..6961222 Pseudonocardia dioxanivorans CB1190 10368431 YP_004336516.1 CDS Psed_6575 NC_015312.1 6961242 6961697 D KEGG: sco:SCO3065 hypothetical protein; hypothetical protein 6961242..6961697 Pseudonocardia dioxanivorans CB1190 10368432 YP_004336517.1 CDS Psed_6576 NC_015312.1 6961705 6962301 D KEGG: cfl:Cfla_3584 ATP-binding membrane protein; ATP-binding membrane protein 6961705..6962301 Pseudonocardia dioxanivorans CB1190 10368433 YP_004336518.1 CDS Psed_6577 NC_015312.1 6962312 6962776 R KEGG: kfl:Kfla_3254 hypothetical protein; hypothetical protein complement(6962312..6962776) Pseudonocardia dioxanivorans CB1190 10368434 YP_004336519.1 CDS Psed_6578 NC_015312.1 6963016 6963777 R KEGG: scl:sce4225 hypothetical protein; hypothetical protein complement(6963016..6963777) Pseudonocardia dioxanivorans CB1190 10368435 YP_004336520.1 CDS Psed_6579 NC_015312.1 6963881 6964924 R PFAM: NLP/P60; KEGG: svi:Svir_07310 cell wall-associated hydrolase, invasion-associated protein; NLP/P60 protein complement(6963881..6964924) Pseudonocardia dioxanivorans CB1190 10368436 YP_004336521.1 CDS Psed_6580 NC_015312.1 6964924 6965424 R KEGG: sen:SACE_1597 hypothetical protein; hypothetical protein complement(6964924..6965424) Pseudonocardia dioxanivorans CB1190 10368437 YP_004336522.1 CDS Psed_6581 NC_015312.1 6965421 6966956 R KEGG: sen:SACE_1596 hypothetical protein; hypothetical protein complement(6965421..6966956) Pseudonocardia dioxanivorans CB1190 10368438 YP_004336523.1 CDS Psed_6582 NC_015312.1 6966953 6969481 R KEGG: svi:Svir_07280 hypothetical protein; hypothetical protein complement(6966953..6969481) Pseudonocardia dioxanivorans CB1190 10368439 YP_004336524.1 CDS Psed_6583 NC_015312.1 6969478 6969882 R KEGG: svi:Svir_07270 hypothetical protein; hypothetical protein complement(6969478..6969882) Pseudonocardia dioxanivorans CB1190 10368440 YP_004336525.1 CDS Psed_6584 NC_015312.1 6970026 6971024 R KEGG: amd:AMED_1801 hypothetical protein; hypothetical protein complement(6970026..6971024) Pseudonocardia dioxanivorans CB1190 10368441 YP_004336526.1 CDS Psed_6585 NC_015312.1 6971259 6972005 D KEGG: kfl:Kfla_2555 hypothetical protein; hypothetical protein 6971259..6972005 Pseudonocardia dioxanivorans CB1190 10368442 YP_004336527.1 CDS Psed_6586 NC_015312.1 6972037 6973602 D KEGG: mva:Mvan_5243 hypothetical protein; hypothetical protein 6972037..6973602 Pseudonocardia dioxanivorans CB1190 10368443 YP_004336528.1 CDS Psed_6587 NC_015312.1 6973605 6975353 D PFAM: Transglycosylase-like; KEGG: svi:Svir_32470 hypothetical protein; transglycosylase-like domain-containing protein 6973605..6975353 Pseudonocardia dioxanivorans CB1190 10368444 YP_004336529.1 CDS Psed_6588 NC_015312.1 6975377 6977041 D KEGG: tfu:Tfu_0073 chromosome partitioning ATPase; chromosome partitioning ATPase 6975377..6977041 Pseudonocardia dioxanivorans CB1190 10368445 YP_004336530.1 CDS Psed_6589 NC_015312.1 6977058 6977876 R KEGG: ske:Sked_11770 hypothetical protein; hypothetical protein complement(6977058..6977876) Pseudonocardia dioxanivorans CB1190 10368446 YP_004336531.1 CDS Psed_6590 NC_015312.1 6978130 6978405 R hypothetical protein complement(6978130..6978405) Pseudonocardia dioxanivorans CB1190 10368447 YP_004336532.1 CDS Psed_6591 NC_015312.1 6978587 6980554 R PFAM: Heat shock protein 70; KEGG: aau:AAur_3285 DnaK family protein; molecular chaperone DnaK complement(6978587..6980554) Pseudonocardia dioxanivorans CB1190 10368448 YP_004336533.1 CDS Psed_6592 NC_015312.1 6980947 6981819 D KEGG: ach:Achl_3085 hypothetical protein; hypothetical protein 6980947..6981819 Pseudonocardia dioxanivorans CB1190 10368449 YP_004336534.1 CDS Psed_6593 NC_015312.1 6981942 6982793 D KEGG: ach:Achl_3085 hypothetical protein; hypothetical protein 6981942..6982793 Pseudonocardia dioxanivorans CB1190 10368450 YP_004336535.1 CDS Psed_6594 NC_015312.1 6982968 6984833 D KEGG: aau:AAur_3282 hypothetical protein; hypothetical protein 6982968..6984833 Pseudonocardia dioxanivorans CB1190 10368451 YP_004336536.1 CDS Psed_6595 NC_015312.1 6984830 6986329 D PFAM: GTP-binding protein, HSR1-related; KEGG: ach:Achl_3083 GTPase of unknown function; GTP-binding protein HSR1-like protein 6984830..6986329 Pseudonocardia dioxanivorans CB1190 10368452 YP_004336537.1 CDS Psed_6596 NC_015312.1 6986438 6986896 R KEGG: amd:AMED_2993 isoquinoline 1-oxidoreductase alpha subunit; PFAM: [2Fe-2S]-binding; Ferredoxin; Isoquinoline 1-oxidoreductase complement(6986438..6986896) Pseudonocardia dioxanivorans CB1190 10368453 YP_004336538.1 CDS Psed_6597 NC_015312.1 6986901 6989162 R KEGG: amd:AMED_2992 isoquinoline 1-oxidoreductase beta subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Isoquinoline 1-oxidoreductase complement(6986901..6989162) Pseudonocardia dioxanivorans CB1190 10368454 YP_004336539.1 CDS Psed_6598 NC_015312.1 6989980 6992787 R KEGG: ami:Amir_0559 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(6989980..6992787) Pseudonocardia dioxanivorans CB1190 10368455 YP_004336540.1 CDS Psed_6599 NC_015312.1 6992976 6994040 R KEGG: ddr:Deide_2p01860 bifunctional protein, precursor : N-acetylmuramoyl-L-alanine amidase; muramoylpentapeptide carboxypeptidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; Twin-arginine translocation pathway, signal sequence, bacterial/archaeal; Peptidoglycan binding-like; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; Peptidoglycan recognition protein, metazoa/bacteria; N-acetylmuramoyl-L-alanine amidase complement(6992976..6994040) Pseudonocardia dioxanivorans CB1190 10368456 YP_004336541.1 CDS Psed_6600 NC_015312.1 6994227 6996086 D PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: ami:Amir_6963 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 6994227..6996086 Pseudonocardia dioxanivorans CB1190 10368457 YP_004336542.1 CDS Psed_6601 NC_015312.1 6996163 6996588 R KEGG: rop:ROP_02680 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein complement(6996163..6996588) Pseudonocardia dioxanivorans CB1190 10368458 YP_004336543.1 CDS Psed_6602 NC_015312.1 6996693 6999149 R PFAM: Vancomycin resistance VanW; KEGG: mva:Mvan_1124 VanW family protein; von Willebrand factor A complement(6996693..6999149) Pseudonocardia dioxanivorans CB1190 10368459 YP_004336544.1 CDS Psed_6603 NC_015312.1 7000245 7000565 R manually curated; PFAM: Chaperonin Cpn10; KEGG: sen:SACE_7319 GroES family molecular chaperone; SMART: Chaperonin Cpn10; chaperonin Cpn10 complement(7000245..7000565) Pseudonocardia dioxanivorans CB1190 10368460 YP_004336545.1 CDS Psed_6604 NC_015312.1 7000790 7001980 R KEGG: sen:SACE_7308 hypothetical protein; hypothetical protein complement(7000790..7001980) Pseudonocardia dioxanivorans CB1190 10368461 YP_004336546.1 CDS Psed_6605 NC_015312.1 7002209 7002823 D PFAM: Protein of unknown function DUF541; KEGG: ami:Amir_6970 protein of unknown function DUF541; hypothetical protein 7002209..7002823 Pseudonocardia dioxanivorans CB1190 10368462 YP_004336547.1 CDS Psed_6606 NC_015312.1 7002820 7003392 D KEGG: ami:Amir_2415 hypothetical protein; hypothetical protein 7002820..7003392 Pseudonocardia dioxanivorans CB1190 10368463 YP_004336548.1 CDS Psed_6607 NC_015312.1 7003835 7004455 R PFAM: FxsA cytoplasmic membrane protein; KEGG: nml:Namu_2963 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein complement(7003835..7004455) Pseudonocardia dioxanivorans CB1190 10368464 YP_004336549.1 CDS Psed_6608 NC_015312.1 7004525 7005943 R KEGG: sen:SACE_7296 dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase complement(7004525..7005943) Pseudonocardia dioxanivorans CB1190 10368465 YP_004336550.1 CDS Psed_6609 NC_015312.1 7005940 7006914 R PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: sen:SACE_7295 pyruvate dehydrogenase E1 component beta subunit; SMART: Transketolase-like, pyrimidine-binding domain; pyruvate dehydrogenase complement(7005940..7006914) Pseudonocardia dioxanivorans CB1190 10368466 YP_004336551.1 CDS Psed_6610 NC_015312.1 7006916 7008163 R TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit subgroup x; KEGG: sen:SACE_7294 pyruvate dehydrogenase E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component; pyruvate dehydrogenase E1 component subunit alpha complement(7006916..7008163) Pseudonocardia dioxanivorans CB1190 10368467 YP_004336552.1 CDS Psed_6611 NC_015312.1 7008403 7008618 R KEGG: amd:AMED_3003 hypothetical protein; hypothetical protein complement(7008403..7008618) Pseudonocardia dioxanivorans CB1190 10368468 YP_004336553.1 CDS Psed_6612 NC_015312.1 7008834 7009754 D KEGG: amd:AMED_9209 ABC transport system substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; ABC transporter substrate-binding protein 7008834..7009754 Pseudonocardia dioxanivorans CB1190 10368469 YP_004336554.1 CDS Psed_6613 NC_015312.1 7009757 7010665 D KEGG: amd:AMED_9208 permease component of ABC-type amino acid transport system; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter permease 7009757..7010665 Pseudonocardia dioxanivorans CB1190 10368470 YP_004336555.1 CDS Psed_6614 NC_015312.1 7010662 7011423 D PFAM: ABC transporter-like; KEGG: sgr:SGR_2239 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 7010662..7011423 Pseudonocardia dioxanivorans CB1190 10368471 YP_004336556.1 CDS Psed_6615 NC_015312.1 7011434 7012015 R KEGG: amd:AMED_9241 carboxymuconolactone decarboxylase; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein complement(7011434..7012015) Pseudonocardia dioxanivorans CB1190 10368472 YP_004336557.1 CDS Psed_6616 NC_015312.1 7012080 7013966 R KEGG: tbi:Tbis_1574 superfamily I DNA/RNA helicase; hypothetical protein complement(7012080..7013966) Pseudonocardia dioxanivorans CB1190 10368473 YP_004336558.1 CDS Psed_6617 NC_015312.1 7014306 7015997 R PFAM: Sodium/solute symporter; KEGG: amd:AMED_9243 solute:Na+ symporter, SSS family; Na+/solute symporter complement(7014306..7015997) Pseudonocardia dioxanivorans CB1190 10368474 YP_004336559.1 CDS Psed_6618 NC_015312.1 7015994 7016287 R KEGG: ami:Amir_6998 hypothetical protein; hypothetical protein complement(7015994..7016287) Pseudonocardia dioxanivorans CB1190 10368475 YP_004336560.1 CDS Psed_6619 NC_015312.1 7016435 7018258 R HAMAP: Phosphoenolpyruvate carboxykinase, GTP-utilising; KEGG: ami:Amir_6994 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising; phosphoenolpyruvate carboxykinase complement(7016435..7018258) Pseudonocardia dioxanivorans CB1190 10368476 YP_004336561.1 CDS Psed_6620 NC_015312.1 7018483 7019259 R KEGG: sro:Sros_4058 esterase; esterase complement(7018483..7019259) Pseudonocardia dioxanivorans CB1190 10368477 YP_004336562.1 CDS Psed_6621 NC_015312.1 7019321 7020277 D KEGG: sro:Sros_4059 helix-turn-helix, type 11; type 11 helix-turn-helix protein 7019321..7020277 Pseudonocardia dioxanivorans CB1190 10368478 YP_004336563.1 CDS Psed_6622 NC_015312.1 7020404 7021372 R KEGG: bcv:Bcav_1650 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(7020404..7021372) Pseudonocardia dioxanivorans CB1190 10368479 YP_004336564.1 CDS Psed_6623 NC_015312.1 7021446 7022114 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: xce:Xcel_2243 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 7021446..7022114 Pseudonocardia dioxanivorans CB1190 10368480 YP_004336565.1 CDS Psed_6624 NC_015312.1 7022074 7023657 R PFAM: Major facilitator superfamily MFS-1; KEGG: bcv:Bcav_3406 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(7022074..7023657) Pseudonocardia dioxanivorans CB1190 10368481 YP_004336566.1 CDS Psed_6625 NC_015312.1 7023886 7024449 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bcv:Bcav_3407 transcriptional regulator, TetR family; TetR family transcriptional regulator 7023886..7024449 Pseudonocardia dioxanivorans CB1190 10368482 YP_004336567.1 CDS Psed_6626 NC_015312.1 7024332 7025897 R KEGG: ami:Amir_4799 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding; pentachlorophenol monooxygenase complement(7024332..7025897) Pseudonocardia dioxanivorans CB1190 10368483 YP_004336568.1 CDS Psed_6627 NC_015312.1 7025990 7026724 D PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_7123 TetR family transcriptional regulator; TetR family transcriptional regulator 7025990..7026724 Pseudonocardia dioxanivorans CB1190 10368484 YP_004336569.1 CDS Psed_6628 NC_015312.1 7026832 7027263 D KEGG: sen:SACE_4158 hypothetical protein; hypothetical protein 7026832..7027263 Pseudonocardia dioxanivorans CB1190 10368485 YP_004336570.1 CDS Psed_6629 NC_015312.1 7027271 7027576 R hypothetical protein complement(7027271..7027576) Pseudonocardia dioxanivorans CB1190 10368486 YP_004336571.1 CDS Psed_6630 NC_015312.1 7027828 7029243 R PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: rer:RER_31370 hypothetical protein; peptidase U62 complement(7027828..7029243) Pseudonocardia dioxanivorans CB1190 10368487 YP_004336572.1 CDS Psed_6631 NC_015312.1 7029240 7030754 R PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: req:REQ_23720 peptidase; peptidase U62 complement(7029240..7030754) Pseudonocardia dioxanivorans CB1190 10368488 YP_004336573.1 CDS Psed_6632 NC_015312.1 7030793 7031146 R hypothetical protein complement(7030793..7031146) Pseudonocardia dioxanivorans CB1190 10368489 YP_004336574.1 CDS Psed_6633 NC_015312.1 7031143 7031946 R KEGG: mjl:Mjls_0164 hypothetical protein; hypothetical protein complement(7031143..7031946) Pseudonocardia dioxanivorans CB1190 10368490 YP_004336575.1 CDS Psed_6634 NC_015312.1 7032018 7034174 R PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: ami:Amir_7071 hypothetical protein; hypothetical protein complement(7032018..7034174) Pseudonocardia dioxanivorans CB1190 10368491 YP_004336576.1 CDS Psed_6635 NC_015312.1 7034332 7035054 D TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N-7) methyltransferase; KEGG: sen:SACE_7256 tRNA (guanine-N7-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 7034332..7035054 Pseudonocardia dioxanivorans CB1190 10368492 YP_004336577.1 CDS Psed_6636 NC_015312.1 7035143 7036396 D KEGG: amd:AMED_4154 nitric-oxide synthase; PFAM: Nitric oxide synthase, oxygenase domain; nitric-oxide synthase 7035143..7036396 Pseudonocardia dioxanivorans CB1190 10368493 YP_004336578.1 CDS Psed_6637 NC_015312.1 7036403 7036861 R KEGG: ace:Acel_1660 phenylacetic acid degradation protein PaaD; TIGRFAM: Phenylacetic acid degradation protein PaaD; Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation protein PaaD complement(7036403..7036861) Pseudonocardia dioxanivorans CB1190 10368494 YP_004336579.1 CDS Psed_6638 NC_015312.1 7036880 7038217 R KEGG: ach:Achl_2866 histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; histidine kinase complement(7036880..7038217) Pseudonocardia dioxanivorans CB1190 10368495 YP_004336580.1 CDS Psed_6639 NC_015312.1 7038219 7038884 R KEGG: gob:Gobs_1115 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(7038219..7038884) Pseudonocardia dioxanivorans CB1190 10368496 YP_004336581.1 CDS Psed_6640 NC_015312.1 7038949 7039995 D PFAM: Bacterial extracellular solute-binding, family 1; KEGG: saq:Sare_1431 extracellular solute-binding protein; ABC transporter substrate-binding protein 7038949..7039995 Pseudonocardia dioxanivorans CB1190 10368497 YP_004336582.1 CDS Psed_6641 NC_015312.1 7040049 7041536 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_3092 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 7040049..7041536 Pseudonocardia dioxanivorans CB1190 10368498 YP_004336583.1 CDS Psed_6642 NC_015312.1 7041533 7042603 D PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: saq:Sare_1429 ABC transporter related; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 7041533..7042603 Pseudonocardia dioxanivorans CB1190 10368499 YP_004336584.1 CDS Psed_6643 NC_015312.1 7042614 7043237 D KEGG: mpa:MAP3642c hypothetical protein; hypothetical protein 7042614..7043237 Pseudonocardia dioxanivorans CB1190 10368500 YP_004336585.1 CDS Psed_6644 NC_015312.1 7043234 7044556 D KEGG: sen:SACE_7247 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase 1; S-adenosylhomocysteine deaminase 7043234..7044556 Pseudonocardia dioxanivorans CB1190 10368501 YP_004336586.1 CDS Psed_6645 NC_015312.1 7044847 7045281 R hypothetical protein complement(7044847..7045281) Pseudonocardia dioxanivorans CB1190 10368502 YP_004336587.1 CDS Psed_6646 NC_015312.1 7046291 7047772 D PFAM: Uncharacterised protein family UPF0118; KEGG: amd:AMED_9310 hypothetical protein; hypothetical protein 7046291..7047772 Pseudonocardia dioxanivorans CB1190 10368503 YP_004336588.1 CDS Psed_6647 NC_015312.1 7047866 7048636 D PFAM: Coenzyme A transferase; KEGG: nfa:nfa35190 CoA transferase A subunit; SMART: Coenzyme A transferase; 3-oxoadipate CoA-transferase 7047866..7048636 Pseudonocardia dioxanivorans CB1190 10368504 YP_004336589.1 CDS Psed_6648 NC_015312.1 7048633 7049436 D PFAM: Coenzyme A transferase; KEGG: nda:Ndas_2284 coenzyme A transferase; SMART: Coenzyme A transferase; 3-oxoadipate CoA-transferase 7048633..7049436 Pseudonocardia dioxanivorans CB1190 10368505 YP_004336590.1 CDS Psed_6649 NC_015312.1 7049433 7050215 D TIGRFAM: 3-oxoadipate enol-lactonase; KEGG: rxy:Rxyl_1578 3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase fold-1; 3-oxoadipate enol-lactonase 7049433..7050215 Pseudonocardia dioxanivorans CB1190 10368506 YP_004336591.1 CDS Psed_6650 NC_015312.1 7050409 7050738 D hypothetical protein 7050409..7050738 Pseudonocardia dioxanivorans CB1190 10368507 YP_004336592.1 CDS Psed_6651 NC_015312.1 7050844 7052253 R TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: svi:Svir_39470 primary replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase complement(7050844..7052253) Pseudonocardia dioxanivorans CB1190 10368508 YP_004336593.1 CDS Psed_6652 NC_015312.1 7052836 7053285 R TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: saq:Sare_5065 50S ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; 50S ribosomal protein L9 complement(7052836..7053285) Pseudonocardia dioxanivorans CB1190 10368509 YP_004336594.1 CDS Psed_6653 NC_015312.1 7053300 7053536 R TIGRFAM: Ribosomal protein S18; HAMAP: Ribosomal protein S18; KEGG: sgr:SGR_3672 30S ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 complement(7053300..7053536) Pseudonocardia dioxanivorans CB1190 10368510 YP_004336595.1 CDS Psed_6654 NC_015312.1 7053602 7054129 R KEGG: amd:AMED_9297 single-strand DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein complement(7053602..7054129) Pseudonocardia dioxanivorans CB1190 10368511 YP_004336596.1 CDS Psed_6655 NC_015312.1 7054140 7054469 R TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; KEGG: req:REQ_46500 30S ribosomal protein S6 RpsF; PFAM: Ribosomal protein S6; 30S ribosomal protein S6 complement(7054140..7054469) Pseudonocardia dioxanivorans CB1190 10368512 YP_004336597.1 CDS Psed_6656 NC_015312.1 7054728 7055498 D PFAM: Xylose isomerase, TIM barrel domain; KEGG: ami:Amir_7037 endonuclease IV; SMART: Endodeoxyribonuclease IV; Deoxyribonuclease IV 7054728..7055498 Pseudonocardia dioxanivorans CB1190 10368513 YP_004336598.1 CDS Psed_6657 NC_015312.1 7055495 7056916 D KEGG: ami:Amir_7036 integral membrane protein; integral membrane protein 7055495..7056916 Pseudonocardia dioxanivorans CB1190 10368514 YP_004336599.1 CDS Psed_6658 NC_015312.1 7056927 7057556 R PFAM: NUDIX hydrolase domain; KEGG: sen:SACE_3330 NUDIX hydrolase; NUDIX hydrolase complement(7056927..7057556) Pseudonocardia dioxanivorans CB1190 10368515 YP_004336600.1 CDS Psed_6659 NC_015312.1 7057631 7058029 D KEGG: nml:Namu_5370 hypothetical protein; hypothetical protein 7057631..7058029 Pseudonocardia dioxanivorans CB1190 10368516 YP_004336601.1 CDS Psed_6660 NC_015312.1 7057965 7059566 R manually curated; KEGG: svi:Svir_39350 predicted integral membrane protein; hypothetical protein complement(7057965..7059566) Pseudonocardia dioxanivorans CB1190 10368517 YP_004336602.1 CDS Psed_6661 NC_015312.1 7059582 7061846 R KEGG: nfa:nfa55570 penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; peptidoglycan glycosyltransferase complement(7059582..7061846) Pseudonocardia dioxanivorans CB1190 10368518 YP_004336603.1 CDS Psed_6662 NC_015312.1 7062165 7062707 R KEGG: ami:Amir_7033 hypothetical protein; hypothetical protein complement(7062165..7062707) Pseudonocardia dioxanivorans CB1190 10368519 YP_004336604.1 CDS Psed_6663 NC_015312.1 7062798 7063379 D PFAM: Transcription regulator PadR N-terminal-like; KEGG: ami:Amir_7032 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 7062798..7063379 Pseudonocardia dioxanivorans CB1190 10368520 YP_004336605.1 CDS Psed_6664 NC_015312.1 7063394 7064473 D KEGG: amd:AMED_9284 myo-inositol-1-phosphate synthase; TIGRFAM: Myo-inositol 1-phosphate synthase, actinobacteria; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like; inositol 1-phosphate synthase 7063394..7064473 Pseudonocardia dioxanivorans CB1190 10368521 YP_004336606.1 CDS Psed_6665 NC_015312.1 7064976 7065530 D PFAM: NLP/P60; KEGG: rop:ROP_08530 NlpC/P60 family protein; NLP/P60 protein 7064976..7065530 Pseudonocardia dioxanivorans CB1190 10368522 YP_004336607.1 CDS Psed_6666 NC_015312.1 7065671 7066417 D PFAM: Uncharacterised protein family UPF0158; KEGG: amd:AMED_5605 hypothetical protein; hypothetical protein 7065671..7066417 Pseudonocardia dioxanivorans CB1190 10368523 YP_004336608.1 CDS Psed_6667 NC_015312.1 7066426 7066848 D PFAM: HEPN; KEGG: tga:TGAM_0259 hypothetical protein; HEPN domain-containing protein 7066426..7066848 Pseudonocardia dioxanivorans CB1190 10368524 YP_004336609.1 CDS Psed_6668 NC_015312.1 7066866 7069736 R TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: sen:SACE_7373 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(7066866..7069736) Pseudonocardia dioxanivorans CB1190 10368525 YP_004336610.1 CDS Psed_6669 NC_015312.1 7069962 7070417 D KEGG: sen:SACE_7375 hypothetical protein; hypothetical protein 7069962..7070417 Pseudonocardia dioxanivorans CB1190 10368526 YP_004336611.1 CDS Psed_6670 NC_015312.1 7070410 7071015 R KEGG: ami:Amir_7076 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; hypothetical protein complement(7070410..7071015) Pseudonocardia dioxanivorans CB1190 10368527 YP_004336612.1 CDS Psed_6671 NC_015312.1 7071051 7072409 D PFAM: Major facilitator superfamily MFS-1; KEGG: ami:Amir_7077 major facilitator superfamily MFS_1; major facilitator superfamily protein 7071051..7072409 Pseudonocardia dioxanivorans CB1190 10368528 YP_004336613.1 CDS Psed_6672 NC_015312.1 7072416 7074053 R KEGG: svi:Svir_39600 tRNA adenylyltransferase; TIGRFAM: tRNA adenylyltransferase; Uncharacterised protein family HDIG; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; polynucleotide adenylyltransferase complement(7072416..7074053) Pseudonocardia dioxanivorans CB1190 10368529 YP_004336614.1 CDS Psed_6673 NC_015312.1 7074060 7074554 D PFAM: NUDIX hydrolase domain; KEGG: ami:Amir_7080 NUDIX hydrolase; NUDIX hydrolase 7074060..7074554 Pseudonocardia dioxanivorans CB1190 10368530 YP_004336615.1 CDS Psed_6674 NC_015312.1 7074551 7076905 D KEGG: ami:Amir_7081 hypothetical protein; hypothetical protein 7074551..7076905 Pseudonocardia dioxanivorans CB1190 10368531 YP_004336616.1 CDS Psed_6675 NC_015312.1 7077045 7078751 D KEGG: ami:Amir_7083 hypothetical protein; hypothetical protein 7077045..7078751 Pseudonocardia dioxanivorans CB1190 10368532 YP_004336617.1 CDS Psed_6676 NC_015312.1 7078821 7079369 D KEGG: ami:Amir_7084 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 7078821..7079369 Pseudonocardia dioxanivorans CB1190 10368533 YP_004336618.1 CDS Psed_6677 NC_015312.1 7079369 7081027 D KEGG: tcr:506959.90 hypothetical protein; hypothetical protein 7079369..7081027 Pseudonocardia dioxanivorans CB1190 10368534 YP_004336619.1 CDS Psed_6678 NC_015312.1 7081143 7082141 D TIGRFAM: Thioredoxin reductase; KEGG: sen:SACE_7384 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 7081143..7082141 Pseudonocardia dioxanivorans CB1190 10368535 YP_004336620.1 CDS Psed_6679 NC_015312.1 7082231 7082560 D KEGG: rer:RER_60210 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 7082231..7082560 Pseudonocardia dioxanivorans CB1190 10368536 YP_004336621.1 CDS Psed_6680 NC_015312.1 7082777 7083943 D KEGG: sen:SACE_7386 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan binding-like; SMART: Cell wall hydrolase/autolysin, catalytic; cell wall hydrolase/autolysin 7082777..7083943 Pseudonocardia dioxanivorans CB1190 10368537 YP_004336622.1 CDS Psed_6681 NC_015312.1 7083993 7084637 R KEGG: amd:AMED_9356 hypothetical protein; hypothetical protein complement(7083993..7084637) Pseudonocardia dioxanivorans CB1190 10368538 YP_004336623.1 CDS Psed_6682 NC_015312.1 7084667 7086172 D KEGG: amd:AMED_9357 aminotransferase AvtA; PFAM: Aminotransferase, class I/classII; GntR family transcriptional regulator 7084667..7086172 Pseudonocardia dioxanivorans CB1190 10368539 YP_004336624.1 CDS Psed_6683 NC_015312.1 7086225 7087172 D HAMAP: D-alanine--D-alanine ligase; KEGG: ami:Amir_7091 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; D-alanine--D-alanine ligase 7086225..7087172 Pseudonocardia dioxanivorans CB1190 10368540 YP_004336625.1 CDS Psed_6684 NC_015312.1 7088612 7090258 D KEGG: oaa:100075123 similar to splicing coactivator subunit SRm300; hypothetical protein 7088612..7090258 Pseudonocardia dioxanivorans CB1190 10368541 YP_004336626.1 CDS Psed_6685 NC_015312.1 7090915 7091877 R TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: ami:Amir_7092 ParB-like partition protein; SMART: ParB-like nuclease; parB-like partition protein complement(7090915..7091877) Pseudonocardia dioxanivorans CB1190 10368542 YP_004336627.1 CDS Psed_6686 NC_015312.1 7091881 7092741 R KEGG: ami:Amir_7093 cobyrinic acid ac-diamide synthase; manually curated; PFAM: Cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(7091881..7092741) Pseudonocardia dioxanivorans CB1190 10368543 YP_004336628.1 CDS Psed_6687 NC_015312.1 7092834 7093490 R TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: svi:Svir_39750 glucose-inhibited division protein B; PFAM: rRNA small subunit methyltransferase G; ribosomal RNA small subunit methyltransferase G complement(7092834..7093490) Pseudonocardia dioxanivorans CB1190 10368544 YP_004336629.1 CDS Psed_6688 NC_015312.1 7093522 7094046 R KEGG: sen:SACE_7393 single-stranded nucleic acid binding R3H; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; single-stranded nucleic acid binding R3H domain-containing protein complement(7093522..7094046) Pseudonocardia dioxanivorans CB1190 10368545 YP_004336630.1 CDS Psed_6689 NC_015312.1 7094150 7095247 R KEGG: ami:Amir_7097 60 kDa inner membrane insertion protein; TIGRFAM: Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC; hypothetical protein complement(7094150..7095247) Pseudonocardia dioxanivorans CB1190 10368546 YP_004336631.1 CDS Psed_6690 NC_015312.1 7095241 7095627 R TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: ami:Amir_7098 protein of unknown function DUF37; PFAM: Protein of unknown function DUF37; hypothetical protein complement(7095241..7095627) Pseudonocardia dioxanivorans CB1190 10368547 YP_004336632.1 CDS Psed_6691 NC_015312.1 7095624 7095983 R TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: svi:Svir_39790 ribonuclease P protein component; PFAM: Ribonuclease P; Ribonuclease P protein component complement(7095624..7095983) Pseudonocardia dioxanivorans CB1190 10368548 YP_004336633.1 CDS Psed_6692 NC_015312.1 7095996 7096139 R TIGRFAM: Ribosomal protein L34; HAMAP: Ribosomal protein L34; KEGG: cpu:cpfrc_02110 50S ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 complement(7095996..7096139) Pseudonocardia dioxanivorans CB1190 10368549 YP_004336634.1 CDS Psed_7012 NC_015313.1 1620 4226 R TIGRFAM: DNA primase, phage/plasmid; PFAM: Phage/plasmid primase, P4, C-terminal; KEGG: afl:Aflv_0784 phage associated DNA primase; SMART: Phage/plasmid primase, P4, C-terminal; P4 family phage/plasmid primase complement(1620..4226) Pseudonocardia dioxanivorans CB1190 10361801 YP_004336635.1 CDS Psed_7013 NC_015313.1 4518 5090 R hypothetical protein complement(4518..5090) Pseudonocardia dioxanivorans CB1190 10361788 YP_004336636.1 CDS Psed_7014 NC_015313.1 5506 5745 R hypothetical protein complement(5506..5745) Pseudonocardia dioxanivorans CB1190 10361789 YP_004336637.1 CDS Psed_7015 NC_015313.1 5745 5930 R hypothetical protein complement(5745..5930) Pseudonocardia dioxanivorans CB1190 10361790 YP_004336638.1 CDS Psed_7016 NC_015313.1 5927 6313 R hypothetical protein complement(5927..6313) Pseudonocardia dioxanivorans CB1190 10361791 YP_004336639.1 CDS Psed_7017 NC_015313.1 6319 6552 R hypothetical protein complement(6319..6552) Pseudonocardia dioxanivorans CB1190 10361792 YP_004336640.1 CDS Psed_7018 NC_015313.1 6895 7506 D KEGG: cms:CMS_pCSL0098 putative partitioning protein ParA; putative partitioning protein ParA 6895..7506 Pseudonocardia dioxanivorans CB1190 10361793 YP_004336641.1 CDS Psed_7019 NC_015313.1 7496 7951 D hypothetical protein 7496..7951 Pseudonocardia dioxanivorans CB1190 10361794 YP_004336642.1 CDS Psed_7020 NC_015313.1 8035 8874 D KEGG: sma:SAV_2075 hypothetical protein; hypothetical protein 8035..8874 Pseudonocardia dioxanivorans CB1190 10361795 YP_004336643.1 CDS Psed_7021 NC_015313.1 8976 9425 D hypothetical protein 8976..9425 Pseudonocardia dioxanivorans CB1190 10361796 YP_004336644.1 CDS Psed_7022 NC_015313.1 9425 11407 D PFAM: Cell divisionFtsK/SpoIIIE; KEGG: mil:ML5_1658 hypothetical protein; cell division protein FtsK/SpoIIIE 9425..11407 Pseudonocardia dioxanivorans CB1190 10361797 YP_004336645.1 CDS Psed_7023 NC_015313.1 12024 12938 D hypothetical protein 12024..12938 Pseudonocardia dioxanivorans CB1190 10361798 YP_004336646.1 CDS Psed_7024 NC_015313.1 12935 13573 D hypothetical protein 12935..13573 Pseudonocardia dioxanivorans CB1190 10361799 YP_004336647.1 CDS Psed_7025 NC_015313.1 13607 13912 D hypothetical protein 13607..13912 Pseudonocardia dioxanivorans CB1190 10361800 YP_004336648.1 CDS Psed_6693 NC_015314.1 302 601 D hypothetical protein 302..601 Pseudonocardia dioxanivorans CB1190 10359556 YP_004336649.1 CDS Psed_6694 NC_015314.1 737 2170 D hypothetical protein 737..2170 Pseudonocardia dioxanivorans CB1190 10359365 YP_004336650.1 CDS Psed_6696 NC_015314.1 3940 4443 D KEGG: cai:Caci_6923 hypothetical protein; hypothetical protein 3940..4443 Pseudonocardia dioxanivorans CB1190 10359537 YP_004336651.1 CDS Psed_6697 NC_015314.1 4609 5208 D PFAM: IstB-like ATP-binding protein; KEGG: tpr:Tpau_1025 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 4609..5208 Pseudonocardia dioxanivorans CB1190 10359367 YP_004336652.1 CDS Psed_6698 NC_015314.1 5164 7002 R PFAM: Polysaccharide biosynthesis protein; KEGG: rop:ROP_57940 putative polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(5164..7002) Pseudonocardia dioxanivorans CB1190 10359368 YP_004336653.1 CDS Psed_6699 NC_015314.1 7142 7786 R PFAM: Methyltransferase type 11; KEGG: sfu:Sfum_3434 methyltransferase type 11; Methyltransferase type 11 complement(7142..7786) Pseudonocardia dioxanivorans CB1190 10359369 YP_004336654.1 CDS Psed_6702 NC_015314.1 11592 12467 R TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nfa:pnf220 putative chromosome partitioning protein; SMART: ParB-like nuclease; parB-like partition protein complement(11592..12467) Pseudonocardia dioxanivorans CB1190 10359539 YP_004336655.1 CDS Psed_6703 NC_015314.1 12471 13208 R KEGG: mkm:Mkms_5580 putative plasmid partitioning protein; putative plasmid partitioning protein complement(12471..13208) Pseudonocardia dioxanivorans CB1190 10359371 YP_004336656.1 CDS Psed_6704 NC_015314.1 14423 15598 R PFAM: Integrase, catalytic core; KEGG: nml:Namu_3083 integrase catalytic subunit; integrase catalytic subunit complement(14423..15598) Pseudonocardia dioxanivorans CB1190 10359372 YP_004336657.1 CDS Psed_6705 NC_015314.1 16211 17287 R hypothetical protein complement(16211..17287) Pseudonocardia dioxanivorans CB1190 10359373 YP_004336658.1 CDS Psed_6706 NC_015314.1 18250 18591 D hypothetical protein 18250..18591 Pseudonocardia dioxanivorans CB1190 10359374 YP_004336659.1 CDS Psed_6707 NC_015314.1 18711 21914 D PFAM: Transposase, Tn3; KEGG: sro:Sros_4723 transposase, Tn3 family; transposase Tn3 family protein 18711..21914 Pseudonocardia dioxanivorans CB1190 10359375 YP_004336660.1 CDS Psed_6709 NC_015314.1 23420 24697 D PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 23420..24697 Pseudonocardia dioxanivorans CB1190 10359540 YP_004336661.1 CDS Psed_6710 NC_015314.1 24802 25524 R PFAM: Cation efflux protein; KEGG: sco:SCO3521 integral membrane protein; cation efflux protein complement(24802..25524) Pseudonocardia dioxanivorans CB1190 10359377 YP_004336662.1 CDS Psed_6711 NC_015314.1 25526 25876 R KEGG: sco:SCO3522 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(25526..25876) Pseudonocardia dioxanivorans CB1190 10359378 YP_004336663.1 CDS Psed_6712 NC_015314.1 26054 26722 D KEGG: fra:Francci3_2363 resolvase-like protein; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal; Resolvase domain-containing protein 26054..26722 Pseudonocardia dioxanivorans CB1190 10359379 YP_004336664.1 CDS Psed_6713 NC_015314.1 26906 28183 R PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type complement(26906..28183) Pseudonocardia dioxanivorans CB1190 10359380 YP_004336665.1 CDS Psed_6715 NC_015314.1 28787 30163 R TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: hla:Hlac_2992 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase complement(28787..30163) Pseudonocardia dioxanivorans CB1190 10359541 YP_004336666.1 CDS Psed_6716 NC_015314.1 30211 30561 R hypothetical protein complement(30211..30561) Pseudonocardia dioxanivorans CB1190 10359382 YP_004336667.1 CDS Psed_6717 NC_015314.1 30686 31321 R KEGG: sgr:SGR_6027 putative integral membrane protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; Vitamin K epoxide reductase complement(30686..31321) Pseudonocardia dioxanivorans CB1190 10359383 YP_004336668.1 CDS Psed_6718 NC_015314.1 31403 32362 R PFAM: Cytochrome c assembly protein, transmembrane domain; KEGG: msp:Mspyr1_25040 cytochrome c biogenesis protein; cytochrome c biogenesis protein transmembrane region complement(31403..32362) Pseudonocardia dioxanivorans CB1190 10359384 YP_004336669.1 CDS Psed_6719 NC_015314.1 32362 32928 R PFAM: Redoxin; KEGG: mgi:Mflv_3216 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; Redoxin domain-containing protein complement(32362..32928) Pseudonocardia dioxanivorans CB1190 10359385 YP_004336670.1 CDS Psed_6720 NC_015314.1 33051 33350 R KEGG: ach:Achl_4522 hypothetical protein; hypothetical protein complement(33051..33350) Pseudonocardia dioxanivorans CB1190 10359386 YP_004336671.1 CDS Psed_6721 NC_015314.1 33347 33724 R KEGG: gbr:Gbro_2650 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; transcriptional regulator, ArsR family complement(33347..33724) Pseudonocardia dioxanivorans CB1190 10359387 YP_004336672.1 CDS Psed_6722 NC_015314.1 33851 35275 D TIGRFAM: Mercury reductase, MerA; KEGG: mil:ML5_4212 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; mercuric reductase 33851..35275 Pseudonocardia dioxanivorans CB1190 10359388 YP_004336673.1 CDS Psed_6725 NC_015314.1 36584 36748 D hypothetical protein 36584..36748 Pseudonocardia dioxanivorans CB1190 10359543 YP_004336674.1 CDS Psed_6726 NC_015314.1 36981 38048 R PFAM: Integrase, catalytic core, phage; KEGG: fal:FRAAL3720 putative integrase; integrase family protein complement(36981..38048) Pseudonocardia dioxanivorans CB1190 10359390 YP_004336675.1 CDS Psed_6727 NC_015314.1 38262 39020 D KEGG: mkm:Mkms_5581 hypothetical protein; hypothetical protein 38262..39020 Pseudonocardia dioxanivorans CB1190 10359391 YP_004336676.1 CDS Psed_6728 NC_015314.1 39588 41003 R PFAM: Amidase; KEGG: sro:Sros_0559 amidase; Amidase complement(39588..41003) Pseudonocardia dioxanivorans CB1190 10359392 YP_004336677.1 CDS Psed_6729 NC_015314.1 41000 41257 R hypothetical protein complement(41000..41257) Pseudonocardia dioxanivorans CB1190 10359393 YP_004336678.1 CDS Psed_6730 NC_015314.1 41502 42545 D PFAM: Luciferase-like, subgroup; KEGG: yen:YE1950 alkanesulfonate monooxygenase; Luciferase-like, subgroup 41502..42545 Pseudonocardia dioxanivorans CB1190 10359394 YP_004336679.1 CDS Psed_6731 NC_015314.1 42585 43349 R KEGG: nca:Noca_4063 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; GntR domain-containing protein complement(42585..43349) Pseudonocardia dioxanivorans CB1190 10359395 YP_004336680.1 CDS Psed_6732 NC_015314.1 43490 44029 D PFAM: MaoC-like dehydratase; KEGG: nca:Noca_4064 dehydratase; MaoC domain-containing protein dehydratase 43490..44029 Pseudonocardia dioxanivorans CB1190 10359396 YP_004336681.1 CDS Psed_6733 NC_015314.1 44026 45246 D KEGG: sro:Sros_6624 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Formyl-CoA transferase 44026..45246 Pseudonocardia dioxanivorans CB1190 10359397 YP_004336682.1 CDS Psed_6734 NC_015314.1 45248 46411 D KEGG: nca:Noca_4073 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Butyryl-CoA dehydrogenase 45248..46411 Pseudonocardia dioxanivorans CB1190 10359398 YP_004336683.1 CDS Psed_6735 NC_015314.1 46408 47064 D KEGG: amd:AMED_6293 TrpR binding protein WrbA; TIGRFAM: Flavoprotein WrbA; PFAM: Flavodoxin/nitric oxide synthase; flavoprotein WrbA 46408..47064 Pseudonocardia dioxanivorans CB1190 10359399 YP_004336684.1 CDS Psed_6736 NC_015314.1 47061 48668 D PFAM: Amidase; KEGG: nfa:nfa12060 putative amidase; Amidase 47061..48668 Pseudonocardia dioxanivorans CB1190 10359400 YP_004336685.1 CDS Psed_6737 NC_015314.1 48646 49464 D PFAM: Alpha/beta hydrolase fold-1; KEGG: sli:Slin_1265 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 48646..49464 Pseudonocardia dioxanivorans CB1190 10359401 YP_004336686.1 CDS Psed_6738 NC_015314.1 49550 50944 D PFAM: MmgE/PrpD; KEGG: bxe:Bxe_A4086 hypothetical protein; MmgE/PrpD family protein 49550..50944 Pseudonocardia dioxanivorans CB1190 10359402 YP_004336687.1 CDS Psed_6739 NC_015314.1 50934 51479 D manually curated; PFAM: Flavin reductase-like, FMN-binding; KEGG: fre:Franean1_4843 flavin reductase domain-containing protein; SMART: Flavin reductase-like, FMN-binding; flavin reductase domain-containing protein FMN-binding protein 50934..51479 Pseudonocardia dioxanivorans CB1190 10359403 YP_004336688.1 CDS Psed_6740 NC_015314.1 51999 52412 R KEGG: svi:Svir_17410 hypothetical protein; hypothetical protein complement(51999..52412) Pseudonocardia dioxanivorans CB1190 10359404 YP_004336689.1 CDS Psed_6741 NC_015314.1 52651 54531 R KEGG: rcu:RCOM_2060150 hypothetical protein; hypothetical protein complement(52651..54531) Pseudonocardia dioxanivorans CB1190 10359405 YP_004336690.1 CDS Psed_6742 NC_015314.1 54528 55685 R PFAM: NLP/P60; KEGG: mil:ML5_6031 nlp/p60 protein; NLP/P60 protein complement(54528..55685) Pseudonocardia dioxanivorans CB1190 10359406 YP_004336691.1 CDS Psed_6743 NC_015314.1 55761 56531 R KEGG: sro:Sros_1963 hypothetical protein; hypothetical protein complement(55761..56531) Pseudonocardia dioxanivorans CB1190 10359407 YP_004336692.1 CDS Psed_6744 NC_015314.1 56803 58251 R KEGG: scl:sce6360 hypothetical protein; hypothetical protein complement(56803..58251) Pseudonocardia dioxanivorans CB1190 10359408 YP_004336693.1 CDS Psed_6745 NC_015314.1 58248 59921 R KEGG: gob:Gobs_0687 ATP-binding protein; ATP-binding protein complement(58248..59921) Pseudonocardia dioxanivorans CB1190 10359409 YP_004336694.1 CDS Psed_6746 NC_015314.1 59921 61471 R KEGG: gob:Gobs_0686 hypothetical protein; hypothetical protein complement(59921..61471) Pseudonocardia dioxanivorans CB1190 10359410 YP_004336695.1 CDS Psed_6747 NC_015314.1 61468 62961 R KEGG: gob:Gobs_0685 hypothetical protein; hypothetical protein complement(61468..62961) Pseudonocardia dioxanivorans CB1190 10359411 YP_004336696.1 CDS Psed_6748 NC_015314.1 62961 63848 R KEGG: gob:Gobs_0684 hypothetical protein; hypothetical protein complement(62961..63848) Pseudonocardia dioxanivorans CB1190 10359412 YP_004336697.1 CDS Psed_6749 NC_015314.1 63864 64181 R hypothetical protein complement(63864..64181) Pseudonocardia dioxanivorans CB1190 10359413 YP_004336698.1 CDS Psed_6750 NC_015314.1 64178 65161 R KEGG: nca:Noca_4716 hypothetical protein; hypothetical protein complement(64178..65161) Pseudonocardia dioxanivorans CB1190 10359414 YP_004336699.1 CDS Psed_6751 NC_015314.1 65221 67107 R PFAM: Transglycosylase-like; KEGG: zro:ZYRO0F02728g hypothetical protein; Transglycosylase-like domain-containing protein complement(65221..67107) Pseudonocardia dioxanivorans CB1190 10359415 YP_004336700.1 CDS Psed_6752 NC_015314.1 67110 67202 R hypothetical protein complement(67110..67202) Pseudonocardia dioxanivorans CB1190 10359416 YP_004336701.1 CDS Psed_6753 NC_015314.1 67199 68545 R KEGG: mgi:Mflv_1504 hypothetical protein; hypothetical protein complement(67199..68545) Pseudonocardia dioxanivorans CB1190 10359417 YP_004336702.1 CDS Psed_6754 NC_015314.1 68549 70267 R KEGG: mab:MAB_0630 hypothetical protein; hypothetical protein complement(68549..70267) Pseudonocardia dioxanivorans CB1190 10359418 YP_004336703.1 CDS Psed_6755 NC_015314.1 70264 71061 R hypothetical protein complement(70264..71061) Pseudonocardia dioxanivorans CB1190 10359419 YP_004336704.1 CDS Psed_6756 NC_015314.1 71679 72296 D hypothetical protein 71679..72296 Pseudonocardia dioxanivorans CB1190 10359420 YP_004336705.1 CDS Psed_6757 NC_015314.1 72337 73485 D KEGG: esc:Entcl_2744 cell wall surface anchor family protein; hypothetical protein 72337..73485 Pseudonocardia dioxanivorans CB1190 10359421 YP_004336706.1 CDS Psed_6758 NC_015314.1 73550 74164 D KEGG: stp:Strop_4198 hypothetical protein; hypothetical protein 73550..74164 Pseudonocardia dioxanivorans CB1190 10359422 YP_004336707.1 CDS Psed_6759 NC_015314.1 74185 74610 R KEGG: hsa:4583 mucin 2, oligomeric mucus/gel-forming; hypothetical protein complement(74185..74610) Pseudonocardia dioxanivorans CB1190 10359423 YP_004336708.1 CDS Psed_6760 NC_015314.1 74812 75063 R hypothetical protein complement(74812..75063) Pseudonocardia dioxanivorans CB1190 10359424 YP_004336709.1 CDS Psed_6761 NC_015314.1 75085 76581 R KEGG: tpr:Tpau_3922 hypothetical protein; hypothetical protein complement(75085..76581) Pseudonocardia dioxanivorans CB1190 10359425 YP_004336710.1 CDS Psed_6762 NC_015314.1 76948 77475 D KEGG: amd:AMED_1799 hypothetical protein; hypothetical protein 76948..77475 Pseudonocardia dioxanivorans CB1190 10359426 YP_004336711.1 CDS Psed_6763 NC_015314.1 77629 77817 R hypothetical protein complement(77629..77817) Pseudonocardia dioxanivorans CB1190 10359427 YP_004336712.1 CDS Psed_6764 NC_015314.1 78262 78477 D hypothetical protein 78262..78477 Pseudonocardia dioxanivorans CB1190 10359428 YP_004336713.1 CDS Psed_6765 NC_015314.1 78549 79406 D KEGG: ade:Adeh_1681 PE-PGRS family protein; hypothetical protein 78549..79406 Pseudonocardia dioxanivorans CB1190 10359429 YP_004336714.1 CDS Psed_6766 NC_015314.1 79311 79763 R hypothetical protein complement(79311..79763) Pseudonocardia dioxanivorans CB1190 10359430 YP_004336715.1 CDS Psed_6768 NC_015314.1 80358 80990 D KEGG: bbr:BB1120 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 80358..80990 Pseudonocardia dioxanivorans CB1190 10359544 YP_004336716.1 CDS Psed_6769 NC_015314.1 81139 82221 R TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-4; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; KEGG: bbr:BB1122 two-component system sensor kinase; SMART: ATPase-like, ATP-binding domain; PAS; PAS/PAC sensor signal transduction histidine kinase complement(81139..82221) Pseudonocardia dioxanivorans CB1190 10359432 YP_004336717.1 CDS Psed_6770 NC_015314.1 82353 84128 D KEGG: bbr:BB1126 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Butyryl-CoA dehydrogenase 82353..84128 Pseudonocardia dioxanivorans CB1190 10359433 YP_004336718.1 CDS Psed_6771 NC_015314.1 84171 84950 D KEGG: cti:RALTA_A1472 gluconate 5-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase 84171..84950 Pseudonocardia dioxanivorans CB1190 10359434 YP_004336719.1 CDS Psed_6772 NC_015314.1 84989 85774 D PFAM: Crotonase, core; KEGG: bbr:BB1123 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 84989..85774 Pseudonocardia dioxanivorans CB1190 10359435 YP_004336720.1 CDS Psed_6773 NC_015314.1 85797 87908 D KEGG: rme:Rmet_5110 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxybutyryl-CoA epimerase 85797..87908 Pseudonocardia dioxanivorans CB1190 10359436 YP_004336721.1 CDS Psed_6774 NC_015314.1 87993 89345 D PFAM: Major facilitator superfamily MFS-1; KEGG: rer:RER_51930 MFS transporter; major facilitator superfamily protein 87993..89345 Pseudonocardia dioxanivorans CB1190 10359437 YP_004336722.1 CDS Psed_6775 NC_015314.1 89342 89794 D KEGG: tcu:Tcur_1474 enoyl-CoA hydratase; PFAM: MaoC-like dehydratase; Enoyl-CoA hydratase 89342..89794 Pseudonocardia dioxanivorans CB1190 10359438 YP_004336723.1 CDS Psed_6776 NC_015314.1 89815 91722 D KEGG: bbr:BB1125 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase; Long-chain-fatty-acid--CoA ligase 89815..91722 Pseudonocardia dioxanivorans CB1190 10359439 YP_004336724.1 CDS Psed_6777 NC_015314.1 91839 93062 D TIGRFAM: Thiolase; KEGG: tbi:Tbis_3121 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 91839..93062 Pseudonocardia dioxanivorans CB1190 10359440 YP_004336725.1 CDS Psed_6778 NC_015314.1 93251 93541 D PFAM: Transposase IS3/IS911family; KEGG: mva:Mvan_2521 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 93251..93541 Pseudonocardia dioxanivorans CB1190 10359441 YP_004336726.1 CDS Psed_6779 NC_015314.1 93538 94428 D PFAM: Integrase, catalytic core; KEGG: mva:Mvan_2522 integrase catalytic subunit; integrase catalytic subunit 93538..94428 Pseudonocardia dioxanivorans CB1190 10359442 YP_004336727.1 CDS Psed_6780 NC_015314.1 94533 94709 D hypothetical protein 94533..94709 Pseudonocardia dioxanivorans CB1190 10359443 YP_004336728.1 CDS Psed_6782 NC_015314.1 95456 96754 R KEGG: tbi:Tbis_2163 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Hydroxyacid-oxoacid transhydrogenase complement(95456..96754) Pseudonocardia dioxanivorans CB1190 10359545 YP_004336729.1 CDS Psed_6784 NC_015314.1 98121 99746 R KEGG: mbt:JTY_3127 putative alkyldihydroxyacetonephosphate synthase; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Alkylglycerone-phosphate synthase complement(98121..99746) Pseudonocardia dioxanivorans CB1190 10359546 YP_004336730.1 CDS Psed_6786 NC_015314.1 101357 102130 R manually curated; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; KEGG: sen:SACE_3508 GntR family transcriptional regulator; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR domain-containing protein complement(101357..102130) Pseudonocardia dioxanivorans CB1190 10359547 YP_004336731.1 CDS Psed_6787 NC_015314.1 102237 103358 D manually curated; KEGG: cai:Caci_8461 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Formyl-CoA transferase 102237..103358 Pseudonocardia dioxanivorans CB1190 10359447 YP_004336732.1 CDS Psed_6788 NC_015314.1 103878 104399 D manually curated; KEGG: svi:Svir_18170 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase 103878..104399 Pseudonocardia dioxanivorans CB1190 10359448 YP_004336733.1 CDS Psed_6790 NC_015314.1 105441 105689 R KEGG: cai:Caci_3926 hypothetical protein; hypothetical protein complement(105441..105689) Pseudonocardia dioxanivorans CB1190 10359548 YP_004336734.1 CDS Psed_6791 NC_015314.1 105787 106713 R KEGG: art:Arth_0469 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(105787..106713) Pseudonocardia dioxanivorans CB1190 10359450 YP_004336735.1 CDS Psed_6792 NC_015314.1 107794 108801 D hypothetical protein 107794..108801 Pseudonocardia dioxanivorans CB1190 10359451 YP_004336736.1 CDS Psed_6793 NC_015314.1 109021 110250 R KEGG: rha:RHA1_ro08154 dehydratase/racemase; PFAM: CoA-transferase family III; Formyl-CoA transferase complement(109021..110250) Pseudonocardia dioxanivorans CB1190 10359452 YP_004336737.1 CDS Psed_6794 NC_015314.1 110247 111305 R PFAM: Crotonase, core; KEGG: mul:MUL_0536 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase complement(110247..111305) Pseudonocardia dioxanivorans CB1190 10359453 YP_004336738.1 CDS Psed_6799 NC_015314.1 114672 116084 R PFAM: Transposase, IS4-like; KEGG: mau:Micau_5192 transposase IS4 family protein; transposase IS4 family protein complement(114672..116084) Pseudonocardia dioxanivorans CB1190 10359552 YP_004336739.1 CDS Psed_6800 NC_015314.1 116326 117927 D KEGG: saq:Sare_3350 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Alkylglycerone-phosphate synthase 116326..117927 Pseudonocardia dioxanivorans CB1190 10359455 YP_004336740.1 CDS Psed_6802 NC_015314.1 118999 120012 R PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: fri:FraEuI1c_6427 integrase family protein; integrase family protein complement(118999..120012) Pseudonocardia dioxanivorans CB1190 10359553 YP_004336741.1 CDS Psed_6803 NC_015314.1 120009 120377 R hypothetical protein complement(120009..120377) Pseudonocardia dioxanivorans CB1190 10359457 YP_004336742.1 CDS Psed_6804 NC_015314.1 120370 121026 R hypothetical protein complement(120370..121026) Pseudonocardia dioxanivorans CB1190 10359458 YP_004336743.1 CDS Psed_6805 NC_015314.1 122512 122898 D hypothetical protein 122512..122898 Pseudonocardia dioxanivorans CB1190 10359459 YP_004336744.1 CDS Psed_6806 NC_015314.1 123284 123547 R hypothetical protein complement(123284..123547) Pseudonocardia dioxanivorans CB1190 10359460 YP_004336745.1 CDS Psed_6807 NC_015314.1 123861 124661 D hypothetical protein 123861..124661 Pseudonocardia dioxanivorans CB1190 10359461 YP_004336746.1 CDS Psed_6808 NC_015314.1 124693 125232 R KEGG: amd:AMED_0080 hypothetical protein; hypothetical protein complement(124693..125232) Pseudonocardia dioxanivorans CB1190 10359462 YP_004336747.1 CDS Psed_6809 NC_015314.1 125249 126571 R PFAM: Protein of unknown function DUF1173; KEGG: sna:Snas_5425 hypothetical protein; hypothetical protein complement(125249..126571) Pseudonocardia dioxanivorans CB1190 10359463 YP_004336748.1 CDS Psed_6810 NC_015314.1 126577 127470 R hypothetical protein complement(126577..127470) Pseudonocardia dioxanivorans CB1190 10359464 YP_004336749.1 CDS Psed_6811 NC_015314.1 127507 129594 R KEGG: kfl:Kfla_2184 type IV secretory pathway VirD4 protein-like protein; type IV secretory pathway VirD4 protein-like protein complement(127507..129594) Pseudonocardia dioxanivorans CB1190 10359465 YP_004336750.1 CDS Psed_6812 NC_015314.1 129591 130562 R KEGG: kfl:Kfla_0387 hypothetical protein; hypothetical protein complement(129591..130562) Pseudonocardia dioxanivorans CB1190 10359466 YP_004336751.1 CDS Psed_6813 NC_015314.1 130549 131004 R hypothetical protein complement(130549..131004) Pseudonocardia dioxanivorans CB1190 10359467 YP_004336752.1 CDS Psed_6814 NC_015314.1 131243 131560 D hypothetical protein 131243..131560 Pseudonocardia dioxanivorans CB1190 10359468 YP_004336753.1 CDS Psed_6815 NC_015314.1 131557 132138 D KEGG: tcu:Tcur_0423 hypothetical protein; hypothetical protein 131557..132138 Pseudonocardia dioxanivorans CB1190 10359469 YP_004336754.1 CDS Psed_6816 NC_015314.1 132158 133021 D KEGG: scb:SCAB_57051 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 132158..133021 Pseudonocardia dioxanivorans CB1190 10359470 YP_004336755.1 CDS Psed_6817 NC_015314.1 133112 133411 R hypothetical protein complement(133112..133411) Pseudonocardia dioxanivorans CB1190 10359471 YP_004336756.1 CDS Psed_6818 NC_015314.1 133411 133695 R hypothetical protein complement(133411..133695) Pseudonocardia dioxanivorans CB1190 10359472 YP_004336757.1 CDS Psed_6819 NC_015314.1 133816 134220 R hypothetical protein complement(133816..134220) Pseudonocardia dioxanivorans CB1190 10359473 YP_004336758.1 CDS Psed_6820 NC_015314.1 134642 135556 D KEGG: ami:Amir_1461 hypothetical protein; hypothetical protein 134642..135556 Pseudonocardia dioxanivorans CB1190 10359474 YP_004336759.1 CDS Psed_6821 NC_015314.1 136179 137309 D KEGG: cmi:pCM2_0003 hypothetical protein; hypothetical protein 136179..137309 Pseudonocardia dioxanivorans CB1190 10359475 YP_004336760.1 CDS Psed_6822 NC_015314.1 137306 138064 D hypothetical protein 137306..138064 Pseudonocardia dioxanivorans CB1190 10359476 YP_004336761.1 CDS Psed_6823 NC_015314.1 138159 138926 D hypothetical protein 138159..138926 Pseudonocardia dioxanivorans CB1190 10359477 YP_004336762.1 CDS Psed_6824 NC_015314.1 138923 139693 D hypothetical protein 138923..139693 Pseudonocardia dioxanivorans CB1190 10359478 YP_004336763.1 CDS Psed_6825 NC_015314.1 139997 141619 D KEGG: fre:Franean1_1320 nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; ParB domain-containing protein nuclease 139997..141619 Pseudonocardia dioxanivorans CB1190 10359479 YP_004336764.1 CDS Psed_6826 NC_015314.1 141694 142134 D hypothetical protein 141694..142134 Pseudonocardia dioxanivorans CB1190 10359480 YP_004336765.1 CDS Psed_6827 NC_015314.1 142334 142837 D hypothetical protein 142334..142837 Pseudonocardia dioxanivorans CB1190 10359481 YP_004336766.1 CDS Psed_6828 NC_015314.1 143084 143503 D KEGG: art:Arth_4330 hypothetical protein; hypothetical protein 143084..143503 Pseudonocardia dioxanivorans CB1190 10359482 YP_004336767.1 CDS Psed_6829 NC_015314.1 143564 144136 D KEGG: ach:Achl_3985 hypothetical protein; hypothetical protein 143564..144136 Pseudonocardia dioxanivorans CB1190 10359483 YP_004336768.1 CDS Psed_6830 NC_015314.1 144212 144835 D KEGG: pth:PTH_2463 hypothetical protein; hypothetical protein 144212..144835 Pseudonocardia dioxanivorans CB1190 10359484 YP_004336769.1 CDS Psed_6831 NC_015314.1 145154 145567 D PFAM: Primosome PriB/single-strand DNA-binding; KEGG: dge:Dgeo_0165 single-strand binding protein; single-strand binding protein/Primosomal replication protein n 145154..145567 Pseudonocardia dioxanivorans CB1190 10359485 YP_004336770.1 CDS Psed_6832 NC_015314.1 145687 146064 D PFAM: Transcription factor WhiB; KEGG: mil:ML5_3052 transcription factor WhiB; transcription factor WhiB 145687..146064 Pseudonocardia dioxanivorans CB1190 10359486 YP_004336771.1 CDS Psed_6833 NC_015314.1 146212 146802 D hypothetical protein 146212..146802 Pseudonocardia dioxanivorans CB1190 10359487 YP_004336772.1 CDS Psed_6834 NC_015314.1 146900 147484 D hypothetical protein 146900..147484 Pseudonocardia dioxanivorans CB1190 10359488 YP_004336773.1 CDS Psed_6835 NC_015314.1 147821 148951 D KEGG: stp:Strop_0062 hypothetical protein; PFAM: DNA primase/polymerase, bifunctional, N-terminal; SMART: DNA primase/polymerase, bifunctional, N-terminal; Bifunctional DNA primase/polymerase 147821..148951 Pseudonocardia dioxanivorans CB1190 10359489 YP_004336774.1 CDS Psed_6836 NC_015314.1 148948 149163 D hypothetical protein 148948..149163 Pseudonocardia dioxanivorans CB1190 10359490 YP_004336775.1 CDS Psed_6837 NC_015314.1 149412 149693 D hypothetical protein 149412..149693 Pseudonocardia dioxanivorans CB1190 10359491 YP_004336776.1 CDS Psed_6838 NC_015314.1 149653 150201 D hypothetical protein 149653..150201 Pseudonocardia dioxanivorans CB1190 10359492 YP_004336777.1 CDS Psed_6839 NC_015314.1 150426 151448 D KEGG: ace:Acel_1555 hypothetical protein; hypothetical protein 150426..151448 Pseudonocardia dioxanivorans CB1190 10359493 YP_004336778.1 CDS Psed_6840 NC_015314.1 151872 152108 D hypothetical protein 151872..152108 Pseudonocardia dioxanivorans CB1190 10359494 YP_004336779.1 CDS Psed_6841 NC_015314.1 152200 152715 D hypothetical protein 152200..152715 Pseudonocardia dioxanivorans CB1190 10359495 YP_004336780.1 CDS Psed_6842 NC_015314.1 152814 153788 D PFAM: DNA recombination-mediator protein A; KEGG: svi:Svir_09850 DNA protecting protein DprA; SMF family protein 152814..153788 Pseudonocardia dioxanivorans CB1190 10359496 YP_004336781.1 CDS Psed_6843 NC_015314.1 153855 154460 D hypothetical protein 153855..154460 Pseudonocardia dioxanivorans CB1190 10359497 YP_004336782.1 CDS Psed_6844 NC_015314.1 155007 155159 D hypothetical protein 155007..155159 Pseudonocardia dioxanivorans CB1190 10359498 YP_004336783.1 CDS Psed_6845 NC_015314.1 155248 155397 D hypothetical protein 155248..155397 Pseudonocardia dioxanivorans CB1190 10359499 YP_004336784.1 CDS Psed_6846 NC_015314.1 155394 155747 D hypothetical protein 155394..155747 Pseudonocardia dioxanivorans CB1190 10359500 YP_004336785.1 CDS Psed_6847 NC_015314.1 155744 156088 D hypothetical protein 155744..156088 Pseudonocardia dioxanivorans CB1190 10359501 YP_004336786.1 CDS Psed_6848 NC_015314.1 156396 157307 D hypothetical protein 156396..157307 Pseudonocardia dioxanivorans CB1190 10359502 YP_004336787.1 CDS Psed_6849 NC_015314.1 157568 158080 R KEGG: mno:Mnod_4618 translation initiation factor IF-2; translation initiation factor IF-2 complement(157568..158080) Pseudonocardia dioxanivorans CB1190 10359503 YP_004336788.1 CDS Psed_6850 NC_015314.1 158315 158905 R KEGG: art:Arth_3833 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein complement(158315..158905) Pseudonocardia dioxanivorans CB1190 10359504 YP_004336789.1 CDS Psed_6851 NC_015314.1 159004 160458 R PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Multicopper oxidase, type 2; KEGG: msp:Mspyr1_54900 multicopper oxidase; multicopper oxidase type 3 complement(159004..160458) Pseudonocardia dioxanivorans CB1190 10359505 YP_004336790.1 CDS Psed_6852 NC_015314.1 160455 160685 R PFAM: Protein of unknown function DUF2078, membrane; KEGG: msp:Mspyr1_54890 membrane protein (DUF2078); hypothetical protein complement(160455..160685) Pseudonocardia dioxanivorans CB1190 10359506 YP_004336791.1 CDS Psed_6853 NC_015314.1 160764 161159 R PFAM: Domain of unknown function DUF302; KEGG: sco:SCO0165 hypothetical protein; hypothetical protein complement(160764..161159) Pseudonocardia dioxanivorans CB1190 10359507 YP_004336792.1 CDS Psed_6854 NC_015314.1 161210 162004 R PFAM: Protein of unknown function DUF81; KEGG: sen:SACE_2431 membrane permease protein; hypothetical protein complement(161210..162004) Pseudonocardia dioxanivorans CB1190 10359508 YP_004336793.1 CDS Psed_6855 NC_015314.1 162039 163442 R KEGG: mau:Micau_2767 rhodanese domain-containing protein; PFAM: Beta-lactamase-like; SMART: Rhodanese-like; Beta-lactamase-like; beta-lactamase domain-containing protein complement(162039..163442) Pseudonocardia dioxanivorans CB1190 10359509 YP_004336794.1 CDS Psed_6856 NC_015314.1 163486 163800 R KEGG: rop:ROP_00410 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein complement(163486..163800) Pseudonocardia dioxanivorans CB1190 10359510 YP_004336795.1 CDS Psed_6857 NC_015314.1 163907 164176 R PFAM: Protein of unknown function DUF156; KEGG: sen:SACE_5796 hypothetical protein; hypothetical protein complement(163907..164176) Pseudonocardia dioxanivorans CB1190 10359511 YP_004336796.1 CDS Psed_6858 NC_015314.1 164290 165567 D PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein; transposase mutator type 164290..165567 Pseudonocardia dioxanivorans CB1190 10359512 YP_004336797.1 CDS Psed_6859 NC_015314.1 165614 166663 R PFAM: Integrase, catalytic core; KEGG: nml:Namu_3083 integrase catalytic subunit; integrase catalytic subunit complement(165614..166663) Pseudonocardia dioxanivorans CB1190 10359513 YP_004336798.1 CDS Psed_6860 NC_015314.1 166788 167390 D KEGG: swd:Swoo_0201 signal recognition particle-docking protein FtsY; hypothetical protein 166788..167390 Pseudonocardia dioxanivorans CB1190 10359514 YP_004336799.1 CDS Psed_6861 NC_015314.1 167391 167891 R hypothetical protein complement(167391..167891) Pseudonocardia dioxanivorans CB1190 10359515 YP_004336800.1 CDS Psed_6862 NC_015314.1 168187 169638 R HAMAP: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: sgr:SGR_785 putative NADH dehydrogenase chain N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NAD(P)H-quinone oxidoreductase subunit 2 complement(168187..169638) Pseudonocardia dioxanivorans CB1190 10359516 YP_004336801.1 CDS Psed_6863 NC_015314.1 169635 171155 R TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: sgr:SGR_786 putative NADH dehydrogenase chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M complement(169635..171155) Pseudonocardia dioxanivorans CB1190 10359517 YP_004336802.1 CDS Psed_6864 NC_015314.1 171186 173036 R KEGG: sgr:SGR_787 putative NADH dehydrogenase chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) complement(171186..173036) Pseudonocardia dioxanivorans CB1190 10359518 YP_004336803.1 CDS Psed_6865 NC_015314.1 173045 173350 R KEGG: sro:Sros_3680 NADH-ubiquinone oxidoreductase, chain 4L; HAMAP: NADH-ubiquinone oxidoreductase chain 4L/K; PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; NAD(P)H-quinone oxidoreductase subunit 4L complement(173045..173350) Pseudonocardia dioxanivorans CB1190 10359519 YP_004336804.1 CDS Psed_6866 NC_015314.1 173347 173904 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: sgr:SGR_789 putative NADH dehydrogenase chain J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(173347..173904) Pseudonocardia dioxanivorans CB1190 10359520 YP_004336805.1 CDS Psed_6867 NC_015314.1 173922 174860 R KEGG: sgr:SGR_790 putative NADH dehydrogenase chain H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H; NADH dehydrogenase (quinone) complement(173922..174860) Pseudonocardia dioxanivorans CB1190 10359521 YP_004336806.1 CDS Psed_6868 NC_015314.1 174871 176205 R KEGG: sro:Sros_3683 hypothetical protein; hypothetical protein complement(174871..176205) Pseudonocardia dioxanivorans CB1190 10359522 YP_004336807.1 CDS Psed_6869 NC_015314.1 176196 176546 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: sgr:SGR_792 putative NADH dehydrogenase chain A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 complement(176196..176546) Pseudonocardia dioxanivorans CB1190 10359523 YP_004336808.1 CDS Psed_6870 NC_015314.1 176739 177401 R PFAM: Domain of unknown function DUF305; KEGG: nfa:nfa38100 hypothetical protein; hypothetical protein complement(176739..177401) Pseudonocardia dioxanivorans CB1190 10359524 YP_004336809.1 CDS Psed_6871 NC_015314.1 177470 177967 R hypothetical protein complement(177470..177967) Pseudonocardia dioxanivorans CB1190 10359525 YP_004336810.1 CDS Psed_6872 NC_015314.1 178094 179248 R KEGG: amd:AMED_8813 high-affinity nickel-transport protein; TIGRFAM: Nickel/cobalt transporter, high-affinity, bacteria; PFAM: Nickel/cobalt transporter, high-affinity; high-affinity nickel-transporter complement(178094..179248) Pseudonocardia dioxanivorans CB1190 10359526 YP_004336811.1 CDS Psed_6873 NC_015314.1 179508 179789 D PFAM: Protein of unknown function DUF156; KEGG: mkm:Mkms_0157 hypothetical protein; hypothetical protein 179508..179789 Pseudonocardia dioxanivorans CB1190 10359527 YP_004336812.1 CDS Psed_6874 NC_015314.1 179945 180154 D KEGG: fre:Franean1_5745 heavy metal transport/detoxification protein; TIGRFAM: Copper ion-binding; PFAM: Heavy metal transport/detoxification protein; copper ion binding protein 179945..180154 Pseudonocardia dioxanivorans CB1190 10359528 YP_004336813.1 CDS Psed_6875 NC_015314.1 180214 181218 D KEGG: sen:SACE_4147 secreted protein; secreted protein 180214..181218 Pseudonocardia dioxanivorans CB1190 10359529 YP_004336814.1 CDS Psed_6876 NC_015314.1 181218 183593 D TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: fre:Franean1_5747 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 181218..183593 Pseudonocardia dioxanivorans CB1190 10359530 YP_004336815.1 CDS Psed_6878 NC_015314.1 184857 185528 D hypothetical protein 184857..185528 Pseudonocardia dioxanivorans CB1190 10359554 YP_004336816.1 CDS Psed_6879 NC_015314.1 185764 186966 R KEGG: srt:Srot_2293 S-adenosylmethionine synthetase; manually curated; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; HAMAP: S-adenosylmethionine synthetase; S-adenosylmethionine synthase complement(185764..186966) Pseudonocardia dioxanivorans CB1190 10359532 YP_004336817.1 CDS Psed_6880 NC_015314.1 187855 188391 D hypothetical protein 187855..188391 Pseudonocardia dioxanivorans CB1190 10359533 YP_004336818.1 CDS Psed_6881 NC_015314.1 188500 189582 D PFAM: Methyltransferase type 11; KEGG: sfu:Sfum_3434 methyltransferase type 11; Methyltransferase type 11 188500..189582 Pseudonocardia dioxanivorans CB1190 10359534 YP_004336819.1 CDS Psed_6882 NC_015314.1 190046 190630 R PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: fri:FraEuI1c_5602 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic complement(190046..190630) Pseudonocardia dioxanivorans CB1190 10359535 YP_004991158.1 CDS Psed_6903 NC_016600.1 <1 1150 R KEGG: nfa:pnf11430 hypothetical protein; hypothetical protein complement(<1..1150) Pseudonocardia dioxanivorans CB1190 11633322 YP_004991159.1 CDS Psed_6904 NC_016600.1 1143 1580 R hypothetical protein complement(1143..1580) Pseudonocardia dioxanivorans CB1190 11633323 YP_004991160.1 CDS Psed_6905 NC_016600.1 1849 2127 R hypothetical protein complement(1849..2127) Pseudonocardia dioxanivorans CB1190 11633324 YP_004991161.1 CDS Psed_6906 NC_016600.1 2140 2640 R KEGG: nfa:pnf11480 hypothetical protein; hypothetical protein complement(2140..2640) Pseudonocardia dioxanivorans CB1190 11633325 YP_004991162.1 CDS Psed_6907 NC_016600.1 3391 3684 R hypothetical protein complement(3391..3684) Pseudonocardia dioxanivorans CB1190 11633326 YP_004991163.1 CDS Psed_6908 NC_016600.1 3740 4066 R hypothetical protein complement(3740..4066) Pseudonocardia dioxanivorans CB1190 11633327 YP_004991164.1 CDS Psed_6909 NC_016600.1 4071 5462 R KEGG: lcb:LCABL_26070 possible cell surface protein; hypothetical protein complement(4071..5462) Pseudonocardia dioxanivorans CB1190 11633328 YP_004991165.1 CDS Psed_6910 NC_016600.1 5722 6168 D PFAM: Helix-turn-helix type 3; KEGG: tpr:Tpau_4134 putative DNA-binding protein; helix-turn-helix domain-containing protein 5722..6168 Pseudonocardia dioxanivorans CB1190 11633329 YP_004991166.1 CDS Psed_6911 NC_016600.1 6326 6667 D hypothetical protein 6326..6667 Pseudonocardia dioxanivorans CB1190 11633330 YP_004991167.1 CDS Psed_6912 NC_016600.1 6860 7411 D manually curated; KEGG: amd:AMED_0903 hypothetical protein; hypothetical protein 6860..7411 Pseudonocardia dioxanivorans CB1190 11633331 YP_004991168.1 CDS Psed_6913 NC_016600.1 7408 8580 D KEGG: amd:AMED_7102 hypothetical protein; hypothetical protein 7408..8580 Pseudonocardia dioxanivorans CB1190 11633332 YP_004991169.1 CDS Psed_6914 NC_016600.1 8577 9788 D PFAM: Amidohydrolase 1; KEGG: amd:AMED_0901 amidohydrolase; amidohydrolase 8577..9788 Pseudonocardia dioxanivorans CB1190 11633286 YP_004991170.1 CDS Psed_6915 NC_016600.1 9945 10787 R KEGG: tcu:Tcur_0281 hypothetical protein; hypothetical protein complement(9945..10787) Pseudonocardia dioxanivorans CB1190 11633287 YP_004991171.1 CDS Psed_6916 NC_016600.1 10945 12384 R KEGG: scl:sce6360 hypothetical protein; hypothetical protein complement(10945..12384) Pseudonocardia dioxanivorans CB1190 11633288 YP_004991172.1 CDS Psed_6918 NC_016600.1 12753 12980 D KEGG: nda:Ndas_1294 helix-turn-helix domain protein; helix-turn-helix domain-containing protein 12753..12980 Pseudonocardia dioxanivorans CB1190 11633290 YP_004991173.1 CDS Psed_6920 NC_016600.1 13697 15223 R KEGG: sen:SACE_3387 bile acid-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase complement(13697..15223) Pseudonocardia dioxanivorans CB1190 11633292 YP_004991174.1 CDS Psed_6921 NC_016600.1 15220 16041 R PFAM: Xylose isomerase, TIM barrel domain; KEGG: sme:SM_b20534 hypothetical protein; xylose isomerase domain-containing protein complement(15220..16041) Pseudonocardia dioxanivorans CB1190 11633293 YP_004991175.1 CDS Psed_6922 NC_016600.1 16045 17079 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: rha:RHA1_ro09044 ABC peptide transporter, ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; oligopeptide/dipeptide ABC transporter ATPase complement(16045..17079) Pseudonocardia dioxanivorans CB1190 11633294 YP_004991176.1 CDS Psed_6923 NC_016600.1 17079 18209 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: rha:RHA1_ro09045 ABC peptide transporter, ATP-binding component; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; oligopeptide/dipeptide ABC transporter ATPase complement(17079..18209) Pseudonocardia dioxanivorans CB1190 11633295 YP_004991177.1 CDS Psed_6924 NC_016600.1 18224 19801 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3398 extracellular solute-binding protein; ABC transporter periplasmic protein complement(18224..19801) Pseudonocardia dioxanivorans CB1190 11633296 YP_004991178.1 CDS Psed_6925 NC_016600.1 19845 20735 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro09046 ABC peptide transporter, permease component; ABC transporter complement(19845..20735) Pseudonocardia dioxanivorans CB1190 11633297 YP_004991179.1 CDS Psed_6926 NC_016600.1 20732 21685 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro09047 ABC peptide transporter, permease component; ABC transporter complement(20732..21685) Pseudonocardia dioxanivorans CB1190 11633298 YP_004991180.1 CDS Psed_6927 NC_016600.1 21787 23133 R PFAM: Amidohydrolase 2; KEGG: fri:FraEuI1c_1470 amidohydrolase 2; amidohydrolase 2 complement(21787..23133) Pseudonocardia dioxanivorans CB1190 11633299 YP_004991181.1 CDS Psed_6928 NC_016600.1 23435 24469 D KEGG: ami:Amir_5343 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; LacI family transcriptional regulator 23435..24469 Pseudonocardia dioxanivorans CB1190 11633300 YP_004991182.1 CDS Psed_6929 NC_016600.1 24855 26003 D PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: ami:Amir_4009 oxidoreductase domain protein; oxidoreductase domain-containing protein 24855..26003 Pseudonocardia dioxanivorans CB1190 11633301 YP_004991183.1 CDS Psed_6930 NC_016600.1 26015 27163 D PFAM: Protein of unknown function DUF993; KEGG: ami:Amir_4008 hypothetical protein; hypothetical protein 26015..27163 Pseudonocardia dioxanivorans CB1190 11633302 YP_004991184.1 CDS Psed_6931 NC_016600.1 27160 28005 D PFAM: Xylose isomerase, TIM barrel domain; KEGG: mau:Micau_3038 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 27160..28005 Pseudonocardia dioxanivorans CB1190 11633303 YP_004991185.1 CDS Psed_6932 NC_016600.1 28007 29107 D TIGRFAM: Glycerate kinase; KEGG: fra:Francci3_4457 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase 28007..29107 Pseudonocardia dioxanivorans CB1190 11633304 YP_004991186.1 CDS Psed_6934 NC_016600.1 29933 30499 D PFAM: Uncharacterised protein family YphA; KEGG: amd:AMED_7198 hypothetical protein; DoxX family protein 29933..30499 Pseudonocardia dioxanivorans CB1190 11633306 YP_004991187.1 CDS Psed_6935 NC_016600.1 30569 31663 D PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: swi:Swit_4311 extradiol ring-cleavage dioxygenase III subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 30569..31663 Pseudonocardia dioxanivorans CB1190 11633307 YP_004991188.1 CDS Psed_6937 NC_016600.1 32225 33484 R KEGG: svi:Svir_14840 transcriptional regulator/sugar kinase; PFAM: ROK; glucokinase complement(32225..33484) Pseudonocardia dioxanivorans CB1190 11633309 YP_004991189.1 CDS Psed_6938 NC_016600.1 33543 33743 R KEGG: rha:RHA1_ro10212 phthalate 3,4-dioxygenase ferredoxin subunit; phthalate 3,4-dioxygenase ferredoxin subunit complement(33543..33743) Pseudonocardia dioxanivorans CB1190 11633310 YP_004991190.1 CDS Psed_6939 NC_016600.1 33740 34123 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll7609 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) iron-sulfur domain-containing protein complement(33740..34123) Pseudonocardia dioxanivorans CB1190 11633311 YP_004991191.1 CDS Psed_6940 NC_016600.1 34120 35205 R PFAM: Amidohydrolase 2; KEGG: oca:OCAR_6791 amidohydrolase family; amidohydrolase 2 complement(34120..35205) Pseudonocardia dioxanivorans CB1190 11633312 YP_004991192.1 CDS Psed_6941 NC_016600.1 35243 36607 R PFAM: Major facilitator superfamily MFS-1; KEGG: rxy:Rxyl_2344 major facilitator transporter; major facilitator superfamily protein complement(35243..36607) Pseudonocardia dioxanivorans CB1190 11633313 YP_004991193.1 CDS Psed_6942 NC_016600.1 37095 38132 D PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: art:Arth_1913 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 37095..38132 Pseudonocardia dioxanivorans CB1190 11633314 YP_004991194.1 CDS Psed_6943 NC_016600.1 38129 39049 D PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: cai:Caci_5338 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 38129..39049 Pseudonocardia dioxanivorans CB1190 11633315 YP_004991195.1 CDS Psed_6944 NC_016600.1 39060 39923 D PFAM: Xylose isomerase, TIM barrel domain; KEGG: ttr:Tter_2313 oxidoreductase domain protein; xylose isomerase domain-containing protein 39060..39923 Pseudonocardia dioxanivorans CB1190 11633316 YP_004991196.1 CDS Psed_6945 NC_016600.1 40304 40504 D PFAM: Ferredoxin soy-like; KEGG: rha:RHA1_ro10212 phthalate 3,4-dioxygenase ferredoxin subunit; hypothetical protein 40304..40504 Pseudonocardia dioxanivorans CB1190 11633317 YP_004991197.1 CDS Psed_6946 NC_016600.1 40501 41694 D KEGG: kfl:Kfla_4098 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 40501..41694 Pseudonocardia dioxanivorans CB1190 11633318 YP_004991198.1 CDS Psed_6947 NC_016600.1 41905 42813 R KEGG: ate:Athe_2312 hypothetical protein; hypothetical protein complement(41905..42813) Pseudonocardia dioxanivorans CB1190 11633319 YP_004991199.1 CDS Psed_6948 NC_016600.1 43430 44725 D KEGG: nml:Namu_3667 transposase mutator type; manually curated; PFAM: Transposase, mutator type; transposase mutator type 43430..44725 Pseudonocardia dioxanivorans CB1190 11633320 YP_004991200.1 CDS Psed_6949 NC_016600.1 44719 45258 R hypothetical protein complement(44719..45258) Pseudonocardia dioxanivorans CB1190 11633321 YP_004991201.1 CDS Psed_6951 NC_016601.1 751 1980 D KEGG: mbt:JTY_3207 hypothetical protein; hypothetical protein 751..1980 Pseudonocardia dioxanivorans CB1190 11633386 YP_004991202.1 CDS Psed_6952 NC_016601.1 1890 3716 R PFAM: Transglycosylase-like; KEGG: yli:YALI0C11165g YALI0C11165p; Transglycosylase-like domain protein complement(1890..3716) Pseudonocardia dioxanivorans CB1190 11633387 YP_004991203.1 CDS Psed_6953 NC_016601.1 3830 5116 R KEGG: mva:Mvan_5243 hypothetical protein; hypothetical protein complement(3830..5116) Pseudonocardia dioxanivorans CB1190 11633388 YP_004991204.1 CDS Psed_6954 NC_016601.1 5122 6453 R KEGG: tcu:Tcur_0128 chromosome partitioning ATPase; chromosome partitioning ATPase complement(5122..6453) Pseudonocardia dioxanivorans CB1190 11633389 YP_004991205.1 CDS Psed_6955 NC_016601.1 6450 6911 R KEGG: kfl:Kfla_2555 hypothetical protein; hypothetical protein complement(6450..6911) Pseudonocardia dioxanivorans CB1190 11633390 YP_004991206.1 CDS Psed_6956 NC_016601.1 7163 7810 D KEGG: ami:Amir_0167 PE-PGRS family protein; hypothetical protein 7163..7810 Pseudonocardia dioxanivorans CB1190 11633391 YP_004991207.1 CDS Psed_6957 NC_016601.1 7815 8285 D PFAM: Helix-turn-helix type 3; KEGG: amd:AMED_1799 hypothetical protein; helix-turn-helix domain protein 7815..8285 Pseudonocardia dioxanivorans CB1190 11633392 YP_004991208.1 CDS Psed_6958 NC_016601.1 8798 9454 D KEGG: bcv:Bcav_1798 hypothetical protein; hypothetical protein 8798..9454 Pseudonocardia dioxanivorans CB1190 11633393 YP_004991209.1 CDS Psed_6959 NC_016601.1 9673 10662 R PFAM: NLP/P60; KEGG: mil:ML5_6031 nlp/p60 protein; NLP/P60 protein complement(9673..10662) Pseudonocardia dioxanivorans CB1190 11633394 YP_004991210.1 CDS Psed_6960 NC_016601.1 10789 11679 D KEGG: kfl:Kfla_2197 bifunctional DNA primase/polymerase; PFAM: DNA primase/polymerase, bifunctional, N-terminal; SMART: DNA primase/polymerase, bifunctional, N-terminal; Bifunctional DNA primase/polymerase 10789..11679 Pseudonocardia dioxanivorans CB1190 11633395 YP_004991211.1 CDS Psed_6961 NC_016601.1 11802 12077 D hypothetical protein 11802..12077 Pseudonocardia dioxanivorans CB1190 11633334 YP_004991212.1 CDS Psed_6962 NC_016601.1 12235 13842 D KEGG: tbi:Tbis_3041 hypothetical protein; hypothetical protein 12235..13842 Pseudonocardia dioxanivorans CB1190 11633335 YP_004991213.1 CDS Psed_6963 NC_016601.1 13839 15215 D TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: svi:Svir_39470 primary replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase 13839..15215 Pseudonocardia dioxanivorans CB1190 11633336 YP_004991214.1 CDS Psed_6964 NC_016601.1 15525 16781 D PFAM: Transposase, mutator type; KEGG: mbt:JTY_3135 putative transposase; transposase mutator type 15525..16781 Pseudonocardia dioxanivorans CB1190 11633337 YP_004991215.1 CDS Psed_6965 NC_016601.1 16993 17142 D hypothetical protein 16993..17142 Pseudonocardia dioxanivorans CB1190 11633338 YP_004991216.1 CDS Psed_6966 NC_016601.1 17139 18434 D PFAM: Zeta toxin; KEGG: fra:Francci3_2358 zeta toxin; Zeta toxin family protein 17139..18434 Pseudonocardia dioxanivorans CB1190 11633339 YP_004991217.1 CDS Psed_6967 NC_016601.1 18501 19541 D PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: fri:FraEuI1c_6427 integrase family protein; integrase family protein 18501..19541 Pseudonocardia dioxanivorans CB1190 11633340 YP_004991218.1 CDS Psed_6968 NC_016601.1 19741 21036 D PFAM: Transposase, mutator type; KEGG: nml:Namu_3667 transposase mutator type; transposase mutator type 19741..21036 Pseudonocardia dioxanivorans CB1190 11633341 YP_004991219.1 CDS Psed_6970 NC_016601.1 22650 25577 R manually curated; KEGG: sen:SACE_3788 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Cysteine-rich domain; D-lactate dehydrogenase (cytochrome) complement(22650..25577) Pseudonocardia dioxanivorans CB1190 11633343 YP_004991220.1 CDS Psed_6971 NC_016601.1 25781 27070 R KEGG: gob:Gobs_1823 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Hydroxyacid-oxoacid transhydrogenase complement(25781..27070) Pseudonocardia dioxanivorans CB1190 11633344 YP_004991221.1 CDS Psed_6972 NC_016601.1 27413 28144 R manually curated; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; KEGG: svi:Svir_08590 transcriptional regulator; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(27413..28144) Pseudonocardia dioxanivorans CB1190 11633345 YP_004991222.1 CDS Psed_6973 NC_016601.1 28284 28382 R hypothetical protein complement(28284..28382) Pseudonocardia dioxanivorans CB1190 11633346 YP_004991223.1 CDS Psed_6974 NC_016601.1 28996 29319 D KEGG: reu:Reut_B3850 ethyl tert-butyl ether degradation EthD; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; Ethyl tert-butyl ether degradation EthD 28996..29319 Pseudonocardia dioxanivorans CB1190 11633347 YP_004991224.1 CDS Psed_6975 NC_016601.1 29472 30974 D KEGG: min:Minf_1839 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Betaine-aldehyde dehydrogenase 29472..30974 Pseudonocardia dioxanivorans CB1190 11633348 YP_004991225.1 CDS Psed_6977 NC_016601.1 32884 33972 D KEGG: fra:Francci3_2519 oxidoreductase FAD-binding region; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin--NAD(+) reductase 32884..33972 Pseudonocardia dioxanivorans CB1190 11633350 YP_004991226.1 CDS Psed_6978 NC_016601.1 34003 35043 D PFAM: Methane/phenol/toluene hydroxylase; KEGG: nca:Noca_4809 methane monooxygenase; methane/phenol/toluene hydroxylase 34003..35043 Pseudonocardia dioxanivorans CB1190 11633351 YP_004991227.1 CDS Psed_6979 NC_016601.1 35043 35396 D PFAM: Monooxygenase component MmoB/DmpM; KEGG: gbr:Gbro_3554 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 35043..35396 Pseudonocardia dioxanivorans CB1190 11633352 YP_004991228.1 CDS Psed_6980 NC_016601.1 35635 36312 D manually curated; KEGG: fra:Francci3_1236 hypothetical protein; hypothetical protein 35635..36312 Pseudonocardia dioxanivorans CB1190 11633353 YP_004991229.1 CDS Psed_6981 NC_016601.1 36566 38005 D KEGG: cai:Caci_7826 aldehyde dehydrogenase; manually curated; PFAM: Aldehyde dehydrogenase domain; Aldehyde Dehydrogenase 36566..38005 Pseudonocardia dioxanivorans CB1190 11633354 YP_004991230.1 CDS Psed_6982 NC_016601.1 38268 39509 D KEGG: mkm:Mkms_4453 Mn2+/Fe2+ transporter; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; Mn2+/Fe2+ transporter, NRAMP family 38268..39509 Pseudonocardia dioxanivorans CB1190 11633355 YP_004991231.1 CDS Psed_6985 NC_016601.1 42196 43284 D PFAM: Transposase, IS116/IS110/IS902; KEGG: sma:SAV_634 IS110 family transposase; transposase IS116/IS110/IS902 family protein 42196..43284 Pseudonocardia dioxanivorans CB1190 11633358 YP_004991232.1 CDS Psed_6987 NC_016601.1 43628 45040 D KEGG: mau:Micau_6070 integrase catalytic domain-containing protein; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic region 43628..45040 Pseudonocardia dioxanivorans CB1190 11633360 YP_004991233.1 CDS Psed_6988 NC_016601.1 45037 45810 D KEGG: sco:SCO6394 IS element ATP binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain protein ATP-binding protein 45037..45810 Pseudonocardia dioxanivorans CB1190 11633361 YP_004991234.1 CDS Psed_6990 NC_016601.1 46549 47742 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: msp:Mspyr1_01360 transposase; transposase IS116/IS110/IS902 family protein 46549..47742 Pseudonocardia dioxanivorans CB1190 11633363 YP_004991235.1 CDS Psed_6991 NC_016601.1 47964 49202 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: mau:Micau_4072 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 47964..49202 Pseudonocardia dioxanivorans CB1190 11633364 YP_004991236.1 CDS Psed_6992 NC_016601.1 49419 50561 D KEGG: aau:AAur_pTC10275 hypothetical protein; hypothetical protein 49419..50561 Pseudonocardia dioxanivorans CB1190 11633365 YP_004991237.1 CDS Psed_6993 NC_016601.1 50973 52073 R TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nfa:pnf120 putative plasmid partitioning protein; SMART: ParB-like nuclease; parB-like partition protein complement(50973..52073) Pseudonocardia dioxanivorans CB1190 11633366 YP_004991238.1 CDS Psed_6994 NC_016601.1 52079 53080 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: svi:Svir_22160 chromosome partitioning ATPase; Cobyrinic acid ac-diamide synthase complement(52079..53080) Pseudonocardia dioxanivorans CB1190 11633367 YP_004991239.1 CDS Psed_6995 NC_016601.1 53087 53386 R hypothetical protein complement(53087..53386) Pseudonocardia dioxanivorans CB1190 11633368 YP_004991240.1 CDS Psed_6996 NC_016601.1 53668 54369 D KEGG: ace:Acel_1025 hypothetical protein; hypothetical protein 53668..54369 Pseudonocardia dioxanivorans CB1190 11633369 YP_004991241.1 CDS Psed_6997 NC_016601.1 55252 55764 D hypothetical protein 55252..55764 Pseudonocardia dioxanivorans CB1190 11633370 YP_004991242.1 CDS Psed_6998 NC_016601.1 56389 56592 D hypothetical protein 56389..56592 Pseudonocardia dioxanivorans CB1190 11633371 YP_004991243.1 CDS Psed_6999 NC_016601.1 57445 57828 D hypothetical protein 57445..57828 Pseudonocardia dioxanivorans CB1190 11633372 YP_004991244.1 CDS Psed_7000 NC_016601.1 57825 58394 D KEGG: fal:FRAAL6348 hypothetical protein; hypothetical protein 57825..58394 Pseudonocardia dioxanivorans CB1190 11633373 YP_004991245.1 CDS Psed_7001 NC_016601.1 58384 59253 D manually curated; PFAM: Helix-turn-helix type 3; KEGG: nda:Ndas_2376 helix-turn-helix domain protein; SMART: Helix-turn-helix type 3; helix-turn-helix domain protein 58384..59253 Pseudonocardia dioxanivorans CB1190 11633374 YP_004991246.1 CDS Psed_7002 NC_016601.1 59429 59713 D PFAM: Transcription factor WhiB; KEGG: pak:HMPREF0675_4328 transcription factor WhiB; transcription factor WhiB 59429..59713 Pseudonocardia dioxanivorans CB1190 11633375 YP_004991247.1 CDS Psed_7003 NC_016601.1 59710 60798 D KEGG: nfa:nfa7460 hypothetical protein; hypothetical protein 59710..60798 Pseudonocardia dioxanivorans CB1190 11633376 YP_004991248.1 CDS Psed_7004 NC_016601.1 60882 61097 D hypothetical protein 60882..61097 Pseudonocardia dioxanivorans CB1190 11633377 YP_004991249.1 CDS Psed_7005 NC_016601.1 61094 61393 D hypothetical protein 61094..61393 Pseudonocardia dioxanivorans CB1190 11633378 YP_004991250.1 CDS Psed_7006 NC_016601.1 61390 61926 D KEGG: sna:Snas_6255 hypothetical protein; hypothetical protein 61390..61926 Pseudonocardia dioxanivorans CB1190 11633379 YP_004991251.1 CDS Psed_7007 NC_016601.1 61958 62398 D hypothetical protein 61958..62398 Pseudonocardia dioxanivorans CB1190 11633380 YP_004991252.1 CDS Psed_7008 NC_016601.1 62404 63441 D hypothetical protein 62404..63441 Pseudonocardia dioxanivorans CB1190 11633381 YP_004991253.1 CDS Psed_7009 NC_016601.1 63619 65775 D KEGG: fri:FraEuI1c_5828 hypothetical protein; hypothetical protein 63619..65775 Pseudonocardia dioxanivorans CB1190 11633382 YP_004991254.1 CDS Psed_7010 NC_016601.1 65895 66302 D PFAM: Transcription factor WhiB; KEGG: sen:SACE_6464 WhiB family transcriptional regulator; transcription factor WhiB 65895..66302 Pseudonocardia dioxanivorans CB1190 11633383 YP_004991255.1 CDS Psed_7011 NC_016601.1 66299 66718 D PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: fri:FraEuI1c_2318 sporulation and cell division protein SsgA; sporulation and cell division protein SsgA 66299..66718 Pseudonocardia dioxanivorans CB1190 11633384 Psed_R0001 tRNA Psed_R0001 NC_015312.1 12062 12135 D tRNA-Ile 12062..12135 Pseudonocardia dioxanivorans CB1190 10361809 Psed_R0002 tRNA Psed_R0002 NC_015312.1 12335 12410 D tRNA-Ala 12335..12410 Pseudonocardia dioxanivorans CB1190 10361811 Psed_R0003 tRNA Psed_R0003 NC_015312.1 135459 135544 D tRNA-Leu 135459..135544 Pseudonocardia dioxanivorans CB1190 10361924 Psed_R0004 tRNA Psed_R0004 NC_015312.1 232595 232682 D tRNA-Ser 232595..232682 Pseudonocardia dioxanivorans CB1190 10362018 Psed_R0005 tRNA Psed_R0005 NC_015312.1 256404 256493 D tRNA-Ser 256404..256493 Pseudonocardia dioxanivorans CB1190 10362042 Psed_R0006 tRNA Psed_R0006 NC_015312.1 256544 256619 D tRNA-Arg 256544..256619 Pseudonocardia dioxanivorans CB1190 10362043 Psed_R0007 tRNA Psed_R0007 NC_015312.1 380691 380780 D tRNA-Ser 380691..380780 Pseudonocardia dioxanivorans CB1190 10362144 Psed_R0008 tRNA Psed_R0008 NC_015312.1 390705 390792 R tRNA-Ser complement(390705..390792) Pseudonocardia dioxanivorans CB1190 10362156 Psed_R0010 tRNA Psed_R0010 NC_015312.1 429171 429244 R tRNA-Pro complement(429171..429244) Pseudonocardia dioxanivorans CB1190 10362201 Psed_R0011 tRNA Psed_R0011 NC_015312.1 522711 522786 R tRNA-Lys complement(522711..522786) Pseudonocardia dioxanivorans CB1190 10362292 Psed_R0012 tRNA Psed_R0012 NC_015312.1 533277 533349 R tRNA-Gly complement(533277..533349) Pseudonocardia dioxanivorans CB1190 10362305 Psed_R0016 tRNA Psed_R0016 NC_015312.1 618939 619011 D tRNA-Glu 618939..619011 Pseudonocardia dioxanivorans CB1190 10362384 Psed_R0017 tRNA Psed_R0017 NC_015312.1 619031 619104 D tRNA-Asp 619031..619104 Pseudonocardia dioxanivorans CB1190 10362385 Psed_R0018 tRNA Psed_R0018 NC_015312.1 619140 619213 D tRNA-Phe 619140..619213 Pseudonocardia dioxanivorans CB1190 10362386 Psed_R0019 tRNA Psed_R0019 NC_015312.1 831356 831431 R tRNA-Arg complement(831356..831431) Pseudonocardia dioxanivorans CB1190 10362600 Psed_R0020 tRNA Psed_R0020 NC_015312.1 852678 852753 D tRNA-Ala 852678..852753 Pseudonocardia dioxanivorans CB1190 10362623 Psed_R0021 tRNA Psed_R0021 NC_015312.1 932060 932130 R tRNA-Gln complement(932060..932130) Pseudonocardia dioxanivorans CB1190 10362700 Psed_R0022 tRNA Psed_R0022 NC_015312.1 965270 965346 D tRNA-Leu 965270..965346 Pseudonocardia dioxanivorans CB1190 10362728 Psed_R0023 tRNA Psed_R0023 NC_015312.1 1191503 1191579 D tRNA-Met 1191503..1191579 Pseudonocardia dioxanivorans CB1190 10362945 Psed_R0025 tRNA Psed_R0025 NC_015312.1 1272434 1272509 D tRNA-Ala 1272434..1272509 Pseudonocardia dioxanivorans CB1190 10363026 Psed_R0026 tRNA Psed_R0026 NC_015312.1 1592241 1592317 R tRNA-Leu complement(1592241..1592317) Pseudonocardia dioxanivorans CB1190 10363348 Psed_R0027 tRNA Psed_R0027 NC_015312.1 1747752 1747823 R tRNA-Arg complement(1747752..1747823) Pseudonocardia dioxanivorans CB1190 10363486 Psed_R0028 tRNA Psed_R0028 NC_015312.1 1933484 1933555 D tRNA-Gln 1933484..1933555 Pseudonocardia dioxanivorans CB1190 10363657 Psed_R0029 tRNA Psed_R0029 NC_015312.1 1933601 1933676 D tRNA-Glu 1933601..1933676 Pseudonocardia dioxanivorans CB1190 10363658 Psed_R0030 tRNA Psed_R0030 NC_015312.1 2059217 2059290 R tRNA-Pro complement(2059217..2059290) Pseudonocardia dioxanivorans CB1190 10363757 Psed_R0031 tRNA Psed_R0031 NC_015312.1 2060733 2060806 D tRNA-Gly 2060733..2060806 Pseudonocardia dioxanivorans CB1190 10363760 Psed_R0032 tRNA Psed_R0032 NC_015312.1 2171816 2171890 R tRNA-Val complement(2171816..2171890) Pseudonocardia dioxanivorans CB1190 10363869 Psed_R0033 tRNA Psed_R0033 NC_015312.1 2171892 2171963 R tRNA-Cys complement(2171892..2171963) Pseudonocardia dioxanivorans CB1190 10363870 Psed_R0034 tRNA Psed_R0034 NC_015312.1 2172030 2172102 R tRNA-Gly complement(2172030..2172102) Pseudonocardia dioxanivorans CB1190 10363871 Psed_R0035 tRNA Psed_R0035 NC_015312.1 2174941 2175012 D tRNA-Val 2174941..2175012 Pseudonocardia dioxanivorans CB1190 10363876 Psed_R0036 tRNA Psed_R0036 NC_015312.1 2286836 2286910 D tRNA-Val 2286836..2286910 Pseudonocardia dioxanivorans CB1190 10363979 Psed_R0038 tRNA Psed_R0038 NC_015312.1 4057158 4057231 R tRNA-Pro complement(4057158..4057231) Pseudonocardia dioxanivorans CB1190 10365634 Psed_R0042 tRNA Psed_R0042 NC_015312.1 4148119 4148195 D tRNA-Leu 4148119..4148195 Pseudonocardia dioxanivorans CB1190 10365721 Psed_R0059 tRNA Psed_R0059 NC_015312.1 4540395 4540488 D tRNA-Sec 4540395..4540488 Pseudonocardia dioxanivorans CB1190 10366057 Psed_R0043 tRNA Psed_R0043 NC_015312.1 4722962 4723039 R tRNA-Met complement(4722962..4723039) Pseudonocardia dioxanivorans CB1190 10366236 Psed_R0044 tRNA Psed_R0044 NC_015312.1 4775928 4776000 R tRNA-Asn complement(4775928..4776000) Pseudonocardia dioxanivorans CB1190 10366289 Psed_R0048 tRNA Psed_R0048 NC_015312.1 5167163 5167236 D tRNA-Arg 5167163..5167236 Pseudonocardia dioxanivorans CB1190 10366659 Psed_R0049 tRNA Psed_R0049 NC_015312.1 5398025 5398097 D tRNA-His 5398025..5398097 Pseudonocardia dioxanivorans CB1190 10366891 Psed_R0050 tRNA Psed_R0050 NC_015312.1 5398206 5398281 D tRNA-Lys 5398206..5398281 Pseudonocardia dioxanivorans CB1190 10366892 Psed_R0051 tRNA Psed_R0051 NC_015312.1 5457464 5457548 D tRNA-Leu 5457464..5457548 Pseudonocardia dioxanivorans CB1190 10366948 Psed_R0052 tRNA Psed_R0052 NC_015312.1 5827962 5828037 R tRNA-Trp complement(5827962..5828037) Pseudonocardia dioxanivorans CB1190 10367316 Psed_R0053 tRNA Psed_R0053 NC_015312.1 5830949 5831024 R tRNA-Met complement(5830949..5831024) Pseudonocardia dioxanivorans CB1190 10367322 Psed_R0054 tRNA Psed_R0054 NC_015312.1 5831060 5831135 R tRNA-Thr complement(5831060..5831135) Pseudonocardia dioxanivorans CB1190 10367323 Psed_R0055 tRNA Psed_R0055 NC_015312.1 5896946 5897027 R tRNA-Tyr complement(5896946..5897027) Pseudonocardia dioxanivorans CB1190 10367389 Psed_R0056 tRNA Psed_R0056 NC_015312.1 6444149 6444223 R tRNA-Thr complement(6444149..6444223) Pseudonocardia dioxanivorans CB1190 10367941 Psed_R0057 tRNA Psed_R0057 NC_015312.1 6868528 6868604 R tRNA-Thr complement(6868528..6868604) Pseudonocardia dioxanivorans CB1190 10368343 Psed_R0058 tRNA Psed_R0058 NC_015312.1 6959024 6959094 D tRNA-Gly 6959024..6959094 Pseudonocardia dioxanivorans CB1190 10368429 Psed_R0013 rRNA Psed_R0013 NC_015312.1 577609 579116 D 16S ribosomal RNA 577609..579116 Pseudonocardia dioxanivorans CB1190 10362351 Psed_R0014 rRNA Psed_R0014 NC_015312.1 579553 582705 D 23S ribosomal RNA 579553..582705 Pseudonocardia dioxanivorans CB1190 10362352 Psed_R0015 rRNA Psed_R0015 NC_015312.1 582838 582954 D 5S ribosomal RNA 582838..582954 Pseudonocardia dioxanivorans CB1190 10362353 Psed_R0039 rRNA Psed_R0039 NC_015312.1 4084619 4084735 R 5S ribosomal RNA complement(4084619..4084735) Pseudonocardia dioxanivorans CB1190 10365662 Psed_R0040 rRNA Psed_R0040 NC_015312.1 4084867 4088018 R 23S ribosomal RNA complement(4084867..4088018) Pseudonocardia dioxanivorans CB1190 10365663 Psed_R0041 rRNA Psed_R0041 NC_015312.1 4088454 4089961 R 16S ribosomal RNA complement(4088454..4089961) Pseudonocardia dioxanivorans CB1190 10365664 Psed_R0045 rRNA Psed_R0045 NC_015312.1 5156541 5156657 R 5S ribosomal RNA complement(5156541..5156657) Pseudonocardia dioxanivorans CB1190 10366653 Psed_R0046 rRNA Psed_R0046 NC_015312.1 5156790 5159941 R 23S ribosomal RNA complement(5156790..5159941) Pseudonocardia dioxanivorans CB1190 10366654 Psed_R0047 rRNA Psed_R0047 NC_015312.1 5160377 5161884 R 16S ribosomal RNA complement(5160377..5161884) Pseudonocardia dioxanivorans CB1190 10366655