-- dump date 20120504_155804 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 357804000001 SEQ_END SEQ_END NC_008709.1 4559598 4559598 DR NC_008709.1; contig end 4559598..4559598 Psychromonas ingrahamii 37 YP_941475.1 CDS Ping_0001 NC_008709.1 6451 7047 R KEGG: ppr:PBPRB1782 putative transposase; putative transposase complement(6451..7047) Psychromonas ingrahamii 37 4625977 YP_941476.1 CDS Ping_0002 NC_008709.1 6998 7483 R KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative complement(6998..7483) Psychromonas ingrahamii 37 4625091 YP_941477.1 CDS hslU NC_008709.1 7861 9195 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(7861..9195) Psychromonas ingrahamii 37 4625092 YP_941478.1 CDS Ping_0004 NC_008709.1 9207 9761 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(9207..9761) Psychromonas ingrahamii 37 4625093 YP_941479.1 CDS ftsN NC_008709.1 10064 10597 R PFAM: Sporulation domain protein; KEGG: pat:Patl_4190 sporulation related; cell division protein FtsN complement(10064..10597) Psychromonas ingrahamii 37 4625094 YP_941480.1 CDS argS NC_008709.1 10601 12349 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(10601..12349) Psychromonas ingrahamii 37 4625095 YP_941481.1 CDS Ping_0007 NC_008709.1 12572 13027 R KEGG: she:Shewmr4_0592 hypothetical protein; hypothetical protein complement(12572..13027) Psychromonas ingrahamii 37 4625096 YP_941482.1 CDS Ping_0008 NC_008709.1 13204 15375 R PFAM: UvrD/REP helicase; KEGG: cps:CPS_0080 DNA helicase II; UvrD/REP helicase complement(13204..15375) Psychromonas ingrahamii 37 4625097 YP_941483.1 CDS Ping_0009 NC_008709.1 15412 16119 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vpa:VP2980 hypothetical protein; HAD family hydrolase complement(15412..16119) Psychromonas ingrahamii 37 4625098 YP_941484.1 CDS Ping_0010 NC_008709.1 16153 17052 R TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sdy:SDY_3934 site-specific recombinase; tyrosine recombinase XerC complement(16153..17052) Psychromonas ingrahamii 37 4625099 YP_941485.1 CDS Ping_0011 NC_008709.1 17602 18108 D PFAM: Uncharacterised conserved protein UCP028301; KEGG: vfi:VF1004 hypothetical cytosolic protein; hypothetical protein 17602..18108 Psychromonas ingrahamii 37 4625100 YP_941486.1 CDS Ping_0012 NC_008709.1 18217 19665 D PFAM: protein of unknown function DUF877; KEGG: pen:PSEEN0524 hypothetical protein; hypothetical protein 18217..19665 Psychromonas ingrahamii 37 4625101 YP_941487.1 CDS Ping_0013 NC_008709.1 19699 20217 D PFAM: protein of unknown function DUF796; KEGG: vpa:VP1393 BfdA; secreted protein Hcp, potential oxidative stress protein 19699..20217 Psychromonas ingrahamii 37 4625102 YP_941488.1 CDS Ping_0014 NC_008709.1 20228 20935 D KEGG: gme:Gmet_3310 lipoprotein, putative; hypothetical protein 20228..20935 Psychromonas ingrahamii 37 4625103 YP_941489.1 CDS Ping_0015 NC_008709.1 20951 22315 D PFAM: protein of unknown function DUF876; KEGG: gme:Gmet_3311 protein of unknown function DUF876; hypothetical protein 20951..22315 Psychromonas ingrahamii 37 4625104 YP_941490.1 CDS Ping_0016 NC_008709.1 22319 22966 D KEGG: bte:BTH_II0856 hypothetical protein; hypothetical protein 22319..22966 Psychromonas ingrahamii 37 4625105 YP_941491.1 CDS Ping_0017 NC_008709.1 22981 26403 D KEGG: gme:Gmet_0274 hypothetical protein; hypothetical protein 22981..26403 Psychromonas ingrahamii 37 4625106 YP_941492.1 CDS Ping_0018 NC_008709.1 26407 28101 D KEGG: pst:PSPTO_2544 hypothetical protein; hypothetical protein 26407..28101 Psychromonas ingrahamii 37 4625107 YP_941493.1 CDS Ping_0019 NC_008709.1 28101 28589 D PFAM: protein of unknown function DUF796; KEGG: bte:BTH_II0868 hcp protein; hypothetical protein 28101..28589 Psychromonas ingrahamii 37 4625108 YP_941494.1 CDS Ping_0020 NC_008709.1 28589 28993 D hypothetical protein 28589..28993 Psychromonas ingrahamii 37 4624950 YP_941495.1 CDS Ping_0021 NC_008709.1 28993 30762 D PFAM: protein of unknown function DUF879; KEGG: gme:Gmet_3313 protein of unknown function DUF879; hypothetical protein 28993..30762 Psychromonas ingrahamii 37 4624951 YP_941496.1 CDS Ping_0022 NC_008709.1 30759 31712 D PFAM: protein of unknown function DUF1305; KEGG: bte:BTH_II0865 protein of unknown function (DUF1305) superfamily; hypothetical protein 30759..31712 Psychromonas ingrahamii 37 4624952 YP_941497.1 CDS Ping_0023 NC_008709.1 31751 34876 D PFAM: Rhs element Vgr protein; KEGG: bma:BMAA0737 rhs element Vgr protein; Rhs element Vgr protein 31751..34876 Psychromonas ingrahamii 37 4624953 YP_941498.1 CDS Ping_0024 NC_008709.1 34893 37742 D PFAM: pentapeptide repeat protein; KEGG: bbr:BB0795 hypothetical protein; pentapeptide repeat-containing protein 34893..37742 Psychromonas ingrahamii 37 4624954 YP_941499.1 CDS Ping_0025 NC_008709.1 37743 38789 D PFAM: pentapeptide repeat protein; KEGG: bpm:BURPS1710b_A0543 hypothetical protein; pentapeptide repeat-containing protein 37743..38789 Psychromonas ingrahamii 37 4624955 YP_941500.1 CDS Ping_0026 NC_008709.1 38873 39523 D KEGG: bpm:BURPS1710b_A1706 hypothetical protein; hypothetical protein 38873..39523 Psychromonas ingrahamii 37 4624956 YP_941501.1 CDS Ping_0027 NC_008709.1 39545 39958 D KEGG: bbr:BB0797 hypothetical protein; hypothetical protein 39545..39958 Psychromonas ingrahamii 37 4624957 YP_941502.1 CDS Ping_0028 NC_008709.1 40134 43757 D PFAM: Carbohydrate-binding family V/XII; Rhs element Vgr protein; KEGG: bma:BMAA0737 rhs element Vgr protein; Rhs element Vgr protein 40134..43757 Psychromonas ingrahamii 37 4624958 YP_941503.1 CDS Ping_0029 NC_008709.1 43781 46711 D PFAM: pentapeptide repeat protein; KEGG: bbr:BB0795 hypothetical protein; pentapeptide repeat-containing protein 43781..46711 Psychromonas ingrahamii 37 4624959 YP_941504.1 CDS Ping_0030 NC_008709.1 46717 47796 D PFAM: pentapeptide repeat protein; KEGG: bpm:BURPS1710b_A0543 hypothetical protein; pentapeptide repeat-containing protein 46717..47796 Psychromonas ingrahamii 37 4624960 YP_941505.1 CDS Ping_0031 NC_008709.1 47840 48484 D KEGG: bps:BPSS0184 hypothetical protein; hypothetical protein 47840..48484 Psychromonas ingrahamii 37 4624961 YP_941506.1 CDS Ping_0032 NC_008709.1 48493 48903 D KEGG: bpa:BPP0711 hypothetical protein; hypothetical protein 48493..48903 Psychromonas ingrahamii 37 4624962 YP_941507.1 CDS Ping_0033 NC_008709.1 48954 50753 D PFAM: histidine kinase, HAMP region domain protein; KEGG: ret:RHE_CH02648 putative transcriptional regulator protein; sensor protein 48954..50753 Psychromonas ingrahamii 37 4624963 YP_941508.1 CDS Ping_0034 NC_008709.1 50753 51106 D hypothetical protein 50753..51106 Psychromonas ingrahamii 37 4624964 YP_941509.1 CDS Ping_0035 NC_008709.1 51362 53788 D PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB1643 putative inner membrane transport protein; major facilitator superfamily transporter 51362..53788 Psychromonas ingrahamii 37 4624965 YP_941510.1 CDS Ping_0036 NC_008709.1 53800 54942 D KEGG: sar:SAR2170 D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 53800..54942 Psychromonas ingrahamii 37 4624966 YP_941511.1 CDS Ping_0037 NC_008709.1 55201 56406 R KEGG: hch:HCH_03644 ABC-type uncharacterized transport system, periplasmic component; ABC transporter periplasmic protein complement(55201..56406) Psychromonas ingrahamii 37 4624967 YP_941512.1 CDS Ping_0038 NC_008709.1 57147 57404 R hypothetical protein complement(57147..57404) Psychromonas ingrahamii 37 4623530 YP_941513.1 CDS Ping_0040 NC_008709.1 58562 59389 R PFAM: diaminopimelate epimerase; KEGG: pat:Patl_4074 diaminopimelate epimerase; diaminopimelate epimerase complement(58562..59389) Psychromonas ingrahamii 37 4623532 YP_941514.1 CDS Ping_0041 NC_008709.1 59442 60707 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pat:Patl_4073 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(59442..60707) Psychromonas ingrahamii 37 4623533 YP_941515.1 CDS Ping_0042 NC_008709.1 61094 61411 D PFAM: Frataxin family protein; KEGG: plu:plu4642 cyaY protein, which belongs to the frataxin family; frataxin family protein 61094..61411 Psychromonas ingrahamii 37 4623534 YP_941516.1 CDS Ping_0043 NC_008709.1 61851 62336 D KEGG: hdu:HD0453 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 61851..62336 Psychromonas ingrahamii 37 4623535 YP_941517.1 CDS Ping_0044 NC_008709.1 63117 64823 D KEGG: sdn:Sden_3050 protease-associated PA; hypothetical protein 63117..64823 Psychromonas ingrahamii 37 4623536 YP_941518.1 CDS Ping_0045 NC_008709.1 65289 66059 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rru:Rru_A2127 serine 3-dehydrogenase; short-chain dehydrogenase/reductase SDR complement(65289..66059) Psychromonas ingrahamii 37 4623537 YP_941519.1 CDS Ping_0046 NC_008709.1 66314 67786 R PFAM: regulatory protein GntR, HTH; KEGG: csa:Csal_0157 transcriptional regulator, GntR family; transcriptional regulator complement(66314..67786) Psychromonas ingrahamii 37 4623538 YP_941520.1 CDS Ping_0047 NC_008709.1 68054 69061 D KEGG: bxe:Bxe_B0694 ABC taurine transporter, periplasmic ligand binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; taurine ABC transporter periplasmic binding protein 68054..69061 Psychromonas ingrahamii 37 4623539 YP_941521.1 CDS Ping_0048 NC_008709.1 69103 69942 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0693 ABC taurine transporter, ATPase subunit; nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein 69103..69942 Psychromonas ingrahamii 37 4623540 YP_941522.1 CDS Ping_0049 NC_008709.1 69952 70944 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0692 ABC taurine transporter, inner membrane subunit; ABC taurine transporter, binding protein inner membrane component 69952..70944 Psychromonas ingrahamii 37 4623541 YP_941523.1 CDS Ping_0050 NC_008709.1 71683 72420 R PFAM: protein of unknown function DUF81; KEGG: csa:Csal_0160 protein of unknown function DUF81; hypothetical protein complement(71683..72420) Psychromonas ingrahamii 37 4623542 YP_941524.1 CDS Ping_0051 NC_008709.1 72640 74052 D PFAM: aminotransferase class-III; KEGG: rde:RD1_0981 taurine--pyruvate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 72640..74052 Psychromonas ingrahamii 37 4623543 YP_941525.1 CDS Ping_0052 NC_008709.1 74599 75579 R PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568; hypothetical protein complement(74599..75579) Psychromonas ingrahamii 37 4623544 YP_941526.1 CDS Ping_0053 NC_008709.1 76031 76843 R KEGG: sde:Sde_3681 pseudouridine synthase, Rsu; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycolase; formamidopyrimidine-DNA glycosylase complement(76031..76843) Psychromonas ingrahamii 37 4623545 YP_941527.1 CDS rpmG NC_008709.1 77146 77301 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(77146..77301) Psychromonas ingrahamii 37 4623546 YP_941528.1 CDS Ping_0055 NC_008709.1 77313 77549 R PFAM: ribosomal protein L28; KEGG: pat:Patl_0048 ribosomal protein L28; 50S ribosomal protein L28 complement(77313..77549) Psychromonas ingrahamii 37 4623547 YP_941529.1 CDS Ping_0056 NC_008709.1 77684 78361 R PFAM: DNA repair protein RadC; KEGG: pat:Patl_0046 DNA repair protein RadC; DNA repair protein RadC complement(77684..78361) Psychromonas ingrahamii 37 4624453 YP_941530.1 CDS Ping_0057 NC_008709.1 78569 79804 D KEGG: vch:VC0215 DNA/pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 78569..79804 Psychromonas ingrahamii 37 4624454 YP_941531.1 CDS Ping_0058 NC_008709.1 79804 80259 D KEGG: she:Shewmr4_3599 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 79804..80259 Psychromonas ingrahamii 37 4624455 YP_941532.1 CDS slmA NC_008709.1 80294 80896 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 80294..80896 Psychromonas ingrahamii 37 4624456 YP_941533.1 CDS Ping_0060 NC_008709.1 80966 81256 R when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ complement(80966..81256) Psychromonas ingrahamii 37 4624457 YP_941534.2 CDS cyaA NC_008709.1 81340 83925 R catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase complement(81340..83925) Psychromonas ingrahamii 37 4624458 YP_941535.1 CDS Ping_0062 NC_008709.1 84139 85116 R PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: stt:t2966 conserved hypothetical protein; glycine cleavage T protein (aminomethyl transferase) complement(84139..85116) Psychromonas ingrahamii 37 4624459 YP_941536.1 CDS Ping_0063 NC_008709.1 85557 85808 D PFAM: protein of unknown function DUF339; KEGG: cps:CPS_4131 TPR repeat protein; hypothetical protein 85557..85808 Psychromonas ingrahamii 37 4624460 YP_941537.1 CDS Ping_0064 NC_008709.1 86239 87870 R KEGG: yps:YPTB2898 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase complement(86239..87870) Psychromonas ingrahamii 37 4624461 YP_941538.1 CDS rpoE NC_008709.1 88101 88682 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 88101..88682 Psychromonas ingrahamii 37 4624462 YP_941539.1 CDS Ping_0066 NC_008709.1 88695 89228 D PFAM: Anti sigma-E protein RseA family protein; KEGG: sfr:Sfri_2934 anti sigma-E protein RseA domain protein; anti sigma-E protein, RseA 88695..89228 Psychromonas ingrahamii 37 4624463 YP_941540.1 CDS Ping_0067 NC_008709.1 89413 90420 D PFAM: MucB/RseB family protein; KEGG: cps:CPS_4127 sigma-E factor regulatory protein RseB; sigma E regulatory protein MucB/RseB 89413..90420 Psychromonas ingrahamii 37 4624464 YP_941541.1 CDS rseC NC_008709.1 90424 90873 D PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: shm:Shewmr7_2933 positive regulator of sigma E, RseC/MucC; sigma-E factor regulatory protein RseC 90424..90873 Psychromonas ingrahamii 37 4624465 YP_941542.1 CDS Ping_0069 NC_008709.1 97662 98561 D PFAM: transposase, IS4 family protein; KEGG: sdn:Sden_3399 transposase, IS4; transposase, IS4 family protein 97662..98561 Psychromonas ingrahamii 37 4626623 YP_941543.1 CDS Ping_0070 NC_008709.1 98920 99183 R KEGG: hso:HS_0309 conserved hypothetical protein; hypothetical protein complement(98920..99183) Psychromonas ingrahamii 37 4626624 YP_941544.1 CDS aroE NC_008709.1 99340 100158 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(99340..100158) Psychromonas ingrahamii 37 4626625 YP_941545.1 CDS Ping_0072 NC_008709.1 100251 100826 R PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: vfi:VF2536 Sua5 protein; ribosome maturation factor complement(100251..100826) Psychromonas ingrahamii 37 4626626 YP_941546.1 CDS Ping_0073 NC_008709.1 100832 101341 R KEGG: ppr:PBPRA3574 hypothetical phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(100832..101341) Psychromonas ingrahamii 37 4626627 YP_941547.1 CDS Ping_0074 NC_008709.1 101393 101956 R PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase; DNA topoisomerase type IA Zn finger domain-containing protein complement(101393..101956) Psychromonas ingrahamii 37 4626628 YP_941548.1 CDS Ping_0075 NC_008709.1 101958 102431 R PFAM: protein of unknown function DUF494; KEGG: ilo:IL0020 hypothetical protein; hypothetical protein complement(101958..102431) Psychromonas ingrahamii 37 4626629 YP_941549.1 CDS Ping_0076 NC_008709.1 102477 103535 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA; DNA protecting protein DprA complement(102477..103535) Psychromonas ingrahamii 37 4626630 YP_941550.1 CDS Ping_0077 NC_008709.1 103658 104740 R PFAM: Peptidoglycan-binding LysM; KEGG: sfr:Sfri_0025 peptidoglycan-binding LysM; peptidoglycan-binding LysM complement(103658..104740) Psychromonas ingrahamii 37 4626631 YP_941551.1 CDS Ping_0078 NC_008709.1 104839 105342 D KEGG: vvy:VV3225 N-formylmethionyl-tRNA deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 104839..105342 Psychromonas ingrahamii 37 4626632 YP_941552.1 CDS Ping_0079 NC_008709.1 105437 106387 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: she:Shewmr4_0028 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 105437..106387 Psychromonas ingrahamii 37 4626633 YP_941553.1 CDS Ping_0080 NC_008709.1 106392 107702 D TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: vch:VC0044 Sun protein; sun protein 106392..107702 Psychromonas ingrahamii 37 4626634 YP_941554.1 CDS trkA NC_008709.1 107913 109289 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 107913..109289 Psychromonas ingrahamii 37 4626635 YP_941555.1 CDS trkH NC_008709.1 109302 110747 D PFAM: cation transporter; KEGG: vpa:VP3046 potassium uptake protein TrkH; potassium uptake protein TrkH 109302..110747 Psychromonas ingrahamii 37 4626636 YP_941556.1 CDS Ping_0083 NC_008709.1 111015 112376 R PFAM: protein of unknown function DUF195; KEGG: ssn:SSO_4007 putative alpha helix chain; hypothetical protein complement(111015..112376) Psychromonas ingrahamii 37 4626637 YP_941557.1 CDS Ping_0084 NC_008709.1 112376 112630 R hypothetical protein complement(112376..112630) Psychromonas ingrahamii 37 4626638 YP_941558.1 CDS Ping_0085 NC_008709.1 113145 114980 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 113145..114980 Psychromonas ingrahamii 37 4626639 YP_941559.1 CDS Ping_0086 NC_008709.1 115296 116246 R KEGG: ppr:PBPRB0059 putative transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(115296..116246) Psychromonas ingrahamii 37 4626640 YP_941560.1 CDS Ping_0087 NC_008709.1 116597 117577 R PFAM: putative sugar-binding domain protein; KEGG: vfi:VFA0400 PTS system, mannitol-specific IIBC component; transcriptional regulator complement(116597..117577) Psychromonas ingrahamii 37 4625010 YP_941561.1 CDS Ping_0088 NC_008709.1 118212 120098 D TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: vpa:VP0370 PTS system, mannitol-specific IIABC component; PTS system, mannitol-specific IIABC protein 118212..120098 Psychromonas ingrahamii 37 4625011 YP_941562.1 CDS Ping_0089 NC_008709.1 120193 121341 D PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: ppr:PBPRB0362 putative mannitol-1-phosphate 5-dehydrogenase; mannitol-1-phosphate 5-dehydrogenase 120193..121341 Psychromonas ingrahamii 37 4625012 YP_941563.1 CDS mtlR NC_008709.1 121396 121935 D Acts as a repressor of the mtlAD operon; mannitol repressor protein 121396..121935 Psychromonas ingrahamii 37 4625013 YP_941564.1 CDS Ping_0091 NC_008709.1 122411 123406 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: msu:MS2079 lactate dehydrogenase and related dehydrogenases; fermentative D-lactate dehydrogenase, NAD-dependent complement(122411..123406) Psychromonas ingrahamii 37 4625014 YP_941565.1 CDS Ping_0092 NC_008709.1 123735 124835 D KEGG: mag:amb2360 hypothetical protein; hypothetical protein 123735..124835 Psychromonas ingrahamii 37 4625015 YP_941566.1 CDS Ping_0093 NC_008709.1 124919 126550 R PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase complement(124919..126550) Psychromonas ingrahamii 37 4625016 YP_941567.1 CDS Ping_0094 NC_008709.1 126788 127648 R PFAM: Hsp33 protein; KEGG: eca:ECA4105 heat shock protein (33 kDa chaperonin); Hsp33 protein complement(126788..127648) Psychromonas ingrahamii 37 4625017 YP_941568.1 CDS Ping_0095 NC_008709.1 127724 128128 R PFAM: RNA-binding S4 domain protein; KEGG: vfi:VF2476 heat shock protein 15; RNA-binding S4 domain-containing protein complement(127724..128128) Psychromonas ingrahamii 37 4625018 YP_941569.1 CDS Ping_0096 NC_008709.1 128460 129293 D TIGRFAM: general secretion pathway protein C; PFAM: PDZ/DHR/GLGF domain protein; KEGG: sfr:Sfri_0104 general secretion pathway protein C; general secretion pathway protein C 128460..129293 Psychromonas ingrahamii 37 4625019 YP_941570.1 CDS Ping_0097 NC_008709.1 129387 131375 D TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: cps:CPS_4591 general secretion pathway protein D; general secretion pathway protein D 129387..131375 Psychromonas ingrahamii 37 4625020 YP_941571.1 CDS Ping_0098 NC_008709.1 131375 132910 D KEGG: sfr:Sfri_0106 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 131375..132910 Psychromonas ingrahamii 37 4625021 YP_941572.1 CDS Ping_0099 NC_008709.1 132936 134126 D TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: shm:Shewmr7_0153 general secretion pathway protein F; general secretion pathway protein F 132936..134126 Psychromonas ingrahamii 37 4625022 YP_941573.1 CDS Ping_0100 NC_008709.1 134210 134644 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: sfr:Sfri_0108 general secretion pathway protein G; general secretion pathway protein G 134210..134644 Psychromonas ingrahamii 37 4625023 YP_941574.1 CDS Ping_0101 NC_008709.1 134713 135258 D KEGG: cps:CPS_4587 general secretion pathway protein H; general secretion pathway protein H 134713..135258 Psychromonas ingrahamii 37 4625024 YP_941575.1 CDS Ping_0102 NC_008709.1 135255 135641 D TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: eca:ECA3104 general secretion pathway protein I; general secretion pathway protein I 135255..135641 Psychromonas ingrahamii 37 4625025 YP_941576.1 CDS Ping_0103 NC_008709.1 135628 136263 D TIGRFAM: general secretion pathway protein J; KEGG: ppr:PBPRA3475 putative Type II secretory pathway, component EpsJ; general secretion pathway protein J 135628..136263 Psychromonas ingrahamii 37 4625026 YP_941577.1 CDS Ping_0104 NC_008709.1 136263 137246 D PFAM: General secretion pathway protein K; KEGG: vch:VC2726 general secretion pathway protein K; general secretion pathway protein K 136263..137246 Psychromonas ingrahamii 37 4625027 YP_941578.1 CDS Ping_0105 NC_008709.1 137299 138510 D TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: sfr:Sfri_0113 general secretion pathway protein L; general secretion pathway protein L 137299..138510 Psychromonas ingrahamii 37 4625028 YP_941579.1 CDS Ping_0106 NC_008709.1 138640 139122 D PFAM: General secretion pathway M protein; KEGG: ppr:PBPRA3472 putative general secretion pathway protein M; general secretion pathway M protein 138640..139122 Psychromonas ingrahamii 37 4626175 YP_941580.1 CDS Ping_0107 NC_008709.1 139160 139912 D PFAM: type II secretion system protein N; KEGG: ppr:PBPRA3471 hypothetical general secretion pathway protein N; type II secretion system protein N 139160..139912 Psychromonas ingrahamii 37 4626176 YP_941581.1 CDS Ping_0108 NC_008709.1 140042 140671 D KEGG: pat:Patl_4247 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor, LexA 140042..140671 Psychromonas ingrahamii 37 4626177 YP_941582.1 CDS Ping_0109 NC_008709.1 140766 141404 D PFAM: electron transport protein SCO1/SenC; KEGG: pat:Patl_4237 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 140766..141404 Psychromonas ingrahamii 37 4626178 YP_941583.1 CDS Ping_0110 NC_008709.1 141500 142909 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: vfi:VF2440 Na(+) driven multidrug efflux pump; MATE efflux family protein 141500..142909 Psychromonas ingrahamii 37 4626179 YP_941584.1 CDS Ping_0111 NC_008709.1 143052 143534 R PFAM: GCN5-related N-acetyltransferase; KEGG: syn:slr1340 hypothetical protein; N-acetyltransferase GCN5 complement(143052..143534) Psychromonas ingrahamii 37 4626180 YP_941585.1 CDS Ping_0112 NC_008709.1 143670 144587 D PFAM: homoserine O-succinyltransferase; KEGG: vvy:VV1492 homoserine trans-succinylase; homoserine O-succinyltransferase 143670..144587 Psychromonas ingrahamii 37 4626181 YP_941586.1 CDS metH NC_008709.1 145732 149415 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 145732..149415 Psychromonas ingrahamii 37 4626182 YP_941587.1 CDS Ping_0114 NC_008709.1 149908 153150 D PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SMART: DEAD-like helicases-like; KEGG: shm:Shewmr7_2687 SNF2-related protein; SNF2-like protein 149908..153150 Psychromonas ingrahamii 37 4626183 YP_941588.1 CDS Ping_0115 NC_008709.1 153210 154310 R PFAM: ferredoxin; MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: vfi:VFA0264 oxidoreductase (iron-sulfur cluster biosynthesis); MOSC domain-containing protein complement(153210..154310) Psychromonas ingrahamii 37 4626184 YP_941589.1 CDS mgsA NC_008709.1 154335 154793 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(154335..154793) Psychromonas ingrahamii 37 4626185 YP_941590.1 CDS Ping_0117 NC_008709.1 155281 155697 R KEGG: vpa:VP2940 hypothetical protein; hypothetical protein complement(155281..155697) Psychromonas ingrahamii 37 4626186 YP_941591.1 CDS Ping_0118 NC_008709.1 155863 157293 D catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 155863..157293 Psychromonas ingrahamii 37 4626187 YP_941592.1 CDS nudE NC_008709.1 157390 157947 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE complement(157390..157947) Psychromonas ingrahamii 37 4626188 YP_941593.1 CDS Ping_0120 NC_008709.1 159129 160433 D KEGG: cac:CAC1437 diverged AAA-family ATPase containing protein; AAA ATPase 159129..160433 Psychromonas ingrahamii 37 4626189 YP_941594.1 CDS Ping_0121 NC_008709.1 160558 161634 D KEGG: psb:Psyr_2649 hypothetical protein; hypothetical protein 160558..161634 Psychromonas ingrahamii 37 4626190 YP_941595.1 CDS Ping_0122 NC_008709.1 161807 165100 D KEGG: plu:plu0126 hypothetical protein; hypothetical protein 161807..165100 Psychromonas ingrahamii 37 4626191 YP_941596.1 CDS Ping_0125 NC_008709.1 167753 168175 D PFAM: UspA domain protein; KEGG: ppr:PBPRB0088 putative universal stress protein A; universal stress protein 167753..168175 Psychromonas ingrahamii 37 4626036 YP_941597.1 CDS Ping_0127 NC_008709.1 169056 169562 R KEGG: ppr:PBPRB1884 hypothetical protein; hypothetical protein complement(169056..169562) Psychromonas ingrahamii 37 4626038 YP_941598.1 CDS Ping_0128 NC_008709.1 169555 170247 R KEGG: sma:SAV7247 hypothetical protein; hypothetical protein complement(169555..170247) Psychromonas ingrahamii 37 4626039 YP_941599.1 CDS Ping_0129 NC_008709.1 170407 171033 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(170407..171033) Psychromonas ingrahamii 37 4626040 YP_941600.1 CDS Ping_0130 NC_008709.1 171030 171998 R PFAM: PfkB domain protein; KEGG: ppr:PBPRB1882 hypothetical carbohydrate kinase; 2-dehydro-3-deoxygluconokinase complement(171030..171998) Psychromonas ingrahamii 37 4626041 YP_941601.1 CDS Ping_0131 NC_008709.1 171998 173431 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(171998..173431) Psychromonas ingrahamii 37 4626042 YP_941602.1 CDS Ping_0132 NC_008709.1 173478 174941 R PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: ppr:PBPRB1880 putative mannonate oxidoreductase; D-mannonate oxidoreductase NAD-binding complement(173478..174941) Psychromonas ingrahamii 37 4626043 YP_941603.1 CDS Ping_0133 NC_008709.1 175017 176324 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ppr:PBPRB1879 C4-dicarboxylate transport system, putative integral membrane protein; TRAP dicarboxylate transporter subunit DctM complement(175017..176324) Psychromonas ingrahamii 37 4626044 YP_941604.1 CDS dctQ-4 NC_008709.1 176391 176882 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ppr:PBPRB1878 putative small integral C4-dicarboxylate membrane transport protein; tripartite ATP-independent periplasmic transporter DctQ complement(176391..176882) Psychromonas ingrahamii 37 4626045 YP_941605.1 CDS Ping_0135 NC_008709.1 177167 178141 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vpa:VPA1702 putative dicarboxylate-binding periplasmic protein; TRAP dicarboxylate transporter subunit DctP 177167..178141 Psychromonas ingrahamii 37 4626046 YP_941606.1 CDS Ping_0136 NC_008709.1 178308 179492 D catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 178308..179492 Psychromonas ingrahamii 37 4626047 YP_941607.1 CDS Ping_0137 NC_008709.1 179718 179915 D hypothetical protein 179718..179915 Psychromonas ingrahamii 37 4626048 YP_941608.1 CDS Ping_0138 NC_008709.1 180220 181026 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: vpa:VPA1701 putative transcriptional regulatory protein; GntR family transcriptional regulator 180220..181026 Psychromonas ingrahamii 37 4626049 YP_941609.1 CDS Ping_0139 NC_008709.1 182140 184401 D PFAM: glycoside hydrolase, family 3 domain protein; KEGG: bur:Bcep18194_C6710 beta-glucosidase; glycoside hydrolase family protein 182140..184401 Psychromonas ingrahamii 37 4626344 YP_941610.1 CDS Ping_0141 NC_008709.1 186414 187397 R PFAM: Integrase, catalytic region; KEGG: cbu:CBU_1544 transposase, IS30 family; integrase catalytic subunit complement(186414..187397) Psychromonas ingrahamii 37 4626346 YP_941611.1 CDS Ping_0142 NC_008709.1 187432 189051 D KEGG: rfr:Rfer_4055 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase 187432..189051 Psychromonas ingrahamii 37 4626347 YP_941612.1 CDS Ping_0143 NC_008709.1 189571 189792 D hypothetical protein 189571..189792 Psychromonas ingrahamii 37 4626348 YP_941613.1 CDS Ping_0145 NC_008709.1 190162 191559 R PFAM: type III restriction enzyme, res subunit; KEGG: sfr:Sfri_3418 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit complement(190162..191559) Psychromonas ingrahamii 37 4626350 YP_941614.1 CDS Ping_0146 NC_008709.1 191553 192122 R KEGG: ppr:PBPRA1806 hypothetical protein; hypothetical protein complement(191553..192122) Psychromonas ingrahamii 37 4626351 YP_941615.1 CDS Ping_0147 NC_008709.1 192455 192679 D PFAM: helix-turn-helix domain protein; KEGG: vpa:VP1073 putative immunity repressor protein; DNA-binding transcriptional regulator 192455..192679 Psychromonas ingrahamii 37 4626352 YP_941616.1 CDS Ping_0149 NC_008709.1 193517 194719 D PFAM: restriction modification system DNA specificity domain; KEGG: mma:MM3142 type I restriction-modification system specificity subunit; restriction modification system DNA specificity subunit 193517..194719 Psychromonas ingrahamii 37 4626354 YP_941617.1 CDS Ping_0150 NC_008709.1 194756 197338 D PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cch:Cag_0810 DEAD/DEAH box helicase-like; type III restriction enzyme, res subunit 194756..197338 Psychromonas ingrahamii 37 4626355 YP_941618.1 CDS Ping_0151 NC_008709.1 197542 198213 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pat:Patl_0139 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase complement(197542..198213) Psychromonas ingrahamii 37 4626356 YP_941619.1 CDS Ping_0152 NC_008709.1 198292 198819 R hypothetical protein complement(198292..198819) Psychromonas ingrahamii 37 4626357 YP_941620.1 CDS Ping_0153 NC_008709.1 198816 201569 R hypothetical protein complement(198816..201569) Psychromonas ingrahamii 37 4626358 YP_941621.1 CDS Ping_0154 NC_008709.1 201571 203889 R hypothetical protein complement(201571..203889) Psychromonas ingrahamii 37 4626359 YP_941622.1 CDS Ping_0155 NC_008709.1 203882 205105 R PFAM: phage integrase family protein; KEGG: bca:BCE0986 Tn554-related, transposase A; phage integrase family protein complement(203882..205105) Psychromonas ingrahamii 37 4626360 YP_941623.1 CDS Ping_0156 NC_008709.1 205197 205802 D PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pfo:Pfl_0283 HAD-superfamily hydrolase subfamily IA, variant 3; hydrolase 205197..205802 Psychromonas ingrahamii 37 4626361 YP_941624.1 CDS Ping_0157 NC_008709.1 206186 208741 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: ppr:PBPRA0274 putative penicillin-binding protein 1A; penicillin-binding protein, 1A family protein complement(206186..208741) Psychromonas ingrahamii 37 4626287 YP_941625.1 CDS Ping_0158 NC_008709.1 208944 210008 D TIGRFAM: type IV pilus assembly protein PilM; KEGG: shm:Shewmr7_0242 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 208944..210008 Psychromonas ingrahamii 37 4626288 YP_941626.1 CDS Ping_0159 NC_008709.1 210001 210558 D PFAM: Fimbrial assembly family protein; KEGG: sfr:Sfri_0371 fimbrial assembly family protein; fimbrial assembly family protein 210001..210558 Psychromonas ingrahamii 37 4626289 YP_941627.1 CDS pilO NC_008709.1 210558 211130 D PFAM: Pilus assembly protein, PilO; KEGG: sdn:Sden_0258 pilus assembly protein, PilO; type IV pilus biogenesis protein PilO 210558..211130 Psychromonas ingrahamii 37 4626290 YP_941628.1 CDS pilP NC_008709.1 211127 211651 D PFAM: Pilus assembly protein, PilQ; KEGG: sfr:Sfri_0373 pilus assembly protein, PilQ; type IV pilus biogenesis protein PilP 211127..211651 Psychromonas ingrahamii 37 4626291 YP_941629.1 CDS Ping_0162 NC_008709.1 211679 213748 D TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; KEGG: sdn:Sden_0260 type II and III secretion system protein; type IV pilus secretin PilQ 211679..213748 Psychromonas ingrahamii 37 4626292 YP_941630.1 CDS Ping_0163 NC_008709.1 213919 214434 D PFAM: shikimate kinase; KEGG: vfi:VF2292 shikimate kinase I; shikimate kinase 213919..214434 Psychromonas ingrahamii 37 4626293 YP_941631.1 CDS Ping_0164 NC_008709.1 214434 215504 D PFAM: 3-dehydroquinate synthase; KEGG: shm:Shewmr7_0248 3-dehydroquinate synthase; 3-dehydroquinate synthase 214434..215504 Psychromonas ingrahamii 37 4626294 YP_941632.1 CDS Ping_0165 NC_008709.1 215708 216643 D PFAM: Sporulation domain protein; KEGG: vfi:VF2290 DamX protein; sporulation domain-containing protein 215708..216643 Psychromonas ingrahamii 37 4626295 YP_941633.1 CDS Ping_0166 NC_008709.1 216636 217463 D KEGG: vfi:VF2289 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 216636..217463 Psychromonas ingrahamii 37 4626296 YP_941634.1 CDS Ping_0167 NC_008709.1 217676 218344 D PFAM: ribulose-phosphate 3-epimerase; thiamine monophosphate synthase; KEGG: sfr:Sfri_0381 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 217676..218344 Psychromonas ingrahamii 37 4626297 YP_941635.1 CDS Ping_0168 NC_008709.1 218355 219356 D KEGG: pat:Patl_0658 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 218355..219356 Psychromonas ingrahamii 37 4623950 YP_941636.1 CDS Ping_0169 NC_008709.1 219431 219844 R KEGG: eca:ECA1929 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(219431..219844) Psychromonas ingrahamii 37 4623951 YP_941637.1 CDS Ping_0170 NC_008709.1 219957 220394 R PFAM: cytochrome c, class I; KEGG: vpa:VP0042 cytochrome c5; cytochrome c, class I complement(219957..220394) Psychromonas ingrahamii 37 4623952 YP_941638.1 CDS Ping_0171 NC_008709.1 220480 221076 R PFAM: protein of unknown function DUF205; KEGG: ppr:PBPRA0435 hypothetical protein; hypothetical protein complement(220480..221076) Psychromonas ingrahamii 37 4623953 YP_941639.1 CDS Ping_0172 NC_008709.1 221202 221555 D TIGRFAM: dihydroneopterin aldolase; KEGG: vfi:VF2247 dihydroneopterin aldolase; dihydroneopterin aldolase 221202..221555 Psychromonas ingrahamii 37 4623954 YP_941640.1 CDS Ping_0173 NC_008709.1 221555 222049 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: pat:Patl_1045 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 221555..222049 Psychromonas ingrahamii 37 4623955 YP_941641.1 CDS Ping_0174 NC_008709.1 222077 222880 D KEGG: pha:PSHAa2300 undecaprenyl pyrophosphate phosphatase; TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; putative undecaprenol kinase 222077..222880 Psychromonas ingrahamii 37 4626819 YP_941642.1 CDS Ping_0175 NC_008709.1 223058 223783 R PFAM: conserved hypothetical protein 245; KEGG: cps:CPS_4093 putative membrane protein; hypothetical protein complement(223058..223783) Psychromonas ingrahamii 37 4626820 YP_941643.1 CDS Ping_0176 NC_008709.1 223829 225058 R PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; KEGG: sfr:Sfri_2984 metal dependent phosphohydrolase; bifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(223829..225058) Psychromonas ingrahamii 37 4626821 YP_941644.1 CDS Ping_0177 NC_008709.1 225135 226889 D PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: sdn:Sden_2822 peptidoglycan-binding domain 1; general secretion pathway ATPase protein 225135..226889 Psychromonas ingrahamii 37 4626822 YP_941645.1 CDS Ping_0178 NC_008709.1 226889 227716 D KEGG: ilo:IL1964 general secretion pathway protein B; general secretion pathway protein B 226889..227716 Psychromonas ingrahamii 37 4626823 YP_941646.1 CDS Ping_0179 NC_008709.1 227769 228338 R PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: eca:ECA3587 putative membrane protein; SH3 type 3 domain-containing protein complement(227769..228338) Psychromonas ingrahamii 37 4626824 YP_941647.1 CDS Ping_0180 NC_008709.1 228782 230047 R PFAM: phosphate transporter; KEGG: pat:Patl_3319 phosphate transporter; phosphate transporter complement(228782..230047) Psychromonas ingrahamii 37 4626825 YP_941648.1 CDS Ping_0181 NC_008709.1 230064 230744 R PFAM: protein of unknown function DUF47; KEGG: sfr:Sfri_0565 protein of unknown function DUF47; hypothetical protein complement(230064..230744) Psychromonas ingrahamii 37 4626826 YP_941649.1 CDS Ping_0182 NC_008709.1 230918 232426 D PFAM: adenylate cyclase; KEGG: vvy:VV0577 hypothetical protein; adenylate cyclase 230918..232426 Psychromonas ingrahamii 37 4626827 YP_941650.1 CDS Ping_0183 NC_008709.1 232541 232882 R KEGG: cps:CPS_4193 hypothetical protein; hypothetical protein complement(232541..232882) Psychromonas ingrahamii 37 4626828 YP_941651.1 CDS Ping_0184 NC_008709.1 232885 233532 R KEGG: shm:Shewmr7_0857 hypothetical protein; hypothetical protein complement(232885..233532) Psychromonas ingrahamii 37 4626829 YP_941652.1 CDS Ping_0185 NC_008709.1 233944 234627 R PFAM: PspA/IM30 family protein; KEGG: cps:CPS_4191 PspA/IM30 family protein; phage shock protein A, PspA complement(233944..234627) Psychromonas ingrahamii 37 4626830 YP_941653.1 CDS Ping_0186 NC_008709.1 234643 235056 R KEGG: shm:Shewmr7_0859 hypothetical protein; hypothetical protein complement(234643..235056) Psychromonas ingrahamii 37 4626831 YP_941654.1 CDS Ping_0187 NC_008709.1 235412 238252 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 235412..238252 Psychromonas ingrahamii 37 4626832 YP_941655.1 CDS Ping_0188 NC_008709.1 238361 239281 R TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: yps:YPTB2490 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase complement(238361..239281) Psychromonas ingrahamii 37 4626833 YP_941656.1 CDS Ping_0189 NC_008709.1 239372 240769 R PFAM: AMP-dependent synthetase and ligase; KEGG: she:Shewmr4_3770 O-succinylbenzoate-CoA ligase; O-succinylbenzoic acid--CoA ligase complement(239372..240769) Psychromonas ingrahamii 37 4626834 YP_941657.1 CDS Ping_0190 NC_008709.1 240754 241767 R KEGG: ypn:YPN_2119 O-succinylbenzoate-CoA synthase; O-succinylbenzoate-CoA synthase complement(240754..241767) Psychromonas ingrahamii 37 4626835 YP_941658.1 CDS Ping_0191 NC_008709.1 241782 242858 R KEGG: ssn:SSO_4233 alanine racemase 1; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(241782..242858) Psychromonas ingrahamii 37 4627074 YP_941659.1 CDS dnaB NC_008709.1 242921 244321 R KEGG: ecs:ECs5034 replicative DNA helicase DnaB; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase; replicative DNA helicase DnaB complement(242921..244321) Psychromonas ingrahamii 37 4627075 YP_941660.1 CDS Ping_0193 NC_008709.1 244433 244789 R PFAM: diacylglycerol kinase; KEGG: sde:Sde_1725 diacylglycerol kinase; diacylglycerol kinase complement(244433..244789) Psychromonas ingrahamii 37 4627076 YP_941661.1 CDS Ping_0194 NC_008709.1 245011 247410 D PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3788 glycerol-3-phosphate O-acyltransferase; glycerol-3-phosphate O-acyltransferase 245011..247410 Psychromonas ingrahamii 37 4627077 YP_941662.1 CDS Ping_0195 NC_008709.1 247404 247814 D PFAM: Rhodanese domain protein; KEGG: ilo:IL1695 rhodanese-related sulfurtransferase; rhodanese domain-containing protein 247404..247814 Psychromonas ingrahamii 37 4627078 YP_941663.1 CDS Ping_0196 NC_008709.1 247894 248517 D PFAM: protein of unknown function UPF0029; KEGG: plu:plu4400 hypothetical protein; elongation factor 247894..248517 Psychromonas ingrahamii 37 4627079 YP_941664.1 CDS Ping_0197 NC_008709.1 248522 249988 D TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: vvy:VV0031 Trk-type K+ transport system, membrane component; potassium uptake protein, TrkH family protein 248522..249988 Psychromonas ingrahamii 37 4627080 YP_941665.1 CDS Ping_0198 NC_008709.1 249992 250513 D KEGG: yps:YPTB0271 protoporphyrinogen oxidase; protoporphyrinogen oxidase 249992..250513 Psychromonas ingrahamii 37 4627081 YP_941666.1 CDS Ping_0199 NC_008709.1 250662 252470 D KEGG: vvy:VV3187 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ 250662..252470 Psychromonas ingrahamii 37 4627082 YP_941667.1 CDS Ping_0200 NC_008709.1 252542 252895 R hypothetical protein complement(252542..252895) Psychromonas ingrahamii 37 4627083 YP_941668.1 CDS Ping_0201 NC_008709.1 253191 254867 D KEGG: eca:ECA2660 predicted ATP-dependent endonuclease of the OLD family; ATP-dependent endonuclease of the OLD family protein 253191..254867 Psychromonas ingrahamii 37 4627084 YP_941669.1 CDS hslJ NC_008709.1 254890 255348 R PFAM: protein of unknown function DUF306, Meta and HslJ; KEGG: vch:VC1663 heat shock protein HslJ; heat shock protein HslJ complement(254890..255348) Psychromonas ingrahamii 37 4627085 YP_941670.1 CDS Ping_0203 NC_008709.1 255345 257492 R KEGG: shm:Shewmr7_0328 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase complement(255345..257492) Psychromonas ingrahamii 37 4627086 YP_941671.1 CDS Ping_0205 NC_008709.1 258924 259208 R hypothetical protein complement(258924..259208) Psychromonas ingrahamii 37 4627088 YP_941672.1 CDS anmK NC_008709.1 259352 260476 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(259352..260476) Psychromonas ingrahamii 37 4627089 YP_941673.1 CDS Ping_0207 NC_008709.1 260466 261833 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(260466..261833) Psychromonas ingrahamii 37 4627090 YP_941674.1 CDS Ping_0208 NC_008709.1 261850 262329 R KEGG: pha:PSHAa2750 hypothetical protein; hypothetical protein complement(261850..262329) Psychromonas ingrahamii 37 4627091 YP_941675.1 CDS Ping_0209 NC_008709.1 262345 262911 R PFAM: protein of unknown function DUF414; KEGG: eca:ECA0024 hypothetical protein; hypothetical protein complement(262345..262911) Psychromonas ingrahamii 37 4627147 YP_941676.1 CDS Ping_0210 NC_008709.1 263126 263728 R PFAM: cytochrome c, class I; KEGG: vvy:VV0188 cytochrome c4; cytochrome c, class I complement(263126..263728) Psychromonas ingrahamii 37 4627148 YP_941677.1 CDS engB NC_008709.1 264061 264717 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 264061..264717 Psychromonas ingrahamii 37 4627149 YP_941678.1 CDS Ping_0212 NC_008709.1 264982 267033 D PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: shm:Shewmr7_3935 oligopeptidase A; oligopeptidase A 264982..267033 Psychromonas ingrahamii 37 4627150 YP_941679.1 CDS Ping_0213 NC_008709.1 267138 267734 R KEGG: hch:HCH_06467 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase complement(267138..267734) Psychromonas ingrahamii 37 4627151 YP_941680.1 CDS Ping_0214 NC_008709.1 267796 269115 R PFAM: Na+/H+ antiporter NhaA; KEGG: wsu:WS1251 NA(+)/H(+) antiporter 1; Na+/H+ antiporter NhaA complement(267796..269115) Psychromonas ingrahamii 37 4627152 YP_941681.1 CDS Ping_0215 NC_008709.1 269538 270185 R PFAM: beta-lactamase domain protein; KEGG: yps:YPTB1433 metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein complement(269538..270185) Psychromonas ingrahamii 37 4627153 YP_941682.1 CDS Ping_0216 NC_008709.1 270302 271861 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(270302..271861) Psychromonas ingrahamii 37 4627154 YP_941683.1 CDS Ping_0217 NC_008709.1 272473 272919 D KEGG: vch:VCA0615 peptide methionine sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 272473..272919 Psychromonas ingrahamii 37 4627155 YP_941684.1 CDS Ping_0218 NC_008709.1 273270 274334 D KEGG: hin:HI0268 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 273270..274334 Psychromonas ingrahamii 37 4627156 YP_941685.1 CDS Ping_0219 NC_008709.1 274322 275290 D KEGG: eci:UTI89_C3803 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; biotin--acetyl-CoA-carboxylase ligase 274322..275290 Psychromonas ingrahamii 37 4627157 YP_941686.1 CDS Ping_0220 NC_008709.1 275335 275583 R hypothetical protein complement(275335..275583) Psychromonas ingrahamii 37 4627158 YP_941687.1 CDS Ping_0221 NC_008709.1 276412 278772 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sdn:Sden_3396 GGDEF domain; diguanylate cyclase/phosphodiesterase complement(276412..278772) Psychromonas ingrahamii 37 4627162 YP_941688.1 CDS Ping_0222 NC_008709.1 279687 281114 D PFAM: Na+/H+ antiporter NhaA; KEGG: sdn:Sden_1480 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 279687..281114 Psychromonas ingrahamii 37 4627163 YP_941689.1 CDS Ping_0223 NC_008709.1 281415 282098 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eba:ebA6908 conserved hypothetical protein, predicted short-chain dehydrogenase/reductase SDR family; short-chain dehydrogenase/reductase SDR complement(281415..282098) Psychromonas ingrahamii 37 4627164 YP_941690.1 CDS Ping_0224 NC_008709.1 282480 283931 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: ppr:PBPRA0467 putative xylulose kinase; xylulokinase complement(282480..283931) Psychromonas ingrahamii 37 4627165 YP_941691.1 CDS Ping_0225 NC_008709.1 284627 284863 R PFAM: SirA family protein; KEGG: ppr:PBPRA0060 SirA protein; regulator of information in SirA family protein complement(284627..284863) Psychromonas ingrahamii 37 4625785 YP_941692.1 CDS Ping_0226 NC_008709.1 285034 287670 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(285034..287670) Psychromonas ingrahamii 37 4625786 YP_941693.1 CDS Ping_0227 NC_008709.1 287814 288962 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase complement(287814..288962) Psychromonas ingrahamii 37 4625787 YP_941694.1 CDS argC NC_008709.1 289475 290497 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 289475..290497 Psychromonas ingrahamii 37 4625788 YP_941695.1 CDS Ping_0229 NC_008709.1 290513 291295 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 290513..291295 Psychromonas ingrahamii 37 4625789 YP_941696.1 CDS Ping_0230 NC_008709.1 291319 292227 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 291319..292227 Psychromonas ingrahamii 37 4625790 YP_941697.1 CDS Ping_0231 NC_008709.1 292252 293460 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 292252..293460 Psychromonas ingrahamii 37 4625791 YP_941698.1 CDS Ping_0232 NC_008709.1 293604 295484 D catalyzes the formation of arginine from (N-L-arginino)succinate and the formation of N-acetylglutamate from glutamate and acetyl-CoA; bifunctional argininosuccinate lyase/N-acetylglutamate synthase 293604..295484 Psychromonas ingrahamii 37 4625792 YP_941699.1 CDS Ping_0233 NC_008709.1 295533 296072 R KEGG: shm:Shewmr7_0037 carbonic anhydrase, family 3; carbonic anhydrase complement(295533..296072) Psychromonas ingrahamii 37 4625793 YP_941700.1 CDS Ping_0234 NC_008709.1 302809 304059 D PFAM: phage integrase family protein; KEGG: son:SO1471 site-specific recombinase, phage integrase family; phage integrase family protein 302809..304059 Psychromonas ingrahamii 37 4625800 YP_941701.1 CDS Ping_0235 NC_008709.1 304283 304837 R hypothetical protein complement(304283..304837) Psychromonas ingrahamii 37 4625344 YP_941702.1 CDS Ping_0236 NC_008709.1 304922 305641 R hypothetical protein complement(304922..305641) Psychromonas ingrahamii 37 4625345 YP_941703.1 CDS Ping_0237 NC_008709.1 305755 306222 R hypothetical protein complement(305755..306222) Psychromonas ingrahamii 37 4625346 YP_941704.1 CDS Ping_0238 NC_008709.1 306307 307245 R PFAM: protein of unknown function DUF511; KEGG: rso:RSc0886 hypothetical protein; hypothetical protein complement(306307..307245) Psychromonas ingrahamii 37 4625347 YP_941705.1 CDS Ping_0239 NC_008709.1 307385 307978 R hypothetical protein complement(307385..307978) Psychromonas ingrahamii 37 4625348 YP_941706.1 CDS Ping_0240 NC_008709.1 308098 308970 R KEGG: hch:HCH_04427 hypothetical protein; hypothetical protein complement(308098..308970) Psychromonas ingrahamii 37 4625349 YP_941707.1 CDS Ping_0241 NC_008709.1 309481 310512 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cps:CPS_0377 ISCps1, transposase; transposase IS116/IS110/IS902 family protein 309481..310512 Psychromonas ingrahamii 37 4625350 YP_941708.1 CDS Ping_0242 NC_008709.1 311828 312040 D PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV0810 predicted transcriptional regulator; phage transcriptional regulator AlpA 311828..312040 Psychromonas ingrahamii 37 4625351 YP_941709.1 CDS Ping_0243 NC_008709.1 312326 312550 D PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV2250 predicted transcriptional regulator; phage transcriptional regulator AlpA 312326..312550 Psychromonas ingrahamii 37 4625352 YP_941710.1 CDS Ping_0244 NC_008709.1 312718 313293 D KEGG: son:SO0390.1 hypothetical protein; hypothetical protein 312718..313293 Psychromonas ingrahamii 37 4625353 YP_941711.1 CDS Ping_0245 NC_008709.1 313396 314163 D KEGG: yps:YPTB1810 putative small subunit bacteriophage terminase; cell-division initiation protein DivIVA 313396..314163 Psychromonas ingrahamii 37 4625354 YP_941712.1 CDS Ping_0246 NC_008709.1 314355 314894 D PFAM: Resolvase, N-terminal domain; KEGG: gsu:GSU1711 integrative genetic element Gsu5, resolvase; resolvase domain-containing protein 314355..314894 Psychromonas ingrahamii 37 4625355 YP_941713.1 CDS Ping_0247 NC_008709.1 315442 315696 D hypothetical protein 315442..315696 Psychromonas ingrahamii 37 4625356 YP_941714.1 CDS Ping_0248 NC_008709.1 315743 325579 D PFAM: PKD domain containing protein; Hemolysin-type calcium-binding region; Thrombospondin type 3 repeat; Fibronectin, type III domain protein; KEGG: son:SO4025 OmpA-like transmembrane domain protein; PKD domain-containing protein 315743..325579 Psychromonas ingrahamii 37 4625357 YP_941715.1 CDS Ping_0249 NC_008709.1 326560 327123 D PFAM: Phosphoglycerate mutase; KEGG: pub:SAR11_0874 phosphoglycerate mutase family; phosphoglycerate mutase 326560..327123 Psychromonas ingrahamii 37 4625358 YP_941716.1 CDS Ping_0250 NC_008709.1 327467 327748 R hypothetical protein complement(327467..327748) Psychromonas ingrahamii 37 4625359 YP_941717.1 CDS Ping_0251 NC_008709.1 328062 328451 R hypothetical protein complement(328062..328451) Psychromonas ingrahamii 37 4625360 YP_941718.1 CDS Ping_0252 NC_008709.1 328931 329404 R PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_567 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 complement(328931..329404) Psychromonas ingrahamii 37 4625361 YP_941719.1 CDS Ping_0253 NC_008709.1 329821 330783 R KEGG: cps:CPS_3964 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase complement(329821..330783) Psychromonas ingrahamii 37 4625362 YP_941720.1 CDS Ping_0254 NC_008709.1 331406 332098 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: par:Psyc_0419 hypothetical protein; type 11 methyltransferase 331406..332098 Psychromonas ingrahamii 37 4626641 YP_941721.1 CDS Ping_0255 NC_008709.1 332086 333144 D PFAM: FAD dependent oxidoreductase; KEGG: par:Psyc_0420 hypothetical protein; FAD dependent oxidoreductase 332086..333144 Psychromonas ingrahamii 37 4626642 YP_941722.1 CDS Ping_0256 NC_008709.1 333141 334229 R PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: par:Psyc_0421 possible chalcone synthase; naringenin-chalcone synthase complement(333141..334229) Psychromonas ingrahamii 37 4626643 YP_941723.1 CDS Ping_0257 NC_008709.1 334620 337346 D KEGG: pfa:PF13_0146 hypothetical protein; hypothetical protein 334620..337346 Psychromonas ingrahamii 37 4626644 YP_941724.1 CDS Ping_0258 NC_008709.1 337553 338977 R KEGG: lpp:lpp1568 phospholipase; phospholipase complement(337553..338977) Psychromonas ingrahamii 37 4626645 YP_941725.1 CDS Ping_0259 NC_008709.1 339014 339340 D hypothetical protein 339014..339340 Psychromonas ingrahamii 37 4626646 YP_941726.1 CDS Ping_0260 NC_008709.1 339696 341531 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; KEGG: sde:Sde_3939 response regulator receiver domain protein (CheY-like); diguanylate cyclase complement(339696..341531) Psychromonas ingrahamii 37 4626647 YP_941727.1 CDS Ping_0261 NC_008709.1 341934 342392 D KEGG: pha:PSHAb0027 Peyer's patch-specific virulence factor GipA (transposase); transposase 341934..342392 Psychromonas ingrahamii 37 4626648 YP_941728.1 CDS Ping_0262 NC_008709.1 343179 343451 D KEGG: sfr:Sfri_1546 hypothetical protein; hypothetical protein 343179..343451 Psychromonas ingrahamii 37 4626649 YP_941729.1 CDS Ping_0263 NC_008709.1 343463 345181 D PFAM: Na+/solute symporter; KEGG: sfr:Sfri_1547 Na+/solute symporter; Na+/solute symporter 343463..345181 Psychromonas ingrahamii 37 4626650 YP_941730.1 CDS Ping_0264 NC_008709.1 345301 347145 D PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: shm:Shewmr7_1582 cyclic nucleotide-binding protein; signal protein 345301..347145 Psychromonas ingrahamii 37 4626651 YP_941731.1 CDS Ping_0265 NC_008709.1 347145 347831 D PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: she:Shewmr4_1516 exonuclease, RNase T and DNA polymerase III; exonuclease 347145..347831 Psychromonas ingrahamii 37 4626652 YP_941732.1 CDS Ping_0266 NC_008709.1 347926 348807 R KEGG: pat:Patl_2401 hypothetical protein; outer membrane protein complement(347926..348807) Psychromonas ingrahamii 37 4626653 YP_941733.1 CDS Ping_0268 NC_008709.1 349324 350451 D PFAM: peptidase M14, carboxypeptidase A; KEGG: pcr:Pcryo_1240 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 349324..350451 Psychromonas ingrahamii 37 4626655 YP_941734.1 CDS Ping_0269 NC_008709.1 350646 350969 R KEGG: vpa:VPA1132 hypothetical protein; hypothetical protein complement(350646..350969) Psychromonas ingrahamii 37 4626656 YP_941735.1 CDS Ping_0270 NC_008709.1 351737 352102 D KEGG: eba:ebA3195 hypothetical protein; hypothetical protein 351737..352102 Psychromonas ingrahamii 37 4626657 YP_941736.1 CDS Ping_0271 NC_008709.1 352099 352572 D KEGG: bpm:BURPS1710b_A0492 Tat (twin-arginine translocation) pathway signal sequence domain protein; Tat pathway signal sequence domain-containing protein 352099..352572 Psychromonas ingrahamii 37 4626658 YP_941737.1 CDS Ping_0272 NC_008709.1 352591 354813 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: eba:ebA3193 putative oxidoreductase, FAD-binding; oxidoreductase FAD/NAD(P)-binding subunit 352591..354813 Psychromonas ingrahamii 37 4624523 YP_941738.1 CDS Ping_0273 NC_008709.1 355400 358636 D KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 355400..358636 Psychromonas ingrahamii 37 4624524 YP_941739.1 CDS Ping_0274 NC_008709.1 358840 359130 D KEGG: pen:PSEEN5015 hypothetical protein; hypothetical protein 358840..359130 Psychromonas ingrahamii 37 4624525 YP_941740.1 CDS Ping_0275 NC_008709.1 359814 360869 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bpm:BURPS1710b_0135 transcriptional regulator, AraC family; DNA-binding helix-turn-helix domain-containing transcriptional regulator protein complement(359814..360869) Psychromonas ingrahamii 37 4624526 YP_941741.1 CDS Ping_0276 NC_008709.1 361059 362459 D PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pat:Patl_1427 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit 361059..362459 Psychromonas ingrahamii 37 4624527 YP_941742.1 CDS Ping_0277 NC_008709.1 362456 363292 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 362456..363292 Psychromonas ingrahamii 37 4624528 YP_941743.1 CDS Ping_0278 NC_008709.1 363314 364705 D TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: hch:HCH_06322 amino acid transporters; ethanolamine transporter 363314..364705 Psychromonas ingrahamii 37 4624529 YP_941744.1 CDS Ping_0279 NC_008709.1 365395 365601 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3558 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(365395..365601) Psychromonas ingrahamii 37 4624530 YP_941745.1 CDS Ping_0280 NC_008709.1 366571 367218 R PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: vvy:VV1959 outer membrane protein; OmpA/MotB domain-containing protein complement(366571..367218) Psychromonas ingrahamii 37 4624531 YP_941746.1 CDS Ping_0281 NC_008709.1 367681 369108 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: shm:Shewmr7_3909 periplasmic sensor signal transduction histidine kinase; sensor histidine kinase complement(367681..369108) Psychromonas ingrahamii 37 4624532 YP_941747.1 CDS Ping_0282 NC_008709.1 369108 369800 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4647 DNA-binding response regulator; winged helix family two component transcriptional regulator complement(369108..369800) Psychromonas ingrahamii 37 4624533 YP_941748.1 CDS Ping_0283 NC_008709.1 369843 370109 R KEGG: sfr:Sfri_1133 propeptide, PepSY amd peptidase M4; hypothetical protein complement(369843..370109) Psychromonas ingrahamii 37 4624534 YP_941749.1 CDS Ping_0284 NC_008709.1 370730 371785 D TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: plu:plu2551 selenide, water dikinase (selenophosphate synthase) (selenium donnor protein); selenophosphate synthase 370730..371785 Psychromonas ingrahamii 37 4624535 YP_941750.1 CDS Ping_0285 NC_008709.1 371802 372899 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 371802..372899 Psychromonas ingrahamii 37 4624536 YP_941751.1 CDS Ping_0286 NC_008709.1 373016 374077 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 373016..374077 Psychromonas ingrahamii 37 4624537 YP_941752.1 CDS tyrA NC_008709.1 374087 375214 D catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 374087..375214 Psychromonas ingrahamii 37 4624538 YP_941753.1 CDS Ping_0288 NC_008709.1 375301 375711 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: yps:YPTB0844 putative sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(375301..375711) Psychromonas ingrahamii 37 4624539 YP_941754.1 CDS Ping_0289 NC_008709.1 376027 377847 D PFAM: extracellular solute-binding protein, family 5; KEGG: pae:PA1810 putative peptide transport system substrate-binding protein; ABC transporter extracellular solute-binding protein 376027..377847 Psychromonas ingrahamii 37 4624540 YP_941755.1 CDS Ping_0290 NC_008709.1 377847 378923 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA1809 putative peptide transport system permease protein; ABC transporter substrate binding inner membrane protein 377847..378923 Psychromonas ingrahamii 37 4624541 YP_941756.1 CDS Ping_0291 NC_008709.1 378925 379974 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA1808 putative peptide transport system permease protein; ABC transporter binding protein inner membrane protein 378925..379974 Psychromonas ingrahamii 37 4623710 YP_941757.1 CDS Ping_0292 NC_008709.1 379971 381563 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP_4150 peptide ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter ATP-binding protein 379971..381563 Psychromonas ingrahamii 37 4623711 YP_941758.1 CDS Ping_0293 NC_008709.1 381835 383748 D PFAM: Lytic transglycosylase, catalytic; KEGG: ppr:PBPRA0641 hypothetical soluble lytic murein transglycosylase; lytic transglycosylase 381835..383748 Psychromonas ingrahamii 37 4623712 YP_941759.1 CDS Ping_0294 NC_008709.1 383806 384207 R KEGG: tbd:Tbd_1865 pilus assembly protein; pilus assembly protein complement(383806..384207) Psychromonas ingrahamii 37 4623713 YP_941760.1 CDS Ping_0295 NC_008709.1 384448 384900 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(384448..384900) Psychromonas ingrahamii 37 4623714 YP_941761.1 CDS Ping_0296 NC_008709.1 385109 385891 D PFAM: extracellular solute-binding protein, family 3; KEGG: vpa:VPA0637 arginine ABC transporter, periplasmic arginine-binding protein; arginine ABC transporter solute-binding protein 385109..385891 Psychromonas ingrahamii 37 4623715 YP_941762.1 CDS Ping_0297 NC_008709.1 386153 387112 D oxidizes malate to oxaloacetate; malate dehydrogenase 386153..387112 Psychromonas ingrahamii 37 4623716 YP_941763.1 CDS Ping_0298 NC_008709.1 387379 388797 D TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ppr:PBPRA3312 putative siroheme synthase; bifunctional siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase/siroheme ferrochelatase/uroporphyrinogen methyltransferase 387379..388797 Psychromonas ingrahamii 37 4623717 YP_941764.1 CDS Ping_0299 NC_008709.1 388960 390234 R KEGG: son:SO1498 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase complement(388960..390234) Psychromonas ingrahamii 37 4623718 YP_941765.1 CDS Ping_0300 NC_008709.1 391237 395031 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(391237..395031) Psychromonas ingrahamii 37 4623719 YP_941766.1 CDS Ping_0301 NC_008709.1 395445 395825 D TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: wsu:WS0716 hypothetical protein; hypothetical protein 395445..395825 Psychromonas ingrahamii 37 4623720 YP_941767.1 CDS Ping_0302 NC_008709.1 395954 397510 R PFAM: helix-turn-helix domain protein; KEGG: shm:Shewmr7_3944 transcriptional regulator, XRE family; DNA-binding transcriptional regulator complement(395954..397510) Psychromonas ingrahamii 37 4623721 YP_941768.1 CDS Ping_0303 NC_008709.1 397705 399873 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 397705..399873 Psychromonas ingrahamii 37 4623722 YP_941769.1 CDS Ping_0304 NC_008709.1 399941 401536 D Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 399941..401536 Psychromonas ingrahamii 37 4623723 YP_941770.1 CDS Ping_0305 NC_008709.1 401986 403926 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: pat:Patl_3820 alpha amylase, catalytic region; alpha amylase 401986..403926 Psychromonas ingrahamii 37 4624882 YP_941771.1 CDS Ping_0306 NC_008709.1 404048 405133 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: wsu:WS1630 response regulator protein-CheY-like and an HD-GYP domain; metal dependent phosphohydrolase complement(404048..405133) Psychromonas ingrahamii 37 4624883 YP_941772.1 CDS Ping_0307 NC_008709.1 405342 406508 R PFAM: glucose sorbosone dehydrogenase; KEGG: xac:XAC3868 dehydrogenase; glucose sorbosone dehydrogenase complement(405342..406508) Psychromonas ingrahamii 37 4624884 YP_941773.1 CDS Ping_0308 NC_008709.1 406839 407258 R hypothetical protein complement(406839..407258) Psychromonas ingrahamii 37 4624885 YP_941774.1 CDS Ping_0309 NC_008709.1 407773 407985 R KEGG: sfr:Sfri_4031 membrane protein-like protein; hypothetical protein complement(407773..407985) Psychromonas ingrahamii 37 4624886 YP_941775.1 CDS rpoD NC_008709.1 409447 411300 R TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70, non-essential domain protein; sigma-70 region 1.2; KEGG: pat:Patl_1038 RNA polymerase, sigma 70 subunit, RpoD; RNA polymerase sigma-70 factor RpoD complement(409447..411300) Psychromonas ingrahamii 37 4624888 YP_941776.1 CDS Ping_0311 NC_008709.1 411412 413163 R KEGG: vvy:VV0562 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase DnaG, DnaB-binding; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase complement(411412..413163) Psychromonas ingrahamii 37 4624889 YP_941777.1 CDS Ping_0312 NC_008709.1 413377 413820 R PFAM: GatB/Yqey domain protein; KEGG: vpa:VP0406 hypothetical protein; GatB/Yqey domain-containing protein complement(413377..413820) Psychromonas ingrahamii 37 4624890 YP_941778.1 CDS Ping_0313 NC_008709.1 413854 414069 R PFAM: ribosomal protein S21; KEGG: ppr:PBPRA0433 putative ribosomal protein S21; 30S ribosomal protein S21 complement(413854..414069) Psychromonas ingrahamii 37 4624891 YP_941779.1 CDS gcp NC_008709.1 414336 415361 D KEGG: sfr:Sfri_2992 putative metalloendopeptidase, glycoprotease family protein; TIGRFAM: putative metalloendopeptidase, glycoprotease family; PFAM: peptidase M22, glycoprotease; O-sialoglycoprotein endopeptidase Gcp 414336..415361 Psychromonas ingrahamii 37 4624892 YP_941780.1 CDS Ping_0315 NC_008709.1 415578 416621 D KEGG: sec:SC0620 ferric enterobactin (enterochelin) transporter; chain length determinant protein-like protein 415578..416621 Psychromonas ingrahamii 37 4624893 YP_941781.1 CDS Ping_0316 NC_008709.1 416727 417734 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(416727..417734) Psychromonas ingrahamii 37 4624894 YP_941782.1 CDS Ping_0317 NC_008709.1 417747 418544 R PFAM: TatD-related deoxyribonuclease; KEGG: cps:CPS_0167 deoxyribonuclease TatD; TatD-related deoxyribonuclease complement(417747..418544) Psychromonas ingrahamii 37 4624895 YP_941783.1 CDS Ping_0318 NC_008709.1 418551 419327 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: ppr:PBPRA0121 sec-independent protein translocase protein TatC; Sec-independent protein translocase subunit TatC complement(418551..419327) Psychromonas ingrahamii 37 4624896 YP_941784.1 CDS Ping_0319 NC_008709.1 419324 419734 R TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: ppr:PBPRA0120 sec-independent protein translocase protein TatB; twin-arginine translocation protein subunit TatB complement(419324..419734) Psychromonas ingrahamii 37 4624897 YP_941785.1 CDS Ping_0320 NC_008709.1 419759 420025 R TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: cps:CPS_0163 Sec-independent protein translocase protein TatA; twin arginine-targeting protein translocase complement(419759..420025) Psychromonas ingrahamii 37 4624898 YP_941786.1 CDS Ping_0321 NC_008709.1 420083 421723 R TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: vvy:VV0179 putative ubiquinone biosynthesis protein AarF; 2-polyprenylphenol 6-hydroxylase complement(420083..421723) Psychromonas ingrahamii 37 4624899 YP_941787.1 CDS Ping_0322 NC_008709.1 421720 422352 R PFAM: protein of unknown function DUF1243; KEGG: vpa:VP0096 conserved hypothetical protein; hypothetical protein complement(421720..422352) Psychromonas ingrahamii 37 4624900 YP_941788.1 CDS Ping_0323 NC_008709.1 422433 423188 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: vfi:VF0046 ubiquinone/menaquinone biosynthesis methyltransferase UbiE; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD complement(422433..423188) Psychromonas ingrahamii 37 4624763 YP_941789.1 CDS Ping_0324 NC_008709.1 423677 425329 D PFAM: phosphoglucose isomerase (PGI); KEGG: vfi:VF0304 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 423677..425329 Psychromonas ingrahamii 37 4624764 YP_941790.1 CDS Ping_0325 NC_008709.1 425409 426062 R KEGG: hin:HI1244 hypothetical protein; exopolysaccharide biosynthesis protein-like protein complement(425409..426062) Psychromonas ingrahamii 37 4624765 YP_941791.1 CDS Ping_0326 NC_008709.1 426043 426852 R PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: vch:VC0234 hypothetical protein; glycosyl transferase family protein complement(426043..426852) Psychromonas ingrahamii 37 4624766 YP_941792.1 CDS Ping_0327 NC_008709.1 427050 428069 D PFAM: glycosyl transferase, family 9; KEGG: vch:VC0223 ADP-heptose--LPS heptosyltransferase II, putative; glycosyl transferase family protein 427050..428069 Psychromonas ingrahamii 37 4624767 YP_941793.1 CDS Ping_0328 NC_008709.1 428118 428891 R PFAM: glycosyl transferase, family 2; KEGG: vch:VC0224 lipopolysaccharide biosynthesis glycosyltransferase, putative; glycosyl transferase family protein complement(428118..428891) Psychromonas ingrahamii 37 4624768 YP_941794.1 CDS Ping_0329 NC_008709.1 428896 429942 R PFAM: glycosyl transferase, family 9; KEGG: vvu:VV10816 ADP-heptose:LPS heptosyltransferase; glycosyl transferase family protein complement(428896..429942) Psychromonas ingrahamii 37 4624769 YP_941795.1 CDS Ping_0330 NC_008709.1 430068 430763 D catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 430068..430763 Psychromonas ingrahamii 37 4624968 YP_941796.1 CDS Ping_0331 NC_008709.1 430809 431645 R PFAM: glycosyl transferase, family 2; KEGG: vvy:VV0299 putative glycosyl transferase; glycosyl transferase family protein complement(430809..431645) Psychromonas ingrahamii 37 4624969 YP_941797.1 CDS Ping_0332 NC_008709.1 431801 433045 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: ppr:PBPRA0211 hypothetical KDO transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(431801..433045) Psychromonas ingrahamii 37 4624970 YP_941798.1 CDS Ping_0333 NC_008709.1 433046 434296 R PFAM: O-antigen polymerase; KEGG: msu:MS0243 RfaL protein; O-antigen polymerase complement(433046..434296) Psychromonas ingrahamii 37 4624971 YP_941799.1 CDS Ping_0334 NC_008709.1 434303 435334 R TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; KEGG: pfo:Pfl_0465 lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II complement(434303..435334) Psychromonas ingrahamii 37 4624972 YP_941800.1 CDS Ping_0335 NC_008709.1 435349 436284 R TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: vch:VC0240 ADP-L-glycero-D-mannoheptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase complement(435349..436284) Psychromonas ingrahamii 37 4624973 YP_941801.1 CDS Ping_0336 NC_008709.1 436339 437538 D PFAM: glycosyl transferase, group 1; KEGG: csa:Csal_0013 glycosyl transferase, group 1; group 1 glycosyl transferase 436339..437538 Psychromonas ingrahamii 37 4624974 YP_941802.1 CDS Ping_0337 NC_008709.1 438215 438517 D PFAM: Rhodanese domain protein; KEGG: ecp:ECP_3510 thiosulfate sulfurtransferase GlpE; thiosulfate:cyanide sulfurtransferase 438215..438517 Psychromonas ingrahamii 37 4624975 YP_941803.1 CDS Ping_0338 NC_008709.1 438671 439021 D KEGG: shm:Shewmr7_2737 hypothetical protein; hypothetical protein 438671..439021 Psychromonas ingrahamii 37 4624976 YP_941804.1 CDS Ping_0339 NC_008709.1 439294 441297 D KEGG: pha:PSHAa0671 transketolase 1 (TK 1); TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase 439294..441297 Psychromonas ingrahamii 37 4626716 YP_941805.1 CDS Ping_0340 NC_008709.1 441616 442032 D cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 441616..442032 Psychromonas ingrahamii 37 4626717 YP_941806.1 CDS Ping_0341 NC_008709.1 442059 443564 D with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 442059..443564 Psychromonas ingrahamii 37 4626718 YP_941807.1 CDS rbsC NC_008709.1 443561 444535 D functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 443561..444535 Psychromonas ingrahamii 37 4626719 YP_941808.1 CDS Ping_0343 NC_008709.1 444606 445484 D periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 444606..445484 Psychromonas ingrahamii 37 4626720 YP_941809.1 CDS Ping_0344 NC_008709.1 445648 446574 D catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 445648..446574 Psychromonas ingrahamii 37 4626721 YP_941810.1 CDS Ping_0345 NC_008709.1 446599 447603 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ppr:PBPRB1561 putative ribose operon repressor, rbsR; transcriptional regulator for D-ribose, periplasmic binding protein, LacI family protein 446599..447603 Psychromonas ingrahamii 37 4626722 YP_941811.1 CDS Ping_0346 NC_008709.1 447662 449500 R KEGG: vfi:VF2559 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(447662..449500) Psychromonas ingrahamii 37 4626723 YP_941812.1 CDS Ping_0347 NC_008709.1 449659 449916 R PFAM: amino acid-binding ACT domain protein; KEGG: vfi:VF2557 acetolactate synthase small subunit; amino acid-binding ACT domain-containing protein complement(449659..449916) Psychromonas ingrahamii 37 4626724 YP_941813.1 CDS Ping_0348 NC_008709.1 449913 451559 R catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit complement(449913..451559) Psychromonas ingrahamii 37 4626725 YP_941814.1 CDS Ping_0350 NC_008709.1 452767 453609 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(452767..453609) Psychromonas ingrahamii 37 4626727 YP_941815.1 CDS Ping_0351 NC_008709.1 453637 454434 R PFAM: alpha/beta hydrolase fold; KEGG: pmu:PM0055 hypothetical HI0282; alpha/beta hydrolase fold protein complement(453637..454434) Psychromonas ingrahamii 37 4626728 YP_941816.1 CDS Ping_0352 NC_008709.1 454421 456166 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(454421..456166) Psychromonas ingrahamii 37 4626729 YP_941817.1 CDS Ping_0355 NC_008709.1 456785 458083 R TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: son:SO4713 menaquinone-specific isochorismate synthase, putative; isochorismate synthase complement(456785..458083) Psychromonas ingrahamii 37 4626732 YP_941818.1 CDS Ping_0356 NC_008709.1 458186 459100 D TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: spt:SPA3933 menaquinone biosynthetic protein; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 458186..459100 Psychromonas ingrahamii 37 4626733 YP_941819.1 CDS Ping_0357 NC_008709.1 459328 461424 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 459328..461424 Psychromonas ingrahamii 37 4624141 YP_941820.1 CDS Ping_0359 NC_008709.1 462003 462164 D KEGG: cps:CPS_0875 translation elongation factor G; hypothetical protein 462003..462164 Psychromonas ingrahamii 37 4624143 YP_941821.1 CDS Ping_0360 NC_008709.1 462610 464580 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 462610..464580 Psychromonas ingrahamii 37 4624144 YP_941822.1 CDS Ping_0361 NC_008709.1 464642 466144 D KEGG: pha:PSHAa0484 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; thiamine-phosphate pyrophosphorylase 464642..466144 Psychromonas ingrahamii 37 4624145 YP_941823.1 CDS Ping_0362 NC_008709.1 466213 466965 D PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: plu:plu0484 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein; adenylyl transferase 466213..466965 Psychromonas ingrahamii 37 4624146 YP_941824.1 CDS Ping_0363 NC_008709.1 466962 467162 D TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: plu:plu0483 thiS protein; thiamine biosynthesis protein ThiS 466962..467162 Psychromonas ingrahamii 37 4624147 YP_941825.1 CDS thiG NC_008709.1 467169 467966 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 467169..467966 Psychromonas ingrahamii 37 4624148 YP_941826.1 CDS Ping_0365 NC_008709.1 467974 469092 D TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; KEGG: ppr:PBPRA0110 putative ThiH protein; thiazole biosynthesis protein ThiH 467974..469092 Psychromonas ingrahamii 37 4624149 YP_941827.1 CDS Ping_0366 NC_008709.1 469123 469509 D KEGG: ppr:PBPRA1236 hypothetical protein; hypothetical protein 469123..469509 Psychromonas ingrahamii 37 4624150 YP_941828.1 CDS Ping_0367 NC_008709.1 469549 470196 R PFAM: Lytic transglycosylase, catalytic; KEGG: mca:MCA2008 transglycosylase SLT domain protein; lytic transglycosylase complement(469549..470196) Psychromonas ingrahamii 37 4624151 YP_941829.1 CDS Ping_0368 NC_008709.1 470242 471981 R PFAM: O-antigen polymerase; KEGG: ppr:PBPRA3291 hypothetical protein; O-antigen polymerase complement(470242..471981) Psychromonas ingrahamii 37 4624152 YP_941830.1 CDS Ping_0369 NC_008709.1 472044 474881 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: vch:VC0394 excinuclease ABC, subunit A; excinuclease ABC subunit A complement(472044..474881) Psychromonas ingrahamii 37 4624153 YP_941831.1 CDS pgk NC_008709.1 476362 477534 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 476362..477534 Psychromonas ingrahamii 37 4624155 YP_941832.1 CDS Ping_0372 NC_008709.1 477695 478771 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 477695..478771 Psychromonas ingrahamii 37 4624156 YP_941833.1 CDS Ping_0373 NC_008709.1 478921 479610 D PFAM: protein of unknown function DUF541; KEGG: yps:YPTB3192 hypothetical protein; hypothetical protein 478921..479610 Psychromonas ingrahamii 37 4624157 YP_941834.1 CDS Ping_0374 NC_008709.1 479611 480441 R PFAM: S-adenosylmethionine decarboxylase; KEGG: sdn:Sden_2279 adenosylmethionine decarboxylase; S-adenosylmethionine decarboxylase complement(479611..480441) Psychromonas ingrahamii 37 4624177 YP_941835.1 CDS Ping_0375 NC_008709.1 481571 481840 R PFAM: Fe(II) trafficking protein YggX; KEGG: msu:MS0316 hypothetical protein; hypothetical protein complement(481571..481840) Psychromonas ingrahamii 37 4624181 YP_941836.1 CDS Ping_0376 NC_008709.1 481833 482909 R TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; KEGG: son:SO3368 A/G-specific adenine glycosylase; A/G-specific adenine glycosylase complement(481833..482909) Psychromonas ingrahamii 37 4624182 YP_941837.1 CDS Ping_0377 NC_008709.1 483088 483819 D KEGG: pat:Patl_0078 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 483088..483819 Psychromonas ingrahamii 37 4624183 YP_941838.1 CDS Ping_0378 NC_008709.1 484338 485624 D PFAM: stress protein; protein of unknown function DUF450; KEGG: bur:Bcep18194_B0270 stress protein; stress protein, tellurium resistance TerD 484338..485624 Psychromonas ingrahamii 37 4624184 YP_941839.1 CDS Ping_0379 NC_008709.1 485881 486351 R PFAM: 17 kDa surface antigen; KEGG: pca:Pcar_2748 17 kD surface antigen precursor; 17 kDa surface antigen complement(485881..486351) Psychromonas ingrahamii 37 4624185 YP_941840.1 CDS Ping_0380 NC_008709.1 486812 487135 D KEGG: cps:CPS_3092 hypothetical protein; hypothetical protein 486812..487135 Psychromonas ingrahamii 37 4624186 YP_941841.1 CDS Ping_0381 NC_008709.1 487639 487956 D PFAM: protein of unknown function DUF74; KEGG: cps:CPS_2458 hypothetical protein; hypothetical protein 487639..487956 Psychromonas ingrahamii 37 4624187 YP_941842.1 CDS Ping_0382 NC_008709.1 487982 488350 D KEGG: ppr:PBPRB1752 hypothetical protein; hypothetical protein 487982..488350 Psychromonas ingrahamii 37 4624188 YP_941843.1 CDS Ping_0383 NC_008709.1 488626 489060 D KEGG: ana:alr7544 hypothetical protein; hypothetical protein 488626..489060 Psychromonas ingrahamii 37 4624189 YP_941844.1 CDS Ping_0384 NC_008709.1 489368 490276 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: vpa:VP0093 hypothetical protein; hypothetical protein 489368..490276 Psychromonas ingrahamii 37 4624190 YP_941845.1 CDS tbpA NC_008709.1 490823 491821 D part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 490823..491821 Psychromonas ingrahamii 37 4624191 YP_941846.1 CDS thiP NC_008709.1 491835 493439 D permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 491835..493439 Psychromonas ingrahamii 37 4624192 YP_941847.1 CDS Ping_0387 NC_008709.1 493572 494282 D KEGG: vvy:VV0439 thiamine ABC transporter, ATP-binding protein; TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; PFAM: ABC transporter related; SMART: AAA ATPase; thiamin ABC transporter ATP-binding protein 493572..494282 Psychromonas ingrahamii 37 4624193 YP_941848.1 CDS Ping_0388 NC_008709.1 494356 494994 R complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein complement(494356..494994) Psychromonas ingrahamii 37 4624194 YP_941849.1 CDS Ping_0389 NC_008709.1 495244 495471 R PFAM: protein of unknown function UPF0270; KEGG: pha:PSHAa2909 hypothetical protein; hypothetical protein complement(495244..495471) Psychromonas ingrahamii 37 4624195 YP_941850.1 CDS Ping_0390 NC_008709.1 495945 496574 D PFAM: carbonic anhydrase; KEGG: pst:PSPTO_0994 carbonic anhydrase; carbonate dehydratase 495945..496574 Psychromonas ingrahamii 37 4624290 YP_941851.1 CDS Ping_0391 NC_008709.1 496655 496960 D PFAM: cytochrome c, class I; KEGG: vfi:VF1943 cytochrome c-554(548); cytochrome c, class I 496655..496960 Psychromonas ingrahamii 37 4624291 YP_941852.1 CDS Ping_0392 NC_008709.1 497259 498773 D KEGG: vvy:VV3239 ComM-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 497259..498773 Psychromonas ingrahamii 37 4624292 YP_941853.1 CDS Ping_0393 NC_008709.1 498911 501769 R TIGRFAM: valyl-tRNA synthetase; KEGG: vch:VC2503 valyl-tRNA synthetase; valyl-tRNA synthetase complement(498911..501769) Psychromonas ingrahamii 37 4624293 YP_941854.1 CDS Ping_0394 NC_008709.1 501773 502255 R PFAM: DNA polymerase III chi subunit, HolC; KEGG: cps:CPS_0739 DNA polymerase III, chi subunit; DNA polymerase III chi subunit, HolC complement(501773..502255) Psychromonas ingrahamii 37 4624294 YP_941855.1 CDS Ping_0395 NC_008709.1 502270 503784 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(502270..503784) Psychromonas ingrahamii 37 4624295 YP_941856.1 CDS Ping_0396 NC_008709.1 504058 505134 D PFAM: permease YjgP/YjgQ family protein; KEGG: vch:VC2500 hypothetical protein; YjgP/YjgQ family permease 504058..505134 Psychromonas ingrahamii 37 4624296 YP_941857.1 CDS Ping_0397 NC_008709.1 505166 506230 D PFAM: permease YjgP/YjgQ family protein; KEGG: sgl:SG2107 putative transport protein; YjgP/YjgQ family permease 505166..506230 Psychromonas ingrahamii 37 4624297 YP_941858.1 CDS Ping_0398 NC_008709.1 506338 506892 R PFAM: RDD domain containing protein; KEGG: ppr:PBPRA0490 hypothetical protein; RDD domain-containing protein complement(506338..506892) Psychromonas ingrahamii 37 4624298 YP_941859.1 CDS Ping_0399 NC_008709.1 507325 508338 D PFAM: phage integrase family protein; KEGG: lpp:lpp2123 hypothetical protein; phage integrase family protein 507325..508338 Psychromonas ingrahamii 37 4624300 YP_941860.1 CDS Ping_0400 NC_008709.1 508331 509032 D carbonic anhydrase 508331..509032 Psychromonas ingrahamii 37 4624301 YP_941861.1 CDS Ping_0401 NC_008709.1 509521 509814 D hypothetical protein 509521..509814 Psychromonas ingrahamii 37 4624302 YP_941862.1 CDS Ping_0402 NC_008709.1 509817 510254 D KEGG: sgl:SG0932 hypothetical protein; hypothetical protein 509817..510254 Psychromonas ingrahamii 37 4624303 YP_941863.1 CDS Ping_0403 NC_008709.1 510574 511599 D hypothetical protein 510574..511599 Psychromonas ingrahamii 37 4624304 YP_941864.1 CDS Ping_0404 NC_008709.1 511596 512891 D KEGG: mxa:MXAN_1209 virulence-associated protein E domain protein; P-loop ATPase and inactivated derivatives-like protein 511596..512891 Psychromonas ingrahamii 37 4624305 YP_941865.1 CDS Ping_0405 NC_008709.1 513326 514534 D PFAM: phage integrase family protein; KEGG: son:SO2978 prophage LambdaSo, site-specific recombinase, phage integrase family; phage integrase family protein 513326..514534 Psychromonas ingrahamii 37 4623821 YP_941866.1 CDS Ping_0406 NC_008709.1 514689 515459 D KEGG: yps:YPTB1810 putative small subunit bacteriophage terminase; hypothetical protein 514689..515459 Psychromonas ingrahamii 37 4623822 YP_941867.1 CDS Ping_0407 NC_008709.1 516310 516822 D hypothetical protein 516310..516822 Psychromonas ingrahamii 37 4623823 YP_941868.1 CDS Ping_0408 NC_008709.1 516904 517845 R hypothetical protein complement(516904..517845) Psychromonas ingrahamii 37 4623824 YP_941869.1 CDS Ping_0409 NC_008709.1 518486 519268 R dipeptidase complement(518486..519268) Psychromonas ingrahamii 37 4623825 YP_941870.1 CDS Ping_0410 NC_008709.1 520183 522501 D PFAM: peptidase domain protein; PGAP1 family protein; KEGG: sfr:Sfri_3642 peptidase domain protein; peptidase domain-containing protein 520183..522501 Psychromonas ingrahamii 37 4623826 YP_941871.1 CDS Ping_0411 NC_008709.1 522498 523562 D KEGG: sfr:Sfri_3641 hypothetical protein; hypothetical protein 522498..523562 Psychromonas ingrahamii 37 4623827 YP_941872.1 CDS Ping_0412 NC_008709.1 524283 525062 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1463 polar amino acid transport system ATP-binding protein; amino acid ABC transporter ATP-binding protein complement(524283..525062) Psychromonas ingrahamii 37 4623828 YP_941873.1 CDS Ping_0413 NC_008709.1 525055 525708 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1062 ABC polar amino acid family transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein complement(525055..525708) Psychromonas ingrahamii 37 4623829 YP_941874.1 CDS Ping_0414 NC_008709.1 525708 526358 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1063 ABC polar amino acid family transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane protein complement(525708..526358) Psychromonas ingrahamii 37 4623830 YP_941875.1 CDS Ping_0415 NC_008709.1 526404 527234 R PFAM: extracellular solute-binding protein, family 3; KEGG: bxe:Bxe_B1064 ABC polar amino acid family transporter, periplasmic ligand binding protein; ABC transporter extracellular solute-binding protein complement(526404..527234) Psychromonas ingrahamii 37 4623831 YP_941876.1 CDS Ping_0416 NC_008709.1 527278 527709 R PFAM: Endoribonuclease L-PSP; KEGG: bja:blr4467 hypothetical protein; endoribonuclease L-PSP complement(527278..527709) Psychromonas ingrahamii 37 4623832 YP_941877.1 CDS Ping_0417 NC_008709.1 527757 529070 R PFAM: Amidase; KEGG: mlo:mlr7070 glutamyl-tRNA(Gln) amidotransferase subunit A; amidase complement(527757..529070) Psychromonas ingrahamii 37 4623833 YP_941878.1 CDS Ping_0418 NC_008709.1 529139 529501 D PFAM: regulatory protein, LysR; KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family; LysR family transcriptional regulator 529139..529501 Psychromonas ingrahamii 37 4623834 YP_941879.1 CDS Ping_0419 NC_008709.1 529498 530031 D KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family; LysR family transcriptional regulator 529498..530031 Psychromonas ingrahamii 37 4623835 YP_941880.1 CDS Ping_0421 NC_008709.1 531327 532346 R KEGG: chu:CHU_2783 hypothetical protein; hypothetical protein complement(531327..532346) Psychromonas ingrahamii 37 4623837 YP_941881.1 CDS Ping_0422 NC_008709.1 532509 533069 R 2-deoxy-D-gluconate 3-dehydrogenase complement(532509..533069) Psychromonas ingrahamii 37 4623838 YP_941882.1 CDS Ping_0423 NC_008709.1 533703 536345 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sde:Sde_0178 hypothetical protein; hypothetical protein complement(533703..536345) Psychromonas ingrahamii 37 4623839 YP_941883.1 CDS Ping_0424 NC_008709.1 536389 537744 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: sde:Sde_0749 response regulator receiver domain protein (CheY-like); Fis family two component sigma-54 specific transcriptional regulator protein complement(536389..537744) Psychromonas ingrahamii 37 4625437 YP_941884.1 CDS Ping_0425 NC_008709.1 537770 539167 R KEGG: sde:Sde_0134 hypothetical protein; hypothetical protein complement(537770..539167) Psychromonas ingrahamii 37 4625438 YP_941885.1 CDS Ping_0426 NC_008709.1 539175 539927 R KEGG: hch:HCH_02717 putative polysaccharide biosynthesis protein; putative polysaccharide biosynthesis protein complement(539175..539927) Psychromonas ingrahamii 37 4625439 YP_941886.1 CDS Ping_0427 NC_008709.1 539924 541489 R KEGG: sde:Sde_0133 uncharacterized protein involved in exopolysaccharide biosynthesis-like; uexopolysaccharide biosynthesis-like protein complement(539924..541489) Psychromonas ingrahamii 37 4625440 YP_941887.1 CDS Ping_0428 NC_008709.1 541492 542100 R PFAM: polysaccharide export protein; KEGG: sde:Sde_0132 putative polysaccharide export protein, outer membrane; polysaccharide export protein complement(541492..542100) Psychromonas ingrahamii 37 4625441 YP_941888.1 CDS Ping_0429 NC_008709.1 542150 544222 R TIGRFAM: histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sde:Sde_0750 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(542150..544222) Psychromonas ingrahamii 37 4625442 YP_941889.1 CDS wecC NC_008709.1 544307 545557 R catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase complement(544307..545557) Psychromonas ingrahamii 37 4625443 YP_941890.1 CDS Ping_0431 NC_008709.1 545606 546790 R PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ypn:YPN_0099 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(545606..546790) Psychromonas ingrahamii 37 4625444 YP_941891.1 CDS Ping_0432 NC_008709.1 547858 548982 D KEGG: mxa:MXAN_3233 hypothetical protein; cellulose biosynthesis protein CelD 547858..548982 Psychromonas ingrahamii 37 4625445 YP_941892.1 CDS Ping_0433 NC_008709.1 548990 550996 R PFAM: Heparinase II/III family protein; KEGG: aba:Acid345_3793 heparinase II/III-like; heparinase II/III family protein complement(548990..550996) Psychromonas ingrahamii 37 4625446 YP_941893.1 CDS Ping_0434 NC_008709.1 551005 552495 R TIGRFAM: eight transmembrane protein EpsH; Eight transmembrane protein EpsH; KEGG: net:Neut_0899 eight transmembrane protein EpsH; transmembrane protein EpsH complement(551005..552495) Psychromonas ingrahamii 37 4625447 YP_941894.1 CDS Ping_0436 NC_008709.1 553083 553886 D KEGG: rru:Rru_A1484 glycosyl transferase WecB/TagA/CpsF; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; UDP-N-acetyl-D-mannosamine transferase 553083..553886 Psychromonas ingrahamii 37 4625449 YP_941895.1 CDS Ping_0437 NC_008709.1 553911 554900 D KEGG: sme:SMb21237 putative enzyme, C-terminal domain similar to sulfotransferase protein; hypothetical protein 553911..554900 Psychromonas ingrahamii 37 4625450 YP_941896.1 CDS Ping_0438 NC_008709.1 554907 556457 D KEGG: mba:Mbar_B3744 hypothetical protein; transporter of NadC family protein 554907..556457 Psychromonas ingrahamii 37 4625451 YP_941897.1 CDS Ping_0439 NC_008709.1 556497 557720 D hypothetical protein 556497..557720 Psychromonas ingrahamii 37 4625452 YP_941898.1 CDS Ping_0440 NC_008709.1 557733 558944 D PFAM: glycosyl transferase, group 1; KEGG: pat:Patl_4007 glycosyl transferase, group 1; group 1 glycosyl transferase 557733..558944 Psychromonas ingrahamii 37 4625453 YP_941899.1 CDS Ping_0441 NC_008709.1 558946 560352 D KEGG: mac:MA1063 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 558946..560352 Psychromonas ingrahamii 37 4625454 YP_941900.1 CDS Ping_0442 NC_008709.1 560363 561781 D PFAM: O-antigen polymerase; O-antigen polymerase 560363..561781 Psychromonas ingrahamii 37 4625455 YP_941901.1 CDS Ping_0443 NC_008709.1 561904 563781 D PFAM: acyltransferase 3; KEGG: pat:Patl_1096 acyltransferase 3; acyltransferase 3 561904..563781 Psychromonas ingrahamii 37 4623624 YP_941902.1 CDS Ping_0445 NC_008709.1 564538 567300 R KEGG: gme:Gmet_3227 hypothetical protein; colicin uptake-like protein complement(564538..567300) Psychromonas ingrahamii 37 4623626 YP_941903.1 CDS Ping_0446 NC_008709.1 567551 568975 R hypothetical protein complement(567551..568975) Psychromonas ingrahamii 37 4623627 YP_941904.1 CDS Ping_0447 NC_008709.1 568965 569753 R KEGG: cgb:cg1672 polyprenol-phosphate-mannose synthase domain 1; dolichyl-phosphate beta-D-mannosyltransferase complement(568965..569753) Psychromonas ingrahamii 37 4623628 YP_941905.1 CDS Ping_0448 NC_008709.1 569828 571756 R hypothetical protein complement(569828..571756) Psychromonas ingrahamii 37 4623629 YP_941906.1 CDS Ping_0449 NC_008709.1 571753 572757 R PFAM: glycosyl transferase, family 2; KEGG: mca:MCA2193 glycosyl transferase, group 2 family; glycosyl transferase family protein complement(571753..572757) Psychromonas ingrahamii 37 4623630 YP_941907.1 CDS Ping_0450 NC_008709.1 572757 573893 R PFAM: FAD dependent oxidoreductase; KEGG: pub:SAR11_0547 D amino acid oxidase (DAO) family; FAD dependent oxidoreductase complement(572757..573893) Psychromonas ingrahamii 37 4623631 YP_941908.1 CDS Ping_0451 NC_008709.1 573897 574247 R PFAM: small multidrug resistance protein; KEGG: dsy:DSY2566 hypothetical protein; small multidrug resistance protein complement(573897..574247) Psychromonas ingrahamii 37 4623632 YP_941909.1 CDS Ping_0452 NC_008709.1 574249 575064 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rba:RB3239 probable D-tagatose 3-epimerase; xylose isomerase domain-containing protein complement(574249..575064) Psychromonas ingrahamii 37 4623633 YP_941910.1 CDS Ping_0453 NC_008709.1 575064 575846 R hypothetical protein complement(575064..575846) Psychromonas ingrahamii 37 4623634 YP_941911.1 CDS Ping_0454 NC_008709.1 576328 577482 D PFAM: glycosyl transferase, group 1; KEGG: bce:BC1535 glycosyltransferase; group 1 glycosyl transferase 576328..577482 Psychromonas ingrahamii 37 4623635 YP_941912.1 CDS Ping_0455 NC_008709.1 577536 578555 D PFAM: polysaccharide deacetylase; KEGG: mca:MCA0187 hypothetical protein; polysaccharide deacetylase 577536..578555 Psychromonas ingrahamii 37 4623636 YP_941913.1 CDS Ping_0456 NC_008709.1 578687 579808 D PFAM: glycosyl transferase, group 1; KEGG: son:SO4681 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 578687..579808 Psychromonas ingrahamii 37 4623637 YP_941914.1 CDS Ping_0457 NC_008709.1 579826 580971 D PFAM: glycosyl transferase, group 1; KEGG: pfu:PF0788 glycosyl transferase; group 1 glycosyl transferase 579826..580971 Psychromonas ingrahamii 37 4626734 YP_941915.1 CDS Ping_0458 NC_008709.1 581170 581916 D hypothetical protein 581170..581916 Psychromonas ingrahamii 37 4626735 YP_941916.1 CDS Ping_0459 NC_008709.1 582221 583657 D KEGG: gme:Gmet_2469 fibronectin, type III; hypothetical protein 582221..583657 Psychromonas ingrahamii 37 4626736 YP_941917.1 CDS Ping_0461 NC_008709.1 585001 586401 D PFAM: sugar transferase; KEGG: pha:PSHAa1783 UDP-glucose lipid carrier transferase; undecaprenyl-phosphate galactose phosphotransferase 585001..586401 Psychromonas ingrahamii 37 4626738 YP_941918.1 CDS Ping_0462 NC_008709.1 586501 586809 R hypothetical protein complement(586501..586809) Psychromonas ingrahamii 37 4626739 YP_941919.1 CDS Ping_0463 NC_008709.1 587411 588868 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 587411..588868 Psychromonas ingrahamii 37 4626740 YP_941920.1 CDS Ping_0464 NC_008709.1 589450 589851 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 589450..589851 Psychromonas ingrahamii 37 4626741 YP_941921.1 CDS Ping_0465 NC_008709.1 589874 590257 D TIGRFAM: F0F1-ATPase subunit, putative; KEGG: rfr:Rfer_1163 F0F1-ATPase subunit, putative; F0F1-ATPase subunit 589874..590257 Psychromonas ingrahamii 37 4626742 YP_941922.1 CDS Ping_0466 NC_008709.1 590259 590591 D KEGG: rfr:Rfer_1164 hypothetical protein; hypothetical protein 590259..590591 Psychromonas ingrahamii 37 4626743 YP_941923.1 CDS Ping_0467 NC_008709.1 590581 591282 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 590581..591282 Psychromonas ingrahamii 37 4626744 YP_941924.1 CDS Ping_0468 NC_008709.1 591305 591586 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 591305..591586 Psychromonas ingrahamii 37 4626745 YP_941925.1 CDS Ping_0469 NC_008709.1 591590 592456 D PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: rfr:Rfer_1167 H+-transporting two-sector ATPase, B/B' subunit; ATP synthase F0, H+-transporting two-sector ATPase B/B' subunit 591590..592456 Psychromonas ingrahamii 37 4626746 YP_941926.1 CDS Ping_0470 NC_008709.1 592449 594008 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 592449..594008 Psychromonas ingrahamii 37 4626747 YP_941927.1 CDS Ping_0471 NC_008709.1 594044 594931 D PFAM: H+-transporting two-sector ATPase, gamma subunit; KEGG: rfr:Rfer_1169 H+-transporting two-sector ATPase, gamma subunit; ATP synthase F1, H+-transporting two-sector ATPase gamma subunit 594044..594931 Psychromonas ingrahamii 37 4626748 YP_941928.1 CDS hlyD NC_008709.1 595092 596171 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3483 HlyD family secretion protein; secretion protein HlyD 595092..596171 Psychromonas ingrahamii 37 4626749 YP_941929.1 CDS Ping_0473 NC_008709.1 596591 599692 D PFAM: acriflavin resistance protein; KEGG: vfi:VF1581 acriflavin resistance plasma membrane protein; acriflavin resistance protein 596591..599692 Psychromonas ingrahamii 37 4626750 YP_941930.1 CDS Ping_0474 NC_008709.1 599980 601422 D PFAM: Citrate transporter; KEGG: shm:Shewmr7_3245 Na+/H+ antiporter; citrate transporter 599980..601422 Psychromonas ingrahamii 37 4626751 YP_941931.1 CDS Ping_0475 NC_008709.1 601668 602087 D PFAM: Fimbrial protein pilin; KEGG: neu:NE1308 fimbrial protein pilin:bacterial general secretion pathway protein H; fimbrial protein pilin 601668..602087 Psychromonas ingrahamii 37 4626752 YP_941932.1 CDS Ping_0476 NC_008709.1 602675 603100 D KEGG: shm:Shewmr7_3604 methylation site containing protein; methylation site containing protein 602675..603100 Psychromonas ingrahamii 37 4626856 YP_941933.1 CDS Ping_0477 NC_008709.1 603758 604204 D KEGG: pat:Patl_3344 prepilin-type cleavage/methylation; prepilin-type cleavage/methylation protein 603758..604204 Psychromonas ingrahamii 37 4626857 YP_941934.1 CDS Ping_0478 NC_008709.1 605080 605484 D KEGG: pha:PSHAa0384 prepilin peptidase dependent protein D; prepilin peptidase dependent protein D 605080..605484 Psychromonas ingrahamii 37 4626858 YP_941935.1 CDS Ping_0479 NC_008709.1 606497 606886 D KEGG: par:Psyc_0240 probable pilus assembly protein major pilin PilA; hypothetical protein 606497..606886 Psychromonas ingrahamii 37 4626859 YP_941936.1 CDS Ping_0480 NC_008709.1 606886 608574 D TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: she:Shewmr4_0420 type IV-A pilus assembly ATPase PilB; type IV-A pilus assembly ATPase PilB 606886..608574 Psychromonas ingrahamii 37 4626860 YP_941937.1 CDS pilC NC_008709.1 609052 610284 D PFAM: type II secretion system protein; KEGG: shm:Shewmr7_3606 type II secretion system protein; type II secretion system protein, type IV pilus biogenesis protein PilC 609052..610284 Psychromonas ingrahamii 37 4626861 YP_941938.1 CDS Ping_0483 NC_008709.1 610888 612108 R PFAM: EAL domain protein; response regulator receiver; KEGG: nmu:Nmul_A1555 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain); cyclic-di-GMP regulatory protein complement(610888..612108) Psychromonas ingrahamii 37 4626863 YP_941939.1 CDS Ping_0484 NC_008709.1 612158 615925 R KEGG: neu:NE0049 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor histidine kinase complement(612158..615925) Psychromonas ingrahamii 37 4626864 YP_941940.1 CDS Ping_0485 NC_008709.1 617024 617272 D KEGG: cps:CPS_2512 hypothetical protein; hypothetical protein 617024..617272 Psychromonas ingrahamii 37 4626865 YP_941941.1 CDS Ping_0486 NC_008709.1 618427 618660 D hypothetical protein 618427..618660 Psychromonas ingrahamii 37 4626866 YP_941942.1 CDS Ping_0487 NC_008709.1 618783 619382 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: dvu:DVU1638 hypothetical protein; NADPH-dependent FMN reductase 618783..619382 Psychromonas ingrahamii 37 4626867 YP_941943.1 CDS Ping_0488 NC_008709.1 619437 620663 R PFAM: ROK family protein; KEGG: plu:plu1315 N-acetylglucosamine repressor; ROK family protein complement(619437..620663) Psychromonas ingrahamii 37 4626868 YP_941944.1 CDS nagA NC_008709.1 620898 622031 R catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase complement(620898..622031) Psychromonas ingrahamii 37 4626869 YP_941945.1 CDS nagB NC_008709.1 622256 623056 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(622256..623056) Psychromonas ingrahamii 37 4626870 YP_941946.1 CDS Ping_0491 NC_008709.1 623506 624963 D TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: vfi:VF0808 PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component; PTS system N-acetylglucosamine-specific transporter subunit IIBC 623506..624963 Psychromonas ingrahamii 37 4626871 YP_941947.1 CDS Ping_0492 NC_008709.1 625231 626892 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 625231..626892 Psychromonas ingrahamii 37 4626872 YP_941948.1 CDS Ping_0494 NC_008709.1 627570 628697 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: psb:Psyr_2906 pilus retraction protein PilT; type II secretion system twitching motility protein 627570..628697 Psychromonas ingrahamii 37 4626874 YP_941949.1 CDS Ping_0495 NC_008709.1 630552 631271 R KEGG: vch:VC2233 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon complement(630552..631271) Psychromonas ingrahamii 37 4623401 YP_941950.1 CDS Ping_0496 NC_008709.1 631349 631870 D PFAM: ribonuclease H; KEGG: stm:STM0263 RNase HI, degrades RNA of DNA-RNA hybrids; ribonuclease H 631349..631870 Psychromonas ingrahamii 37 4623402 YP_941951.1 CDS Ping_0497 NC_008709.1 631839 632579 R PFAM: Methyltransferase type 11; KEGG: pha:PSHAa1965 S-adenosyl-L-methionine-dependent methyltransferase; type 11 methyltransferase complement(631839..632579) Psychromonas ingrahamii 37 4623403 YP_941952.1 CDS Ping_0498 NC_008709.1 632621 633391 D PFAM: beta-lactamase domain protein; KEGG: neu:NE0138 metallo-beta-lactamase superfamily; hydroxyacylglutathione hydrolase 632621..633391 Psychromonas ingrahamii 37 4623404 YP_941953.1 CDS Ping_0499 NC_008709.1 633551 635125 D PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: pha:PSHAa1967 lytic murein transglycosylase C, membrane-bound; lytic transglycosylase 633551..635125 Psychromonas ingrahamii 37 4623405 YP_941954.1 CDS Ping_0500 NC_008709.1 635193 635522 R KEGG: pat:Patl_2143 glycoside hydrolase, family 13-like; hypothetical protein complement(635193..635522) Psychromonas ingrahamii 37 4623406 YP_941955.1 CDS Ping_0501 NC_008709.1 635596 636270 R MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein complement(635596..636270) Psychromonas ingrahamii 37 4623407 YP_941956.1 CDS Ping_0502 NC_008709.1 636881 637426 D PFAM: NUDIX hydrolase; KEGG: vpa:VP0520 MutT/nudix family protein; nucleotide phosphate derivative pyrophosphohydrolase 636881..637426 Psychromonas ingrahamii 37 4623408 YP_941957.1 CDS Ping_0503 NC_008709.1 637456 639738 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: vpa:VP0521 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase PtsP 637456..639738 Psychromonas ingrahamii 37 4623409 YP_941958.1 CDS Ping_0504 NC_008709.1 639893 641170 R involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT complement(639893..641170) Psychromonas ingrahamii 37 4623410 YP_941959.1 CDS Ping_0505 NC_008709.1 641466 642329 D PFAM: prolipoprotein diacylglyceryl transferase; KEGG: vpa:VP0523 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 641466..642329 Psychromonas ingrahamii 37 4623411 YP_941960.1 CDS thyA NC_008709.1 642363 643214 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 642363..643214 Psychromonas ingrahamii 37 4623431 YP_941961.1 CDS Ping_0507 NC_008709.1 643291 644649 R TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pat:Patl_4206 glutathione-disulfide reductase; glutathione-disulfide reductase complement(643291..644649) Psychromonas ingrahamii 37 4623432 YP_941962.1 CDS Ping_0508 NC_008709.1 644676 645800 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(644676..645800) Psychromonas ingrahamii 37 4623433 YP_941963.1 CDS Ping_0509 NC_008709.1 646514 648457 R KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(646514..648457) Psychromonas ingrahamii 37 4623435 YP_941964.1 CDS Ping_0510 NC_008709.1 648790 649251 R hypothetical protein complement(648790..649251) Psychromonas ingrahamii 37 4623436 YP_941965.1 CDS Ping_0511 NC_008709.1 649350 649742 R KEGG: gsu:GSU2148 hypothetical protein; hypothetical protein complement(649350..649742) Psychromonas ingrahamii 37 4623437 YP_941966.1 CDS Ping_0512 NC_008709.1 650250 652370 D PFAM: PKD domain containing protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: sat:SYN_00845 hypothetical protein; PKD domain-containing protein 650250..652370 Psychromonas ingrahamii 37 4623438 YP_941967.1 CDS Ping_0513 NC_008709.1 653336 654337 D PFAM: luciferase family protein; KEGG: mxa:MXAN_5094 luciferase-like monooxygenase family protein; luciferase family protein 653336..654337 Psychromonas ingrahamii 37 4623439 YP_941968.1 CDS Ping_0514 NC_008709.1 654765 655757 R PFAM: metallophosphoesterase; KEGG: dde:Dde_1891 conserved hypothetical integral membrane protein; metallophosphoesterase complement(654765..655757) Psychromonas ingrahamii 37 4623440 YP_941969.1 CDS Ping_0515 NC_008709.1 656041 657354 D KEGG: pat:Patl_2983 putative heat shock protein 70 family protein; putative heat shock protein 70 family protein 656041..657354 Psychromonas ingrahamii 37 4623441 YP_941970.1 CDS Ping_0516 NC_008709.1 657430 660372 R KEGG: rfr:Rfer_0458 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(657430..660372) Psychromonas ingrahamii 37 4623442 YP_941971.1 CDS Ping_0517 NC_008709.1 660830 661090 D KEGG: ppr:PBPRB1658 hypothetical alkylhydroperoxidase AhpD domain protein; hypothetical protein 660830..661090 Psychromonas ingrahamii 37 4623443 YP_941972.1 CDS ribA NC_008709.1 661190 661792 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 661190..661792 Psychromonas ingrahamii 37 4623444 YP_941973.1 CDS Ping_0520 NC_008709.1 662484 663221 D PFAM: Pirin domain protein domain protein; KEGG: bca:BCE5184 hypothetical protein; pirin domain-containing protein 662484..663221 Psychromonas ingrahamii 37 4624832 YP_941974.1 CDS Ping_0521 NC_008709.1 663442 664425 D KEGG: cps:CPS_1775 putative glutathione S-transferase; putative glutathione S-transferase 663442..664425 Psychromonas ingrahamii 37 4624833 YP_941975.1 CDS Ping_0522 NC_008709.1 664871 666331 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC 664871..666331 Psychromonas ingrahamii 37 4624834 YP_941976.1 CDS Ping_0523 NC_008709.1 666467 668149 D KEGG: ppr:PBPRA1225 putative trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; trehalose-6-phosphate hydrolase 666467..668149 Psychromonas ingrahamii 37 4624835 YP_941977.1 CDS Ping_0524 NC_008709.1 668382 669377 R PFAM: Polyprenyl synthetase; KEGG: vch:VC0434 octaprenyl-diphosphate synthase; octaprenyl-diphosphate synthase complement(668382..669377) Psychromonas ingrahamii 37 4624836 YP_941978.1 CDS Ping_0525 NC_008709.1 669823 670134 D PFAM: ribosomal protein L21; KEGG: vvy:VV0470 ribosomal protein L21; 50S ribosomal protein L21 669823..670134 Psychromonas ingrahamii 37 4624837 YP_941979.1 CDS rpmA NC_008709.1 670151 670408 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 670151..670408 Psychromonas ingrahamii 37 4624838 YP_941980.1 CDS obgE NC_008709.1 670826 671986 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 670826..671986 Psychromonas ingrahamii 37 4624839 YP_941981.1 CDS Ping_0528 NC_008709.1 672080 674860 R part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA complement(672080..674860) Psychromonas ingrahamii 37 4624840 YP_941982.1 CDS Ping_0529 NC_008709.1 675332 676666 D TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: ppr:PBPRA3083 putative TrmA family RNA methyltransferase; RNA methyltransferase, TrmA family protein 675332..676666 Psychromonas ingrahamii 37 4624841 YP_941983.1 CDS Ping_0530 NC_008709.1 676697 678910 D KEGG: sec:SC2896 (p)ppGpp synthetase I (GTP pyrophosphokinase); TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 676697..678910 Psychromonas ingrahamii 37 4624842 YP_941984.1 CDS Ping_0531 NC_008709.1 679164 680738 R TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: vfi:VF0755 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(679164..680738) Psychromonas ingrahamii 37 4624843 YP_941985.1 CDS Ping_0532 NC_008709.1 680746 681606 R PFAM: CBS domain containing protein; transporter-associated region; KEGG: sdn:Sden_0812 CBS:transporter associated; Mg2+/Co2+ transporter complement(680746..681606) Psychromonas ingrahamii 37 4624844 YP_941986.1 CDS Ping_0533 NC_008709.1 681616 682092 R PFAM: protein of unknown function UPF0054; KEGG: vvy:VV0915 predicted metal-dependent hydrolase; hypothetical protein complement(681616..682092) Psychromonas ingrahamii 37 4624845 YP_941987.1 CDS Ping_0534 NC_008709.1 682092 683120 R PFAM: PhoH family protein; KEGG: sdn:Sden_0814 PhoH-like protein; PhoH family protein complement(682092..683120) Psychromonas ingrahamii 37 4624846 YP_941988.1 CDS Ping_0535 NC_008709.1 683291 684712 R KEGG: son:SO1181 tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB complement(683291..684712) Psychromonas ingrahamii 37 4624847 YP_941989.1 CDS ubiF NC_008709.1 684895 686052 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: vpa:VP0735 VisC-related protein; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 684895..686052 Psychromonas ingrahamii 37 4624848 YP_941990.1 CDS Ping_0537 NC_008709.1 686245 687927 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(686245..687927) Psychromonas ingrahamii 37 4623724 YP_941991.1 CDS Ping_0538 NC_008709.1 688039 689412 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vpa:VP0912 C4-dicarboxylate transport protein; TRAP dicarboxylate transporter subunit DctM complement(688039..689412) Psychromonas ingrahamii 37 4623725 YP_941992.1 CDS dctQ-2 NC_008709.1 689415 690038 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vpa:VP0911 putative C4-dicarboxylate transport protein DctQ; tripartite ATP-independent periplasmic transporter DctQ complement(689415..690038) Psychromonas ingrahamii 37 4623726 YP_941993.1 CDS Ping_0540 NC_008709.1 690210 691208 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vvy:VV1096 TRAP-type C4-dicarboxylate transport system, periplasmic component; TRAP dicarboxylate transporter subunit DctP complement(690210..691208) Psychromonas ingrahamii 37 4623727 YP_941994.1 CDS Ping_0541 NC_008709.1 691807 692628 R PFAM: MscS Mechanosensitive ion channel; KEGG: pca:Pcar_0812 putative transport protein; mechanosensitive ion channel protein MscS complement(691807..692628) Psychromonas ingrahamii 37 4623728 YP_941995.1 CDS Ping_0542 NC_008709.1 692869 693513 D KEGG: vvy:VV0879 hypothetical protein; hydrolase with alpha/beta-hydrolase fold 692869..693513 Psychromonas ingrahamii 37 4623729 YP_941996.1 CDS Ping_0543 NC_008709.1 693556 694758 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4555 drug resistance transporter, Bcr/CflA family protein; drug resistance transporter, Bcr/CflA subfamily protein complement(693556..694758) Psychromonas ingrahamii 37 4623730 YP_941997.1 CDS Ping_0544 NC_008709.1 695046 695903 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_3495 regulatory protein, LysR; LysR family transcriptional regulator 695046..695903 Psychromonas ingrahamii 37 4623731 YP_941998.1 CDS Ping_0545 NC_008709.1 696206 697843 D PFAM: extracellular solute-binding protein, family 5; KEGG: vvy:VVA0132 ABC-type dipeptide transport system, periplasmic component; oligopeptide ABC transporter extracellular solute-binding family 5 protein 696206..697843 Psychromonas ingrahamii 37 4623732 YP_941999.1 CDS Ping_0546 NC_008709.1 697897 698871 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0133 peptide ABC transporter, permease protein; peptide ABC transporter protein inner membrane binding component 697897..698871 Psychromonas ingrahamii 37 4623733 YP_942000.1 CDS Ping_0547 NC_008709.1 698882 699865 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0134 peptide ABC transporter, permease protein; peptide ABC transporter protein inner membrane binding component 698882..699865 Psychromonas ingrahamii 37 4623734 YP_942001.1 CDS Ping_0548 NC_008709.1 699862 700818 D KEGG: vvu:VV21294 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; ABC oligopeptide/dipeptide transporter ATP-binding protein 699862..700818 Psychromonas ingrahamii 37 4623735 YP_942002.1 CDS Ping_0549 NC_008709.1 700826 701812 D KEGG: vvy:VVA0136 ABC-type oligopeptide transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; ABC oligopeptide/dipeptide transporter ATP-binding protein 700826..701812 Psychromonas ingrahamii 37 4623736 YP_942003.1 CDS Ping_0550 NC_008709.1 701886 705425 D KEGG: vvu:VV21296 hypothetical protein; hypothetical protein 701886..705425 Psychromonas ingrahamii 37 4623737 YP_942004.1 CDS Ping_0551 NC_008709.1 705434 705865 D KEGG: bth:BT2954 hypothetical protein; hypothetical protein 705434..705865 Psychromonas ingrahamii 37 4623738 YP_942005.1 CDS Ping_0552 NC_008709.1 706053 707057 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vvy:VVA0138 transcriptional regulator; transcriptional regulator for galactose, periplasmic binding protein, LacI family protein complement(706053..707057) Psychromonas ingrahamii 37 4623739 YP_942006.1 CDS Ping_0553 NC_008709.1 707551 708903 D KEGG: vvy:VVA0142 maltoporin; maltoporin 707551..708903 Psychromonas ingrahamii 37 4623740 YP_942007.1 CDS Ping_0554 NC_008709.1 709989 711587 R PFAM: glycoside hydrolase, family 16; KEGG: vvy:VVA0140 beta-glucanase; glucan endo-1,3-beta-D-glucosidase complement(709989..711587) Psychromonas ingrahamii 37 4623741 YP_942008.1 CDS Ping_0555 NC_008709.1 712575 716855 D PFAM: Carbohydrate-binding, CenC domain protein domain protein; KEGG: cps:CPS_3716 glycosyl hydrolase, family 16; carbohydrate-binding CenC domain-containing protein 712575..716855 Psychromonas ingrahamii 37 4623742 YP_942009.1 CDS Ping_0556 NC_008709.1 717103 718965 D KEGG: vvy:VVA0139 hypothetical protein; hypothetical protein 717103..718965 Psychromonas ingrahamii 37 4623933 YP_942010.1 CDS Ping_0557 NC_008709.1 720182 720823 R KEGG: nmu:Nmul_A2454 DsbA oxidoreductase; thiol:disulfide interchange protein DsbA complement(720182..720823) Psychromonas ingrahamii 37 4623934 YP_942011.1 CDS Ping_0558 NC_008709.1 721285 722634 R PFAM: glycoside hydrolase, family 16; KEGG: sde:Sde_3021 beta-glucanase/beta-glucan synthetase-like; glycoside hydrolase complement(721285..722634) Psychromonas ingrahamii 37 4623935 YP_942012.1 CDS Ping_0559 NC_008709.1 723084 725177 D hypothetical protein 723084..725177 Psychromonas ingrahamii 37 4623936 YP_942013.1 CDS Ping_0560 NC_008709.1 725425 726369 R KEGG: yps:YPTB3641 maltose operon periplasmic protein; hypothetical protein complement(725425..726369) Psychromonas ingrahamii 37 4623937 YP_942014.1 CDS Ping_0561 NC_008709.1 727392 729092 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: ppr:PBPRA0098 putative peptide ABC transporter, ATP-binding protein; peptide ABC transporter ATP-binding protein 727392..729092 Psychromonas ingrahamii 37 4623938 YP_942015.1 CDS Ping_0562 NC_008709.1 729220 730776 D PFAM: extracellular solute-binding protein, family 5; KEGG: vfi:VF2518 dipeptide-binding protein; oligopeptide ABC transporter extracellular solute-binding family 5 protein 729220..730776 Psychromonas ingrahamii 37 4623939 YP_942016.1 CDS Ping_0563 NC_008709.1 731012 731989 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2517 dipeptide transport system permease protein DppB; peptide ABC transporter protein inner membrane binding component 731012..731989 Psychromonas ingrahamii 37 4623940 YP_942017.1 CDS Ping_0564 NC_008709.1 731992 732936 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2516 dipeptide transport system permease protein DppC; peptide ABC transporter protein inner membrane binding component 731992..732936 Psychromonas ingrahamii 37 4623941 YP_942018.1 CDS pntB NC_008709.1 733069 734445 R catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase complement(733069..734445) Psychromonas ingrahamii 37 4623942 YP_942019.1 CDS pntA NC_008709.1 734448 735992 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(734448..735992) Psychromonas ingrahamii 37 4623943 YP_942020.1 CDS Ping_0567 NC_008709.1 736503 737171 R PFAM: pseudouridine synthase; KEGG: ppr:PBPRA0408 putative ribosomal large subunit pseudouridine synthase A; pseudouridine synthase complement(736503..737171) Psychromonas ingrahamii 37 4623944 YP_942021.1 CDS hepA NC_008709.1 737324 740236 R transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA complement(737324..740236) Psychromonas ingrahamii 37 4623945 YP_942022.1 CDS Ping_0569 NC_008709.1 747679 749178 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: aci:ACIAD3447 putative transcriptional regulator (GntR family); transcriptional regulator complement(747679..749178) Psychromonas ingrahamii 37 4624124 YP_942023.1 CDS Ping_0570 NC_008709.1 749993 751009 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vch:VC1273 extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP 749993..751009 Psychromonas ingrahamii 37 4624125 YP_942024.1 CDS dctQ-3 NC_008709.1 751060 751596 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rde:RD1_0678 TRAP dicarboxylate transporter, DctQ subunit, putative; tripartite ATP-independent periplasmic transporter DctQ 751060..751596 Psychromonas ingrahamii 37 4624126 YP_942025.1 CDS Ping_0572 NC_008709.1 751679 752998 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rde:RD1_0848 TRAP dicarboxylate transporter, DctM subunit, putative; TRAP dicarboxylate transporter subunit DctM 751679..752998 Psychromonas ingrahamii 37 4624127 YP_942026.1 CDS Ping_0573 NC_008709.1 753546 754469 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ilo:IL2259 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein 753546..754469 Psychromonas ingrahamii 37 4624128 YP_942027.1 CDS Ping_0574 NC_008709.1 754459 755232 D PFAM: ABC-2 type transporter; KEGG: vfi:VF2171 ABC transporter permease protein; ABC-2 type transporter permease 754459..755232 Psychromonas ingrahamii 37 4624129 YP_942028.1 CDS Ping_0575 NC_008709.1 755229 755891 D PFAM: putative methyltransferase; KEGG: pha:PSHAa2295 methyltransferase SAM dependent; putative methyltransferase 755229..755891 Psychromonas ingrahamii 37 4624130 YP_942029.1 CDS Ping_0576 NC_008709.1 755996 757021 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 755996..757021 Psychromonas ingrahamii 37 4624131 YP_942030.1 CDS Ping_0577 NC_008709.1 757034 757654 D PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: ppr:PBPRB0738 hypothetical protein; ferric reductase domain-containing protein 757034..757654 Psychromonas ingrahamii 37 4624132 YP_942031.1 CDS Ping_0578 NC_008709.1 757829 758209 R KEGG: abo:ABO_0335 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase complement(757829..758209) Psychromonas ingrahamii 37 4624133 YP_942032.1 CDS Ping_0579 NC_008709.1 758404 759273 R KEGG: vvy:VV2764 pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase complement(758404..759273) Psychromonas ingrahamii 37 4624134 YP_942033.1 CDS Ping_0580 NC_008709.1 759294 760088 R KEGG: sbo:SBO_0123 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(759294..760088) Psychromonas ingrahamii 37 4624135 YP_942034.1 CDS Ping_0581 NC_008709.1 760404 760886 R KEGG: vfi:VF2168 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(760404..760886) Psychromonas ingrahamii 37 4624136 YP_942035.1 CDS Ping_0582 NC_008709.1 760879 762258 R TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: plu:plu0874 poly(A) polymerase (PAP) (plasmid copy number protein); poly(A) polymerase complement(760879..762258) Psychromonas ingrahamii 37 4624137 YP_942036.1 CDS Ping_0583 NC_008709.1 762370 763296 R PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: ppr:PBPRA3172 putative glutamyl-tRNA synthetase-relatedprotein; glutamate--tRNA ligase complement(762370..763296) Psychromonas ingrahamii 37 4624138 YP_942037.1 CDS dksA NC_008709.1 763341 763787 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: vfi:VF2165 DnaK suppressor protein; RNA polymerase-binding dnaK suppressor protein DksA complement(763341..763787) Psychromonas ingrahamii 37 4624139 YP_942038.1 CDS Ping_0585 NC_008709.1 764357 766864 D KEGG: tcx:Tcr_0554 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD-like helicases-like; ATP-dependent helicase HrpB 764357..766864 Psychromonas ingrahamii 37 4624140 YP_942039.1 CDS Ping_0586 NC_008709.1 767019 767819 D KEGG: hch:HCH_04968 hypothetical protein; hypothetical protein 767019..767819 Psychromonas ingrahamii 37 4624232 YP_942040.1 CDS Ping_0587 NC_008709.1 768041 768373 D PFAM: protein of unknown function UPF0060; KEGG: par:Psyc_0916 hypothetical protein; hypothetical protein 768041..768373 Psychromonas ingrahamii 37 4624233 YP_942041.1 CDS Ping_0588 NC_008709.1 768487 769641 R KEGG: son:SO0850 hypothetical protein; hypothetical protein complement(768487..769641) Psychromonas ingrahamii 37 4624234 YP_942042.1 CDS Ping_0589 NC_008709.1 770386 772050 D PFAM: EAL domain protein; SMART: GGDEF domain containing protein; KEGG: psp:PSPPH_3939 diguanylate cyclase, putative; cyclic-di-GMP regulatory protein 770386..772050 Psychromonas ingrahamii 37 4624235 YP_942043.1 CDS Ping_0590 NC_008709.1 772509 772934 D PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: ppr:PBPRB1063 hypothetical protein; glutathione-dependent formaldehyde-activating protein 772509..772934 Psychromonas ingrahamii 37 4624236 YP_942044.1 CDS Ping_0591 NC_008709.1 773058 774020 D KEGG: ppr:PBPRA0234 putative 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 773058..774020 Psychromonas ingrahamii 37 4624237 YP_942045.1 CDS Ping_0592 NC_008709.1 774183 774578 D KEGG: vch:VCA0425 hypothetical protein; hypothetical protein 774183..774578 Psychromonas ingrahamii 37 4624238 YP_942046.1 CDS Ping_0593 NC_008709.1 774701 775333 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dar:Daro_0303 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 774701..775333 Psychromonas ingrahamii 37 4624239 YP_942047.1 CDS Ping_0594 NC_008709.1 775914 776627 D KEGG: sdn:Sden_3051 hypothetical protein; hypothetical protein 775914..776627 Psychromonas ingrahamii 37 4624240 YP_942048.1 CDS Ping_0595 NC_008709.1 776781 777110 D PFAM: Uncharacterised conserved protein UCP029143; KEGG: vch:VC1576 hypothetical protein; hypothetical protein 776781..777110 Psychromonas ingrahamii 37 4624241 YP_942049.1 CDS Ping_0596 NC_008709.1 777438 779630 D KEGG: ppr:PBPRA3167 putative penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1B 777438..779630 Psychromonas ingrahamii 37 4624242 YP_942050.1 CDS Ping_0597 NC_008709.1 779767 780168 D PFAM: Fe-S metabolism associated SufE; KEGG: vvu:VV11803 SufE protein probably involved in Fe-S center assembly; Fe-S metabolism associated SufE 779767..780168 Psychromonas ingrahamii 37 4624243 YP_942051.1 CDS Ping_0598 NC_008709.1 780173 780901 D KEGG: ppr:PBPRA1286 hypothetical protein; hypothetical protein 780173..780901 Psychromonas ingrahamii 37 4624244 YP_942052.1 CDS Ping_0599 NC_008709.1 781199 782131 D PFAM: protein of unknown function DUF890; KEGG: dps:DP1289 hypothetical protein; putative SAM-dependent methyltransferase 781199..782131 Psychromonas ingrahamii 37 4624245 YP_942053.1 CDS Ping_0600 NC_008709.1 782254 783483 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(782254..783483) Psychromonas ingrahamii 37 4624246 YP_942054.1 CDS Ping_0601 NC_008709.1 783748 784404 R KEGG: sdn:Sden_1092 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase complement(783748..784404) Psychromonas ingrahamii 37 4624247 YP_942055.1 CDS Ping_0602 NC_008709.1 784935 785525 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: vch:VC2479 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase complement(784935..785525) Psychromonas ingrahamii 37 4624248 YP_942056.1 CDS Ping_0603 NC_008709.1 785871 786266 R KEGG: sdn:Sden_1101 hypothetical protein; hypothetical protein complement(785871..786266) Psychromonas ingrahamii 37 4624249 YP_942057.1 CDS Ping_0604 NC_008709.1 787211 787510 R PFAM: protein of unknown function DUF710; KEGG: ilo:IL2100 hypothetical protein; hypothetical protein complement(787211..787510) Psychromonas ingrahamii 37 4624250 YP_942058.1 CDS Ping_0605 NC_008709.1 787695 788264 D TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: sdn:Sden_0830 YgfB and YecA; yecA family protein 787695..788264 Psychromonas ingrahamii 37 4624342 YP_942059.1 CDS Ping_0606 NC_008709.1 788277 789596 D PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: sde:Sde_3513 aminopeptidase P II; peptidase M24 788277..789596 Psychromonas ingrahamii 37 4624343 YP_942060.1 CDS ubiH NC_008709.1 789589 790809 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: pha:PSHAa0563 2-octaprenyl-6-methoxyphenol hydroxylase; 2-octaprenyl-6-methoxyphenol hydroxylase 789589..790809 Psychromonas ingrahamii 37 4624344 YP_942061.1 CDS Ping_0608 NC_008709.1 790806 791042 D KEGG: pat:Patl_3501 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; ubiquinone biosynthesis hydroxylase 790806..791042 Psychromonas ingrahamii 37 4624345 YP_942062.1 CDS Ping_0609 NC_008709.1 791039 792241 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: ppr:PBPRA3117 hypothetical protein; ubiquinone biosynthesis visC protein 791039..792241 Psychromonas ingrahamii 37 4624346 YP_942063.1 CDS Ping_0610 NC_008709.1 792426 793628 D enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 792426..793628 Psychromonas ingrahamii 37 4624347 YP_942064.1 CDS Ping_0611 NC_008709.1 793705 794112 R PFAM: regulatory protein, MarR; KEGG: vvy:VV2104 transcriptional regulator; MarR family transcriptional regulator complement(793705..794112) Psychromonas ingrahamii 37 4624348 YP_942065.1 CDS Ping_0613 NC_008709.1 795067 795495 R PFAM: regulatory protein, MarR; KEGG: vfi:VFA1063 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(795067..795495) Psychromonas ingrahamii 37 4624350 YP_942066.1 CDS proX NC_008709.1 795609 796616 R with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit complement(795609..796616) Psychromonas ingrahamii 37 4624351 YP_942067.1 CDS Ping_0615 NC_008709.1 796626 797696 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VP1727 glycine betaine/L-proline transport system permease; glycine betaine ABC transporter binding protein inner membrane component complement(796626..797696) Psychromonas ingrahamii 37 4624352 YP_942068.1 CDS Ping_0616 NC_008709.1 797699 798886 R KEGG: vpa:VP1726 ABC superfamily (glycine/betaine/proline transport protein); TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase complement(797699..798886) Psychromonas ingrahamii 37 4624353 YP_942069.1 CDS Ping_0617 NC_008709.1 799429 800388 D KEGG: pmu:PM0525 KpsF protein, putative; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 799429..800388 Psychromonas ingrahamii 37 4624354 YP_942070.1 CDS Ping_0618 NC_008709.1 800395 802416 D KEGG: son:SO2064 hypothetical protein; hypothetical protein 800395..802416 Psychromonas ingrahamii 37 4624355 YP_942071.1 CDS Ping_0619 NC_008709.1 802416 802604 D KEGG: pha:PSHAa2328 hypothetical protein; hypothetical protein 802416..802604 Psychromonas ingrahamii 37 4624356 YP_942072.1 CDS Ping_0620 NC_008709.1 802633 802947 D PFAM: Uncharacterised conserved protein UCP025560; KEGG: abo:ABO_1821 hypothetical protein; hypothetical protein 802633..802947 Psychromonas ingrahamii 37 4624357 YP_942073.1 CDS Ping_0621 NC_008709.1 803009 803275 R PFAM: protein of unknown function DUF1145; KEGG: ppr:PBPRA0151 hypothetical protein; hypothetical protein complement(803009..803275) Psychromonas ingrahamii 37 4624358 YP_942074.1 CDS Ping_0622 NC_008709.1 803272 803883 R TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: pha:PSHAa0353 enzyme with N-6 adenine-specific DNA methylase domain; putative methyltransferase complement(803272..803883) Psychromonas ingrahamii 37 4624359 YP_942075.1 CDS Ping_0623 NC_008709.1 804020 805381 D KEGG: pha:PSHAa0354 cell division transporter substrate-binding protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 804020..805381 Psychromonas ingrahamii 37 4624360 YP_942076.1 CDS Ping_0624 NC_008709.1 805396 806064 D KEGG: ilo:IL0227 FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 805396..806064 Psychromonas ingrahamii 37 4624730 YP_942077.1 CDS ftsX NC_008709.1 806069 807055 D PFAM: protein of unknown function DUF214; KEGG: son:SO4584 cell division ABC transporter, permease protein FtsX; cell division ABC transporter component permease FtsX 806069..807055 Psychromonas ingrahamii 37 4624731 YP_942078.1 CDS rpoH NC_008709.1 807225 808076 D TIGRFAM: RNA polymerase sigma factor RpoH; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ilo:IL0229 DNA-directed RNA polymerase sigma 32 subunit; RNA polymerase sigma-32 factor RpoH 807225..808076 Psychromonas ingrahamii 37 4624732 YP_942079.1 CDS Ping_0627 NC_008709.1 808190 809020 D PFAM: amino acid-binding ACT domain protein; KEGG: cac:CAC0217 prephenate dehydrotase (pheA); prephenate dehydratase 808190..809020 Psychromonas ingrahamii 37 4624733 YP_942080.1 CDS Ping_0628 NC_008709.1 809053 810150 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(809053..810150) Psychromonas ingrahamii 37 4624734 YP_942081.1 CDS Ping_0629 NC_008709.1 810290 811096 D KEGG: eca:ECA4237 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; glutamate racemase 810290..811096 Psychromonas ingrahamii 37 4624735 YP_942082.1 CDS Ping_0630 NC_008709.1 811139 812323 R PFAM: NnrS family protein; KEGG: ilo:IL0194 heme/copper membrane protein; Heme/copper membrane protein of NnrS family protein complement(811139..812323) Psychromonas ingrahamii 37 4624736 YP_942083.1 CDS Ping_0631 NC_008709.1 812385 812828 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pha:PSHAa2419 hypothetical protein; BadM/Rrf2 family transcriptional regulator complement(812385..812828) Psychromonas ingrahamii 37 4624737 YP_942084.1 CDS Ping_0632 NC_008709.1 813118 813669 D PFAM: HPP family protein+B94; KEGG: tdn:Tmden_1127 HPP; HPP family protein 813118..813669 Psychromonas ingrahamii 37 4624738 YP_942085.1 CDS Ping_0633 NC_008709.1 813765 815858 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: ypk:y2527 protease II; oligopeptidase B 813765..815858 Psychromonas ingrahamii 37 4624739 YP_942086.1 CDS Ping_0634 NC_008709.1 816002 816601 D KEGG: pat:Patl_2784 hypothetical protein; hypothetical protein 816002..816601 Psychromonas ingrahamii 37 4624740 YP_942087.1 CDS Ping_0635 NC_008709.1 816652 818448 R KEGG: sde:Sde_3908 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(816652..818448) Psychromonas ingrahamii 37 4624741 YP_942088.1 CDS Ping_0636 NC_008709.1 818600 821038 R PFAM: cyclic nucleotide-binding; sodium/hydrogen exchanger; KEGG: vvy:VV1429 NhaP-type Na+/H+ and K+/H+ antiporter; cyclic nucleotide-binding protein complement(818600..821038) Psychromonas ingrahamii 37 4624742 YP_942089.1 CDS Ping_0637 NC_008709.1 821157 821639 R PFAM: RNP-1 like RNA-binding protein; KEGG: pha:PSHAa0253 hypothetical protein; RNP-1 like RNA-binding protein complement(821157..821639) Psychromonas ingrahamii 37 4624743 YP_942090.1 CDS Ping_0638 NC_008709.1 822417 824213 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 822417..824213 Psychromonas ingrahamii 37 4626836 YP_942091.1 CDS Ping_0639 NC_008709.1 824413 825318 D KEGG: vfi:VF2088 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 824413..825318 Psychromonas ingrahamii 37 4626837 YP_942092.1 CDS Ping_0640 NC_008709.1 825315 826001 D PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: vfi:VF2087 ribonuclease III; ribonuclease III 825315..826001 Psychromonas ingrahamii 37 4626838 YP_942093.1 CDS Ping_0641 NC_008709.1 826093 826995 D TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; KH, type 2 domain protein; KEGG: yps:YPTB2889 putative GTP-binding protein; GTP-binding protein Era 826093..826995 Psychromonas ingrahamii 37 4626839 YP_942094.1 CDS Ping_0642 NC_008709.1 827144 827845 D TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; KEGG: stm:STM2579 gap repair gene; DNA repair protein RecO 827144..827845 Psychromonas ingrahamii 37 4626840 YP_942095.1 CDS Ping_0643 NC_008709.1 827867 828601 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 827867..828601 Psychromonas ingrahamii 37 4626841 YP_942096.1 CDS Ping_0644 NC_008709.1 828844 830106 D TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: sde:Sde_1417 putative aminotransferase; cysteine desulfurase SufS subfamily protein 828844..830106 Psychromonas ingrahamii 37 4626842 YP_942097.1 CDS Ping_0645 NC_008709.1 830364 831515 D PFAM: glycerate kinase; KEGG: vvy:VVA1391 glycerate kinase; glycerate kinase 830364..831515 Psychromonas ingrahamii 37 4626843 YP_942098.1 CDS Ping_0646 NC_008709.1 831631 832935 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vvy:VV1577 TRAP-type C4-dicarboxylate transport system, large permease component; TRAP dicarboxylate transporter subunit DctM complement(831631..832935) Psychromonas ingrahamii 37 4626844 YP_942099.1 CDS dctQ-5 NC_008709.1 832938 833459 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vvy:VV1578 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ complement(832938..833459) Psychromonas ingrahamii 37 4626845 YP_942100.1 CDS Ping_0648 NC_008709.1 833469 834506 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vvy:VV1580 TRAP-type C4-dicarboxylate transport system, periplasmic component; TRAP dicarboxylate transporter subunit DctP complement(833469..834506) Psychromonas ingrahamii 37 4626846 YP_942101.1 CDS paaN NC_008709.1 834744 836795 D catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 834744..836795 Psychromonas ingrahamii 37 4626847 YP_942102.1 CDS paaA NC_008709.1 837052 837981 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 837052..837981 Psychromonas ingrahamii 37 4626848 YP_942103.1 CDS paaB NC_008709.1 837996 838283 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 837996..838283 Psychromonas ingrahamii 37 4626849 YP_942104.1 CDS Ping_0652 NC_008709.1 838299 839057 D TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: ecj:JW1385 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation; phenylacetate-CoA oxygenase subunit PaaI 838299..839057 Psychromonas ingrahamii 37 4626850 YP_942105.1 CDS Ping_0653 NC_008709.1 839066 839572 D TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: ecj:JW5217 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation; phenylacetate-CoA oxygenase subunit PaaJ 839066..839572 Psychromonas ingrahamii 37 4626851 YP_942106.1 CDS Ping_0654 NC_008709.1 839586 840641 D TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ecj:JW1387 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation; phenylacetate-CoA oxygenase/reductase subunit PaaK 839586..840641 Psychromonas ingrahamii 37 4626852 YP_942107.1 CDS Ping_0655 NC_008709.1 840654 841439 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ecj:JW1388 enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase/isomerase 840654..841439 Psychromonas ingrahamii 37 4626853 YP_942108.1 CDS Ping_0656 NC_008709.1 841444 842232 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 841444..842232 Psychromonas ingrahamii 37 4626854 YP_942109.1 CDS Ping_0657 NC_008709.1 842236 843771 D PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pen:PSEEN2793 3-hydroxyacyl-CoA dehydrogenase PhaC; 3-hydroxybutyryl-CoA dehydrogenase 842236..843771 Psychromonas ingrahamii 37 4626855 YP_942110.1 CDS Ping_0658 NC_008709.1 843761 844201 D TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: ecj:JW1391 predicted thioesterase; phenylacetic acid degradation protein PaaD 843761..844201 Psychromonas ingrahamii 37 4626895 YP_942111.1 CDS Ping_0659 NC_008709.1 844194 845399 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 844194..845399 Psychromonas ingrahamii 37 4626896 YP_942112.1 CDS Ping_0660 NC_008709.1 845466 846761 D TIGRFAM: phenylacetate-CoA ligase; KEGG: ecj:JW5218 phenylacetyl-CoA ligase; phenylacetate-CoA ligase 845466..846761 Psychromonas ingrahamii 37 4626897 YP_942113.1 CDS Ping_0661 NC_008709.1 847021 847878 D PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: ecj:JW1394 DNA-binding transcriptional regulator, aryl-CoA responsive; PaaX domain-containing protein, C- domain 847021..847878 Psychromonas ingrahamii 37 4626898 YP_942114.1 CDS Ping_0662 NC_008709.1 847897 848487 D KEGG: ecj:JW1395 predicted hexapeptide repeat acetyltransferase; hexapeptide repeat-containing acetyltransferase 847897..848487 Psychromonas ingrahamii 37 4626899 YP_942115.1 CDS Ping_0663 NC_008709.1 848617 851814 R PFAM: acriflavin resistance protein; KEGG: son:SO3103 AcrB/AcrD/AcrF family protein; acriflavin resistance protein complement(848617..851814) Psychromonas ingrahamii 37 4626900 YP_942116.1 CDS Ping_0664 NC_008709.1 851814 852842 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3102 AcrA/AcrE family protein; RND family efflux transporter MFP subunit complement(851814..852842) Psychromonas ingrahamii 37 4626901 YP_942117.1 CDS Ping_0665 NC_008709.1 853285 854103 D TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: ppr:PBPRA3081 putative MazG protein; MazG family protein 853285..854103 Psychromonas ingrahamii 37 4626902 YP_942118.1 CDS Ping_0666 NC_008709.1 854481 855455 D PFAM: porin, Gram-negative type; KEGG: vpa:VPA0527 outer membrane protein N, non-specific porin; porin 854481..855455 Psychromonas ingrahamii 37 4626903 YP_942119.1 CDS Ping_0667 NC_008709.1 855619 855858 D hypothetical protein 855619..855858 Psychromonas ingrahamii 37 4626904 YP_942120.1 CDS pyrG NC_008709.1 856067 857704 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 856067..857704 Psychromonas ingrahamii 37 4626905 YP_942121.1 CDS eno NC_008709.1 857814 859121 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 857814..859121 Psychromonas ingrahamii 37 4626906 YP_942122.1 CDS Ping_0670 NC_008709.1 859357 859926 D hypothetical protein 859357..859926 Psychromonas ingrahamii 37 4626907 YP_942123.1 CDS Ping_0671 NC_008709.1 860094 860372 D PFAM: Septum formation initiator; KEGG: vpa:VP2560 putative septum formation initiator; septum formation initiator 860094..860372 Psychromonas ingrahamii 37 4626908 YP_942124.1 CDS Ping_0672 NC_008709.1 860376 861065 D TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: son:SO3438 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 860376..861065 Psychromonas ingrahamii 37 4626469 YP_942125.1 CDS Ping_0673 NC_008709.1 861079 861561 D KEGG: vpa:VP2558 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase MeCPs; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 861079..861561 Psychromonas ingrahamii 37 4626470 YP_942126.1 CDS Ping_0674 NC_008709.1 861558 862592 D PFAM: tRNA pseudouridine synthase D, TruD; KEGG: pat:Patl_3859 pseudouridylate synthase; pseudouridylate synthase 861558..862592 Psychromonas ingrahamii 37 4626471 YP_942127.1 CDS Ping_0675 NC_008709.1 862592 863329 D KEGG: son:SO3435 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 862592..863329 Psychromonas ingrahamii 37 4626472 YP_942128.1 CDS Ping_0676 NC_008709.1 863798 864655 D PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: vpa:VP2554 lipoprotein NlpD; peptidase M23B 863798..864655 Psychromonas ingrahamii 37 4626473 YP_942129.1 CDS rpoS NC_008709.1 864787 865755 D TIGRFAM: RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: vvy:VV2808 DNA-directed RNA polymerase, sigma subunit; RNA polymerase sigma-38 factor RpoS 864787..865755 Psychromonas ingrahamii 37 4626474 YP_942130.1 CDS Ping_0678 NC_008709.1 866490 866687 R hypothetical protein complement(866490..866687) Psychromonas ingrahamii 37 4626475 YP_942131.1 CDS Ping_0679 NC_008709.1 866956 867501 D KEGG: vch:VC0858 type IV pilin, putative; type IV pilin 866956..867501 Psychromonas ingrahamii 37 4626476 YP_942132.1 CDS Ping_0680 NC_008709.1 867495 868100 D KEGG: ppr:PBPRA0701 putative type IV pilus assembly protein PilW; putative type IV pilus assembly protein PilW 867495..868100 Psychromonas ingrahamii 37 4626477 YP_942133.1 CDS rtxA NC_008709.1 868165 868521 D KEGG: sde:Sde_1197 hypothetical protein; structural toxin protein RtxA 868165..868521 Psychromonas ingrahamii 37 4626478 YP_942134.1 CDS Ping_0682 NC_008709.1 868552 869046 R KEGG: son:SO3587 hypothetical protein; hypothetical protein complement(868552..869046) Psychromonas ingrahamii 37 4626479 YP_942135.1 CDS Ping_0683 NC_008709.1 869224 870447 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 869224..870447 Psychromonas ingrahamii 37 4626480 YP_942136.1 CDS Ping_0684 NC_008709.1 870553 871515 R KEGG: cps:CPS_4482 Bax domain protein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase complement(870553..871515) Psychromonas ingrahamii 37 4626481 YP_942137.1 CDS Ping_0685 NC_008709.1 871901 872479 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(871901..872479) Psychromonas ingrahamii 37 4626482 YP_942138.1 CDS Ping_0686 NC_008709.1 872651 873823 D PFAM: peptidase M50; KEGG: son:SO0823 hypothetical protein; peptidase M50 872651..873823 Psychromonas ingrahamii 37 4626483 YP_942139.1 CDS Ping_0687 NC_008709.1 873915 875390 R PFAM: protein of unknown function DUF1111; KEGG: hch:HCH_00182 predicted thiol oxidoreductase; thiol oxidoreductase containing 2 cytochrome c heme-binding sites complement(873915..875390) Psychromonas ingrahamii 37 4626484 YP_942140.1 CDS Ping_0688 NC_008709.1 875458 876747 R KEGG: hch:HCH_00183 uncharacterized iron-regulated protein; iron-regulated protein complement(875458..876747) Psychromonas ingrahamii 37 4626485 YP_942141.1 CDS Ping_0689 NC_008709.1 876864 877718 D KEGG: ccr:CC0203 hypothetical protein; sterol desaturase-like protein 876864..877718 Psychromonas ingrahamii 37 4626486 YP_942142.1 CDS Ping_0690 NC_008709.1 877988 878983 R PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: ppr:PBPRB0642 hypothetical outer membrane protein OmpA; OmpA/MotB domain-containing protein complement(877988..878983) Psychromonas ingrahamii 37 4627021 YP_942143.1 CDS Ping_0691 NC_008709.1 879267 881096 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3128 ABC transporter, ATP-binding/permease protein, putative; ABC transporter ATP-binding protein complement(879267..881096) Psychromonas ingrahamii 37 4627022 YP_942144.1 CDS Ping_0692 NC_008709.1 881628 882635 D KEGG: pfo:Pfl_0671 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 881628..882635 Psychromonas ingrahamii 37 4627023 YP_942145.1 CDS Ping_0693 NC_008709.1 882906 883835 D PFAM: protein of unknown function DUF368; KEGG: hch:HCH_01875 predicted membrane protein; hypothetical protein 882906..883835 Psychromonas ingrahamii 37 4627024 YP_942146.1 CDS Ping_0694 NC_008709.1 883916 885343 R PFAM: Citrate transporter; KEGG: vvu:VV21213 Na+/H+ antiporter NhaD; citrate transporter complement(883916..885343) Psychromonas ingrahamii 37 4627025 YP_942147.1 CDS Ping_0696 NC_008709.1 886126 886719 R PFAM: NUDIX hydrolase; KEGG: vch:VC1302 MutT/nudix family protein; nucleotide phosphate derivative pyrophosphohydrolase complement(886126..886719) Psychromonas ingrahamii 37 4627027 YP_942148.1 CDS Ping_0697 NC_008709.1 886899 887885 R TIGRFAM: putative methyltransferase; PFAM: methyltransferase, putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: pha:PSHAa1946 methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain; putative methyltransferase complement(886899..887885) Psychromonas ingrahamii 37 4627028 YP_942149.1 CDS Ping_0698 NC_008709.1 888450 889178 R TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: vvy:VV2290 hypothetical protein; putative methyltransferase complement(888450..889178) Psychromonas ingrahamii 37 4627029 YP_942150.1 CDS Ping_0699 NC_008709.1 889337 891115 D TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: son:SO2433 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 889337..891115 Psychromonas ingrahamii 37 4627030 YP_942151.1 CDS Ping_0700 NC_008709.1 891355 891963 R PFAM: OmpW family protein; KEGG: son:SO1673 outer membrane protein OmpW, putative; OmpW family protein complement(891355..891963) Psychromonas ingrahamii 37 4627031 YP_942152.1 CDS Ping_0701 NC_008709.1 892316 893014 D KEGG: mja:MJ0754 hypothetical protein; hypothetical protein 892316..893014 Psychromonas ingrahamii 37 4627032 YP_942153.1 CDS Ping_0702 NC_008709.1 893591 894031 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 893591..894031 Psychromonas ingrahamii 37 4627033 YP_942154.1 CDS Ping_0703 NC_008709.1 894175 894987 D PFAM: formate/nitrite transporter; KEGG: tdn:Tmden_0716 formate/nitrite transporter; formate/nitrite transporter 894175..894987 Psychromonas ingrahamii 37 4627034 YP_942155.1 CDS Ping_0704 NC_008709.1 895150 896859 D PFAM: protein of unknown function RIO1; protein kinase; protein phosphatase 2C domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: dar:Daro_0820 protein kinase:protein phosphatase 2C-like; serine/threonine protein kinase 895150..896859 Psychromonas ingrahamii 37 4627035 YP_942156.1 CDS Ping_0705 NC_008709.1 897054 897716 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ppr:PBPRA1951 putative haemagglutinin associated protein; DNA methylase N-4/N-6 domain-containing protein 897054..897716 Psychromonas ingrahamii 37 4627036 YP_942157.1 CDS Ping_0706 NC_008709.1 897917 898225 D PFAM: transcriptional coactivator/pterin dehydratase; KEGG: pat:Patl_1692 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 897917..898225 Psychromonas ingrahamii 37 4627037 YP_942158.1 CDS Ping_0707 NC_008709.1 898650 900605 D PFAM: sodium/hydrogen exchanger; KEGG: sdn:Sden_1732 sodium/hydrogen exchanger; sodium/hydrogen exchanger 898650..900605 Psychromonas ingrahamii 37 4627038 YP_942159.1 CDS Ping_0708 NC_008709.1 901049 902047 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vpa:VP0910 C4-dicarboxylate-binding periplasmic protein; TRAP dicarboxylate transporter subunit DctP 901049..902047 Psychromonas ingrahamii 37 4627039 YP_942160.1 CDS dctQ-1 NC_008709.1 902164 902787 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vpa:VP0911 putative C4-dicarboxylate transport protein DctQ; tripartite ATP-independent periplasmic transporter DctQ 902164..902787 Psychromonas ingrahamii 37 4625056 YP_942161.1 CDS Ping_0710 NC_008709.1 902790 904163 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vpa:VP0912 C4-dicarboxylate transport protein; TRAP dicarboxylate transporter subunit DctM 902790..904163 Psychromonas ingrahamii 37 4625057 YP_942162.1 CDS Ping_0711 NC_008709.1 904388 905074 D PFAM: sugar fermentation stimulation protein; KEGG: vpa:VP2499 sugar fermentation stimulation protein; sugar fermentation stimulation protein 904388..905074 Psychromonas ingrahamii 37 4625058 YP_942163.1 CDS Ping_0712 NC_008709.1 905106 906446 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: vvu:VV10026 response regulator; C4-dicarboxylate transport sigma-54 regulatory protein complement(905106..906446) Psychromonas ingrahamii 37 4625059 YP_942164.1 CDS Ping_0713 NC_008709.1 906443 906574 R KEGG: vpa:VP0914 C4-dicarboxylate transport transcriptional regulatory protein; response regulator receiver protein complement(906443..906574) Psychromonas ingrahamii 37 4625060 YP_942165.1 CDS Ping_0714 NC_008709.1 906590 908374 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: vpa:VP0915 C4-dicarboxylate transport sensor protein; C4-dicarboxylate transport sensor protein ATPase subunit complement(906590..908374) Psychromonas ingrahamii 37 4625061 YP_942166.1 CDS Ping_0715 NC_008709.1 909456 909833 D KEGG: eca:ECA1027 hypothetical protein; hypothetical protein 909456..909833 Psychromonas ingrahamii 37 4625062 YP_942167.1 CDS Ping_0716 NC_008709.1 910190 910711 D TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; KEGG: pat:Patl_2946 crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 910190..910711 Psychromonas ingrahamii 37 4625063 YP_942168.1 CDS Ping_0717 NC_008709.1 910762 911646 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: ppr:PBPRA3509 putative RarD; transporter DMT superfamily protein 910762..911646 Psychromonas ingrahamii 37 4625064 YP_942169.1 CDS Ping_0718 NC_008709.1 911744 912367 D KEGG: pha:PSHAa1876 Holliday junction DNA helicase motor protein; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA, domain I; SMART: Helix-hairpin-helix DNA-binding, class 1; Holliday junction DNA helicase RuvA 911744..912367 Psychromonas ingrahamii 37 4625065 YP_942170.1 CDS ruvB NC_008709.1 912398 913402 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 912398..913402 Psychromonas ingrahamii 37 4625066 YP_942171.1 CDS Ping_0720 NC_008709.1 914178 915758 D PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: son:SO3286 cytochrome bd-I oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 914178..915758 Psychromonas ingrahamii 37 4625067 YP_942172.1 CDS Ping_0721 NC_008709.1 915768 916907 D TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: son:SO3285 cytochrome bd-I oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 915768..916907 Psychromonas ingrahamii 37 4625068 YP_942173.1 CDS Ping_0722 NC_008709.1 916930 917058 D TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: pat:Patl_1454 cyd operon protein YbgT; cyd operon protein YbgT 916930..917058 Psychromonas ingrahamii 37 4625069 YP_942174.1 CDS Ping_0723 NC_008709.1 917408 917860 D TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: ilo:IL1084 predicted thioesterase; 4-hydroxybenzoyl-CoA thioesterase 917408..917860 Psychromonas ingrahamii 37 4625070 YP_942175.1 CDS Ping_0724 NC_008709.1 917850 918533 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: sdn:Sden_1391 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 917850..918533 Psychromonas ingrahamii 37 4625071 YP_942176.1 CDS Ping_0725 NC_008709.1 918542 918979 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ilo:IL1082 biopolymer transport protein; biopolymer transport protein ExbD/TolR 918542..918979 Psychromonas ingrahamii 37 4624917 YP_942177.1 CDS Ping_0726 NC_008709.1 918976 919890 D PFAM: TolA family protein; KEGG: son:SO2749 tolA protein; TolA family protein 918976..919890 Psychromonas ingrahamii 37 4624918 YP_942178.1 CDS Ping_0727 NC_008709.1 919905 921218 D PFAM: TolB, N-terminal domain protein; WD40 domain protein beta Propeller; KEGG: pat:Patl_2939 TolB-like; TolB domain-containing protein 919905..921218 Psychromonas ingrahamii 37 4624919 YP_942179.1 CDS Ping_0728 NC_008709.1 921247 921834 D TIGRFAM: OmpA domain protein; PFAM: OmpA/MotB domain protein; KEGG: pat:Patl_2938 OmpA/MotB; OmpA domain-containing protein 921247..921834 Psychromonas ingrahamii 37 4624920 YP_942180.1 CDS Ping_0729 NC_008709.1 921841 922608 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: vpa:VP1062 hypothetical protein; hypothetical protein 921841..922608 Psychromonas ingrahamii 37 4624921 YP_942181.1 CDS Ping_0730 NC_008709.1 924102 925163 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 924102..925163 Psychromonas ingrahamii 37 4624927 YP_942182.1 CDS Ping_0731 NC_008709.1 925282 925764 D PFAM: protein of unknown function DUF1456; KEGG: dps:DP0662 hypothetical protein; hypothetical protein 925282..925764 Psychromonas ingrahamii 37 4624928 YP_942183.1 CDS Ping_0732 NC_008709.1 925923 926558 R KEGG: vfi:VF0929 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III complement(925923..926558) Psychromonas ingrahamii 37 4624929 YP_942184.1 CDS Ping_0733 NC_008709.1 926772 927464 R TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: cps:CPS_2194 electron transport complex, RnfABCDGE type, E subunit; RnfABCDGE type electron transport complex subunit E complement(926772..927464) Psychromonas ingrahamii 37 4624930 YP_942185.1 CDS Ping_0734 NC_008709.1 927461 928096 R TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: pat:Patl_2969 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G complement(927461..928096) Psychromonas ingrahamii 37 4624931 YP_942186.1 CDS Ping_0735 NC_008709.1 928366 929418 R TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: ppr:PBPRA2563 putative RnfD-related protein; RnfABCDGE type electron transport complex subunit D complement(928366..929418) Psychromonas ingrahamii 37 4624932 YP_942187.1 CDS Ping_0736 NC_008709.1 929424 931997 R TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: vfi:VF0933 electron transport complex protein RnfC; RnfABCDGE type electron transport complex subunit C complement(929424..931997) Psychromonas ingrahamii 37 4624933 YP_942188.1 CDS Ping_0737 NC_008709.1 932002 932556 R TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: pha:PSHAa1104 electron transport complex protein RnfB; RnfABCDGE type electron transport complex subunit B complement(932002..932556) Psychromonas ingrahamii 37 4624934 YP_942189.1 CDS Ping_0738 NC_008709.1 932572 933150 R TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: vpa:VP2102 RnfA-related protein; RnfABCDGE type electron transport complex subunit A complement(932572..933150) Psychromonas ingrahamii 37 4624935 YP_942190.1 CDS Ping_0739 NC_008709.1 933535 933795 D hypothetical protein 933535..933795 Psychromonas ingrahamii 37 4623657 YP_942191.1 CDS Ping_0740 NC_008709.1 933858 935972 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 933858..935972 Psychromonas ingrahamii 37 4623658 YP_942192.1 CDS nrdG NC_008709.1 935972 936439 D activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 935972..936439 Psychromonas ingrahamii 37 4623659 YP_942193.1 CDS Ping_0742 NC_008709.1 936852 937178 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: ppr:PBPRA1151 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 936852..937178 Psychromonas ingrahamii 37 4623660 YP_942194.1 CDS Ping_0743 NC_008709.1 937255 939513 D KEGG: pha:PSHAa1724 ATP-dependent specificity subunit of ClpA-ClpP serine protease; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 937255..939513 Psychromonas ingrahamii 37 4623661 YP_942195.1 CDS Ping_0744 NC_008709.1 939604 939822 R TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1, IF1 family protein; KEGG: sgl:SG1103 translation initiation factor IF-1; translation initiation factor IF-1 complement(939604..939822) Psychromonas ingrahamii 37 4623662 YP_942196.1 CDS Ping_0745 NC_008709.1 940585 940896 D PFAM: BolA family protein; KEGG: vch:VC2296 bolA protein; BolA family protein 940585..940896 Psychromonas ingrahamii 37 4623663 YP_942197.1 CDS Ping_0746 NC_008709.1 941229 942569 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 941229..942569 Psychromonas ingrahamii 37 4623664 YP_942198.1 CDS Ping_0747 NC_008709.1 942572 943780 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 942572..943780 Psychromonas ingrahamii 37 4623665 YP_942199.1 CDS Ping_0748 NC_008709.1 943773 944549 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 943773..944549 Psychromonas ingrahamii 37 4623666 YP_942200.1 CDS Ping_0749 NC_008709.1 944542 945174 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit D; PFAM: RnfA-Nqr electron transport subunit; KEGG: vch:VC2292 NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD; NADH:ubiquinone oxidoreductase subunit D 944542..945174 Psychromonas ingrahamii 37 4623667 YP_942201.1 CDS Ping_0750 NC_008709.1 945180 945788 D Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 945180..945788 Psychromonas ingrahamii 37 4623668 YP_942202.1 CDS Ping_0751 NC_008709.1 945839 947062 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 945839..947062 Psychromonas ingrahamii 37 4623669 YP_942203.1 CDS Ping_0752 NC_008709.1 947172 948206 D PFAM: ApbE family lipoprotein; KEGG: vpa:VP2345 thiamin biosynthesis lipoprotein ApbE; ApbE family lipoprotein 947172..948206 Psychromonas ingrahamii 37 4623670 YP_942204.1 CDS Ping_0753 NC_008709.1 948203 948427 D PFAM: protein of unknown function DUF539; KEGG: ppr:PBPRA0830 hypothetical protein; hypothetical protein 948203..948427 Psychromonas ingrahamii 37 4623671 YP_942205.1 CDS Ping_0754 NC_008709.1 948521 948976 R PFAM: protein of unknown function DUF188; KEGG: son:SO2894 YaiI/YqxD family protein; hypothetical protein complement(948521..948976) Psychromonas ingrahamii 37 4623672 YP_942206.1 CDS Ping_0755 NC_008709.1 949524 949730 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: pat:Patl_1543 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 949524..949730 Psychromonas ingrahamii 37 4623673 YP_942207.1 CDS Ping_0756 NC_008709.1 949880 950464 D TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; KEGG: cps:CPS_2837 deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 949880..950464 Psychromonas ingrahamii 37 4623674 YP_942208.1 CDS Ping_0757 NC_008709.1 951460 952689 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: rso:RS02139 hypothetical protein; hypothetical protein 951460..952689 Psychromonas ingrahamii 37 4623675 YP_001012223.1 CDS Ping_0758 NC_008709.1 953597 954007 D PFAM: DNA polymerase, beta domain protein region; KEGG: son:SO1440 hypothetical protein; DNA polymerase subunit beta 953597..954007 Psychromonas ingrahamii 37 4626501 YP_001012224.1 CDS Ping_0759 NC_008709.1 954000 954425 D PFAM: protein of unknown function DUF86; KEGG: son:SO1440 hypothetical protein; hypothetical protein 954000..954425 Psychromonas ingrahamii 37 4781313 YP_001012225.1 CDS Ping_0760 NC_008709.1 955988 956389 D PFAM: DNA polymerase, beta domain protein region; KEGG: son:SO1440 hypothetical protein; DNA polymerase subunit beta 955988..956389 Psychromonas ingrahamii 37 4626502 YP_001012226.1 CDS Ping_0761 NC_008709.1 956379 956816 D PFAM: protein of unknown function DUF86; KEGG: son:SO1440 hypothetical protein; hypothetical protein 956379..956816 Psychromonas ingrahamii 37 4781312 YP_942209.1 CDS Ping_0762 NC_008709.1 958537 959712 D KEGG: sdn:Sden_0209 hypothetical protein; hypothetical protein 958537..959712 Psychromonas ingrahamii 37 4626503 YP_942210.1 CDS Ping_0763 NC_008709.1 959792 962350 D PFAM: polysaccharide export protein; KEGG: vpa:VP0220 OtnA protein; polysaccharide export protein 959792..962350 Psychromonas ingrahamii 37 4626504 YP_942211.1 CDS Ping_0764 NC_008709.1 962538 963461 D PFAM: lipopolysaccharide biosynthesis; KEGG: son:SO3191 chain length determinant protein; lipopolysaccharide biosynthesis protein 962538..963461 Psychromonas ingrahamii 37 4626505 YP_942212.1 CDS Ping_0765 NC_008709.1 963631 964101 D PFAM: NUDIX hydrolase; KEGG: ecp:ECP_2091 GDP-mannose mannosyl hydrolase; GDP-mannose mannosyl hydrolase 963631..964101 Psychromonas ingrahamii 37 4626506 YP_942213.1 CDS Ping_0766 NC_008709.1 964172 965623 D KEGG: pat:Patl_1792 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 964172..965623 Psychromonas ingrahamii 37 4626507 YP_942214.1 CDS Ping_0767 NC_008709.1 965842 966966 D PFAM: transposase, IS4 family protein; KEGG: ssn:SSO_0260 putative receptor; transposase, IS4 family protein 965842..966966 Psychromonas ingrahamii 37 4626508 YP_942215.1 CDS Ping_0769 NC_008709.1 967497 968924 D PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: stm:STM2083 LPS side chain defect: phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 967497..968924 Psychromonas ingrahamii 37 4626510 YP_942216.1 CDS Ping_0770 NC_008709.1 969100 970227 D TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: cps:CPS_4199 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 969100..970227 Psychromonas ingrahamii 37 4626511 YP_942217.1 CDS Ping_0771 NC_008709.1 970560 971528 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: yps:YPTB1010 GDP-fucose synthetase; bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase 970560..971528 Psychromonas ingrahamii 37 4626512 YP_942218.1 CDS Ping_0772 NC_008709.1 971535 972500 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 971535..972500 Psychromonas ingrahamii 37 4626513 YP_942219.1 CDS Ping_0773 NC_008709.1 972525 973298 D TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: vfi:VF0182 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 972525..973298 Psychromonas ingrahamii 37 4626514 YP_942220.1 CDS Ping_0774 NC_008709.1 973302 974390 D TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; KEGG: vfi:VF0183 CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase 973302..974390 Psychromonas ingrahamii 37 4626515 YP_942221.1 CDS Ping_0775 NC_008709.1 974383 975696 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: vfi:VF0184 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; DegT/DnrJ/EryC1/StrS aminotransferase 974383..975696 Psychromonas ingrahamii 37 4626516 YP_942222.1 CDS Ping_0776 NC_008709.1 975737 976582 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ypn:YPN_0978 paratose synthase; UDP-glucose 4-epimerase 975737..976582 Psychromonas ingrahamii 37 4626517 YP_942223.1 CDS Ping_0777 NC_008709.1 976582 977598 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: stt:t0784 CDP-tyvelose-2-epimerase; dNTP-hexose dehydratase/epimerase 976582..977598 Psychromonas ingrahamii 37 4626518 YP_942224.1 CDS Ping_0778 NC_008709.1 977598 978926 D PFAM: polysaccharide biosynthesis protein; KEGG: bfs:BF2598 putative LPS biosynthesis related polysaccharide transporter/flippase; polysaccharide biosynthesis protein 977598..978926 Psychromonas ingrahamii 37 4626519 YP_942225.1 CDS Ping_0779 NC_008709.1 978919 979854 D PFAM: glycosyl transferase, family 2; KEGG: bfs:BF2599 putative LPS biosynthesis related glycosyltransferase; glycosyl transferase family protein 978919..979854 Psychromonas ingrahamii 37 4626487 YP_942226.1 CDS Ping_0782 NC_008709.1 982440 983399 D cytidylyltransferase family protein 982440..983399 Psychromonas ingrahamii 37 4626490 YP_942227.1 CDS Ping_0783 NC_008709.1 983939 984697 D hypothetical protein 983939..984697 Psychromonas ingrahamii 37 4626491 YP_942228.1 CDS Ping_0784 NC_008709.1 984699 985361 D KEGG: bfs:BF1022 putative deacetylase; deacetylase 984699..985361 Psychromonas ingrahamii 37 4626492 YP_942229.1 CDS Ping_0785 NC_008709.1 985358 986095 D KEGG: lil:LA1656 glycosyl transferase; glycosyltransferase 985358..986095 Psychromonas ingrahamii 37 4626493 YP_942230.1 CDS Ping_0786 NC_008709.1 986439 987563 D PFAM: transposase, IS4 family protein; KEGG: ssn:SSO_0260 putative receptor; transposase, IS4 family protein 986439..987563 Psychromonas ingrahamii 37 4626494 YP_942231.1 CDS Ping_0788 NC_008709.1 987920 988894 D KEGG: vvy:VV0348 hypothetical protein; hypothetical protein 987920..988894 Psychromonas ingrahamii 37 4626496 YP_942232.1 CDS Ping_0789 NC_008709.1 988903 989940 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Polysaccharide biosynthesis C-terminal domain protein; KEGG: vfi:VF0191 UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 3,5-epimerase; bifunctional dTDP-4-dehydrorhamnose reductase/3-beta hydroxysteroid dehydrogenase/isomerase 988903..989940 Psychromonas ingrahamii 37 4626497 YP_942233.1 CDS Ping_0790 NC_008709.1 989941 990828 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rbe:RBE_0710 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 989941..990828 Psychromonas ingrahamii 37 4626498 YP_942234.1 CDS Ping_0791 NC_008709.1 990816 991943 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: lic:LIC12139 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 990816..991943 Psychromonas ingrahamii 37 4626499 YP_942235.1 CDS Ping_0792 NC_008709.1 992014 993213 D PFAM: glycosyl transferase, group 1; KEGG: lic:LIC12138 colanic acid biosynthesis glycosyl-transferase; group 1 glycosyl transferase 992014..993213 Psychromonas ingrahamii 37 4626500 YP_942236.1 CDS Ping_0793 NC_008709.1 993740 994864 D PFAM: transposase, IS4 family protein; KEGG: ssn:SSO_0260 putative receptor; transposase, IS4 family protein 993740..994864 Psychromonas ingrahamii 37 4626366 YP_942237.1 CDS Ping_0794 NC_008709.1 994825 995115 R KEGG: son:SOA0162 ISSod6, transposase; hypothetical protein complement(994825..995115) Psychromonas ingrahamii 37 4626367 YP_942238.1 CDS Ping_0795 NC_008709.1 995661 996794 D TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase, family 4; KEGG: cps:CPS_2091 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 995661..996794 Psychromonas ingrahamii 37 4626368 YP_942239.1 CDS Ping_0796 NC_008709.1 997166 998074 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase 997166..998074 Psychromonas ingrahamii 37 4626369 YP_942240.1 CDS Ping_0797 NC_008709.1 998193 998540 D crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 998193..998540 Psychromonas ingrahamii 37 4626370 YP_942241.1 CDS Ping_0798 NC_008709.1 998590 999999 D KEGG: cps:CPS_2143 sulfate adenylate transferase, subunit 1; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; sulfate adenylyltransferase 998590..999999 Psychromonas ingrahamii 37 4626371 YP_942242.1 CDS Ping_0799 NC_008709.1 1000111 1001838 D PFAM: Citrate transporter; TrkA-C domain protein; KEGG: cps:CPS_2144 putative transporter; potassium uptake protein 1000111..1001838 Psychromonas ingrahamii 37 4626372 YP_942243.1 CDS Ping_0800 NC_008709.1 1002082 1002714 D PFAM: adenylylsulfate kinase; KEGG: cps:CPS_2145 adenylylsulfate kinase; adenylylsulfate kinase 1002082..1002714 Psychromonas ingrahamii 37 4626373 YP_942244.1 CDS Ping_0801 NC_008709.1 1002897 1003856 D KEGG: vfi:VF0200 acetyltransferase; acetyltransferase 1002897..1003856 Psychromonas ingrahamii 37 4626374 YP_942245.1 CDS Ping_0802 NC_008709.1 1004183 1004452 R PFAM: RNP-1 like RNA-binding protein; KEGG: ppr:PBPRB1959 hypothetical protein; RNP-1 like RNA-binding protein complement(1004183..1004452) Psychromonas ingrahamii 37 4626375 YP_942246.1 CDS Ping_0803 NC_008709.1 1004655 1005044 R hypothetical protein complement(1004655..1005044) Psychromonas ingrahamii 37 4626376 YP_942247.1 CDS Ping_0805 NC_008709.1 1005740 1006864 R PFAM: transposase, IS4 family protein; KEGG: ssn:SSO_0260 putative receptor; transposase, IS4 family protein complement(1005740..1006864) Psychromonas ingrahamii 37 4626378 YP_942248.1 CDS prfC NC_008709.1 1007231 1008817 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1007231..1008817 Psychromonas ingrahamii 37 4626379 YP_942249.1 CDS Ping_0807 NC_008709.1 1010247 1011050 D PFAM: TatD-related deoxyribonuclease; KEGG: vpa:VP2439 putative hydrolase; TatD-related deoxyribonuclease 1010247..1011050 Psychromonas ingrahamii 37 4626380 YP_942250.1 CDS Ping_0808 NC_008709.1 1011128 1011607 D TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: pat:Patl_2213 transcription elongation factor GreA; transcription elongation factor GreA 1011128..1011607 Psychromonas ingrahamii 37 4626381 YP_942251.1 CDS Ping_0809 NC_008709.1 1011669 1012001 R PFAM: protein of unknown function UPF0044; KEGG: pat:Patl_1569 protein of unknown function UPF0044; hypothetical protein complement(1011669..1012001) Psychromonas ingrahamii 37 4626382 YP_942252.1 CDS Ping_0810 NC_008709.1 1012098 1012751 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: son:SO1196 ribosomal RNA large subunit methyltransferase J; ribosomal RNA methyltransferase RrmJ/FtsJ 1012098..1012751 Psychromonas ingrahamii 37 4626383 YP_942253.1 CDS Ping_0811 NC_008709.1 1013086 1015077 D KEGG: sdn:Sden_1000 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 1013086..1015077 Psychromonas ingrahamii 37 4626384 YP_942254.1 CDS Ping_0812 NC_008709.1 1015169 1016002 D KEGG: hin:HI1464 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 1015169..1016002 Psychromonas ingrahamii 37 4623910 YP_942255.1 CDS Ping_0813 NC_008709.1 1016043 1017374 D TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: vpa:VP2461 phosphoglucomutase/phosphomannomutase family protein MrsA; phosphoglucosamine mutase 1016043..1017374 Psychromonas ingrahamii 37 4623911 YP_942256.1 CDS Ping_0814 NC_008709.1 1017571 1017894 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: pat:Patl_1575 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 1017571..1017894 Psychromonas ingrahamii 37 4623912 YP_942257.1 CDS Ping_0815 NC_008709.1 1018461 1018922 D PFAM: protein of unknown function DUF150; KEGG: vfi:VF0484 hypothetical protein; hypothetical protein 1018461..1018922 Psychromonas ingrahamii 37 4625456 YP_942258.1 CDS Ping_0816 NC_008709.1 1018934 1020433 D KEGG: sdn:Sden_1006 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA N-terminal domain protein; SMART: KH domain protein; NusA antitermination factor 1018934..1020433 Psychromonas ingrahamii 37 4625457 YP_942259.1 CDS Ping_0817 NC_008709.1 1020456 1023098 D TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; GTP-binding protein, HSR1-related; elongation factor Tu, domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein, ; Miro domain protein; KEGG: vfi:VF0486 bacterial protein translation initiation factor 2 (IF-2); translation initiation factor IF-2 1020456..1023098 Psychromonas ingrahamii 37 4625458 YP_942260.1 CDS Ping_0818 NC_008709.1 1023193 1023594 D PFAM: ribosome-binding factor A; KEGG: vfi:VF0487 ribosome-binding factor A; ribosome-binding factor A 1023193..1023594 Psychromonas ingrahamii 37 4625459 YP_942261.1 CDS Ping_0819 NC_008709.1 1023594 1024526 D KEGG: vpa:VP2454 tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 1023594..1024526 Psychromonas ingrahamii 37 4625460 YP_942262.1 CDS Ping_0820 NC_008709.1 1024575 1024784 D KEGG: son:SO1588 hypothetical protein; hypothetical protein 1024575..1024784 Psychromonas ingrahamii 37 4625461 YP_942263.1 CDS Ping_0821 NC_008709.1 1025288 1026247 D PFAM: protein of unknown function DUF534; KEGG: bmb:BruAb1_2028 ABC transporter, periplasmic substrate-binding protein, hypothetical; ABC transporter substrate binding inner membrane protein 1025288..1026247 Psychromonas ingrahamii 37 4625462 YP_942264.1 CDS Ping_0822 NC_008709.1 1026263 1027162 D PFAM: inner-membrane translocator; KEGG: ret:RHE_CH03928 putative sugar ABC transporter, permease protein; ABC transporter inner-membrane translocator 1026263..1027162 Psychromonas ingrahamii 37 4625463 YP_942265.1 CDS Ping_0823 NC_008709.1 1027159 1027962 D PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1738 probable ATP-binding ABC transporter protein; ABC transporter ATP-binding protein 1027159..1027962 Psychromonas ingrahamii 37 4625464 YP_942266.1 CDS Ping_0824 NC_008709.1 1028109 1028378 D PFAM: ribosomal protein S15; KEGG: eca:ECA0715 30S ribosomal protein S15; 30S ribosomal protein S15 1028109..1028378 Psychromonas ingrahamii 37 4625466 YP_942267.1 CDS Ping_0825 NC_008709.1 1028524 1030620 D KEGG: cps:CPS_2207 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 1028524..1030620 Psychromonas ingrahamii 37 4625467 YP_942268.1 CDS Ping_0826 NC_008709.1 1030900 1032258 D TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: vch:VC2542 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; UDP-N-acetylmuramate 1030900..1032258 Psychromonas ingrahamii 37 4625850 YP_942269.1 CDS Ping_0827 NC_008709.1 1032260 1032880 D TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: cps:CPS_0408 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1032260..1032880 Psychromonas ingrahamii 37 4625851 YP_942270.1 CDS Ping_0828 NC_008709.1 1040057 1040740 D KEGG: cps:CPS_1245 hypothetical protein; hypothetical protein 1040057..1040740 Psychromonas ingrahamii 37 4625856 YP_942271.1 CDS Ping_0829 NC_008709.1 1040865 1041359 R PFAM: CreA family protein; KEGG: ppr:PBPRB0517 putative CreA protein; CreA family protein complement(1040865..1041359) Psychromonas ingrahamii 37 4625857 YP_942272.1 CDS Ping_0830 NC_008709.1 1041370 1042146 R KEGG: vch:VC0904 hypothetical protein; hypothetical protein complement(1041370..1042146) Psychromonas ingrahamii 37 4625858 YP_942273.1 CDS Ping_0831 NC_008709.1 1042149 1042475 R KEGG: cps:CPS_3531 hypothetical protein; hypothetical protein complement(1042149..1042475) Psychromonas ingrahamii 37 4625859 YP_942274.1 CDS Ping_0832 NC_008709.1 1042487 1042804 R KEGG: vfi:VF0610 hypothetical protein; hypothetical protein complement(1042487..1042804) Psychromonas ingrahamii 37 4625860 YP_942275.1 CDS Ping_0833 NC_008709.1 1042816 1043856 R KEGG: sdn:Sden_1544 hypothetical protein; hypothetical protein complement(1042816..1043856) Psychromonas ingrahamii 37 4625861 YP_942276.1 CDS Ping_0834 NC_008709.1 1044080 1044421 D PFAM: protein of unknown function DUF446; KEGG: ilo:IL0850 hypothetical protein; hypothetical protein 1044080..1044421 Psychromonas ingrahamii 37 4625862 YP_942277.1 CDS Ping_0835 NC_008709.1 1044610 1045008 D KEGG: hch:HCH_00238 hypothetical protein; hypothetical protein 1044610..1045008 Psychromonas ingrahamii 37 4625863 YP_942278.1 CDS Ping_0836 NC_008709.1 1045338 1047137 D KEGG: gme:Gmet_2694 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; sensor histidine kinase PAS domain-containing protein 1045338..1047137 Psychromonas ingrahamii 37 4625864 YP_942279.1 CDS Ping_0837 NC_008709.1 1047375 1047638 D KEGG: cps:CPS_2578 hypothetical protein; hypothetical protein 1047375..1047638 Psychromonas ingrahamii 37 4625865 YP_942280.1 CDS Ping_0838 NC_008709.1 1047879 1049090 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: vfi:VF1790 ATP-dependent RNA helicase; ATP-dependent RNA helicase 1047879..1049090 Psychromonas ingrahamii 37 4625866 YP_942281.1 CDS Ping_0839 NC_008709.1 1049217 1050089 R KEGG: neu:NE1157 hypothetical protein; hypothetical protein complement(1049217..1050089) Psychromonas ingrahamii 37 4625867 YP_942282.1 CDS Ping_0840 NC_008709.1 1050631 1051773 D PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB2866 putative MFS family 3-phenylpropionic acid transporter; major facilitator superfamily transporter 1050631..1051773 Psychromonas ingrahamii 37 4626605 YP_942283.1 CDS Ping_0841 NC_008709.1 1051948 1052433 D PFAM: FxsA cytoplasmic membrane protein; KEGG: vpa:VP2862 FxsA protein; FxsA cytoplasmic membrane protein 1051948..1052433 Psychromonas ingrahamii 37 4626606 YP_942284.1 CDS Ping_0842 NC_008709.1 1052630 1052875 D KEGG: ppr:PBPRA0377 hypothetical protein; hypothetical protein 1052630..1052875 Psychromonas ingrahamii 37 4626607 YP_942285.1 CDS Ping_0843 NC_008709.1 1053215 1053505 D PFAM: chaperonin Cpn10; KEGG: cps:CPS_0956 chaperone protein GroES; chaperonin Cpn10, GroES, small subunit of GroESL 1053215..1053505 Psychromonas ingrahamii 37 4626608 YP_942286.1 CDS Ping_0844 NC_008709.1 1053574 1055208 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: vfi:VF0205 60 kDa chaperonin GROEL; chaperonin Cpn60, GroEL, large subunit of GroESL 1053574..1055208 Psychromonas ingrahamii 37 4626609 YP_942287.1 CDS Ping_0845 NC_008709.1 1055547 1055702 D KEGG: cps:CPS_3257 monooxygenase family protein; hypothetical protein 1055547..1055702 Psychromonas ingrahamii 37 4626610 YP_942288.1 CDS Ping_0846 NC_008709.1 1056183 1057502 D KEGG: rso:RSc3188 putative hemagglutinin-related protein; hypothetical protein 1056183..1057502 Psychromonas ingrahamii 37 4626611 YP_942289.1 CDS Ping_0848 NC_008709.1 1058990 1060291 D KEGG: sma:SAV4164 hypothetical protein; hypothetical protein 1058990..1060291 Psychromonas ingrahamii 37 4626613 YP_942290.1 CDS Ping_0849 NC_008709.1 1061209 1062663 D PFAM: monooxygenase, FAD-binding; KEGG: cps:CPS_3257 monooxygenase family protein; FAD-binding monooxygenase 1061209..1062663 Psychromonas ingrahamii 37 4626614 YP_942291.1 CDS Ping_0850 NC_008709.1 1062772 1063323 R KEGG: pat:Patl_4052 hypothetical protein; alkylhydroperoxidase complement(1062772..1063323) Psychromonas ingrahamii 37 4626615 YP_942292.1 CDS Ping_0851 NC_008709.1 1064059 1068846 D PFAM: NAD-glutamate dehydrogenase; KEGG: pen:PSEEN1740 NAD-specific glutamate dehydrogenase; arginine inducible; NAD-glutamate dehydrogenase 1064059..1068846 Psychromonas ingrahamii 37 4626616 YP_942293.1 CDS Ping_0852 NC_008709.1 1069138 1069923 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ppr:PBPRA2993 putative HesA/MoeB/ThiF family protein; UBA/THIF-type NAD/FAD binding protein complement(1069138..1069923) Psychromonas ingrahamii 37 4626617 YP_942294.1 CDS Ping_0853 NC_008709.1 1070256 1071737 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(1070256..1071737) Psychromonas ingrahamii 37 4626618 YP_942295.1 CDS Ping_0854 NC_008709.1 1072002 1072871 D PFAM: Rhodanese domain protein; KEGG: ppr:PBPRB0882 hypothetical rhodanese-related sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 1072002..1072871 Psychromonas ingrahamii 37 4626619 YP_942296.1 CDS ilvY NC_008709.1 1073173 1074054 D participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 1073173..1074054 Psychromonas ingrahamii 37 4626620 YP_942297.1 CDS Ping_0856 NC_008709.1 1074127 1074420 D PFAM: protein of unknown function UPF0153; KEGG: pha:PSHAb0120 hypothetical protein; hypothetical protein 1074127..1074420 Psychromonas ingrahamii 37 4626621 YP_942298.1 CDS Ping_0857 NC_008709.1 1074583 1074867 D KEGG: vpa:VPA0923 hypothetical protein; hypothetical protein 1074583..1074867 Psychromonas ingrahamii 37 4626622 YP_942299.1 CDS Ping_0858 NC_008709.1 1075468 1075761 D PFAM: protein of unknown function DUF526; KEGG: ppr:PBPRA0086 hypothetical protein; hypothetical protein 1075468..1075761 Psychromonas ingrahamii 37 4624572 YP_942300.1 CDS Ping_0859 NC_008709.1 1075763 1076134 D KEGG: sde:Sde_0395 hypothetical protein; hypothetical protein 1075763..1076134 Psychromonas ingrahamii 37 4624573 YP_942301.1 CDS Ping_0860 NC_008709.1 1076210 1077139 R catalyzes the formation of putrescine from agmatine; agmatinase complement(1076210..1077139) Psychromonas ingrahamii 37 4624574 YP_942302.1 CDS Ping_0861 NC_008709.1 1077158 1079071 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(1077158..1079071) Psychromonas ingrahamii 37 4624575 YP_942303.1 CDS Ping_0862 NC_008709.1 1079378 1079743 R PFAM: protein of unknown function DUF1260; KEGG: vch:VC0424 hypothetical protein; hypothetical protein complement(1079378..1079743) Psychromonas ingrahamii 37 4624576 YP_942304.1 CDS Ping_0863 NC_008709.1 1079756 1080451 R KEGG: eca:ECA0346 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(1079756..1080451) Psychromonas ingrahamii 37 4624577 YP_942305.1 CDS Ping_0864 NC_008709.1 1080504 1082783 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(1080504..1082783) Psychromonas ingrahamii 37 4624578 YP_942306.1 CDS Ping_0865 NC_008709.1 1083138 1084415 R TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: msu:MS0910 glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde-2,1-aminomutase complement(1083138..1084415) Psychromonas ingrahamii 37 4624579 YP_942307.1 CDS Ping_0866 NC_008709.1 1085190 1086602 D Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 1085190..1086602 Psychromonas ingrahamii 37 4624580 YP_942308.1 CDS Ping_0867 NC_008709.1 1086729 1087085 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: vch:VC0627 HesB family protein; iron-sulfur cluster assembly accessory protein 1086729..1087085 Psychromonas ingrahamii 37 4624581 YP_942309.1 CDS Ping_0868 NC_008709.1 1087331 1088407 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cps:CPS_4621 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1087331..1088407 Psychromonas ingrahamii 37 4624582 YP_942310.1 CDS Ping_0869 NC_008709.1 1088410 1091526 D PFAM: acriflavin resistance protein; KEGG: pat:Patl_0619 acriflavin resistance protein; acriflavin resistance protein 1088410..1091526 Psychromonas ingrahamii 37 4624583 YP_942311.1 CDS Ping_0870 NC_008709.1 1091673 1092299 D PFAM: protein of unknown function UPF0126; KEGG: csa:Csal_0350 protein of unknown function UPF0126; hypothetical protein 1091673..1092299 Psychromonas ingrahamii 37 4624584 YP_942312.1 CDS Ping_0871 NC_008709.1 1092335 1092718 R PFAM: Rhodanese domain protein; KEGG: cps:CPS_3148 putative phage shock protein E; rhodanese domain-containing protein complement(1092335..1092718) Psychromonas ingrahamii 37 4624585 YP_942313.1 CDS Ping_0872 NC_008709.1 1092929 1094263 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 1092929..1094263 Psychromonas ingrahamii 37 4624586 YP_942314.1 CDS Ping_0873 NC_008709.1 1094353 1094781 R PFAM: ferric-uptake regulator; KEGG: vpa:VP0833 ferric uptake regulatory protein; Fur family ferric uptake regulator protein complement(1094353..1094781) Psychromonas ingrahamii 37 4624587 YP_942315.1 CDS Ping_0874 NC_008709.1 1094813 1095340 R TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: son:SO2330 flavodoxin; flavodoxin complement(1094813..1095340) Psychromonas ingrahamii 37 4625212 YP_942316.1 CDS Ping_0875 NC_008709.1 1095364 1095633 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: cps:CPS_1577 hypothetical protein; LexA regulated protein complement(1095364..1095633) Psychromonas ingrahamii 37 4625213 YP_942317.1 CDS Ping_0876 NC_008709.1 1095728 1095961 R KEGG: son:SO2332 hypothetical protein; hypothetical protein complement(1095728..1095961) Psychromonas ingrahamii 37 4625214 YP_942318.1 CDS Ping_0877 NC_008709.1 1096057 1096839 R PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: vfi:VF0814 esterase/lipase; alpha/beta hydrolase fold protein complement(1096057..1096839) Psychromonas ingrahamii 37 4625215 YP_942319.1 CDS Ping_0878 NC_008709.1 1097181 1097804 D PFAM: SeqA family protein; KEGG: hin:HI0192 seqA protein homolog; regulatory protein for replication initiation in SeqA family protein 1097181..1097804 Psychromonas ingrahamii 37 4625216 YP_942320.1 CDS Ping_0879 NC_008709.1 1098302 1099954 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1098302..1099954 Psychromonas ingrahamii 37 4625217 YP_942321.1 CDS Ping_0880 NC_008709.1 1100853 1103357 D KEGG: pat:Patl_2197 glycogen/starch/alpha-glucan phosphorylases; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 1100853..1103357 Psychromonas ingrahamii 37 4625218 YP_942322.1 CDS Ping_0881 NC_008709.1 1103517 1103813 D KEGG: son:SO2499 hypothetical protein; hypothetical protein 1103517..1103813 Psychromonas ingrahamii 37 4625219 YP_942323.1 CDS Ping_0882 NC_008709.1 1103992 1105311 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cps:CPS_3215 putative ATP-dependent RNA helicase SrmB; ATP-dependent RNA helicase 1103992..1105311 Psychromonas ingrahamii 37 4625220 YP_942324.1 CDS Ping_0883 NC_008709.1 1106617 1107990 D PFAM: HipA domain protein; KEGG: vch:VC0815 hypothetical protein; HipA domain-containing protein 1106617..1107990 Psychromonas ingrahamii 37 4625221 YP_942325.1 CDS Ping_0884 NC_008709.1 1107987 1108550 D PFAM: helix-turn-helix domain protein; KEGG: vvy:VV0797 predicted transcriptional regulator; DNA-binding transcriptional regulator 1107987..1108550 Psychromonas ingrahamii 37 4625222 YP_942326.1 CDS Ping_0885 NC_008709.1 1109424 1110155 D hypothetical protein 1109424..1110155 Psychromonas ingrahamii 37 4625223 YP_942327.1 CDS Ping_0886 NC_008709.1 1110837 1111787 D PFAM: Auxin Efflux Carrier; KEGG: son:SO2620 hypothetical protein; auxin efflux carrier 1110837..1111787 Psychromonas ingrahamii 37 4625225 YP_942328.1 CDS Ping_0887 NC_008709.1 1111965 1113305 R PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vfi:VF0924 transport protein; Na+/H+ antiporter NhaC complement(1111965..1113305) Psychromonas ingrahamii 37 4625226 YP_942329.1 CDS Ping_0888 NC_008709.1 1113574 1114134 R PFAM: Rhomboid family protein; KEGG: cps:CPS_2148 membrane protein, Rhomboid family; rhomboid family protein complement(1113574..1114134) Psychromonas ingrahamii 37 4625227 YP_942330.1 CDS Ping_0889 NC_008709.1 1114164 1114790 D PFAM: DTW domain containing protein; KEGG: ppr:PBPRA2629 hypothetical protein; DTW domain-containing protein 1114164..1114790 Psychromonas ingrahamii 37 4625228 YP_942331.1 CDS Ping_0890 NC_008709.1 1114832 1115248 D PFAM: Class I peptide chain release factor; KEGG: ppr:PBPRB0779 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 1114832..1115248 Psychromonas ingrahamii 37 4625229 YP_942332.1 CDS Ping_0891 NC_008709.1 1115528 1116526 D KEGG: ppr:PBPRB1179 hypothetical protein; hypothetical protein 1115528..1116526 Psychromonas ingrahamii 37 4625230 YP_942333.1 CDS Ping_0892 NC_008709.1 1117028 1117660 D PFAM: protein of unknown function, Spy-related; KEGG: ddi:DDB0167328 hypothetical protein; envelope stress induced periplasmic protein 1117028..1117660 Psychromonas ingrahamii 37 4624380 YP_942334.1 CDS Ping_0893 NC_008709.1 1117964 1120045 D KEGG: syd:Syncc9605_0815 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 1117964..1120045 Psychromonas ingrahamii 37 4624381 YP_942335.1 CDS Ping_0894 NC_008709.1 1120264 1121721 R KEGG: vch:VC2279 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase complement(1120264..1121721) Psychromonas ingrahamii 37 4624382 YP_942336.1 CDS Ping_0895 NC_008709.1 1121841 1121957 D KEGG: son:SO2010 hypothetical protein; hypothetical protein 1121841..1121957 Psychromonas ingrahamii 37 4624383 YP_942337.1 CDS Ping_0896 NC_008709.1 1122191 1123327 D TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; KEGG: vch:VC2390 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 1122191..1123327 Psychromonas ingrahamii 37 4624384 YP_942338.1 CDS carB NC_008709.1 1123370 1126600 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1123370..1126600 Psychromonas ingrahamii 37 4624385 YP_942339.1 CDS Ping_0898 NC_008709.1 1126789 1127298 R KEGG: son:SO2804 hypothetical protein; hypothetical protein complement(1126789..1127298) Psychromonas ingrahamii 37 4624386 YP_942340.1 CDS Ping_0899 NC_008709.1 1127327 1129723 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: pat:Patl_1779 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2 1127327..1129723 Psychromonas ingrahamii 37 4624387 YP_942341.1 CDS Ping_0900 NC_008709.1 1129743 1131494 D KEGG: plu:plu1630 probable transport ATP-binding protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 1129743..1131494 Psychromonas ingrahamii 37 4624388 YP_942342.1 CDS Ping_0901 NC_008709.1 1131494 1132456 D KEGG: vch:VC1877 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 1131494..1132456 Psychromonas ingrahamii 37 4624389 YP_942343.1 CDS Ping_0902 NC_008709.1 1132450 1132629 D PFAM: protein of unknown function DUF343; KEGG: ppr:PBPRA2383 hypothetical protein; hypothetical protein 1132450..1132629 Psychromonas ingrahamii 37 4624390 YP_942344.1 CDS Ping_0903 NC_008709.1 1132631 1133398 D KEGG: vvu:VV12088 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1132631..1133398 Psychromonas ingrahamii 37 4624391 YP_942345.1 CDS Ping_0904 NC_008709.1 1133407 1134345 D KEGG: sdn:Sden_0701 hypothetical protein; lipoprotein 1133407..1134345 Psychromonas ingrahamii 37 4624392 YP_942346.1 CDS Ping_0905 NC_008709.1 1134358 1135257 D KEGG: cps:CPS_4187 putative ATP synthase F0, A subunit; ATP synthase F0, H+-transporting two-sector ATPase A subunit 1134358..1135257 Psychromonas ingrahamii 37 4624393 YP_942347.1 CDS Ping_0906 NC_008709.1 1135349 1137061 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1135349..1137061 Psychromonas ingrahamii 37 4624394 YP_942348.1 CDS Ping_0907 NC_008709.1 1137178 1137939 D PFAM: regulatory protein, DeoR; KEGG: eca:ECA1907 DeoR-family transcriptional regulator; DeoR family transcriptional regulator 1137178..1137939 Psychromonas ingrahamii 37 4624395 YP_942349.1 CDS Ping_0908 NC_008709.1 1138033 1139124 R TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein, HSR1-related; Protein of unknown function DUF933; KEGG: cps:CPS_3560 GTP-binding protein YchF; GTP-binding protein YchF complement(1138033..1139124) Psychromonas ingrahamii 37 4624396 YP_942350.1 CDS Ping_0909 NC_008709.1 1139177 1139770 R PFAM: peptidyl-tRNA hydrolase; KEGG: vvy:VV0925 peptidyl-tRNA hydrolase; aminoacyl-tRNA hydrolase complement(1139177..1139770) Psychromonas ingrahamii 37 4624397 YP_942351.1 CDS Ping_0910 NC_008709.1 1139773 1140384 R TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: pat:Patl_2569 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 complement(1139773..1140384) Psychromonas ingrahamii 37 4624398 YP_942352.1 CDS Ping_0911 NC_008709.1 1140666 1141610 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1140666..1141610) Psychromonas ingrahamii 37 4623566 YP_942353.1 CDS Ping_0912 NC_008709.1 1141705 1142559 R KEGG: vfi:VF0765 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(1141705..1142559) Psychromonas ingrahamii 37 4623567 YP_942354.1 CDS Ping_0913 NC_008709.1 1142942 1143553 R PFAM: outer membrane lipoprotein LolB; KEGG: vfi:VF0766 outer-membrane lipoprotein LolB; outer membrane lipoprotein LolB complement(1142942..1143553) Psychromonas ingrahamii 37 4623568 YP_942355.1 CDS Ping_0914 NC_008709.1 1143993 1145669 R TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: vvu:VV10367 DNA repair protein RecN; DNA repair protein RecN complement(1143993..1145669) Psychromonas ingrahamii 37 4623569 YP_942356.1 CDS Ping_0915 NC_008709.1 1145784 1146683 R PFAM: ATP-NAD/AcoX kinase; KEGG: pat:Patl_1715 NAD(+) kinase; NAD(+) kinase complement(1145784..1146683) Psychromonas ingrahamii 37 4623570 YP_942357.1 CDS grpE NC_008709.1 1146899 1147519 D PFAM: GrpE protein; KEGG: pha:PSHAa1222 HSP 24 DnaK nucleotide exchange factor; probable member of the DnaK/DnaJ/GrpE foldase complex; co-chaperone GrpE 1146899..1147519 Psychromonas ingrahamii 37 4623571 YP_942358.1 CDS Ping_0917 NC_008709.1 1147741 1149663 D TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: vvy:VV0832 chaperone protein DnaK; chaperone protein DnaK 1147741..1149663 Psychromonas ingrahamii 37 4623572 YP_942359.1 CDS Ping_0918 NC_008709.1 1149792 1150925 D TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: vpa:VP0654 DnaJ protein; chaperone protein DnaJ 1149792..1150925 Psychromonas ingrahamii 37 4623573 YP_942360.1 CDS Ping_0919 NC_008709.1 1151467 1152087 D PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: sde:Sde_1555 peptidyl-prolyl cis-trans isomerase FklB; FKBP-type peptidylprolyl isomerase 1151467..1152087 Psychromonas ingrahamii 37 4623574 YP_942361.1 CDS Ping_0920 NC_008709.1 1152198 1152893 R PFAM: purine and other phosphorylases, family 1; KEGG: ppr:PBPRA0538 putative MTA/SAH nucleosidase; methylthioadenosine nucleosidase complement(1152198..1152893) Psychromonas ingrahamii 37 4623575 YP_942362.1 CDS Ping_0921 NC_008709.1 1153039 1154310 D KEGG: vfi:VF1727 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 1153039..1154310 Psychromonas ingrahamii 37 4623576 YP_942363.1 CDS Ping_0922 NC_008709.1 1154316 1154987 D hypothetical protein 1154316..1154987 Psychromonas ingrahamii 37 4623577 YP_942364.1 CDS Ping_0923 NC_008709.1 1155893 1156813 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase complement(1155893..1156813) Psychromonas ingrahamii 37 4623578 YP_942365.1 CDS Ping_0924 NC_008709.1 1157217 1159478 D sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 1157217..1159478 Psychromonas ingrahamii 37 4623579 YP_942366.1 CDS Ping_0925 NC_008709.1 1159603 1160568 D PFAM: peptidase S49; KEGG: hch:HCH_02138 periplasmic serine protease (ClpP class); peptidase S49 1159603..1160568 Psychromonas ingrahamii 37 4623580 YP_942367.1 CDS Ping_0926 NC_008709.1 1160659 1162104 R PFAM: peptidase M48, Ste24p; KEGG: ppr:PBPRA2902 hypothetical Zn-dependent protease; peptidase M48, Ste24p complement(1160659..1162104) Psychromonas ingrahamii 37 4623581 YP_942368.1 CDS Ping_0927 NC_008709.1 1162359 1162601 D hypothetical protein 1162359..1162601 Psychromonas ingrahamii 37 4623582 YP_942369.1 CDS Ping_0928 NC_008709.1 1162668 1163753 D PFAM: protein of unknown function UPF0118; KEGG: vfi:VF1921 transporter; permease 1162668..1163753 Psychromonas ingrahamii 37 4623583 YP_942370.1 CDS Ping_0929 NC_008709.1 1164725 1165201 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pat:Patl_2480 redoxin; bacterioferritin comigratory protein (Bcp) complement(1164725..1165201) Psychromonas ingrahamii 37 4623584 YP_942371.1 CDS Ping_0930 NC_008709.1 1165212 1166147 R with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE complement(1165212..1166147) Psychromonas ingrahamii 37 4624936 YP_942372.1 CDS Ping_0931 NC_008709.1 1166268 1167017 R Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator complement(1166268..1167017) Psychromonas ingrahamii 37 4624937 YP_942373.1 CDS Ping_0932 NC_008709.1 1167274 1167969 R KEGG: ppr:PBPRA1837 hypothetical protein; hypothetical protein complement(1167274..1167969) Psychromonas ingrahamii 37 4624938 YP_942374.1 CDS Ping_0933 NC_008709.1 1167962 1168174 R TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: son:SO2358 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein complement(1167962..1168174) Psychromonas ingrahamii 37 4624939 YP_942375.1 CDS Ping_0934 NC_008709.1 1168276 1170684 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: vvy:VV1676 cation transport ATPase; heavy metal translocating P-type ATPase complement(1168276..1170684) Psychromonas ingrahamii 37 4624940 YP_942376.1 CDS Ping_0935 NC_008709.1 1170681 1171160 R KEGG: vch:VC1438 hypothetical protein; hypothetical protein complement(1170681..1171160) Psychromonas ingrahamii 37 4624941 YP_942377.1 CDS Ping_0936 NC_008709.1 1171270 1172235 R TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: ppr:PBPRA1834 putative cytochrome c oxidase, subunit CcoP; cytochrome c oxidase, cbb3-type subunit III complement(1171270..1172235) Psychromonas ingrahamii 37 4624942 YP_942378.1 CDS Ping_0937 NC_008709.1 1172235 1172426 R PFAM: Cbb3-type cytochrome oxidase component; KEGG: cps:CPS_1993 cytochrome c oxidase, cbb3-type, CcoQ subunit; cbb3-type cytochrome oxidase subunit complement(1172235..1172426) Psychromonas ingrahamii 37 4624943 YP_942379.1 CDS Ping_0938 NC_008709.1 1172473 1173075 R TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: vfi:VF1300 cytochrome c oxidase, monoheme subunit, membrane-bound; cytochrome c oxidase, cbb3-type subunit II complement(1172473..1173075) Psychromonas ingrahamii 37 4624944 YP_942380.1 CDS Ping_0939 NC_008709.1 1173091 1174539 R TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: vch:VC1442 cytochrome c oxidase, subunit CcoN; cytochrome c oxidase, cbb3-type subunit I complement(1173091..1174539) Psychromonas ingrahamii 37 4624945 YP_942381.1 CDS Ping_0940 NC_008709.1 1174752 1175231 D KEGG: son:SO2365 hypothetical protein; hypothetical protein 1174752..1175231 Psychromonas ingrahamii 37 4624946 YP_942382.1 CDS Ping_0941 NC_008709.1 1175323 1175760 R PFAM: DoxX family protein; KEGG: ppr:PBPRA3518 putative transmembrane protein; DoxX family protein complement(1175323..1175760) Psychromonas ingrahamii 37 4624947 YP_942383.1 CDS Ping_0942 NC_008709.1 1175769 1176518 R KEGG: vpa:VP3016 hypothetical protein; hypothetical protein complement(1175769..1176518) Psychromonas ingrahamii 37 4624948 YP_942384.1 CDS Ping_0943 NC_008709.1 1176694 1177422 R PFAM: Allergen V5/Tpx-1 family protein; KEGG: ana:all1882 unknown protein; Allergen V5/Tpx-1 family protein complement(1176694..1177422) Psychromonas ingrahamii 37 4624949 YP_942385.1 CDS Ping_0944 NC_008709.1 1177523 1178377 R PFAM: protein of unknown function DUF692; KEGG: ppr:PBPRA3516 hypothetical protein; hypothetical protein complement(1177523..1178377) Psychromonas ingrahamii 37 4626766 YP_942386.1 CDS Ping_0945 NC_008709.1 1178474 1178737 R KEGG: vvy:VV3193 putative signal peptide protein; putative signal peptide protein complement(1178474..1178737) Psychromonas ingrahamii 37 4626767 YP_942387.1 CDS Ping_0946 NC_008709.1 1178957 1179523 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1178957..1179523 Psychromonas ingrahamii 37 4626768 YP_942388.1 CDS Ping_0947 NC_008709.1 1179516 1180082 D KEGG: ppr:PBPRA0959 hypothetical protein; hypothetical protein 1179516..1180082 Psychromonas ingrahamii 37 4626769 YP_942389.1 CDS Ping_0949 NC_008709.1 1183778 1186666 R KEGG: rfr:Rfer_0458 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(1183778..1186666) Psychromonas ingrahamii 37 4626782 YP_942390.1 CDS Ping_0950 NC_008709.1 1187341 1187988 R KEGG: vvy:VVA0115 hypothetical protein; hypothetical protein complement(1187341..1187988) Psychromonas ingrahamii 37 4626783 YP_942391.1 CDS Ping_0951 NC_008709.1 1188000 1188806 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: vvy:VVA0116 short chain dehydrogenase; short chain dehydrogenase complement(1188000..1188806) Psychromonas ingrahamii 37 4626659 YP_942392.1 CDS Ping_0952 NC_008709.1 1188796 1191027 R PFAM: AMP-dependent synthetase and ligase; KEGG: vvy:VVA0117 long-chain acyl-CoA synthetase; long-chain-fatty-acid--CoA ligase complement(1188796..1191027) Psychromonas ingrahamii 37 4626660 YP_942393.1 CDS Ping_0953 NC_008709.1 1191024 1191641 R KEGG: vvy:VVA0118 thermostable hemolysin; thermostable hemolysin complement(1191024..1191641) Psychromonas ingrahamii 37 4626661 YP_942394.1 CDS Ping_0954 NC_008709.1 1199244 1199672 D PFAM: UspA domain protein; KEGG: ppr:PBPRB0088 putative universal stress protein A; universal stress protein 1199244..1199672 Psychromonas ingrahamii 37 4626666 YP_942395.1 CDS Ping_0955 NC_008709.1 1199893 1200318 D PFAM: UspA domain protein; KEGG: vch:VC0076 universal stress protein A; universal stress protein 1199893..1200318 Psychromonas ingrahamii 37 4626667 YP_942396.1 CDS Ping_0956 NC_008709.1 1200629 1202533 D molecular chaperone; heat shock protein 90 1200629..1202533 Psychromonas ingrahamii 37 4626668 YP_942397.1 CDS Ping_0957 NC_008709.1 1202742 1203386 D KEGG: sdn:Sden_1430 adenylate kinases; TIGRFAM: adenylate kinases; PFAM: adenylate kinase; adenylate kinase, lid domain protein; adenylate kinase 1202742..1203386 Psychromonas ingrahamii 37 4626669 YP_942398.1 CDS Ping_0958 NC_008709.1 1203829 1204332 D PFAM: NLP/P60 protein; KEGG: vpa:VP1485 lipoprotein NlpC; NLP/P60 protein 1203829..1204332 Psychromonas ingrahamii 37 4626670 YP_942399.1 CDS Ping_0959 NC_008709.1 1204814 1205260 D PFAM: UspA domain protein; KEGG: vch:VC0076 universal stress protein A; universal stress protein 1204814..1205260 Psychromonas ingrahamii 37 4626671 YP_942400.1 CDS Ping_0960 NC_008709.1 1205472 1206599 R PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: yps:YPTB1059 hypothetical protein; cupin 4 family protein complement(1205472..1206599) Psychromonas ingrahamii 37 4626672 YP_942401.1 CDS Ping_0961 NC_008709.1 1206733 1208106 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(1206733..1208106) Psychromonas ingrahamii 37 4626673 YP_942402.1 CDS Ping_0962 NC_008709.1 1208161 1208790 R HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein complement(1208161..1208790) Psychromonas ingrahamii 37 4626674 YP_942403.1 CDS Ping_0963 NC_008709.1 1208842 1209945 R PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PP-loop domain protein; KEGG: yps:YPTB2430 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase complement(1208842..1209945) Psychromonas ingrahamii 37 4626675 YP_942404.1 CDS Ping_0964 NC_008709.1 1210316 1210702 R KEGG: son:SO1968 hypothetical protein; hypothetical protein complement(1210316..1210702) Psychromonas ingrahamii 37 4626676 YP_942405.1 CDS Ping_0965 NC_008709.1 1211011 1212732 D putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM 1211011..1212732 Psychromonas ingrahamii 37 4626677 YP_942406.1 CDS Ping_0967 NC_008709.1 1213725 1215650 D PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: vfi:VF2513 cyclic nucleotide binding protein/2 CBS domains; nucleotidyltransferase 1213725..1215650 Psychromonas ingrahamii 37 4626754 YP_942407.1 CDS Ping_0968 NC_008709.1 1215661 1216377 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1215661..1216377 Psychromonas ingrahamii 37 4626755 YP_942408.1 CDS Ping_0969 NC_008709.1 1216460 1218037 R TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: vfi:VF2515 glycine betaine transporter; choline/carnitine/betaine transporter complement(1216460..1218037) Psychromonas ingrahamii 37 4626756 YP_942409.1 CDS Ping_0970 NC_008709.1 1218298 1218954 R KEGG: deh:cbdb_A1523 hypothetical membrane protein; hypothetical protein complement(1218298..1218954) Psychromonas ingrahamii 37 4626757 YP_942410.1 CDS Ping_0971 NC_008709.1 1219076 1220002 R phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase complement(1219076..1220002) Psychromonas ingrahamii 37 4626525 YP_942411.1 CDS Ping_0972 NC_008709.1 1220122 1221579 R TIGRFAM: PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: vch:VCA0653 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC complement(1220122..1221579) Psychromonas ingrahamii 37 4626526 YP_942412.1 CDS scrR NC_008709.1 1221829 1222842 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vch:VCA0654 sucrose operon repressor ScrR, putative; sucrose operon repressor ScrR 1221829..1222842 Psychromonas ingrahamii 37 4626527 YP_942413.1 CDS Ping_0974 NC_008709.1 1222991 1224628 D KEGG: vch:VCA0655 sucrose-6-phosphate dehydrogenase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein; SMART: glycoside hydrolase, family 32; sucrose-6-phosphate hydrolase 1222991..1224628 Psychromonas ingrahamii 37 4626528 YP_942414.1 CDS Ping_0975 NC_008709.1 1224850 1225176 R hypothetical protein complement(1224850..1225176) Psychromonas ingrahamii 37 4626529 YP_942415.1 CDS modF NC_008709.1 1225549 1226928 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_1777 putative molybdenum ABC transporter, ATP-binding protein ModF; molybdenum ABC transporter ATP-binding protein ModF 1225549..1226928 Psychromonas ingrahamii 37 4626530 YP_942416.1 CDS Ping_0977 NC_008709.1 1227423 1227893 R KEGG: bxe:Bxe_A2422 hypothetical protein; hypothetical protein complement(1227423..1227893) Psychromonas ingrahamii 37 4626531 YP_942417.1 CDS Ping_0978 NC_008709.1 1228926 1229894 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: tte:TTE1717 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; response regulator receiver modulated diguanylate cyclase complement(1228926..1229894) Psychromonas ingrahamii 37 4626532 YP_942418.1 CDS Ping_0979 NC_008709.1 1229904 1234628 R PFAM: extracellular solute-binding protein, family 3; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: wsu:WS0850 sensory transduction histidine kinase; sensor histidine kinase complement(1229904..1234628) Psychromonas ingrahamii 37 4626568 YP_942419.1 CDS Ping_0980 NC_008709.1 1235649 1236401 R KEGG: vvu:VV12436 hypothetical protein; hypothetical protein complement(1235649..1236401) Psychromonas ingrahamii 37 4626569 YP_942420.1 CDS Ping_0981 NC_008709.1 1236498 1237193 R hypothetical protein complement(1236498..1237193) Psychromonas ingrahamii 37 4626570 YP_942421.1 CDS Ping_0982 NC_008709.1 1238080 1238742 R PFAM: pseudouridine synthase; KEGG: pat:Patl_2378 pseudouridine synthase, Rsu; pseudouridine synthase complement(1238080..1238742) Psychromonas ingrahamii 37 4626571 YP_942422.1 CDS Ping_0983 NC_008709.1 1239038 1241266 D KEGG: son:SO2629 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 1239038..1241266 Psychromonas ingrahamii 37 4626572 YP_942423.1 CDS mtlR NC_008709.1 1241522 1242061 R Acts as a repressor of the mtlAD operon; mannitol repressor protein complement(1241522..1242061) Psychromonas ingrahamii 37 4626573 YP_942424.1 CDS Ping_0985 NC_008709.1 1242357 1243766 R TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: vpa:VP0370 PTS system, mannitol-specific IIABC component; PTS system, mannitol-specific IIABC protein complement(1242357..1243766) Psychromonas ingrahamii 37 4626574 YP_942425.1 CDS Ping_0986 NC_008709.1 1245348 1245827 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: vpa:VPA0766 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(1245348..1245827) Psychromonas ingrahamii 37 4626575 YP_942426.1 CDS Ping_0987 NC_008709.1 1246048 1247463 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: hch:HCH_00065 signal transduction histidine kinase; sensor histidine kinase 1246048..1247463 Psychromonas ingrahamii 37 4626576 YP_942427.1 CDS baeR NC_008709.1 1247467 1248150 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_2868 response regulator receiver:transcriptional regulatory protein, C-terminal; response regulator BaeR 1247467..1248150 Psychromonas ingrahamii 37 4626577 YP_942428.1 CDS Ping_0989 NC_008709.1 1248602 1249282 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: pha:PSHAb0174 putative oxidoreductase, NAD(P)-binding domain; short-chain dehydrogenase/reductase SDR 1248602..1249282 Psychromonas ingrahamii 37 4626578 YP_942429.1 CDS Ping_0991 NC_008709.1 1249878 1250462 D PFAM: Calcium-binding EF-hand-containing protein; KEGG: xcb:XC_3100 hypothetical protein; calcium-binding EF-hand-containing protein 1249878..1250462 Psychromonas ingrahamii 37 4626580 YP_942430.1 CDS Ping_0992 NC_008709.1 1250582 1251025 R KEGG: ppr:PBPRB0693 hypothetical protein; hypothetical protein complement(1250582..1251025) Psychromonas ingrahamii 37 4626581 YP_942431.1 CDS Ping_0993 NC_008709.1 1251166 1251711 R KEGG: pat:Patl_3405 hypothetical protein; hypothetical protein complement(1251166..1251711) Psychromonas ingrahamii 37 4626582 YP_942432.1 CDS Ping_0994 NC_008709.1 1252014 1252562 D SMART: peptidase S16, lon domain protein; KEGG: son:SO1987 ATP-dependent protease La (LON) domain protein; peptidase S16, lon domain-containing protein 1252014..1252562 Psychromonas ingrahamii 37 4626583 YP_942433.1 CDS Ping_0995 NC_008709.1 1252673 1253293 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1252673..1253293 Psychromonas ingrahamii 37 4626584 YP_942434.1 CDS Ping_0996 NC_008709.1 1253286 1253936 D TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: son:SO1985 transcriptional activator, putative; anti-ECFsigma factor ChrR 1253286..1253936 Psychromonas ingrahamii 37 4626585 YP_942435.1 CDS Ping_0997 NC_008709.1 1253986 1254942 D PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: son:SO3386 hypothetical protein; hypothetical protein 1253986..1254942 Psychromonas ingrahamii 37 4626250 YP_942436.1 CDS Ping_0998 NC_008709.1 1254979 1256340 D PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: son:SO3384 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase 1254979..1256340 Psychromonas ingrahamii 37 4626251 YP_942437.1 CDS Ping_0999 NC_008709.1 1256343 1256768 D KEGG: vfi:VFA0764 hypothetical transcriptional regulatory protein; transcriptional regulator 1256343..1256768 Psychromonas ingrahamii 37 4626252 YP_942438.1 CDS Ping_1000 NC_008709.1 1256765 1257487 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: pha:PSHAb0455 hypothetical protein; short-chain dehydrogenase/reductase SDR 1256765..1257487 Psychromonas ingrahamii 37 4626253 YP_942439.1 CDS Ping_1001 NC_008709.1 1257484 1258740 D PFAM: amine oxidase; KEGG: vfi:VFA0762 putative dehydrogenase; amine oxidase 1257484..1258740 Psychromonas ingrahamii 37 4626254 YP_942440.1 CDS Ping_1002 NC_008709.1 1258765 1259514 D PFAM: protein of unknown function DUF1365; KEGG: vfi:VFA0761 plasmid partition ParA protein; hypothetical protein 1258765..1259514 Psychromonas ingrahamii 37 4626255 YP_942441.1 CDS Ping_1003 NC_008709.1 1259504 1260745 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: vfi:VFA0760 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 1259504..1260745 Psychromonas ingrahamii 37 4626256 YP_942442.1 CDS Ping_1004 NC_008709.1 1260756 1261292 D KEGG: vfi:VFA0759 hypothetical membrane protein; hypothetical protein 1260756..1261292 Psychromonas ingrahamii 37 4626257 YP_942443.1 CDS Ping_1005 NC_008709.1 1261264 1261800 D KEGG: vfi:VFA0758 hypothetical membrane protein; hypothetical protein 1261264..1261800 Psychromonas ingrahamii 37 4626258 YP_942444.1 CDS Ping_1006 NC_008709.1 1261797 1262318 D KEGG: son:SO3376 hypothetical protein; hypothetical protein 1261797..1262318 Psychromonas ingrahamii 37 4626259 YP_942445.1 CDS Ping_1007 NC_008709.1 1263085 1267686 D PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ppr:PBPRA0542 putative glutamate synthase, large subunit; glutamate synthase 1263085..1267686 Psychromonas ingrahamii 37 4626260 YP_942446.1 CDS gltD NC_008709.1 1267688 1269157 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1267688..1269157 Psychromonas ingrahamii 37 4626261 YP_942447.1 CDS Ping_1009 NC_008709.1 1269300 1270865 D PFAM: Na+/H+ antiporter NhaC; KEGG: vfi:VF1630 Na(+)/H(+) antiporter; Na+/H+ antiporter NhaC 1269300..1270865 Psychromonas ingrahamii 37 4626262 YP_942448.1 CDS Ping_1010 NC_008709.1 1271067 1272329 D KEGG: psb:Psyr_3988 hypothetical protein; hypothetical protein 1271067..1272329 Psychromonas ingrahamii 37 4626263 YP_942449.1 CDS Ping_1011 NC_008709.1 1272359 1272979 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cps:CPS_4136 transporter, LysE family; lysine exporter protein LysE/YggA complement(1272359..1272979) Psychromonas ingrahamii 37 4626264 YP_942450.1 CDS Ping_1012 NC_008709.1 1273276 1274172 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 1273276..1274172 Psychromonas ingrahamii 37 4626265 YP_942451.1 CDS Ping_1013 NC_008709.1 1274344 1275912 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VFA0015 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(1274344..1275912) Psychromonas ingrahamii 37 4626266 YP_942452.1 CDS Ping_1014 NC_008709.1 1276275 1277936 R PFAM: AMP-dependent synthetase and ligase; KEGG: ype:YPO2074 long-chain-fatty-acid-CoA ligase; long-chain-fatty-acid--CoA ligase complement(1276275..1277936) Psychromonas ingrahamii 37 4626267 YP_942453.1 CDS Ping_1015 NC_008709.1 1278173 1278388 D PFAM: protein of unknown function DUF1458; KEGG: cps:CPS_0923 hypothetical protein; hypothetical protein 1278173..1278388 Psychromonas ingrahamii 37 4624158 YP_942454.1 CDS Ping_1016 NC_008709.1 1278613 1279149 R PFAM: Smr protein/MutS2; KEGG: vvy:VV2436 hypothetical protein; Smr protein/MutS2 complement(1278613..1279149) Psychromonas ingrahamii 37 4624159 YP_942455.1 CDS Ping_1017 NC_008709.1 1279206 1280117 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1279206..1280117 Psychromonas ingrahamii 37 4624160 YP_942456.1 CDS Ping_1018 NC_008709.1 1280230 1281318 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1280230..1281318 Psychromonas ingrahamii 37 4624161 YP_942457.1 CDS asmA NC_008709.1 1281556 1283478 R PFAM: AsmA family protein; KEGG: son:SO2566 AsmA protein; outer membrane protein assembly protein AsmA complement(1281556..1283478) Psychromonas ingrahamii 37 4624162 YP_942458.1 CDS Ping_1020 NC_008709.1 1284060 1285136 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cps:CPS_1308 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 1284060..1285136 Psychromonas ingrahamii 37 4624163 YP_942459.1 CDS Ping_1021 NC_008709.1 1285399 1287168 R PFAM: protein kinase; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: ppr:PBPRA2520 hypothetical protein; serine/threonine protein kinase complement(1285399..1287168) Psychromonas ingrahamii 37 4624164 YP_942460.1 CDS Ping_1022 NC_008709.1 1287267 1288736 R TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: ppr:PBPRA2521 hypothetical nitrate transporter; nitrite transporter complement(1287267..1288736) Psychromonas ingrahamii 37 4624165 YP_942461.1 CDS Ping_1023 NC_008709.1 1288810 1289142 R TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: ppr:PBPRA2522 putative nitrite reductase NADPH; nitrite reductase (NAD(P)H) small subunit complement(1288810..1289142) Psychromonas ingrahamii 37 4624166 YP_942462.1 CDS Ping_1024 NC_008709.1 1289153 1291678 R TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ppr:PBPRA2523 putative NAD(P)H-nitrite reductase, large subunit; nitrite reductase (NAD(P)H) large subunit complement(1289153..1291678) Psychromonas ingrahamii 37 4624167 YP_942463.1 CDS Ping_1025 NC_008709.1 1291702 1292583 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ppr:PBPRA2524 putative uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(1291702..1292583) Psychromonas ingrahamii 37 4624168 YP_942464.1 CDS Ping_1026 NC_008709.1 1293173 1295857 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ppr:PBPRA2525 hypothetical nitrate reductase large subunit; molybdopterin oxidoreductase 1293173..1295857 Psychromonas ingrahamii 37 4624169 YP_942465.1 CDS purU NC_008709.1 1296041 1296931 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1296041..1296931 Psychromonas ingrahamii 37 4624170 YP_942466.1 CDS Ping_1028 NC_008709.1 1297140 1297730 D KEGG: pha:PSHAa1583 peptide methionine sulfoxide reductase MsrA 2 (protein-methionine-S-oxide reductase 2) (peptide Met(O) reductase 2); TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 1297140..1297730 Psychromonas ingrahamii 37 4624171 YP_942467.1 CDS Ping_1029 NC_008709.1 1297829 1299361 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(1297829..1299361) Psychromonas ingrahamii 37 4624172 YP_942468.1 CDS Ping_1030 NC_008709.1 1299488 1301167 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(1299488..1301167) Psychromonas ingrahamii 37 4624173 YP_942469.1 CDS Ping_1031 NC_008709.1 1301238 1302284 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(1301238..1302284) Psychromonas ingrahamii 37 4624174 YP_942470.1 CDS Ping_1032 NC_008709.1 1302371 1303582 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(1302371..1303582) Psychromonas ingrahamii 37 4624175 YP_942471.1 CDS Ping_1033 NC_008709.1 1303737 1304441 R TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: ppr:PBPRA2169 putative histidine utilization repressor; histidine utilization repressor, GntR family transcriptional regulator complement(1303737..1304441) Psychromonas ingrahamii 37 4624176 YP_942472.1 CDS Ping_1034 NC_008709.1 1304820 1306304 D PFAM: peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: vfi:VF1457 thermostable carboxypeptidase 1; carboxypeptidase Taq 1304820..1306304 Psychromonas ingrahamii 37 4623894 YP_942473.1 CDS Ping_1035 NC_008709.1 1306426 1307406 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ppr:PBPRA0062 putative zinc-binding alcohol dehydrogenase; alcohol dehydrogenase 1306426..1307406 Psychromonas ingrahamii 37 4623895 YP_942474.1 CDS Ping_1036 NC_008709.1 1307481 1308422 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vfi:VF0021 transcriptional regulators, LysR family; LysR family transcriptional regulator complement(1307481..1308422) Psychromonas ingrahamii 37 4623896 YP_942475.1 CDS Ping_1037 NC_008709.1 1308678 1310054 R TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sde:Sde_3731 protease DO; protease Do complement(1308678..1310054) Psychromonas ingrahamii 37 4623897 YP_942476.1 CDS Ping_1038 NC_008709.1 1310191 1310499 R KEGG: neu:NE1156 bacterial regulatory proteins, MerR family; MerR family regulatory protein complement(1310191..1310499) Psychromonas ingrahamii 37 4623898 YP_942477.1 CDS Ping_1039 NC_008709.1 1310503 1311450 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mca:MCA1727 curved DNA-binding protein; heat shock protein DnaJ domain-containing protein complement(1310503..1311450) Psychromonas ingrahamii 37 4623899 YP_942478.1 CDS clpB-1 NC_008709.1 1311798 1314284 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: gka:GK0078 ATP-dependent Clp protease ATPase subunit; chaperone endopeptidase Clp ATP-binding chain B,ClpB 1311798..1314284 Psychromonas ingrahamii 37 4623900 YP_942479.1 CDS Ping_1041 NC_008709.1 1314351 1314920 R PFAM: YceI family protein; KEGG: vpa:VPA0850 hypothetical protein; hypothetical protein complement(1314351..1314920) Psychromonas ingrahamii 37 4623901 YP_942480.1 CDS Ping_1042 NC_008709.1 1314946 1315473 R PFAM: cytochrome B561; KEGG: vvy:VVA0735 cytochrome b561; cytochrome B561 complement(1314946..1315473) Psychromonas ingrahamii 37 4623902 YP_942481.1 CDS Ping_1043 NC_008709.1 1315687 1316328 R PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain; KEGG: vfi:VF1731 stringent starvation protein A; glutathione S-transferase complement(1315687..1316328) Psychromonas ingrahamii 37 4623903 YP_942482.1 CDS Ping_1044 NC_008709.1 1316806 1317792 R KEGG: pha:PSHAa0504 hypothetical protein; hypothetical protein complement(1316806..1317792) Psychromonas ingrahamii 37 4623904 YP_942483.1 CDS Ping_1045 NC_008709.1 1318477 1318968 D PFAM: dihydrofolate reductase region; KEGG: ilo:IL0478 dihydrofolate reductase; dihydrofolate reductase 1318477..1318968 Psychromonas ingrahamii 37 4623905 YP_942484.1 CDS apaH NC_008709.1 1318970 1319800 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(1318970..1319800) Psychromonas ingrahamii 37 4623906 YP_942485.1 CDS Ping_1047 NC_008709.1 1319803 1320615 R KEGG: pmu:PM1209 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase complement(1319803..1320615) Psychromonas ingrahamii 37 4623907 YP_942486.1 CDS Ping_1048 NC_008709.1 1320726 1321712 R KEGG: eca:ECA3858 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(1320726..1321712) Psychromonas ingrahamii 37 4623908 YP_942487.1 CDS Ping_1049 NC_008709.1 1321712 1323031 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sdn:Sden_2886 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1321712..1323031) Psychromonas ingrahamii 37 4623909 YP_942488.1 CDS Ping_1050 NC_008709.1 1323042 1325414 R PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: son:SO3636 organic solvent tolerance protein; organic solvent tolerance protein complement(1323042..1325414) Psychromonas ingrahamii 37 4625978 YP_942489.1 CDS Ping_1051 NC_008709.1 1325644 1326450 D PFAM: heat shock protein DnaJ domain protein; KEGG: ppr:PBPRA0406 putative DnaJ-related protein; heat shock protein DnaJ domain-containing protein 1325644..1326450 Psychromonas ingrahamii 37 4625979 YP_942490.1 CDS Ping_1052 NC_008709.1 1326908 1327936 D KEGG: vpa:VP2380 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1326908..1327936 Psychromonas ingrahamii 37 4625980 YP_942491.1 CDS Ping_1053 NC_008709.1 1327993 1328292 R PFAM: YCII-related; KEGG: pat:Patl_2835 YCII-related; hypothetical protein complement(1327993..1328292) Psychromonas ingrahamii 37 4625981 YP_942492.1 CDS Ping_1054 NC_008709.1 1328295 1328864 R TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: yps:YPTB2119 putative intracellular septation protein; intracellular septation protein A complement(1328295..1328864) Psychromonas ingrahamii 37 4625982 YP_942493.1 CDS Ping_1055 NC_008709.1 1328926 1329738 R KEGG: vvy:VV1216 tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase, alpha chain; tryptophan synthase subunit alpha complement(1328926..1329738) Psychromonas ingrahamii 37 4625983 YP_942494.1 CDS Ping_1056 NC_008709.1 1329738 1330925 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1329738..1330925) Psychromonas ingrahamii 37 4625984 YP_942495.1 CDS Ping_1057 NC_008709.1 1330985 1332394 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1330985..1332394) Psychromonas ingrahamii 37 4625985 YP_942496.1 CDS Ping_1058 NC_008709.1 1332388 1333410 R KEGG: vch:VC1172 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase, family 3; anthranilate phosphoribosyltransferase complement(1332388..1333410) Psychromonas ingrahamii 37 4625986 YP_942497.1 CDS Ping_1059 NC_008709.1 1333411 1334013 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: eca:ECA2297 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase complement(1333411..1334013) Psychromonas ingrahamii 37 4625987 YP_942498.1 CDS Ping_1060 NC_008709.1 1334018 1335682 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(1334018..1335682) Psychromonas ingrahamii 37 4625988 YP_942499.1 CDS Ping_1061 NC_008709.1 1336374 1337249 D PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: yps:YPTB2133 hypothetical protein; phosphotransferase domain-containing protein 1336374..1337249 Psychromonas ingrahamii 37 4625989 YP_942500.1 CDS Ping_1062 NC_008709.1 1337246 1337866 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: vch:VC1178 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 1337246..1337866 Psychromonas ingrahamii 37 4625990 YP_942501.1 CDS Ping_1063 NC_008709.1 1338084 1338965 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_3519 ribosomal large subunit pseudouridine synthase B; pseudouridine synthase 1338084..1338965 Psychromonas ingrahamii 37 4625991 YP_942502.1 CDS Ping_1064 NC_008709.1 1339132 1339959 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: vch:VC0395 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase GalU 1339132..1339959 Psychromonas ingrahamii 37 4625992 YP_942503.1 CDS murQ NC_008709.1 1340012 1340911 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase complement(1340012..1340911) Psychromonas ingrahamii 37 4625993 YP_942504.1 CDS Ping_1066 NC_008709.1 1341036 1341446 D PFAM: LrgA family protein; KEGG: pmu:PM0880 holin-like protein; LrgA family protein 1341036..1341446 Psychromonas ingrahamii 37 4625994 YP_942505.1 CDS Ping_1067 NC_008709.1 1341448 1342125 D PFAM: LrgB family protein; KEGG: eca:ECA2829 puatative membrane protein; LrgB family protein 1341448..1342125 Psychromonas ingrahamii 37 4625995 YP_942506.1 CDS Ping_1068 NC_008709.1 1342232 1342894 R TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: ppr:PBPRA2911 putative phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase complement(1342232..1342894) Psychromonas ingrahamii 37 4625996 YP_942507.1 CDS Ping_1069 NC_008709.1 1342901 1343947 R KEGG: pha:PSHAa1947 phosphoribosylaminoimidazole synthetase (AIR synthetase); TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine cyclo-ligase complement(1342901..1343947) Psychromonas ingrahamii 37 4625363 YP_942508.1 CDS Ping_1070 NC_008709.1 1344303 1345382 D KEGG: ppr:PBPRA2906 hypothetical protein; hypothetical protein 1344303..1345382 Psychromonas ingrahamii 37 4625364 YP_942509.1 CDS Ping_1071 NC_008709.1 1345395 1346123 D PFAM: Chromosomal replication initiator, DnaA; KEGG: sdy:SDY_2685 putative DNA replication factor; chromosomal replication initiator DnaA 1345395..1346123 Psychromonas ingrahamii 37 4625365 YP_942510.1 CDS Ping_1072 NC_008709.1 1346184 1346573 R KEGG: cps:CPS_3192 hypothetical protein; hypothetical protein complement(1346184..1346573) Psychromonas ingrahamii 37 4625366 YP_942511.1 CDS Ping_1073 NC_008709.1 1346819 1347175 R TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: pha:PSHAa1133 arsenate reductase; arsenate reductase complement(1346819..1347175) Psychromonas ingrahamii 37 4625367 YP_942512.1 CDS Ping_1074 NC_008709.1 1347222 1347662 R PFAM: protein of unknown function UPF0153; KEGG: sdn:Sden_1632 uncharacterised conserved protein UCP006173; hypothetical protein complement(1347222..1347662) Psychromonas ingrahamii 37 4625368 YP_942513.1 CDS Ping_1075 NC_008709.1 1347730 1348779 R TIGRFAM: lytic murein transglycosylase; KEGG: ilo:IL1824 membrane-bound lytic murein transglycosylase; lytic murein transglycosylase complement(1347730..1348779) Psychromonas ingrahamii 37 4625369 YP_942514.1 CDS Ping_1076 NC_008709.1 1348769 1349065 R PFAM: protein of unknown function DUF709; KEGG: sdn:Sden_1630 protein of unknown function DUF709; hypothetical protein complement(1348769..1349065) Psychromonas ingrahamii 37 4625370 YP_942515.1 CDS Ping_1077 NC_008709.1 1349187 1349888 D TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; Septum formation inhibitor MinC domain protein; KEGG: buc:BU327 cell division inhibitor minC; septum site-determining protein MinC 1349187..1349888 Psychromonas ingrahamii 37 4625371 YP_942516.1 CDS Ping_1078 NC_008709.1 1349898 1350710 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pha:PSHAb0506 cell division inhibitor, membrane ATPase, activates MinC; septum site-determining protein MinD 1349898..1350710 Psychromonas ingrahamii 37 4625372 YP_942517.1 CDS Ping_1079 NC_008709.1 1350712 1350978 D TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: pha:PSHAb0505 cell division topological specificity factor; cell division topological specificity factor MinE 1350712..1350978 Psychromonas ingrahamii 37 4625373 YP_942518.1 CDS Ping_1080 NC_008709.1 1351088 1351630 R PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: tcx:Tcr_0921 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(1351088..1351630) Psychromonas ingrahamii 37 4625374 YP_942519.1 CDS Ping_1081 NC_008709.1 1351655 1352248 R PFAM: Uncharacterized lipoprotein; KEGG: cps:CPS_0710 putative lipoprotein; hypothetical protein complement(1351655..1352248) Psychromonas ingrahamii 37 4625375 YP_942520.1 CDS Ping_1082 NC_008709.1 1353219 1355231 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1353219..1355231 Psychromonas ingrahamii 37 4625376 YP_942521.1 CDS Ping_1083 NC_008709.1 1355285 1355869 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sgl:SG1054 hypothetical protein; maf protein complement(1355285..1355869) Psychromonas ingrahamii 37 4625377 YP_942522.1 CDS Ping_1084 NC_008709.1 1356155 1356676 D PFAM: protein of unknown function DUF177; KEGG: ppr:PBPRA1190 conserved hypothetical protein; hypothetical protein 1356155..1356676 Psychromonas ingrahamii 37 4625378 YP_942523.1 CDS Ping_1085 NC_008709.1 1356695 1356868 D TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: pat:Patl_2126 ribosomal protein L32; 50S ribosomal protein L32 1356695..1356868 Psychromonas ingrahamii 37 4625379 YP_942524.1 CDS Ping_1086 NC_008709.1 1356904 1357944 D TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: son:SO2779 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 1356904..1357944 Psychromonas ingrahamii 37 4625380 YP_942525.1 CDS Ping_1087 NC_008709.1 1357937 1358896 D KEGG: ssn:SSO_1111 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 1357937..1358896 Psychromonas ingrahamii 37 4625381 YP_942526.1 CDS Ping_1088 NC_008709.1 1358934 1359875 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: ppr:PBPRA1194 putative malonyl Coa-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1358934..1359875 Psychromonas ingrahamii 37 4625801 YP_942527.1 CDS Ping_1089 NC_008709.1 1359878 1360612 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: vpa:VP2054 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 1359878..1360612 Psychromonas ingrahamii 37 4625802 YP_942528.1 CDS Ping_1090 NC_008709.1 1360787 1361020 D TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: vvy:VV1276 acyl carrier protein; acyl carrier protein 1360787..1361020 Psychromonas ingrahamii 37 4625803 YP_942529.1 CDS Ping_1091 NC_008709.1 1361191 1362432 D PFAM: beta-ketoacyl synthase; KEGG: stm:STM1197 3-oxoacyl-[acyl-carrier-protein] synthase II; beta-ketoacyl synthase 1361191..1362432 Psychromonas ingrahamii 37 4625804 YP_942530.1 CDS Ping_1092 NC_008709.1 1362505 1363341 D PFAM: aminotransferase, class IV; KEGG: pat:Patl_2119 aminotransferase, class IV; class IV aminotransferase 1362505..1363341 Psychromonas ingrahamii 37 4625805 YP_942531.1 CDS Ping_1093 NC_008709.1 1363331 1364329 D PFAM: aminodeoxychorismate lyase; KEGG: vpa:VP2050 hypothetical protein; aminodeoxychorismate lyase 1363331..1364329 Psychromonas ingrahamii 37 4625806 YP_942532.1 CDS Ping_1094 NC_008709.1 1364334 1365005 D PFAM: thymidylate kinase; KEGG: plu:plu2828 thymidylate kinase; dTMP kinase 1364334..1365005 Psychromonas ingrahamii 37 4625807 YP_942533.1 CDS Ping_1095 NC_008709.1 1365007 1366035 D TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: sdy:SDY_2051 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 1365007..1366035 Psychromonas ingrahamii 37 4625808 YP_942534.1 CDS Ping_1096 NC_008709.1 1366200 1366976 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: ppr:PBPRA1202 putative deoxyribonuclease; deoxyribonuclease of TatD family protein 1366200..1366976 Psychromonas ingrahamii 37 4625809 YP_942535.1 CDS Ping_1097 NC_008709.1 1367823 1368026 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: pat:Patl_3733 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1367823..1368026 Psychromonas ingrahamii 37 4625810 YP_942536.1 CDS Ping_1098 NC_008709.1 1368748 1369335 R KEGG: cps:CPS_3322 hypothetical protein; hypothetical protein complement(1368748..1369335) Psychromonas ingrahamii 37 4625811 YP_942537.1 CDS Ping_1099 NC_008709.1 1369811 1370476 R TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: pha:PSHAa1116 regulator protein; exsB protein complement(1369811..1370476) Psychromonas ingrahamii 37 4625812 YP_942538.1 CDS Ping_1100 NC_008709.1 1370597 1371337 D PFAM: Radical SAM domain protein; KEGG: vfi:VFA0495 queuosine biosynthesis protein QueE; radical SAM protein 1370597..1371337 Psychromonas ingrahamii 37 4625813 YP_942539.1 CDS Ping_1101 NC_008709.1 1371809 1375699 D KEGG: ecj:JW5905 ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like; ATP-dependent helicase HrpA 1371809..1375699 Psychromonas ingrahamii 37 4625814 YP_942540.1 CDS Ping_1102 NC_008709.1 1376400 1377236 R TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: ssn:SSO_1947 formyltetrahydrofolate deformylase; for PurT-dependent FGAR synthesis; formyltetrahydrofolate deformylase complement(1376400..1377236) Psychromonas ingrahamii 37 4626232 YP_942541.1 CDS Ping_1103 NC_008709.1 1377273 1377749 R PFAM: SEC-C motif domain protein; KEGG: vpa:VP1145 hypothetical protein; SecC motif-containing protein complement(1377273..1377749) Psychromonas ingrahamii 37 4626233 YP_942542.1 CDS asnB NC_008709.1 1377823 1379493 R functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B complement(1377823..1379493) Psychromonas ingrahamii 37 4626234 YP_942543.1 CDS kefC NC_008709.1 1379680 1381341 R PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: son:SO0695 glutathione-regulated potassium-efflux system protein KefC, putative; glutathione-regulated potassium-efflux system protein KefC complement(1379680..1381341) Psychromonas ingrahamii 37 4626235 YP_942544.1 CDS Ping_1106 NC_008709.1 1381472 1383043 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: ecc:c1269 hypothetical protein; TPR repeat- and Sel1 domain-containing protein complement(1381472..1383043) Psychromonas ingrahamii 37 4626236 YP_942545.1 CDS Ping_1108 NC_008709.1 1384945 1385196 R PFAM: ferredoxin; KEGG: vvy:VV1242 ferredoxin; ferredoxin complement(1384945..1385196) Psychromonas ingrahamii 37 4626238 YP_942546.1 CDS nrdB NC_008709.1 1385206 1386351 R B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta complement(1385206..1386351) Psychromonas ingrahamii 37 4626239 YP_942547.1 CDS Ping_1110 NC_008709.1 1387053 1388057 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pmu:PM1325 D-allose binding periplasmic protein; LacI family transcriptional regulator 1387053..1388057 Psychromonas ingrahamii 37 4626240 YP_942548.1 CDS Ping_1111 NC_008709.1 1388076 1390940 D KEGG: tel:tll0627 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1388076..1390940 Psychromonas ingrahamii 37 4626241 YP_942549.1 CDS Ping_1112 NC_008709.1 1391267 1393540 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(1391267..1393540) Psychromonas ingrahamii 37 4626242 YP_942550.1 CDS Ping_1113 NC_008709.1 1394396 1395121 R KEGG: sdn:Sden_1949 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase complement(1394396..1395121) Psychromonas ingrahamii 37 4626243 YP_942551.1 CDS Ping_1114 NC_008709.1 1395500 1398196 D TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: pha:PSHAa1421 DNA gyrase, subunit A, type II topoisomerase; DNA gyrase subunit A 1395500..1398196 Psychromonas ingrahamii 37 4626244 YP_942552.1 CDS Ping_1115 NC_008709.1 1398511 1399599 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1398511..1399599 Psychromonas ingrahamii 37 4626245 YP_942553.1 CDS Ping_1116 NC_008709.1 1399716 1400828 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1399716..1400828 Psychromonas ingrahamii 37 4626246 YP_942554.1 CDS Ping_1117 NC_008709.1 1400837 1402123 D TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: vfi:VF1761 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 1400837..1402123 Psychromonas ingrahamii 37 4626247 YP_942555.1 CDS Ping_1118 NC_008709.1 1402902 1403300 D hypothetical protein 1402902..1403300 Psychromonas ingrahamii 37 4626248 YP_942556.1 CDS Ping_1119 NC_008709.1 1403760 1404158 D periplasmic thioredoxin of cytochrome c-type biogenesis 1403760..1404158 Psychromonas ingrahamii 37 4626249 YP_942557.1 CDS Ping_1121 NC_008709.1 1404550 1405467 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pha:PSHAa0644 two-component response regulator with GGDEF domain; diguanylate cyclase 1404550..1405467 Psychromonas ingrahamii 37 4625041 YP_942558.1 CDS Ping_1122 NC_008709.1 1406409 1407452 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1406409..1407452 Psychromonas ingrahamii 37 4625042 YP_942559.1 CDS Ping_1123 NC_008709.1 1407645 1408625 D TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: ppr:PBPRA3269 putative rod shape-determining protein MreC; rod shape-determining protein MreC 1407645..1408625 Psychromonas ingrahamii 37 4625043 YP_942560.1 CDS Ping_1124 NC_008709.1 1408690 1409091 D PFAM: Rod shape-determining protein MreD; KEGG: cps:CPS_4558 rod shape-determining protein MreD; rod shape-determining protein MreD 1408690..1409091 Psychromonas ingrahamii 37 4625044 YP_942561.1 CDS Ping_1125 NC_008709.1 1409094 1409672 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sdy:SDY_3423 hypothetical protein; maf protein 1409094..1409672 Psychromonas ingrahamii 37 4625045 YP_942562.1 CDS Ping_1126 NC_008709.1 1410031 1411506 D involved in the processing of the 5'end of 16S rRNA; ribonuclease G 1410031..1411506 Psychromonas ingrahamii 37 4625046 YP_942563.1 CDS Ping_1127 NC_008709.1 1411589 1415473 D KEGG: ppr:PBPRA3265 hypothetical membrane protein; hypothetical protein 1411589..1415473 Psychromonas ingrahamii 37 4625047 YP_942564.1 CDS Ping_1128 NC_008709.1 1415617 1416441 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: vfi:VF0378 beta-ureidopropionase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1415617..1416441 Psychromonas ingrahamii 37 4625048 YP_942565.1 CDS Ping_1129 NC_008709.1 1416461 1417906 D PFAM: peptidase U62, modulator of DNA gyrase; KEGG: vch:VC0422 TldD protein; C69 family peptidase 1416461..1417906 Psychromonas ingrahamii 37 4625049 YP_942566.1 CDS Ping_1130 NC_008709.1 1418079 1418705 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: tcx:Tcr_1076 channel protein, hemolysin III family; hemolysin III family channel protein 1418079..1418705 Psychromonas ingrahamii 37 4625050 YP_942567.1 CDS Ping_1131 NC_008709.1 1418820 1419326 R PFAM: protein of unknown function DUF615; KEGG: hdu:HD1362 hypothetical protein; hypothetical protein complement(1418820..1419326) Psychromonas ingrahamii 37 4625051 YP_942568.1 CDS Ping_1132 NC_008709.1 1419651 1420976 D PFAM: peptidase U62, modulator of DNA gyrase; KEGG: yps:YPTB3541 putative modulator of DNA gyrase; C69 family peptidase 1419651..1420976 Psychromonas ingrahamii 37 4625052 YP_942569.1 CDS Ping_1133 NC_008709.1 1421032 1421814 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: vvu:VV10280 rare lipoprotein A; rare lipoprotein A complement(1421032..1421814) Psychromonas ingrahamii 37 4625053 YP_942570.1 CDS Ping_1134 NC_008709.1 1421821 1422921 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: cps:CPS_1714 rod shape-determining protein RodA; rod shape-determining protein RodA complement(1421821..1422921) Psychromonas ingrahamii 37 4625054 YP_942571.1 CDS Ping_1135 NC_008709.1 1422924 1424810 R PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: ppr:PBPRA2890 putative penicillin-binding protein 2; Fis family transcriptional regulator complement(1422924..1424810) Psychromonas ingrahamii 37 4625055 YP_942572.1 CDS Ping_1136 NC_008709.1 1424817 1425287 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(1424817..1425287) Psychromonas ingrahamii 37 4623877 YP_942573.1 CDS Ping_1137 NC_008709.1 1425287 1425613 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: son:SO1170 iojap domain protein; iojap family protein complement(1425287..1425613) Psychromonas ingrahamii 37 4623878 YP_942574.1 CDS Ping_1138 NC_008709.1 1425916 1426374 D TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: pat:Patl_3528 MraZ protein; MraZ protein 1425916..1426374 Psychromonas ingrahamii 37 4623879 YP_942575.1 CDS Ping_1139 NC_008709.1 1426374 1427321 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: eca:ECA3823 S-adenosyl-methyltransferase; S-adenosyl-methyltransferase MraW 1426374..1427321 Psychromonas ingrahamii 37 4623880 YP_942576.1 CDS Ping_1140 NC_008709.1 1427401 1427637 D PFAM: cell division protein FtsL; KEGG: son:SO4226 cell division protein FtsL; cell division protein FtsL 1427401..1427637 Psychromonas ingrahamii 37 4623881 YP_942577.1 CDS Ping_1141 NC_008709.1 1427634 1429466 D PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sdn:Sden_0349 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 1427634..1429466 Psychromonas ingrahamii 37 4623882 YP_942578.1 CDS Ping_1142 NC_008709.1 1429469 1430998 D TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: msu:MS1672 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramyl-tripeptide synthetases 1429469..1430998 Psychromonas ingrahamii 37 4623883 YP_942579.1 CDS Ping_1143 NC_008709.1 1431075 1432544 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: pat:Patl_3523 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 1431075..1432544 Psychromonas ingrahamii 37 4623884 YP_942580.1 CDS Ping_1144 NC_008709.1 1432584 1433666 D KEGG: pha:PSHAa2507 phospho-N-acetylmuramoyl-pentapeptide transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4; phospho-N-acetylmuramoyl-pentapeptide- transferase 1432584..1433666 Psychromonas ingrahamii 37 4623885 YP_942581.1 CDS Ping_1145 NC_008709.1 1433668 1435005 D TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: ppr:PBPRA3217 putative UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1433668..1435005 Psychromonas ingrahamii 37 4623886 YP_942582.1 CDS Ping_1146 NC_008709.1 1435005 1436225 D TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: vch:VC2402 cell division protein FtsW; cell division protein FtsW 1435005..1436225 Psychromonas ingrahamii 37 4623887 YP_942583.1 CDS Ping_1147 NC_008709.1 1436215 1437282 D KEGG: son:SO4219 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase, family 28; Glycosyltransferase 28, C-terminal domain; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1436215..1437282 Psychromonas ingrahamii 37 4623888 YP_942584.1 CDS Ping_1148 NC_008709.1 1437340 1438803 D TIGRFAM: UDP-N-acetylmuramate--alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: vpa:VP0461 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 1437340..1438803 Psychromonas ingrahamii 37 4623889 YP_942585.1 CDS Ping_1149 NC_008709.1 1438800 1439720 D KEGG: pat:Patl_3517 D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; PFAM: phosphoribosylglycinamide synthetase; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1438800..1439720 Psychromonas ingrahamii 37 4623890 YP_942586.1 CDS ftsQ NC_008709.1 1439725 1440462 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: ppr:PBPRA3213 hypothetical cell division protein FtsQ; cell division protein FtsQ 1439725..1440462 Psychromonas ingrahamii 37 4623891 YP_942587.1 CDS ftsA NC_008709.1 1440520 1441785 D PFAM: cell division protein FtsA; KEGG: eca:ECA3811 cell division protein; cell division ATP-binding protein FtsA 1440520..1441785 Psychromonas ingrahamii 37 4623892 YP_942588.1 CDS ftsZ NC_008709.1 1441820 1442986 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: cps:CPS_4459 cell division protein FtsZ; cell division GTP-binding tubulin-like protein FtsZ 1441820..1442986 Psychromonas ingrahamii 37 4623893 YP_942589.1 CDS lpxC NC_008709.1 1443071 1443997 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1443071..1443997 Psychromonas ingrahamii 37 4624542 YP_942590.1 CDS Ping_1154 NC_008709.1 1444049 1444513 R KEGG: ppr:PBPRA3209 hypothetical protein; hypothetical protein complement(1444049..1444513) Psychromonas ingrahamii 37 4624543 YP_942591.1 CDS Ping_1155 NC_008709.1 1444874 1447594 D TIGRFAM: preprotein translocase, SecA subunit; PFAM: helicase domain protein; SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: son:SO4211 preprotein translocase, SecA subunit; preprotein translocase subunit SecA 1444874..1447594 Psychromonas ingrahamii 37 4624544 YP_942592.1 CDS Ping_1156 NC_008709.1 1447668 1448048 D TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: sdn:Sden_3395 mutator MutT protein; mutator MutT protein 1447668..1448048 Psychromonas ingrahamii 37 4624545 YP_942593.1 CDS Ping_1157 NC_008709.1 1448076 1448915 R catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase complement(1448076..1448915) Psychromonas ingrahamii 37 4624546 YP_942594.1 CDS Ping_1158 NC_008709.1 1449155 1450009 R KEGG: sdn:Sden_3387 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(1449155..1450009) Psychromonas ingrahamii 37 4624547 YP_942595.1 CDS Ping_1159 NC_008709.1 1450171 1450767 D KEGG: cps:CPS_4450 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 1450171..1450767 Psychromonas ingrahamii 37 4624548 YP_942596.1 CDS Ping_1160 NC_008709.1 1450847 1451578 D PFAM: protein of unknown function DUF1342; KEGG: vfi:VF2190 hypothetical protein; hypothetical protein 1450847..1451578 Psychromonas ingrahamii 37 4624549 YP_942597.1 CDS Ping_1161 NC_008709.1 1451605 1451796 D PFAM: protein of unknown function DUF329; KEGG: ppr:PBPRA3206 zinc-binding protein; hypothetical protein 1451605..1451796 Psychromonas ingrahamii 37 4624550 YP_942598.1 CDS Ping_1163 NC_008709.1 1452467 1452793 R PFAM: translation initiation factor SUI1; KEGG: sdn:Sden_2675 translation initiation factor SUI1; translation initiation factor SUI1 complement(1452467..1452793) Psychromonas ingrahamii 37 4624552 YP_942599.1 CDS Ping_1164 NC_008709.1 1452883 1453890 R PFAM: Integrase, catalytic region; KEGG: plu:plu3016 transposase, IS30 family; integrase catalytic subunit complement(1452883..1453890) Psychromonas ingrahamii 37 4624553 YP_942600.1 CDS Ping_1165 NC_008709.1 1454465 1455583 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1454465..1455583 Psychromonas ingrahamii 37 4624554 YP_942601.1 CDS Ping_1166 NC_008709.1 1456025 1456810 D KEGG: ppr:PBPRA0761 hypothetical fimbrial biogenesis and twitching motility protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1456025..1456810 Psychromonas ingrahamii 37 4624555 YP_942602.1 CDS Ping_1167 NC_008709.1 1456803 1457930 D KEGG: sbo:SBO_2540 hypothetical protein; hypothetical protein 1456803..1457930 Psychromonas ingrahamii 37 4624556 YP_942603.1 CDS Ping_1168 NC_008709.1 1458139 1459248 D KEGG: cps:CPS_4252 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1458139..1459248 Psychromonas ingrahamii 37 4624557 YP_942604.1 CDS Ping_1169 NC_008709.1 1459726 1461072 D KEGG: son:SO3311 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1459726..1461072 Psychromonas ingrahamii 37 4624558 YP_942605.1 CDS Ping_1170 NC_008709.1 1461108 1461788 D KEGG: vpa:VP0610 hypothetical protein; hypothetical protein 1461108..1461788 Psychromonas ingrahamii 37 4624559 YP_942606.1 CDS Ping_1171 NC_008709.1 1461802 1463001 D PFAM: Pyrrolo-quinoline quinone; KEGG: vch:VC0762 hypothetical protein; Pyrrolo-quinoline quinone 1461802..1463001 Psychromonas ingrahamii 37 4624560 YP_942607.1 CDS engA NC_008709.1 1463082 1464551 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1463082..1464551 Psychromonas ingrahamii 37 4624470 YP_942608.1 CDS Ping_1173 NC_008709.1 1464551 1464781 D KEGG: vpa:VP0614 hypothetical protein; hypothetical protein 1464551..1464781 Psychromonas ingrahamii 37 4624471 YP_942609.1 CDS Ping_1174 NC_008709.1 1464865 1465434 R PFAM: transport-associated; KEGG: pha:PSHAa2525 hypothetical protein; transport-associated complement(1464865..1465434) Psychromonas ingrahamii 37 4624472 YP_942610.1 CDS Ping_1175 NC_008709.1 1465443 1466030 R TIGRFAM: phosphoheptose isomerase; KEGG: plu:plu4004 hypothetical protein; DnaA initiator-associating factor for replication initiation complement(1465443..1466030) Psychromonas ingrahamii 37 4624473 YP_942611.1 CDS Ping_1176 NC_008709.1 1466045 1466413 R PFAM: protein of unknown function UPF0102; KEGG: pfo:Pfl_4685 protein of unknown function UPF0102; hypothetical protein complement(1466045..1466413) Psychromonas ingrahamii 37 4624474 YP_942612.1 CDS Ping_1177 NC_008709.1 1466382 1468415 R PFAM: LppC family lipoprotein; KEGG: ppr:PBPRA3227 hypothetical lipoprotein; LppC family lipoprotein complement(1466382..1468415) Psychromonas ingrahamii 37 4624475 YP_942613.1 CDS Ping_1178 NC_008709.1 1468454 1469314 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: vpa:VP0450 hypothetical protein; uroporphyrin-III C/tetrapyrrole methyltransferase 1468454..1469314 Psychromonas ingrahamii 37 4624476 YP_942614.1 CDS Ping_1180 NC_008709.1 1471707 1472795 D KEGG: bth:BT2869 putative succinyltransferase involved in succinoglycan biosynthesis; hypothetical protein 1471707..1472795 Psychromonas ingrahamii 37 4624479 YP_942615.1 CDS Ping_1181 NC_008709.1 1472977 1473603 R PFAM: Resolvase, N-terminal domain; KEGG: gme:Gmet_3142 resolvase-like; resolvase domain-containing protein complement(1472977..1473603) Psychromonas ingrahamii 37 4624480 YP_942616.1 CDS Ping_1182 NC_008709.1 1474322 1474633 D PFAM: transposase IS3/IS911 family protein; KEGG: lpf:lpl1584 hypothetical protein; transposase IS3/IS911 family protein 1474322..1474633 Psychromonas ingrahamii 37 4624481 YP_942617.1 CDS Ping_1183 NC_008709.1 1474653 1475483 D PFAM: Integrase, catalytic region; KEGG: lpf:lpl1576 hypothetical protein; integrase catalytic subunit 1474653..1475483 Psychromonas ingrahamii 37 4624482 YP_942618.1 CDS Ping_1185 NC_008709.1 1476101 1476871 D PFAM: protein of unknown function DUF1555; KEGG: cps:CPS_1790 hypothetical protein; hypothetical protein 1476101..1476871 Psychromonas ingrahamii 37 4624484 YP_942619.1 CDS Ping_1186 NC_008709.1 1476991 1477275 R KEGG: plt:Plut_0869 hypothetical protein; hypothetical protein complement(1476991..1477275) Psychromonas ingrahamii 37 4624485 YP_942620.1 CDS Ping_1187 NC_008709.1 1478056 1478373 D hypothetical protein 1478056..1478373 Psychromonas ingrahamii 37 4624486 YP_942621.1 CDS Ping_1188 NC_008709.1 1479098 1479742 R KEGG: cps:CPS_1718 nicotinate-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(1479098..1479742) Psychromonas ingrahamii 37 4623585 YP_942622.1 CDS Ping_1189 NC_008709.1 1479764 1480759 R KEGG: vfi:VF0751 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta complement(1479764..1480759) Psychromonas ingrahamii 37 4623586 YP_942623.1 CDS Ping_1190 NC_008709.1 1480770 1481285 R PFAM: Rare lipoprotein B; KEGG: cps:CPS_1721 rare lipoprotein B; rare lipoprotein B complement(1480770..1481285) Psychromonas ingrahamii 37 4623587 YP_942624.1 CDS Ping_1191 NC_008709.1 1481429 1484008 R TIGRFAM: leucyl-tRNA synthetase; KEGG: vpa:VP0727 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(1481429..1484008) Psychromonas ingrahamii 37 4623588 YP_942625.1 CDS Ping_1192 NC_008709.1 1485192 1485836 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: vvy:VV1233 response regulator; LuxR family transcriptional regulator 1485192..1485836 Psychromonas ingrahamii 37 4623591 YP_942626.1 CDS Ping_1193 NC_008709.1 1485929 1487758 D KEGG: ppr:PBPRA2237 putative excinuclease ABC, subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit domain protein; helix-hairpin-helix motif; excinuclease ABC, C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding, class 1; excinuclease ABC subunit C 1485929..1487758 Psychromonas ingrahamii 37 4623592 YP_942627.1 CDS Ping_1194 NC_008709.1 1487910 1488461 D KEGG: vpa:VP1943 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1487910..1488461 Psychromonas ingrahamii 37 4623593 YP_942628.1 CDS arcA NC_008709.1 1489165 1489881 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sdy:SDY_4662 negative response regulator of genes in aerobic pathways; two-component response regulator complement(1489165..1489881) Psychromonas ingrahamii 37 4623597 YP_942629.1 CDS Ping_1197 NC_008709.1 1490984 1491223 D PFAM: Transglycosylase-associated protein; KEGG: gme:Gmet_1208 transglycosylase-associated protein; transglycosylase 1490984..1491223 Psychromonas ingrahamii 37 4623599 YP_942630.1 CDS Ping_1198 NC_008709.1 1491505 1491879 D PFAM: GGDEF domain containing protein; KEGG: mag:amb3617 hypothetical protein YddU; cyclic-di-GMP regulatory protein 1491505..1491879 Psychromonas ingrahamii 37 4623600 YP_942631.1 CDS Ping_1199 NC_008709.1 1492221 1495265 D KEGG: son:SO1500 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; 5TM Receptors of the LytS-YhcK type, transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1492221..1495265 Psychromonas ingrahamii 37 4623601 YP_942632.1 CDS Ping_1200 NC_008709.1 1495519 1497378 D KEGG: vvy:VVA0239 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1495519..1497378 Psychromonas ingrahamii 37 4623602 YP_942633.1 CDS Ping_1202 NC_008709.1 1498112 1500916 D KEGG: tdn:Tmden_1941 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; domain of unknown function DUF1745; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; bifunctional sensor protein/response regulator 1498112..1500916 Psychromonas ingrahamii 37 4623753 YP_942634.1 CDS Ping_1203 NC_008709.1 1501758 1504556 D KEGG: tdn:Tmden_1941 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; domain of unknown function DUF1745; PAS fold domain protein; SMART: PAC repeat-containing protein; sensor histidine kinase PAS domain-containing protein 1501758..1504556 Psychromonas ingrahamii 37 4623754 YP_942635.1 CDS Ping_1204 NC_008709.1 1505361 1508156 D KEGG: tdn:Tmden_1941 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; domain of unknown function DUF1745; PAS fold domain protein; SMART: PAC repeat-containing protein; sensor histidine kinase PAS domain-containing protein 1505361..1508156 Psychromonas ingrahamii 37 4623755 YP_942636.1 CDS Ping_1205 NC_008709.1 1508554 1509477 R KEGG: dar:Daro_2825 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(1508554..1509477) Psychromonas ingrahamii 37 4623756 YP_942637.1 CDS Ping_1206 NC_008709.1 1509903 1510391 R PFAM: protein of unknown function DUF523; KEGG: dps:DP2318 hypothetical protein; purine nucleoside phosphorylase complement(1509903..1510391) Psychromonas ingrahamii 37 4623757 YP_942638.1 CDS Ping_1207 NC_008709.1 1510787 1511905 R PFAM: hydrogenase formation HypD protein; KEGG: gme:Gmet_0117 hydrogenase formation HypD protein; hydrogenase formation HypD protein complement(1510787..1511905) Psychromonas ingrahamii 37 4623758 YP_942639.1 CDS Ping_1208 NC_008709.1 1511913 1512773 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rme:Rmet_1541 formyl transferase-like protein; enoyl-CoA hydratase/isomerase complement(1511913..1512773) Psychromonas ingrahamii 37 4623759 YP_942640.1 CDS Ping_1209 NC_008709.1 1512775 1513629 R PFAM: formyl transferase domain protein; KEGG: aae:aq_1156 hydrogenase regulation HoxX; formyl transferase domain-containing protein complement(1512775..1513629) Psychromonas ingrahamii 37 4623760 YP_942641.1 CDS Ping_1210 NC_008709.1 1513629 1514639 R TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cte:CT1792 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE complement(1513629..1514639) Psychromonas ingrahamii 37 4623761 YP_942642.1 CDS Ping_1211 NC_008709.1 1514677 1514931 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: sma:SAV7376 putative hydrogenase expression/formation protein; hydrogenase assembly chaperone HypC/HupF complement(1514677..1514931) Psychromonas ingrahamii 37 4623762 YP_942643.1 CDS hypB NC_008709.1 1514937 1515731 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: rfr:Rfer_4096 hydrogenase accessory protein HypB; GTP hydrolase, accessory liganding Ni into hydrogenases, HypB complement(1514937..1515731) Psychromonas ingrahamii 37 4623763 YP_942644.1 CDS Ping_1213 NC_008709.1 1515732 1516076 R TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: rme:Rmet_1535 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA complement(1515732..1516076) Psychromonas ingrahamii 37 4623764 YP_942645.1 CDS Ping_1214 NC_008709.1 1516069 1516605 R KEGG: mca:MCA0113 HoxW protein; HoxW protein complement(1516069..1516605) Psychromonas ingrahamii 37 4623765 YP_942646.1 CDS Ping_1215 NC_008709.1 1516764 1518263 R PFAM: nickel-dependent hydrogenase, large subunit; KEGG: mca:MCA0114 NAD-reducing hydrogenase, beta subunit; nickel-dependent hydrogenase, large subunit complement(1516764..1518263) Psychromonas ingrahamii 37 4623766 YP_942647.1 CDS Ping_1216 NC_008709.1 1518277 1519578 R PFAM: ferredoxin; NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mca:MCA2725 NAD-reducing hydrogenase, gamma subunit; hydrogen dehydrogenase complement(1518277..1519578) Psychromonas ingrahamii 37 4623767 YP_942648.1 CDS Ping_1217 NC_008709.1 1519587 1521353 R PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mca:MCA2724 NAD-reducing hydrogenase, alpha subunit; hydrogenase, NADP-reducing subunit C complement(1519587..1521353) Psychromonas ingrahamii 37 4623768 YP_942649.1 CDS Ping_1218 NC_008709.1 1521625 1523913 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: syn:sll0322 putative hydrogenase expression/formation protein HypF; (NiFe) hydrogenase maturation protein HypF 1521625..1523913 Psychromonas ingrahamii 37 4623769 YP_942650.1 CDS Ping_1220 NC_008709.1 1524906 1525640 D PFAM: protein of unknown function DUF1538; KEGG: vvy:VV0991 hypothetical protein; hypothetical protein 1524906..1525640 Psychromonas ingrahamii 37 4624487 YP_942651.1 CDS Ping_1221 NC_008709.1 1525637 1526431 D PFAM: protein of unknown function DUF1538; KEGG: vpa:VP0812 hypothetical protein; ABC transporter for copper permease 1525637..1526431 Psychromonas ingrahamii 37 4624488 YP_942652.1 CDS Ping_1222 NC_008709.1 1526421 1526771 D KEGG: vpa:VP0813 putative nitrogen regulatory protein P-II family protein; putative nitrogen regulatory protein P-II family protein 1526421..1526771 Psychromonas ingrahamii 37 4624489 YP_942653.1 CDS Ping_1223 NC_008709.1 1526768 1527172 D PFAM: CBS domain containing protein; KEGG: vvy:VV0994 hypothetical protein; signal-transduction protein 1526768..1527172 Psychromonas ingrahamii 37 4624490 YP_942654.1 CDS Ping_1224 NC_008709.1 1527169 1527327 R KEGG: ppr:PBPRA0869 hypothetical protein; hypothetical protein complement(1527169..1527327) Psychromonas ingrahamii 37 4624491 YP_942655.1 CDS Ping_1225 NC_008709.1 1527462 1527914 D KEGG: pol:Bpro_0409 hypothetical protein; hypothetical protein 1527462..1527914 Psychromonas ingrahamii 37 4624492 YP_942656.1 CDS Ping_1227 NC_008709.1 1528348 1528875 R PFAM: cytochrome B561; KEGG: vvu:VV20890 cytochrome b; cytochrome B561 complement(1528348..1528875) Psychromonas ingrahamii 37 4624494 YP_942657.1 CDS Ping_1228 NC_008709.1 1529371 1530027 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: vpa:VP1734 DNA-binding response regulator; winged helix family two component transcriptional regulator 1529371..1530027 Psychromonas ingrahamii 37 4624495 YP_942658.1 CDS Ping_1229 NC_008709.1 1530017 1531450 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: vpa:VP1735 putative two-component sensor; sensor histidine kinase 1530017..1531450 Psychromonas ingrahamii 37 4624496 YP_942659.1 CDS Ping_1230 NC_008709.1 1531541 1532488 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: hch:HCH_05375 permease of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 1531541..1532488 Psychromonas ingrahamii 37 4624497 YP_942660.1 CDS Ping_1231 NC_008709.1 1533369 1533968 D KEGG: hch:HCH_03651 hypothetical protein; hypothetical protein 1533369..1533968 Psychromonas ingrahamii 37 4624498 YP_942661.1 CDS Ping_1232 NC_008709.1 1533965 1535896 D KEGG: hch:HCH_03650 molecular chaperone; chaperone DnaK-like protein 1533965..1535896 Psychromonas ingrahamii 37 4624499 YP_942662.1 CDS Ping_1233 NC_008709.1 1535896 1538715 D KEGG: hch:HCH_03649 molecular chaperone; chaperone DnaK-like protein 1535896..1538715 Psychromonas ingrahamii 37 4624500 YP_942663.1 CDS Ping_1234 NC_008709.1 1539197 1539613 D PFAM: UspA domain protein; KEGG: vvy:VV0075 universal stress protein UspA; universal stress protein 1539197..1539613 Psychromonas ingrahamii 37 4624501 YP_942664.1 CDS Ping_1235 NC_008709.1 1539855 1541744 D catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 1539855..1541744 Psychromonas ingrahamii 37 4624502 YP_942665.1 CDS Ping_1236 NC_008709.1 1541970 1542767 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: vfi:VF0982 transporter, drug/metabolite exporter family; hypothetical protein 1541970..1542767 Psychromonas ingrahamii 37 4624503 YP_942666.1 CDS Ping_1237 NC_008709.1 1543680 1544540 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dps:DP2113 hypothetical protein; metal dependent phosphohydrolase 1543680..1544540 Psychromonas ingrahamii 37 4624504 YP_942667.1 CDS Ping_1238 NC_008709.1 1544631 1545725 D KEGG: sme:SMc00991 putative putrescine-binding periplasmic protein; spermidine/putrescine-binding periplasmic protein-like protein 1544631..1545725 Psychromonas ingrahamii 37 4624505 YP_942668.1 CDS Ping_1239 NC_008709.1 1545733 1548165 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: pat:Patl_2665 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 1545733..1548165 Psychromonas ingrahamii 37 4624996 YP_942669.1 CDS Ping_1240 NC_008709.1 1548392 1550224 D PFAM: Citrate transporter; TrkA-C domain protein; KEGG: cps:CPS_3372 putative transporter; citrate transporter 1548392..1550224 Psychromonas ingrahamii 37 4624997 YP_942670.1 CDS Ping_1241 NC_008709.1 1550530 1550820 R hypothetical protein complement(1550530..1550820) Psychromonas ingrahamii 37 4624998 YP_942671.1 CDS Ping_1242 NC_008709.1 1551164 1551784 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sdn:Sden_3478 (acyl-carrier protein) phosphodiesterase; ACP phosphodiesterase 1551164..1551784 Psychromonas ingrahamii 37 4624999 YP_942672.1 CDS Ping_1243 NC_008709.1 1551925 1552404 R PFAM: protein of unknown function DUF336; KEGG: ppr:PBPRB1633 hypothetical protein; hypothetical protein complement(1551925..1552404) Psychromonas ingrahamii 37 4625000 YP_942673.1 CDS Ping_1244 NC_008709.1 1552401 1553441 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: vvy:VVA1350 predicted dehydrogenase; oxidoreductase domain-containing protein complement(1552401..1553441) Psychromonas ingrahamii 37 4625001 YP_942674.1 CDS Ping_1245 NC_008709.1 1554793 1556211 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: bba:Bd1513 regulator protein PilR; Fis family two component sigma-54 specific transcriptional regulator protein 1554793..1556211 Psychromonas ingrahamii 37 4625002 YP_942675.1 CDS Ping_1246 NC_008709.1 1556225 1556758 D KEGG: mxa:MXAN_2774 heat shock protein, HSP20 family; heat shock protein, HSP20 family protein 1556225..1556758 Psychromonas ingrahamii 37 4625003 YP_942676.1 CDS Ping_1247 NC_008709.1 1556826 1559024 D KEGG: mxa:MXAN_2773 ATPase, AAA family; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; cell division protein CDC48 1556826..1559024 Psychromonas ingrahamii 37 4625004 YP_942677.1 CDS Ping_1248 NC_008709.1 1559014 1559826 D PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: mxa:MXAN_2772 gas vesicle protein, GvpL/GvpF family; gas vesicle synthesis GvpLGvpF 1559014..1559826 Psychromonas ingrahamii 37 4625005 YP_942678.1 CDS Ping_1249 NC_008709.1 1559823 1560578 D PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: mxa:MXAN_2771 gas vesicle protein, GvpL/GvpF family; gas vesicle synthesis GvpLGvpF 1559823..1560578 Psychromonas ingrahamii 37 4625006 YP_942679.1 CDS Ping_1250 NC_008709.1 1560575 1562095 D KEGG: mxa:MXAN_6865 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; sensor histidine kinase PAS domain-containing protein 1560575..1562095 Psychromonas ingrahamii 37 4625007 YP_942680.1 CDS Ping_1251 NC_008709.1 1562092 1562484 D PFAM: response regulator receiver; KEGG: det:DET1294 DNA-binding response regulator; CheY-like chemotaxis protein, response regulator receiver 1562092..1562484 Psychromonas ingrahamii 37 4625008 YP_942681.1 CDS Ping_1253 NC_008709.1 1564127 1564345 D involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins; gas vesicle synthesis protein GvpA 1564127..1564345 Psychromonas ingrahamii 37 4624744 YP_942682.1 CDS Ping_1254 NC_008709.1 1564522 1565781 D KEGG: tcr:504239.220 mucin-associated surface protein (MASP) Pfam: Vicilin_N PROSITE: ALA_RICH CHEMOTAXIS_TRANSDUC_2; hypothetical protein 1564522..1565781 Psychromonas ingrahamii 37 4624745 YP_942683.1 CDS Ping_1255 NC_008709.1 1565893 1566897 D KEGG: cya:CYA_0826 gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; gas vesicle protein GvpN 1565893..1566897 Psychromonas ingrahamii 37 4624746 YP_942684.1 CDS Ping_1256 NC_008709.1 1566934 1567245 D hypothetical protein 1566934..1567245 Psychromonas ingrahamii 37 4624747 YP_942685.1 CDS Ping_1257 NC_008709.1 1567335 1567547 D hypothetical protein 1567335..1567547 Psychromonas ingrahamii 37 4624748 YP_942686.1 CDS Ping_1258 NC_008709.1 1567620 1568426 D PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: mxa:MXAN_2769 gas vesicle protein, GvpL/GvpF family; gas vesicle synthesis GvpLGvpF 1567620..1568426 Psychromonas ingrahamii 37 4624749 YP_942687.1 CDS Ping_1259 NC_008709.1 1568433 1568882 D KEGG: pfa:PF14_0480 hypothetical protein; gas vesicle protein G 1568433..1568882 Psychromonas ingrahamii 37 4624750 YP_942688.1 CDS Ping_1260 NC_008709.1 1568957 1569181 D PFAM: gas vesicle protein GVPa; KEGG: plt:Plut_0704 hypothetical protein; gas vesicle protein GvpA 1568957..1569181 Psychromonas ingrahamii 37 4624751 YP_942689.1 CDS Ping_1261 NC_008709.1 1569183 1569515 D PFAM: Gas vesicle K; KEGG: mxa:MXAN_2766 putative gas vesicle protein GvpK; gas vesicle protein K 1569183..1569515 Psychromonas ingrahamii 37 4624752 YP_942690.1 CDS Ping_1262 NC_008709.1 1569529 1569834 D PFAM: gas vesicle protein GVPa; KEGG: mxa:MXAN_2765 gas vesicle protein, GvpA family; gas vesicle protein GvpA 1569529..1569834 Psychromonas ingrahamii 37 4624753 YP_942691.1 CDS Ping_1263 NC_008709.1 1570478 1571020 D KEGG: mba:Mbar_A0341 hypothetical protein; hypothetical protein 1570478..1571020 Psychromonas ingrahamii 37 4624754 YP_942692.1 CDS Ping_1264 NC_008709.1 1571949 1572524 D PFAM: stress protein; KEGG: sco:SCO0641 tellurium resistance protein; stress protein, tellurium resistance protein 1571949..1572524 Psychromonas ingrahamii 37 4624755 YP_942693.1 CDS Ping_1265 NC_008709.1 1572610 1573215 D PFAM: stress protein; KEGG: aci:ACIAD1952 tellurium resistance protein; stress protein, tellurium resistance protein TerZ 1572610..1573215 Psychromonas ingrahamii 37 4624756 YP_942694.1 CDS Ping_1266 NC_008709.1 1573363 1573941 D PFAM: stress protein; KEGG: ecs:ECs1355 putative tellurium resistance protein TerD; stress protein, tellurium resistance protein 1573363..1573941 Psychromonas ingrahamii 37 4624757 YP_942695.1 CDS Ping_1267 NC_008709.1 1573991 1575082 D PFAM: sodium/calcium exchanger membrane region; KEGG: rba:RB8016 probable sodium/calcium exchanger antiporter; sodium/calcium exchanger membrane region 1573991..1575082 Psychromonas ingrahamii 37 4624758 YP_942696.1 CDS Ping_1268 NC_008709.1 1575368 1576450 D KEGG: noc:Noc_1003 hypothetical protein; hypothetical protein 1575368..1576450 Psychromonas ingrahamii 37 4624759 YP_942697.1 CDS Ping_1269 NC_008709.1 1576451 1577212 D PFAM: sucrose-6F-phosphate phosphohydrolase; KEGG: noc:Noc_1004 hypothetical protein; sucrose-6F-phosphate phosphohydrolase 1576451..1577212 Psychromonas ingrahamii 37 4624760 YP_942698.1 CDS Ping_1270 NC_008709.1 1577205 1578314 D KEGG: noc:Noc_1005 hypothetical protein; hypothetical protein 1577205..1578314 Psychromonas ingrahamii 37 4624761 YP_942699.1 CDS Ping_1271 NC_008709.1 1578343 1578951 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: cac:CAC2227 phosphoserine phosphatase family enzyme; HAD family hydrolase 1578343..1578951 Psychromonas ingrahamii 37 4624762 YP_942700.1 CDS Ping_1272 NC_008709.1 1579154 1579609 D PFAM: Tellurite resistance TerB; KEGG: rha:RHA1_ro01775 tellurium resistance protein; tellurite resistance TerB 1579154..1579609 Psychromonas ingrahamii 37 4626977 YP_942701.1 CDS thrA NC_008709.1 1580888 1583350 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 1580888..1583350 Psychromonas ingrahamii 37 4626980 YP_942702.1 CDS Ping_1276 NC_008709.1 1583352 1584308 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1583352..1584308 Psychromonas ingrahamii 37 4626981 YP_942703.1 CDS Ping_1277 NC_008709.1 1584305 1585582 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1584305..1585582 Psychromonas ingrahamii 37 4626982 YP_942704.1 CDS Ping_1278 NC_008709.1 1585657 1586526 D KEGG: yps:YPTB0975 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 1585657..1586526 Psychromonas ingrahamii 37 4626983 YP_942705.1 CDS Ping_1279 NC_008709.1 1586622 1586867 R hypothetical protein complement(1586622..1586867) Psychromonas ingrahamii 37 4626984 YP_942706.1 CDS Ping_1280 NC_008709.1 1587453 1587977 D hypothetical protein 1587453..1587977 Psychromonas ingrahamii 37 4626758 YP_942707.1 CDS Ping_1281 NC_008709.1 1588287 1588664 R stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA complement(1588287..1588664) Psychromonas ingrahamii 37 4626759 YP_942708.1 CDS Ping_1282 NC_008709.1 1588893 1589057 R KEGG: pmu:PM0064 hypothetical HI0017; hypothetical protein complement(1588893..1589057) Psychromonas ingrahamii 37 4626760 YP_942709.1 CDS Ping_1283 NC_008709.1 1589341 1589991 D TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: vfi:VF2113 uracil-DNA glycosylase; uracil-DNA glycosylase 1589341..1589991 Psychromonas ingrahamii 37 4626761 YP_942710.1 CDS Ping_1284 NC_008709.1 1590071 1590610 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: vpa:VP0501 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 1590071..1590610 Psychromonas ingrahamii 37 4626762 YP_942711.1 CDS Ping_1285 NC_008709.1 1591362 1591799 R PFAM: Holliday junction resolvase YqgF; SMART: Resolvase, RNase H domain protein fold; KEGG: sdn:Sden_2673 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF complement(1591362..1591799) Psychromonas ingrahamii 37 4626763 YP_942712.1 CDS Ping_1286 NC_008709.1 1591880 1592473 R PFAM: protein of unknown function DUF179; KEGG: vch:VC0467 putative transcriptional regulator; hypothetical protein complement(1591880..1592473) Psychromonas ingrahamii 37 4626764 YP_942713.1 CDS Ping_1287 NC_008709.1 1592526 1593482 R KEGG: sdn:Sden_2975 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase complement(1592526..1593482) Psychromonas ingrahamii 37 4626765 YP_942714.1 CDS Ping_1288 NC_008709.1 1593516 1594244 R PFAM: protein of unknown function DUF558; KEGG: vfi:VF0436 hypothetical protein; hypothetical protein complement(1593516..1594244) Psychromonas ingrahamii 37 4625306 YP_942715.1 CDS Ping_1289 NC_008709.1 1594984 1595940 D KEGG: cps:CPS_0276 hypothetical protein; hypothetical protein 1594984..1595940 Psychromonas ingrahamii 37 4625307 YP_942716.1 CDS Ping_1290 NC_008709.1 1596025 1596801 D PFAM: protein of unknown function DUF1212; KEGG: ppr:PBPRA0398 hypothetical protein; hypothetical protein 1596025..1596801 Psychromonas ingrahamii 37 4625308 YP_942717.1 CDS Ping_1291 NC_008709.1 1596848 1597312 D KEGG: vvy:VV0474 hypothetical protein; hypothetical protein 1596848..1597312 Psychromonas ingrahamii 37 4625309 YP_942718.1 CDS Ping_1292 NC_008709.1 1597549 1597884 D PFAM: SEC-C motif domain protein; KEGG: ppr:PBPRA1441 hypothetical protein; SecC motif-containing protein 1597549..1597884 Psychromonas ingrahamii 37 4625310 YP_942719.1 CDS Ping_1293 NC_008709.1 1597928 1598224 D PFAM: protein of unknown function DUF1244; KEGG: cps:CPS_2137 hypothetical protein; hypothetical protein 1597928..1598224 Psychromonas ingrahamii 37 4625311 YP_942720.1 CDS Ping_1294 NC_008709.1 1598277 1599080 R KEGG: pha:PSHAb0262 putative orphan protein; hypothetical protein complement(1598277..1599080) Psychromonas ingrahamii 37 4625312 YP_942721.1 CDS Ping_1295 NC_008709.1 1599338 1601092 D PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRA1539 putative ATP-dependent helicase; type III restriction enzyme, res subunit 1599338..1601092 Psychromonas ingrahamii 37 4625313 YP_942722.1 CDS Ping_1296 NC_008709.1 1601190 1602470 R KEGG: pat:Patl_2932 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase complement(1601190..1602470) Psychromonas ingrahamii 37 4625314 YP_942723.1 CDS Ping_1297 NC_008709.1 1603701 1604705 D PFAM: basic membrane lipoprotein; KEGG: hch:HCH_02309 uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; basic membrane lipoprotein 1603701..1604705 Psychromonas ingrahamii 37 4625315 YP_942724.1 CDS Ping_1298 NC_008709.1 1604873 1606444 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH00188 probable sugar ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 1604873..1606444 Psychromonas ingrahamii 37 4625316 YP_942725.1 CDS Ping_1299 NC_008709.1 1606441 1607574 D PFAM: inner-membrane translocator; KEGG: hch:HCH_02311 ABC-type uncharacterized transport system, permease component; ABC transporter inner-membrane translocator 1606441..1607574 Psychromonas ingrahamii 37 4625317 YP_942726.1 CDS Ping_1300 NC_008709.1 1607578 1608543 D PFAM: inner-membrane translocator; KEGG: mes:Meso_3654 inner-membrane translocator; ABC sugar transporter inner membrane translocator 1607578..1608543 Psychromonas ingrahamii 37 4625318 YP_942727.1 CDS Ping_1301 NC_008709.1 1608830 1611076 D PFAM: peptidase U32; KEGG: ppr:PBPRA1758 putative collagenase family protease; peptidase U32 1608830..1611076 Psychromonas ingrahamii 37 4625319 YP_942728.1 CDS Ping_1302 NC_008709.1 1613212 1614438 D with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease subunit SbcD 1613212..1614438 Psychromonas ingrahamii 37 4625834 YP_942729.1 CDS Ping_1303 NC_008709.1 1614435 1618139 D PFAM: SMC domain protein; KEGG: yps:YPTB0915 putative ATP-dependent dsDNA exonuclease; SMC domain-containing protein 1614435..1618139 Psychromonas ingrahamii 37 4625835 YP_942730.1 CDS Ping_1305 NC_008709.1 1619911 1620342 D KEGG: xac:XAC3767 hypothetical protein; hypothetical protein 1619911..1620342 Psychromonas ingrahamii 37 4625837 YP_942731.1 CDS Ping_1306 NC_008709.1 1620691 1622289 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A3335 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains); diguanylate cyclase complement(1620691..1622289) Psychromonas ingrahamii 37 4625838 YP_942732.1 CDS Ping_1307 NC_008709.1 1623139 1624194 R KEGG: lic:LIC10483 hypothetical protein; antifreeze protein type I complement(1623139..1624194) Psychromonas ingrahamii 37 4625839 YP_942733.1 CDS Ping_1308 NC_008709.1 1624357 1626042 R KEGG: mxa:MXAN_3756 hypothetical protein; hypothetical protein complement(1624357..1626042) Psychromonas ingrahamii 37 4625840 YP_942734.1 CDS Ping_1309 NC_008709.1 1626485 1627525 R KEGG: vpa:VP2016 hypothetical protein; diheme-containing SoxA-like protein complement(1626485..1627525) Psychromonas ingrahamii 37 4625841 YP_942735.1 CDS Ping_1310 NC_008709.1 1627536 1628168 R KEGG: vpa:VP2015 putative cytochrome c; diheme-containing protein c4 complement(1627536..1628168) Psychromonas ingrahamii 37 4625842 YP_942736.1 CDS Ping_1312 NC_008709.1 1629544 1630617 D KEGG: ret:RHE_PC00149 putative sugar ABC transporter, substrate-binding protein; ABC transporter substrate-binding protein or LacI-type transcriptional regulator 1629544..1630617 Psychromonas ingrahamii 37 4625844 YP_942737.1 CDS Ping_1313 NC_008709.1 1630651 1632282 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: mag:amb3451 response regulator containing a CheY-like receiver domain and a GGDEF domain; diguanylate cyclase 1630651..1632282 Psychromonas ingrahamii 37 4625845 YP_942738.1 CDS Ping_1314 NC_008709.1 1632678 1633199 R PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY3675 hypothetical protein; N-acetyltransferase GCN5 complement(1632678..1633199) Psychromonas ingrahamii 37 4625846 YP_942739.1 CDS Ping_1315 NC_008709.1 1633996 1635558 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: ppr:PBPRA1185 putative sulfate permease family protein; sulfate transporter 1633996..1635558 Psychromonas ingrahamii 37 4625847 YP_942740.1 CDS Ping_1316 NC_008709.1 1636478 1637440 D KEGG: ppr:PBPRA0234 putative 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 1636478..1637440 Psychromonas ingrahamii 37 4625848 YP_942741.1 CDS Ping_1317 NC_008709.1 1637596 1638183 D TIGRFAM: yecA family protein; yecA family protein 1637596..1638183 Psychromonas ingrahamii 37 4625849 YP_942742.1 CDS Ping_1318 NC_008709.1 1638176 1638904 D TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: vfi:VF1020 tRNA pseudouridine synthase A; pseudouridine synthase Rlu family protein 1638176..1638904 Psychromonas ingrahamii 37 4626431 YP_942743.1 CDS Ping_1319 NC_008709.1 1639134 1639943 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pat:Patl_2648 exodeoxyribonuclease III; exodeoxyribonuclease III complement(1639134..1639943) Psychromonas ingrahamii 37 4626432 YP_942744.1 CDS Ping_1320 NC_008709.1 1640037 1640273 R KEGG: pha:PSHAb0336 hypothetical protein; hypothetical protein complement(1640037..1640273) Psychromonas ingrahamii 37 4626433 YP_942745.1 CDS Ping_1321 NC_008709.1 1640634 1641422 R PFAM: inositol monophosphatase; KEGG: sbo:SBO_2557 SuhB; inositol-phosphate phosphatase complement(1640634..1641422) Psychromonas ingrahamii 37 4626434 YP_942746.1 CDS Ping_1322 NC_008709.1 1641670 1642434 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: vfi:VF0615 RRNA methylase, SpoU family; RNA methyltransferase 1641670..1642434 Psychromonas ingrahamii 37 4626435 YP_942747.1 CDS Ping_1323 NC_008709.1 1642580 1643056 D TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: vfi:VF0616 Rrf2 family protein; BadM/Rrf2 family transcriptional regulator 1642580..1643056 Psychromonas ingrahamii 37 4626436 YP_942748.1 CDS Ping_1324 NC_008709.1 1643086 1644297 D TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sdy:SDY_2726 putative aminotransferase; cysteine desulfurase IscS 1643086..1644297 Psychromonas ingrahamii 37 4626437 YP_942749.1 CDS Ping_1325 NC_008709.1 1644428 1644814 D TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: son:SO2265 NifU family protein; scaffold protein 1644428..1644814 Psychromonas ingrahamii 37 4626438 YP_942750.1 CDS Ping_1326 NC_008709.1 1644900 1645211 D TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: eca:ECA3235 iron-sulfur cluster assembly protein; iron-sulfur cluster assembly protein IscA 1644900..1645211 Psychromonas ingrahamii 37 4626439 YP_942751.1 CDS Ping_1327 NC_008709.1 1645308 1645817 D TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSCB oligomerisation domain protein; KEGG: yps:YPTB2856 chaperone protein HscB; co-chaperone Hsc20 1645308..1645817 Psychromonas ingrahamii 37 4626440 YP_942752.1 CDS Ping_1328 NC_008709.1 1646078 1647949 D TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70; KEGG: ece:Z3793 heat shock protein, chaperone, member of Hsp70 protein family; Fe-S protein assembly chaperone HscA 1646078..1647949 Psychromonas ingrahamii 37 4626441 YP_942753.1 CDS Ping_1329 NC_008709.1 1647990 1648328 D TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: ppr:PBPRA0755 putative ferredoxin; ferredoxin, 2Fe-2S type, ISC system 1647990..1648328 Psychromonas ingrahamii 37 4626442 YP_942754.1 CDS Ping_1330 NC_008709.1 1648373 1648570 D PFAM: protein of unknown function DUF528; KEGG: sdn:Sden_0277 protein of unknown function DUF528; hypothetical protein 1648373..1648570 Psychromonas ingrahamii 37 4626443 YP_942755.1 CDS Ping_1331 NC_008709.1 1648675 1649967 D catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 1648675..1649967 Psychromonas ingrahamii 37 4626444 YP_942756.1 CDS Ping_1332 NC_008709.1 1650089 1650988 D PFAM: ROK family protein; KEGG: vch:VC0270 ROK family protein; ROK family protein 1650089..1650988 Psychromonas ingrahamii 37 4626445 YP_942757.1 CDS Ping_1333 NC_008709.1 1651402 1652040 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vvy:VV1593 putative threonine efflux protein; lysine exporter protein LysE/YggA complement(1651402..1652040) Psychromonas ingrahamii 37 4626446 YP_942758.1 CDS Ping_1334 NC_008709.1 1652413 1654650 D PFAM: Patatin; KEGG: cps:CPS_3628 patatin-like phospholipase family protein; patatin-like protein of phospholipase family protein 1652413..1654650 Psychromonas ingrahamii 37 4626447 YP_942759.1 CDS Ping_1335 NC_008709.1 1655002 1655577 D TIGRFAM: phosphoheptose isomerase; KEGG: vch:VC2230 phosphoheptose isomerase; phosphoheptose isomerase 1655002..1655577 Psychromonas ingrahamii 37 4626448 YP_942760.1 CDS Ping_1336 NC_008709.1 1655677 1656444 D PFAM: glutamine amidotransferase, class-II; KEGG: vfi:VF1930 glutamine amidotransferases class-II; glutamine amidotransferase, class-II 1655677..1656444 Psychromonas ingrahamii 37 4626449 YP_942761.1 CDS Ping_1337 NC_008709.1 1656569 1657678 D KEGG: tcx:Tcr_1705 heat; heat shock protein 1656569..1657678 Psychromonas ingrahamii 37 4624506 YP_942762.1 CDS Ping_1338 NC_008709.1 1658439 1659776 D PFAM: sodium:dicarboxylate symporter; KEGG: ppr:PBPRA1167 putative proton/glutamate symporter; proton/glutamate symporter 1658439..1659776 Psychromonas ingrahamii 37 4624507 YP_942763.1 CDS Ping_1339 NC_008709.1 1659881 1660273 R PFAM: regulatory protein, MerR; KEGG: psb:Psyr_0653 regulatory protein, MerR; MerR family transcriptional regulator complement(1659881..1660273) Psychromonas ingrahamii 37 4624508 YP_942764.1 CDS Ping_1340 NC_008709.1 1660393 1662783 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rme:Rmet_3524 heavy metal translocating P-type ATPase; copper-translocating P-type ATPase complement(1660393..1662783) Psychromonas ingrahamii 37 4624509 YP_942765.1 CDS Ping_1341 NC_008709.1 1663587 1663802 D hypothetical protein 1663587..1663802 Psychromonas ingrahamii 37 4624510 YP_942766.1 CDS Ping_1342 NC_008709.1 1663980 1665059 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1663980..1665059 Psychromonas ingrahamii 37 4624511 YP_942767.1 CDS Ping_1344 NC_008709.1 1665893 1666489 R KEGG: ppr:PBPRB1782 putative transposase; putative transposase complement(1665893..1666489) Psychromonas ingrahamii 37 4624513 YP_942768.1 CDS Ping_1345 NC_008709.1 1666440 1666925 R KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative complement(1666440..1666925) Psychromonas ingrahamii 37 4624514 YP_942769.1 CDS Ping_1346 NC_008709.1 1666961 1667170 R KEGG: abo:ABO_1375 hypothetical protein; hypothetical protein complement(1666961..1667170) Psychromonas ingrahamii 37 4624515 YP_942770.1 CDS Ping_1347 NC_008709.1 1667516 1668085 R KEGG: sdn:Sden_3558 hypothetical protein; hypothetical protein complement(1667516..1668085) Psychromonas ingrahamii 37 4624516 YP_942771.1 CDS Ping_1348 NC_008709.1 1668095 1668793 R KEGG: cps:CPS_4862 hypothetical protein; hypothetical protein complement(1668095..1668793) Psychromonas ingrahamii 37 4624517 YP_942772.1 CDS Ping_1349 NC_008709.1 1668846 1669202 R hypothetical protein complement(1668846..1669202) Psychromonas ingrahamii 37 4624518 YP_942773.1 CDS Ping_1350 NC_008709.1 1669332 1670114 R PFAM: peptidase M56, BlaR1; KEGG: noc:Noc_0291 hypothetical protein; peptidase M56, BlaR1 complement(1669332..1670114) Psychromonas ingrahamii 37 4624519 YP_942774.1 CDS Ping_1351 NC_008709.1 1670293 1670679 R PFAM: Penicillinase repressor; KEGG: noc:Noc_0290 penicillinase repressor; transcriptional repressor, CopY family protein complement(1670293..1670679) Psychromonas ingrahamii 37 4624520 YP_942775.1 CDS Ping_1353 NC_008709.1 1671471 1671836 R TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: mfa:Mfla_0577 Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG complement(1671471..1671836) Psychromonas ingrahamii 37 4624522 YP_942776.1 CDS Ping_1354 NC_008709.1 1671846 1672115 R PFAM: multiple resistance and pH regulation protein F; KEGG: cps:CPS_3814 monovalent cation/proton antiporter, MnhF/PhaF family subunit; monovalent cation/proton antiporter, pH regulation subunit F complement(1671846..1672115) Psychromonas ingrahamii 37 4624047 YP_942777.1 CDS Ping_1355 NC_008709.1 1672109 1672609 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E complement(1672109..1672609) Psychromonas ingrahamii 37 4624048 YP_942778.1 CDS mnhE NC_008709.1 1672609 1672851 R KEGG: hch:HCH_00801 multisubunit Na+/H+ antiporter, MnhE subunit; monovalent cation/proton antiporter subunit of MnhE/PhaE family protein complement(1672609..1672851) Psychromonas ingrahamii 37 4624049 YP_942779.1 CDS Ping_1357 NC_008709.1 1672851 1674362 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D complement(1672851..1674362) Psychromonas ingrahamii 37 4624050 YP_942780.1 CDS Ping_1358 NC_008709.1 1674362 1674715 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C complement(1674362..1674715) Psychromonas ingrahamii 37 4624051 YP_942781.1 CDS Ping_1359 NC_008709.1 1674715 1677510 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A complement(1674715..1677510) Psychromonas ingrahamii 37 4624052 YP_942782.1 CDS Ping_1360 NC_008709.1 1677939 1678424 D KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative 1677939..1678424 Psychromonas ingrahamii 37 4624053 YP_942783.1 CDS Ping_1361 NC_008709.1 1678375 1678971 D KEGG: ppr:PBPRB1782 putative transposase; putative transposase 1678375..1678971 Psychromonas ingrahamii 37 4624054 YP_942784.1 CDS Ping_1362 NC_008709.1 1679171 1679791 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pae:PA4803 hypothetical protein; type 12 methyltransferase 1679171..1679791 Psychromonas ingrahamii 37 4624055 YP_942785.1 CDS Ping_1365 NC_008709.1 1682001 1682417 D KEGG: pca:Pcar_1353 hypothetical protein; hypothetical protein 1682001..1682417 Psychromonas ingrahamii 37 4624058 YP_942786.1 CDS Ping_1366 NC_008709.1 1682538 1683500 D TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: sit:TM1040_3171 K+-dependent Na+/Ca+ exchanger related-protein; Na+/Ca+ antiporter, CaCA family protein 1682538..1683500 Psychromonas ingrahamii 37 4624059 YP_942787.1 CDS Ping_1367 NC_008709.1 1683549 1684088 D KEGG: sde:Sde_0566 hypothetical protein; hypothetical protein 1683549..1684088 Psychromonas ingrahamii 37 4624060 YP_942788.1 CDS Ping_1368 NC_008709.1 1684901 1686214 D KEGG: vfi:VFA0443 copper/silver resistance outer membrane protein; copper/silver resistance outer membrane protein 1684901..1686214 Psychromonas ingrahamii 37 4624061 YP_942789.1 CDS Ping_1369 NC_008709.1 1686227 1687693 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ppr:PBPRA1004 putative cation efflux system transmembrane protein; RND family efflux transporter MFP subunit 1686227..1687693 Psychromonas ingrahamii 37 4624062 YP_942790.1 CDS Ping_1370 NC_008709.1 1687690 1690818 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ppr:PBPRA1003 putative cation efflux system transmembrane protein; CzcA family heavy metal efflux pump 1687690..1690818 Psychromonas ingrahamii 37 4624063 YP_942791.1 CDS Ping_1371 NC_008709.1 1690908 1691636 D KEGG: copA; copper resistance protein A; hypothetical protein 1690908..1691636 Psychromonas ingrahamii 37 4624064 YP_942792.1 CDS Ping_1373 NC_008709.1 1692154 1693233 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ppr:PBPRA2177 hypothetical protein; sensor histidine kinase complement(1692154..1693233) Psychromonas ingrahamii 37 4623914 YP_942793.1 CDS Ping_1374 NC_008709.1 1693230 1693544 R KEGG: ppr:PBPRA2177 hypothetical protein; hypothetical protein complement(1693230..1693544) Psychromonas ingrahamii 37 4623915 YP_942794.1 CDS Ping_1375 NC_008709.1 1693537 1694247 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ppr:PBPRA2178 hypothetical DNA-binding response regulator OmpR; winged helix family two component transcriptional regulator complement(1693537..1694247) Psychromonas ingrahamii 37 4623916 YP_942795.1 CDS Ping_1376 NC_008709.1 1694688 1695245 D PFAM: protein of unknown function, Spy-related; KEGG: vpa:VP2857 putative periplasmic protein CpxP; envelope stress induced periplasmic protein 1694688..1695245 Psychromonas ingrahamii 37 4623917 YP_942796.1 CDS Ping_1377 NC_008709.1 1695619 1695993 D KEGG: vpa:VPA1614 putative membrane protein, suppressor for copper-sensitivity A; putative membrane protein, suppressor for copper-sensitivity A 1695619..1695993 Psychromonas ingrahamii 37 4623918 YP_942797.1 CDS Ping_1378 NC_008709.1 1698298 1698825 D PFAM: Redoxin domain protein; KEGG: ppr:PBPRB1492 hypothetical thioredoxin; thioredoxin family protein 1698298..1698825 Psychromonas ingrahamii 37 4623919 YP_942798.1 CDS Ping_1379 NC_008709.1 1698924 1699652 D PFAM: DSBA oxidoreductase; KEGG: ppr:PBPRA2149 hypothetical outer membrane protein; thiol:disulfide interchange protein DsbA 1698924..1699652 Psychromonas ingrahamii 37 4623920 YP_942799.1 CDS Ping_1380 NC_008709.1 1700164 1700433 D KEGG: cps:CPS_0522 hypothetical protein; hypothetical protein 1700164..1700433 Psychromonas ingrahamii 37 4623921 YP_942800.1 CDS Ping_1381 NC_008709.1 1700616 1703150 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ilo:IL1218 cation transport ATPase; copper-translocating P-type ATPase 1700616..1703150 Psychromonas ingrahamii 37 4623922 YP_942801.1 CDS Ping_1382 NC_008709.1 1703160 1703528 D KEGG: pat:Patl_2092 hypothetical protein; protease 1703160..1703528 Psychromonas ingrahamii 37 4623923 YP_942802.1 CDS Ping_1383 NC_008709.1 1703535 1703813 D KEGG: sde:Sde_1936 hypothetical protein; hypothetical protein 1703535..1703813 Psychromonas ingrahamii 37 4623924 YP_942803.1 CDS Ping_1384 NC_008709.1 1703865 1704233 D KEGG: sde:Sde_1940 hypothetical protein; hypothetical protein 1703865..1704233 Psychromonas ingrahamii 37 4623925 YP_942804.1 CDS Ping_1385 NC_008709.1 1704246 1704707 D PFAM: regulatory protein, MerR; KEGG: pfl:PFL_0709 Cu(I)-responsive transcriptional regulator; MerR family transcriptional regulator 1704246..1704707 Psychromonas ingrahamii 37 4623926 YP_942805.1 CDS Ping_1387 NC_008709.1 1705888 1706289 R PFAM: cytochrome c, class I; KEGG: sit:TM1040_1744 cytochrome c, class I; cytochrome c, class I complement(1705888..1706289) Psychromonas ingrahamii 37 4623928 YP_942806.1 CDS Ping_1388 NC_008709.1 1707056 1707454 D PFAM: copper resistance protein CopC; KEGG: pha:PSHAb0009 putative copper resistance (CopC-like); copper resistance protein CopC 1707056..1707454 Psychromonas ingrahamii 37 4623929 YP_942807.1 CDS Ping_1389 NC_008709.1 1707469 1708359 D PFAM: copper resistance D domain protein; KEGG: sdn:Sden_3543 copper resistance D; copper resistance D domain-containing protein 1707469..1708359 Psychromonas ingrahamii 37 4623930 YP_942808.1 CDS Ping_1391 NC_008709.1 1708706 1709302 R PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: sal:Sala_3099 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like protein complement(1708706..1709302) Psychromonas ingrahamii 37 4623932 YP_942809.1 CDS Ping_1392 NC_008709.1 1709345 1710736 R PFAM: nucleoside recognition domain protein; KEGG: son:SO1245 hypothetical protein; nucleoside recognition domain-containing protein complement(1709345..1710736) Psychromonas ingrahamii 37 4623807 YP_942810.1 CDS Ping_1393 NC_008709.1 1711236 1712210 R TIGRFAM: integron integrase; PFAM: phage integrase family protein; KEGG: vch:VCA0291 site-specific recombinase IntI4; integron integrase complement(1711236..1712210) Psychromonas ingrahamii 37 4623808 YP_942811.1 CDS Ping_1394 NC_008709.1 1712530 1713096 D hypothetical protein 1712530..1713096 Psychromonas ingrahamii 37 4623809 YP_942812.1 CDS Ping_1395 NC_008709.1 1713319 1714851 D KEGG: pca:Pcar_0534 transposase IS4 family; transposase IS4 family protein 1713319..1714851 Psychromonas ingrahamii 37 4623810 YP_942813.1 CDS Ping_1396 NC_008709.1 1715200 1715520 D hypothetical protein 1715200..1715520 Psychromonas ingrahamii 37 4623811 YP_942814.1 CDS Ping_1397 NC_008709.1 1717002 1718258 D TIGRFAM: CRISPR-associated protein, Csy1 family; KEGG: lpf:lpl2839 hypothetical protein; CRISPR-associated Csy1 family protein 1717002..1718258 Psychromonas ingrahamii 37 4623812 YP_942815.1 CDS Ping_1398 NC_008709.1 1718255 1719211 D TIGRFAM: CRISPR-associated protein, Csy2 family; KEGG: lpf:plpl0049 hypothetical protein; CRISPR-associated Csy2 family protein 1718255..1719211 Psychromonas ingrahamii 37 4623813 YP_942816.1 CDS Ping_1399 NC_008709.1 1719241 1720266 D TIGRFAM: CRISPR-associated protein, Csy3 family; KEGG: lpf:lpl2841 hypothetical protein; CRISPR-associated Csy3 family protein 1719241..1720266 Psychromonas ingrahamii 37 4623814 YP_942817.1 CDS Ping_1400 NC_008709.1 1720291 1720872 D TIGRFAM: CRISPR-associated protein, Csy4 family; KEGG: plu:plu1796 hypothetical protein; CRISPR-associated Csy4 family protein 1720291..1720872 Psychromonas ingrahamii 37 4623815 YP_942818.1 CDS Ping_1402 NC_008709.1 1721911 1722525 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ppr:PBPRB0628 hypothetical fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase 1721911..1722525 Psychromonas ingrahamii 37 4623817 YP_942819.1 CDS Ping_1403 NC_008709.1 1722728 1723744 D KEGG: cps:CPS_2996 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase, class IIc; aminoacyl tRNA synthetase, class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 1722728..1723744 Psychromonas ingrahamii 37 4623818 YP_942820.1 CDS Ping_1404 NC_008709.1 1723756 1726143 D KEGG: cps:CPS_2995 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 1723756..1726143 Psychromonas ingrahamii 37 4623819 YP_942821.1 CDS Ping_1405 NC_008709.1 1726147 1726449 D TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: plu:plu2663 integration host factor alpha chain (IHF-alpha); integration host factor subunit alpha 1726147..1726449 Psychromonas ingrahamii 37 4623820 YP_942822.1 CDS Ping_1406 NC_008709.1 1726941 1727696 D PFAM: Silent information regulator protein Sir2; KEGG: vch:VC1509 nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase; 5,6-dimethylbenzimidazole phosphoribosyltransferase 1726941..1727696 Psychromonas ingrahamii 37 4626958 YP_942823.1 CDS Ping_1407 NC_008709.1 1728054 1728830 D KEGG: ilo:IL1308 hypothetical protein; hypothetical protein 1728054..1728830 Psychromonas ingrahamii 37 4626959 YP_942824.1 CDS Ping_1408 NC_008709.1 1728873 1729538 D KEGG: pha:PSHAa1276 hypothetical protein; hypothetical protein 1728873..1729538 Psychromonas ingrahamii 37 4626960 YP_942825.1 CDS Ping_1409 NC_008709.1 1729543 1730406 D PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: ilo:IL2355 choline kinase involved in LPS biosynthesis; aminoglycoside phosphotransferase 1729543..1730406 Psychromonas ingrahamii 37 4626961 YP_942826.1 CDS Ping_1410 NC_008709.1 1730616 1731293 D catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 1730616..1731293 Psychromonas ingrahamii 37 4626962 YP_942827.1 CDS Ping_1411 NC_008709.1 1731342 1732814 D PFAM: FAD dependent oxidoreductase; KEGG: cps:CPS_0260 hypothetical protein; FAD dependent oxidoreductase 1731342..1732814 Psychromonas ingrahamii 37 4626963 YP_942828.1 CDS Ping_1412 NC_008709.1 1732862 1734316 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(1732862..1734316) Psychromonas ingrahamii 37 4626964 YP_942829.1 CDS Ping_1413 NC_008709.1 1734540 1734737 D KEGG: ppr:PBPRA1377 hypothetical protein; hypothetical protein 1734540..1734737 Psychromonas ingrahamii 37 4626965 YP_942830.1 CDS Ping_1414 NC_008709.1 1734920 1735399 D KEGG: vpa:VPA0046 methylated-DNA-protein-cysteine S-methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylguanine DNA methyltransferase, ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 1734920..1735399 Psychromonas ingrahamii 37 4626966 YP_942831.1 CDS Ping_1415 NC_008709.1 1735670 1735906 D KEGG: ppr:PBPRB0663 hypothetical protein; hypothetical protein 1735670..1735906 Psychromonas ingrahamii 37 4626967 YP_942832.1 CDS Ping_1416 NC_008709.1 1737267 1738445 D PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pfo:Pfl_0801 ornithine decarboxylase; ornithine decarboxylase 1737267..1738445 Psychromonas ingrahamii 37 4626968 YP_942833.1 CDS Ping_1417 NC_008709.1 1738636 1740162 D PFAM: GCN5-related N-acetyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bth:BT0804 putative carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1738636..1740162 Psychromonas ingrahamii 37 4626969 YP_942834.1 CDS Ping_1418 NC_008709.1 1740417 1743248 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: ppr:PBPRA1407 putative ferredoxin; FAD linked oxidase domain-containing protein complement(1740417..1743248) Psychromonas ingrahamii 37 4626970 YP_942835.1 CDS Ping_1419 NC_008709.1 1743352 1744002 R PFAM: protein of unknown function DUF162; KEGG: ppr:PBPRA1408 hypothetical protein; hypothetical protein complement(1743352..1744002) Psychromonas ingrahamii 37 4626971 YP_942836.1 CDS Ping_1420 NC_008709.1 1743999 1745459 R TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: ppr:PBPRA1409 conserved hypothetical iron-sulphur protein; iron-sulfur cluster binding protein complement(1743999..1745459) Psychromonas ingrahamii 37 4626972 YP_942837.1 CDS Ping_1421 NC_008709.1 1745579 1746331 R PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: ppr:PBPRA1410 hypothetical protein; hypothetical protein complement(1745579..1746331) Psychromonas ingrahamii 37 4626973 YP_942838.1 CDS Ping_1422 NC_008709.1 1746496 1748202 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ppr:PBPRA1411 putative L-lactate permease; L-lactate transport complement(1746496..1748202) Psychromonas ingrahamii 37 4626974 YP_942839.1 CDS Ping_1423 NC_008709.1 1748361 1749296 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppr:PBPRA1412 putative transcriptional regulator, LysR family; LysR family transcriptional regulator 1748361..1749296 Psychromonas ingrahamii 37 4626975 YP_942840.1 CDS Ping_1424 NC_008709.1 1749354 1749851 R PFAM: NosL family protein; KEGG: ppr:PBPRB0851 hypothetical NosL protein; protein disulfide isomerase NosL family protein complement(1749354..1749851) Psychromonas ingrahamii 37 4626976 YP_942841.1 CDS Ping_1425 NC_008709.1 1750718 1751536 R PFAM: ABC-2 type transporter; KEGG: ppr:PBPRB0850 hypothetical nitrous oxide metabolic protein; ABC-2 type transporter for copper permease complement(1750718..1751536) Psychromonas ingrahamii 37 4625487 YP_942842.1 CDS Ping_1426 NC_008709.1 1751533 1752444 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRB0849 hypothetical NosF protein; ABC transporter for copper ATP-binding protein complement(1751533..1752444) Psychromonas ingrahamii 37 4625488 YP_942843.1 CDS Ping_1427 NC_008709.1 1752478 1753803 R PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: ppr:PBPRB0848 hypothetical NosD, nitrous oxidase accessory protein; LacI family transcriptional regulator complement(1752478..1753803) Psychromonas ingrahamii 37 4625489 YP_942844.1 CDS Ping_1428 NC_008709.1 1753879 1755771 R reduces nitrous oxide to nitrogen; nitrous-oxide reductase complement(1753879..1755771) Psychromonas ingrahamii 37 4625490 YP_942845.1 CDS Ping_1429 NC_008709.1 1755876 1758002 R PFAM: FMN-binding domain protein; KEGG: ppr:PBPRB0846 hypothetical NosR, regulator of nitric oxide reductase transcription; FMN-binding domain-containing protein complement(1755876..1758002) Psychromonas ingrahamii 37 4625491 YP_942846.1 CDS Ping_1430 NC_008709.1 1759014 1761536 D PFAM: Ig domain protein, group 2 domain protein; KEGG: rfr:Rfer_1881 Ig-like, group 2; Ig domain-containing protein 1759014..1761536 Psychromonas ingrahamii 37 4625492 YP_942847.1 CDS Ping_1431 NC_008709.1 1761903 1762199 D KEGG: cps:CPS_3098 hypothetical protein; hypothetical protein 1761903..1762199 Psychromonas ingrahamii 37 4625493 YP_942848.1 CDS Ping_1432 NC_008709.1 1762373 1762567 D KEGG: dps:DP0934 hypothetical protein; hypothetical protein 1762373..1762567 Psychromonas ingrahamii 37 4625494 YP_942849.1 CDS Ping_1433 NC_008709.1 1762610 1763416 D PFAM: protein of unknown function DUF81; KEGG: son:SO2846 hypothetical protein; permease 1762610..1763416 Psychromonas ingrahamii 37 4625495 YP_942850.1 CDS Ping_1434 NC_008709.1 1764266 1766335 R KEGG: cps:CPS_0569 hypothetical protein; hypothetical protein complement(1764266..1766335) Psychromonas ingrahamii 37 4625496 YP_942851.1 CDS Ping_1435 NC_008709.1 1766946 1767812 D hypothetical protein 1766946..1767812 Psychromonas ingrahamii 37 4625497 YP_942852.1 CDS Ping_1436 NC_008709.1 1768414 1769283 D hypothetical protein 1768414..1769283 Psychromonas ingrahamii 37 4625498 YP_942853.1 CDS Ping_1437 NC_008709.1 1769732 1771396 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(1769732..1771396) Psychromonas ingrahamii 37 4625499 YP_942854.1 CDS Ping_1438 NC_008709.1 1771646 1772911 D PFAM: Orn/Lys/Arg decarboxylase, major region; glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pat:Patl_1299 glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 1771646..1772911 Psychromonas ingrahamii 37 4625500 YP_942855.1 CDS Ping_1439 NC_008709.1 1773119 1773574 D PFAM: ATP-cone domain protein; KEGG: pha:PSHAa2375 transcriptional regulator; ATP-cone domain-containing protein 1773119..1773574 Psychromonas ingrahamii 37 4625501 YP_942856.1 CDS Ping_1440 NC_008709.1 1773649 1774812 D KEGG: ppr:PBPRA0797 putative pyrimidine deaminase/pyrimidine reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase 1773649..1774812 Psychromonas ingrahamii 37 4625502 YP_942857.1 CDS Ping_1441 NC_008709.1 1774814 1775476 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1774814..1775476 Psychromonas ingrahamii 37 4625503 YP_942858.1 CDS Ping_1442 NC_008709.1 1775666 1776772 D PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: vvy:VV0863 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1775666..1776772 Psychromonas ingrahamii 37 4625504 YP_942859.1 CDS Ping_1443 NC_008709.1 1776853 1777320 D PFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: vpa:VP0682 riboflavin synthase, beta subunit; riboflavin synthase 1776853..1777320 Psychromonas ingrahamii 37 4625505 YP_942860.1 CDS Ping_1444 NC_008709.1 1777320 1777757 D TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: eca:ECA1128 N utilization substance protein B; NusB antitermination factor 1777320..1777757 Psychromonas ingrahamii 37 4624561 YP_942861.1 CDS Ping_1445 NC_008709.1 1777911 1778633 D KEGG: pat:Patl_3913 hypothetical protein; hypothetical protein 1777911..1778633 Psychromonas ingrahamii 37 4624562 YP_942862.1 CDS Ping_1446 NC_008709.1 1778647 1779591 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: eba:ebA4464 hypothetical protein; hypothetical protein 1778647..1779591 Psychromonas ingrahamii 37 4624563 YP_942863.1 CDS Ping_1447 NC_008709.1 1779616 1780164 R KEGG: cps:CPS_4817 peptide methionine sulfoxide reductase MsrA; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(1779616..1780164) Psychromonas ingrahamii 37 4624564 YP_942864.1 CDS Ping_1448 NC_008709.1 1781124 1781810 D KEGG: sdn:Sden_0379 hypothetical protein; hypothetical protein 1781124..1781810 Psychromonas ingrahamii 37 4624565 YP_942865.1 CDS Ping_1449 NC_008709.1 1781818 1783740 D PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO4323 GGDEF domain protein; cyclic-di-GMP regulatory protein 1781818..1783740 Psychromonas ingrahamii 37 4624566 YP_942866.1 CDS Ping_1450 NC_008709.1 1784073 1787117 D PFAM: FAD linked oxidase domain protein; KEGG: ppr:PBPRA1294 hypothetical Fe-S oxidoreductase; FAD linked oxidase domain-containing protein 1784073..1787117 Psychromonas ingrahamii 37 4624567 YP_942867.1 CDS Ping_1451 NC_008709.1 1787164 1787592 D TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: vch:VCA0580 hypothetical protein; phenylacetic acid degradation-like protein 1787164..1787592 Psychromonas ingrahamii 37 4624568 YP_942868.1 CDS Ping_1452 NC_008709.1 1787689 1788522 D SMART: RNA binding S1 domain protein; KEGG: vpa:VP1613 hypothetical protein; RNA-binding S1 domain-containing protein 1787689..1788522 Psychromonas ingrahamii 37 4624569 YP_942869.1 CDS Ping_1453 NC_008709.1 1788595 1791912 R PFAM: MscS Mechanosensitive ion channel; KEGG: noc:Noc_2151 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(1788595..1791912) Psychromonas ingrahamii 37 4624570 YP_942870.1 CDS Ping_1454 NC_008709.1 1792206 1793834 R PFAM: sulfatase; protein of unknown function DUF1705; KEGG: vfi:VFA0210 integral membrane protein; sulfatase complement(1792206..1793834) Psychromonas ingrahamii 37 4624571 YP_942871.1 CDS Ping_1455 NC_008709.1 1794451 1795452 D catalyzes the formation of inosine from adenosine; adenosine deaminase 1794451..1795452 Psychromonas ingrahamii 37 4625416 YP_942872.1 CDS Ping_1456 NC_008709.1 1795723 1795881 D KEGG: son:SO0515 hypothetical protein; hypothetical protein 1795723..1795881 Psychromonas ingrahamii 37 4625417 YP_942873.1 CDS Ping_1457 NC_008709.1 1795936 1796625 D hypothetical protein 1795936..1796625 Psychromonas ingrahamii 37 4626016 YP_942874.1 CDS Ping_1458 NC_008709.1 1796742 1800191 D TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: ppr:PBPRA2999 putative exodeoxyribonuclease V; exodeoxyribonuclease V subunit gamma 1796742..1800191 Psychromonas ingrahamii 37 4626017 YP_942875.1 CDS Ping_1459 NC_008709.1 1800277 1803957 D TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: vfi:VF0582 exodeoxyribonuclease V beta chain; exodeoxyribonuclease V subunit beta 1800277..1803957 Psychromonas ingrahamii 37 4626018 YP_942876.1 CDS Ping_1460 NC_008709.1 1803951 1806047 D TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: vvu:VV11797 ATP-dependent exoDNAse alpha subunit; exodeoxyribonuclease V subunit alpha 1803951..1806047 Psychromonas ingrahamii 37 4626019 YP_942877.1 CDS Ping_1461 NC_008709.1 1806241 1806708 D TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: cps:CPS_3090 YbaK/EbsC protein; ybaK/ebsC protein 1806241..1806708 Psychromonas ingrahamii 37 4626020 YP_942878.1 CDS Ping_1462 NC_008709.1 1806753 1807691 D KEGG: dps:DP1377 hypothetical protein; hypothetical protein 1806753..1807691 Psychromonas ingrahamii 37 4626021 YP_942879.1 CDS Ping_1463 NC_008709.1 1807844 1808446 D PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: pca:Pcar_3029 conserved hypothetical protein TIGR00427; multiple antibiotic resistance (MarC)-like protein 1807844..1808446 Psychromonas ingrahamii 37 4626022 YP_942880.1 CDS Ping_1464 NC_008709.1 1808940 1810247 D TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase, FKBP-type; trigger factor, C-terminal domain protein; trigger factor, N-terminal domain; KEGG: pat:Patl_3137 trigger factor; trigger factor 1808940..1810247 Psychromonas ingrahamii 37 4626023 YP_942881.1 CDS Ping_1465 NC_008709.1 1810416 1811039 D KEGG: ppr:PBPRA2637 putative ATP-dependent Clp protease, proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14, ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 1810416..1811039 Psychromonas ingrahamii 37 4626024 YP_942882.1 CDS clpX NC_008709.1 1811054 1812331 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1811054..1812331 Psychromonas ingrahamii 37 4626025 YP_942883.1 CDS Ping_1467 NC_008709.1 1812487 1814844 D KEGG: son:SO1796 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1812487..1814844 Psychromonas ingrahamii 37 4626026 YP_942884.1 CDS Ping_1468 NC_008709.1 1815002 1815277 D PFAM: histone family protein DNA-binding protein; KEGG: pha:PSHAa2059 DNA-binding protein; DNA-binding protein HU beta subunit 1815002..1815277 Psychromonas ingrahamii 37 4626027 YP_942885.1 CDS Ping_1469 NC_008709.1 1815513 1817408 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ppr:PBPRA2633 putative peptidyl-prolyl cis-trans isomerase D; PpiC-type peptidyl-prolyl cis-trans isomerase 1815513..1817408 Psychromonas ingrahamii 37 4626028 YP_942886.1 CDS Ping_1470 NC_008709.1 1817565 1818137 R Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P complement(1817565..1818137) Psychromonas ingrahamii 37 4626029 YP_942887.1 CDS Ping_1471 NC_008709.1 1818213 1818539 R PFAM: DsrC family protein; KEGG: pha:PSHAa1687 anaerobic sulfite reductase subunit gamma; sulfur oxidation protein of DsrC family protein complement(1818213..1818539) Psychromonas ingrahamii 37 4626030 YP_942888.1 CDS Ping_1472 NC_008709.1 1818641 1820842 R TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893, YccS/YhfK; KEGG: plu:plu1778 hypothetical protein; integral membrane protein, YccS/YhfK family protein complement(1818641..1820842) Psychromonas ingrahamii 37 4626031 YP_942889.1 CDS Ping_1473 NC_008709.1 1821086 1821943 D PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: vpa:VP0879 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; methylenetetrahydrofolate dehydrogenase 1821086..1821943 Psychromonas ingrahamii 37 4626032 YP_942890.1 CDS Ping_1474 NC_008709.1 1822557 1823492 D PFAM: porin, Gram-negative type; KEGG: vvy:VV2720 outer membrane protein OmpU; porin 1822557..1823492 Psychromonas ingrahamii 37 4626033 YP_942891.1 CDS Ping_1475 NC_008709.1 1823709 1824923 R broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT complement(1823709..1824923) Psychromonas ingrahamii 37 4625815 YP_942892.1 CDS merR NC_008709.1 1825108 1826049 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: metR; transcriptional activator MetR; transcriptional regulator MetR 1825108..1826049 Psychromonas ingrahamii 37 4625816 YP_942893.1 CDS Ping_1477 NC_008709.1 1826127 1827374 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: ppr:PBPRA2010 putative molybdopterin biosynthesis protein MoeA; molybdenum cofactor synthesis domain-containing protein 1826127..1827374 Psychromonas ingrahamii 37 4625817 YP_942894.1 CDS Ping_1478 NC_008709.1 1827445 1828494 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1827445..1828494 Psychromonas ingrahamii 37 4625818 YP_942895.1 CDS Ping_1480 NC_008709.1 1830111 1830842 D PFAM: carbonic anhydrase; KEGG: hch:HCH_00805 carbonic anhydrase; carbonate dehydratase 1830111..1830842 Psychromonas ingrahamii 37 4625820 YP_942896.1 CDS Ping_1481 NC_008709.1 1830906 1831559 R KEGG: cps:CPS_1053 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase complement(1830906..1831559) Psychromonas ingrahamii 37 4625821 YP_942897.1 CDS Ping_1482 NC_008709.1 1831654 1832247 D PFAM: protein of unknown function DUF462; KEGG: vch:VC2113 hypothetical protein; hypothetical protein 1831654..1832247 Psychromonas ingrahamii 37 4625822 YP_942898.1 CDS Ping_1483 NC_008709.1 1832244 1832645 D PFAM: thioesterase superfamily protein; KEGG: ppr:PBPRA1461 hypothetical protein; thioesterase superfamily protein 1832244..1832645 Psychromonas ingrahamii 37 4625823 YP_942899.1 CDS Ping_1485 NC_008709.1 1833930 1834937 R PFAM: Integrase, catalytic region; KEGG: plu:plu3016 transposase, IS30 family; integrase catalytic subunit complement(1833930..1834937) Psychromonas ingrahamii 37 4625825 YP_942900.1 CDS Ping_1486 NC_008709.1 1835143 1835679 D hypothetical protein 1835143..1835679 Psychromonas ingrahamii 37 4625826 YP_942901.1 CDS Ping_1487 NC_008709.1 1835974 1836150 D hypothetical protein 1835974..1836150 Psychromonas ingrahamii 37 4625827 YP_942902.1 CDS Ping_1488 NC_008709.1 1836489 1836941 D KEGG: vch:VC1498 GAF domain-containing protein; GAF domain-containing protein 1836489..1836941 Psychromonas ingrahamii 37 4625828 YP_942903.1 CDS Ping_1489 NC_008709.1 1837207 1837845 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1837207..1837845 Psychromonas ingrahamii 37 4625829 YP_942904.1 CDS Ping_1490 NC_008709.1 1837963 1838667 D KEGG: son:SO4011 hypothetical protein; hypothetical protein 1837963..1838667 Psychromonas ingrahamii 37 4625830 YP_942905.1 CDS Ping_1491 NC_008709.1 1838960 1839433 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: pat:Patl_4071 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 1838960..1839433 Psychromonas ingrahamii 37 4625831 YP_942906.1 CDS Ping_1492 NC_008709.1 1839430 1840473 D KEGG: vch:VC2487 hypothetical protein; hypothetical protein 1839430..1840473 Psychromonas ingrahamii 37 4625832 YP_942907.1 CDS Ping_1493 NC_008709.1 1840552 1841160 R negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR complement(1840552..1841160) Psychromonas ingrahamii 37 4626549 YP_942908.1 CDS Ping_1494 NC_008709.1 1841378 1842496 D PFAM: fatty acid desaturase; KEGG: ppr:PBPRB0742 hypothetical putative delta-9 fatty acid desaturase; stearoyl-CoA 9-desaturase 1841378..1842496 Psychromonas ingrahamii 37 4626550 YP_942909.1 CDS Ping_1495 NC_008709.1 1842789 1843370 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: lpn:lpg1172 TPR repeat protein; TPR repeat- and Sel1 domain-containing protein 1842789..1843370 Psychromonas ingrahamii 37 4626551 YP_942910.1 CDS Ping_1496 NC_008709.1 1843705 1843977 D hypothetical protein 1843705..1843977 Psychromonas ingrahamii 37 4626552 YP_942911.1 CDS Ping_1497 NC_008709.1 1844099 1845196 D PFAM: Radical SAM domain protein; KEGG: ppr:PBPRA1252 hypothetical pyruvate formate lyase-activating enzyme; radical SAM protein 1844099..1845196 Psychromonas ingrahamii 37 4626553 YP_942912.1 CDS Ping_1499 NC_008709.1 1845512 1847374 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hch:HCH_03305 FOG: TPR repeat; hypothetical protein complement(1845512..1847374) Psychromonas ingrahamii 37 4626555 YP_942913.1 CDS Ping_1500 NC_008709.1 1847556 1848602 R PFAM: protein of unknown function DUF1555; KEGG: hch:HCH_05909 protein of unknown function (DUF1555); hypothetical protein complement(1847556..1848602) Psychromonas ingrahamii 37 4626556 YP_942914.1 CDS Ping_1502 NC_008709.1 1849706 1850023 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mca:MCA0987 rieske 2Fe-2S family protein; Rieske (2Fe-2S) domain-containing protein complement(1849706..1850023) Psychromonas ingrahamii 37 4626558 YP_942915.1 CDS Ping_1503 NC_008709.1 1850043 1850582 R PFAM: protein of unknown function DUF59; KEGG: hch:HCH_01409 predicted metal-sulfur cluster biosynthetic enzyme; aromatic ring hydroxylating enzyme complement(1850043..1850582) Psychromonas ingrahamii 37 4626559 YP_942916.1 CDS Ping_1504 NC_008709.1 1850588 1851049 R TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: pol:Bpro_4273 SUF system FeS assembly protein; SUF system FeS assembly protein, NifU family protein complement(1850588..1851049) Psychromonas ingrahamii 37 4626560 YP_942917.1 CDS Ping_1505 NC_008709.1 1851055 1852332 R TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: noc:Noc_2487 cysteine desulphurases, SufS; cysteine desulfurase SufS subfamily protein complement(1851055..1852332) Psychromonas ingrahamii 37 4626561 YP_942918.1 CDS Ping_1506 NC_008709.1 1852323 1853750 R TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: pol:Bpro_4271 FeS assembly protein SufD; FeS assembly protein SufD complement(1852323..1853750) Psychromonas ingrahamii 37 4626562 YP_942919.1 CDS Ping_1507 NC_008709.1 1853802 1854596 R KEGG: noc:Noc_2489 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC complement(1853802..1854596) Psychromonas ingrahamii 37 4626563 YP_942920.1 CDS Ping_1508 NC_008709.1 1854624 1856075 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(1854624..1856075) Psychromonas ingrahamii 37 4626564 YP_942921.1 CDS Ping_1510 NC_008709.1 1856959 1857423 R KEGG: ecc:c2599 hypothetical protein YegL; hypothetical protein complement(1856959..1857423) Psychromonas ingrahamii 37 4626566 YP_942922.1 CDS Ping_1511 NC_008709.1 1857433 1858029 R KEGG: ppr:PBPRB1782 putative transposase; putative transposase complement(1857433..1858029) Psychromonas ingrahamii 37 4626567 YP_942923.1 CDS Ping_1512 NC_008709.1 1857980 1858465 R KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative complement(1857980..1858465) Psychromonas ingrahamii 37 4626533 YP_942924.1 CDS Ping_1513 NC_008709.1 1858514 1858756 R hypothetical protein complement(1858514..1858756) Psychromonas ingrahamii 37 4626534 YP_942925.1 CDS Ping_1514 NC_008709.1 1859610 1860332 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_402 probable ATP-binding component of ABC transporter; ABC transporter ATP-binding protein complement(1859610..1860332) Psychromonas ingrahamii 37 4626535 YP_942926.1 CDS Ping_1515 NC_008709.1 1860329 1860979 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_403 probable permease of ABC transporter; polar amino acid ABC transporter inner membrane protein complement(1860329..1860979) Psychromonas ingrahamii 37 4626536 YP_942927.1 CDS Ping_1516 NC_008709.1 1860979 1861650 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_405 probable permease of ABC transporter; polar amino acid ABC transporter inner membrane protein complement(1860979..1861650) Psychromonas ingrahamii 37 4626537 YP_942928.1 CDS Ping_1517 NC_008709.1 1862069 1862896 R PFAM: extracellular solute-binding protein, family 3; KEGG: atc:AGR_L_407 probable binding protein component of ABC transporter; ABC transporter extracellular solute-binding protein complement(1862069..1862896) Psychromonas ingrahamii 37 4626538 YP_942929.1 CDS Ping_1518 NC_008709.1 1863986 1864909 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bth:BT1616 hypothetical protein; endonuclease/exonuclease/phosphatase complement(1863986..1864909) Psychromonas ingrahamii 37 4626539 YP_942930.1 CDS Ping_1520 NC_008709.1 1866038 1866457 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: pol:Bpro_1463 putative protein-S-isoprenylcysteine methyltransferase-like; isoprenylcysteine carboxyl methyltransferase 1866038..1866457 Psychromonas ingrahamii 37 4626541 YP_942931.1 CDS Ping_1521 NC_008709.1 1867444 1868922 D KEGG: gme:Gmet_2469 fibronectin, type III; hypothetical protein 1867444..1868922 Psychromonas ingrahamii 37 4626542 YP_942932.1 CDS Ping_1522 NC_008709.1 1869393 1870085 D hypothetical protein 1869393..1870085 Psychromonas ingrahamii 37 4626543 YP_942933.1 CDS Ping_1523 NC_008709.1 1870325 1871560 R PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_2675 initiation factor 2; major facilitator superfamily transporter complement(1870325..1871560) Psychromonas ingrahamii 37 4626544 YP_942934.1 CDS Ping_1524 NC_008709.1 1871858 1872070 R KEGG: ilo:IL2326 hypothetical protein; hypothetical protein complement(1871858..1872070) Psychromonas ingrahamii 37 4626545 YP_942935.1 CDS Ping_1525 NC_008709.1 1872439 1872963 R PFAM: Uncharacterized protein UPF0114; KEGG: pcr:Pcryo_2515 Uncharacterized protein UPF0114; hypothetical protein complement(1872439..1872963) Psychromonas ingrahamii 37 4626546 YP_942936.1 CDS Ping_1526 NC_008709.1 1873332 1873502 R KEGG: sdn:Sden_3438 K+-dependent Na+/Ca+ exchanger related-protein; K+-dependent Na+/Ca+ exchanger-like protein complement(1873332..1873502) Psychromonas ingrahamii 37 4626547 YP_942937.1 CDS Ping_1527 NC_008709.1 1874949 1875326 D KEGG: cps:CPS_3965 hypothetical protein; hypothetical protein 1874949..1875326 Psychromonas ingrahamii 37 4626548 YP_942938.1 CDS Ping_1529 NC_008709.1 1876474 1877055 D PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase; carbonic anhydrase 1876474..1877055 Psychromonas ingrahamii 37 4626195 YP_942939.1 CDS Ping_1530 NC_008709.1 1877172 1877549 D KEGG: cps:CPS_3965 hypothetical protein; hypothetical protein 1877172..1877549 Psychromonas ingrahamii 37 4626196 YP_942940.1 CDS Ping_1531 NC_008709.1 1877756 1878667 R PFAM: pseudouridine synthase; KEGG: sdn:Sden_0482 pseudouridine synthase; pseudouridine synthase complement(1877756..1878667) Psychromonas ingrahamii 37 4626197 YP_942941.1 CDS Ping_1532 NC_008709.1 1879040 1880365 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0199 putative ATP-dependent RNA helicase; ATP-dependent RNA helicase 1879040..1880365 Psychromonas ingrahamii 37 4626198 YP_942942.1 CDS Ping_1533 NC_008709.1 1880892 1881314 D PFAM: heat shock protein Hsp20; KEGG: mac:MA0133 small heat shock protein; heat shock protein Hsp20 1880892..1881314 Psychromonas ingrahamii 37 4626199 YP_942943.1 CDS Ping_1534 NC_008709.1 1881745 1882296 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mma:MM3105 putative cytosine deaminase; zinc-binding CMP/dCMP deaminase complement(1881745..1882296) Psychromonas ingrahamii 37 4626200 YP_942944.1 CDS Ping_1535 NC_008709.1 1882943 1883338 R KEGG: abo:ABO_1884 hypothetical protein; hypothetical protein complement(1882943..1883338) Psychromonas ingrahamii 37 4626201 YP_942945.1 CDS Ping_1537 NC_008709.1 1884037 1884201 R hypothetical protein complement(1884037..1884201) Psychromonas ingrahamii 37 4626203 YP_942946.1 CDS Ping_1538 NC_008709.1 1884745 1885179 D KEGG: sdn:Sden_3399 transposase, IS4; transposase, IS4 1884745..1885179 Psychromonas ingrahamii 37 4626204 YP_942947.1 CDS Ping_1539 NC_008709.1 1885249 1885392 D KEGG: neu:NE2504 transposase IS4 family; transposase IS4 family protein 1885249..1885392 Psychromonas ingrahamii 37 4626205 YP_942948.1 CDS Ping_1540 NC_008709.1 1885591 1885965 R KEGG: dps:DP2505 hypothetical protein; hypothetical protein complement(1885591..1885965) Psychromonas ingrahamii 37 4626206 YP_942949.1 CDS Ping_1542 NC_008709.1 1887166 1887462 D KEGG: cps:CPS_2457 hypothetical protein; hypothetical protein 1887166..1887462 Psychromonas ingrahamii 37 4626208 YP_942950.1 CDS Ping_1543 NC_008709.1 1888116 1891946 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(1888116..1891946) Psychromonas ingrahamii 37 4626209 YP_942951.1 CDS Ping_1544 NC_008709.1 1893078 1894088 D PFAM: peptidase M23B; KEGG: vpa:VPA1649 putative TagE protein; peptidase M23B 1893078..1894088 Psychromonas ingrahamii 37 4626210 YP_942952.1 CDS Ping_1545 NC_008709.1 1893992 1894465 D PFAM: protein of unknown function DUF583; KEGG: ppr:PBPRA0655 hypothetical Ccm2-related protein; hypothetical protein 1893992..1894465 Psychromonas ingrahamii 37 4626211 YP_942953.1 CDS Ping_1548 NC_008709.1 1896177 1897523 D KEGG: pat:Patl_0152 deoxyribodipyrimidine photolyase; TIGRFAM: DNA photolyase, FAD- binding- domain protein; PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; DNA photolyase FAD-binding subunit 1896177..1897523 Psychromonas ingrahamii 37 4626413 YP_942954.1 CDS Ping_1549 NC_008709.1 1897530 1899083 D PFAM: DNA photolyase, FAD-binding; KEGG: pat:Patl_0151 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase 1897530..1899083 Psychromonas ingrahamii 37 4626414 YP_942955.1 CDS Ping_1550 NC_008709.1 1899090 1899272 D KEGG: pcr:Pcryo_0448 hypothetical protein; hypothetical protein 1899090..1899272 Psychromonas ingrahamii 37 4626415 YP_942956.1 CDS Ping_1551 NC_008709.1 1899362 1900912 D PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: son:SO4169 hypothetical protein; deoxyribodipyrimidine photolyase-like protein 1899362..1900912 Psychromonas ingrahamii 37 4626416 YP_942957.1 CDS Ping_1552 NC_008709.1 1901181 1901939 D PFAM: transposase, IS4 family protein; KEGG: son:SOA0162 ISSod6, transposase; transposase, IS4 family protein 1901181..1901939 Psychromonas ingrahamii 37 4626417 YP_942958.1 CDS Ping_1553 NC_008709.1 1902497 1903129 R PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: rxy:Rxyl_0955 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like protein complement(1902497..1903129) Psychromonas ingrahamii 37 4626418 YP_942959.1 CDS Ping_1555 NC_008709.1 1904320 1904592 D hypothetical protein 1904320..1904592 Psychromonas ingrahamii 37 4626420 YP_942960.1 CDS Ping_1556 NC_008709.1 1904712 1905368 D KEGG: tbd:Tbd_1018 putative lipoprotein; putative lipoprotein 1904712..1905368 Psychromonas ingrahamii 37 4626421 YP_942961.1 CDS Ping_1557 NC_008709.1 1906014 1906304 D hypothetical protein 1906014..1906304 Psychromonas ingrahamii 37 4626422 YP_942962.1 CDS Ping_1559 NC_008709.1 1907327 1908088 R hypothetical protein complement(1907327..1908088) Psychromonas ingrahamii 37 4626424 YP_942963.1 CDS Ping_1560 NC_008709.1 1908999 1909286 D KEGG: son:SO4135 ISSod7, transposase; ISSod7, transposase 1908999..1909286 Psychromonas ingrahamii 37 4626425 YP_942964.1 CDS Ping_1561 NC_008709.1 1909585 1909839 D hypothetical protein 1909585..1909839 Psychromonas ingrahamii 37 4626426 YP_942965.1 CDS Ping_1562 NC_008709.1 1910942 1912774 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase 1910942..1912774 Psychromonas ingrahamii 37 4626427 YP_942966.1 CDS Ping_1564 NC_008709.1 1913750 1914169 R KEGG: pol:Bpro_1827 hypothetical protein; hypothetical protein complement(1913750..1914169) Psychromonas ingrahamii 37 4626429 YP_942967.1 CDS Ping_1565 NC_008709.1 1914855 1915637 R KEGG: plt:Plut_1514 carbon-nitrogen hydrolase family protein; amidohydrolase complement(1914855..1915637) Psychromonas ingrahamii 37 4626430 YP_942968.1 CDS Ping_1567 NC_008709.1 1916737 1918191 R PFAM: protein of unknown function UPF0061; KEGG: dps:DP3021 hypothetical protein; hypothetical protein complement(1916737..1918191) Psychromonas ingrahamii 37 4625419 YP_942969.1 CDS Ping_1569 NC_008709.1 1919547 1920236 R PFAM: protein of unknown function DUF125, transmembrane; KEGG: rfr:Rfer_1963 protein of unknown function DUF125, transmembrane; hypothetical protein complement(1919547..1920236) Psychromonas ingrahamii 37 4625421 YP_942970.1 CDS prpD NC_008709.1 1920976 1922421 D functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 1920976..1922421 Psychromonas ingrahamii 37 4625424 YP_942971.1 CDS Ping_1573 NC_008709.1 1922649 1923065 D PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: sdn:Sden_2395 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1922649..1923065 Psychromonas ingrahamii 37 4625425 YP_942972.1 CDS Ping_1574 NC_008709.1 1923182 1924378 R PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa2409 permease; major facilitator superfamily transporter complement(1923182..1924378) Psychromonas ingrahamii 37 4625426 YP_942973.1 CDS Ping_1575 NC_008709.1 1925177 1926367 D PFAM: AFG1-family ATPase; KEGG: pat:Patl_2704 AFG1-like ATPase; AFG1 family ATPase 1925177..1926367 Psychromonas ingrahamii 37 4625427 YP_942974.1 CDS Ping_1576 NC_008709.1 1926602 1926895 R hypothetical protein complement(1926602..1926895) Psychromonas ingrahamii 37 4625428 YP_942975.1 CDS Ping_1577 NC_008709.1 1927621 1929096 D PFAM: FAD dependent oxidoreductase; KEGG: ppr:PBPRB0641 hypothetical protein; FAD dependent oxidoreductase 1927621..1929096 Psychromonas ingrahamii 37 4625429 YP_942976.1 CDS Ping_1578 NC_008709.1 1929197 1929871 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pst:PSPTO_1638 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 1929197..1929871 Psychromonas ingrahamii 37 4625430 YP_942977.1 CDS Ping_1579 NC_008709.1 1929871 1932312 D PFAM: protein of unknown function DUF214; KEGG: vvy:VV1432 ABC-type antimicrobial peptide transport system, permease component; ABC-type transporter protein 1929871..1932312 Psychromonas ingrahamii 37 4625431 YP_942978.1 CDS Ping_1580 NC_008709.1 1932309 1933436 D KEGG: ppr:PBPRA1555 hypothetical secreted hydrolase; putative secreted hydrolase 1932309..1933436 Psychromonas ingrahamii 37 4625432 YP_942979.1 CDS Ping_1581 NC_008709.1 1933607 1934113 D KEGG: son:SO2978 prophage LambdaSo, site-specific recombinase, phage integrase family; hypothetical protein 1933607..1934113 Psychromonas ingrahamii 37 4625433 YP_942980.1 CDS Ping_1582 NC_008709.1 1934705 1935082 R hypothetical protein complement(1934705..1935082) Psychromonas ingrahamii 37 4625434 YP_942981.1 CDS Ping_1584 NC_008709.1 1937433 1938050 D hypothetical protein 1937433..1938050 Psychromonas ingrahamii 37 4625436 YP_942982.1 CDS Ping_1585 NC_008709.1 1939285 1940046 R KEGG: yps:YPTB1810 putative small subunit bacteriophage terminase; hypothetical protein complement(1939285..1940046) Psychromonas ingrahamii 37 4625382 YP_942983.1 CDS Ping_1586 NC_008709.1 1940498 1942969 D KEGG: ppr:PBPRC0040 hypothetical protein; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicases-like; hypothetical protein 1940498..1942969 Psychromonas ingrahamii 37 4625383 YP_942984.1 CDS Ping_1587 NC_008709.1 1942972 1943514 D TIGRFAM: CRISPR-associated protein, Cse3 family; KEGG: ppr:PBPRC0039 hypothetical protein; Fis family transcriptional regulator 1942972..1943514 Psychromonas ingrahamii 37 4625384 YP_942985.1 CDS Ping_1588 NC_008709.1 1943524 1943955 D KEGG: ppr:PBPRC0038 hypothetical protein; hypothetical protein 1943524..1943955 Psychromonas ingrahamii 37 4625385 YP_942986.1 CDS Ping_1589 NC_008709.1 1943988 1945001 D TIGRFAM: CRISPR-associated protein, Cse4 family; KEGG: ppr:PBPRC0037 hypothetical protein; CRISPR-associated Cse4 family protein 1943988..1945001 Psychromonas ingrahamii 37 4625386 YP_942987.1 CDS Ping_1590 NC_008709.1 1945022 1945675 D TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: ppr:PBPRC0036 hypothetical protein; CRISPR-associated Cas5 family protein 1945022..1945675 Psychromonas ingrahamii 37 4625387 YP_942988.1 CDS Ping_1591 NC_008709.1 1945662 1947128 D unknown function; in E. coli this protein is regulated by BaeR, a protein involved in resistance to novobiocin and deoxycholate; hypothetical protein 1945662..1947128 Psychromonas ingrahamii 37 4625388 YP_942989.1 CDS Ping_1592 NC_008709.1 1947183 1948100 D TIGRFAM: CRISPR-associated protein Cas1; KEGG: ppr:PBPRC0034 hypothetical protein; CRISPR-associated Cas1 family protein 1947183..1948100 Psychromonas ingrahamii 37 4625389 YP_942990.1 CDS Ping_1593 NC_008709.1 1948113 1948409 D TIGRFAM: CRISPR-associated protein Cas2; KEGG: ppr:PBPRC0033 hypothetical protein; hypothetical protein 1948113..1948409 Psychromonas ingrahamii 37 4625390 YP_942991.1 CDS Ping_1594 NC_008709.1 1951278 1951847 R PFAM: Resolvase, N-terminal domain; KEGG: ppr:PBPRA0888 hypothetical resolvase; resolvase domain-containing protein complement(1951278..1951847) Psychromonas ingrahamii 37 4625391 YP_942992.1 CDS Ping_1595 NC_008709.1 1951998 1952849 R KEGG: spj:MGAS2096_Spy0566 hypothetical protein; hypothetical protein complement(1951998..1952849) Psychromonas ingrahamii 37 4625392 YP_942993.1 CDS Ping_1596 NC_008709.1 1952992 1953447 R KEGG: son:SO0390.1 hypothetical protein; hypothetical protein complement(1952992..1953447) Psychromonas ingrahamii 37 4625393 YP_942994.1 CDS Ping_1597 NC_008709.1 1953763 1953936 R PFAM: Prophage CP4-57 regulatory; KEGG: lpn:lpg2563 prophage regulatory protein-like; phage transcriptional regulator AlpA complement(1953763..1953936) Psychromonas ingrahamii 37 4625394 YP_942995.1 CDS Ping_1598 NC_008709.1 1953936 1954175 R PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV0810 predicted transcriptional regulator; phage transcriptional regulator AlpA complement(1953936..1954175) Psychromonas ingrahamii 37 4625395 YP_942996.1 CDS Ping_1600 NC_008709.1 1955471 1956394 R hypothetical protein complement(1955471..1956394) Psychromonas ingrahamii 37 4624628 YP_942997.1 CDS Ping_1601 NC_008709.1 1956483 1957733 R PFAM: phage integrase family protein; KEGG: vvy:VV0817 phage integrase; phage integrase family protein complement(1956483..1957733) Psychromonas ingrahamii 37 4624629 YP_942998.1 CDS smpB NC_008709.1 1958394 1958879 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1958394..1958879) Psychromonas ingrahamii 37 4624631 YP_942999.1 CDS Ping_1603 NC_008709.1 1959042 1959479 D PFAM: cyclase/dehydrase; KEGG: vpa:VP0645 hypothetical protein; cyclase/dehydrase 1959042..1959479 Psychromonas ingrahamii 37 4624632 YP_943000.1 CDS Ping_1604 NC_008709.1 1959488 1959778 D PFAM: protein of unknown function UPF0125; KEGG: cps:CPS_3827 hypothetical protein; hypothetical protein 1959488..1959778 Psychromonas ingrahamii 37 4624633 YP_943001.1 CDS Ping_1605 NC_008709.1 1959862 1960308 R PFAM: SmpA/OmlA domain protein; KEGG: ppr:PBPRA0693 hypothetical small protein A; Outer membrane lipoprotein OmlA complement(1959862..1960308) Psychromonas ingrahamii 37 4624634 YP_943002.1 CDS Ping_1606 NC_008709.1 1960563 1961822 D PFAM: glutamyl-tRNA reductase; Shikimate/quinate 5-dehydrogenase; KEGG: vvu:VV10254 glutamyl-tRNA reductase; shikimate/quinate 5-dehydrogenase 1960563..1961822 Psychromonas ingrahamii 37 4624635 YP_943003.1 CDS Ping_1607 NC_008709.1 1961871 1962962 D TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: cps:CPS_3552 peptide chain release factor 1; peptide chain release factor 1 1961871..1962962 Psychromonas ingrahamii 37 4624636 YP_943004.1 CDS Ping_1608 NC_008709.1 1962963 1963802 D TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: vpa:VP0744 HemK protein; HemK family modification methylase 1962963..1963802 Psychromonas ingrahamii 37 4624637 YP_943005.1 CDS Ping_1609 NC_008709.1 1963830 1964216 D KEGG: son:SO3830 hypothetical protein; hypothetical protein 1963830..1964216 Psychromonas ingrahamii 37 4624638 YP_943006.1 CDS Ping_1610 NC_008709.1 1964220 1965065 D KEGG: vch:VC2176 conserved hypothetical protein; hypothetical protein 1964220..1965065 Psychromonas ingrahamii 37 4624639 YP_943007.1 CDS Ping_1611 NC_008709.1 1965081 1965926 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1965081..1965926 Psychromonas ingrahamii 37 4624640 YP_943008.1 CDS Ping_1612 NC_008709.1 1965926 1966339 D PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily; membrane protein 1965926..1966339 Psychromonas ingrahamii 37 4624641 YP_943009.1 CDS Ping_1613 NC_008709.1 1966609 1967706 D KEGG: vfi:VF0593 methyltransferase; putative RNA 2'-O-ribose methyltransferase 1966609..1967706 Psychromonas ingrahamii 37 4624642 YP_943010.1 CDS Ping_1614 NC_008709.1 1968069 1968620 R PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: vfi:VF1158 hypothetical membrane associated protein; hypothetical protein complement(1968069..1968620) Psychromonas ingrahamii 37 4624643 YP_943011.1 CDS Ping_1615 NC_008709.1 1968808 1970349 R KEGG: vfi:VF1157 cell wall degradation protein; cell wall degradation protein complement(1968808..1970349) Psychromonas ingrahamii 37 4624644 YP_943012.1 CDS pspC NC_008709.1 1970912 1971322 R PFAM: PspC domain protein; KEGG: ppr:PBPRA2437 hypothetical phage shock protein C; phage shock protein C complement(1970912..1971322) Psychromonas ingrahamii 37 4624645 YP_943013.1 CDS pspB NC_008709.1 1971319 1971540 R acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B complement(1971319..1971540) Psychromonas ingrahamii 37 4623603 YP_943014.1 CDS Ping_1618 NC_008709.1 1971842 1972138 D hypothetical protein 1971842..1972138 Psychromonas ingrahamii 37 4623604 YP_943015.1 CDS Ping_1619 NC_008709.1 1972418 1972696 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ppr:PBPRB0852 putative peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 1972418..1972696 Psychromonas ingrahamii 37 4623605 YP_943016.1 CDS Ping_1620 NC_008709.1 1972726 1973493 R TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hch:HCH_04101 predicted sugar phosphatase of the HAD superfamily; HAD family hydrolase complement(1972726..1973493) Psychromonas ingrahamii 37 4623606 YP_943017.1 CDS Ping_1621 NC_008709.1 1973864 1975144 D PFAM: beta-lactamase; KEGG: cps:CPS_1414 putative beta-lactamase; beta-lactamase 1973864..1975144 Psychromonas ingrahamii 37 4623607 YP_943018.1 CDS Ping_1622 NC_008709.1 1975332 1975916 D KEGG: son:SO1736 hypothetical protein; hypothetical protein 1975332..1975916 Psychromonas ingrahamii 37 4623608 YP_943019.1 CDS Ping_1623 NC_008709.1 1976194 1978254 R TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; KEGG: vfi:VF1754 methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1976194..1978254) Psychromonas ingrahamii 37 4623609 YP_943020.1 CDS Ping_1624 NC_008709.1 1978442 1979527 D KEGG: sdy:SDY_2182 putative ATPase; putative ATPase 1978442..1979527 Psychromonas ingrahamii 37 4623610 YP_943021.1 CDS Ping_1626 NC_008709.1 1981260 1982672 R TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: sdn:Sden_2533 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase complement(1981260..1982672) Psychromonas ingrahamii 37 4623613 YP_943022.1 CDS Ping_1627 NC_008709.1 1984817 1986034 D PFAM: Rh family protein/ammonium transporter; KEGG: hch:HCH_02676 ammonia permease; Rh family protein/ammonium transporter 1984817..1986034 Psychromonas ingrahamii 37 4623621 YP_943023.1 CDS Ping_1628 NC_008709.1 1986264 1986890 D TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: sdn:Sden_2093 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 1986264..1986890 Psychromonas ingrahamii 37 4623858 YP_943024.1 CDS Ping_1629 NC_008709.1 1987142 1988425 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sdn:Sden_1641 uracil-xanthine permease; uracil-xanthine permease 1987142..1988425 Psychromonas ingrahamii 37 4623859 YP_943025.1 CDS Ping_1630 NC_008709.1 1988864 1989172 D KEGG: dra:DR1284 hypothetical protein; hypothetical protein 1988864..1989172 Psychromonas ingrahamii 37 4623860 YP_943026.1 CDS Ping_1631 NC_008709.1 1989328 1989555 D hypothetical protein 1989328..1989555 Psychromonas ingrahamii 37 4623861 YP_943027.1 CDS Ping_1633 NC_008709.1 1990558 1993251 D TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_1535 hypothetical protein; HAD-superfamily phosphatase subfamily IIIC/FkbH domain-containing protein 1990558..1993251 Psychromonas ingrahamii 37 4623863 YP_943028.1 CDS Ping_1634 NC_008709.1 1993264 1993500 D KEGG: gme:Gmet_2339 putative acyl carrier protein; putative acyl carrier protein 1993264..1993500 Psychromonas ingrahamii 37 4623864 YP_943029.1 CDS Ping_1635 NC_008709.1 1993497 1993880 D YqjC Bacillus subtilis ortholog; KEGG: cac:CAC2192 lactoylglutathione lyase, YQJC B.subtilis ortholog; lactoylglutathione lyase 1993497..1993880 Psychromonas ingrahamii 37 4623865 YP_943030.1 CDS Ping_1636 NC_008709.1 1993884 1995356 D PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: gme:Gmet_2338 membrane bound O-acyl transferase, MBOAT; membrane bound O-acyl transferase, MBOAT family protein 1993884..1995356 Psychromonas ingrahamii 37 4623866 YP_943031.1 CDS Ping_1637 NC_008709.1 1995366 1996478 D KEGG: bca:BCE0977 hypothetical protein; hypothetical protein 1995366..1996478 Psychromonas ingrahamii 37 4623867 YP_943032.1 CDS Ping_1638 NC_008709.1 1996643 1997551 R PFAM: Integrase, catalytic region; KEGG: lpf:lpl1576 hypothetical protein; integrase catalytic subunit complement(1996643..1997551) Psychromonas ingrahamii 37 4623868 YP_943033.1 CDS Ping_1641 NC_008709.1 1998641 1998928 R PFAM: transposase IS3/IS911 family protein; KEGG: son:SOA0146 ISSod1, transposase OrfA; transposase IS3/IS911 family protein complement(1998641..1998928) Psychromonas ingrahamii 37 4623871 YP_943034.1 CDS Ping_1642 NC_008709.1 1999042 2000409 D PFAM: protein of unknown function DUF107; KEGG: vpa:VPA1105 putative membrane protein; membrane-bound serine protease 1999042..2000409 Psychromonas ingrahamii 37 4623872 YP_943035.1 CDS Ping_1643 NC_008709.1 2000451 2001221 D PFAM: band 7 protein; KEGG: vpa:VPA1106 putative stomatin-like protein; hypothetical protein 2000451..2001221 Psychromonas ingrahamii 37 4623873 YP_943036.1 CDS Ping_1644 NC_008709.1 2001581 2001874 D KEGG: vpa:VPA1207 hypothetical protein; hypothetical protein 2001581..2001874 Psychromonas ingrahamii 37 4623874 YP_943037.1 CDS Ping_1645 NC_008709.1 2001932 2003083 R PFAM: iron-containing alcohol dehydrogenase; KEGG: ppr:PBPRA2759 putative iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2001932..2003083) Psychromonas ingrahamii 37 4623875 YP_943038.1 CDS Ping_1646 NC_008709.1 2003503 2004132 R PFAM: phosphoribosyl-AMP cyclohydrolase; MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: ppr:PBPRA1085 putative phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase complement(2003503..2004132) Psychromonas ingrahamii 37 4623876 YP_943039.1 CDS Ping_1647 NC_008709.1 2004129 2004902 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(2004129..2004902) Psychromonas ingrahamii 37 4623622 YP_943040.1 CDS Ping_1648 NC_008709.1 2005868 2006323 D PFAM: protein of unknown function DUF411; KEGG: vfi:VF0780 CopG protein; hypothetical protein 2005868..2006323 Psychromonas ingrahamii 37 4623623 YP_943041.1 CDS Ping_1649 NC_008709.1 2006600 2006968 R KEGG: ilo:IL1220 hypothetical protein; hypothetical protein complement(2006600..2006968) Psychromonas ingrahamii 37 4626928 YP_943042.1 CDS Ping_1650 NC_008709.1 2007711 2008400 D KEGG: sil:SPO3275 hypothetical protein; hypothetical protein 2007711..2008400 Psychromonas ingrahamii 37 4626929 YP_943043.1 CDS Ping_1651 NC_008709.1 2008604 2009182 R hypothetical protein complement(2008604..2009182) Psychromonas ingrahamii 37 4626930 YP_943044.1 CDS Ping_1652 NC_008709.1 2009483 2010220 R TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; histidine biosynthesis; KEGG: vfi:VF1017 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(2009483..2010220) Psychromonas ingrahamii 37 4626931 YP_943045.1 CDS Ping_1653 NC_008709.1 2010222 2010824 R TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: vfi:VF1016 imidazole glycerol phosphate synthase subunit HisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(2010222..2010824) Psychromonas ingrahamii 37 4626932 YP_943046.1 CDS Ping_1654 NC_008709.1 2010821 2011891 R catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(2010821..2011891) Psychromonas ingrahamii 37 4626933 YP_943047.1 CDS Ping_1655 NC_008709.1 2011902 2012972 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(2011902..2012972) Psychromonas ingrahamii 37 4626934 YP_943048.1 CDS Ping_1656 NC_008709.1 2013100 2014407 R PFAM: histidinol dehydrogenase; KEGG: vpa:VP1138 histidinol dehydrogenase; histidinol dehydrogenase complement(2013100..2014407) Psychromonas ingrahamii 37 4626935 YP_943049.1 CDS hisG NC_008709.1 2014410 2015306 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(2014410..2015306) Psychromonas ingrahamii 37 4626936 YP_943050.1 CDS Ping_1658 NC_008709.1 2015576 2015806 R KEGG: vpa:VPA0978 hypothetical protein; hypothetical protein complement(2015576..2015806) Psychromonas ingrahamii 37 4626937 YP_943051.1 CDS Ping_1659 NC_008709.1 2016027 2016257 D KEGG: cps:CPS_0259 hypothetical protein; hypothetical protein 2016027..2016257 Psychromonas ingrahamii 37 4626938 YP_943052.1 CDS Ping_1660 NC_008709.1 2016409 2016966 R disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B complement(2016409..2016966) Psychromonas ingrahamii 37 4626909 YP_943053.1 CDS Ping_1661 NC_008709.1 2017293 2018003 D Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2017293..2018003 Psychromonas ingrahamii 37 4626910 YP_943054.1 CDS ftsK NC_008709.1 2018052 2020619 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: cps:CPS_2759 cell division protein FtsK; DNA segregation ATPase FtsK 2018052..2020619 Psychromonas ingrahamii 37 4626911 YP_943055.1 CDS Ping_1663 NC_008709.1 2020623 2021240 D PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: pmu:PM0256 outer membrane lipoproteins carrier protein; outer membrane lipoprotein carrier protein LolA 2020623..2021240 Psychromonas ingrahamii 37 4626912 YP_943056.1 CDS Ping_1664 NC_008709.1 2021240 2022568 D PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: ppr:PBPRA1164 putative ATPase protein; recombination factor protein RarA 2021240..2022568 Psychromonas ingrahamii 37 4626913 YP_943057.1 CDS crcB NC_008709.1 2022642 2023028 D TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: vpa:VP3028 CrcB protein; camphor resistance protein CrcB 2022642..2023028 Psychromonas ingrahamii 37 4626914 YP_943058.1 CDS Ping_1666 NC_008709.1 2023037 2024323 D KEGG: ppr:PBPRA1165 putative seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); seryl-tRNA synthetase, class IIa; seryl-tRNA synthetase 2023037..2024323 Psychromonas ingrahamii 37 4626915 YP_943059.1 CDS Ping_1667 NC_008709.1 2024800 2026155 R PFAM: major facilitator superfamily MFS_1; KEGG: vvy:VV2596 putative AmpG protein; major facilitator superfamily transporter complement(2024800..2026155) Psychromonas ingrahamii 37 4626916 YP_943060.1 CDS Ping_1668 NC_008709.1 2026283 2027392 R TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: vfi:VF1707 ribonuclease D; ribonuclease D complement(2026283..2027392) Psychromonas ingrahamii 37 4626917 YP_943061.1 CDS Ping_1669 NC_008709.1 2027837 2029234 D TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: lic:LIC11822 3-isopropylmalate dehydratase large subunit; 3-isopropylmalate dehydratase large subunit 2027837..2029234 Psychromonas ingrahamii 37 4626918 YP_943062.1 CDS Ping_1670 NC_008709.1 2029246 2029860 D KEGG: lic:LIC11821 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 2029246..2029860 Psychromonas ingrahamii 37 4626919 YP_943063.1 CDS Ping_1672 NC_008709.1 2030647 2031000 R hypothetical protein complement(2030647..2031000) Psychromonas ingrahamii 37 4626921 YP_943064.1 CDS Ping_1673 NC_008709.1 2031114 2032220 R PFAM: peptidase C1A, papain; KEGG: dre:368704 cathepsin C; peptidase C1A, papain complement(2031114..2032220) Psychromonas ingrahamii 37 4626922 YP_943065.1 CDS Ping_1674 NC_008709.1 2032324 2032677 R hypothetical protein complement(2032324..2032677) Psychromonas ingrahamii 37 4626923 YP_943066.1 CDS Ping_1675 NC_008709.1 2033203 2033652 D KEGG: cps:CPS_1176 hypothetical protein; hypothetical protein 2033203..2033652 Psychromonas ingrahamii 37 4626924 YP_943067.1 CDS Ping_1676 NC_008709.1 2034261 2034506 D hypothetical protein 2034261..2034506 Psychromonas ingrahamii 37 4626925 YP_943068.1 CDS Ping_1677 NC_008709.1 2035781 2036554 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: vfi:VF1780 ferredoxin--NADP reductase; ferredoxin--NADP(+) reductase 2035781..2036554 Psychromonas ingrahamii 37 4626926 YP_943069.1 CDS Ping_1678 NC_008709.1 2036939 2037541 R KEGG: cbu:CBU_0730 hypothetical protein; ABC transporter auxiliary component-like protein complement(2036939..2037541) Psychromonas ingrahamii 37 4626927 YP_943070.1 CDS Ping_1679 NC_008709.1 2037531 2038427 R PFAM: Mammalian cell entry related domain protein; KEGG: cje:Cj1648 putative ABC transport system substrate-bindin protein; hypothetical protein complement(2037531..2038427) Psychromonas ingrahamii 37 4627167 YP_943071.1 CDS Ping_1680 NC_008709.1 2038417 2039181 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS2022 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein complement(2038417..2039181) Psychromonas ingrahamii 37 4627168 YP_943072.1 CDS Ping_1681 NC_008709.1 2039178 2040329 R PFAM: protein of unknown function DUF140; KEGG: cje:Cj1646 putative ABC transport system permease protein; hypothetical protein complement(2039178..2040329) Psychromonas ingrahamii 37 4627169 YP_943073.1 CDS Ping_1682 NC_008709.1 2040927 2041874 R PFAM: conserved hypothetical protein 698; KEGG: ppr:PBPRB0970 hypothetical protein; hypothetical protein complement(2040927..2041874) Psychromonas ingrahamii 37 4627170 YP_943074.1 CDS Ping_1683 NC_008709.1 2042143 2042970 D KEGG: cps:CPS_3105 hypothetical protein; hypothetical protein 2042143..2042970 Psychromonas ingrahamii 37 4627171 YP_943075.1 CDS pfaA NC_008709.1 2043053 2051038 D PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; KEGG: cps:CPS_3104 polyunsaturated fatty acid synthase PfaA; polyunsaturated fatty acid synthase PfaA 2043053..2051038 Psychromonas ingrahamii 37 4627172 YP_943076.1 CDS Ping_1685 NC_008709.1 2051031 2053595 D KEGG: cps:CPS_3103 polyunsaturated fatty acid synthase PfaB; polyunsaturated fatty acid synthase PfaB 2051031..2053595 Psychromonas ingrahamii 37 4627173 YP_943077.1 CDS pfaC NC_008709.1 2053687 2059602 D PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: cps:CPS_3102 polyunsaturated fatty acid synthase PfaC; polyunsaturated fatty acid synthase PfaC 2053687..2059602 Psychromonas ingrahamii 37 4627174 YP_943078.1 CDS pfaD NC_008709.1 2059702 2061297 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cps:CPS_3099 polyunsaturated fatty acid synthase PfaD; polyunsaturated fatty acid synthase PfaD 2059702..2061297 Psychromonas ingrahamii 37 4627175 YP_943079.1 CDS Ping_1689 NC_008709.1 2062758 2063660 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_4691 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2062758..2063660) Psychromonas ingrahamii 37 4627177 YP_943080.1 CDS Ping_1690 NC_008709.1 2063840 2064664 D PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: rde:RD1_0073 hypothetical protein; glycolate oxidase-like protein 2063840..2064664 Psychromonas ingrahamii 37 4627178 YP_943081.1 CDS Ping_1691 NC_008709.1 2064654 2066093 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rde:RD1_0072 4Fe-4S binding domain protein, putative; 4Fe-4S ferredoxin 2064654..2066093 Psychromonas ingrahamii 37 4627179 YP_943082.1 CDS Ping_1692 NC_008709.1 2066097 2066780 D PFAM: protein of unknown function DUF162; KEGG: rde:RD1_0071 hypothetical protein; hypothetical protein 2066097..2066780 Psychromonas ingrahamii 37 4627180 YP_943083.1 CDS Ping_1694 NC_008709.1 2069522 2070232 R KEGG: cps:CPS_0257 hypothetical protein; hypothetical protein complement(2069522..2070232) Psychromonas ingrahamii 37 4627182 YP_943084.1 CDS Ping_1696 NC_008709.1 2071812 2072522 D hypothetical protein 2071812..2072522 Psychromonas ingrahamii 37 4626450 YP_943085.1 CDS Ping_1698 NC_008709.1 2072981 2073418 D KEGG: pfo:Pfl_5227 hypothetical protein; hypothetical protein 2072981..2073418 Psychromonas ingrahamii 37 4626452 YP_943086.1 CDS Ping_1699 NC_008709.1 2073841 2074791 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: pfl:PFL_3308 diguanylate cyclase, putative; bifunctional adenylate cyclase/hybrid sensor diguanylate cyclase/response regulator 2073841..2074791 Psychromonas ingrahamii 37 4626453 YP_943087.1 CDS Ping_1700 NC_008709.1 2074969 2075703 D KEGG: pha:PSHAa1466 hypothetical protein; accessory gene regulator 2074969..2075703 Psychromonas ingrahamii 37 4626454 YP_943088.1 CDS Ping_1701 NC_008709.1 2076151 2076783 D PFAM: 2OG-Fe(II) oxygenase; KEGG: cps:CPS_4217 oxidoreductase, 2OG-Fe(II) oxygenase family; 2OG-Fe(II) oxygenase 2076151..2076783 Psychromonas ingrahamii 37 4626455 YP_943089.1 CDS Ping_1702 NC_008709.1 2077076 2077975 R PFAM: ROK family protein; KEGG: vch:VC0270 ROK family protein; ROK family protein complement(2077076..2077975) Psychromonas ingrahamii 37 4626456 YP_943090.1 CDS Ping_1704 NC_008709.1 2078762 2079787 D PFAM: lipolytic enzyme, G-D-S-L family; KEGG: gme:Gmet_2594 lipolytic enzyme, G-D-S-L; G-D-S-L family lipolytic protein 2078762..2079787 Psychromonas ingrahamii 37 4626458 YP_943091.1 CDS Ping_1705 NC_008709.1 2080353 2080778 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pfo:Pfl_2241 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein complement(2080353..2080778) Psychromonas ingrahamii 37 4626459 YP_943092.1 CDS Ping_1706 NC_008709.1 2080952 2081749 R PFAM: protein of unknown function DUF81; KEGG: cps:CPS_2461 putative membrane protein; hypothetical protein complement(2080952..2081749) Psychromonas ingrahamii 37 4626460 YP_943093.1 CDS Ping_1707 NC_008709.1 2081990 2082208 R KEGG: hch:HCH_04258 hypothetical protein; hypothetical protein complement(2081990..2082208) Psychromonas ingrahamii 37 4626461 YP_943094.1 CDS Ping_1708 NC_008709.1 2082427 2082990 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMa0279 hypothetical protein; type 11 methyltransferase 2082427..2082990 Psychromonas ingrahamii 37 4626462 YP_943095.1 CDS Ping_1710 NC_008709.1 2083914 2084492 D hypothetical protein 2083914..2084492 Psychromonas ingrahamii 37 4626464 YP_943096.1 CDS Ping_1711 NC_008709.1 2084646 2084960 D KEGG: cps:CPS_2170 hypothetical protein; hypothetical protein 2084646..2084960 Psychromonas ingrahamii 37 4626465 YP_943097.1 CDS Ping_1712 NC_008709.1 2085233 2085766 R PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO3857 PAP2 family protein; PA-phosphatase-like phosphoesterase complement(2085233..2085766) Psychromonas ingrahamii 37 4626466 YP_943098.1 CDS Ping_1713 NC_008709.1 2086256 2086624 R PFAM: diacylglycerol kinase; KEGG: sat:SYN_02353 putative diacylglycerolkinase; diacylglycerol kinase complement(2086256..2086624) Psychromonas ingrahamii 37 4626467 YP_943099.1 CDS Ping_1714 NC_008709.1 2087747 2088097 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ppr:PBPRB1064 hypothetical protein; antibiotic biosynthesis monooxygenase 2087747..2088097 Psychromonas ingrahamii 37 4626468 YP_943100.1 CDS Ping_1715 NC_008709.1 2088784 2089182 R hypothetical protein complement(2088784..2089182) Psychromonas ingrahamii 37 4627092 YP_943101.1 CDS Ping_1716 NC_008709.1 2089413 2090309 D PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: eca:ECA0923 hypothetical protein; NmrA family protein 2089413..2090309 Psychromonas ingrahamii 37 4627093 YP_943102.1 CDS Ping_1717 NC_008709.1 2091028 2092815 D PFAM: LGFP repeat protein; KEGG: nfa:pnf1740 hypothetical protein; LGFP repeat-containing protein 2091028..2092815 Psychromonas ingrahamii 37 4627094 YP_943103.1 CDS Ping_1718 NC_008709.1 2093130 2094395 D KEGG: vfi:VFA1062 transporter, NRAMP family; transporter protein 2093130..2094395 Psychromonas ingrahamii 37 4627095 YP_943104.1 CDS Ping_1719 NC_008709.1 2094681 2094920 D SMART: zinc finger, CDGSH-type domain protein; KEGG: cps:CPS_2171 hypothetical protein; zinc finger CDGSH-type domain-containing protein 2094681..2094920 Psychromonas ingrahamii 37 4627096 YP_943105.1 CDS Ping_1720 NC_008709.1 2095039 2095383 D KEGG: sde:Sde_0294 putative transcriptional regulator, fis family; putative transcriptional regulator, fis family protein 2095039..2095383 Psychromonas ingrahamii 37 4627097 YP_943106.1 CDS Ping_1721 NC_008709.1 2095488 2095700 D KEGG: sdn:Sden_1261 hypothetical protein; hypothetical protein 2095488..2095700 Psychromonas ingrahamii 37 4627098 YP_943107.1 CDS Ping_1722 NC_008709.1 2095975 2096853 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: cps:CPS_4235 membrane protein; hypothetical protein 2095975..2096853 Psychromonas ingrahamii 37 4627099 YP_943108.1 CDS Ping_1723 NC_008709.1 2096969 2098993 R KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(2096969..2098993) Psychromonas ingrahamii 37 4627100 YP_943109.1 CDS Ping_1726 NC_008709.1 2101442 2102788 R KEGG: pae:PA2843 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; 2-dehydro-3-deoxyphosphoheptonate aldolase complement(2101442..2102788) Psychromonas ingrahamii 37 4627103 YP_943110.1 CDS Ping_1727 NC_008709.1 2103003 2103296 D hypothetical protein 2103003..2103296 Psychromonas ingrahamii 37 4627104 YP_943111.1 CDS Ping_1728 NC_008709.1 2103506 2103856 D KEGG: son:SO0822 outer membrane efflux family protein; outer membrane efflux family protein 2103506..2103856 Psychromonas ingrahamii 37 4627105 YP_943112.1 CDS Ping_1729 NC_008709.1 2104362 2105009 D PFAM: isochorismatase hydrolase; KEGG: bbr:BB1959 putative nicotinamidase; isochorismatase hydrolase 2104362..2105009 Psychromonas ingrahamii 37 4627106 YP_943113.1 CDS Ping_1730 NC_008709.1 2105006 2106226 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2105006..2106226 Psychromonas ingrahamii 37 4627107 YP_943114.1 CDS Ping_1731 NC_008709.1 2106469 2107065 D PFAM: transferase hexapeptide repeat containing protein; KEGG: vvy:VVA0614 acetyltransferase; galactoside O-acetyltransferase 2106469..2107065 Psychromonas ingrahamii 37 4627108 YP_943115.1 CDS Ping_1732 NC_008709.1 2107207 2108274 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; KEGG: mbu:Mbur_0646 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 2107207..2108274 Psychromonas ingrahamii 37 4626697 YP_943116.1 CDS Ping_1733 NC_008709.1 2108551 2111094 R PFAM: amino acid permease-associated region; KEGG: sru:SRU_2259 Na-K-Cl cotransporter, putative; amino acid permease-associated protein complement(2108551..2111094) Psychromonas ingrahamii 37 4626698 YP_943117.1 CDS Ping_1734 NC_008709.1 2111603 2112679 D PFAM: MscS Mechanosensitive ion channel; KEGG: pat:Patl_3399 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2111603..2112679 Psychromonas ingrahamii 37 4626699 YP_943118.1 CDS Ping_1735 NC_008709.1 2112951 2113478 D KEGG: ppr:PBPRB1261 hypothetical protein; hypothetical protein 2112951..2113478 Psychromonas ingrahamii 37 4626700 YP_943119.1 CDS Ping_1736 NC_008709.1 2113734 2114663 D PFAM: protein of unknown function DUF399; KEGG: vfi:VFA0756 putative lipoprotein; hypothetical protein 2113734..2114663 Psychromonas ingrahamii 37 4626701 YP_943120.1 CDS Ping_1737 NC_008709.1 2115413 2116195 R KEGG: pat:Patl_2035 putative cytochrome c oxidase, subunit I; putative cytochrome c oxidase subunit I complement(2115413..2116195) Psychromonas ingrahamii 37 4626702 YP_943121.1 CDS fumC NC_008709.1 2116645 2118015 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2116645..2118015 Psychromonas ingrahamii 37 4626703 YP_943122.1 CDS Ping_1739 NC_008709.1 2117981 2118235 R hypothetical protein complement(2117981..2118235) Psychromonas ingrahamii 37 4626704 YP_943123.1 CDS Ping_1740 NC_008709.1 2118473 2119960 D KEGG: hch:HCH_00352 hypothetical protein; hypothetical protein 2118473..2119960 Psychromonas ingrahamii 37 4626705 YP_943124.1 CDS Ping_1741 NC_008709.1 2119957 2120994 D KEGG: hch:HCH_00351 hypothetical protein; hypothetical protein 2119957..2120994 Psychromonas ingrahamii 37 4626706 YP_943125.1 CDS Ping_1742 NC_008709.1 2121097 2121750 R PFAM: Glutathione S-transferase, C-terminal domain; KEGG: ppr:PBPRA1656 putative glutathione S-transferase; glutathione S-transferase complement(2121097..2121750) Psychromonas ingrahamii 37 4626707 YP_943126.1 CDS Ping_1743 NC_008709.1 2122039 2122533 D KEGG: ppr:PBPRB1424 hypothetical protein; hypothetical protein 2122039..2122533 Psychromonas ingrahamii 37 4626708 YP_943127.1 CDS Ping_1744 NC_008709.1 2122690 2124405 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(2122690..2124405) Psychromonas ingrahamii 37 4626709 YP_943128.1 CDS Ping_1745 NC_008709.1 2126548 2127954 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: bba:Bd1513 regulator protein PilR; Fis family two component sigma-54 specific transcriptional regulator protein 2126548..2127954 Psychromonas ingrahamii 37 4626710 YP_943129.1 CDS Ping_1746 NC_008709.1 2128141 2129661 D KEGG: mxa:MXAN_6865 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; sensor histidine kinase PAS domain-containing protein 2128141..2129661 Psychromonas ingrahamii 37 4626711 YP_943130.1 CDS Ping_1747 NC_008709.1 2129658 2130050 D PFAM: response regulator receiver; KEGG: det:DET1294 DNA-binding response regulator; response regulator receiver protein 2129658..2130050 Psychromonas ingrahamii 37 4626712 YP_943131.1 CDS Ping_1748 NC_008709.1 2130458 2130676 D involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins; gas vesicle synthesis protein GvpA 2130458..2130676 Psychromonas ingrahamii 37 4626713 YP_943132.1 CDS Ping_1749 NC_008709.1 2130824 2132176 D KEGG: hsa:26064 retinoic acid induced 14; ATP synthase subunit AtpF 2130824..2132176 Psychromonas ingrahamii 37 4626714 YP_943133.1 CDS Ping_1750 NC_008709.1 2132246 2133253 D KEGG: cya:CYA_0826 gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; gas vesicle protein GvpN 2132246..2133253 Psychromonas ingrahamii 37 4626715 YP_943134.1 CDS Ping_1751 NC_008709.1 2133278 2133598 D hypothetical protein 2133278..2133598 Psychromonas ingrahamii 37 4623956 YP_943135.1 CDS Ping_1752 NC_008709.1 2133709 2133984 D hypothetical protein 2133709..2133984 Psychromonas ingrahamii 37 4623957 YP_943136.1 CDS Ping_1753 NC_008709.1 2134466 2135089 D KEGG: noc:Noc_0459 hypothetical protein; hypothetical protein 2134466..2135089 Psychromonas ingrahamii 37 4623958 YP_943137.1 CDS Ping_1754 NC_008709.1 2135299 2135553 R KEGG: ppr:PBPRB1414 hypothetical protein; hypothetical protein complement(2135299..2135553) Psychromonas ingrahamii 37 4623959 YP_943138.1 CDS Ping_1756 NC_008709.1 2136031 2139156 R PFAM: acriflavin resistance protein; KEGG: sdn:Sden_2206 acriflavin resistance protein; acriflavin resistance protein complement(2136031..2139156) Psychromonas ingrahamii 37 4623961 YP_943139.1 CDS Ping_1757 NC_008709.1 2139153 2140484 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sdn:Sden_2205 membrane-fusion protein; RND family efflux transporter MFP subunit complement(2139153..2140484) Psychromonas ingrahamii 37 4623962 YP_943140.1 CDS Ping_1758 NC_008709.1 2140471 2141133 R PFAM: regulatory protein, TetR; KEGG: sdn:Sden_2204 regulatory protein, TetR; TetR family transcriptional regulator complement(2140471..2141133) Psychromonas ingrahamii 37 4623963 YP_943141.1 CDS Ping_1759 NC_008709.1 2141676 2141987 R hypothetical protein complement(2141676..2141987) Psychromonas ingrahamii 37 4623964 YP_943142.1 CDS Ping_1760 NC_008709.1 2142060 2142584 R TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: son:SO0627 putative 2'-5' RNA ligase; 2'-5' RNA ligase complement(2142060..2142584) Psychromonas ingrahamii 37 4623965 YP_943143.1 CDS Ping_1761 NC_008709.1 2142961 2143344 D hypothetical protein 2142961..2143344 Psychromonas ingrahamii 37 4623966 YP_943144.1 CDS Ping_1762 NC_008709.1 2143856 2144125 D KEGG: csa:Csal_1578 hypothetical protein; hypothetical protein 2143856..2144125 Psychromonas ingrahamii 37 4623967 YP_943145.1 CDS Ping_1763 NC_008709.1 2144881 2145249 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3403 ribosomal subunit interface protein; sigma 54 modulation protein/ribosomal protein S30EA complement(2144881..2145249) Psychromonas ingrahamii 37 4623968 YP_943146.1 CDS Ping_1764 NC_008709.1 2145860 2146762 D KEGG: noc:Noc_1323 hypothetical protein; Na+/H+ antiporter 2145860..2146762 Psychromonas ingrahamii 37 4623969 YP_943147.1 CDS Ping_1765 NC_008709.1 2146978 2147427 D KEGG: ppr:PBPRB0493 hypothetical protein; hypothetical protein 2146978..2147427 Psychromonas ingrahamii 37 4623970 YP_943148.1 CDS Ping_1766 NC_008709.1 2147617 2147883 D hypothetical protein 2147617..2147883 Psychromonas ingrahamii 37 4623971 YP_943149.1 CDS Ping_1767 NC_008709.1 2148515 2148799 D hypothetical protein 2148515..2148799 Psychromonas ingrahamii 37 4623972 YP_943150.1 CDS Ping_1768 NC_008709.1 2149071 2150561 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component; ABC transporter complex for phosphonate inner membrane binding subunit complement(2149071..2150561) Psychromonas ingrahamii 37 4623973 YP_943151.1 CDS Ping_1769 NC_008709.1 2150631 2151308 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sdn:Sden_1898 ABC transporter related; phosphonate ABC transporter ATP-binding protein complement(2150631..2151308) Psychromonas ingrahamii 37 4623974 YP_943152.1 CDS Ping_1770 NC_008709.1 2151308 2152162 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: sdn:Sden_1899 phosphonate-binding periplasmic protein; ABC phosphonate transporter periplasmic phosphonate-binding protein complement(2151308..2152162) Psychromonas ingrahamii 37 4626103 YP_943153.1 CDS Ping_1771 NC_008709.1 2152573 2153688 D KEGG: plu:plu0955 D-erythrose 4-phosphate dehydrogenase; TIGRFAM: D-erythrose-4-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; D-erythrose-4-phosphate dehydrogenase 2152573..2153688 Psychromonas ingrahamii 37 4626104 YP_943154.1 CDS Ping_1772 NC_008709.1 2153824 2155260 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: ppr:PBPRA1551 hypothetical nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 2153824..2155260 Psychromonas ingrahamii 37 4626105 YP_943155.1 CDS Ping_1773 NC_008709.1 2155557 2155940 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pha:PSHAa2023 RlpA-like lipoprotein precursor; rare lipoprotein A 2155557..2155940 Psychromonas ingrahamii 37 4626106 YP_943156.1 CDS Ping_1774 NC_008709.1 2155963 2156448 R SMART: Water Stress and Hypersensitive response; KEGG: psb:Psyr_3032 lipoprotein, putative; water stress/hypersensitive response protein complement(2155963..2156448) Psychromonas ingrahamii 37 4626107 YP_943157.1 CDS Ping_1776 NC_008709.1 2158536 2159573 D KEGG: pol:Bpro_3282 hypothetical protein; hypothetical protein 2158536..2159573 Psychromonas ingrahamii 37 4626109 YP_943158.1 CDS Ping_1777 NC_008709.1 2159928 2161187 R catalyzes the removal of amino acids from the N termini of peptides; putative aminopeptidase 2 complement(2159928..2161187) Psychromonas ingrahamii 37 4626110 YP_943159.1 CDS Ping_1778 NC_008709.1 2162060 2162455 D KEGG: sru:SRU_0144 putative redox sensing protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 2162060..2162455 Psychromonas ingrahamii 37 4626111 YP_943160.1 CDS Ping_1779 NC_008709.1 2163161 2164054 D KEGG: pat:Patl_0276 esterase/lipase/thioesterase family protein; esterase/lipase/thioesterase family protein 2163161..2164054 Psychromonas ingrahamii 37 4626112 YP_943161.1 CDS Ping_1782 NC_008709.1 2165717 2167396 D KEGG: sma:SAV4164 hypothetical protein; gamma-D-glutamate-meso-diaminopimelate muropeptidase 2165717..2167396 Psychromonas ingrahamii 37 4626115 YP_943162.1 CDS Ping_1783 NC_008709.1 2167565 2168029 R hypothetical protein complement(2167565..2168029) Psychromonas ingrahamii 37 4626116 YP_943163.1 CDS Ping_1784 NC_008709.1 2169096 2169782 D hypothetical protein 2169096..2169782 Psychromonas ingrahamii 37 4626066 YP_943164.1 CDS Ping_1785 NC_008709.1 2170101 2170736 R PFAM: SOUL heme-binding protein; KEGG: pcr:Pcryo_1702 SOUL heme-binding protein; SOUL heme-binding protein complement(2170101..2170736) Psychromonas ingrahamii 37 4626067 YP_943165.1 CDS Ping_1786 NC_008709.1 2171173 2172177 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: rde:RD1_0794 cytochrome oxidase, subunit II, putative; cytochrome bd-type quinol oxidase subunit 2 complement(2171173..2172177) Psychromonas ingrahamii 37 4626068 YP_943166.1 CDS Ping_1787 NC_008709.1 2172167 2173612 R PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: rde:RD1_0793 cytochrome oxidase subunit II, putative; cytochrome bd ubiquinol oxidase subunit I complement(2172167..2173612) Psychromonas ingrahamii 37 4626069 YP_943167.1 CDS Ping_1788 NC_008709.1 2173777 2174028 R KEGG: vch:VCA0343 hypothetical protein; hypothetical protein complement(2173777..2174028) Psychromonas ingrahamii 37 4626070 YP_943168.1 CDS Ping_1790 NC_008709.1 2175056 2175586 R PFAM: regulatory protein, TetR; KEGG: pat:Patl_4127 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2175056..2175586) Psychromonas ingrahamii 37 4626072 YP_943169.1 CDS Ping_1791 NC_008709.1 2175785 2176900 R PFAM: amine oxidase; KEGG: pha:PSHAa1280 hypothetical protein; amine oxidase complement(2175785..2176900) Psychromonas ingrahamii 37 4626073 YP_943170.1 CDS Ping_1792 NC_008709.1 2177132 2177749 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: pat:Patl_4128 glutathione S-transferase-like; glutathione S-transferase 2177132..2177749 Psychromonas ingrahamii 37 4626074 YP_943171.1 CDS Ping_1793 NC_008709.1 2177830 2178522 D KEGG: pha:PSHAb0211 hypothetical protein; transcriptional regulator 2177830..2178522 Psychromonas ingrahamii 37 4626075 YP_943172.1 CDS Ping_1794 NC_008709.1 2179387 2180646 D PFAM: glycosyl transferase, group 1; KEGG: cps:CPS_0439 hypothetical protein; group 1 glycosyl transferase 2179387..2180646 Psychromonas ingrahamii 37 4626076 YP_943173.1 CDS Ping_1795 NC_008709.1 2180713 2180931 D KEGG: sdn:Sden_3720 transposase, mutator type; hypothetical protein 2180713..2180931 Psychromonas ingrahamii 37 4626077 YP_943174.1 CDS Ping_1796 NC_008709.1 2181466 2182653 D Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein 2181466..2182653 Psychromonas ingrahamii 37 4626078 YP_943175.1 CDS Ping_1798 NC_008709.1 2182979 2183422 R PFAM: protein of unknown function DUF1499; KEGG: noc:Noc_0976 protein of unknown function DUF1499; hypothetical protein complement(2182979..2183422) Psychromonas ingrahamii 37 4626080 YP_943176.1 CDS Ping_1800 NC_008709.1 2184209 2185000 D PFAM: peptidase M48, Ste24p; KEGG: ppr:PBPRB0661 hypothetical protein; peptidase M48, Ste24p 2184209..2185000 Psychromonas ingrahamii 37 4626082 YP_943177.1 CDS Ping_1801 NC_008709.1 2185084 2185698 R KEGG: ppr:PBPRA1013 hypothetical protein; hypothetical protein complement(2185084..2185698) Psychromonas ingrahamii 37 4626083 YP_943178.1 CDS Ping_1802 NC_008709.1 2186177 2188318 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cps:CPS_0986 major facilitator family transporter; major facilitator superfamily transporter 2186177..2188318 Psychromonas ingrahamii 37 4626084 YP_943179.1 CDS Ping_1803 NC_008709.1 2188379 2189107 D PFAM: protein of unknown function DUF81; KEGG: vfi:VF1119 hypothetical protein; hypothetical protein 2188379..2189107 Psychromonas ingrahamii 37 4626156 YP_943180.1 CDS Ping_1804 NC_008709.1 2189729 2190619 D PFAM: protein of unknown function DUF6, transmembrane; Protein of unknown function DUF250; KEGG: pha:PSHAa0632 inner membrane protein; hypothetical protein 2189729..2190619 Psychromonas ingrahamii 37 4626157 YP_943181.1 CDS Ping_1805 NC_008709.1 2190780 2191517 D PFAM: dienelactone hydrolase; KEGG: hch:HCH_02826 dienelactone hydrolase and related enzyme; dienelactone hydrolase 2190780..2191517 Psychromonas ingrahamii 37 4626158 YP_943182.1 CDS Ping_1806 NC_008709.1 2191724 2192143 R PFAM: heat shock protein Hsp20; KEGG: ayw:AYWB_017 molecular chaperone; heat shock protein Hsp20 complement(2191724..2192143) Psychromonas ingrahamii 37 4626159 YP_943183.1 CDS Ping_1807 NC_008709.1 2192473 2193774 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cps:CPS_1590 ATP-dependent RNA helicase, DEAD box family; ATP-dependent RNA helicase complement(2192473..2193774) Psychromonas ingrahamii 37 4626160 YP_943184.1 CDS Ping_1808 NC_008709.1 2194062 2194637 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cte:CT0994 cytidine and deoxycytidylate deaminase family protein; zinc-binding CMP/dCMP deaminase 2194062..2194637 Psychromonas ingrahamii 37 4626161 YP_943185.1 CDS Ping_1809 NC_008709.1 2194960 2195934 R PFAM: oxidoreductase domain protein; KEGG: yps:YPTB3473 possible MocA-family oxidoreductase; oxidoreductase domain-containing protein complement(2194960..2195934) Psychromonas ingrahamii 37 4626162 YP_943186.1 CDS Ping_1810 NC_008709.1 2196030 2198216 D PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: vch:VC2716 hypothetical protein; RNA-binding S1 domain-containing protein 2196030..2198216 Psychromonas ingrahamii 37 4626163 YP_943187.1 CDS Ping_1811 NC_008709.1 2198225 2198932 D KEGG: vfi:VFA0955 hypothetical protein; S-adenosylmethionine-dependent methyltransferase 2198225..2198932 Psychromonas ingrahamii 37 4626164 YP_943188.1 CDS Ping_1812 NC_008709.1 2198957 2199574 D PFAM: NUDIX hydrolase; KEGG: ppr:PBPRB0617 putative MutT/NUDIX family protein; nucleotide phosphate derivative pyrophosphohydrolase 2198957..2199574 Psychromonas ingrahamii 37 4626165 YP_943189.1 CDS Ping_1813 NC_008709.1 2199596 2200258 R KEGG: ppr:PBPRA1549 hypothetical protein; hypothetical protein complement(2199596..2200258) Psychromonas ingrahamii 37 4626166 YP_943190.1 CDS Ping_1814 NC_008709.1 2200715 2201515 D PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: rpd:RPD_2762 ion transport 2; Ion transport 2 domain-containing protein 2200715..2201515 Psychromonas ingrahamii 37 4626167 YP_943191.1 CDS Ping_1815 NC_008709.1 2201743 2202750 D PFAM: Integrase, catalytic region; KEGG: plu:plu3016 transposase, IS30 family; integrase catalytic subunit 2201743..2202750 Psychromonas ingrahamii 37 4626168 YP_943192.1 CDS Ping_1816 NC_008709.1 2202843 2203784 R PFAM: metallophosphoesterase; KEGG: noc:Noc_0403 metallophosphoesterase; metallophosphoesterase complement(2202843..2203784) Psychromonas ingrahamii 37 4626169 YP_943193.1 CDS Ping_1817 NC_008709.1 2204719 2205327 D hypothetical protein 2204719..2205327 Psychromonas ingrahamii 37 4626170 YP_943194.1 CDS Ping_1818 NC_008709.1 2205327 2205674 D hypothetical protein 2205327..2205674 Psychromonas ingrahamii 37 4626171 YP_943195.1 CDS Ping_1819 NC_008709.1 2206882 2208210 D TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: sat:SYN_02541 membrane spanning protein ribonuclease BN-like family; putative ribonuclease BN 2206882..2208210 Psychromonas ingrahamii 37 4626172 YP_943196.1 CDS Ping_1820 NC_008709.1 2208423 2209184 R KEGG: neu:NE2041 hypothetical protein; hypothetical protein complement(2208423..2209184) Psychromonas ingrahamii 37 4626173 YP_943197.1 CDS Ping_1821 NC_008709.1 2209599 2210495 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: lic:LIC11128 GGDEF family protein; diguanylate cyclase complement(2209599..2210495) Psychromonas ingrahamii 37 4626174 YP_943198.1 CDS Ping_1822 NC_008709.1 2210500 2211303 R PFAM: alpha/beta hydrolase fold; KEGG: bsu:BG12442 similar to hydrolase; alpha/beta hydrolase fold protein complement(2210500..2211303) Psychromonas ingrahamii 37 4626117 YP_943199.1 CDS Ping_1823 NC_008709.1 2212134 2212616 D KEGG: pat:Patl_3555 hypothetical protein; hypothetical protein 2212134..2212616 Psychromonas ingrahamii 37 4626118 YP_943200.1 CDS Ping_1824 NC_008709.1 2212613 2213155 D KEGG: pat:Patl_3554 hypothetical protein; hypothetical protein 2212613..2213155 Psychromonas ingrahamii 37 4626119 YP_943201.1 CDS Ping_1825 NC_008709.1 2213678 2214586 D PFAM: sulfotransferase; KEGG: noc:Noc_0082 sulfotransferase; sulfotransferase 2213678..2214586 Psychromonas ingrahamii 37 4626120 YP_943202.1 CDS Ping_1826 NC_008709.1 2215108 2215437 D PFAM: small multidrug resistance protein; KEGG: pat:Patl_0437 small multidrug resistance protein; small multidrug resistance protein 2215108..2215437 Psychromonas ingrahamii 37 4626121 YP_943203.1 CDS Ping_1827 NC_008709.1 2215576 2216496 R catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase complement(2215576..2216496) Psychromonas ingrahamii 37 4626122 YP_943204.1 CDS Ping_1828 NC_008709.1 2217033 2218025 D PFAM: permease; KEGG: cps:CPS_3357 putative permease; permease 2217033..2218025 Psychromonas ingrahamii 37 4626123 YP_943205.1 CDS Ping_1829 NC_008709.1 2218037 2218273 D KEGG: reu:Reut_B4599 thiol-disulfide isomerase and thioredoxins; thiol-disulfide isomerase and thioredoxins 2218037..2218273 Psychromonas ingrahamii 37 4626124 YP_943206.1 CDS Ping_1830 NC_008709.1 2218707 2220005 D PFAM: cytochrome c, class I; KEGG: gox:GOX0585 cytochrome c subunit of aldehyde dehydrogenase; cytochrome c, class I 2218707..2220005 Psychromonas ingrahamii 37 4626125 YP_943207.1 CDS Ping_1831 NC_008709.1 2220025 2220492 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gox:GOX0586 membrane-bound aldehyde dehydrogenase, small subunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2220025..2220492 Psychromonas ingrahamii 37 4626126 YP_943208.1 CDS Ping_1832 NC_008709.1 2220489 2222792 D PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: gox:GOX0587 membrane-bound aldehyde dehydrogenase, large subunit; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 2220489..2222792 Psychromonas ingrahamii 37 4626127 YP_943209.1 CDS Ping_1833 NC_008709.1 2223076 2223807 R KEGG: sdn:Sden_2225 hypothetical protein; isoquinoline 1-oxidoreductase maturation factor complement(2223076..2223807) Psychromonas ingrahamii 37 4626128 YP_943210.1 CDS Ping_1834 NC_008709.1 2223850 2224842 R PFAM: protein of unknown function DUF182; KEGG: son:SO3051 hypothetical xanthine dehydrogenase accessory factor; isoquinoline 1-oxidoreductase maturation factor complement(2223850..2224842) Psychromonas ingrahamii 37 4626129 YP_943211.1 CDS Ping_1835 NC_008709.1 2225555 2227519 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-3 domain protein; KEGG: tbd:Tbd_1411 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain; PAS/PAC sensor-containing diguanylate cyclase complement(2225555..2227519) Psychromonas ingrahamii 37 4626130 YP_943212.1 CDS Ping_1836 NC_008709.1 2228522 2229076 D hypothetical protein 2228522..2229076 Psychromonas ingrahamii 37 4626131 YP_943213.1 CDS Ping_1837 NC_008709.1 2229316 2230425 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dps:DP1302 similar to NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2229316..2230425 Psychromonas ingrahamii 37 4626132 YP_943214.1 CDS Ping_1838 NC_008709.1 2230483 2230839 D hypothetical protein 2230483..2230839 Psychromonas ingrahamii 37 4626133 YP_943215.1 CDS Ping_1839 NC_008709.1 2230976 2233267 R KEGG: eba:ebA2147 conserved hypothetical protein, contains PAS domains; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(2230976..2233267) Psychromonas ingrahamii 37 4626134 YP_943216.1 CDS Ping_1840 NC_008709.1 2233264 2235786 R PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; KEGG: dar:Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase complement(2233264..2235786) Psychromonas ingrahamii 37 4626135 YP_943217.1 CDS Ping_1841 NC_008709.1 2237056 2238852 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase 2237056..2238852 Psychromonas ingrahamii 37 4626136 YP_943218.1 CDS Ping_1842 NC_008709.1 2239239 2239613 R hypothetical protein complement(2239239..2239613) Psychromonas ingrahamii 37 4625029 YP_943219.1 CDS Ping_1843 NC_008709.1 2239944 2240966 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: hch:HCH_00510 arsenite efflux pump ACR3 and related permease; arsenical-resistance protein complement(2239944..2240966) Psychromonas ingrahamii 37 4625030 YP_943220.1 CDS Ping_1844 NC_008709.1 2241279 2242154 R PFAM: Patatin; KEGG: cps:CPS_2826 patatin-like phospholipase family protein; patatin-like protein of phospholipase family protein complement(2241279..2242154) Psychromonas ingrahamii 37 4625031 YP_943221.1 CDS Ping_1845 NC_008709.1 2242427 2242978 D PFAM: protein of unknown function DUF1415; KEGG: ilo:IL2495 hypothetical protein; hypothetical protein 2242427..2242978 Psychromonas ingrahamii 37 4625032 YP_943222.1 CDS Ping_1846 NC_008709.1 2243243 2247046 D PFAM: SMC domain protein; KEGG: cps:CPS_2616 hypothetical protein; SMC domain-containing protein 2243243..2247046 Psychromonas ingrahamii 37 4625033 YP_943223.1 CDS Ping_1847 NC_008709.1 2247046 2247669 D KEGG: cps:CPS_2617 hypothetical protein; hypothetical protein 2247046..2247669 Psychromonas ingrahamii 37 4625034 YP_943224.1 CDS Ping_1848 NC_008709.1 2247669 2248910 D KEGG: cps:CPS_2618 hypothetical protein; hypothetical protein 2247669..2248910 Psychromonas ingrahamii 37 4625035 YP_943225.1 CDS Ping_1849 NC_008709.1 2249102 2249602 D KEGG: hch:HCH_06401 hypothetical protein; hypothetical protein 2249102..2249602 Psychromonas ingrahamii 37 4625036 YP_943226.1 CDS Ping_1850 NC_008709.1 2249749 2250579 D hypothetical protein 2249749..2250579 Psychromonas ingrahamii 37 4625037 YP_943227.1 CDS Ping_1851 NC_008709.1 2250727 2251233 D KEGG: pat:Patl_2982 hypothetical protein; hypothetical protein 2250727..2251233 Psychromonas ingrahamii 37 4625038 YP_943228.1 CDS Ping_1852 NC_008709.1 2251491 2252684 D catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 2251491..2252684 Psychromonas ingrahamii 37 4625039 YP_943229.1 CDS tdh NC_008709.1 2252697 2253731 D converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 2252697..2253731 Psychromonas ingrahamii 37 4625040 YP_943230.1 CDS Ping_1854 NC_008709.1 2253769 2254635 D KEGG: vvu:VV12187 hypothetical protein; hypothetical protein 2253769..2254635 Psychromonas ingrahamii 37 4625237 YP_943231.1 CDS Ping_1855 NC_008709.1 2254659 2255207 D hypothetical protein 2254659..2255207 Psychromonas ingrahamii 37 4625238 YP_943232.1 CDS Ping_1856 NC_008709.1 2255254 2255733 D PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: pha:PSHAa0292 peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 2255254..2255733 Psychromonas ingrahamii 37 4625239 YP_943233.1 CDS Ping_1857 NC_008709.1 2255913 2258342 D Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 2255913..2258342 Psychromonas ingrahamii 37 4625240 YP_943234.1 CDS Ping_1858 NC_008709.1 2258662 2258853 D KEGG: sde:Sde_1490 hypothetical protein; hypothetical protein 2258662..2258853 Psychromonas ingrahamii 37 4625241 YP_943235.1 CDS Ping_1859 NC_008709.1 2258974 2259825 R PFAM: Thioredoxin domain; KEGG: eca:ECA1220 putative thioredoxin; thioredoxin domain-containing protein complement(2258974..2259825) Psychromonas ingrahamii 37 4625242 YP_943236.1 CDS Ping_1860 NC_008709.1 2260001 2260882 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: ppr:PBPRA2898 putative dihydrodipicolinate synthase; dihydrodipicolinate synthase 2260001..2260882 Psychromonas ingrahamii 37 4625243 YP_943237.1 CDS Ping_1861 NC_008709.1 2260879 2262003 D PFAM: NlpBDapX family lipoprotein; KEGG: son:SO1880 lipoprotein-34 NlpB; NlpB/DapX family lipoprotein 2260879..2262003 Psychromonas ingrahamii 37 4625244 YP_943238.1 CDS Ping_1862 NC_008709.1 2262408 2263511 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(2262408..2263511) Psychromonas ingrahamii 37 4625245 YP_943239.1 CDS Ping_1864 NC_008709.1 2265432 2266124 D PFAM: response regulator receiver; KEGG: vvy:VV1604 response regulator of citrate/malate metabolism; fused response regulator receiver/hypothetical protein 2265432..2266124 Psychromonas ingrahamii 37 4625247 YP_943240.1 CDS Ping_1865 NC_008709.1 2266177 2268063 R PFAM: AMP-dependent synthetase and ligase; KEGG: ppr:PBPRB0238 putative Acyl-coenzyme A synthetase;AMP-(fatty) acid ligase; AMP-dependent synthetase and ligase complement(2266177..2268063) Psychromonas ingrahamii 37 4625248 YP_943241.1 CDS Ping_1866 NC_008709.1 2268098 2269291 R TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: sdn:Sden_1667 PrpF, AcnD-accessory; putative AcnD-accessory protein PrpF complement(2268098..2269291) Psychromonas ingrahamii 37 4625249 YP_943242.1 CDS Ping_1867 NC_008709.1 2269294 2271900 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(2269294..2271900) Psychromonas ingrahamii 37 4625250 YP_943243.1 CDS Ping_1868 NC_008709.1 2271922 2273052 R KEGG: cps:CPS_2821 putative 2-methylcitrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; 2-methylcitrate synthase/citrate synthase II complement(2271922..2273052) Psychromonas ingrahamii 37 4625251 YP_943244.1 CDS prpB NC_008709.1 2273111 2273989 R catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase complement(2273111..2273989) Psychromonas ingrahamii 37 4625252 YP_943245.1 CDS Ping_1870 NC_008709.1 2274249 2274962 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: ppr:PBPRB0234 putative transcriptional regulator, GntR family; transcriptional regulator complement(2274249..2274962) Psychromonas ingrahamii 37 4625253 YP_943246.1 CDS Ping_1871 NC_008709.1 2275166 2276695 R PFAM: protein of unknown function DUF112, transmembrane; KEGG: vpa:VP1653 putative tricarboxylic transport TctA; hypothetical protein complement(2275166..2276695) Psychromonas ingrahamii 37 4625254 YP_943247.1 CDS Ping_1872 NC_008709.1 2276706 2277185 R KEGG: ppr:PBPRA2755 putative tricarboxylic transport TctB; putative tricarboxylic transport TctB complement(2276706..2277185) Psychromonas ingrahamii 37 4624849 YP_943248.1 CDS Ping_1873 NC_008709.1 2277337 2278317 R PFAM: Uncharacterized protein UPF0065; KEGG: ppr:PBPRA2754 putative tricarboxylic transport TctC; hypothetical protein complement(2277337..2278317) Psychromonas ingrahamii 37 4624850 YP_943249.1 CDS Ping_1874 NC_008709.1 2278829 2279635 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: vfi:VFA0956 hydrolase (HAD superfamily); cof family hydrolase complement(2278829..2279635) Psychromonas ingrahamii 37 4624851 YP_943250.1 CDS Ping_1875 NC_008709.1 2280192 2280917 D primosomal replication protein N'' 2280192..2280917 Psychromonas ingrahamii 37 4624852 YP_943251.1 CDS Ping_1876 NC_008709.1 2281185 2281853 D KEGG: gsu:GSU1169 hypothetical protein; hypothetical protein 2281185..2281853 Psychromonas ingrahamii 37 4624853 YP_943252.1 CDS Ping_1877 NC_008709.1 2282260 2282697 D KEGG: pha:PSHAa1487 hypothetical protein; hypothetical protein 2282260..2282697 Psychromonas ingrahamii 37 4624854 YP_943253.1 CDS Ping_1878 NC_008709.1 2282817 2283752 D PFAM: band 7 protein; KEGG: pat:Patl_0198 band 7 protein; hypothetical protein 2282817..2283752 Psychromonas ingrahamii 37 4624855 YP_943254.1 CDS Ping_1879 NC_008709.1 2283755 2284237 D PFAM: protein of unknown function DUF107; KEGG: pat:Patl_0197 protein of unknown function DUF107; hypothetical protein 2283755..2284237 Psychromonas ingrahamii 37 4624856 YP_943255.1 CDS Ping_1880 NC_008709.1 2284517 2285950 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cps:CPS_4245 GGDEF domain protein; diguanylate cyclase 2284517..2285950 Psychromonas ingrahamii 37 4624857 YP_943256.1 CDS Ping_1881 NC_008709.1 2286214 2286423 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3760 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2286214..2286423 Psychromonas ingrahamii 37 4624858 YP_943257.1 CDS Ping_1882 NC_008709.1 2287158 2288039 R KEGG: cps:CPS_1386 hypothetical protein; hypothetical protein complement(2287158..2288039) Psychromonas ingrahamii 37 4624859 YP_943258.1 CDS Ping_1883 NC_008709.1 2288325 2290433 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: pcr:Pcryo_1246 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 2288325..2290433 Psychromonas ingrahamii 37 4624860 YP_943259.1 CDS Ping_1884 NC_008709.1 2290690 2291181 D PFAM: NUDIX hydrolase; KEGG: ppr:PBPRA1244 hypothetical protein; nucleotide phosphate derivative pyrophosphohydrolase 2290690..2291181 Psychromonas ingrahamii 37 4624861 YP_943260.1 CDS Ping_1885 NC_008709.1 2291243 2291857 D KEGG: sde:Sde_3411 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2291243..2291857 Psychromonas ingrahamii 37 4624862 YP_943261.1 CDS Ping_1886 NC_008709.1 2292002 2292247 R KEGG: pha:PSHAa1013 hypothetical protein; hypothetical protein complement(2292002..2292247) Psychromonas ingrahamii 37 4624863 YP_943262.1 CDS Ping_1887 NC_008709.1 2292368 2293294 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_4666 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2292368..2293294) Psychromonas ingrahamii 37 4624864 YP_943263.1 CDS Ping_1888 NC_008709.1 2293464 2294921 D KEGG: cps:CPS_2023 succinate-semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 2293464..2294921 Psychromonas ingrahamii 37 4624865 YP_943264.1 CDS Ping_1889 NC_008709.1 2295030 2296337 D KEGG: cps:CPS_4664 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase 2295030..2296337 Psychromonas ingrahamii 37 4624866 YP_943265.1 CDS Ping_1890 NC_008709.1 2296895 2297749 R PFAM: MscS Mechanosensitive ion channel; KEGG: pat:Patl_0259 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(2296895..2297749) Psychromonas ingrahamii 37 4624901 YP_943266.1 CDS Ping_1891 NC_008709.1 2298350 2299240 R PFAM: protein of unknown function UPF0052 and CofD; KEGG: vch:VC1023 conserved hypothetical protein; hypothetical protein complement(2298350..2299240) Psychromonas ingrahamii 37 4624902 YP_943267.1 CDS Ping_1892 NC_008709.1 2299584 2300720 R PFAM: lipase, class 3; KEGG: cps:CPS_2407 lipase family protein; lipase, class 3 complement(2299584..2300720) Psychromonas ingrahamii 37 4624903 YP_943268.1 CDS Ping_1893 NC_008709.1 2301479 2301652 D hypothetical protein 2301479..2301652 Psychromonas ingrahamii 37 4624904 YP_943269.1 CDS Ping_1894 NC_008709.1 2301921 2302619 R KEGG: dps:DP0519 hypothetical protein; hypothetical protein complement(2301921..2302619) Psychromonas ingrahamii 37 4624905 YP_943270.1 CDS Ping_1895 NC_008709.1 2302943 2305285 D PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; EcoEI R, C-terminal domain protein; SMART: DEAD-like helicases-like; KEGG: sdn:Sden_1234 type III restriction enzyme, res subunit; EcoEI R domain-containing protein 2302943..2305285 Psychromonas ingrahamii 37 4624906 YP_943271.1 CDS Ping_1897 NC_008709.1 2307232 2309067 D PFAM: restriction modification system DNA specificity domain; KEGG: ecs:ECs5306 type I restriction-modification enzyme S subunit; restriction modification system DNA specificity subunit 2307232..2309067 Psychromonas ingrahamii 37 4624908 YP_943272.1 CDS Ping_1898 NC_008709.1 2309069 2310565 D KEGG: ppr:PBPRA0687 hypothetical protein; hypothetical protein 2309069..2310565 Psychromonas ingrahamii 37 4624909 YP_943273.1 CDS Ping_1899 NC_008709.1 2310659 2312308 D KEGG: ppr:PBPRA0689 hypothetical protein; hypothetical protein 2310659..2312308 Psychromonas ingrahamii 37 4624910 YP_943274.1 CDS Ping_1900 NC_008709.1 2313458 2314453 R PFAM: phage integrase family protein; KEGG: psp:PSPPH_2410 site-specific recombinase, phage integrase family; phage integrase family protein complement(2313458..2314453) Psychromonas ingrahamii 37 4624911 YP_943275.1 CDS Ping_1901 NC_008709.1 2315915 2318803 R SMART: metal-dependent phosphohydrolase, HD region; KEGG: pfl:PFL_4240 chemotaxis sensory transducer family protein; metal dependent phosphohydrolase complement(2315915..2318803) Psychromonas ingrahamii 37 4624912 YP_943276.1 CDS Ping_1902 NC_008709.1 2319271 2321514 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psp:PSPPH_2471 inosine-uridine preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase complement(2319271..2321514) Psychromonas ingrahamii 37 4624913 YP_943277.1 CDS Ping_1903 NC_008709.1 2323269 2323736 D PFAM: adenylate cyclase; KEGG: syn:slr0698 hypothetical protein; adenylate cyclase 2323269..2323736 Psychromonas ingrahamii 37 4624914 YP_943278.1 CDS Ping_1904 NC_008709.1 2323828 2324061 D KEGG: tcx:Tcr_2112 hypothetical protein; hypothetical protein 2323828..2324061 Psychromonas ingrahamii 37 4624915 YP_943279.1 CDS Ping_1905 NC_008709.1 2324510 2325157 D PFAM: protein of unknown function DUF480; KEGG: vvy:VVA1225 hypothetical protein; hypothetical protein 2324510..2325157 Psychromonas ingrahamii 37 4624916 YP_943280.1 CDS Ping_1906 NC_008709.1 2325475 2326311 R PFAM: ADP-ribosylation/Crystallin J1; KEGG: hch:HCH_04135 ADP-ribosylglycohydrolase; ADP-ribosylation/crystallin J1 complement(2325475..2326311) Psychromonas ingrahamii 37 4624977 YP_943281.1 CDS Ping_1907 NC_008709.1 2326622 2327524 R PFAM: GCN5-related N-acetyltransferase; KEGG: sat:SYN_02633 beta-lysine acetyltransferase; N-acetyltransferase GCN5 complement(2326622..2327524) Psychromonas ingrahamii 37 4624978 YP_943282.1 CDS Ping_1908 NC_008709.1 2328157 2329749 D hypothetical protein 2328157..2329749 Psychromonas ingrahamii 37 4624979 YP_943283.1 CDS Ping_1910 NC_008709.1 2330529 2331425 D KEGG: pcr:Pcryo_0304 hypothetical protein; hypothetical protein 2330529..2331425 Psychromonas ingrahamii 37 4624981 YP_943284.1 CDS Ping_1911 NC_008709.1 2331493 2331780 D hypothetical protein 2331493..2331780 Psychromonas ingrahamii 37 4624982 YP_943285.1 CDS Ping_1914 NC_008709.1 2336735 2340721 R PFAM: protein of unknown function DUF490; KEGG: ppr:PBPRA0380 hypothetical protein; hypothetical protein complement(2336735..2340721) Psychromonas ingrahamii 37 4624985 YP_943286.1 CDS Ping_1915 NC_008709.1 2340718 2342445 R PFAM: surface antigen (D15); KEGG: pat:Patl_0260 surface antigen (D15); surface antigen (D15) complement(2340718..2342445) Psychromonas ingrahamii 37 4624986 YP_943287.1 CDS htpX NC_008709.1 2342689 2343555 R putative metalloprotease; heat shock protein HtpX complement(2342689..2343555) Psychromonas ingrahamii 37 4624987 YP_943288.1 CDS Ping_1917 NC_008709.1 2343718 2343999 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pha:PSHAa2488 peptidyl-prolyl cis-trans isomerase C (rotamase C); PpiC-type peptidyl-prolyl cis-trans isomerase 2343718..2343999 Psychromonas ingrahamii 37 4624988 YP_943289.1 CDS Ping_1918 NC_008709.1 2344107 2344874 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_2602 ABC transporter related; ABC transporter for amino acids ATP-binding protein complement(2344107..2344874) Psychromonas ingrahamii 37 4624989 YP_943290.1 CDS Ping_1919 NC_008709.1 2344874 2345545 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VV0007 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane protein complement(2344874..2345545) Psychromonas ingrahamii 37 4624990 YP_943291.1 CDS Ping_1920 NC_008709.1 2345619 2346377 R PFAM: extracellular solute-binding protein, family 3; KEGG: vfi:VF0008 cystine-binding protein; ABC amino acid transporter extracellular solute-binding protein complement(2345619..2346377) Psychromonas ingrahamii 37 4624991 YP_943292.1 CDS Ping_1921 NC_008709.1 2346768 2347475 R KEGG: vfi:VFA0745 dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase; dethiobiotin synthase complement(2346768..2347475) Psychromonas ingrahamii 37 4624992 YP_943293.1 CDS Ping_1922 NC_008709.1 2347781 2348620 R TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: vpa:VP1115 biotin synthesis protein BioC; biotin biosynthesis protein BioC complement(2347781..2348620) Psychromonas ingrahamii 37 4624993 YP_943294.1 CDS Ping_1923 NC_008709.1 2348671 2349849 R PFAM: aminotransferase, class I and II; KEGG: vfi:VFA0747 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(2348671..2349849) Psychromonas ingrahamii 37 4624994 YP_943295.1 CDS Ping_1924 NC_008709.1 2349853 2350908 R KEGG: pat:Patl_2557 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(2349853..2350908) Psychromonas ingrahamii 37 4624995 YP_943296.1 CDS Ping_1925 NC_008709.1 2351178 2352461 D TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: ppr:PBPRA2330 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2351178..2352461 Psychromonas ingrahamii 37 4626939 YP_943297.1 CDS asnC NC_008709.1 2352694 2354094 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 2352694..2354094 Psychromonas ingrahamii 37 4626940 YP_943298.1 CDS Ping_1927 NC_008709.1 2354462 2354644 D KEGG: pha:PSHAa1267 hypothetical protein; hypothetical protein 2354462..2354644 Psychromonas ingrahamii 37 4626941 YP_943299.1 CDS Ping_1928 NC_008709.1 2354718 2355335 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: pat:Patl_0590 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase complement(2354718..2355335) Psychromonas ingrahamii 37 4626942 YP_943300.1 CDS Ping_1930 NC_008709.1 2356661 2356987 R hypothetical protein complement(2356661..2356987) Psychromonas ingrahamii 37 4626944 YP_943301.1 CDS Ping_1931 NC_008709.1 2357031 2357993 R hypothetical protein complement(2357031..2357993) Psychromonas ingrahamii 37 4626945 YP_943302.1 CDS Ping_1932 NC_008709.1 2358769 2359305 R hypothetical protein complement(2358769..2359305) Psychromonas ingrahamii 37 4626946 YP_943303.1 CDS Ping_1933 NC_008709.1 2359621 2360046 R PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_3143 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2359621..2360046) Psychromonas ingrahamii 37 4626947 YP_943304.1 CDS Ping_1934 NC_008709.1 2360154 2360486 R KEGG: cps:CPS_3381 hypothetical protein; hypothetical protein complement(2360154..2360486) Psychromonas ingrahamii 37 4626948 YP_943305.1 CDS Ping_1935 NC_008709.1 2360580 2360786 R KEGG: cps:CPS_2680 hypothetical protein; hypothetical protein complement(2360580..2360786) Psychromonas ingrahamii 37 4626949 YP_943306.1 CDS Ping_1936 NC_008709.1 2360902 2361117 R KEGG: pol:Bpro_4795 hypothetical protein; hypothetical protein complement(2360902..2361117) Psychromonas ingrahamii 37 4626950 YP_943307.1 CDS Ping_1938 NC_008709.1 2361730 2362323 R hypothetical protein complement(2361730..2362323) Psychromonas ingrahamii 37 4626952 YP_943308.1 CDS Ping_1939 NC_008709.1 2362732 2363304 R hypothetical protein complement(2362732..2363304) Psychromonas ingrahamii 37 4626953 YP_943309.1 CDS Ping_1940 NC_008709.1 2363460 2364506 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: vpa:VPA0296 putative oxidoreductase protein; 2-nitropropane dioxygenase complement(2363460..2364506) Psychromonas ingrahamii 37 4626954 YP_943310.1 CDS Ping_1941 NC_008709.1 2364659 2365456 R PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: dps:DP1262 similar to voltage-gated potassium channel; Ion transport protein complement(2364659..2365456) Psychromonas ingrahamii 37 4626955 YP_943311.1 CDS Ping_1942 NC_008709.1 2365561 2365857 R PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: ppr:PBPRB1666 hypothetical protein; stress responsive alpha-beta barrel domain-containing protein complement(2365561..2365857) Psychromonas ingrahamii 37 4626956 YP_943312.1 CDS Ping_1943 NC_008709.1 2366752 2367159 D PFAM: regulatory protein, MerR; KEGG: rme:Rmet_5990 transcriptional regulator, MerR family; MerR family transcriptional regulator 2366752..2367159 Psychromonas ingrahamii 37 4626957 YP_943313.1 CDS Ping_1945 NC_008709.1 2367541 2367879 D TIGRFAM: mercuric transport protein periplasmic component; KEGG: pol:Bpro_4796 mercuric transport protein periplasmic component; mercuric transport periplasmic protein 2367541..2367879 Psychromonas ingrahamii 37 4626986 YP_943314.1 CDS Ping_1946 NC_008709.1 2368307 2368639 R hypothetical protein complement(2368307..2368639) Psychromonas ingrahamii 37 4626987 YP_943315.1 CDS Ping_1947 NC_008709.1 2368762 2369052 R KEGG: cps:CPS_2864 hypothetical protein; hypothetical protein complement(2368762..2369052) Psychromonas ingrahamii 37 4626988 YP_943316.1 CDS Ping_1948 NC_008709.1 2369774 2370421 D KEGG: cps:CPS_0518 hypothetical protein; hypothetical protein 2369774..2370421 Psychromonas ingrahamii 37 4626989 YP_943317.1 CDS Ping_1949 NC_008709.1 2370423 2370854 D KEGG: sfr:Sfri_0606 hypothetical protein; hypothetical protein 2370423..2370854 Psychromonas ingrahamii 37 4626990 YP_943318.1 CDS Ping_1950 NC_008709.1 2371015 2372322 R PFAM: nucleoside recognition domain protein; KEGG: bat:BAS2893 hypothetical protein; nucleoside recognition domain-containing protein complement(2371015..2372322) Psychromonas ingrahamii 37 4626991 YP_943319.1 CDS Ping_1951 NC_008709.1 2372870 2373796 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: vfi:VFA1080 transporter, drug/metabolite exporter family; hypothetical protein 2372870..2373796 Psychromonas ingrahamii 37 4626992 YP_943320.1 CDS Ping_1952 NC_008709.1 2374175 2375071 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: tko:TK2009 cobalt/zinc/cadmium cation efflux pump protein; cation diffusion facilitator family transporter 2374175..2375071 Psychromonas ingrahamii 37 4626993 YP_943321.1 CDS Ping_1953 NC_008709.1 2375357 2375566 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3558 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(2375357..2375566) Psychromonas ingrahamii 37 4626994 YP_943322.1 CDS Ping_1954 NC_008709.1 2375936 2377237 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: mca:MCA2605 alpha amylase family protein; alpha amylase complement(2375936..2377237) Psychromonas ingrahamii 37 4626995 YP_943323.1 CDS Ping_1955 NC_008709.1 2377614 2378696 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pat:Patl_2855 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase complement(2377614..2378696) Psychromonas ingrahamii 37 4626996 YP_943324.1 CDS Ping_1956 NC_008709.1 2379433 2380686 D PFAM: extracellular solute-binding protein, family 1; KEGG: vvy:VV1092 ABC-type sugar transport system, periplasmic component; sugar ABC transporter extracellular solute-binding family 1 protein 2379433..2380686 Psychromonas ingrahamii 37 4626997 YP_943325.1 CDS Ping_1957 NC_008709.1 2380776 2381675 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_06081 ABC-type sugar transport system, permease components; ABC transporter substrate binding inner membrane protein 2380776..2381675 Psychromonas ingrahamii 37 4626998 YP_943326.1 CDS Ping_1958 NC_008709.1 2381665 2382510 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_06080 ABC-type sugar transport system, permease component; sugar ABC transporter inner membrane binding protein 2381665..2382510 Psychromonas ingrahamii 37 4626999 YP_943327.1 CDS Ping_1959 NC_008709.1 2382522 2383625 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_06079 ABC-type sugar transport system, ATPase components; sugar ABC transporter ATP-binding protein 2382522..2383625 Psychromonas ingrahamii 37 4627000 YP_943328.1 CDS Ping_1960 NC_008709.1 2383691 2384998 R KEGG: vvy:VVA0946 hypothetical protein; hypothetical protein complement(2383691..2384998) Psychromonas ingrahamii 37 4627001 YP_943329.1 CDS Ping_1961 NC_008709.1 2385580 2386389 R KEGG: vvu:VV20388 hypothetical protein; hypothetical protein complement(2385580..2386389) Psychromonas ingrahamii 37 4627002 YP_943330.1 CDS Ping_1963 NC_008709.1 2386997 2388367 R KEGG: vvu:VV20388 hypothetical protein; hypothetical protein complement(2386997..2388367) Psychromonas ingrahamii 37 4627040 YP_943331.1 CDS Ping_1964 NC_008709.1 2388743 2390464 R KEGG: gme:Gmet_1851 pentapeptide repeat protein; hypothetical protein complement(2388743..2390464) Psychromonas ingrahamii 37 4627041 YP_943332.1 CDS Ping_1965 NC_008709.1 2390773 2392287 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(2390773..2392287) Psychromonas ingrahamii 37 4627042 YP_943333.1 CDS Ping_1966 NC_008709.1 2392410 2392910 R PFAM: Colicin V production protein; KEGG: ilo:IL1013 uncharacterized membrane protein; colicin V production protein complement(2392410..2392910) Psychromonas ingrahamii 37 4627043 YP_943334.1 CDS Ping_1967 NC_008709.1 2392982 2393599 R PFAM: Sporulation domain protein; KEGG: vfi:VF1693 DedD protein; sporulation domain-containing protein complement(2392982..2393599) Psychromonas ingrahamii 37 4627044 YP_943335.1 CDS Ping_1968 NC_008709.1 2393603 2394889 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: ppr:PBPRA2651 putative folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(2393603..2394889) Psychromonas ingrahamii 37 4627045 YP_943336.1 CDS Ping_1969 NC_008709.1 2394903 2395688 R KEGG: vch:VC0999 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A complement(2394903..2395688) Psychromonas ingrahamii 37 4627046 YP_943337.1 CDS Ping_1970 NC_008709.1 2395836 2396330 R hypothetical protein complement(2395836..2396330) Psychromonas ingrahamii 37 4627047 YP_943338.1 CDS Ping_1971 NC_008709.1 2396646 2399297 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(2396646..2399297) Psychromonas ingrahamii 37 4627048 YP_943339.2 CDS Ping_1972 NC_008709.1 2399488 2400537 R SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease complement(2399488..2400537) Psychromonas ingrahamii 37 4627049 YP_943340.1 CDS Ping_1973 NC_008709.1 2400666 2401403 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO2935 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2400666..2401403 Psychromonas ingrahamii 37 4627050 YP_943341.1 CDS Ping_1974 NC_008709.1 2401486 2402451 R TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: ppr:PBPRA0219 putative lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase complement(2401486..2402451) Psychromonas ingrahamii 37 4627051 YP_943342.1 CDS pssA NC_008709.1 2402841 2404193 R catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase complement(2402841..2404193) Psychromonas ingrahamii 37 4627053 YP_943343.1 CDS Ping_1976 NC_008709.1 2404275 2405465 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(2404275..2405465) Psychromonas ingrahamii 37 4627220 YP_943344.1 CDS Ping_1977 NC_008709.1 2405550 2407088 R TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: sdn:Sden_1912 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; fumarate hydratase complement(2405550..2407088) Psychromonas ingrahamii 37 4627221 YP_943345.1 CDS Ping_1978 NC_008709.1 2407212 2408636 D TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: vvy:VV2080 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I 2407212..2408636 Psychromonas ingrahamii 37 4627222 YP_943346.1 CDS cysB NC_008709.1 2408696 2409667 R LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB complement(2408696..2409667) Psychromonas ingrahamii 37 4627223 YP_943347.1 CDS Ping_1980 NC_008709.1 2409956 2410345 D KEGG: sdn:Sden_2389 hypothetical protein; dnaK suppressor 2409956..2410345 Psychromonas ingrahamii 37 4627224 YP_943348.1 CDS Ping_1981 NC_008709.1 2410433 2412121 D KEGG: vfi:VF1293 ATP-dependent protease La; ATP-dependent protease La 2410433..2412121 Psychromonas ingrahamii 37 4627225 YP_943349.1 CDS Ping_1982 NC_008709.1 2412279 2412818 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 2412279..2412818 Psychromonas ingrahamii 37 4627226 YP_943350.1 CDS Ping_1983 NC_008709.1 2412914 2414767 D TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: vpa:VP2152 protease IV; signal peptide peptidase SppA, 67K type 2412914..2414767 Psychromonas ingrahamii 37 4627227 YP_943351.1 CDS Ping_1984 NC_008709.1 2414919 2415380 D KEGG: ppr:PBPRA0858 hypothetical protein; hypothetical protein 2414919..2415380 Psychromonas ingrahamii 37 4627228 YP_943352.1 CDS Ping_1985 NC_008709.1 2415454 2416740 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: plu:plu2821 NADH dehydrogenase; bifunctional respiratory FAD-dependent NADH dehydrogenase/cupric reductase complement(2415454..2416740) Psychromonas ingrahamii 37 4627229 YP_943353.1 CDS Ping_1986 NC_008709.1 2417037 2417576 R PFAM: protein of unknown function UPF0227; KEGG: vfi:VF1142 hypothetical protein; hypothetical protein complement(2417037..2417576) Psychromonas ingrahamii 37 4627230 YP_943354.1 CDS Ping_1987 NC_008709.1 2417660 2418673 R PFAM: glycoside hydrolase, family 3 domain protein; KEGG: yps:YPTB2449 beta-hexosaminidase; glycoside hydrolase family protein complement(2417660..2418673) Psychromonas ingrahamii 37 4627231 YP_943355.1 CDS Ping_1988 NC_008709.1 2419079 2420050 R KEGG: vfi:VF1697 latent nuclear antigen; Tfp pilus assembly protein FimV-like protein complement(2419079..2420050) Psychromonas ingrahamii 37 4627232 YP_943356.1 CDS Ping_1992 NC_008709.1 2421504 2422514 R KEGG: vfi:VF1697 latent nuclear antigen; Tfp pilus assembly protein FimV-like protein complement(2421504..2422514) Psychromonas ingrahamii 37 4627236 YP_943357.1 CDS Ping_1993 NC_008709.1 2422655 2423737 R PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; KEGG: vch:VC2107 aspartate-semialdehyde dehydrogenase, putative; aspartate-semialdehyde dehydrogenase complement(2422655..2423737) Psychromonas ingrahamii 37 4627237 YP_943358.1 CDS Ping_1994 NC_008709.1 2423727 2424878 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cps:CPS_3806 erythronate-4-phosphate dehydrogenase; erythronate-4-phosphate dehydrogenase complement(2423727..2424878) Psychromonas ingrahamii 37 4627238 YP_943359.1 CDS Ping_1995 NC_008709.1 2424993 2426207 R PFAM: beta-ketoacyl synthase; KEGG: vfi:VF1700 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl synthase complement(2424993..2426207) Psychromonas ingrahamii 37 4627201 YP_943360.1 CDS Ping_1996 NC_008709.1 2426322 2428394 D PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: vfi:VF1701 hypothetical protein; bifunctional 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme 2426322..2428394 Psychromonas ingrahamii 37 4627202 YP_943361.1 CDS Ping_1997 NC_008709.1 2428581 2429630 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2428581..2429630 Psychromonas ingrahamii 37 4627203 YP_943362.1 CDS Ping_1998 NC_008709.1 2429632 2430513 D PFAM: alpha/beta hydrolase fold; KEGG: son:SO1743 hydrolase, alpha/beta hydrolase fold family; alpha/beta hydrolase fold protein 2429632..2430513 Psychromonas ingrahamii 37 4627204 YP_943363.1 CDS Ping_1999 NC_008709.1 2430517 2432181 D Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase 2430517..2432181 Psychromonas ingrahamii 37 4627205 YP_943364.1 CDS Ping_2000 NC_008709.1 2432193 2433266 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ppr:PBPRA1465 steroid dehydrogenase; 3-beta hydroxysteroid dehydrogenase/isomerase 2432193..2433266 Psychromonas ingrahamii 37 4627206 YP_943365.1 CDS Ping_2001 NC_008709.1 2433782 2434096 D hypothetical protein 2433782..2434096 Psychromonas ingrahamii 37 4627207 YP_943366.1 CDS Ping_2003 NC_008709.1 2435630 2436022 R hypothetical protein complement(2435630..2436022) Psychromonas ingrahamii 37 4627209 YP_943367.1 CDS Ping_2004 NC_008709.1 2436481 2437932 D catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 2436481..2437932 Psychromonas ingrahamii 37 4627210 YP_943368.1 CDS Ping_2005 NC_008709.1 2438340 2439452 R PFAM: stress protein; KEGG: yps:YPTB0353 putative tellurite resistance protein; stress protein, tellurium resistance protein TerD complement(2438340..2439452) Psychromonas ingrahamii 37 4627211 YP_943369.1 CDS Ping_2006 NC_008709.1 2440028 2442202 R KEGG: cps:CPS_3258 sensory box/GGDEF/GAF/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2440028..2442202) Psychromonas ingrahamii 37 4627212 YP_943370.1 CDS Ping_2007 NC_008709.1 2442573 2442776 D hypothetical protein 2442573..2442776 Psychromonas ingrahamii 37 4627213 YP_943371.1 CDS Ping_2008 NC_008709.1 2442805 2444031 R PFAM: extracellular solute-binding protein, family 1; KEGG: bpm:BURPS1710b_A1184 ABC transporter, substrate-binding protein; ABC transporter extracellular solute-binding protein complement(2442805..2444031) Psychromonas ingrahamii 37 4627214 YP_943372.1 CDS Ping_2009 NC_008709.1 2444339 2445190 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2864 ABC transporter, permease protein, putative; sugar ABC transporter inner membrane binding protein complement(2444339..2445190) Psychromonas ingrahamii 37 4627215 YP_943373.1 CDS Ping_2010 NC_008709.1 2445190 2446146 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2863 sugar ABC transporter, permease protein, putative; ABC transporter substrate binding inner membrane protein complement(2445190..2446146) Psychromonas ingrahamii 37 4627216 YP_943374.1 CDS Ping_2011 NC_008709.1 2446496 2447581 D PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: eca:ECA0851 putative sugar ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 2446496..2447581 Psychromonas ingrahamii 37 4627217 YP_943375.1 CDS Ping_2012 NC_008709.1 2447863 2448369 D PFAM: phosphotransferase system PTS, EIIB protein; KEGG: ppr:PBPRA1203 putative PTS system, glucose-specific IIBC; PTS system transporter subunit IIB 2447863..2448369 Psychromonas ingrahamii 37 4627218 YP_943376.1 CDS lacI NC_008709.1 2448811 2449881 R transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor complement(2448811..2449881) Psychromonas ingrahamii 37 4627219 YP_943377.1 CDS Ping_2014 NC_008709.1 2450553 2452655 D PFAM: glycoside hydrolase, clan GH-D; KEGG: vvy:VVA0166 alpha-galactosidase; glycoside hydrolase 2450553..2452655 Psychromonas ingrahamii 37 4626520 YP_943378.1 CDS Ping_2015 NC_008709.1 2452892 2453911 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG: vfi:VFA0352 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2452892..2453911 Psychromonas ingrahamii 37 4626521 YP_943379.1 CDS Ping_2016 NC_008709.1 2453997 2455049 D catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 2453997..2455049 Psychromonas ingrahamii 37 4626522 YP_943380.1 CDS Ping_2017 NC_008709.1 2455103 2456266 D catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 2455103..2456266 Psychromonas ingrahamii 37 4626523 YP_943381.1 CDS Ping_2018 NC_008709.1 2456322 2457395 D KEGG: ppr:PBPRA2079 hypothetical aldose 1-epimerase; TIGRFAM: galactose mutarotase; PFAM: Aldose 1-epimerase; galactose mutarotase 2456322..2457395 Psychromonas ingrahamii 37 4626524 YP_943382.1 CDS lacZ NC_008709.1 2457541 2460648 D forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 2457541..2460648 Psychromonas ingrahamii 37 4624702 YP_943383.1 CDS Ping_2020 NC_008709.1 2461184 2463613 R KEGG: sat:SYN_02351 cation transport ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase complement(2461184..2463613) Psychromonas ingrahamii 37 4624703 YP_943384.1 CDS Ping_2024 NC_008709.1 2466718 2469735 D KEGG: mag:amb2165 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; bifunctional PAS sensor histidine kinase protein/response regulator 2466718..2469735 Psychromonas ingrahamii 37 4624707 YP_943385.1 CDS Ping_2025 NC_008709.1 2469736 2470908 D PFAM: EAL domain protein; response regulator receiver; KEGG: mag:amb3312 PvrR; cyclic-di-GMP regulatory protein 2469736..2470908 Psychromonas ingrahamii 37 4624708 YP_943386.1 CDS Ping_2026 NC_008709.1 2471284 2472450 R PFAM: peptidase M24; KEGG: dps:DP1387 similar to dipeptidase; peptidase M24 complement(2471284..2472450) Psychromonas ingrahamii 37 4624709 YP_943387.1 CDS Ping_2027 NC_008709.1 2473014 2474162 R KEGG: cps:CPS_4917 amidohydrolase family protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(2473014..2474162) Psychromonas ingrahamii 37 4624710 YP_943388.1 CDS Ping_2028 NC_008709.1 2474544 2475215 D PFAM: YheO domain protein; KEGG: vvy:VV1021 hypothetical protein; YheO domain-containing protein 2474544..2475215 Psychromonas ingrahamii 37 4624588 YP_943389.1 CDS Ping_2029 NC_008709.1 2475225 2475605 D TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: vvy:VV1022 putative translation initiation inhibitor; endoribonuclease L-PSP 2475225..2475605 Psychromonas ingrahamii 37 4624589 YP_943390.1 CDS Ping_2030 NC_008709.1 2475707 2476879 D catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 2475707..2476879 Psychromonas ingrahamii 37 4624590 YP_943391.1 CDS Ping_2031 NC_008709.1 2477461 2478252 R PFAM: Asp/Glu racemase; KEGG: bcn:Bcen_6407 Asp/Glu racemase; Asp/Glu racemase complement(2477461..2478252) Psychromonas ingrahamii 37 4624591 YP_943392.1 CDS Ping_2032 NC_008709.1 2478302 2479192 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: cps:CPS_4912 membrane protein; hypothetical protein complement(2478302..2479192) Psychromonas ingrahamii 37 4624592 YP_943393.1 CDS Ping_2033 NC_008709.1 2479215 2480552 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: cps:CPS_4914 C4-dicarboxylate transporter family protein, DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(2479215..2480552) Psychromonas ingrahamii 37 4624593 YP_943394.1 CDS Ping_2034 NC_008709.1 2480549 2481088 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: cps:CPS_4915 C4-dicarboxylate transporter family protein, DctQ subunit; tripartite ATP-independent periplasmic transporter DctQ complement(2480549..2481088) Psychromonas ingrahamii 37 4624594 YP_943395.1 CDS Ping_2035 NC_008709.1 2481159 2482208 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: cps:CPS_4916 putative C4-dicarboxylate-binding periplasmic protein DctP; TRAP dicarboxylate transporter subunit DctP complement(2481159..2482208) Psychromonas ingrahamii 37 4624595 YP_943396.1 CDS Ping_2040 NC_008709.1 2486038 2487138 R PFAM: UDP-galactopyranose mutase; KEGG: ecj:JW2021 UDP-galactopyranose mutase, FAD/NAD(P)-binding; UDP-galactopyranose mutase complement(2486038..2487138) Psychromonas ingrahamii 37 4624600 YP_943397.1 CDS Ping_2041 NC_008709.1 2487157 2488404 R PFAM: polysaccharide biosynthesis protein; KEGG: vfi:VF0170 flippase; polysaccharide biosynthesis protein complement(2487157..2488404) Psychromonas ingrahamii 37 4624601 YP_943398.1 CDS Ping_2042 NC_008709.1 2488481 2489173 R PFAM: transposase, IS4 family protein; KEGG: ppr:PBPRA1587 putative transposase; transposase, IS4 family protein complement(2488481..2489173) Psychromonas ingrahamii 37 4624602 YP_943399.1 CDS Ping_2044 NC_008709.1 2490001 2490282 R KEGG: sde:Sde_0281 hypothetical protein; hypothetical protein complement(2490001..2490282) Psychromonas ingrahamii 37 4624604 YP_943400.1 CDS Ping_2045 NC_008709.1 2490686 2491156 R PFAM: Ferritin, Dps family protein; KEGG: pat:Patl_3841 ferritin and Dps; Ferritin, Dps family protein complement(2490686..2491156) Psychromonas ingrahamii 37 4624605 YP_943401.1 CDS Ping_2047 NC_008709.1 2492792 2493736 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: tel:tlr2037 transcriptional regulator; LysR family transcriptional regulator complement(2492792..2493736) Psychromonas ingrahamii 37 4624686 YP_943402.1 CDS Ping_2048 NC_008709.1 2494010 2494489 D KEGG: vpa:VP3036 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 2494010..2494489 Psychromonas ingrahamii 37 4624687 YP_943403.1 CDS Ping_2049 NC_008709.1 2494489 2495619 D PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; KEGG: hch:HCH_04604 phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); phosphoribosylaminoimidazole carboxylase 2494489..2495619 Psychromonas ingrahamii 37 4624688 YP_943404.1 CDS Ping_2050 NC_008709.1 2495651 2497366 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: vpa:VP2513 sulfate permease family protein; sulfate transporter 2495651..2497366 Psychromonas ingrahamii 37 4624689 YP_943405.1 CDS Ping_2051 NC_008709.1 2497955 2500066 R KEGG: tcx:Tcr_1222 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2497955..2500066) Psychromonas ingrahamii 37 4624690 YP_943406.1 CDS Ping_2054 NC_008709.1 2502012 2502971 R KEGG: vfi:VFA0685 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(2502012..2502971) Psychromonas ingrahamii 37 4624693 YP_943407.1 CDS ulaA NC_008709.1 2503122 2504378 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2503122..2504378) Psychromonas ingrahamii 37 4624694 YP_943408.1 CDS Ping_2056 NC_008709.1 2504388 2504675 R PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: yps:YPTB2601 PTS system, IIB component, possible mannitol or pentitol permease; phosphotransferase system, lactose/cellobiose-specific IIB subunit complement(2504388..2504675) Psychromonas ingrahamii 37 4624695 YP_943409.1 CDS Ping_2057 NC_008709.1 2504743 2505186 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: vpa:VPA0231 phosphotransferase enzyme II, A component; putative PTS IIA-like nitrogen-regulatory protein PtsN complement(2504743..2505186) Psychromonas ingrahamii 37 4624696 YP_943410.1 CDS Ping_2058 NC_008709.1 2505472 2506497 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vpa:VPA0232 putative transcriptional regulator; LacI family transcriptional regulator 2505472..2506497 Psychromonas ingrahamii 37 4624697 YP_943411.1 CDS Ping_2059 NC_008709.1 2506942 2507586 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nar:Saro_1836 pyrimidine 5-nucleotidase; pyrimidine 5'-nucleotidase complement(2506942..2507586) Psychromonas ingrahamii 37 4624698 YP_943412.1 CDS Ping_2061 NC_008709.1 2510134 2510658 R PFAM: protein of unknown function DUF45; KEGG: cps:CPS_3293 conserved hypothetical protein; hypothetical protein complement(2510134..2510658) Psychromonas ingrahamii 37 4624700 YP_943413.1 CDS Ping_2062 NC_008709.1 2511277 2512878 D PFAM: protein of unknown function UPF0061; KEGG: rba:RB9953 hypothetical protein; hypothetical protein 2511277..2512878 Psychromonas ingrahamii 37 4624701 YP_943414.1 CDS Ping_2063 NC_008709.1 2513142 2513867 D PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein; hypothetical protein 2513142..2513867 Psychromonas ingrahamii 37 4624666 YP_943415.1 CDS Ping_2064 NC_008709.1 2514004 2514240 R PFAM: glutaredoxin; KEGG: cps:CPS_0640 putative glutaredoxin; glutaredoxin complement(2514004..2514240) Psychromonas ingrahamii 37 4624667 YP_943416.1 CDS Ping_2065 NC_008709.1 2514317 2514787 R PFAM: NUDIX hydrolase; KEGG: ngo:NGO0224 putative pyrophosphohydrolase; nucleotide phosphate derivative pyrophosphohydrolase complement(2514317..2514787) Psychromonas ingrahamii 37 4624668 YP_943417.1 CDS Ping_2066 NC_008709.1 2515153 2515617 R KEGG: noc:Noc_1879 AAA ATPase; hypothetical protein complement(2515153..2515617) Psychromonas ingrahamii 37 4624669 YP_943418.1 CDS Ping_2067 NC_008709.1 2515707 2516168 R PFAM: Sterol-binding domain protein; KEGG: vvy:VV2689 putative lipid carrier protein; sterol-binding domain-containing protein complement(2515707..2516168) Psychromonas ingrahamii 37 4624670 YP_943419.1 CDS Ping_2069 NC_008709.1 2516530 2518323 D KEGG: rde:RD1_1973 ABC transporter, ATP-binding protein, putative; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 2516530..2518323 Psychromonas ingrahamii 37 4624672 YP_943420.1 CDS betI NC_008709.1 2518829 2519437 D HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 2518829..2519437 Psychromonas ingrahamii 37 4624673 YP_943421.1 CDS Ping_2071 NC_008709.1 2519425 2520891 D catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 2519425..2520891 Psychromonas ingrahamii 37 4624674 YP_943422.1 CDS Ping_2072 NC_008709.1 2520901 2522589 D catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 2520901..2522589 Psychromonas ingrahamii 37 4624675 YP_943423.1 CDS Ping_2073 NC_008709.1 2522746 2523678 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: vpa:VPA1111 putative glycine betaine-binding ABC transporter; glycine betaine ABC transporter substrate-binding protein 2522746..2523678 Psychromonas ingrahamii 37 4624676 YP_943424.1 CDS Ping_2074 NC_008709.1 2524009 2524884 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00853 ABC-type proline/glycine betaine transport system, permease component; ABC transporter substrate binding inner membrane protein 2524009..2524884 Psychromonas ingrahamii 37 4624677 YP_943425.1 CDS Ping_2075 NC_008709.1 2524903 2526081 D KEGG: hch:HCH_00854 ABC-type proline/glycine betaine transport system, ATPase component; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 2524903..2526081 Psychromonas ingrahamii 37 4624678 YP_943426.1 CDS Ping_2076 NC_008709.1 2526372 2527589 D KEGG: sdn:Sden_0716 putative transporter, BCCT family protein; putative transporter, BCCT family protein 2526372..2527589 Psychromonas ingrahamii 37 4624679 YP_943427.1 CDS Ping_2077 NC_008709.1 2527765 2528250 D PFAM: regulatory protein, MarR; KEGG: sdn:Sden_0718 regulatory protein, MarR; MarR family transcriptional regulator 2527765..2528250 Psychromonas ingrahamii 37 4624680 YP_943428.1 CDS Ping_2078 NC_008709.1 2528602 2528943 D PFAM: transport-associated; KEGG: nmu:Nmul_A1193 transport-associated; transport-associated 2528602..2528943 Psychromonas ingrahamii 37 4624681 YP_943429.1 CDS Ping_2079 NC_008709.1 2529052 2529195 D KEGG: cps:CPS_4052 membrane protein; hypothetical protein 2529052..2529195 Psychromonas ingrahamii 37 4624682 YP_943430.1 CDS Ping_2081 NC_008709.1 2529694 2530236 D PFAM: NADPH-dependent FMN reductase; KEGG: pmu:PM1472 hypothetical M. pneumoniae; NADPH-dependent FMN reductase 2529694..2530236 Psychromonas ingrahamii 37 4624684 YP_943431.1 CDS Ping_2082 NC_008709.1 2530320 2531576 R PFAM: FAD dependent oxidoreductase; KEGG: atc:AGR_L_3050 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase complement(2530320..2531576) Psychromonas ingrahamii 37 4627004 YP_943432.1 CDS Ping_2083 NC_008709.1 2532237 2533898 D TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: jan:Jann_0020 amino acid carrier protein; amino acid transport integral membrane protein 2532237..2533898 Psychromonas ingrahamii 37 4627005 YP_943433.1 CDS Ping_2084 NC_008709.1 2534042 2535169 D KEGG: tte:TTE2168 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2534042..2535169 Psychromonas ingrahamii 37 4627006 YP_943434.1 CDS Ping_2085 NC_008709.1 2535838 2538393 D KEGG: mmc:Mmcs_0603 ABC transporter related; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 2535838..2538393 Psychromonas ingrahamii 37 4627007 YP_943435.1 CDS Ping_2087 NC_008709.1 2538886 2539770 R PFAM: alpha/beta hydrolase fold; KEGG: ana:alr0039 putative hydrolase; alpha/beta hydrolase fold protein complement(2538886..2539770) Psychromonas ingrahamii 37 4627009 YP_943436.1 CDS Ping_2088 NC_008709.1 2540879 2543590 D KEGG: vpa:VP0092 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2540879..2543590 Psychromonas ingrahamii 37 4627010 YP_943437.1 CDS Ping_2089 NC_008709.1 2543848 2544348 R PFAM: GCN5-related N-acetyltransferase; KEGG: vpa:VPA0122 hypothetical protein; N-acetyltransferase GCN5 complement(2543848..2544348) Psychromonas ingrahamii 37 4627011 YP_943438.1 CDS Ping_2091 NC_008709.1 2546579 2547346 R PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rme:Rmet_2235 transcriptional regulator, DeoR family; transcriptional regulator for glycerol-3-phosphate regulon, DeoR family protein complement(2546579..2547346) Psychromonas ingrahamii 37 4627013 YP_943439.1 CDS Ping_2092 NC_008709.1 2547389 2548141 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: vch:VC1554 glycerophosphoryl diester phosphodiesterase, putative; glycerophosphodiester phosphodiesterase complement(2547389..2548141) Psychromonas ingrahamii 37 4627014 YP_943440.1 CDS Ping_2093 NC_008709.1 2548420 2549727 D PFAM: extracellular solute-binding protein, family 1; KEGG: csa:Csal_2738 extracellular solute-binding protein, family 1; glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein 2548420..2549727 Psychromonas ingrahamii 37 4627015 YP_943441.1 CDS Ping_2094 NC_008709.1 2549830 2550711 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO0239 SN-glycerol-3-phosphate ABC transporter, permease protein; sn-glycerol-3-phosphate transport system, binding protein inner membrane component 2549830..2550711 Psychromonas ingrahamii 37 4627016 YP_943442.1 CDS Ping_2095 NC_008709.1 2550711 2551559 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00080 sn-glycerol-3-phosphate ABC transporter, permease protein; sn-glycerol-3-phosphate ABC transporter binding protein inner membrane component 2550711..2551559 Psychromonas ingrahamii 37 4627017 YP_943443.1 CDS Ping_2096 NC_008709.1 2551560 2552681 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: reu:Reut_A2049 ABC transporter related; ABC transporter ATP-binding protein 2551560..2552681 Psychromonas ingrahamii 37 4627018 YP_943444.1 CDS Ping_2097 NC_008709.1 2552674 2553480 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: ppr:PBPRB1003 hypothetical protein; HAD family hydrolase 2552674..2553480 Psychromonas ingrahamii 37 4627019 YP_943445.1 CDS Ping_2098 NC_008709.1 2553735 2554424 R TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: vfi:VFA0624 aspartate racemase; aspartate racemase complement(2553735..2554424) Psychromonas ingrahamii 37 4627020 YP_943446.1 CDS Ping_2099 NC_008709.1 2554974 2555849 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sec:SC2670 putative cytoplasmic protein; SMP-30/gluconolaconase/LRE domain-containing protein 2554974..2555849 Psychromonas ingrahamii 37 4626678 YP_943447.1 CDS Ping_2100 NC_008709.1 2556257 2556508 D KEGG: vfi:VFA0020 hypothetical protein; hypothetical protein 2556257..2556508 Psychromonas ingrahamii 37 4626679 YP_943448.1 CDS Ping_2102 NC_008709.1 2557172 2557363 R KEGG: tdn:Tmden_0834 hypothetical protein; hypothetical protein complement(2557172..2557363) Psychromonas ingrahamii 37 4626681 YP_943449.1 CDS Ping_2103 NC_008709.1 2557793 2559022 R PFAM: CBS domain containing protein; EAL domain protein; KEGG: ilo:IL2293 signaling protein (EAL,CBS,GGDEF domains); cyclic-di-GMP regulatory protein complement(2557793..2559022) Psychromonas ingrahamii 37 4626682 YP_943450.1 CDS Ping_2104 NC_008709.1 2559106 2562021 R PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV; UvrD/REP helicase complement(2559106..2562021) Psychromonas ingrahamii 37 4626683 YP_943451.1 CDS Ping_2106 NC_008709.1 2563046 2563855 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rba:RB9586 probable oxidoreductase; short-chain dehydrogenase/reductase SDR 2563046..2563855 Psychromonas ingrahamii 37 4626685 YP_943452.1 CDS Ping_2107 NC_008709.1 2564142 2566928 R PFAM: glycoside hydrolase, family 3 domain protein; KEGG: vvu:VV21304 beta-glucosidase-related glycosidase; glycoside hydrolase family protein complement(2564142..2566928) Psychromonas ingrahamii 37 4626686 YP_943453.1 CDS Ping_2108 NC_008709.1 2567516 2567926 D PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: son:SO0771 hypothetical protein; putative thiol-disulfide oxidoreductase DCC 2567516..2567926 Psychromonas ingrahamii 37 4626687 YP_943454.1 CDS Ping_2109 NC_008709.1 2567926 2568684 D KEGG: cps:CPS_0516 oxidoreductase, short-chain dehydrogenase/reductase family; oxidoreductase, short-chain dehydrogenase/reductase family protein 2567926..2568684 Psychromonas ingrahamii 37 4626688 YP_943455.1 CDS Ping_2110 NC_008709.1 2568856 2569365 D PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: pat:Patl_2349 hypothetical protein; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 2568856..2569365 Psychromonas ingrahamii 37 4626689 YP_943456.1 CDS Ping_2111 NC_008709.1 2569537 2570466 R KEGG: cps:CPS_4482 Bax domain protein; Fis family transcriptional regulator complement(2569537..2570466) Psychromonas ingrahamii 37 4626690 YP_943457.1 CDS Ping_2112 NC_008709.1 2570988 2571335 R KEGG: cps:CPS_2270 hypothetical protein; hypothetical protein complement(2570988..2571335) Psychromonas ingrahamii 37 4626691 YP_943458.1 CDS Ping_2113 NC_008709.1 2571669 2572094 R hypothetical protein complement(2571669..2572094) Psychromonas ingrahamii 37 4626692 YP_943459.1 CDS Ping_2114 NC_008709.1 2572545 2574194 R hypothetical protein complement(2572545..2574194) Psychromonas ingrahamii 37 4626693 YP_943460.1 CDS Ping_2116 NC_008709.1 2575306 2576325 R PFAM: Malate/L-lactate dehydrogenase; KEGG: pub:SAR11_0966 hypothetical oxidoreductase YiaK; malate/L-lactate dehydrogenase complement(2575306..2576325) Psychromonas ingrahamii 37 4626695 YP_943461.1 CDS Ping_2117 NC_008709.1 2576404 2577450 R PFAM: proline racemase; KEGG: atc:AGR_L_395 hypothetical protein; proline racemase complement(2576404..2577450) Psychromonas ingrahamii 37 4626696 YP_943462.1 CDS Ping_2118 NC_008709.1 2577630 2578310 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pae:PA1269 probable transcriptional regulator; transcriptional regulator 2577630..2578310 Psychromonas ingrahamii 37 4623975 YP_943463.1 CDS Ping_2119 NC_008709.1 2578659 2579198 R PFAM: isochorismatase hydrolase; KEGG: cps:CPS_3409 isochorismatase family protein; isochorismatase hydrolase complement(2578659..2579198) Psychromonas ingrahamii 37 4623976 YP_943464.1 CDS Ping_2120 NC_008709.1 2579841 2582516 D TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: ilo:IL1533 aconitase A; aconitate hydratase 1 2579841..2582516 Psychromonas ingrahamii 37 4623977 YP_943465.1 CDS Ping_2121 NC_008709.1 2583236 2583949 D hypothetical protein 2583236..2583949 Psychromonas ingrahamii 37 4623978 YP_943466.1 CDS Ping_2122 NC_008709.1 2584419 2586734 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pfl:PFL_0293 molybdopterin oxidoreductase, alpha subunit, putative; oxidoreductase alpha (molybdopterin) subunit complement(2584419..2586734) Psychromonas ingrahamii 37 4623979 YP_943467.1 CDS Ping_2123 NC_008709.1 2586744 2587703 R PFAM: formate dehydrogenase, subunit FdhD; KEGG: rxy:Rxyl_0145 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase subunit FdhD complement(2586744..2587703) Psychromonas ingrahamii 37 4623980 YP_943468.1 CDS Ping_2124 NC_008709.1 2588484 2589215 R KEGG: pcr:Pcryo_1811 hypothetical protein; hypothetical protein complement(2588484..2589215) Psychromonas ingrahamii 37 4623981 YP_943469.1 CDS Ping_2125 NC_008709.1 2589212 2590942 R KEGG: pcr:Pcryo_1812 hypothetical protein; hypothetical protein complement(2589212..2590942) Psychromonas ingrahamii 37 4623982 YP_943470.1 CDS Ping_2126 NC_008709.1 2591049 2592650 R PFAM: BCCT transporter; KEGG: pcr:Pcryo_1813 BCCT transporter; BCCT transporter complement(2591049..2592650) Psychromonas ingrahamii 37 4623983 YP_943471.1 CDS Ping_2127 NC_008709.1 2592768 2593757 R PFAM: peptidase M19, renal dipeptidase; KEGG: pcr:Pcryo_1814 peptidase M19, renal dipeptidase; peptidase M19 complement(2592768..2593757) Psychromonas ingrahamii 37 4623984 YP_943472.1 CDS Ping_2128 NC_008709.1 2593814 2595274 R PFAM: aldehyde dehydrogenase; KEGG: pcr:Pcryo_1815 aldehyde dehydrogenase; aldehyde dehydrogenase complement(2593814..2595274) Psychromonas ingrahamii 37 4623985 YP_943473.1 CDS Ping_2129 NC_008709.1 2595391 2595789 R PFAM: Endoribonuclease L-PSP; KEGG: pcr:Pcryo_1816 Endoribonuclease L-PSP; endoribonuclease L-PSP complement(2595391..2595789) Psychromonas ingrahamii 37 4623986 YP_943474.1 CDS Ping_2130 NC_008709.1 2595956 2596846 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pcr:Pcryo_1817 transcriptional regulator, LysR family; LysR family transcriptional regulator 2595956..2596846 Psychromonas ingrahamii 37 4623987 YP_943475.1 CDS Ping_2132 NC_008709.1 2598177 2599568 D PFAM: major facilitator superfamily MFS_1; KEGG: pat:Patl_2329 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2598177..2599568 Psychromonas ingrahamii 37 4623989 YP_943476.1 CDS Ping_2133 NC_008709.1 2600494 2601435 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: atc:AGR_L_1616 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase 2600494..2601435 Psychromonas ingrahamii 37 4623990 YP_943477.1 CDS Ping_2134 NC_008709.1 2601751 2602389 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: vpa:VP0112 methyltransferase-related protein; type 11 methyltransferase 2601751..2602389 Psychromonas ingrahamii 37 4623991 YP_943478.1 CDS Ping_2135 NC_008709.1 2602673 2603224 R hypothetical protein complement(2602673..2603224) Psychromonas ingrahamii 37 4623992 YP_943479.1 CDS Ping_2136 NC_008709.1 2603227 2603961 R hypothetical protein complement(2603227..2603961) Psychromonas ingrahamii 37 4623993 YP_943480.1 CDS Ping_2137 NC_008709.1 2604080 2605006 R KEGG: bfs:BF2833 hypothetical protein; hypothetical protein complement(2604080..2605006) Psychromonas ingrahamii 37 4625923 YP_943481.1 CDS Ping_2138 NC_008709.1 2605833 2606576 R PFAM: EAL domain protein; KEGG: pol:Bpro_2469 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain); cyclic-di-GMP regulatory protein complement(2605833..2606576) Psychromonas ingrahamii 37 4625924 YP_943482.1 CDS Ping_2139 NC_008709.1 2606576 2607043 R PFAM: response regulator receiver; KEGG: pol:Bpro_2469 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain); CheY-like chemotaxis protein, response regulator receiver complement(2606576..2607043) Psychromonas ingrahamii 37 4625925 YP_943483.1 CDS Ping_2140 NC_008709.1 2607030 2609678 R KEGG: pol:Bpro_2468 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART: PAS domain containing protein; bifunctional multi-sensor protein complement(2607030..2609678) Psychromonas ingrahamii 37 4625926 YP_943484.1 CDS Ping_2141 NC_008709.1 2610830 2610970 D KEGG: wsu:WS1744 alkyl hydroperoxide reductase; hypothetical protein 2610830..2610970 Psychromonas ingrahamii 37 4625927 YP_943485.1 CDS Ping_2142 NC_008709.1 2611328 2613502 D KEGG: syf:Synpcc7942_1656 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 2611328..2613502 Psychromonas ingrahamii 37 4625928 YP_943486.1 CDS Ping_2143 NC_008709.1 2613726 2615999 R KEGG: pat:Patl_2584 hypothetical protein; hypothetical protein complement(2613726..2615999) Psychromonas ingrahamii 37 4625929 YP_943487.1 CDS Ping_2144 NC_008709.1 2616617 2618158 D PFAM: peptidase M6, immune inhibitor A; KEGG: sma:SAV1180 protease; peptidase M6, immune inhibitor A 2616617..2618158 Psychromonas ingrahamii 37 4625930 YP_943488.1 CDS Ping_2146 NC_008709.1 2618403 2618765 D hypothetical protein 2618403..2618765 Psychromonas ingrahamii 37 4625932 YP_943489.1 CDS Ping_2147 NC_008709.1 2619062 2619490 D hypothetical protein 2619062..2619490 Psychromonas ingrahamii 37 4625933 YP_943490.1 CDS Ping_2148 NC_008709.1 2619964 2620335 D hypothetical protein 2619964..2620335 Psychromonas ingrahamii 37 4625934 YP_943491.1 CDS Ping_2149 NC_008709.1 2620649 2621494 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: vfi:VFA0117 transporter, drug/metabolite exporter family; hypothetical protein complement(2620649..2621494) Psychromonas ingrahamii 37 4625935 YP_943492.1 CDS Ping_2150 NC_008709.1 2622012 2623004 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tdn:Tmden_0218 diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(2622012..2623004) Psychromonas ingrahamii 37 4625936 YP_943493.1 CDS Ping_2151 NC_008709.1 2624728 2626413 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2624728..2626413 Psychromonas ingrahamii 37 4625937 YP_943494.1 CDS Ping_2152 NC_008709.1 2626719 2628290 R PFAM: GTP-binding protein, HSR1-related; KEGG: ppr:PBPRA1571 hypothetical protein; HSR1-like GTP-binding protein complement(2626719..2628290) Psychromonas ingrahamii 37 4625938 YP_943495.1 CDS Ping_2153 NC_008709.1 2628283 2629374 R KEGG: ppr:PBPRA1570 hypothetical protein; kinase complement(2628283..2629374) Psychromonas ingrahamii 37 4625939 YP_943496.1 CDS Ping_2154 NC_008709.1 2630156 2631838 D KEGG: vvy:VV2067 predicted signal transduction protein; TIGRFAM: PAS sensor protein; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; sensor histidine kinase 2630156..2631838 Psychromonas ingrahamii 37 4625940 YP_943497.1 CDS Ping_2155 NC_008709.1 2632062 2632985 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: pat:Patl_0774 protein of unknown function DUF6, transmembrane; hypothetical protein complement(2632062..2632985) Psychromonas ingrahamii 37 4625941 YP_943498.1 CDS Ping_2157 NC_008709.1 2634320 2634694 R hypothetical protein complement(2634320..2634694) Psychromonas ingrahamii 37 4625943 YP_943499.1 CDS Ping_2158 NC_008709.1 2635496 2635705 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3558 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2635496..2635705 Psychromonas ingrahamii 37 4625944 YP_943500.1 CDS Ping_2160 NC_008709.1 2637096 2638028 D PFAM: homocysteine S-methyltransferase; KEGG: pfo:Pfl_2779 homocysteine S-methyltransferase; homocysteine S-methyltransferase 2637096..2638028 Psychromonas ingrahamii 37 4625946 YP_943501.1 CDS Ping_2161 NC_008709.1 2638079 2638678 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: xcb:XC_2820 glutathione S-transferase; glutathione S-transferase complement(2638079..2638678) Psychromonas ingrahamii 37 4625947 YP_943502.1 CDS Ping_2162 NC_008709.1 2638917 2639354 R SMART: Tetratricopeptide domain protein; KEGG: lipoprotein, putative; hypothetical protein complement(2638917..2639354) Psychromonas ingrahamii 37 4625948 YP_943503.1 CDS Ping_2163 NC_008709.1 2639362 2641560 R KEGG: psb:Psyr_0842 penicillin binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1B complement(2639362..2641560) Psychromonas ingrahamii 37 4625949 YP_943504.1 CDS Ping_2164 NC_008709.1 2641901 2642965 R KEGG: hch:HCH_02452 molybdate ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(2641901..2642965) Psychromonas ingrahamii 37 4625950 YP_943505.1 CDS Ping_2165 NC_008709.1 2642958 2643644 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP0456 probable molybdenum ABC transporter, permease protein (ModB); molybdate ABC transporter inner membrane subunit complement(2642958..2643644) Psychromonas ingrahamii 37 4625951 YP_943506.1 CDS Ping_2166 NC_008709.1 2643634 2644401 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: sde:Sde_2846 ABC-type molybdate transport system permease component-like; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2643634..2644401) Psychromonas ingrahamii 37 4625952 YP_943507.1 CDS Ping_2167 NC_008709.1 2644392 2644838 R PFAM: molybdopterin biosynthesis MoaE; KEGG: sdn:Sden_0104 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE complement(2644392..2644838) Psychromonas ingrahamii 37 4625953 YP_943508.1 CDS Ping_2168 NC_008709.1 2644841 2645092 R PFAM: thiamineS protein; KEGG: stm:STM0805 molybdopterin biosynthesis protein; molybdopterin converting factor subunit 1 complement(2644841..2645092) Psychromonas ingrahamii 37 4625954 YP_943509.1 CDS Ping_2169 NC_008709.1 2645103 2645582 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: son:SO4451 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C complement(2645103..2645582) Psychromonas ingrahamii 37 4625955 YP_943510.1 CDS Ping_2170 NC_008709.1 2645705 2646220 R TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: vch:VC1025 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B complement(2645705..2646220) Psychromonas ingrahamii 37 4625325 YP_943511.1 CDS Ping_2171 NC_008709.1 2646223 2646810 R KEGG: xcv:XCV2084 hypothetical protein; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(2646223..2646810) Psychromonas ingrahamii 37 4625326 YP_943512.1 CDS napC NC_008709.1 2646903 2647478 R PFAM: NapC/NirT cytochrome c domain protein; KEGG: vfi:VF1903 cytochrome c-type protein NapC; nitrate reductase periplasmic cytochrome c-type protein NapC complement(2646903..2647478) Psychromonas ingrahamii 37 4625327 YP_943513.1 CDS napB NC_008709.1 2647497 2647961 R PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: ppr:PBPRA0854 putative periplasmic nitrate reductase,cytochrome c-type protein; nitrate reductase periplasmic cytochrome c-type subunit NapB complement(2647497..2647961) Psychromonas ingrahamii 37 4625328 YP_943514.1 CDS Ping_2174 NC_008709.1 2648073 2650568 R periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit complement(2648073..2650568) Psychromonas ingrahamii 37 4625329 YP_943515.1 CDS napD NC_008709.1 2650630 2650890 R PFAM: NapD family protein; KEGG: vpa:VPA1198 NapD protein; nitrate reductase accessory periplasmic protein NapD complement(2650630..2650890) Psychromonas ingrahamii 37 4625330 YP_943516.1 CDS Ping_2176 NC_008709.1 2650887 2651366 R TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: vpa:VPA1197 iron-sulfur cluster-binding protein NapF; ferredoxin-type protein NapF complement(2650887..2651366) Psychromonas ingrahamii 37 4625331 YP_943517.1 CDS moaA NC_008709.1 2651806 2652825 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(2651806..2652825) Psychromonas ingrahamii 37 4625332 YP_943518.1 CDS dinG NC_008709.1 2653196 2655256 D helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 2653196..2655256 Psychromonas ingrahamii 37 4625333 YP_943519.1 CDS Ping_2179 NC_008709.1 2655256 2656035 D PFAM: protein of unknown function DUF81; KEGG: vfi:VF1008 hypothetical membrane spanning protein; hypothetical protein 2655256..2656035 Psychromonas ingrahamii 37 4625334 YP_943520.1 CDS Ping_2180 NC_008709.1 2656023 2656589 D KEGG: plu:plu3843 primosomal replication factor N''; primosomal replication protein N'' 2656023..2656589 Psychromonas ingrahamii 37 4625335 YP_943521.1 CDS Ping_2181 NC_008709.1 2656582 2656755 D KEGG: vfi:VF1006 hypothetical protein; hypothetical protein 2656582..2656755 Psychromonas ingrahamii 37 4625336 YP_943522.1 CDS Ping_2182 NC_008709.1 2656841 2657113 R PFAM: acylphosphatase; KEGG: vvy:VV1550 acylphosphatase; acylphosphatase complement(2656841..2657113) Psychromonas ingrahamii 37 4625337 YP_943523.1 CDS Ping_2183 NC_008709.1 2657197 2657817 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: csa:Csal_1537 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(2657197..2657817) Psychromonas ingrahamii 37 4625338 YP_943524.1 CDS Ping_2184 NC_008709.1 2658038 2659423 R KEGG: pmu:PM0945 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; cysteinyl-tRNA synthetase complement(2658038..2659423) Psychromonas ingrahamii 37 4625339 YP_943525.1 CDS Ping_2185 NC_008709.1 2659574 2660068 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: ppr:PBPRA1097 putative peptidyl-prolyl cis-trans isomerase B; peptidyl-prolyl isomerase 2659574..2660068 Psychromonas ingrahamii 37 4625340 YP_943526.1 CDS Ping_2186 NC_008709.1 2660088 2660825 D TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: stt:t2326 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 2660088..2660825 Psychromonas ingrahamii 37 4625341 YP_943527.1 CDS Ping_2187 NC_008709.1 2660945 2662939 R Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease complement(2660945..2662939) Psychromonas ingrahamii 37 4625342 YP_943528.1 CDS Ping_2188 NC_008709.1 2662950 2663573 R affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector complement(2662950..2663573) Psychromonas ingrahamii 37 4625343 YP_943529.1 CDS Ping_2189 NC_008709.1 2663880 2665223 D PFAM: peptidase U32; KEGG: son:SO1252 peptidase, U32 family; peptidase U32 2663880..2665223 Psychromonas ingrahamii 37 4625659 YP_943530.1 CDS Ping_2190 NC_008709.1 2665226 2665471 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: ppr:PBPRA0716 putative ferredoxin; 4Fe-4S ferredoxin 2665226..2665471 Psychromonas ingrahamii 37 4625660 YP_943531.1 CDS Ping_2191 NC_008709.1 2665511 2666839 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sdn:Sden_2374 MATE efflux family protein; MATE efflux family protein 2665511..2666839 Psychromonas ingrahamii 37 4625661 YP_943532.1 CDS Ping_2192 NC_008709.1 2667060 2668679 D PFAM: extracellular solute-binding protein, family 5; KEGG: pat:Patl_3006 extracellular solute-binding protein, family 5; peptide ABC transporter extracellular solute-binding protein 2667060..2668679 Psychromonas ingrahamii 37 4625662 YP_943533.1 CDS Ping_2193 NC_008709.1 2668682 2669650 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: plu:plu2588 peptide transport system permease protein SapB; peptide ABC transporter protein inner membrane binding component 2668682..2669650 Psychromonas ingrahamii 37 4625663 YP_943534.1 CDS sapC NC_008709.1 2669637 2670527 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRA2443 putative peptide ABC transporter, permease protein; peptide ABC transporter protein inner membrane binding component SapC 2669637..2670527 Psychromonas ingrahamii 37 4625664 YP_943535.1 CDS Ping_2195 NC_008709.1 2670527 2671537 D KEGG: ppr:PBPRA2444 putative peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; ABC oligopeptide/dipeptide transporter ATP-binding protein 2670527..2671537 Psychromonas ingrahamii 37 4625665 YP_943536.1 CDS Ping_2196 NC_008709.1 2671534 2672313 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sdn:Sden_2486 ABC transporter related; ABC transporter ATP-binding protein 2671534..2672313 Psychromonas ingrahamii 37 4625666 YP_943537.1 CDS Ping_2197 NC_008709.1 2672598 2674469 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pha:PSHAa1106 hypothetical protein; diguanylate cyclase/phosphodiesterase 2672598..2674469 Psychromonas ingrahamii 37 4625231 YP_943538.1 CDS Ping_2198 NC_008709.1 2674590 2675519 D PFAM: PP-loop domain protein; KEGG: vch:VC1432 hypothetical protein; PP-loop domain-containing protein 2674590..2675519 Psychromonas ingrahamii 37 4625232 YP_943539.1 CDS tpiA NC_008709.1 2675712 2676464 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2675712..2676464 Psychromonas ingrahamii 37 4625233 YP_943540.1 CDS Ping_2200 NC_008709.1 2676693 2677352 D PFAM: protein of unknown function UPF0005; KEGG: cps:CPS_2350 putative membrane protein; hypothetical protein 2676693..2677352 Psychromonas ingrahamii 37 4625234 YP_943541.1 CDS Ping_2201 NC_008709.1 2678172 2679413 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: vfi:VFA0464 lipoprotein releasing system transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family protein complement(2678172..2679413) Psychromonas ingrahamii 37 4625235 YP_943542.1 CDS Ping_2202 NC_008709.1 2679413 2680096 R KEGG: vch:VC1883 ABC transporter, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein complement(2679413..2680096) Psychromonas ingrahamii 37 4625236 YP_943543.1 CDS Ping_2203 NC_008709.1 2680089 2681315 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: ppr:PBPRA2390 putative ABC transporter integral membrane subunit; lipoprotein releasing system, transmembrane protein, LolC/E family protein complement(2680089..2681315) Psychromonas ingrahamii 37 4623840 YP_943544.1 CDS Ping_2204 NC_008709.1 2681598 2685089 D KEGG: pat:Patl_1725 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor 2681598..2685089 Psychromonas ingrahamii 37 4623841 YP_943545.1 CDS Ping_2205 NC_008709.1 2685094 2685858 D KEGG: vch:VC1887 hypothetical protein; hypothetical protein 2685094..2685858 Psychromonas ingrahamii 37 4623842 YP_943546.1 CDS Ping_2206 NC_008709.1 2685914 2686597 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cps:CPS_2291 HAD-superfamily hydrolase, subfamily IA; HAD family hydrolase complement(2685914..2686597) Psychromonas ingrahamii 37 4623843 YP_943547.1 CDS Ping_2207 NC_008709.1 2686744 2687682 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: hit:NTHI0536 ribosomal large subunit pseudouridine synthase C; RluA family pseudouridine synthase complement(2686744..2687682) Psychromonas ingrahamii 37 4623844 YP_943548.1 CDS Ping_2208 NC_008709.1 2688014 2691211 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: son:SO2785 ribonuclease E; Rne/Rng family ribonuclease protein 2688014..2691211 Psychromonas ingrahamii 37 4623845 YP_943549.1 CDS Ping_2209 NC_008709.1 2691350 2692300 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vfi:VF0902 thioredoxin reductase; thioredoxin reductase 2691350..2692300 Psychromonas ingrahamii 37 4623846 YP_943550.1 CDS Ping_2210 NC_008709.1 2692387 2693304 R lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI complement(2692387..2693304) Psychromonas ingrahamii 37 4623847 YP_943551.1 CDS secF NC_008709.1 2693427 2694371 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(2693427..2694371) Psychromonas ingrahamii 37 4623848 YP_943552.1 CDS Ping_2212 NC_008709.1 2694386 2696248 R TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: vpa:VP0590 protein-export membrane protein SecD; protein-export membrane protein SecD complement(2694386..2696248) Psychromonas ingrahamii 37 4623849 YP_943553.1 CDS Ping_2213 NC_008709.1 2696342 2696674 R TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ppr:PBPRA0744 conserved hypothetical protein; preprotein translocase subunit YajC complement(2696342..2696674) Psychromonas ingrahamii 37 4623850 YP_943554.1 CDS Ping_2214 NC_008709.1 2696726 2697850 R KEGG: yps:YPTB0928 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(2696726..2697850) Psychromonas ingrahamii 37 4623851 YP_943555.1 CDS Ping_2215 NC_008709.1 2697979 2699034 R TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: vfi:VF1970 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA-ribosyltransferase- isomerase complement(2697979..2699034) Psychromonas ingrahamii 37 4623852 YP_943556.1 CDS Ping_2216 NC_008709.1 2699294 2699650 R TIGRFAM: ribosomal protein L20; KEGG: vpa:VP1282 large subunit ribosomal protein L20; 50S ribosomal protein L20 complement(2699294..2699650) Psychromonas ingrahamii 37 4623853 YP_943557.1 CDS Ping_2217 NC_008709.1 2699665 2699949 R PFAM: ribosomal protein L35; KEGG: tcx:Tcr_1665 ribosomal protein L35; 50S ribosomal protein L35 complement(2699665..2699949) Psychromonas ingrahamii 37 4623854 YP_943558.1 CDS Ping_2218 NC_008709.1 2699961 2700509 R TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: hin:HI1318m translation initiation factor IF-3; translation initiation factor IF-3 complement(2699961..2700509) Psychromonas ingrahamii 37 4623855 YP_943559.1 CDS Ping_2219 NC_008709.1 2700524 2702431 R TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase, SAD; KEGG: pha:PSHAa1396 threonyl-tRNA synthetase; threonyl-tRNA synthetase complement(2700524..2702431) Psychromonas ingrahamii 37 4623856 YP_943560.1 CDS Ping_2220 NC_008709.1 2702632 2702847 R PFAM: YebG family protein; KEGG: sdn:Sden_1719 YebG; hypothetical protein complement(2702632..2702847) Psychromonas ingrahamii 37 4623857 YP_943561.1 CDS Ping_2221 NC_008709.1 2703033 2703629 D PFAM: Paraquat-inducible protein A; KEGG: vfi:VF1276 paraquat-inducible protein A; paraquat-inducible protein A 2703033..2703629 Psychromonas ingrahamii 37 4624399 YP_943562.1 CDS Ping_2222 NC_008709.1 2703619 2704242 D PFAM: Paraquat-inducible protein A; KEGG: ppr:PBPRA1925 hypothetical uncharacterized paraquat-inducible protein A; paraquat-inducible protein A 2703619..2704242 Psychromonas ingrahamii 37 4624400 YP_943563.1 CDS Ping_2223 NC_008709.1 2704242 2706914 D PFAM: Mammalian cell entry related domain protein; KEGG: vfi:VF1275 paraquat-inducible protein B; hypothetical protein 2704242..2706914 Psychromonas ingrahamii 37 4624401 YP_943564.1 CDS yebU NC_008709.1 2706992 2708437 D in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2706992..2708437 Psychromonas ingrahamii 37 4624402 YP_943565.1 CDS Ping_2225 NC_008709.1 2708519 2709283 D PFAM: protein of unknown function DUF218; KEGG: vvy:VV2302 hypothetical protein; hypothetical protein 2708519..2709283 Psychromonas ingrahamii 37 4624403 YP_943566.1 CDS Ping_2226 NC_008709.1 2709363 2709539 R KEGG: cac:CAC1955 hypothetical protein; hypothetical protein complement(2709363..2709539) Psychromonas ingrahamii 37 4624404 YP_943567.1 CDS thiI NC_008709.1 2709767 2711221 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(2709767..2711221) Psychromonas ingrahamii 37 4624405 YP_943568.1 CDS Ping_2228 NC_008709.1 2711379 2711918 R PFAM: YaeQ family protein; KEGG: pat:Patl_3118 YaeQ; YaeQ family protein complement(2711379..2711918) Psychromonas ingrahamii 37 4624406 YP_943569.1 CDS Ping_2229 NC_008709.1 2711987 2713093 R TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: hin:HI0987 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(2711987..2713093) Psychromonas ingrahamii 37 4624407 YP_943570.1 CDS Ping_2230 NC_008709.1 2713218 2713973 R PFAM: protein of unknown function DUF34; KEGG: ppr:PBPRA1042 hypothetical protein; hypothetical protein complement(2713218..2713973) Psychromonas ingrahamii 37 4624408 YP_943571.1 CDS Ping_2231 NC_008709.1 2714062 2715384 R TIGRFAM: Lantibiotic regulatory protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: vpa:VP0570 histidine protein kinase PhoR; sensor histidine kinase complement(2714062..2715384) Psychromonas ingrahamii 37 4624409 YP_943572.1 CDS Ping_2232 NC_008709.1 2715549 2716232 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ppr:PBPRA0721 putative DNA-binding response regulator PhoB; winged helix family two component transcriptional regulator complement(2715549..2716232) Psychromonas ingrahamii 37 4624410 YP_943573.1 CDS rdgC NC_008709.1 2716495 2717403 D Required for efficient pilin antigenic variation; recombination associated protein 2716495..2717403 Psychromonas ingrahamii 37 4624411 YP_943574.1 CDS Ping_2234 NC_008709.1 2717843 2719033 D TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; KEGG: ppr:PBPRA1685 putative phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 2717843..2719033 Psychromonas ingrahamii 37 4624412 YP_943575.1 CDS Ping_2235 NC_008709.1 2719219 2719629 D KEGG: pae:PA3008 hypothetical protein; hypothetical protein 2719219..2719629 Psychromonas ingrahamii 37 4624413 YP_943576.1 CDS Ping_2236 NC_008709.1 2719739 2719939 D KEGG: vfi:VF0662 hypothetical protein; hypothetical protein 2719739..2719939 Psychromonas ingrahamii 37 4624414 YP_943577.1 CDS Ping_2237 NC_008709.1 2720143 2720994 R PFAM: protein of unknown function RIO1; KEGG: ppr:PBPRA1235 putative RIO1/ZK632.3/MJ0444 family protein; hypothetical protein complement(2720143..2720994) Psychromonas ingrahamii 37 4624415 YP_943578.1 CDS Ping_2238 NC_008709.1 2721589 2721825 D TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: ppr:PBPRA0807 putative exodeoxyribonuclease, small subunit; exodeoxyribonuclease VII small subunit 2721589..2721825 Psychromonas ingrahamii 37 4623446 YP_943579.1 CDS Ping_2239 NC_008709.1 2721918 2722808 D PFAM: Polyprenyl synthetase; KEGG: vch:VC0890 geranyltranstransferase; geranyltranstransferase 2721918..2722808 Psychromonas ingrahamii 37 4623447 YP_943580.1 CDS Ping_2240 NC_008709.1 2722889 2724757 D TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, central region; Transketolase domain protein; KEGG: vpa:VP0686 1-deoxyxylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase 2722889..2724757 Psychromonas ingrahamii 37 4623448 YP_943581.1 CDS Ping_2241 NC_008709.1 2724929 2725936 R KEGG: sgl:SG0654 thiamin-monophosphate kinase ThiL; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(2724929..2725936) Psychromonas ingrahamii 37 4623449 YP_943582.1 CDS Ping_2242 NC_008709.1 2725933 2726889 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_0916 RNA pseudouridine synthase family protein; pseudouridine synthase complement(2725933..2726889) Psychromonas ingrahamii 37 4623450 YP_943583.1 CDS Ping_2243 NC_008709.1 2728494 2728838 D KEGG: cps:CPS_3339 hypothetical protein; hypothetical protein 2728494..2728838 Psychromonas ingrahamii 37 4623453 YP_943584.1 CDS Ping_2244 NC_008709.1 2728967 2729305 D KEGG: vfi:VF0654 hypothetical protein; hypothetical protein 2728967..2729305 Psychromonas ingrahamii 37 4623454 YP_943585.1 CDS Ping_2245 NC_008709.1 2729540 2730469 D KEGG: abo:ABO_1396 hypothetical protein; hypothetical protein 2729540..2730469 Psychromonas ingrahamii 37 4623455 YP_943586.1 CDS Ping_2246 NC_008709.1 2730716 2731693 R KEGG: vfi:VFA0558 coproporphyrinogen III oxidase; coproporphyrinogen III oxidase complement(2730716..2731693) Psychromonas ingrahamii 37 4623456 YP_943587.1 CDS Ping_2247 NC_008709.1 2731972 2732205 R KEGG: sde:Sde_3925 hypothetical protein; hypothetical protein complement(2731972..2732205) Psychromonas ingrahamii 37 4623457 YP_943588.1 CDS Ping_2248 NC_008709.1 2732349 2732756 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vvy:VVA1157 lactoylglutathione lyase; bleomycin resistance protein complement(2732349..2732756) Psychromonas ingrahamii 37 4623458 YP_943589.1 CDS Ping_2249 NC_008709.1 2733371 2734243 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: ppr:PBPRA1051 putative succinyl-CoA synthase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(2733371..2734243) Psychromonas ingrahamii 37 4623459 YP_943590.1 CDS Ping_2250 NC_008709.1 2734243 2735409 R KEGG: ppr:PBPRA1050 putative succinyl-CoA synthase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta complement(2734243..2735409) Psychromonas ingrahamii 37 4623460 YP_943591.1 CDS Ping_2251 NC_008709.1 2735542 2736741 R TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: vvy:VV1033 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(2735542..2736741) Psychromonas ingrahamii 37 4623461 YP_943592.1 CDS Ping_2252 NC_008709.1 2736800 2739607 R KEGG: ppr:PBPRA1048 putative 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; Transketolase, central region; 2-oxoglutarate dehydrogenase, E1 subunit complement(2736800..2739607) Psychromonas ingrahamii 37 4623462 YP_943593.1 CDS sucA NC_008709.1 2739655 2740368 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: pat:Patl_1798 succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase catalytic subunit complement(2739655..2740368) Psychromonas ingrahamii 37 4623463 YP_943594.1 CDS sdhA NC_008709.1 2740382 2742148 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2740382..2742148) Psychromonas ingrahamii 37 4623464 YP_943595.1 CDS Ping_2255 NC_008709.1 2742150 2742494 R KEGG: vch:VC2090 succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein complement(2742150..2742494) Psychromonas ingrahamii 37 4627184 YP_943596.1 CDS Ping_2256 NC_008709.1 2742488 2742922 R PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: vfi:VF0819 succinate dehydrogenase cytochrome b556 subunit; succinate dehydrogenase, cytochrome b subunit complement(2742488..2742922) Psychromonas ingrahamii 37 4627185 YP_943597.1 CDS Ping_2257 NC_008709.1 2743829 2745124 D KEGG: son:SO1926 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 2743829..2745124 Psychromonas ingrahamii 37 4627186 YP_943598.1 CDS aat NC_008709.1 2745341 2746057 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2745341..2746057 Psychromonas ingrahamii 37 4627187 YP_943599.1 CDS Ping_2259 NC_008709.1 2746233 2746649 R PFAM: CBS domain containing protein; KEGG: vpa:VP0958 inosine monophosphate dehydrogenase-related protein; signal transduction protein complement(2746233..2746649) Psychromonas ingrahamii 37 4627188 YP_943600.1 CDS Ping_2260 NC_008709.1 2746806 2747348 D KEGG: cps:CPS_3635 hypothetical protein; hypothetical protein 2746806..2747348 Psychromonas ingrahamii 37 4627189 YP_943601.1 CDS Ping_2261 NC_008709.1 2747462 2747944 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(2747462..2747944) Psychromonas ingrahamii 37 4627190 YP_943602.1 CDS Ping_2262 NC_008709.1 2748050 2748949 D KEGG: vvu:VV11810 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; 2-dehydropantoate 2-reductase 2748050..2748949 Psychromonas ingrahamii 37 4627191 YP_943603.1 CDS Ping_2263 NC_008709.1 2749012 2750319 R KEGG: cps:CPS_0598 putative lipoprotein; hypothetical protein complement(2749012..2750319) Psychromonas ingrahamii 37 4627192 YP_943604.1 CDS Ping_2264 NC_008709.1 2750369 2750968 R KEGG: abo:ABO_0071 hypothetical protein; hypothetical protein complement(2750369..2750968) Psychromonas ingrahamii 37 4627193 YP_943605.1 CDS Ping_2265 NC_008709.1 2751028 2751378 R PFAM: histidine triad (HIT) protein; KEGG: vch:VC1897 Hit family protein; histidine triad (HIT) protein complement(2751028..2751378) Psychromonas ingrahamii 37 4627194 YP_943606.1 CDS Ping_2266 NC_008709.1 2751451 2752320 R KEGG: pat:Patl_3377 hypothetical protein; hypothetical protein complement(2751451..2752320) Psychromonas ingrahamii 37 4627195 YP_943607.1 CDS Ping_2267 NC_008709.1 2752422 2753477 R PFAM: 37kDa nucleoid-associated protein; KEGG: vvy:VV1167 nucleoid-associated protein; 37kDa nucleoid-associated protein complement(2752422..2753477) Psychromonas ingrahamii 37 4627196 YP_943608.1 CDS Ping_2268 NC_008709.1 2753647 2753877 D PFAM: protein of unknown function DUF1414; KEGG: pha:PSHAa1818 hypothetical protein; hypothetical protein 2753647..2753877 Psychromonas ingrahamii 37 4627197 YP_943609.1 CDS Ping_2269 NC_008709.1 2753883 2755670 D PFAM: sulfatase; KEGG: vch:VC2041 hypothetical protein; sulfatase 2753883..2755670 Psychromonas ingrahamii 37 4627198 YP_943610.1 CDS Ping_2270 NC_008709.1 2756575 2758545 D Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 2756575..2758545 Psychromonas ingrahamii 37 4627200 YP_943611.1 CDS Ping_2271 NC_008709.1 2758681 2760993 D PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pha:PSHAa0508 hypothetical protein; radical SAM protein 2758681..2760993 Psychromonas ingrahamii 37 4626800 YP_943612.1 CDS Ping_2272 NC_008709.1 2761071 2761670 R KEGG: msu:MS1506 recombinational DNA repair protein; TIGRFAM: recombination protein RecR; PFAM: RecR protein; TOPRIM domain protein; SMART: Toprim sub domain protein; recombination protein RecR complement(2761071..2761670) Psychromonas ingrahamii 37 4626801 YP_943613.1 CDS Ping_2273 NC_008709.1 2762256 2762591 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_035 hypothetical protein; diguanylate cyclase complement(2762256..2762591) Psychromonas ingrahamii 37 4626802 YP_943614.1 CDS Ping_2274 NC_008709.1 2762576 2763061 R KEGG: mth:MTH356 sensory transduction histidine kinase; sensory transduction histidine kinase complement(2762576..2763061) Psychromonas ingrahamii 37 4626803 YP_943615.1 CDS Ping_2275 NC_008709.1 2763034 2763471 R hypothetical protein complement(2763034..2763471) Psychromonas ingrahamii 37 4626804 YP_943616.1 CDS Ping_2276 NC_008709.1 2763741 2764070 R PFAM: conserved hypothetical protein 103; KEGG: plu:plu3840 hypothetical protein; hypothetical protein complement(2763741..2764070) Psychromonas ingrahamii 37 4626805 YP_943617.1 CDS Ping_2277 NC_008709.1 2764117 2766441 R KEGG: ppr:PBPRA1017 hypothetical DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(2764117..2766441) Psychromonas ingrahamii 37 4626806 YP_943618.1 CDS Ping_2278 NC_008709.1 2766447 2766992 R KEGG: vch:VC1053 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase complement(2766447..2766992) Psychromonas ingrahamii 37 4626807 YP_943619.1 CDS Ping_2279 NC_008709.1 2767511 2768455 D PFAM: dihydrouridine synthase, DuS; KEGG: cps:CPS_0906 NifR3/Smm1 family protein; dihydrouridine synthase, DuS 2767511..2768455 Psychromonas ingrahamii 37 4626808 YP_943620.1 CDS Ping_2280 NC_008709.1 2768537 2770375 R KEGG: pat:Patl_1429 hypothetical protein; hypothetical protein complement(2768537..2770375) Psychromonas ingrahamii 37 4626809 YP_943621.1 CDS Ping_2281 NC_008709.1 2770376 2772292 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvy:VV1658 ABC-type transport system, ATPase component; ABC transporter ATP-binding protein complement(2770376..2772292) Psychromonas ingrahamii 37 4626810 YP_943622.1 CDS Ping_2282 NC_008709.1 2772310 2772543 R PFAM: glutaredoxin 2; KEGG: son:SO1852 hypothetical protein; glutaredoxin complement(2772310..2772543) Psychromonas ingrahamii 37 4626811 YP_943623.1 CDS rlmL NC_008709.1 2772555 2774804 R catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase complement(2772555..2774804) Psychromonas ingrahamii 37 4626812 YP_943624.1 CDS Ping_2284 NC_008709.1 2775021 2776253 R PFAM: extracellular solute-binding protein, family 1; KEGG: hch:HCH_06083 ABC-type sugar transport system, periplasmic component; sugar ABC transporter extracellular solute-binding family 1 protein complement(2775021..2776253) Psychromonas ingrahamii 37 4626813 YP_943625.1 CDS Ping_2285 NC_008709.1 2776271 2777713 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ppr:PBPRB1907 putative signal transduction histidine kinase; sensor histidine kinase complement(2776271..2777713) Psychromonas ingrahamii 37 4626814 YP_943626.1 CDS gltR NC_008709.1 2777738 2778463 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: hch:HCH_06085 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator GltR complement(2777738..2778463) Psychromonas ingrahamii 37 4626815 YP_943627.1 CDS Ping_2287 NC_008709.1 2779077 2780501 D TIGRFAM: 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III; KEGG: ppr:PBPRA2230 putative diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase; 2,4-diaminobutyrate 4-transaminase 2779077..2780501 Psychromonas ingrahamii 37 4626816 YP_943628.1 CDS Ping_2288 NC_008709.1 2780491 2781975 D PFAM: Pyridoxal-dependent decarboxylase; KEGG: ppr:PBPRA2230 putative diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase; pyridoxal-dependent decarboxylase 2780491..2781975 Psychromonas ingrahamii 37 4626817 YP_943629.1 CDS Ping_2289 NC_008709.1 2782106 2783323 D PFAM: Saccharopine dehydrogenase; KEGG: ppr:PBPRA2229 putative saccharopine dehydrogenase; saccharopine dehydrogenase 2782106..2783323 Psychromonas ingrahamii 37 4626818 YP_943630.1 CDS Ping_2290 NC_008709.1 2783399 2784529 D TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ppr:PBPRA2228 putative carboxynorspermidine decarboxylase; carboxynorspermidine decarboxylase 2783399..2784529 Psychromonas ingrahamii 37 4624608 YP_943631.1 CDS Ping_2291 NC_008709.1 2784653 2785669 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: cps:CPS_3923 sensory box/GGDEF domain protein; PAS/PAC sensor-containing diguanylate cyclase complement(2784653..2785669) Psychromonas ingrahamii 37 4624609 YP_943632.1 CDS Ping_2292 NC_008709.1 2786305 2787318 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ppr:PBPRB0795 putative threonine aldolase; threonine aldolase 2786305..2787318 Psychromonas ingrahamii 37 4624610 YP_943633.1 CDS Ping_2293 NC_008709.1 2787372 2787923 R PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: son:SO2100 thioredoxin family protein; thioredoxin family protein complement(2787372..2787923) Psychromonas ingrahamii 37 4624611 YP_943634.1 CDS Ping_2294 NC_008709.1 2788158 2789189 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2788158..2789189 Psychromonas ingrahamii 37 4624612 YP_943635.1 CDS Ping_2295 NC_008709.1 2789340 2789927 R PFAM: PhnA protein-like; KEGG: abo:ABO_2381 PhnA protein; PhnA protein-like protein complement(2789340..2789927) Psychromonas ingrahamii 37 4624613 YP_943636.1 CDS Ping_2296 NC_008709.1 2790187 2791335 D PFAM: methyltransferase small; Methyltransferase type 12; KEGG: pha:PSHAa2245 ribosomal RNA small subunit methyltransferase D; rRNA (guanine-N(2)-)-methyltransferase 2790187..2791335 Psychromonas ingrahamii 37 4624614 YP_943637.1 CDS Ping_2297 NC_008709.1 2791474 2792859 R PFAM: sodium:neurotransmitter symporter; KEGG: ilo:IL1275 Na+-dependent transporter of the SNF family; Na+-dependent transporter of the SNF family protein complement(2791474..2792859) Psychromonas ingrahamii 37 4624615 YP_943638.1 CDS Ping_2298 NC_008709.1 2793121 2793687 R KEGG: vpa:VP1599 hypothetical protein; hypothetical protein complement(2793121..2793687) Psychromonas ingrahamii 37 4624616 YP_943639.1 CDS Ping_2299 NC_008709.1 2793737 2794747 R PFAM: dihydroorotate dehydrogenase; KEGG: ppr:PBPRA1767 dihydroorotate dehydrogenase; dihydroorotate oxidase complement(2793737..2794747) Psychromonas ingrahamii 37 4624617 YP_943640.1 CDS Ping_2300 NC_008709.1 2795148 2795936 R KEGG: pcu:pc1824 hypothetical protein; hypothetical protein complement(2795148..2795936) Psychromonas ingrahamii 37 4624618 YP_943641.1 CDS Ping_2301 NC_008709.1 2795988 2796701 R PFAM: peptidase M22, glycoprotease; KEGG: pat:Patl_2808 peptidase M22, glycoprotease; peptidase M22, glycoprotease complement(2795988..2796701) Psychromonas ingrahamii 37 4624619 YP_943642.1 CDS Ping_2302 NC_008709.1 2796802 2798790 R SMART: helicase c2; KEGG: ppr:PBPRA1070 putative ATP-dependent helicase, DinG family; ATP-dependent helicase, DinG family protein complement(2796802..2798790) Psychromonas ingrahamii 37 4624620 YP_943643.1 CDS Ping_2303 NC_008709.1 2799816 2800214 D KEGG: vvy:VVA0912 hypothetical protein; hypothetical protein 2799816..2800214 Psychromonas ingrahamii 37 4624621 YP_943644.1 CDS Ping_2304 NC_008709.1 2800502 2800771 R hypothetical protein complement(2800502..2800771) Psychromonas ingrahamii 37 4624622 YP_943645.1 CDS Ping_2305 NC_008709.1 2800817 2801692 R KEGG: dar:Daro_1916 putative nucleotide-binding protein containing TIR-like domain; nucleic acid-binding protein complement(2800817..2801692) Psychromonas ingrahamii 37 4624623 YP_943646.1 CDS Ping_2306 NC_008709.1 2801834 2803348 R KEGG: rpd:RPD_2339 hypothetical protein; hypothetical protein complement(2801834..2803348) Psychromonas ingrahamii 37 4624624 YP_943647.1 CDS Ping_2307 NC_008709.1 2804614 2805594 R PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568; hypothetical protein complement(2804614..2805594) Psychromonas ingrahamii 37 4624625 YP_943648.1 CDS Ping_2308 NC_008709.1 2805863 2808262 R KEGG: noc:Noc_0226 PAS sensor diguanylate cyclase and phophodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(2805863..2808262) Psychromonas ingrahamii 37 4624626 YP_943649.1 CDS Ping_2309 NC_008709.1 2808351 2809163 R PFAM: alpha/beta hydrolase fold; KEGG: bsu:BG12442 similar to hydrolase; alpha/beta hydrolase fold protein complement(2808351..2809163) Psychromonas ingrahamii 37 4624104 YP_943650.1 CDS Ping_2310 NC_008709.1 2809666 2810331 R PFAM: Peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(2809666..2810331) Psychromonas ingrahamii 37 4624105 YP_943651.1 CDS Ping_2311 NC_008709.1 2811053 2811340 D KEGG: sdn:Sden_1783 hypothetical protein; hypothetical protein 2811053..2811340 Psychromonas ingrahamii 37 4624106 YP_943652.1 CDS Ping_2312 NC_008709.1 2811809 2813392 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: pat:Patl_1434 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase complement(2811809..2813392) Psychromonas ingrahamii 37 4624107 YP_943653.1 CDS ohR NC_008709.1 2813522 2813965 R PFAM: regulatory protein, MarR; KEGG: ppr:PBPRB1176 hypothetical transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2813522..2813965) Psychromonas ingrahamii 37 4624108 YP_943654.1 CDS Ping_2314 NC_008709.1 2814103 2814525 D PFAM: OsmC family protein; KEGG: ppr:PBPRB1177 putative organic hydroperoxide resistance protein; OsmC family protein 2814103..2814525 Psychromonas ingrahamii 37 4624109 YP_943655.1 CDS Ping_2315 NC_008709.1 2814711 2815490 R KEGG: csa:Csal_2382 hypothetical protein; hypothetical protein complement(2814711..2815490) Psychromonas ingrahamii 37 4624110 YP_943656.1 CDS Ping_2316 NC_008709.1 2815707 2816603 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ccr:CC1117 transcriptional regulator, LysR family; LysR family transcriptional regulator 2815707..2816603 Psychromonas ingrahamii 37 4624111 YP_943657.1 CDS Ping_2317 NC_008709.1 2817086 2818483 R KEGG: bte:BTH_II1774 serine protease, subtilase family; hypothetical protein complement(2817086..2818483) Psychromonas ingrahamii 37 4624112 YP_943658.1 CDS Ping_2318 NC_008709.1 2819297 2819560 R KEGG: tcx:Tcr_1766 hypothetical protein; hypothetical protein complement(2819297..2819560) Psychromonas ingrahamii 37 4624113 YP_943659.1 CDS Ping_2319 NC_008709.1 2819630 2820973 R KEGG: tcx:Tcr_1765 hypothetical protein; hypothetical protein complement(2819630..2820973) Psychromonas ingrahamii 37 4624114 YP_943660.1 CDS Ping_2320 NC_008709.1 2821033 2821839 R PFAM: Phosphoglycerate mutase; KEGG: tcx:Tcr_1764 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase complement(2821033..2821839) Psychromonas ingrahamii 37 4624115 YP_943661.1 CDS Ping_2321 NC_008709.1 2821864 2822958 R KEGG: tcx:Tcr_1769 HPr kinase; HPr kinase complement(2821864..2822958) Psychromonas ingrahamii 37 4624116 YP_943662.1 CDS Ping_2322 NC_008709.1 2823083 2823973 R PFAM: RimK domain protein ATP-grasp; KEGG: tcx:Tcr_1768 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)-like; RimK domain-containing protein ATP-grasp complement(2823083..2823973) Psychromonas ingrahamii 37 4624117 YP_943663.1 CDS Ping_2323 NC_008709.1 2823966 2825609 R KEGG: tcx:Tcr_1767 hypothetical protein; hypothetical protein complement(2823966..2825609) Psychromonas ingrahamii 37 4627109 YP_943664.1 CDS Ping_2324 NC_008709.1 2825759 2826001 R hypothetical protein complement(2825759..2826001) Psychromonas ingrahamii 37 4627110 YP_943665.1 CDS Ping_2325 NC_008709.1 2826154 2826651 D PFAM: beta-Ig-H3/fasciclin; KEGG: rde:RD1_0722 hypothetical protein; beta-Ig-H3/fasciclin 2826154..2826651 Psychromonas ingrahamii 37 4627111 YP_943666.1 CDS Ping_2327 NC_008709.1 2828264 2829526 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: syf:Synpcc7942_0390 chromate transporter; chromate transporter 2828264..2829526 Psychromonas ingrahamii 37 4627113 YP_943667.1 CDS Ping_2328 NC_008709.1 2829603 2830610 D PFAM: sulfotransferase; KEGG: fra:Francci3_1774 sulfotransferase domain protein; sulfotransferase 2829603..2830610 Psychromonas ingrahamii 37 4627114 YP_943668.1 CDS Ping_2329 NC_008709.1 2830978 2831238 R hypothetical protein complement(2830978..2831238) Psychromonas ingrahamii 37 4627115 YP_943669.1 CDS Ping_2330 NC_008709.1 2832251 2832445 R KEGG: atc:AGR_L_17 hypothetical protein; hypothetical protein complement(2832251..2832445) Psychromonas ingrahamii 37 4627116 YP_943670.1 CDS Ping_2331 NC_008709.1 2833368 2835197 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ava:Ava_1955 ABC transporter, transmembrane region; ABC-type multidrug/protein/lipid transport system ATP-binding protein 2833368..2835197 Psychromonas ingrahamii 37 4627117 YP_943671.1 CDS Ping_2332 NC_008709.1 2835194 2836975 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_3416 ABC transporter-related protein; ABC transporter ATP-binding and permease 2835194..2836975 Psychromonas ingrahamii 37 4627118 YP_943672.1 CDS Ping_2333 NC_008709.1 2837161 2837733 R hypothetical protein complement(2837161..2837733) Psychromonas ingrahamii 37 4627119 YP_943673.1 CDS Ping_2334 NC_008709.1 2838369 2839733 D TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: tcx:Tcr_0029 sodium/sulphate symporter; anion transporter 2838369..2839733 Psychromonas ingrahamii 37 4627120 YP_943674.1 CDS Ping_2335 NC_008709.1 2840129 2840389 R KEGG: son:SO2181 hypothetical protein; hypothetical protein complement(2840129..2840389) Psychromonas ingrahamii 37 4627121 YP_943675.1 CDS Ping_2336 NC_008709.1 2840668 2842617 R KEGG: dps:DP1006 related to NAD-dependent DNA ligase; PFAM: BRCT domain protein; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: NAD-dependent DNA ligase-like; DNA ligase (NAD(+)) complement(2840668..2842617) Psychromonas ingrahamii 37 4627122 YP_943676.1 CDS Ping_2338 NC_008709.1 2843035 2843910 R TIGRFAM: cell division protein ZipA; PFAM: ZipA, C-terminal FtsZ-binding region; KEGG: son:SO2897 cell division protein ZipA; cell division protein ZipA complement(2843035..2843910) Psychromonas ingrahamii 37 4627124 YP_943677.1 CDS Ping_2339 NC_008709.1 2844077 2844868 D PFAM: protein of unknown function DUF540; KEGG: eca:ECA0895 putative sulfate transporter; hypothetical protein 2844077..2844868 Psychromonas ingrahamii 37 4627125 YP_943678.1 CDS Ping_2340 NC_008709.1 2845083 2845559 R PFAM: response regulator receiver; KEGG: ppr:PBPRA1218 putative chemotaxis protein CheY; CheY-like chemotaxis protein, response regulator receiver complement(2845083..2845559) Psychromonas ingrahamii 37 4627126 YP_943679.1 CDS Ping_2341 NC_008709.1 2845598 2847016 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: ppr:PBPRA1216 putative transporter; anion transporter complement(2845598..2847016) Psychromonas ingrahamii 37 4627127 YP_943680.1 CDS Ping_2342 NC_008709.1 2847122 2847595 R PFAM: response regulator receiver; KEGG: ppr:PBPRA1218 putative chemotaxis protein CheY; CheY-like chemotaxis protein, response regulator receiver complement(2847122..2847595) Psychromonas ingrahamii 37 4623548 YP_943681.1 CDS Ping_2343 NC_008709.1 2847635 2849050 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: vfi:VF1052 transporter, divalent anion:sodium symporter family; anion transporter complement(2847635..2849050) Psychromonas ingrahamii 37 4623549 YP_943682.1 CDS pepN NC_008709.1 2849181 2851823 R TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: stm:STM1057 aminopeptidase N; aminopeptidase N complement(2849181..2851823) Psychromonas ingrahamii 37 4623550 YP_943683.1 CDS Ping_2345 NC_008709.1 2851929 2854622 R PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: son:SO2116 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(2851929..2854622) Psychromonas ingrahamii 37 4623551 YP_943684.1 CDS Ping_2346 NC_008709.1 2854807 2856189 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: vvy:VV1730 Na+-driven multidrug efflux pump; MATE efflux family protein 2854807..2856189 Psychromonas ingrahamii 37 4623552 YP_943685.1 CDS Ping_2347 NC_008709.1 2856321 2856791 R hypothetical protein complement(2856321..2856791) Psychromonas ingrahamii 37 4623553 YP_943686.1 CDS Ping_2348 NC_008709.1 2857470 2858951 R KEGG: ade:Adeh_0135 glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthases, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; glycogen/starch synthase complement(2857470..2858951) Psychromonas ingrahamii 37 4623554 YP_943687.1 CDS Ping_2349 NC_008709.1 2859344 2860105 R KEGG: hch:HCH_06804 hypothetical protein; hypothetical protein complement(2859344..2860105) Psychromonas ingrahamii 37 4623555 YP_943688.1 CDS Ping_2350 NC_008709.1 2860289 2861890 D KEGG: aae:aq_922 hypothetical protein; hypothetical protein 2860289..2861890 Psychromonas ingrahamii 37 4623556 YP_943689.1 CDS Ping_2351 NC_008709.1 2862229 2863473 D PFAM: protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: ppr:PBPRA2167 hypothetical protein; serine/threonine protein kinase 2862229..2863473 Psychromonas ingrahamii 37 4623557 YP_943690.1 CDS Ping_2352 NC_008709.1 2863591 2863842 D KEGG: vch:VCA0343 hypothetical protein; hypothetical protein 2863591..2863842 Psychromonas ingrahamii 37 4623558 YP_943691.1 CDS Ping_2353 NC_008709.1 2864283 2866979 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: dps:DP0307 probable cation-transporting ATPase; P-type HAD superfamily ATPase 2864283..2866979 Psychromonas ingrahamii 37 4623559 YP_943692.1 CDS Ping_2355 NC_008709.1 2867705 2867992 D KEGG: tcx:Tcr_1933 uncharacterized conserved coiled coil protein; hypothetical protein 2867705..2867992 Psychromonas ingrahamii 37 4623561 YP_943693.1 CDS Ping_2356 NC_008709.1 2868033 2868488 D KEGG: tcx:Tcr_1934 hypothetical protein; hypothetical protein 2868033..2868488 Psychromonas ingrahamii 37 4623562 YP_943694.1 CDS Ping_2358 NC_008709.1 2869339 2869665 R hypothetical protein complement(2869339..2869665) Psychromonas ingrahamii 37 4623564 YP_943695.1 CDS glk NC_008709.1 2870385 2871347 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(2870385..2871347) Psychromonas ingrahamii 37 4624606 YP_943696.1 CDS rpiR NC_008709.1 2871640 2872500 D Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2871640..2872500 Psychromonas ingrahamii 37 4624607 YP_943697.1 CDS Ping_2361 NC_008709.1 2872575 2874005 D PFAM: pyruvate kinase; KEGG: ppr:PBPRA2431 putative pyruvate kinase II; pyruvate kinase 2872575..2874005 Psychromonas ingrahamii 37 4623695 YP_943698.1 CDS Ping_2362 NC_008709.1 2874099 2874380 R PFAM: protein of unknown function DUF1315; KEGG: ilo:IL1270 hypothetical protein; hypothetical protein complement(2874099..2874380) Psychromonas ingrahamii 37 4623696 YP_943699.1 CDS Ping_2363 NC_008709.1 2874523 2876628 R KEGG: pat:Patl_1637 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX complement(2874523..2876628) Psychromonas ingrahamii 37 4623697 YP_943700.1 CDS Ping_2364 NC_008709.1 2876629 2878944 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(2876629..2878944) Psychromonas ingrahamii 37 4623698 YP_943701.1 CDS Ping_2365 NC_008709.1 2878980 2881178 R KEGG: pat:Patl_1635 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase complement(2878980..2881178) Psychromonas ingrahamii 37 4623699 YP_943702.1 CDS Ping_2366 NC_008709.1 2881488 2882393 D PFAM: Aldose 1-epimerase; KEGG: vfi:VF0912 aldose 1-epimerase-like protein; aldose 1-epimerase 2881488..2882393 Psychromonas ingrahamii 37 4623700 YP_943703.1 CDS Ping_2367 NC_008709.1 2883131 2884123 D TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: ppr:PBPRA2602 putative glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2883131..2884123 Psychromonas ingrahamii 37 4623701 YP_943704.1 CDS Ping_2368 NC_008709.1 2884465 2886447 R PFAM: transglutaminase domain protein; KEGG: psb:Psyr_2055 transglutaminase-like; transglutaminase domain-containing protein complement(2884465..2886447) Psychromonas ingrahamii 37 4623702 YP_943705.1 CDS Ping_2369 NC_008709.1 2886444 2887415 R PFAM: protein of unknown function DUF58; KEGG: sdn:Sden_2349 protein of unknown function DUF58; hypothetical protein complement(2886444..2887415) Psychromonas ingrahamii 37 4623703 YP_943706.1 CDS Ping_2370 NC_008709.1 2887419 2888336 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: sdn:Sden_2348 ATPase associated with various cellular activities, AAA_3; MoxR-like ATPase complement(2887419..2888336) Psychromonas ingrahamii 37 4623704 YP_943707.1 CDS Ping_2371 NC_008709.1 2888795 2889175 R KEGG: vch:VCA0432 hypothetical protein; hypothetical protein complement(2888795..2889175) Psychromonas ingrahamii 37 4623705 YP_943708.1 CDS thiE NC_008709.1 2889297 2889914 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(2889297..2889914) Psychromonas ingrahamii 37 4623706 YP_943709.1 CDS Ping_2373 NC_008709.1 2889957 2890760 R catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase complement(2889957..2890760) Psychromonas ingrahamii 37 4623707 YP_943710.1 CDS Ping_2374 NC_008709.1 2891153 2891833 R PFAM: TENA/THI-4 domain protein; KEGG: vpa:VPA0132 putative transcriptional activator; transcriptional activator complement(2891153..2891833) Psychromonas ingrahamii 37 4623708 YP_943711.1 CDS Ping_2375 NC_008709.1 2891850 2892788 R KEGG: vpa:VPA0133 putative ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(2891850..2892788) Psychromonas ingrahamii 37 4623709 YP_943712.1 CDS Ping_2376 NC_008709.1 2892838 2893635 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VPA0134 ABC transporter permease protein; ABC transporter substrate binding inner membrane protein complement(2892838..2893635) Psychromonas ingrahamii 37 4624029 YP_943713.1 CDS Ping_2377 NC_008709.1 2893628 2894416 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA0135 putative ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein complement(2893628..2894416) Psychromonas ingrahamii 37 4624030 YP_943714.1 CDS Ping_2378 NC_008709.1 2894400 2895251 R catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase complement(2894400..2895251) Psychromonas ingrahamii 37 4624031 YP_943715.1 CDS Ping_2379 NC_008709.1 2895981 2896376 D PFAM: regulatory protein, LysR; KEGG: vfi:VF2051 transcriptional regulators, LysR family; LysR family transcriptional regulator 2895981..2896376 Psychromonas ingrahamii 37 4624032 YP_943716.1 CDS Ping_2380 NC_008709.1 2896381 2896755 D KEGG: ppr:PBPRB0712 hypothetical transcriptional regulator; putative transcriptional regulator 2896381..2896755 Psychromonas ingrahamii 37 4624033 YP_943717.1 CDS Ping_2381 NC_008709.1 2897028 2898734 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: eba:ebA583 exo-alpha-1,4-glucosidase; alpha-D-1,4-glucosidase complement(2897028..2898734) Psychromonas ingrahamii 37 4624034 YP_943718.1 CDS glk NC_008709.1 2898894 2899859 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(2898894..2899859) Psychromonas ingrahamii 37 4624035 YP_943719.1 CDS Ping_2383 NC_008709.1 2899906 2901606 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: ppr:PBPRB0410 putative glycosidase; dextran glucosidase complement(2899906..2901606) Psychromonas ingrahamii 37 4624036 YP_943720.1 CDS Ping_2384 NC_008709.1 2902072 2902434 R KEGG: vvy:VV1848 hypothetical protein; hypothetical protein complement(2902072..2902434) Psychromonas ingrahamii 37 4624037 YP_943721.1 CDS Ping_2385 NC_008709.1 2902601 2902906 R hypothetical protein complement(2902601..2902906) Psychromonas ingrahamii 37 4624038 YP_943722.1 CDS Ping_2386 NC_008709.1 2903132 2904919 R KEGG: ana:all4929 unknown protein; signal transduction protein complement(2903132..2904919) Psychromonas ingrahamii 37 4624039 YP_943723.1 CDS Ping_2388 NC_008709.1 2906143 2906367 R PFAM: transposase IS3/IS911 family protein; KEGG: cps:CPS_2959 ISCps3, transposase orfA; transposase IS3/IS911 family protein complement(2906143..2906367) Psychromonas ingrahamii 37 4624041 YP_943724.1 CDS Ping_2389 NC_008709.1 2907353 2907610 R KEGG: vfi:VF0417 hypothetical protein; hypothetical protein complement(2907353..2907610) Psychromonas ingrahamii 37 4624042 YP_943725.1 CDS Ping_2390 NC_008709.1 2908057 2909388 D PFAM: GTP-binding protein, HSR1-related; KEGG: cps:CPS_2456 putative GTP-binding protein HflX; HSR1-like GTP-binding protein 2908057..2909388 Psychromonas ingrahamii 37 4624043 YP_943726.1 CDS Ping_2393 NC_008709.1 2910612 2911205 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: pat:Patl_2279 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(2910612..2911205) Psychromonas ingrahamii 37 4624046 YP_943727.1 CDS Ping_2394 NC_008709.1 2912351 2925853 D TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: dps:DP1520 hypothetical protein; filamentous hemagglutinin outer membrane protein 2912351..2925853 Psychromonas ingrahamii 37 4625468 YP_943728.1 CDS Ping_2395 NC_008709.1 2925850 2927559 D PFAM: Polypeptide-transport-associated domain protein, ShlB-type; KEGG: cvi:CV1468 probable activation/secretion signal peptide protein; polypeptide-transport-associated domain-containing protein 2925850..2927559 Psychromonas ingrahamii 37 4625469 YP_943729.1 CDS Ping_2396 NC_008709.1 2934625 2936370 D KEGG: vpa:VP3011 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2934625..2936370 Psychromonas ingrahamii 37 4625473 YP_943730.1 CDS Ping_2398 NC_008709.1 2937116 2937874 R PFAM: protein of unknown function DUF81; KEGG: mlo:mll3907 putative integral membrane protein; hypothetical protein complement(2937116..2937874) Psychromonas ingrahamii 37 4625475 YP_943731.1 CDS Ping_2399 NC_008709.1 2938263 2939771 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: ppr:PBPRB0478 putative aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(2938263..2939771) Psychromonas ingrahamii 37 4625476 YP_943732.1 CDS Ping_2401 NC_008709.1 2941097 2942323 R KEGG: chy:CHY_1355 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(2941097..2942323) Psychromonas ingrahamii 37 4625478 YP_943733.1 CDS Ping_2402 NC_008709.1 2942952 2943734 R KEGG: cps:CPS_3437 hypothetical protein; hypothetical protein complement(2942952..2943734) Psychromonas ingrahamii 37 4625479 YP_943734.1 CDS Ping_2403 NC_008709.1 2944357 2945355 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: ilo:IL0315 predicted NADP-dependent oxidoreductases; alcohol dehydrogenase complement(2944357..2945355) Psychromonas ingrahamii 37 4625480 YP_943735.1 CDS Ping_2404 NC_008709.1 2945664 2946536 D PFAM: metal-dependent protein hydrolase; KEGG: cps:CPS_2163 hypothetical protein; metal-dependent protein hydrolase 2945664..2946536 Psychromonas ingrahamii 37 4625481 YP_943736.1 CDS Ping_2405 NC_008709.1 2946772 2947491 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: hch:HCH_00754 phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU complement(2946772..2947491) Psychromonas ingrahamii 37 4625482 YP_943737.1 CDS Ping_2406 NC_008709.1 2947518 2948345 R KEGG: sde:Sde_3752 putative phosphate ABC transporter, ATP-binding protein (PstB); TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC phosphate transporter ATP-binding protein complement(2947518..2948345) Psychromonas ingrahamii 37 4625483 YP_943738.1 CDS Ping_2407 NC_008709.1 2948386 2949741 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP1882 probable phosphate ABC transporter, permease protein (PstA); ABC phosphate transporter inner membrane protein, PstA-like protein complement(2948386..2949741) Psychromonas ingrahamii 37 4625484 YP_943739.1 CDS Ping_2408 NC_008709.1 2949734 2951140 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1072 phosphate ABC transporter, permease protein; ABC phosphate transporter inner membrane protein, PstC-like protein complement(2949734..2951140) Psychromonas ingrahamii 37 4625485 YP_943740.1 CDS Ping_2409 NC_008709.1 2951224 2952276 R KEGG: dps:DP1881 related to phosphate ABC transporter, periplasmic binding protein; ABC phosphate transporter eriplasmic phosphate-binding protein complement(2951224..2952276) Psychromonas ingrahamii 37 4625486 YP_943741.1 CDS Ping_2410 NC_008709.1 2952717 2953112 D KEGG: ppr:PBPRB0316 hypothetical protein; hypothetical protein 2952717..2953112 Psychromonas ingrahamii 37 4625956 YP_943742.1 CDS Ping_2411 NC_008709.1 2953159 2955057 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: pfl:PFL_4395 EAL domain/GGDEF domain protein; diguanylate cyclase/phosphodiesterase complement(2953159..2955057) Psychromonas ingrahamii 37 4625957 YP_943743.1 CDS Ping_2412 NC_008709.1 2955356 2955553 D KEGG: pat:Patl_1752 hypothetical protein; hypothetical protein 2955356..2955553 Psychromonas ingrahamii 37 4625958 YP_943744.1 CDS Ping_2413 NC_008709.1 2956771 2958276 R PFAM: Ppx/GppA phosphatase; KEGG: vpa:VP0572 exopolyphosphatase; Ppx/GppA phosphatase complement(2956771..2958276) Psychromonas ingrahamii 37 4625959 YP_943745.1 CDS Ping_2414 NC_008709.1 2958260 2960428 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(2958260..2960428) Psychromonas ingrahamii 37 4625960 YP_943746.1 CDS Ping_2415 NC_008709.1 2960474 2960845 R hypothetical protein complement(2960474..2960845) Psychromonas ingrahamii 37 4625961 YP_943747.1 CDS Ping_2416 NC_008709.1 2961235 2962128 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: psb:Psyr_2268 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(2961235..2962128) Psychromonas ingrahamii 37 4625962 YP_943748.1 CDS Ping_2417 NC_008709.1 2962284 2964086 D PFAM: Amidase; KEGG: rpa:RPA1404 glutamyl-tRNA(Gln) amidotransferase subunit A; amidase 2962284..2964086 Psychromonas ingrahamii 37 4625963 YP_943749.1 CDS Ping_2418 NC_008709.1 2964125 2965759 D PFAM: extracellular solute-binding protein, family 5; KEGG: rpa:RPA1473 possible peptide transport system substrate-binding protein; ABC transporter extracellular solute-binding protein 2964125..2965759 Psychromonas ingrahamii 37 4625964 YP_943750.1 CDS Ping_2419 NC_008709.1 2965768 2966793 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4050 binding-protein-dependent transport systems inner membrane component; ABC transporter D-Ala-D-Ala-binding inner membrane protein 2965768..2966793 Psychromonas ingrahamii 37 4625965 YP_943751.1 CDS dppC NC_008709.1 2966786 2967652 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1471 putative dipeptide ABC transporter (permease); dipeptide ABC transport system inner membrane binding component DppC 2966786..2967652 Psychromonas ingrahamii 37 4625966 YP_943752.1 CDS Ping_2421 NC_008709.1 2967655 2969388 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: bja:blr3340 ABC transporter ATP-binding protein; oligopeptide ABC transporter ATP-binding protein 2967655..2969388 Psychromonas ingrahamii 37 4625967 YP_943753.1 CDS Ping_2422 NC_008709.1 2969608 2970459 R KEGG: msu:MS2305 hypothetical protein; hypothetical protein complement(2969608..2970459) Psychromonas ingrahamii 37 4625968 YP_943754.1 CDS Ping_2423 NC_008709.1 2970534 2971769 R KEGG: pat:Patl_2051 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase complement(2970534..2971769) Psychromonas ingrahamii 37 4625969 YP_943755.1 CDS Ping_2424 NC_008709.1 2971803 2973035 R PFAM: aminotransferase, class V; KEGG: pat:Patl_2052 aminotransferase, class V; serine--pyruvate transaminase complement(2971803..2973035) Psychromonas ingrahamii 37 4625970 YP_943756.1 CDS Ping_2425 NC_008709.1 2973032 2974603 R PFAM: gamma-glutamyltranspeptidase; KEGG: vch:VCA0558 gamma-glutamyltranspeptidase, putative; gamma-glutamyltransferase complement(2973032..2974603) Psychromonas ingrahamii 37 4625971 YP_943757.1 CDS Ping_2426 NC_008709.1 2974600 2975796 R PFAM: Amidase; KEGG: pat:Patl_2055 amidase; amidase complement(2974600..2975796) Psychromonas ingrahamii 37 4625972 YP_943758.1 CDS Ping_2427 NC_008709.1 2975809 2976816 R PFAM: Bile acid:sodium symporter; KEGG: transporter, putative; bile acid:sodium symporter complement(2975809..2976816) Psychromonas ingrahamii 37 4626393 YP_943759.1 CDS Ping_2428 NC_008709.1 2976889 2977707 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pat:Patl_2057 transcriptional regulator, RpiR family; DNA-binding helix-turn-helix domain-containing transcriptional regulator protein complement(2976889..2977707) Psychromonas ingrahamii 37 4626394 YP_943760.1 CDS Ping_2429 NC_008709.1 2977738 2978466 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB0869 putative amino acid ABC transporter, ATP-binding protein; histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein complement(2977738..2978466) Psychromonas ingrahamii 37 4626395 YP_943761.1 CDS Ping_2430 NC_008709.1 2978453 2979103 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3493 putative amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane protein complement(2978453..2979103) Psychromonas ingrahamii 37 4626396 YP_943762.1 CDS Ping_2431 NC_008709.1 2979115 2979783 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB0867 putative amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane protein complement(2979115..2979783) Psychromonas ingrahamii 37 4626397 YP_943763.1 CDS Ping_2432 NC_008709.1 2979810 2980601 R PFAM: extracellular solute-binding protein, family 3; KEGG: ypn:YPN_0839 amino acid ABC transporter, periplasmic protein; glutamine ABC transporter extracellular solute-binding family 3 protein complement(2979810..2980601) Psychromonas ingrahamii 37 4626398 YP_943764.1 CDS Ping_2433 NC_008709.1 2981395 2982279 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: sfr:Sfri_3644 protein of unknown function DUF6, transmembrane; hypothetical protein 2981395..2982279 Psychromonas ingrahamii 37 4626399 YP_943765.1 CDS Ping_2434 NC_008709.1 2983043 2983867 D TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; KEGG: jan:Jann_1394 HAD-superfamily subfamily IIA hydrolase, hypothetical 3; HAD family hydrolase 2983043..2983867 Psychromonas ingrahamii 37 4626400 YP_943766.1 CDS Ping_2436 NC_008709.1 2984434 2985894 D KEGG: cps:CPS_2014 exodeoxyribonuclease I; PFAM: Exonuclease, RNase T and DNA polymerase III; Exonuclease C-terminal domain protein; SMART: Exonuclease; exodeoxyribonuclease I 2984434..2985894 Psychromonas ingrahamii 37 4626402 YP_943767.1 CDS Ping_2437 NC_008709.1 2986019 2986294 D hypothetical protein 2986019..2986294 Psychromonas ingrahamii 37 4626403 YP_943768.1 CDS Ping_2438 NC_008709.1 2986470 2987441 D TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: sdn:Sden_2520 cysteine synthase A; cysteine synthase A 2986470..2987441 Psychromonas ingrahamii 37 4626404 YP_943769.1 CDS Ping_2439 NC_008709.1 2987976 2988233 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: plu:plu1394 phosphocarrier protein HPr (histidine-containing protein); phosphotransferase system, phosphocarrier protein HPr 2987976..2988233 Psychromonas ingrahamii 37 4626405 YP_943770.1 CDS Ping_2440 NC_008709.1 2988355 2990076 D Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 2988355..2990076 Psychromonas ingrahamii 37 4626406 YP_943771.1 CDS Ping_2441 NC_008709.1 2990162 2990671 D functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 2990162..2990671 Psychromonas ingrahamii 37 4626407 YP_943772.1 CDS Ping_2442 NC_008709.1 2990787 2991137 D PFAM: arsenate reductase and related; KEGG: vfi:VF1913 arsenate reductase; arsenate reductase 2990787..2991137 Psychromonas ingrahamii 37 4626408 YP_943773.1 CDS Ping_2443 NC_008709.1 2991148 2992281 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2991148..2992281 Psychromonas ingrahamii 37 4626409 YP_943774.1 CDS Ping_2444 NC_008709.1 2992278 2992949 D PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: ppr:PBPRA0843 putative D,D-carboxypeptidase-related protein; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins 2992278..2992949 Psychromonas ingrahamii 37 4626410 YP_943775.1 CDS Ping_2445 NC_008709.1 2992973 2993332 D PFAM: type IV pilus assembly PilZ; KEGG: son:SO1227 hypothetical protein; type IV pilus assembly PilZ 2992973..2993332 Psychromonas ingrahamii 37 4626411 YP_943776.1 CDS Ping_2446 NC_008709.1 2993470 2994579 R KEGG: vfi:VF0509 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; phosphoserine phosphatase SerB complement(2993470..2994579) Psychromonas ingrahamii 37 4627128 YP_943777.1 CDS Ping_2447 NC_008709.1 2994616 2995242 D KEGG: vpa:VP2432 putative smp protein; hypothetical protein 2994616..2995242 Psychromonas ingrahamii 37 4627129 YP_943778.1 CDS Ping_2448 NC_008709.1 2995397 2995978 R PFAM: manganese and iron superoxide dismutase; KEGG: pat:Patl_1395 superoxide dismutase; superoxide dismutase complement(2995397..2995978) Psychromonas ingrahamii 37 4627130 YP_943779.1 CDS Ping_2449 NC_008709.1 2996199 2996537 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: vpa:VP2117 putative glutaredoxin protein; glutaredoxin-like protein 2996199..2996537 Psychromonas ingrahamii 37 4627131 YP_943780.1 CDS Ping_2450 NC_008709.1 2996651 2997274 R Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T complement(2996651..2997274) Psychromonas ingrahamii 37 4627132 YP_943781.1 CDS Ping_2451 NC_008709.1 2997381 2997713 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: yps:YPTB1220 hypothetical protein; HNH endonuclease complement(2997381..2997713) Psychromonas ingrahamii 37 4627133 YP_943782.1 CDS Ping_2452 NC_008709.1 2998348 2998962 D PFAM: protein of unknown function DUF1043; KEGG: cje:Cj1433c hypothetical protein; undecaprenyl pyrophosphate phosphatase 2998348..2998962 Psychromonas ingrahamii 37 4627134 YP_943783.1 CDS rbgA NC_008709.1 2999222 3000160 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 2999222..3000160 Psychromonas ingrahamii 37 4627135 YP_943784.1 CDS Ping_2454 NC_008709.1 3000204 3000803 R KEGG: sde:Sde_0594 hypothetical protein; hypothetical protein complement(3000204..3000803) Psychromonas ingrahamii 37 4627136 YP_943785.1 CDS Ping_2455 NC_008709.1 3001514 3002905 D PFAM: phospholipase D/Transphosphatidylase; KEGG: tdn:Tmden_1156 phospholipase D/transphosphatidylase; phospholipase D 3001514..3002905 Psychromonas ingrahamii 37 4627137 YP_943786.1 CDS Ping_2456 NC_008709.1 3003112 3003951 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tdn:Tmden_1157 endonuclease/exonuclease/phosphatase; hypothetical protein 3003112..3003951 Psychromonas ingrahamii 37 4627138 YP_943787.1 CDS Ping_2457 NC_008709.1 3004049 3006718 R PFAM: peptidase M14, carboxypeptidase A; Fibronectin, type III domain protein; KEGG: ppr:PBPRB0708 hypothetical protein; peptidase M14, carboxypeptidase A complement(3004049..3006718) Psychromonas ingrahamii 37 4627139 YP_943788.1 CDS Ping_2458 NC_008709.1 3006733 3008187 R PFAM: RimK domain protein ATP-grasp; KEGG: ppr:PBPRB0709 hypothetical protein; RimK domain-containing protein ATP-grasp complement(3006733..3008187) Psychromonas ingrahamii 37 4627140 YP_943789.1 CDS Ping_2459 NC_008709.1 3008156 3009118 R PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: ppr:PBPRB0710 hypothetical protein; RimK domain-containing protein ATP-grasp complement(3008156..3009118) Psychromonas ingrahamii 37 4627141 YP_943790.1 CDS Ping_2460 NC_008709.1 3009591 3010682 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ppr:PBPRB0711 hypothetical carboxypeptidase G2; peptidase dimerisation domain-containing protein 3009591..3010682 Psychromonas ingrahamii 37 4627142 YP_943791.1 CDS Ping_2461 NC_008709.1 3010993 3012924 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(3010993..3012924) Psychromonas ingrahamii 37 4627143 YP_943792.1 CDS Ping_2462 NC_008709.1 3013105 3013635 D KEGG: dps:DP0123 hypothetical protein; hypothetical protein 3013105..3013635 Psychromonas ingrahamii 37 4627144 YP_943793.1 CDS Ping_2463 NC_008709.1 3014029 3015273 D PFAM: phage integrase family protein; KEGG: cps:CPS_2917 site-specific recombinase, phage integrase family; phage integrase family protein 3014029..3015273 Psychromonas ingrahamii 37 4627146 YP_943794.1 CDS Ping_2464 NC_008709.1 3015302 3015952 R KEGG: vvy:VV0817 phage integrase; phage integrase complement(3015302..3015952) Psychromonas ingrahamii 37 4624416 YP_943795.1 CDS Ping_2465 NC_008709.1 3016667 3017563 D KEGG: vvy:VV2215 hypothetical protein; hypothetical protein 3016667..3017563 Psychromonas ingrahamii 37 4624417 YP_943796.1 CDS Ping_2466 NC_008709.1 3017845 3018372 R hypothetical protein complement(3017845..3018372) Psychromonas ingrahamii 37 4624418 YP_943797.1 CDS Ping_2467 NC_008709.1 3018427 3018816 R hypothetical protein complement(3018427..3018816) Psychromonas ingrahamii 37 4624419 YP_943798.1 CDS Ping_2468 NC_008709.1 3018883 3019842 D KEGG: ppr:PBPRA0980 hypothetical transposase; putative transposase 3018883..3019842 Psychromonas ingrahamii 37 4624420 YP_943799.1 CDS Ping_2469 NC_008709.1 3019795 3020787 R hypothetical protein complement(3019795..3020787) Psychromonas ingrahamii 37 4624421 YP_943800.1 CDS Ping_2470 NC_008709.1 3020797 3021468 R KEGG: hch:HCH_06523 GDSL-lilke lipase/acylhydrolase family protein; GDSL-lilke lipase/acylhydrolase family protein complement(3020797..3021468) Psychromonas ingrahamii 37 4624422 YP_943801.1 CDS Ping_2472 NC_008709.1 3021959 3022711 R hypothetical protein complement(3021959..3022711) Psychromonas ingrahamii 37 4624424 YP_943802.1 CDS Ping_2474 NC_008709.1 3023030 3023323 R hypothetical protein complement(3023030..3023323) Psychromonas ingrahamii 37 4624426 YP_943803.1 CDS Ping_2475 NC_008709.1 3024107 3024787 R hypothetical protein complement(3024107..3024787) Psychromonas ingrahamii 37 4624427 YP_943804.1 CDS Ping_2476 NC_008709.1 3025102 3025611 R hypothetical protein complement(3025102..3025611) Psychromonas ingrahamii 37 4624428 YP_943805.1 CDS Ping_2477 NC_008709.1 3025845 3029261 R PFAM: metallophosphoesterase; ADP-ribosylation/Crystallin J1; KEGG: hch:HCH_07000 ADP-ribosylglycohydrolase; ADP-ribosylation/crystallin J1 complement(3025845..3029261) Psychromonas ingrahamii 37 4624429 YP_943806.1 CDS Ping_2478 NC_008709.1 3029483 3030340 D KEGG: pha:PSHAa2990 hypothetical protein; hypothetical protein 3029483..3030340 Psychromonas ingrahamii 37 4624430 YP_943807.1 CDS Ping_2479 NC_008709.1 3030602 3031705 R KEGG: ypk:y3088 hypothetical protein; hypothetical protein complement(3030602..3031705) Psychromonas ingrahamii 37 4624431 YP_943808.1 CDS Ping_2480 NC_008709.1 3031698 3032609 R KEGG: rfr:Rfer_1360 hypothetical protein; hypothetical protein complement(3031698..3032609) Psychromonas ingrahamii 37 4624432 YP_943809.1 CDS Ping_2481 NC_008709.1 3032821 3033588 R KEGG: sgl:SG0738 hypothetical protein; hypothetical protein complement(3032821..3033588) Psychromonas ingrahamii 37 4624433 YP_943810.1 CDS Ping_2482 NC_008709.1 3033585 3033848 R PFAM: Prophage CP4-57 regulatory; KEGG: sde:Sde_2745 putative transcriptional regulator; phage transcriptional regulator AlpA complement(3033585..3033848) Psychromonas ingrahamii 37 4624434 YP_943811.1 CDS Ping_2483 NC_008709.1 3034290 3035021 R 6-carboxyhexanoate--CoA ligase complement(3034290..3035021) Psychromonas ingrahamii 37 4623516 YP_943812.1 CDS Ping_2484 NC_008709.1 3035538 3036299 R KEGG: ecs:ECs1219 putative small subunit terminase; hypothetical protein complement(3035538..3036299) Psychromonas ingrahamii 37 4623517 YP_943813.1 CDS Ping_2486 NC_008709.1 3038101 3041133 R PFAM: type III restriction enzyme, res subunit; KEGG: bbr:BB0913 type III restriction enzyme; type III restriction enzyme, res subunit complement(3038101..3041133) Psychromonas ingrahamii 37 4623519 YP_943814.1 CDS Ping_2487 NC_008709.1 3041144 3043120 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sat:SYN_01825 type III restriction-modification system methylation subunit; DNA methylase N-4/N-6 domain-containing protein complement(3041144..3043120) Psychromonas ingrahamii 37 4623520 YP_943815.1 CDS Ping_2489 NC_008709.1 3045362 3046180 R KEGG: ecc:c5377 hypothetical protein; hypothetical protein complement(3045362..3046180) Psychromonas ingrahamii 37 4623522 YP_943816.1 CDS Ping_2490 NC_008709.1 3046173 3049436 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: sat:SYN_01827 SNF2-related:helicase, C-terminal:type III restriction enzyme; helicase DEAD/DEAH box complement(3046173..3049436) Psychromonas ingrahamii 37 4623523 YP_943817.1 CDS Ping_2491 NC_008709.1 3049464 3049712 R KEGG: ecs:ECs2908 hypothetical protein; hypothetical protein complement(3049464..3049712) Psychromonas ingrahamii 37 4623524 YP_943818.1 CDS Ping_2493 NC_008709.1 3050162 3051796 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: vfi:VF0205 60 kDa chaperonin GROEL; chaperonin Cpn60, GroEL, large subunit of GroESL complement(3050162..3051796) Psychromonas ingrahamii 37 4623526 YP_943819.1 CDS Ping_2494 NC_008709.1 3051865 3052155 R PFAM: chaperonin Cpn10; KEGG: cps:CPS_0956 chaperone protein GroES; chaperonin Cpn10, GroES, small subunit of GroESL complement(3051865..3052155) Psychromonas ingrahamii 37 4623527 YP_943820.1 CDS Ping_2495 NC_008709.1 3052619 3052717 D hypothetical protein 3052619..3052717 Psychromonas ingrahamii 37 4623528 YP_943821.1 CDS Ping_2496 NC_008709.1 3053581 3054807 D PFAM: phage integrase family protein; KEGG: vvy:VV0817 phage integrase; phage integrase family protein 3053581..3054807 Psychromonas ingrahamii 37 4623529 YP_943822.1 CDS Ping_2498 NC_008709.1 3055967 3056218 D KEGG: hch:HCH_06093 hypothetical protein; hypothetical protein 3055967..3056218 Psychromonas ingrahamii 37 4626587 YP_943823.1 CDS Ping_2499 NC_008709.1 3056342 3057103 D PFAM: heat shock protein DnaJ domain protein; KEGG: hch:HCH_06092 DnaJ-class molecular chaperone; heat shock protein DnaJ domain-containing protein 3056342..3057103 Psychromonas ingrahamii 37 4626588 YP_943824.1 CDS Ping_2500 NC_008709.1 3057891 3058592 D KEGG: pat:Patl_1217 hypothetical protein; hypothetical protein 3057891..3058592 Psychromonas ingrahamii 37 4626589 YP_943825.1 CDS Ping_2504 NC_008709.1 3060844 3061428 R PFAM: CheB methylesterase; KEGG: rfr:Rfer_2357 CheB methylesterase; CheB methylesterase complement(3060844..3061428) Psychromonas ingrahamii 37 4626593 YP_943826.1 CDS galM NC_008709.1 3062209 3063276 R catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase complement(3062209..3063276) Psychromonas ingrahamii 37 4626595 YP_943827.1 CDS Ping_2507 NC_008709.1 3063471 3064487 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vpa:VP2396 LacI-family regulatory protein; LacI family transcriptional regulator complement(3063471..3064487) Psychromonas ingrahamii 37 4626596 YP_943828.1 CDS Ping_2508 NC_008709.1 3064716 3065780 D KEGG: vpa:VP2395 hypothetical protein; hypothetical protein 3064716..3065780 Psychromonas ingrahamii 37 4626597 YP_943829.1 CDS Ping_2509 NC_008709.1 3065868 3066896 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sal:Sala_0750 binding-protein-dependent transport systems inner membrane component; sugar ABC transporter inner membrane binding protein 3065868..3066896 Psychromonas ingrahamii 37 4626598 YP_943830.1 CDS Ping_2510 NC_008709.1 3066896 3067732 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sal:Sala_0749 binding-protein-dependent transport systems inner membrane component; sugar ABC transporter inner membrane binding protein 3066896..3067732 Psychromonas ingrahamii 37 4626599 YP_943831.1 CDS Ping_2511 NC_008709.1 3067794 3069071 D PFAM: extracellular solute-binding protein, family 1; KEGG: sal:Sala_0748 extracellular solute-binding protein, family 1; sugar ABC transporter extracellular solute-binding family 1 protein 3067794..3069071 Psychromonas ingrahamii 37 4626600 YP_943832.1 CDS Ping_2512 NC_008709.1 3069128 3070210 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA0851 putative sugar ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 3069128..3070210 Psychromonas ingrahamii 37 4626601 YP_943833.1 CDS Ping_2513 NC_008709.1 3070987 3072144 D PFAM: iron-containing alcohol dehydrogenase; KEGG: sfx:S3258 putative oxidoreductase; alcohol dehydrogenase 3070987..3072144 Psychromonas ingrahamii 37 4626602 YP_943834.1 CDS Ping_2514 NC_008709.1 3072932 3074521 R SMART: von Willebrand factor, type A; KEGG: ppr:PBPRB0630 hypothetical protein; von Willebrand factor type A domain-containing protein complement(3072932..3074521) Psychromonas ingrahamii 37 4626603 YP_943835.1 CDS Ping_2515 NC_008709.1 3074514 3076106 R PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: ppr:PBPRB0631 hypothetical protein; ATPase associated with various cellular activities complement(3074514..3076106) Psychromonas ingrahamii 37 4626604 YP_943836.1 CDS Ping_2516 NC_008709.1 3076205 3076627 D KEGG: ppr:PBPRB0632 hypothetical protein; hypothetical protein 3076205..3076627 Psychromonas ingrahamii 37 4623412 YP_943837.1 CDS Ping_2517 NC_008709.1 3076655 3076798 R hypothetical protein complement(3076655..3076798) Psychromonas ingrahamii 37 4623413 YP_943838.1 CDS Ping_2518 NC_008709.1 3076905 3077477 D KEGG: ppr:PBPRB0633 hypothetical protein; hypothetical protein 3076905..3077477 Psychromonas ingrahamii 37 4623414 YP_943839.1 CDS Ping_2519 NC_008709.1 3077489 3079693 R KEGG: cps:CPS_2918 hypothetical protein; hypothetical protein complement(3077489..3079693) Psychromonas ingrahamii 37 4623415 YP_943840.1 CDS Ping_2520 NC_008709.1 3079915 3080397 D hypothetical protein 3079915..3080397 Psychromonas ingrahamii 37 4623416 YP_943841.1 CDS Ping_2521 NC_008709.1 3080401 3080880 R hypothetical protein complement(3080401..3080880) Psychromonas ingrahamii 37 4623417 YP_943842.1 CDS Ping_2522 NC_008709.1 3080984 3081793 R PFAM: NERD domain protein; DNA topoisomerase, type IA, zn finger domain protein; KEGG: sat:SYN_02043 hypothetical membrane protein; DNA-binding NERD domain-containing protein complement(3080984..3081793) Psychromonas ingrahamii 37 4623418 YP_943843.1 CDS Ping_2523 NC_008709.1 3081848 3084751 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: vch:VC0812 helicase-related protein; type III restriction enzyme, res subunit complement(3081848..3084751) Psychromonas ingrahamii 37 4623419 YP_943844.1 CDS Ping_2524 NC_008709.1 3084758 3085345 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO1409 hypothetical protein; type 12 methyltransferase complement(3084758..3085345) Psychromonas ingrahamii 37 4623420 YP_943845.1 CDS Ping_2525 NC_008709.1 3085528 3085974 R hypothetical protein complement(3085528..3085974) Psychromonas ingrahamii 37 4623421 YP_943846.1 CDS Ping_2526 NC_008709.1 3086252 3086587 R hypothetical protein complement(3086252..3086587) Psychromonas ingrahamii 37 4623422 YP_943847.1 CDS Ping_2527 NC_008709.1 3086973 3087743 D KEGG: sdn:Sden_2317 hypothetical protein; hypothetical protein 3086973..3087743 Psychromonas ingrahamii 37 4623423 YP_943848.1 CDS Ping_2528 NC_008709.1 3088581 3089654 D PFAM: filamentation induced by cAMP protein Fic; KEGG: sdn:Sden_0294 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3088581..3089654 Psychromonas ingrahamii 37 4623424 YP_943849.1 CDS Ping_2529 NC_008709.1 3090224 3093256 D PFAM: glycoside hydrolase, family 31; glycoside hydrolase, starch-binding; KEGG: ppr:PBPRB0321 hypothetical protein; glycoside hydrolase 3090224..3093256 Psychromonas ingrahamii 37 4623425 YP_943850.1 CDS Ping_2530 NC_008709.1 3093656 3094195 R PFAM: protein of unknown function DUF1568; KEGG: ana:alr4734 hypothetical protein; hypothetical protein complement(3093656..3094195) Psychromonas ingrahamii 37 4623426 YP_943851.1 CDS Ping_2531 NC_008709.1 3094644 3094913 D KEGG: cps:CPS_0522 hypothetical protein; hypothetical protein 3094644..3094913 Psychromonas ingrahamii 37 4623427 YP_943852.1 CDS Ping_2532 NC_008709.1 3095301 3095570 D KEGG: cps:CPS_0522 hypothetical protein; hypothetical protein 3095301..3095570 Psychromonas ingrahamii 37 4623428 YP_943853.1 CDS Ping_2533 NC_008709.1 3095658 3096125 D KEGG: mag:amb3628 hypothetical protein; hypothetical protein 3095658..3096125 Psychromonas ingrahamii 37 4623429 YP_943854.1 CDS Ping_2534 NC_008709.1 3096407 3097171 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3096407..3097171 Psychromonas ingrahamii 37 4623430 YP_943855.1 CDS Ping_2535 NC_008709.1 3097281 3098303 D PFAM: ferrochelatase; KEGG: pha:PSHAb0112 ferrochelatase; ferrochelatase 3097281..3098303 Psychromonas ingrahamii 37 4623743 YP_943856.1 CDS Ping_2536 NC_008709.1 3098503 3099153 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: cps:CPS_1932 DNA-binding response regulator; two component LuxR family transcriptional reguator protein 3098503..3099153 Psychromonas ingrahamii 37 4623744 YP_943857.1 CDS Ping_2537 NC_008709.1 3099250 3101778 R KEGG: cps:CPS_1882 sensory box sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; bifunctional sensor protein/response regulator complement(3099250..3101778) Psychromonas ingrahamii 37 4623745 YP_943858.1 CDS Ping_2538 NC_008709.1 3101771 3102919 R PFAM: domain of unknown function DUF1745; KEGG: cps:CPS_1883 hypothetical protein; hypothetical protein complement(3101771..3102919) Psychromonas ingrahamii 37 4623746 YP_943859.1 CDS Ping_2539 NC_008709.1 3103173 3104693 R PFAM: aldehyde dehydrogenase; KEGG: cps:CPS_1885 aldehyde dehydrogenase family protein; aldehyde dehydrogenase complement(3103173..3104693) Psychromonas ingrahamii 37 4623747 YP_943860.1 CDS Ping_2540 NC_008709.1 3105283 3106227 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(3105283..3106227) Psychromonas ingrahamii 37 4623748 YP_943861.1 CDS Ping_2541 NC_008709.1 3106444 3107223 R TIGRFAM: acetoin reductases; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: ilo:IL0792 acetoin(diacetyl) reductase; acetoin reductase complement(3106444..3107223) Psychromonas ingrahamii 37 4623749 YP_943862.1 CDS Ping_2542 NC_008709.1 3107284 3109095 R KEGG: rde:RD1_3706 monooxygenase protein, putative; monooxygenase protein complement(3107284..3109095) Psychromonas ingrahamii 37 4623750 YP_943863.1 CDS Ping_2543 NC_008709.1 3109657 3109866 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3558 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(3109657..3109866) Psychromonas ingrahamii 37 4623751 YP_943864.1 CDS Ping_2544 NC_008709.1 3110191 3110793 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tdn:Tmden_1449 methyltransferase, putative; type 12 methyltransferase complement(3110191..3110793) Psychromonas ingrahamii 37 4624118 YP_943865.1 CDS Ping_2545 NC_008709.1 3111428 3113227 D PFAM: peptidase M24; KEGG: son:SO1388 aminopeptidase P, putative; peptidase M24 3111428..3113227 Psychromonas ingrahamii 37 4624119 YP_943866.1 CDS Ping_2546 NC_008709.1 3113727 3114581 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: vfi:VFA0029 transcriptional regulator, AraC family; DNA-binding helix-turn-helix domain-containing transcriptional regulator protein complement(3113727..3114581) Psychromonas ingrahamii 37 4624120 YP_943867.1 CDS Ping_2547 NC_008709.1 3115241 3116449 D PFAM: major facilitator superfamily MFS_1; KEGG: vvu:VV21453 permease of the major facilitator superfamily; major facilitator superfamily transporter 3115241..3116449 Psychromonas ingrahamii 37 4624121 YP_943868.1 CDS Ping_2548 NC_008709.1 3116558 3116842 R hypothetical protein complement(3116558..3116842) Psychromonas ingrahamii 37 4624122 YP_943869.1 CDS Ping_2549 NC_008709.1 3117354 3120374 D KEGG: rfr:Rfer_2355 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; PAS fold domain protein; SMART: PAS domain containing protein; bifunctional CheR-type MCP methyltransferase/PAS sensor protein 3117354..3120374 Psychromonas ingrahamii 37 4624196 YP_943870.1 CDS Ping_2550 NC_008709.1 3120371 3121609 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tbd:Tbd_1042 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s); PAS/PAC sensor-containing diguanylate cyclase 3120371..3121609 Psychromonas ingrahamii 37 4624197 YP_943871.1 CDS Ping_2551 NC_008709.1 3123126 3123512 D KEGG: pol:Bpro_5346 hypothetical protein; hypothetical protein 3123126..3123512 Psychromonas ingrahamii 37 4624201 YP_943872.1 CDS Ping_2552 NC_008709.1 3123680 3124648 D KEGG: dre:562943 similar to Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain containing protein 2); methyl-accepting chemotaxis protein 3123680..3124648 Psychromonas ingrahamii 37 4624202 YP_943873.1 CDS Ping_2553 NC_008709.1 3124878 3125141 R SMART: helix-turn-helix domain protein; KEGG: ppr:PBPRA1807 putative transcriptional regulator; DNA-binding transcriptional regulator complement(3124878..3125141) Psychromonas ingrahamii 37 4624203 YP_943874.1 CDS Ping_2554 NC_008709.1 3125298 3125867 D KEGG: ppr:PBPRA1806 hypothetical protein; hypothetical protein 3125298..3125867 Psychromonas ingrahamii 37 4624204 YP_943875.1 CDS Ping_2555 NC_008709.1 3125861 3127258 D KEGG: vvy:VV0144 hypothetical protein; hypothetical protein 3125861..3127258 Psychromonas ingrahamii 37 4624205 YP_943876.1 CDS Ping_2556 NC_008709.1 3127559 3127813 R hypothetical protein complement(3127559..3127813) Psychromonas ingrahamii 37 4624206 YP_943877.1 CDS Ping_2557 NC_008709.1 3128707 3129219 D hypothetical protein 3128707..3129219 Psychromonas ingrahamii 37 4624207 YP_943878.1 CDS Ping_2558 NC_008709.1 3129301 3130242 R hypothetical protein complement(3129301..3130242) Psychromonas ingrahamii 37 4624208 YP_943879.1 CDS Ping_2559 NC_008709.1 3131084 3131461 D KEGG: ppr:PBPRA0878 hypothetical protein; hypothetical protein 3131084..3131461 Psychromonas ingrahamii 37 4624209 YP_943880.1 CDS Ping_2560 NC_008709.1 3132569 3133792 R KEGG: rso:RSc3188 putative hemagglutinin-related protein; hypothetical protein complement(3132569..3133792) Psychromonas ingrahamii 37 4624210 YP_943881.1 CDS Ping_2561 NC_008709.1 3135332 3136396 R KEGG: nmu:Nmul_B2806 hypothetical protein; hypothetical protein complement(3135332..3136396) Psychromonas ingrahamii 37 4624211 YP_943882.1 CDS Ping_2562 NC_008709.1 3136589 3138214 D KEGG: rsp:RSP_3757 hypothetical protein; hypothetical protein 3136589..3138214 Psychromonas ingrahamii 37 4624212 YP_943883.1 CDS Ping_2563 NC_008709.1 3138207 3139364 D KEGG: bfr:BF1151 hypothetical protein; hypothetical protein 3138207..3139364 Psychromonas ingrahamii 37 4624213 YP_943884.1 CDS Ping_2564 NC_008709.1 3140568 3143891 D SMART: PKD domain containing protein; KEGG: son:SOA0110 lipoprotein, putative; PKD domain-containing protein 3140568..3143891 Psychromonas ingrahamii 37 4624214 YP_943885.1 CDS Ping_2565 NC_008709.1 3144667 3145446 D hypothetical protein 3144667..3145446 Psychromonas ingrahamii 37 4624215 YP_943886.1 CDS Ping_2566 NC_008709.1 3145655 3146632 D hypothetical protein 3145655..3146632 Psychromonas ingrahamii 37 4624216 YP_943887.1 CDS Ping_2567 NC_008709.1 3147034 3147480 R PFAM: nuclease (SNase domain protein); KEGG: hch:HCH_01990 micrococcal nuclease-like protein; nuclease complement(3147034..3147480) Psychromonas ingrahamii 37 4624217 YP_943888.1 CDS Ping_2568 NC_008709.1 3147625 3148353 R KEGG: cps:CPS_1634 hypothetical protein; hypothetical protein complement(3147625..3148353) Psychromonas ingrahamii 37 4624218 YP_943889.1 CDS Ping_2569 NC_008709.1 3148646 3149242 D PFAM: phage integrase family protein; KEGG: cps:CPS_2062 site-specific recombinase, phage integrase family; phage integrase family protein 3148646..3149242 Psychromonas ingrahamii 37 4624219 YP_943890.1 CDS Ping_2570 NC_008709.1 3150177 3151901 D KEGG: pfl:PFL_3832 hypothetical protein; hypothetical protein 3150177..3151901 Psychromonas ingrahamii 37 4624220 YP_943891.1 CDS Ping_2571 NC_008709.1 3153025 3154227 D hypothetical protein 3153025..3154227 Psychromonas ingrahamii 37 4624221 YP_943892.1 CDS Ping_2572 NC_008709.1 3154603 3155799 R KEGG: bat:BAS0872 tellurium resistance protein, putative; hypothetical protein complement(3154603..3155799) Psychromonas ingrahamii 37 4624222 YP_943893.1 CDS Ping_2573 NC_008709.1 3156419 3157579 R KEGG: ecs:ECs1344 hypothetical protein; hypothetical protein complement(3156419..3157579) Psychromonas ingrahamii 37 4624223 YP_943894.1 CDS Ping_2574 NC_008709.1 3157621 3157866 R KEGG: aci:ACIAD1952 tellurium resistance protein; stress protein, tellurium resistance protein complement(3157621..3157866) Psychromonas ingrahamii 37 4624224 YP_943895.1 CDS Ping_2575 NC_008709.1 3157953 3158528 R PFAM: stress protein; KEGG: eba:p1B315 protein involved in tellurite resistance; stress protein, tellurium resistance protein complement(3157953..3158528) Psychromonas ingrahamii 37 4624225 YP_943896.1 CDS Ping_2576 NC_008709.1 3158804 3159244 R PFAM: membrane-flanked domain; KEGG: plt:Plut_0824 hypothetical protein; membrane-flanked domain-containing protein complement(3158804..3159244) Psychromonas ingrahamii 37 4624226 YP_943897.1 CDS Ping_2577 NC_008709.1 3159666 3159929 R hypothetical protein complement(3159666..3159929) Psychromonas ingrahamii 37 4624227 YP_943898.1 CDS Ping_2578 NC_008709.1 3160252 3160503 R hypothetical protein complement(3160252..3160503) Psychromonas ingrahamii 37 4624228 YP_943899.1 CDS Ping_2579 NC_008709.1 3160698 3161666 R PFAM: Radical SAM domain protein; KEGG: vvu:VV20908 molybdenum cofactor biosynthesis enzyme; radical SAM protein complement(3160698..3161666) Psychromonas ingrahamii 37 4624229 YP_943900.1 CDS Ping_2580 NC_008709.1 3162051 3162821 D PFAM: Endonuclease I; KEGG: ppr:PBPRC0029 putative endonuclease I; deoxyribonuclease I 3162051..3162821 Psychromonas ingrahamii 37 4624230 YP_943901.1 CDS Ping_2581 NC_008709.1 3164136 3164549 D hypothetical protein 3164136..3164549 Psychromonas ingrahamii 37 4624231 YP_943902.1 CDS Ping_2583 NC_008709.1 3165214 3165816 R hypothetical protein complement(3165214..3165816) Psychromonas ingrahamii 37 4624272 YP_943903.1 CDS Ping_2584 NC_008709.1 3165828 3169127 R KEGG: hypothetical protein; hypothetical protein complement(3165828..3169127) Psychromonas ingrahamii 37 4624273 YP_943904.1 CDS Ping_2585 NC_008709.1 3169117 3170529 R PFAM: phage integrase family protein; KEGG: rme:Rmet_2172 phage integrase; phage integrase family protein complement(3169117..3170529) Psychromonas ingrahamii 37 4624274 YP_943905.1 CDS Ping_2586 NC_008709.1 3172265 3173662 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: ppr:PBPRB1407 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 3172265..3173662 Psychromonas ingrahamii 37 4624277 YP_943906.1 CDS Ping_2587 NC_008709.1 3174928 3175740 D TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO4292 phosphate ABC transporter, periplasmic phosphate-binding protein; ABC phosphate transporter periplasmic phosphate-binding protein 3174928..3175740 Psychromonas ingrahamii 37 4624279 YP_943907.1 CDS Ping_2588 NC_008709.1 3175829 3176695 D TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO4292 phosphate ABC transporter, periplasmic phosphate-binding protein; ABC phosphate transporter periplasmic phosphate-binding protein 3175829..3176695 Psychromonas ingrahamii 37 4624280 YP_943908.1 CDS pstC NC_008709.1 3176771 3177676 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4291 phosphate ABC transporter, permease protein; ABC phosphate transporter inner membrane protein PstC 3176771..3177676 Psychromonas ingrahamii 37 4624281 YP_943909.1 CDS pstA NC_008709.1 3177676 3178521 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4290 phosphate ABC transporter, permease protein; ABC phosphate transporter inner membrane protein PstA 3177676..3178521 Psychromonas ingrahamii 37 4624282 YP_943910.1 CDS Ping_2591 NC_008709.1 3178534 3179283 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 3178534..3179283 Psychromonas ingrahamii 37 4624283 YP_943911.1 CDS Ping_2592 NC_008709.1 3179507 3181618 R PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: cps:CPS_0605 hypothetical protein; hypothetical protein complement(3179507..3181618) Psychromonas ingrahamii 37 4624284 YP_943912.1 CDS Ping_2593 NC_008709.1 3181637 3182797 R KEGG: cps:CPS_0604 hypothetical protein; hypothetical protein complement(3181637..3182797) Psychromonas ingrahamii 37 4624285 YP_943913.1 CDS Ping_2594 NC_008709.1 3183555 3184487 D TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: pat:Patl_0934 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor, TAXI family protein 3183555..3184487 Psychromonas ingrahamii 37 4624286 YP_943914.1 CDS Ping_2595 NC_008709.1 3184510 3186414 D TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pat:Patl_0933 TRAP transporter, 4TM/12TM fusion protein; TRAP transporter, 4TM/12TM fusion protein 3184510..3186414 Psychromonas ingrahamii 37 4624287 YP_943915.1 CDS Ping_2596 NC_008709.1 3186510 3187598 R KEGG: pca:Pcar_2588 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase, class IV; branched-chain amino acid aminotransferase complement(3186510..3187598) Psychromonas ingrahamii 37 4624288 YP_943916.1 CDS Ping_2597 NC_008709.1 3187857 3188468 D PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: tpa:TP0988 hypothetical protein; multiple antibiotic resistance (MarC)-like protein 3187857..3188468 Psychromonas ingrahamii 37 4624289 YP_943917.1 CDS Ping_2599 NC_008709.1 3188899 3189906 D PFAM: Integrase, catalytic region; KEGG: plu:plu3016 transposase, IS30 family; integrase catalytic subunit 3188899..3189906 Psychromonas ingrahamii 37 4624307 YP_943918.1 CDS Ping_2600 NC_008709.1 3189981 3191756 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cps:CPS_0506 putative sucrose phosphorylase; sucrose phosphorylase complement(3189981..3191756) Psychromonas ingrahamii 37 4624308 YP_943919.1 CDS Ping_2601 NC_008709.1 3191773 3192999 R KEGG: cps:CPS_0507 hypothetical protein; hypothetical protein complement(3191773..3192999) Psychromonas ingrahamii 37 4624309 YP_943920.1 CDS Ping_2602 NC_008709.1 3193022 3193837 R catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; mannosyl-3-phosphoglycerate phosphatase complement(3193022..3193837) Psychromonas ingrahamii 37 4624310 YP_943921.1 CDS Ping_2603 NC_008709.1 3194318 3196219 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mbo:Mb0897 probable acyl-CoA dehydrogenase FadE10; acyl-CoA dehydrogenase domain-containing protein complement(3194318..3196219) Psychromonas ingrahamii 37 4624311 YP_943922.1 CDS Ping_2604 NC_008709.1 3196266 3198440 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bba:Bd1836 fatty oxidation complex, alpha subunit; 3-hydroxyacyl-CoA dehydrogenase complement(3196266..3198440) Psychromonas ingrahamii 37 4624312 YP_943923.1 CDS Ping_2605 NC_008709.1 3198440 3199753 R KEGG: bba:Bd1835 acetyl-CoA acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(3198440..3199753) Psychromonas ingrahamii 37 4624313 YP_943924.1 CDS Ping_2606 NC_008709.1 3199788 3201566 R PFAM: AMP-dependent synthetase and ligase; KEGG: plt:Plut_0972 long-chain fatty-acid-CoA ligase; AMP-dependent synthetase and ligase complement(3199788..3201566) Psychromonas ingrahamii 37 4624314 YP_943925.1 CDS Ping_2607 NC_008709.1 3201973 3202734 D PFAM: nitroreductase; KEGG: csa:Csal_0202 nitroreductase; nitroreductase 3201973..3202734 Psychromonas ingrahamii 37 4624315 YP_943926.1 CDS Ping_2608 NC_008709.1 3202949 3203614 D PFAM: phospholipase/Carboxylesterase; KEGG: hch:HCH_01605 predicted esterase; carboxylesterase 3202949..3203614 Psychromonas ingrahamii 37 4624316 YP_943927.1 CDS Ping_2609 NC_008709.1 3203649 3203903 D KEGG: son:SO1372 hypothetical protein; hypothetical protein 3203649..3203903 Psychromonas ingrahamii 37 4624317 YP_943928.1 CDS rpmJ NC_008709.1 3204280 3204393 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 3204280..3204393 Psychromonas ingrahamii 37 4624318 YP_943929.1 CDS rpsM NC_008709.1 3204517 3204873 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 3204517..3204873 Psychromonas ingrahamii 37 4624319 YP_943930.1 CDS Ping_2612 NC_008709.1 3204885 3205274 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 3204885..3205274 Psychromonas ingrahamii 37 4624320 YP_943931.1 CDS rpsD NC_008709.1 3205308 3205928 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 3205308..3205928 Psychromonas ingrahamii 37 4624321 YP_943932.1 CDS Ping_2614 NC_008709.1 3205954 3206940 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3205954..3206940 Psychromonas ingrahamii 37 4624322 YP_943933.1 CDS Ping_2615 NC_008709.1 3206978 3207358 D PFAM: ribosomal protein L17; KEGG: pmu:PM1389 50S ribosomal protein L17; 50S ribosomal protein L17 3206978..3207358 Psychromonas ingrahamii 37 4624323 YP_943934.1 CDS Ping_2616 NC_008709.1 3207438 3209213 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_2980 ABC transporter, ATP-binding/permease protein; ABC transporter ATP-binding protein complement(3207438..3209213) Psychromonas ingrahamii 37 4624324 YP_943935.1 CDS Ping_2617 NC_008709.1 3209375 3210685 R KEGG: cte:CT1834 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(3209375..3210685) Psychromonas ingrahamii 37 4624325 YP_943936.1 CDS Ping_2618 NC_008709.1 3210868 3212322 R PFAM: major facilitator superfamily MFS_1; KEGG: vch:VC1597 multidrug transporter, putative; major facilitator superfamily transporter complement(3210868..3212322) Psychromonas ingrahamii 37 4624326 YP_943937.1 CDS Ping_2619 NC_008709.1 3212727 3213323 R PFAM: AMMECR1 domain protein; KEGG: lpf:lpl1177 hypothetical protein; AMMECR1 domain-containing protein complement(3212727..3213323) Psychromonas ingrahamii 37 4624327 YP_943938.1 CDS Ping_2620 NC_008709.1 3213301 3214149 R PFAM: protein of unknown function DUF52; KEGG: hch:HCH_05946 predicted dioxygenase; hypothetical protein complement(3213301..3214149) Psychromonas ingrahamii 37 4624328 YP_943939.1 CDS Ping_2621 NC_008709.1 3214531 3215382 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: vfi:VF1108 chaperone protein DnaJ; chaperone DnaJ domain-containing protein complement(3214531..3215382) Psychromonas ingrahamii 37 4624329 YP_943940.1 CDS Ping_2622 NC_008709.1 3216058 3217026 D PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: vpa:VPA1470 hypothetical protein; peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG protein 3216058..3217026 Psychromonas ingrahamii 37 4624330 YP_943941.1 CDS Ping_2623 NC_008709.1 3217073 3217318 R KEGG: sdn:Sden_2824 major outer membrane lipoprotein, putative; major outer membrane lipoprotein complement(3217073..3217318) Psychromonas ingrahamii 37 4624331 YP_943942.1 CDS Ping_2624 NC_008709.1 3218315 3219013 D KEGG: pha:PSHAa1594 hypothetical protein; hypothetical protein 3218315..3219013 Psychromonas ingrahamii 37 4624332 YP_943943.1 CDS kefB NC_008709.1 3220514 3222112 D PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pat:Patl_2263 sodium/hydrogen exchanger; glutathione-regulated potassium-efflux system protein KefB 3220514..3222112 Psychromonas ingrahamii 37 4624334 YP_943944.1 CDS Ping_2627 NC_008709.1 3222230 3223822 R PFAM: Alkaline phosphatase; KEGG: hch:HCH_05826 alkaline phosphatase; alkaline phosphatase complement(3222230..3223822) Psychromonas ingrahamii 37 4624335 YP_943945.1 CDS Ping_2628 NC_008709.1 3224090 3224749 R TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: son:SO4715 hypothetical protein; hypothetical protein complement(3224090..3224749) Psychromonas ingrahamii 37 4624336 YP_943946.1 CDS Ping_2629 NC_008709.1 3225018 3225680 D PFAM: regulatory protein RecX; KEGG: sdn:Sden_0902 regulatory protein RecX; transcriptional regulator for RecA 3225018..3225680 Psychromonas ingrahamii 37 4624337 YP_943947.1 CDS Ping_2630 NC_008709.1 3225814 3227226 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3225814..3227226 Psychromonas ingrahamii 37 4624338 YP_943948.1 CDS Ping_2631 NC_008709.1 3227618 3227896 R KEGG: tcx:Tcr_2034 lipase-like; lipase-like protein complement(3227618..3227896) Psychromonas ingrahamii 37 4624340 YP_943949.1 CDS Ping_2632 NC_008709.1 3228018 3228779 R KEGG: ppr:PBPRB0428 hypothetical protein; hypothetical protein complement(3228018..3228779) Psychromonas ingrahamii 37 4624341 YP_943950.1 CDS Ping_2633 NC_008709.1 3229266 3229700 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ppr:PBPRB1771 putative thioredoxin 2; thioredoxin 2 complement(3229266..3229700) Psychromonas ingrahamii 37 4624361 YP_943951.1 CDS Ping_2634 NC_008709.1 3231072 3232091 R PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: mxa:MXAN_2232 pirin family protein; pirin domain-containing protein complement(3231072..3232091) Psychromonas ingrahamii 37 4624362 YP_943952.1 CDS Ping_2635 NC_008709.1 3232755 3233633 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3232755..3233633) Psychromonas ingrahamii 37 4624363 YP_943953.1 CDS Ping_2637 NC_008709.1 3235141 3235893 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ppr:PBPRB0483 hypothetical protein; type 12 methyltransferase 3235141..3235893 Psychromonas ingrahamii 37 4624365 YP_943954.1 CDS Ping_2638 NC_008709.1 3236087 3237265 R KEGG: ppr:PBPRA2669 hypothetical DnaJ domain protein; hypothetical protein complement(3236087..3237265) Psychromonas ingrahamii 37 4624366 YP_943955.1 CDS Ping_2639 NC_008709.1 3237617 3238207 R KEGG: cac:CAC1583 predicted P-loop ATPase; P-loop ATPase complement(3237617..3238207) Psychromonas ingrahamii 37 4624367 YP_943956.1 CDS Ping_2640 NC_008709.1 3239123 3239722 R PFAM: phage Tail Collar domain protein; KEGG: sde:Sde_3326 forkhead-associated; phage tail collar domain-containing protein complement(3239123..3239722) Psychromonas ingrahamii 37 4624368 YP_943957.1 CDS Ping_2641 NC_008709.1 3239736 3240323 R PFAM: phage Tail Collar domain protein; KEGG: sit:TM1040_3287 phage tail collar; phage tail collar domain-containing protein complement(3239736..3240323) Psychromonas ingrahamii 37 4624369 YP_943958.1 CDS Ping_2642 NC_008709.1 3240392 3241063 R hypothetical protein complement(3240392..3241063) Psychromonas ingrahamii 37 4624370 YP_943959.1 CDS Ping_2644 NC_008709.1 3243606 3244088 R KEGG: ppr:PBPRB1420 hypothetical protein; GreA/GreB family elongation factor complement(3243606..3244088) Psychromonas ingrahamii 37 4624372 YP_943960.1 CDS Ping_2645 NC_008709.1 3244286 3245995 D PFAM: phospholipid/glycerol acyltransferase; KEGG: pat:Patl_1245 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3244286..3245995 Psychromonas ingrahamii 37 4624373 YP_943961.1 CDS Ping_2646 NC_008709.1 3246284 3246634 D PFAM: Endoribonuclease L-PSP; KEGG: vfi:VFA0002 translation initiation inhibitor; endoribonuclease L-PSP 3246284..3246634 Psychromonas ingrahamii 37 4624374 YP_943962.1 CDS Ping_2647 NC_008709.1 3246831 3247727 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: cps:CPS_3391 membrane protein; hypothetical protein 3246831..3247727 Psychromonas ingrahamii 37 4624375 YP_943963.1 CDS Ping_2648 NC_008709.1 3248179 3248631 D PFAM: GCN5-related N-acetyltransferase; KEGG: vfi:VF0317 acetyltransferase; N-acetyltransferase GCN5 3248179..3248631 Psychromonas ingrahamii 37 4624376 YP_943964.1 CDS Ping_2649 NC_008709.1 3248738 3249907 R PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: cps:CPS_4896 hypothetical protein; major facilitator superfamily transporter complement(3248738..3249907) Psychromonas ingrahamii 37 4624377 YP_943965.1 CDS Ping_2650 NC_008709.1 3250029 3253079 R KEGG: sdn:Sden_0766 ammonium transporter; TIGRFAM: PAS sensor protein; diguanylate cyclase; ammonium transporter; PFAM: GGDEF domain containing protein; EAL domain protein; Rh family protein/ammonium transporter; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(3250029..3253079) Psychromonas ingrahamii 37 4624378 YP_943966.1 CDS Ping_2652 NC_008709.1 3253675 3254682 D PFAM: Integrase, catalytic region; KEGG: plu:plu3016 transposase, IS30 family; integrase catalytic subunit 3253675..3254682 Psychromonas ingrahamii 37 4625272 YP_943967.1 CDS Ping_2654 NC_008709.1 3255740 3256882 D KEGG: lpn:lpg2950 hypothetical protein; hypothetical protein 3255740..3256882 Psychromonas ingrahamii 37 4625275 YP_943968.1 CDS Ping_2655 NC_008709.1 3256886 3257767 D PFAM: lipopolysaccharide biosynthesis; KEGG: sat:SYN_03766 hypothetical membrane protein; lipopolysaccharide biosynthesis protein 3256886..3257767 Psychromonas ingrahamii 37 4625276 YP_943969.1 CDS Ping_2656 NC_008709.1 3257936 3258796 D hypothetical protein 3257936..3258796 Psychromonas ingrahamii 37 4625277 YP_943970.1 CDS Ping_2657 NC_008709.1 3259298 3261217 R PFAM: asparagine synthase; KEGG: mlo:mll5256 similar to asparagine synthetase; asparagine synthase complement(3259298..3261217) Psychromonas ingrahamii 37 4625278 YP_943971.1 CDS Ping_2658 NC_008709.1 3261218 3262177 R KEGG: hch:HCH_01195 hypothetical protein; hypothetical protein complement(3261218..3262177) Psychromonas ingrahamii 37 4625279 YP_943972.1 CDS Ping_2659 NC_008709.1 3262187 3263086 R SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: cya:CYA_2538 oxidoreductase, 2OG-Fe(II) oxygenase family; prolyl 4-hydroxylase subunit alpha complement(3262187..3263086) Psychromonas ingrahamii 37 4625280 YP_943973.1 CDS Ping_2660 NC_008709.1 3263104 3263391 R KEGG: cpe:CPE0468 hypothetical protein; hypothetical protein complement(3263104..3263391) Psychromonas ingrahamii 37 4625281 YP_943974.1 CDS Ping_2661 NC_008709.1 3263427 3264317 R KEGG: cpe:CPE0467 hypothetical protein; hypothetical protein complement(3263427..3264317) Psychromonas ingrahamii 37 4625282 YP_943975.1 CDS Ping_2662 NC_008709.1 3264332 3266026 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll5254 ABC transporter, ATP-binding protein; ABC transporter ATPase and inner membrane protein complement(3264332..3266026) Psychromonas ingrahamii 37 4625283 YP_943976.1 CDS Ping_2663 NC_008709.1 3266028 3266504 R KEGG: hch:HCH_01194 hypothetical protein; hypothetical protein complement(3266028..3266504) Psychromonas ingrahamii 37 4625284 YP_943977.1 CDS Ping_2665 NC_008709.1 3267469 3267639 R KEGG: ppr:PBPRB1247 hypothetical transposase; hypothetical protein complement(3267469..3267639) Psychromonas ingrahamii 37 4625286 YP_943978.1 CDS Ping_2666 NC_008709.1 3267946 3268929 R PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein; oxidoreductase domain-containing protein complement(3267946..3268929) Psychromonas ingrahamii 37 4625287 YP_943979.1 CDS Ping_2667 NC_008709.1 3268947 3269882 R PFAM: aldo/keto reductase; KEGG: sme:SMc01702 putative oxidoreductase protein; aldo/keto reductase complement(3268947..3269882) Psychromonas ingrahamii 37 4625288 YP_943980.1 CDS Ping_2668 NC_008709.1 3270015 3270995 R PFAM: aldo/keto reductase; KEGG: sde:Sde_1479 putative oxidoreducatse; aldo/keto reductase complement(3270015..3270995) Psychromonas ingrahamii 37 4625289 YP_943981.1 CDS Ping_2669 NC_008709.1 3271177 3272058 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vfi:VFA0053 transcriptional regulators, LysR family; LysR family transcriptional regulator 3271177..3272058 Psychromonas ingrahamii 37 4625290 YP_943982.1 CDS Ping_2670 NC_008709.1 3272452 3275151 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: tte:TTE1213 cation transport ATPase; P-type HAD superfamily ATPase 3272452..3275151 Psychromonas ingrahamii 37 4625291 YP_943983.1 CDS Ping_2671 NC_008709.1 3275184 3275873 R PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: sde:Sde_2941 glutamine amidotransferase related enzyme; peptidase C26 complement(3275184..3275873) Psychromonas ingrahamii 37 4625292 YP_943984.1 CDS Ping_2672 NC_008709.1 3275855 3276853 R KEGG: dde:Dde_1621 hypothetical protein; hypothetical protein complement(3275855..3276853) Psychromonas ingrahamii 37 4625293 YP_943985.1 CDS Ping_2673 NC_008709.1 3277179 3277667 D PFAM: protein of unknown function DUF1348; KEGG: sde:Sde_2823 response regulator receiver domain protein (CheY-like); hypothetical protein 3277179..3277667 Psychromonas ingrahamii 37 4625294 YP_943986.1 CDS Ping_2674 NC_008709.1 3277977 3278612 D PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; Male sterility C-terminal domain; KEGG: pat:Patl_1875 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3277977..3278612 Psychromonas ingrahamii 37 4625295 YP_943987.1 CDS Ping_2676 NC_008709.1 3279593 3280945 D KEGG: tdn:Tmden_0421 transporter, putative; transporter 3279593..3280945 Psychromonas ingrahamii 37 4625297 YP_943988.1 CDS Ping_2677 NC_008709.1 3281145 3281630 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0250 putative acetyltransferase, GnaT family; N-acetyltransferase GCN5 3281145..3281630 Psychromonas ingrahamii 37 4625298 YP_943989.1 CDS Ping_2678 NC_008709.1 3281762 3283108 R KEGG: noc:Noc_0468 hypothetical protein; hypothetical protein complement(3281762..3283108) Psychromonas ingrahamii 37 4625299 YP_943990.1 CDS Ping_2679 NC_008709.1 3283576 3283995 R hypothetical protein complement(3283576..3283995) Psychromonas ingrahamii 37 4625300 YP_943991.1 CDS Ping_2680 NC_008709.1 3284447 3284674 D PFAM: protein of unknown function DUF331; KEGG: pha:PSHAb0114 hypothetical protein; hypothetical protein 3284447..3284674 Psychromonas ingrahamii 37 4625301 YP_943992.1 CDS Ping_2681 NC_008709.1 3284858 3285127 R KEGG: cps:CPS_2997 hypothetical protein; hypothetical protein complement(3284858..3285127) Psychromonas ingrahamii 37 4625302 YP_943993.1 CDS Ping_2682 NC_008709.1 3285677 3286576 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 3285677..3286576 Psychromonas ingrahamii 37 4625303 YP_943994.1 CDS Ping_2683 NC_008709.1 3287016 3290465 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ctc:CTC01910 DNA repair helicase rad25; type III restriction enzyme, res subunit complement(3287016..3290465) Psychromonas ingrahamii 37 4625304 YP_943995.1 CDS Ping_2684 NC_008709.1 3290472 3290876 R PFAM: NUDIX hydrolase; KEGG: dps:DP2521 related to 7,8-dihydro-8-oxoguanine-triphosphatase; CTP pyrophosphohydrolase complement(3290472..3290876) Psychromonas ingrahamii 37 4625396 YP_943996.1 CDS Ping_2685 NC_008709.1 3291125 3291892 R PFAM: NERD domain protein; KEGG: neu:NE0846 hypothetical protein; NERD domain-containing protein complement(3291125..3291892) Psychromonas ingrahamii 37 4625397 YP_943997.1 CDS Ping_2687 NC_008709.1 3292586 3293539 R ribosome recycling factor complement(3292586..3293539) Psychromonas ingrahamii 37 4625399 YP_943998.1 CDS Ping_2688 NC_008709.1 3293546 3294514 R KEGG: sth:STH1792 hypothetical protein; hypothetical protein complement(3293546..3294514) Psychromonas ingrahamii 37 4625400 YP_943999.1 CDS Ping_2689 NC_008709.1 3294511 3294759 R hypothetical protein complement(3294511..3294759) Psychromonas ingrahamii 37 4625401 YP_944000.1 CDS Ping_2690 NC_008709.1 3294884 3296707 R KEGG: pfa:PFD0320c-1 hypothetical protein; peptidase complement(3294884..3296707) Psychromonas ingrahamii 37 4625402 YP_944001.1 CDS Ping_2691 NC_008709.1 3296718 3297866 R KEGG: bth:BT4603 hypothetical protein; hypothetical protein complement(3296718..3297866) Psychromonas ingrahamii 37 4625403 YP_944002.1 CDS Ping_2692 NC_008709.1 3297868 3300285 R PFAM: Heat shock protein 70; KEGG: bth:BT4602 chaperone protein DnaK; heat shock protein 70 complement(3297868..3300285) Psychromonas ingrahamii 37 4625404 YP_944003.1 CDS Ping_2694 NC_008709.1 3301912 3304944 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: vch:VC2621 extracellular nuclease-related protein; endonuclease/exonuclease/phosphatase complement(3301912..3304944) Psychromonas ingrahamii 37 4625406 YP_944004.1 CDS ushA NC_008709.1 3305298 3307031 D catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 3305298..3307031 Psychromonas ingrahamii 37 4625407 YP_944005.1 CDS Ping_2696 NC_008709.1 3307495 3308406 R PFAM: Auxin Efflux Carrier; KEGG: csa:Csal_3143 auxin efflux carrier; auxin efflux carrier complement(3307495..3308406) Psychromonas ingrahamii 37 4625408 YP_944006.1 CDS Ping_2697 NC_008709.1 3308884 3309807 D PFAM: histone deacetylase superfamily; KEGG: cps:CPS_1655 histone deacetylase family protein; histone deacetylase superfamily protein 3308884..3309807 Psychromonas ingrahamii 37 4625409 YP_944007.1 CDS Ping_2698 NC_008709.1 3310579 3310791 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: ppr:PBPRB0036 putative Cold shock-like protein; cold-shock DNA-binding domain-containing protein 3310579..3310791 Psychromonas ingrahamii 37 4625410 YP_944008.1 CDS Ping_2699 NC_008709.1 3311303 3311788 D KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative 3311303..3311788 Psychromonas ingrahamii 37 4625411 YP_944009.1 CDS Ping_2700 NC_008709.1 3311739 3312335 D KEGG: ppr:PBPRB1782 putative transposase; putative transposase 3311739..3312335 Psychromonas ingrahamii 37 4625412 YP_944010.1 CDS Ping_2701 NC_008709.1 3312858 3313427 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: noc:Noc_2438 sigma 54 modulation protein/ribosomal protein S30EA; cold-shock DNA-binding domain-containing protein complement(3312858..3313427) Psychromonas ingrahamii 37 4625413 YP_944011.1 CDS Ping_2702 NC_008709.1 3313510 3315894 R KEGG: tcx:Tcr_1937 diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein, family 3; diguanylate cyclase complement(3313510..3315894) Psychromonas ingrahamii 37 4625414 YP_944012.1 CDS Ping_2703 NC_008709.1 3316343 3316936 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sdn:Sden_0759 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 3316343..3316936 Psychromonas ingrahamii 37 4625415 YP_944013.1 CDS Ping_2704 NC_008709.1 3317310 3319232 D PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: sde:Sde_0733 putative serine protein kinase, PrkA; putative serine protein kinase PrkA 3317310..3319232 Psychromonas ingrahamii 37 4625883 YP_944014.1 CDS Ping_2705 NC_008709.1 3319323 3320597 D PFAM: protein of unknown function DUF444; KEGG: sde:Sde_0732 hypothetical protein; hypothetical protein 3319323..3320597 Psychromonas ingrahamii 37 4625884 YP_944015.1 CDS Ping_2706 NC_008709.1 3320594 3322117 D PFAM: SpoVR family protein; KEGG: pen:PSEEN0422 hypothetical protein; SpoVR family protein 3320594..3322117 Psychromonas ingrahamii 37 4625885 YP_944016.1 CDS Ping_2707 NC_008709.1 3322391 3323629 R KEGG: rba:RB13110 probable diadenosine tetraphosphatase; metallophosphoesterase complement(3322391..3323629) Psychromonas ingrahamii 37 4625886 YP_944017.1 CDS Ping_2708 NC_008709.1 3323729 3324130 R KEGG: vch:VC1610 hypothetical protein; hypothetical protein complement(3323729..3324130) Psychromonas ingrahamii 37 4625887 YP_944018.1 CDS Ping_2709 NC_008709.1 3324453 3325817 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ppr:PBPRB1001 hypothetical protein; MATE efflux family protein complement(3324453..3325817) Psychromonas ingrahamii 37 4625888 YP_944019.1 CDS Ping_2710 NC_008709.1 3325916 3326851 R TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: pha:PSHAa2865 polyprenyltransferase; protoheme IX farnesyltransferase complement(3325916..3326851) Psychromonas ingrahamii 37 4625889 YP_944020.1 CDS Ping_2711 NC_008709.1 3326863 3327990 R PFAM: cytochrome oxidase assembly; KEGG: pha:PSHAa2866 cytochrome oxidase assembly protein; cytochrome oxidase assembly complement(3326863..3327990) Psychromonas ingrahamii 37 4625890 YP_944021.1 CDS Ping_2712 NC_008709.1 3328088 3328588 R KEGG: pha:PSHAa2867 transmembrane cytochrome oxidase associated protein; transmembrane cytochrome oxidase associated protein complement(3328088..3328588) Psychromonas ingrahamii 37 4625891 YP_944022.1 CDS Ping_2713 NC_008709.1 3328609 3329358 R KEGG: pha:PSHAa2868 transmembrane cytochrome oxidase complex biogenesis factor; transmembrane cytochrome oxidase complex biogenesis factor complement(3328609..3329358) Psychromonas ingrahamii 37 4625892 YP_944023.1 CDS Ping_2714 NC_008709.1 3329359 3330246 R PFAM: cytochrome c oxidase, subunit III; KEGG: pha:PSHAa2869 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III complement(3329359..3330246) Psychromonas ingrahamii 37 4625893 YP_944024.1 CDS Ping_2715 NC_008709.1 3330264 3330782 R involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein complement(3330264..3330782) Psychromonas ingrahamii 37 4625894 YP_944025.1 CDS cyoB NC_008709.1 3330793 3332397 R PFAM: cytochrome c oxidase, subunit I; KEGG: pha:PSHAa2871 cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I CyoB complement(3330793..3332397) Psychromonas ingrahamii 37 4625895 YP_944026.1 CDS Ping_2717 NC_008709.1 3332397 3333968 R PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region; KEGG: son:SO4606 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II complement(3332397..3333968) Psychromonas ingrahamii 37 4625896 YP_944027.1 CDS Ping_2718 NC_008709.1 3334458 3334829 D KEGG: cps:CPS_1415 hypothetical protein; hypothetical protein 3334458..3334829 Psychromonas ingrahamii 37 4625897 YP_944028.1 CDS Ping_2719 NC_008709.1 3335075 3335602 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: vfi:VF0653 23S rRNA methyltransferase; tRNA/rRNA methyltransferase SpoU 3335075..3335602 Psychromonas ingrahamii 37 4625898 YP_944029.1 CDS Ping_2720 NC_008709.1 3335726 3336385 D PFAM: DSBA oxidoreductase; KEGG: ppr:PBPRB0337 hypothetical 2-hydroxychromene-2-carboxylateisomerase family protein; thiol:disulfide interchange protein DsbA 3335726..3336385 Psychromonas ingrahamii 37 4625899 YP_944030.1 CDS Ping_2721 NC_008709.1 3336543 3336845 D KEGG: ppr:PBPRA1961 hypothetical protein; hypothetical protein 3336543..3336845 Psychromonas ingrahamii 37 4625900 YP_944031.1 CDS Ping_2722 NC_008709.1 3336940 3337740 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: cps:CPS_3106 4-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 3336940..3337740 Psychromonas ingrahamii 37 4625901 YP_944032.1 CDS Ping_2723 NC_008709.1 3338771 3340429 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: cps:CPS_4627 serine protease, trypsin family; peptidase S1 and S6, chymotrypsin/Hap 3338771..3340429 Psychromonas ingrahamii 37 4626385 YP_944033.1 CDS Ping_2724 NC_008709.1 3340516 3341904 D exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 3340516..3341904 Psychromonas ingrahamii 37 4626386 YP_944034.1 CDS Ping_2725 NC_008709.1 3342223 3343629 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunit IIBC 3342223..3343629 Psychromonas ingrahamii 37 4626387 YP_944035.1 CDS Ping_2726 NC_008709.1 3344128 3345258 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: vvy:VVA0696 glycine cleavage system T protein; glycine cleavage system T protein complement(3344128..3345258) Psychromonas ingrahamii 37 4626388 YP_944036.1 CDS Ping_2727 NC_008709.1 3345370 3345996 R PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: ppr:PBPRB1321 putative transcriptional regulator, HTH_3family; DNA-binding transcriptional regulator complement(3345370..3345996) Psychromonas ingrahamii 37 4626389 YP_944037.1 CDS Ping_2728 NC_008709.1 3346329 3346706 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3346329..3346706 Psychromonas ingrahamii 37 4626390 YP_944038.1 CDS Ping_2729 NC_008709.1 3346835 3349735 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3346835..3349735 Psychromonas ingrahamii 37 4626391 YP_944039.1 CDS Ping_2730 NC_008709.1 3350274 3352049 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase complement(3350274..3352049) Psychromonas ingrahamii 37 4626392 YP_944040.1 CDS Ping_2731 NC_008709.1 3352505 3352792 D hypothetical protein 3352505..3352792 Psychromonas ingrahamii 37 4625918 YP_944041.1 CDS Ping_2732 NC_008709.1 3352769 3353620 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sfr:Sfri_1536 diguanylate cyclase; diguanylate cyclase complement(3352769..3353620) Psychromonas ingrahamii 37 4625919 YP_944042.1 CDS Ping_2733 NC_008709.1 3354702 3355613 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: hch:HCH_04023 predicted Co/Zn/Cd cation transporters; cation diffusion facilitator family transporter 3354702..3355613 Psychromonas ingrahamii 37 4625920 YP_944043.1 CDS Ping_2734 NC_008709.1 3355765 3356190 R PFAM: UspA domain protein; KEGG: eci:UTI89_C0610 universal stress protein UspG; universal stress protein complement(3355765..3356190) Psychromonas ingrahamii 37 4625921 YP_944044.1 CDS Ping_2736 NC_008709.1 3356552 3357436 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_4662 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3356552..3357436) Psychromonas ingrahamii 37 4625997 YP_944045.1 CDS Ping_2737 NC_008709.1 3357714 3358658 D in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution; hypothetical protein 3357714..3358658 Psychromonas ingrahamii 37 4625998 YP_944046.1 CDS Ping_2738 NC_008709.1 3358917 3360167 D catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 3358917..3360167 Psychromonas ingrahamii 37 4625999 YP_944047.1 CDS Ping_2741 NC_008709.1 3362628 3363908 D PFAM: sodium/hydrogen exchanger; KEGG: vvy:VV2961 putative Na+/H+ antiporter; sodium/hydrogen exchanger 3362628..3363908 Psychromonas ingrahamii 37 4626002 YP_944048.1 CDS Ping_2742 NC_008709.1 3364126 3365052 R KEGG: vpa:VPA0241 hypothetical protein; hypothetical protein complement(3364126..3365052) Psychromonas ingrahamii 37 4626003 YP_944049.1 CDS Ping_2743 NC_008709.1 3365214 3366005 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: vvy:VVA0480 transcriptional regulator; GntR family transcriptional regulator complement(3365214..3366005) Psychromonas ingrahamii 37 4626004 YP_944050.1 CDS Ping_2744 NC_008709.1 3366002 3367726 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvu:VV21670 ABC-type Fe3+ transport system, permease component; ABC transporter binding protein inner membrane protein complement(3366002..3367726) Psychromonas ingrahamii 37 4626005 YP_944051.1 CDS Ping_2745 NC_008709.1 3367737 3368840 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA0238 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein complement(3367737..3368840) Psychromonas ingrahamii 37 4626006 YP_944052.1 CDS Ping_2746 NC_008709.1 3368938 3369945 R PFAM: extracellular solute-binding protein, family 1; KEGG: vvu:VV21665 ABC-type Fe3+ transport system, periplasmic component; ABC transporter substrate-binding protein complement(3368938..3369945) Psychromonas ingrahamii 37 4626007 YP_944053.1 CDS Ping_2747 NC_008709.1 3370205 3371311 D catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase 3370205..3371311 Psychromonas ingrahamii 37 4626008 YP_944054.1 CDS Ping_2748 NC_008709.1 3371308 3372714 D catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 3371308..3372714 Psychromonas ingrahamii 37 4626009 YP_944055.1 CDS Ping_2749 NC_008709.1 3372695 3373582 D catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 3372695..3373582 Psychromonas ingrahamii 37 4626010 YP_944056.1 CDS garR NC_008709.1 3373800 3374675 R PFAM: oxidoreductase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: son:SO2771 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase complement(3373800..3374675) Psychromonas ingrahamii 37 4626011 YP_944057.1 CDS Ping_2751 NC_008709.1 3375028 3375939 D hypothetical protein 3375028..3375939 Psychromonas ingrahamii 37 4626012 YP_944058.1 CDS Ping_2752 NC_008709.1 3376040 3377488 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(3376040..3377488) Psychromonas ingrahamii 37 4626013 YP_944059.1 CDS Ping_2753 NC_008709.1 3377478 3378212 R TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: vpa:VP1709 DevB protein; 6-phosphogluconolactonase complement(3377478..3378212) Psychromonas ingrahamii 37 4626014 YP_944060.1 CDS Ping_2754 NC_008709.1 3378214 3379713 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(3378214..3379713) Psychromonas ingrahamii 37 4626015 YP_944061.1 CDS Ping_2755 NC_008709.1 3380283 3381227 D TIGRFAM: siroheme synthase; KEGG: cps:CPS_0537 siroheme synthase, N-terminal component; siroheme synthase 3380283..3381227 Psychromonas ingrahamii 37 4623771 YP_944062.1 CDS Ping_2756 NC_008709.1 3381379 3382173 R SMART: Water Stress and Hypersensitive response; KEGG: mxa:MXAN_6829 putative similar to late embryogenesis abundant proteins; water stress/hypersensitive response protein complement(3381379..3382173) Psychromonas ingrahamii 37 4623772 YP_944063.1 CDS Ping_2757 NC_008709.1 3382776 3383009 R hypothetical protein complement(3382776..3383009) Psychromonas ingrahamii 37 4623773 YP_944064.1 CDS Ping_2758 NC_008709.1 3383335 3384681 D PFAM: MgtE integral membrane region; MgtE intracellular region; KEGG: pha:PSHAa0712 magnesium transporter; MgtE integral membrane protein 3383335..3384681 Psychromonas ingrahamii 37 4623774 YP_944065.1 CDS Ping_2759 NC_008709.1 3384743 3385591 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_2309 regulatory protein, LysR; LysR family transcriptional regulator complement(3384743..3385591) Psychromonas ingrahamii 37 4623775 YP_944066.1 CDS Ping_2760 NC_008709.1 3386156 3387364 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: vpa:VP2082 acetate kinase; acetate kinase 3386156..3387364 Psychromonas ingrahamii 37 4623776 YP_944067.1 CDS Ping_2761 NC_008709.1 3387525 3387893 R KEGG: ppr:PBPRB1752 hypothetical protein; hypothetical protein complement(3387525..3387893) Psychromonas ingrahamii 37 4623777 YP_944068.1 CDS Ping_2762 NC_008709.1 3388349 3391009 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(3388349..3391009) Psychromonas ingrahamii 37 4623778 YP_944069.1 CDS Ping_2763 NC_008709.1 3391392 3392657 R PFAM: MscS Mechanosensitive ion channel; KEGG: dps:DP0210 hypothetical protein; mechanosensitive ion channel protein MscS complement(3391392..3392657) Psychromonas ingrahamii 37 4623779 YP_944070.1 CDS Ping_2764 NC_008709.1 3393151 3393750 R KEGG: sdn:Sden_2944 hypothetical protein; hypothetical protein complement(3393151..3393750) Psychromonas ingrahamii 37 4623780 YP_944071.1 CDS Ping_2765 NC_008709.1 3393969 3394898 R KEGG: ppr:PBPRB1356 hypothetical protein; Zn-dependent enzyme, member of deacylase/carboxypeptidase family protein complement(3393969..3394898) Psychromonas ingrahamii 37 4623781 YP_944072.1 CDS Ping_2766 NC_008709.1 3402676 3403152 D PFAM: thioesterase superfamily protein; KEGG: cps:CPS_0440 thioesterase family protein; thioesterase superfamily protein 3402676..3403152 Psychromonas ingrahamii 37 4623785 YP_944073.1 CDS Ping_2767 NC_008709.1 3403616 3405757 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ppr:PBPRA2113 hypothetical protein; mercuric reductase, membrane-associated 3403616..3405757 Psychromonas ingrahamii 37 4623786 YP_944074.1 CDS Ping_2768 NC_008709.1 3405754 3406899 D KEGG: vvy:VV1412 ABC-type uncharacterized transport system, periplasmic component; putative ABC transporter solute-binding protein 3405754..3406899 Psychromonas ingrahamii 37 4623787 YP_944075.1 CDS Ping_2769 NC_008709.1 3406918 3408660 D KEGG: vpa:VP1195 putative ABC transporter, permease protein; ABC transporter permease 3406918..3408660 Psychromonas ingrahamii 37 4627054 YP_944076.1 CDS Ping_2770 NC_008709.1 3408626 3409267 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRA2116 putative ABC-type uncharacterized transport system ATPase component; ABC transporter ATP-binding protein 3408626..3409267 Psychromonas ingrahamii 37 4627055 YP_944077.1 CDS Ping_2771 NC_008709.1 3409304 3409921 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ppr:PBPRA2117 putative phosphatidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase 3409304..3409921 Psychromonas ingrahamii 37 4627056 YP_944078.1 CDS Ping_2772 NC_008709.1 3409989 3410543 R PFAM: Syd family protein; KEGG: vvy:VV0888 SecY interacting protein Syd; Syd family protein complement(3409989..3410543) Psychromonas ingrahamii 37 4627057 YP_944079.1 CDS queF NC_008709.1 3410614 3411471 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3410614..3411471 Psychromonas ingrahamii 37 4627058 YP_944080.1 CDS Ping_2774 NC_008709.1 3411484 3413712 D KEGG: vpa:VP0700 hypothetical protein; hypothetical protein 3411484..3413712 Psychromonas ingrahamii 37 4627059 YP_944081.1 CDS Ping_2775 NC_008709.1 3413932 3415284 D PFAM: conserved hypothetical protein 730; KEGG: vfi:VF0595 conserved hypothetical protein; hypothetical protein 3413932..3415284 Psychromonas ingrahamii 37 4627060 YP_944082.1 CDS xni NC_008709.1 3415378 3416166 D has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 3415378..3416166 Psychromonas ingrahamii 37 4627061 YP_944083.1 CDS Ping_2777 NC_008709.1 3417017 3417562 D KEGG: neu:NE1575 hypothetical protein; hypothetical protein 3417017..3417562 Psychromonas ingrahamii 37 4627062 YP_944084.1 CDS Ping_2778 NC_008709.1 3418097 3418900 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pca:Pcar_0903 putative short chain oxidoreductase; short-chain dehydrogenase/reductase SDR complement(3418097..3418900) Psychromonas ingrahamii 37 4627063 YP_944085.1 CDS Ping_2779 NC_008709.1 3419147 3420538 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: jan:Jann_1720 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase E3 component of 3 enzyme complexes complement(3419147..3420538) Psychromonas ingrahamii 37 4627064 YP_944086.1 CDS Ping_2780 NC_008709.1 3420540 3421835 R PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mag:amb2318 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzyme; dihydrolipoamide dehydrogenase E3 component of 3 enzyme complexes complement(3420540..3421835) Psychromonas ingrahamii 37 4627065 YP_944087.1 CDS Ping_2781 NC_008709.1 3421851 3422381 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cps:CPS_3057 glyoxalase family protein; bleomycin resistance protein complement(3421851..3422381) Psychromonas ingrahamii 37 4627066 YP_944088.1 CDS Ping_2782 NC_008709.1 3422386 3424569 R PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; KEGG: bms:BRA0032 acetoin dehydrogenase, alpha/beta subunit, putative; pyruvate dehydrogenase complex, E1 beta subunit complement(3422386..3424569) Psychromonas ingrahamii 37 4627067 YP_944089.1 CDS Ping_2783 NC_008709.1 3424625 3426070 R PFAM: aldehyde dehydrogenase; KEGG: mlo:mll5719 succinate-semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase (NAD(P)(+)) complement(3424625..3426070) Psychromonas ingrahamii 37 4627068 YP_944090.1 CDS Ping_2784 NC_008709.1 3426091 3427380 R PFAM: peptidase M24; KEGG: hma:rrnB0212 aminopeptidase; peptidase M24 complement(3426091..3427380) Psychromonas ingrahamii 37 4627069 YP_944091.1 CDS Ping_2785 NC_008709.1 3427424 3428476 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rme:Rmet_1905 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(3427424..3428476) Psychromonas ingrahamii 37 4627070 YP_944092.1 CDS Ping_2786 NC_008709.1 3428477 3428716 R hypothetical protein complement(3428477..3428716) Psychromonas ingrahamii 37 4627071 YP_944093.1 CDS Ping_2787 NC_008709.1 3428731 3430218 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK3228 ribose ABC transporter (ATP-binding protein); sugar ABC transporter ATP-binding protein complement(3428731..3430218) Psychromonas ingrahamii 37 4627072 YP_944094.1 CDS Ping_2788 NC_008709.1 3430220 3431164 R PFAM: inner-membrane translocator; KEGG: gka:GK3227 ribose ABC transporter (permease); ABC-type transporter for ribose/xylose/arabinose/galactoside systems, permease complement(3430220..3431164) Psychromonas ingrahamii 37 4627073 YP_944095.1 CDS Ping_2789 NC_008709.1 3431189 3432160 R PFAM: inner-membrane translocator; KEGG: bsu:BG10880 D-ribose transport system permease protein; ABC ribose transporter permease component complement(3431189..3432160) Psychromonas ingrahamii 37 4626784 YP_944096.1 CDS Ping_2790 NC_008709.1 3432323 3433261 R KEGG: atc:AGR_L_2023 bifunctional carbohydrate binding and transport protein; bifunctional carbohydrate binding and transport protein complement(3432323..3433261) Psychromonas ingrahamii 37 4626785 YP_944097.1 CDS Ping_2791 NC_008709.1 3433557 3435191 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: ilo:IL2280 chaperonin GroEL (HSP60 family); chaperonin Cpn60, GroEL, large subunit of GroESL 3433557..3435191 Psychromonas ingrahamii 37 4626786 YP_944098.1 CDS Ping_2792 NC_008709.1 3435772 3437499 D KEGG: son:SO3733 hypothetical protein; hypothetical protein 3435772..3437499 Psychromonas ingrahamii 37 4626787 YP_944099.1 CDS Ping_2793 NC_008709.1 3437692 3438987 D PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: ppr:PBPRA0835 putative xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease 3437692..3438987 Psychromonas ingrahamii 37 4626788 YP_944100.1 CDS Ping_2794 NC_008709.1 3439115 3440041 R Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase complement(3439115..3440041) Psychromonas ingrahamii 37 4626789 YP_944101.1 CDS Ping_2795 NC_008709.1 3440164 3441774 R PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ppr:PBPRA2314 putative FAD-dependent dehydrogenase; FAD dependent oxidoreductase complement(3440164..3441774) Psychromonas ingrahamii 37 4626790 YP_944102.1 CDS Ping_2796 NC_008709.1 3442037 3442477 D KEGG: pfa:PFE1325w hypothetical protein; hypothetical protein 3442037..3442477 Psychromonas ingrahamii 37 4626791 YP_944103.1 CDS Ping_2797 NC_008709.1 3442537 3443535 R TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: vvu:VV20671 membrane protease subunit; HflC protein complement(3442537..3443535) Psychromonas ingrahamii 37 4626792 YP_944104.1 CDS Ping_2798 NC_008709.1 3443532 3444605 R TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: vvu:VV20670 membrane protease subunit; HflK protein complement(3443532..3444605) Psychromonas ingrahamii 37 4626793 YP_944105.1 CDS Ping_2799 NC_008709.1 3444832 3445296 R PFAM: GCN5-related N-acetyltransferase; KEGG: vfi:VF1344 acetyltransferase; N-acetyltransferase GCN5 complement(3444832..3445296) Psychromonas ingrahamii 37 4626794 YP_944106.1 CDS Ping_2800 NC_008709.1 3445530 3446729 R PFAM: major facilitator superfamily MFS_1; KEGG: vch:VC1618 multidrug resistance protein, putative; major facilitator superfamily transporter complement(3445530..3446729) Psychromonas ingrahamii 37 4626795 YP_944107.1 CDS Ping_2801 NC_008709.1 3446823 3447707 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_2850 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator 3446823..3447707 Psychromonas ingrahamii 37 4626796 YP_944108.1 CDS Ping_2802 NC_008709.1 3447708 3448448 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cvi:CV3107 probable two-component response regulator; winged helix family two component transcriptional regulator complement(3447708..3448448) Psychromonas ingrahamii 37 4626797 YP_944109.1 CDS Ping_2803 NC_008709.1 3448624 3449262 R KEGG: ath:At1g03030 phosphoribulokinase/uridine kinase family protein; phosphoribulokinase/uridine kinase family protein complement(3448624..3449262) Psychromonas ingrahamii 37 4626798 YP_944110.1 CDS Ping_2804 NC_008709.1 3449259 3450200 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sdy:SDY_4130 putative periplasmic ribose-binding protein of ABC transport system; LacI family transcriptional regulator complement(3449259..3450200) Psychromonas ingrahamii 37 4626799 YP_944111.1 CDS Ping_2805 NC_008709.1 3450197 3452707 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: pmu:PM1380 hybrid histidine protein kinase-phosphate acceptor regulatory protein; sensor histidine kinase/response regulator fused protein, ATPase domain complement(3450197..3452707) Psychromonas ingrahamii 37 4625072 YP_944112.1 CDS Ping_2806 NC_008709.1 3452852 3453793 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:bll5782 ABC transporter sugar-binding protein; LacI family transcriptional regulator complement(3452852..3453793) Psychromonas ingrahamii 37 4625073 YP_944113.1 CDS Ping_2807 NC_008709.1 3453873 3454889 R PFAM: inner-membrane translocator; KEGG: mlo:mll3597 ribose ABC transporter, permease protein; inner-membrane translocator complement(3453873..3454889) Psychromonas ingrahamii 37 4625074 YP_944114.1 CDS Ping_2808 NC_008709.1 3454925 3456457 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcn:Bcen_1063 ABC transporter related; ABC transporter ATP-binding protein complement(3454925..3456457) Psychromonas ingrahamii 37 4625075 YP_944115.1 CDS Ping_2810 NC_008709.1 3457411 3457887 R TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: sgl:SG1630 phosphohistidine phosphatase; phosphohistidine phosphatase SixA complement(3457411..3457887) Psychromonas ingrahamii 37 4625077 YP_944116.1 CDS Ping_2811 NC_008709.1 3457932 3458081 R hypothetical protein complement(3457932..3458081) Psychromonas ingrahamii 37 4625078 YP_944117.1 CDS Ping_2812 NC_008709.1 3458434 3459393 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: ilo:IL0995 MoxR-like ATPase; MoxR-like ATPase 3458434..3459393 Psychromonas ingrahamii 37 4625079 YP_944118.1 CDS Ping_2813 NC_008709.1 3459393 3460361 D PFAM: protein of unknown function DUF58; KEGG: pat:Patl_1661 protein of unknown function DUF58; hypothetical protein 3459393..3460361 Psychromonas ingrahamii 37 4625080 YP_944119.1 CDS Ping_2814 NC_008709.1 3460345 3460851 D KEGG: lpp:lpp2915 hypothetical protein; hypothetical protein 3460345..3460851 Psychromonas ingrahamii 37 4625081 YP_944120.1 CDS Ping_2815 NC_008709.1 3460844 3461827 D PFAM: von Willebrand factor, type A; KEGG: ppr:PBPRB1845 conserved hypothetical protein; von Willebrand factor type A domain-containing protein 3460844..3461827 Psychromonas ingrahamii 37 4625082 YP_944121.1 CDS Ping_2816 NC_008709.1 3461817 3463790 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pat:Patl_1658 TPR repeat; hypothetical protein 3461817..3463790 Psychromonas ingrahamii 37 4625083 YP_944122.1 CDS Ping_2817 NC_008709.1 3463790 3465457 D KEGG: pha:PSHAa0960 hypothetical protein; hypothetical protein 3463790..3465457 Psychromonas ingrahamii 37 4625084 YP_944123.1 CDS Ping_2818 NC_008709.1 3465823 3466836 D SMART: extracellular solute-binding protein, family 3; KEGG: hch:HCH_05807 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; ABC amino acid transporter extracellular solute-binding protein 3465823..3466836 Psychromonas ingrahamii 37 4625085 YP_944124.1 CDS Ping_2819 NC_008709.1 3466857 3468074 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF1533 general L-amino acid transport system permease protein AapQ; polar amino acid ABC transporter inner membrane protein 3466857..3468074 Psychromonas ingrahamii 37 4625086 YP_944125.1 CDS Ping_2820 NC_008709.1 3468076 3469155 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_1132 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane protein 3468076..3469155 Psychromonas ingrahamii 37 4625087 YP_944126.1 CDS Ping_2821 NC_008709.1 3469165 3469911 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VF1535 general L-amino acid transport ATP-binding protein AapP; ABC transporter for amino acids ATP-binding protein 3469165..3469911 Psychromonas ingrahamii 37 4625088 YP_944127.1 CDS Ping_2822 NC_008709.1 3470522 3471535 D SMART: extracellular solute-binding protein, family 3; KEGG: hch:HCH_05807 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; ABC amino acid transporter extracellular solute-binding protein 3470522..3471535 Psychromonas ingrahamii 37 4625089 YP_944128.1 CDS Ping_2823 NC_008709.1 3471556 3472773 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF1533 general L-amino acid transport system permease protein AapQ; polar amino acid ABC transporter inner membrane protein 3471556..3472773 Psychromonas ingrahamii 37 4625090 YP_944129.1 CDS Ping_2824 NC_008709.1 3472775 3473854 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_1132 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane protein 3472775..3473854 Psychromonas ingrahamii 37 4626268 YP_944130.1 CDS Ping_2825 NC_008709.1 3473864 3474610 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvy:VV1554 ABC-type polar amino acid transport system, ATPase component; ABC transporter for amino acids ATP-binding protein 3473864..3474610 Psychromonas ingrahamii 37 4626269 YP_944131.1 CDS Ping_2826 NC_008709.1 3474710 3475165 R PFAM: protein of unknown function DUF785; KEGG: sde:Sde_2034 transglutaminase-like; aspartyl protease complement(3474710..3475165) Psychromonas ingrahamii 37 4626270 YP_944132.1 CDS Ping_2827 NC_008709.1 3475269 3476294 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sde:Sde_2033 hypothetical protein; succinylglutamate desuccinylase complement(3475269..3476294) Psychromonas ingrahamii 37 4626271 YP_944133.1 CDS Ping_2828 NC_008709.1 3476308 3477216 R TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; KEGG: sde:Sde_2032 ammonium transporter; alpha-L-glutamate ligase complement(3476308..3477216) Psychromonas ingrahamii 37 4626272 YP_944134.1 CDS Ping_2829 NC_008709.1 3477578 3478462 R PFAM: MscS Mechanosensitive ion channel; KEGG: cps:CPS_1934 mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS complement(3477578..3478462) Psychromonas ingrahamii 37 4626273 YP_944135.1 CDS Ping_2830 NC_008709.1 3478496 3479458 R PFAM: Mg2+ transporter protein, CorA family protein; KEGG: tcx:Tcr_0935 Mg2+ transporter protein, CorA-like; Mg2+ transporter protein, CorA family protein complement(3478496..3479458) Psychromonas ingrahamii 37 4626274 YP_944136.1 CDS Ping_2831 NC_008709.1 3479708 3480382 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF1585 histidine transport system permease protein HisM; polar amino acid ABC transporter inner membrane protein complement(3479708..3480382) Psychromonas ingrahamii 37 4626275 YP_944137.1 CDS Ping_2832 NC_008709.1 3480385 3481125 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRA2740 putative ABC-type arginine transport system, permease component; polar amino acid ABC transporter inner membrane protein complement(3480385..3481125) Psychromonas ingrahamii 37 4626276 YP_944138.1 CDS Ping_2833 NC_008709.1 3481234 3482010 R PFAM: extracellular solute-binding protein, family 3; KEGG: vch:VC1863 polar amino acid transport system substrate-binding protein; ABC amino acid transporter extracellular solute-binding protein complement(3481234..3482010) Psychromonas ingrahamii 37 4626277 YP_944139.1 CDS Ping_2834 NC_008709.1 3482053 3482859 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvu:VV12101 ABC-type histidine transport system, ATPase component; ABC transporter for amino acids ATP-binding protein complement(3482053..3482859) Psychromonas ingrahamii 37 4626278 YP_944140.1 CDS Ping_2835 NC_008709.1 3483209 3483790 D PFAM: GPR1/FUN34/yaaH family protein; KEGG: cvi:CV0521 probable membrane protein; GPR1/FUN34/yaaH family protein 3483209..3483790 Psychromonas ingrahamii 37 4626279 YP_944141.1 CDS Ping_2836 NC_008709.1 3483862 3484623 R PFAM: protein of unknown function DUF548; KEGG: pha:PSHAa0362 hypothetical protein; hypothetical protein complement(3483862..3484623) Psychromonas ingrahamii 37 4626280 YP_944142.1 CDS Ping_2837 NC_008709.1 3484775 3489337 R PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: son:SO0840 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase; carbamoyl-phosphate synthase subunit L complement(3484775..3489337) Psychromonas ingrahamii 37 4626281 YP_944143.1 CDS Ping_2838 NC_008709.1 3489707 3490450 R PFAM: nuclease (SNase domain protein); KEGG: pen:PSEEN0326 nuclease, staphylococcal nuclease homologue; nuclease complement(3489707..3490450) Psychromonas ingrahamii 37 4626282 YP_944144.1 CDS Ping_2839 NC_008709.1 3490789 3491259 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ppr:PBPRB1493 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 3490789..3491259 Psychromonas ingrahamii 37 4626283 YP_944145.1 CDS Ping_2840 NC_008709.1 3491265 3491474 R PFAM: regulatory protein, LysR; KEGG: vvy:VVA1564 transcriptional regulator; LysR family transcriptional regulator complement(3491265..3491474) Psychromonas ingrahamii 37 4626284 YP_944146.1 CDS Ping_2841 NC_008709.1 3491591 3492994 D PFAM: glycoside hydrolase, family 1; KEGG: eca:ECA1871 6-phospho-beta-glucosidase; glycoside hydrolase 3491591..3492994 Psychromonas ingrahamii 37 4626285 YP_944147.1 CDS Ping_2842 NC_008709.1 3493156 3493524 R hypothetical protein complement(3493156..3493524) Psychromonas ingrahamii 37 4626286 YP_944148.1 CDS Ping_2843 NC_008709.1 3494224 3495438 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: cps:CPS_4324 type I secretion membrane fusion protein, HlyD family; type I secretion membrane fusion protein, HlyD family protein complement(3494224..3495438) Psychromonas ingrahamii 37 4625868 YP_944149.1 CDS Ping_2844 NC_008709.1 3495428 3497689 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4325 ABC transporter, ATP-binding/permease protein; ABC transporter ATP-binding protein complement(3495428..3497689) Psychromonas ingrahamii 37 4625869 YP_944150.1 CDS Ping_2845 NC_008709.1 3497691 3499034 R PFAM: outer membrane efflux protein; KEGG: cps:CPS_4326 outer membrane efflux protein; outer membrane efflux protein complement(3497691..3499034) Psychromonas ingrahamii 37 4625870 YP_944151.1 CDS Ping_2846 NC_008709.1 3499183 3501852 R PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cps:CPS_4327 TPR domain protein; sulfotransferase complement(3499183..3501852) Psychromonas ingrahamii 37 4625871 YP_944152.1 CDS Ping_2847 NC_008709.1 3502434 3507533 R KEGG: cps:CPS_4328 cadherin domain protein; cadherin domain-containing protein complement(3502434..3507533) Psychromonas ingrahamii 37 4625872 YP_944153.1 CDS Ping_2848 NC_008709.1 3508568 3522010 R KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; hemagglutinin/hemolysin-like protein complement(3508568..3522010) Psychromonas ingrahamii 37 4625873 YP_944154.1 CDS Ping_2849 NC_008709.1 3523197 3526475 R KEGG: dps:DP2105 hypothetical protein; RTX toxin-like protein complement(3523197..3526475) Psychromonas ingrahamii 37 4625874 YP_944155.1 CDS Ping_2850 NC_008709.1 3527673 3528449 R KEGG: sdn:Sden_1914 hypothetical protein; hypothetical protein complement(3527673..3528449) Psychromonas ingrahamii 37 4625875 YP_944156.1 CDS Ping_2851 NC_008709.1 3528932 3529555 R PFAM: Cold-shock protein, DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; KEGG: pat:Patl_2628 cold-shock DNA-binding domain protein; hypothetical protein complement(3528932..3529555) Psychromonas ingrahamii 37 4625876 YP_944157.1 CDS Ping_2852 NC_008709.1 3529983 3531662 R PFAM: ABC-1 domain protein; KEGG: pol:Bpro_5555 ABC-1; ubiquinone biosynthesis protein complement(3529983..3531662) Psychromonas ingrahamii 37 4625877 YP_944158.1 CDS Ping_2853 NC_008709.1 3531671 3532351 R KEGG: pol:Bpro_5554 hypothetical protein; hypothetical protein complement(3531671..3532351) Psychromonas ingrahamii 37 4625878 YP_944159.1 CDS Ping_2854 NC_008709.1 3533000 3533329 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: vfi:VF1342 phosphoribosylaminoimidazole carboxylase ATPase subunit; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(3533000..3533329) Psychromonas ingrahamii 37 4625879 YP_944160.1 CDS Ping_2855 NC_008709.1 3533691 3534164 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO4640 antioxidant, AhpC/Tsa family; AhpC/Tsa family antioxidant complement(3533691..3534164) Psychromonas ingrahamii 37 4625880 YP_944161.1 CDS Ping_2856 NC_008709.1 3534742 3536334 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 3534742..3536334 Psychromonas ingrahamii 37 4625881 YP_944162.1 CDS Ping_2857 NC_008709.1 3536630 3537232 D KEGG: cps:CPS_2164 hypothetical protein; hypothetical protein 3536630..3537232 Psychromonas ingrahamii 37 4625882 YP_944163.1 CDS rpmE NC_008709.1 3538039 3538251 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(3538039..3538251) Psychromonas ingrahamii 37 4625640 YP_944164.1 CDS Ping_2860 NC_008709.1 3538927 3540288 R KEGG: vpa:VPA0294 hypothetical protein; hypothetical protein complement(3538927..3540288) Psychromonas ingrahamii 37 4625642 YP_944165.1 CDS Ping_2861 NC_008709.1 3540754 3542007 D TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: plu:plu0519 unnamed protein product; similar to hypothetical transport protein, NupC family protein, YeiM of Escherichia coli; nucleoside transporter 3540754..3542007 Psychromonas ingrahamii 37 4625643 YP_944166.1 CDS Ping_2862 NC_008709.1 3542112 3542885 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3542112..3542885 Psychromonas ingrahamii 37 4625644 YP_944167.1 CDS Ping_2863 NC_008709.1 3542885 3544132 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 3542885..3544132 Psychromonas ingrahamii 37 4625645 YP_944168.1 CDS Ping_2864 NC_008709.1 3544221 3544931 D TIGRFAM: purine nucleoside phosphorylase; PFAM: purine and other phosphorylases, family 1; KEGG: son:SO1221 purine nucleoside phosphorylase; purine nucleoside phosphorylase 3544221..3544931 Psychromonas ingrahamii 37 4625646 YP_944169.1 CDS Ping_2865 NC_008709.1 3545220 3546560 D KEGG: vfi:VF0505 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; PFAM: glycosyl transferase, family 3; Pyrimidine nucleoside phosphorylase, C-terminal domain; thymidine phosphorylase 3545220..3546560 Psychromonas ingrahamii 37 4625647 YP_944170.1 CDS Ping_2866 NC_008709.1 3546648 3547271 D KEGG: ppr:PBPRA0653 hypothetical protein; hypothetical protein 3546648..3547271 Psychromonas ingrahamii 37 4625648 YP_944171.1 CDS Ping_2867 NC_008709.1 3547276 3547683 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mhy:mhp225 cytidine deaminase; zinc-binding CMP/dCMP deaminase 3547276..3547683 Psychromonas ingrahamii 37 4625649 YP_944172.1 CDS Ping_2868 NC_008709.1 3547721 3548479 D catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 3547721..3548479 Psychromonas ingrahamii 37 4625650 YP_944173.1 CDS Ping_2869 NC_008709.1 3549101 3551362 D KEGG: vch:VC2678 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; primosomal protein N' 3549101..3551362 Psychromonas ingrahamii 37 4625651 YP_944174.1 CDS Ping_2870 NC_008709.1 3551474 3551887 R PFAM: Stringent starvation protein B; KEGG: vfi:VF2215 stringent starvation protein B; stringent starvation protein B complement(3551474..3551887) Psychromonas ingrahamii 37 4625652 YP_944175.1 CDS Ping_2871 NC_008709.1 3551887 3552522 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: eca:ECA0308 stringent starvation protein A; stringent starvation protein A complement(3551887..3552522) Psychromonas ingrahamii 37 4625653 YP_944176.1 CDS Ping_2872 NC_008709.1 3552631 3553362 R PFAM: cytochrome c1; KEGG: vfi:VF2217 cytochrome C1; ubiquinol--cytochrome c reductase, cytochrome c1 complement(3552631..3553362) Psychromonas ingrahamii 37 4625654 YP_944177.1 CDS Ping_2873 NC_008709.1 3553359 3554639 R PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: cps:CPS_4439 ubiquinol-cytochrome c reductase, cytochrome b; bifunctional ubiquinol-cytochrome c reductase/cytochrome b/b6 complement(3553359..3554639) Psychromonas ingrahamii 37 4625655 YP_944178.1 CDS petA NC_008709.1 3554639 3555229 R TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: son:SO0608 ubiquinol-cytochrome c reductase iron-sulfur subunit; ubiquinol-cytochrome c reductase iron-sulfur subunit PetA complement(3554639..3555229) Psychromonas ingrahamii 37 4625656 YP_944179.1 CDS Ping_2876 NC_008709.1 3556110 3556499 R PFAM: ribosomal protein S9; KEGG: sgl:SG0217 30S ribosomal protein S9; 30S ribosomal protein S9 complement(3556110..3556499) Psychromonas ingrahamii 37 4625658 YP_944180.1 CDS rplM NC_008709.1 3556513 3556941 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3556513..3556941) Psychromonas ingrahamii 37 4626213 YP_944181.1 CDS Ping_2878 NC_008709.1 3557215 3558333 R PFAM: AFG1-family ATPase; KEGG: vfi:VF2223 ATPase; AFG1 family ATPase complement(3557215..3558333) Psychromonas ingrahamii 37 4626214 YP_944182.1 CDS Ping_2879 NC_008709.1 3559045 3560454 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3559045..3560454 Psychromonas ingrahamii 37 4626215 YP_944183.1 CDS Ping_2880 NC_008709.1 3560859 3561965 D TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: vvu:VV10604 protease DegS; periplasmic serine protease DegS 3560859..3561965 Psychromonas ingrahamii 37 4626216 YP_944184.1 CDS Ping_2881 NC_008709.1 3562049 3563308 R TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: vfi:VF0401 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3562049..3563308) Psychromonas ingrahamii 37 4626217 YP_944185.1 CDS Ping_2882 NC_008709.1 3563328 3563576 R PFAM: BolA family protein; KEGG: ppr:PBPRA3243 putative BolA/YrbA family protein, transcriptional regulator; BolA family protein complement(3563328..3563576) Psychromonas ingrahamii 37 4626218 YP_944186.1 CDS Ping_2883 NC_008709.1 3563603 3563866 R hypothetical protein complement(3563603..3563866) Psychromonas ingrahamii 37 4626219 YP_944187.1 CDS Ping_2884 NC_008709.1 3563863 3564477 R PFAM: toluene tolerance family protein; KEGG: son:SO3951 hypothetical protein; ABC-type transporter periplasmic protein complement(3563863..3564477) Psychromonas ingrahamii 37 4626220 YP_944188.1 CDS Ping_2885 NC_008709.1 3564477 3564959 R PFAM: Mammalian cell entry related domain protein; KEGG: vvy:VV0457 ABC-type transport system, periplasmic component; hypothetical protein complement(3564477..3564959) Psychromonas ingrahamii 37 4626221 YP_944189.1 CDS Ping_2886 NC_008709.1 3565151 3565855 R PFAM: protein of unknown function DUF140; KEGG: ilo:IL0404 ABC-type transport system involved in resistance to organic solvents, permease component; ABC-type transporter inner membrane protein complement(3565151..3565855) Psychromonas ingrahamii 37 4626222 YP_944190.1 CDS Ping_2887 NC_008709.1 3565927 3566736 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pha:PSHAa2544 transport protein (ABC superfamily, atp-binding); ABC transporter ATP-binding protein complement(3565927..3566736) Psychromonas ingrahamii 37 4626223 YP_944191.1 CDS Ping_2888 NC_008709.1 3567327 3567875 D TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: vch:VC2524 putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3567327..3567875 Psychromonas ingrahamii 37 4626224 YP_944192.1 CDS Ping_2889 NC_008709.1 3567876 3568439 D PFAM: protein of unknown function DUF1239; KEGG: ilo:IL0399 hypothetical protein; hypothetical protein 3567876..3568439 Psychromonas ingrahamii 37 4626225 YP_944193.1 CDS Ping_2890 NC_008709.1 3568426 3568947 D PFAM: OstA family protein; KEGG: sdy:SDY_3381 hypothetical protein; OstA family protein 3568426..3568947 Psychromonas ingrahamii 37 4626226 YP_944194.1 CDS Ping_2891 NC_008709.1 3568950 3569675 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3960 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 3568950..3569675 Psychromonas ingrahamii 37 4626227 YP_944195.1 CDS Ping_2892 NC_008709.1 3569777 3571231 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: ppr:PBPRA3255 putative sigma factor N RpoN; RNA polymerase sigma-54 subunit RpoN 3569777..3571231 Psychromonas ingrahamii 37 4626228 YP_944196.1 CDS Ping_2893 NC_008709.1 3571264 3571770 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: vfi:VF0385 nitrogen regulatory IIA protein; putative PTS IIA-like nitrogen-regulatory protein PtsN 3571264..3571770 Psychromonas ingrahamii 37 4626229 YP_944197.1 CDS Ping_2894 NC_008709.1 3572104 3572952 D PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: ppr:PBPRA3258 conserved hypothetical protein; hypothetical protein 3572104..3572952 Psychromonas ingrahamii 37 4626230 YP_944198.1 CDS Ping_2895 NC_008709.1 3573058 3573336 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: vch:VC2533 phosphocarrier protein NPr; phosphocarrier protein NPr of HPr family protein 3573058..3573336 Psychromonas ingrahamii 37 4625667 YP_944199.1 CDS Ping_2896 NC_008709.1 3573351 3574712 D TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: ppr:PBPRA3260 putative magnesium transporter; magnesium transporter 3573351..3574712 Psychromonas ingrahamii 37 4625668 YP_944200.1 CDS Ping_2897 NC_008709.1 3574897 3575268 R PFAM: Uncharacterised conserved protein UCP006287; KEGG: sdn:Sden_2907 uncharacterised conserved protein UCP006287; hypothetical protein complement(3574897..3575268) Psychromonas ingrahamii 37 4625197 YP_944201.1 CDS Ping_2898 NC_008709.1 3575820 3576668 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: vpa:VPA1348 putative transcriptional activator ToxR; cholera toxin transcriptional activator-like protein complement(3575820..3576668) Psychromonas ingrahamii 37 4625198 YP_944202.1 CDS Ping_2899 NC_008709.1 3576977 3579577 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(3576977..3579577) Psychromonas ingrahamii 37 4625199 YP_944203.1 CDS Ping_2900 NC_008709.1 3580185 3581036 R PFAM: peptidase M48, Ste24p; HtpX domain protein; KEGG: ilo:IL1320 Zn-dependent protease with chaperone function; peptidase M48, Ste24p complement(3580185..3581036) Psychromonas ingrahamii 37 4625200 YP_944204.1 CDS Ping_2901 NC_008709.1 3581812 3582489 D TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ilo:IL1575 L-2-haloalkanoic acid dehalogenase, HAD superfamily; L-2-haloalkanoic acid dehalogenase, HAD superfamily protein 3581812..3582489 Psychromonas ingrahamii 37 4625201 YP_944205.1 CDS Ping_2902 NC_008709.1 3582771 3583628 D YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 3582771..3583628 Psychromonas ingrahamii 37 4625202 YP_944206.1 CDS Ping_2903 NC_008709.1 3583753 3584343 R PFAM: regulatory protein, TetR; KEGG: vfi:VF1081 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3583753..3584343) Psychromonas ingrahamii 37 4625203 YP_944207.1 CDS Ping_2904 NC_008709.1 3584880 3585302 R PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: sde:Sde_0707 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(3584880..3585302) Psychromonas ingrahamii 37 4625204 YP_944208.1 CDS Ping_2905 NC_008709.1 3586192 3587382 R PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bca:BCE1571 flavohemoprotein; bifunctional nitric oxide dioxygenase/dihydropteridine reductase complement(3586192..3587382) Psychromonas ingrahamii 37 4625205 YP_944209.1 CDS Ping_2906 NC_008709.1 3587659 3588042 R PFAM: protein of unknown function DUF302; KEGG: tcx:Tcr_2069 protein of unknown function DUF302; hypothetical protein complement(3587659..3588042) Psychromonas ingrahamii 37 4625206 YP_944210.1 CDS Ping_2907 NC_008709.1 3588410 3588976 R KEGG: sru:SRU_1982 hypothetical protein; hypothetical protein complement(3588410..3588976) Psychromonas ingrahamii 37 4625207 YP_944211.1 CDS Ping_2908 NC_008709.1 3589223 3590911 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: btk:BT9727_3756 oligo-1,6-glucosidase; trehalose-6-phosphate hydrolase complement(3589223..3590911) Psychromonas ingrahamii 37 4625208 YP_944212.1 CDS Ping_2909 NC_008709.1 3590971 3592068 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: hch:HCH_04796 transcriptional regulator; LacI family transcriptional regulator complement(3590971..3592068) Psychromonas ingrahamii 37 4625209 YP_944213.1 CDS Ping_2910 NC_008709.1 3592272 3593630 D PFAM: extracellular solute-binding protein, family 1; KEGG: sit:TM1040_3307 extracellular solute-binding protein, family 1; ABC alpha-glucoside transporter extracellular solute-binding protein 3592272..3593630 Psychromonas ingrahamii 37 4625210 YP_944214.1 CDS Ping_2911 NC_008709.1 3593700 3594710 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03062 alpha-glucosides transport system permease ABC transporter protein; ABC alpha-glucoside transporter inner membrane binding protein 3593700..3594710 Psychromonas ingrahamii 37 4625211 YP_944215.1 CDS Ping_2912 NC_008709.1 3594752 3595900 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03063 alpha-glucosides transport system permease ABC transporter protein; ABC transporter binding protein inner membrane protein 3594752..3595900 Psychromonas ingrahamii 37 4624435 YP_944216.1 CDS Ping_2913 NC_008709.1 3595921 3597021 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc03065 alpha-glucosides transport ATP-binding ABC transporter protein; sugar/spermidine/putrescine/iron/thiamine ABC transporter ATP-binding protein 3595921..3597021 Psychromonas ingrahamii 37 4624436 YP_944217.1 CDS Ping_2914 NC_008709.1 3597320 3597895 R KEGG: ftf:FTF0660 hypothetical membrane protein; hypothetical protein complement(3597320..3597895) Psychromonas ingrahamii 37 4624437 YP_944218.1 CDS Ping_2916 NC_008709.1 3598971 3599771 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vpa:VPA0878 hypothetical protein; diguanylate cyclase 3598971..3599771 Psychromonas ingrahamii 37 4624439 YP_944219.1 CDS Ping_2917 NC_008709.1 3599928 3600131 R KEGG: abo:ABO_1656 hypothetical protein; hypothetical protein complement(3599928..3600131) Psychromonas ingrahamii 37 4624440 YP_944220.1 CDS Ping_2918 NC_008709.1 3600260 3600895 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ecp:ECP_1745 probable transporter transmembrane protein YeaS; leucine export protein LeuE complement(3600260..3600895) Psychromonas ingrahamii 37 4624441 YP_944221.1 CDS Ping_2920 NC_008709.1 3602371 3603513 D KEGG: vvy:VVA1223 hypothetical protein; hypothetical protein 3602371..3603513 Psychromonas ingrahamii 37 4624443 YP_944222.1 CDS Ping_2921 NC_008709.1 3604345 3604521 R KEGG: ecp:ECP_2332 hypothetical protein YfbT (putative hydrolase); hypothetical protein complement(3604345..3604521) Psychromonas ingrahamii 37 4624444 YP_944223.1 CDS Ping_2922 NC_008709.1 3604669 3605109 R KEGG: mhu:Mhun_1719 hypothetical protein; hypothetical protein complement(3604669..3605109) Psychromonas ingrahamii 37 4624445 YP_944224.1 CDS Ping_2923 NC_008709.1 3605317 3605661 R KEGG: eca:ECA2760 hypothetical protein; hypothetical protein complement(3605317..3605661) Psychromonas ingrahamii 37 4624446 YP_944225.1 CDS Ping_2924 NC_008709.1 3606163 3606486 R hypothetical protein complement(3606163..3606486) Psychromonas ingrahamii 37 4624447 YP_944226.1 CDS Ping_2925 NC_008709.1 3607061 3608485 R E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(3607061..3608485) Psychromonas ingrahamii 37 4624448 YP_944227.1 CDS SucB NC_008709.1 3608602 3610233 R KEGG: vvy:VV2772 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component complement(3608602..3610233) Psychromonas ingrahamii 37 4624449 YP_944228.1 CDS aceE NC_008709.1 3610291 3612951 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(3610291..3612951) Psychromonas ingrahamii 37 4624450 YP_944229.1 CDS Ping_2928 NC_008709.1 3613116 3613865 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: eca:ECA3790 pyruvate dehydrogenase complex repressor; transcriptional regulator complement(3613116..3613865) Psychromonas ingrahamii 37 4624451 YP_944230.1 CDS Ping_2929 NC_008709.1 3614222 3615232 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yps:YPTB3798 gluconate utilization system Gnt-I transcriptional repressor; LacI family transcriptional regulator 3614222..3615232 Psychromonas ingrahamii 37 4624452 YP_944231.1 CDS Ping_2930 NC_008709.1 3615318 3615965 R KEGG: vfi:VF0090 2-dehydro-3-deoxyphosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(3615318..3615965) Psychromonas ingrahamii 37 4623638 YP_944232.1 CDS Ping_2931 NC_008709.1 3616228 3616542 R KEGG: vvy:VV0059 phosphogluconate dehydratase; hypothetical protein complement(3616228..3616542) Psychromonas ingrahamii 37 4623639 YP_944233.1 CDS Ping_2932 NC_008709.1 3616579 3617103 R KEGG: pha:PSHAb0480 putative D-gluconate kinase active at low temperature (idonate catabolism); TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase protein complement(3616579..3617103) Psychromonas ingrahamii 37 4623640 YP_944234.1 CDS Ping_2933 NC_008709.1 3617521 3618537 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hch:HCH_03539 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; TRAP dicarboxylate transporter subunit DctP 3617521..3618537 Psychromonas ingrahamii 37 4623641 YP_944235.1 CDS Ping_2934 NC_008709.1 3618599 3619162 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: hch:HCH_03541 TRAP-type mannitol/chloroaromatic compound transport system, small permease component; tripartite ATP-independent periplasmic transporter DctQ 3618599..3619162 Psychromonas ingrahamii 37 4623642 YP_944236.1 CDS Ping_2935 NC_008709.1 3619155 3620477 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: hch:HCH_03542 TRAP-type mannitol/chloroaromatic compound transport system, large permease component; TRAP dicarboxylate transporter subunit DctM 3619155..3620477 Psychromonas ingrahamii 37 4623643 YP_944237.1 CDS Ping_2936 NC_008709.1 3620477 3621010 D KEGG: hch:HCH_03543 gluconate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase protein 3620477..3621010 Psychromonas ingrahamii 37 4623644 YP_944238.1 CDS Ping_2937 NC_008709.1 3621045 3622547 D KEGG: son:SO1902 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 3621045..3622547 Psychromonas ingrahamii 37 4623645 YP_944239.1 CDS Ping_2938 NC_008709.1 3622659 3623477 R PFAM: protein of unknown function DUF81; KEGG: pha:PSHAa1469 hypothetical protein; hypothetical protein complement(3622659..3623477) Psychromonas ingrahamii 37 4623646 YP_944240.1 CDS Ping_2939 NC_008709.1 3623599 3624834 R PFAM: Amidase; KEGG: pat:Patl_2055 amidase; amidase complement(3623599..3624834) Psychromonas ingrahamii 37 4623647 YP_944241.1 CDS Ping_2940 NC_008709.1 3625393 3625938 R PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: ilo:IL0455 N-acetyl-anhydromuramyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase complement(3625393..3625938) Psychromonas ingrahamii 37 4623648 YP_944242.1 CDS Ping_2941 NC_008709.1 3626355 3626777 R KEGG: mlo:mlr4684 hypothetical protein; hypothetical protein complement(3626355..3626777) Psychromonas ingrahamii 37 4623649 YP_944243.1 CDS Ping_2942 NC_008709.1 3626840 3627541 R hypothetical protein complement(3626840..3627541) Psychromonas ingrahamii 37 4623650 YP_944244.1 CDS Ping_2943 NC_008709.1 3627571 3628473 R hypothetical protein complement(3627571..3628473) Psychromonas ingrahamii 37 4623651 YP_944245.1 CDS Ping_2944 NC_008709.1 3628460 3629671 R PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: ana:alr4060 probable alginate O-acetylation protein; membrane bound O-acyl transferase, MBOAT family protein complement(3628460..3629671) Psychromonas ingrahamii 37 4623652 YP_944246.1 CDS Ping_2945 NC_008709.1 3630560 3630814 R hypothetical protein complement(3630560..3630814) Psychromonas ingrahamii 37 4623653 YP_944247.1 CDS Ping_2946 NC_008709.1 3631566 3632138 D PFAM: phage integrase family protein; KEGG: mag:amb3688 integrase; phage integrase family protein 3631566..3632138 Psychromonas ingrahamii 37 4623654 YP_944248.1 CDS Ping_2947 NC_008709.1 3632131 3632796 R hypothetical protein complement(3632131..3632796) Psychromonas ingrahamii 37 4623655 YP_944249.1 CDS Ping_2948 NC_008709.1 3632806 3633948 R PFAM: phage integrase family protein; KEGG: mag:amb2127 integrase; phage integrase family protein complement(3632806..3633948) Psychromonas ingrahamii 37 4623656 YP_944250.1 CDS guaA NC_008709.1 3634203 3635783 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3634203..3635783) Psychromonas ingrahamii 37 4623465 YP_944251.1 CDS Ping_2950 NC_008709.1 3635920 3637386 R KEGG: son:SO3293 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(3635920..3637386) Psychromonas ingrahamii 37 4623466 YP_944252.1 CDS Ping_2951 NC_008709.1 3637580 3638923 D KEGG: vch:VC0766 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; nucleic acid binding, OB-fold, tRNA/helicase-type; exodeoxyribonuclease VII large subunit 3637580..3638923 Psychromonas ingrahamii 37 4623467 YP_944253.1 CDS proA NC_008709.1 3639030 3640277 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3639030..3640277) Psychromonas ingrahamii 37 4623468 YP_944254.1 CDS Ping_2953 NC_008709.1 3640310 3641446 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3640310..3641446) Psychromonas ingrahamii 37 4623469 YP_944255.1 CDS crl NC_008709.1 3641556 3641948 R involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl complement(3641556..3641948) Psychromonas ingrahamii 37 4623470 YP_944256.1 CDS frsA NC_008709.1 3641991 3643250 R forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein complement(3641991..3643250) Psychromonas ingrahamii 37 4623471 YP_944257.1 CDS Ping_2956 NC_008709.1 3643447 3645411 R PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pha:PSHAa2010 glutathione-regulated potassium-efflux system protein KefB; sodium/hydrogen exchanger complement(3643447..3645411) Psychromonas ingrahamii 37 4623472 YP_944258.1 CDS Ping_2957 NC_008709.1 3645689 3648121 R PFAM: protein of unknown function DUF214; KEGG: vfi:VFA1042 ABC transporter component, lysophospholipase L1 transport; hypothetical protein complement(3645689..3648121) Psychromonas ingrahamii 37 4623473 YP_944259.1 CDS Ping_2958 NC_008709.1 3648122 3648796 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VFA1043 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(3648122..3648796) Psychromonas ingrahamii 37 4623474 YP_944260.1 CDS Ping_2959 NC_008709.1 3648795 3649403 D PFAM: lipolytic enzyme, G-D-S-L family; KEGG: vfi:VFA1044 acyl-CoA thioesterase I; arylesterase 3648795..3649403 Psychromonas ingrahamii 37 4623475 YP_944261.1 CDS Ping_2960 NC_008709.1 3649465 3650847 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: plu:plu0689 putative cell cycle protein MesJ; tRNA(Ile)-lysidine synthetase complement(3649465..3650847) Psychromonas ingrahamii 37 4623476 YP_944262.1 CDS Ping_2961 NC_008709.1 3650873 3654394 R KEGG: vpa:VP2303 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(3650873..3654394) Psychromonas ingrahamii 37 4623477 YP_944263.1 CDS Ping_2962 NC_008709.1 3654504 3655118 R PFAM: ribonuclease HII/HIII; KEGG: vpa:VP2304 ribonuclease HII; ribonuclease H complement(3654504..3655118) Psychromonas ingrahamii 37 4623478 YP_944264.1 CDS Ping_2963 NC_008709.1 3655140 3656285 R KEGG: vvy:VV2544 lipid A disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase, family 19; lipid-A-disaccharide synthase complement(3655140..3656285) Psychromonas ingrahamii 37 4623479 YP_944265.1 CDS Ping_2964 NC_008709.1 3656357 3657145 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(3656357..3657145) Psychromonas ingrahamii 37 4623480 YP_944266.1 CDS Ping_2965 NC_008709.1 3657145 3657597 R TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: vfi:VF1951 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; (3R)-hydroxymyristoyl-ACP dehydratase complement(3657145..3657597) Psychromonas ingrahamii 37 4623481 YP_944267.1 CDS Ping_2966 NC_008709.1 3657611 3658633 R TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; KEGG: ppr:PBPRA2958 putative UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(3657611..3658633) Psychromonas ingrahamii 37 4624770 YP_944268.1 CDS Ping_2967 NC_008709.1 3658644 3659156 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: vfi:VF1953 outer membrane protein OmpH; outer membrane chaperone Skp complement(3658644..3659156) Psychromonas ingrahamii 37 4624771 YP_944269.1 CDS Ping_2968 NC_008709.1 3659241 3661649 R PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: son:SO1637 bacterial surface antigen; surface antigen (D15) complement(3659241..3661649) Psychromonas ingrahamii 37 4624772 YP_944270.1 CDS Ping_2969 NC_008709.1 3661853 3663229 R TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: sdn:Sden_1561 peptidase M50, putative membrane-associated zinc metallopeptidase; putative membrane-associated zinc metalloprotease complement(3661853..3663229) Psychromonas ingrahamii 37 4624773 YP_944271.1 CDS Ping_2970 NC_008709.1 3663361 3664560 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(3663361..3664560) Psychromonas ingrahamii 37 4624774 YP_944272.1 CDS Ping_2971 NC_008709.1 3664564 3665415 R PFAM: phosphatidate cytidylyltransferase; KEGG: ppr:PBPRA2963 putative phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(3664564..3665415) Psychromonas ingrahamii 37 4624775 YP_944273.1 CDS Ping_2972 NC_008709.1 3665468 3666247 R KEGG: cps:CPS_1557 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(3665468..3666247) Psychromonas ingrahamii 37 4624776 YP_944274.1 CDS Ping_2973 NC_008709.1 3666280 3666837 R PFAM: ribosome recycling factor; KEGG: vpa:VP2315 ribosome recycling factor; ribosome recycling factor complement(3666280..3666837) Psychromonas ingrahamii 37 4624777 YP_944275.1 CDS Ping_2974 NC_008709.1 3666870 3667619 R TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pat:Patl_1251 uridylate kinase; uridylate kinase complement(3666870..3667619) Psychromonas ingrahamii 37 4624778 YP_944276.1 CDS Ping_2975 NC_008709.1 3667808 3668686 R TIGRFAM: translation elongation factor Ts; PFAM: ubiquitin-associated- domain-containing protein; elongation factor Ts; KEGG: pat:Patl_1250 translation elongation factor Ts; translation elongation factor Ts complement(3667808..3668686) Psychromonas ingrahamii 37 4624779 YP_944277.1 CDS Ping_2976 NC_008709.1 3668787 3669521 R PFAM: ribosomal protein S2; KEGG: son:SO1629 30S ribosomal protein S2; 30S ribosomal protein S2 complement(3668787..3669521) Psychromonas ingrahamii 37 4624780 YP_944278.1 CDS Ping_2977 NC_008709.1 3670401 3671450 R KEGG: pen:PSEEN5223 hypothetical protein; hypothetical protein complement(3670401..3671450) Psychromonas ingrahamii 37 4624781 YP_944279.1 CDS Ping_2978 NC_008709.1 3671447 3672487 R hypothetical protein complement(3671447..3672487) Psychromonas ingrahamii 37 4624782 YP_944280.1 CDS Ping_2979 NC_008709.1 3673313 3673720 R hypothetical protein complement(3673313..3673720) Psychromonas ingrahamii 37 4624783 YP_944281.1 CDS Ping_2980 NC_008709.1 3674047 3674643 R hypothetical protein complement(3674047..3674643) Psychromonas ingrahamii 37 4624784 YP_944282.1 CDS Ping_2981 NC_008709.1 3675154 3675606 R KEGG: ppr:PBPRA1759 hypothetical protein; hypothetical protein complement(3675154..3675606) Psychromonas ingrahamii 37 4624785 YP_944283.1 CDS Ping_2982 NC_008709.1 3676365 3677051 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: yps:YPTB0011 GntR-famly transcriptional regulator; transcriptional regulator 3676365..3677051 Psychromonas ingrahamii 37 4624786 YP_944284.1 CDS Ping_2983 NC_008709.1 3677663 3678025 R hypothetical protein complement(3677663..3678025) Psychromonas ingrahamii 37 4624787 YP_944285.1 CDS Ping_2984 NC_008709.1 3679102 3679989 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sde:Sde_2977 response regulator receiver domain protein (CheY-like); two component LuxR family transcriptional reguator protein complement(3679102..3679989) Psychromonas ingrahamii 37 4624788 YP_944286.1 CDS Ping_2985 NC_008709.1 3679979 3683344 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: abo:ABO_1986 two-component sensor histidine kinase protein, putative; bifunctional histidine kinase sensor/response regulator complement(3679979..3683344) Psychromonas ingrahamii 37 4623676 YP_944287.1 CDS Ping_2986 NC_008709.1 3683779 3685056 D KEGG: hch:HCH_04519 ABC-type branched-chain amino acid transport system, periplasmic component; ABC transporter for branched chain amino acids substrate binding protein 3683779..3685056 Psychromonas ingrahamii 37 4623677 YP_944288.1 CDS Ping_2987 NC_008709.1 3685152 3686795 D PFAM: inner-membrane translocator; KEGG: abo:ABO_2510 branched-chain amino acid ABC transporter, permease protein; ABC transporter inner-membrane translocator 3685152..3686795 Psychromonas ingrahamii 37 4623678 YP_944289.1 CDS Ping_2988 NC_008709.1 3686795 3687967 D PFAM: inner-membrane translocator; KEGG: abo:ABO_2511 branched-chain amino acid ABC transporter, permease protein; ABC transporter inner-membrane translocator 3686795..3687967 Psychromonas ingrahamii 37 4623679 YP_944290.1 CDS Ping_2989 NC_008709.1 3687964 3688779 D PFAM: ABC transporter related; KEGG: psb:Psyr_4429 ABC transporter; ABC transporter ATP-binding protein 3687964..3688779 Psychromonas ingrahamii 37 4623680 YP_944291.1 CDS Ping_2990 NC_008709.1 3688776 3689471 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abo:ABO_2513 amino acid ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 3688776..3689471 Psychromonas ingrahamii 37 4623681 YP_944292.1 CDS Ping_2991 NC_008709.1 3689518 3690459 D PFAM: Urease accessory protein UreD; KEGG: dar:Daro_1430 urease accessory protein UreD; urease accessory protein UreD 3689518..3690459 Psychromonas ingrahamii 37 4623682 YP_944293.1 CDS ureA NC_008709.1 3690498 3690800 D UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3690498..3690800 Psychromonas ingrahamii 37 4623683 YP_944294.1 CDS Ping_2993 NC_008709.1 3690942 3691247 D KEGG: pen:PSEEN2095 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit; urease subunit beta 3690942..3691247 Psychromonas ingrahamii 37 4623684 YP_944295.1 CDS ureC NC_008709.1 3691249 3692952 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3691249..3692952 Psychromonas ingrahamii 37 4623685 YP_944296.1 CDS Ping_2995 NC_008709.1 3693147 3693605 D involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 3693147..3693605 Psychromonas ingrahamii 37 4623686 YP_944297.1 CDS Ping_2996 NC_008709.1 3693595 3694293 D PFAM: Urease accessory protein UreF; KEGG: aeh:Mlg_0186 urease accessory protein UreF; urease accessory protein UreF 3693595..3694293 Psychromonas ingrahamii 37 4623687 YP_944298.1 CDS Ping_2997 NC_008709.1 3694338 3694949 D TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: hch:HCH_04526 urease accessory protein UreG; urease accessory protein UreG 3694338..3694949 Psychromonas ingrahamii 37 4623688 YP_944299.1 CDS Ping_2998 NC_008709.1 3695345 3695773 D PFAM: transposase IS200-family protein; KEGG: ppr:PBPRB1247 hypothetical transposase; transposase IS200-family protein 3695345..3695773 Psychromonas ingrahamii 37 4623689 YP_944300.1 CDS Ping_2999 NC_008709.1 3696430 3696750 R KEGG: cvi:CV1389 hypothetical protein; hypothetical protein complement(3696430..3696750) Psychromonas ingrahamii 37 4623690 YP_944301.1 CDS Ping_3000 NC_008709.1 3696762 3697226 R KEGG: cvi:CV1388 hypothetical protein; hypothetical protein complement(3696762..3697226) Psychromonas ingrahamii 37 4623691 YP_944302.1 CDS Ping_3001 NC_008709.1 3697785 3699047 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: rfr:Rfer_0627 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3697785..3699047 Psychromonas ingrahamii 37 4623692 YP_944303.1 CDS Ping_3002 NC_008709.1 3699704 3700522 R catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3699704..3700522) Psychromonas ingrahamii 37 4623693 YP_944304.1 CDS Ping_3003 NC_008709.1 3701051 3701839 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pha:PSHAa2037 methionine aminopeptidase; contains a divalent metal, usually cobalt; methionine aminopeptidase 3701051..3701839 Psychromonas ingrahamii 37 4623694 YP_944305.1 CDS Ping_3004 NC_008709.1 3702109 3704718 D KEGG: ppr:PBPRA2970 putative protein-P-II uridylyltransferase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; DNA polymerase, beta domain protein region; metal-dependent phosphohydrolase, HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase, HD region; UTP-GlnB uridylyltransferase, GlnD 3702109..3704718 Psychromonas ingrahamii 37 4623788 YP_944306.1 CDS Ping_3005 NC_008709.1 3704849 3705901 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0742 iron(III) ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein complement(3704849..3705901) Psychromonas ingrahamii 37 4623789 YP_944307.1 CDS Ping_3006 NC_008709.1 3705901 3707532 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2150 iron(III)-transport system permease protein SfuB; iron(III) ABC transporter inner membrane binding component complement(3705901..3707532) Psychromonas ingrahamii 37 4623790 YP_944308.1 CDS Ping_3007 NC_008709.1 3707522 3708541 R KEGG: vfi:VF2151 iron(III)-binding protein; ABC iron(III) transporter periplasmic binding protein complement(3707522..3708541) Psychromonas ingrahamii 37 4623791 YP_944309.1 CDS Ping_3008 NC_008709.1 3708724 3709410 R PFAM: MaoC domain protein dehydratase; KEGG: ppr:PBPRB0808 hypothetical acyl dehydratase; dehydratase complement(3708724..3709410) Psychromonas ingrahamii 37 4623792 YP_944310.1 CDS Ping_3009 NC_008709.1 3709462 3710166 R KEGG: pha:PSHAa1429 orotidine-5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(3709462..3710166) Psychromonas ingrahamii 37 4623793 YP_944311.1 CDS Ping_3010 NC_008709.1 3710269 3711441 R KEGG: vch:VC1912 hypothetical protein; hypothetical protein complement(3710269..3711441) Psychromonas ingrahamii 37 4623794 YP_944312.1 CDS Ping_3011 NC_008709.1 3711448 3711735 R PFAM: protein of unknown function DUF1049; KEGG: pmu:PM0799 hypothetical HI1222; hypothetical protein complement(3711448..3711735) Psychromonas ingrahamii 37 4623795 YP_944313.1 CDS Ping_3012 NC_008709.1 3711968 3712255 R TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: ppr:PBPRA2449 putative integration host factor, beta subunit; integration host factor subunit beta complement(3711968..3712255) Psychromonas ingrahamii 37 4623796 YP_944314.1 CDS rpsA NC_008709.1 3712394 3714064 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3712394..3714064) Psychromonas ingrahamii 37 4623797 YP_944315.1 CDS Ping_3014 NC_008709.1 3714171 3714857 R KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase complement(3714171..3714857) Psychromonas ingrahamii 37 4623798 YP_944316.1 CDS Ping_3015 NC_008709.1 3714957 3715727 R PFAM: VacJ family lipoprotein; KEGG: son:SO3197 vacJ lipoprotein, putative; VacJ family lipoprotein complement(3714957..3715727) Psychromonas ingrahamii 37 4623799 YP_944317.1 CDS Ping_3016 NC_008709.1 3715925 3717211 R KEGG: vfi:VF1816 cytochrome c-type biogenesis protein CcmI; cytochrome c-type biogenesis protein CcmI complement(3715925..3717211) Psychromonas ingrahamii 37 4623800 YP_944318.1 CDS Ping_3017 NC_008709.1 3717208 3717750 R PFAM: cytochrome C biogenesis protein; KEGG: vvy:VV2448 putative cytochrome c-type biogenesis protein; cytochrome C biogenesis protein complement(3717208..3717750) Psychromonas ingrahamii 37 4623801 YP_944319.1 CDS Ping_3018 NC_008709.1 3717754 3718290 R TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: vch:VC2051 thiol:disulfide interchange protein DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE complement(3717754..3718290) Psychromonas ingrahamii 37 4623802 YP_944320.1 CDS Ping_3019 NC_008709.1 3718293 3720254 R TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: ppr:PBPRA0952 putative cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF complement(3718293..3720254) Psychromonas ingrahamii 37 4623803 YP_944321.1 CDS Ping_3020 NC_008709.1 3720275 3720742 R PFAM: CcmE/CycJ protein; KEGG: ppr:PBPRA0951 putative cytochrome c-type biogenesis proteinCcmE; CcmE/CycJ protein complement(3720275..3720742) Psychromonas ingrahamii 37 4623804 YP_944322.1 CDS Ping_3021 NC_008709.1 3720739 3720945 R PFAM: Heme exporter protein D (CcmD); KEGG: vfi:VF1821 heme exporter protein D; Heme exporter protein CcmD complement(3720739..3720945) Psychromonas ingrahamii 37 4623805 YP_944323.1 CDS Ping_3022 NC_008709.1 3720947 3721705 R TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: vfi:VF1822 heme chaperone heme-lyase; heme exporter protein CcmC complement(3720947..3721705) Psychromonas ingrahamii 37 4623806 YP_944324.1 CDS Ping_3023 NC_008709.1 3721776 3722444 R TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: ppr:PBPRA0949 putative heme exporter protein B; heme exporter protein CcmB complement(3721776..3722444) Psychromonas ingrahamii 37 4625109 YP_944325.1 CDS Ping_3024 NC_008709.1 3722437 3723075 R KEGG: vch:VC2057 heme exporter protein A; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA complement(3722437..3723075) Psychromonas ingrahamii 37 4625110 YP_944326.1 CDS Ping_3025 NC_008709.1 3723298 3724518 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ppr:PBPRA3185 putative ammonium transporter; ammonium transporter complement(3723298..3724518) Psychromonas ingrahamii 37 4625111 YP_944327.1 CDS Ping_3026 NC_008709.1 3724552 3724890 R PFAM: nitrogen regulatory protein P-II; KEGG: sdn:Sden_2905 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(3724552..3724890) Psychromonas ingrahamii 37 4625112 YP_944328.1 CDS Ping_3027 NC_008709.1 3725236 3726456 D PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: vpa:VP0719 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 3725236..3726456 Psychromonas ingrahamii 37 4625113 YP_944329.1 CDS Ping_3028 NC_008709.1 3726553 3726822 D PFAM: protein of unknown function DUF493; KEGG: son:SO1163 hypothetical protein; hypothetical protein 3726553..3726822 Psychromonas ingrahamii 37 4625114 YP_944330.1 CDS Ping_3029 NC_008709.1 3726839 3727489 D TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: vpa:VP0717 lipoate-protein ligase B; lipoate-protein ligase B 3726839..3727489 Psychromonas ingrahamii 37 4625115 YP_944331.1 CDS Ping_3030 NC_008709.1 3727482 3728450 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3727482..3728450 Psychromonas ingrahamii 37 4625116 YP_944332.1 CDS Ping_3031 NC_008709.1 3728570 3729580 D PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: pha:PSHAa2700 D-cysteine desulfhydrase, PLP-dependent enzyme; pyridoxal-5'-phosphate-dependent enzyme subunit beta 3728570..3729580 Psychromonas ingrahamii 37 4625117 YP_944333.1 CDS Ping_3032 NC_008709.1 3729827 3730876 D PFAM: methyltransferase small; Methyltransferase type 12; Methyltransferase small, N-terminal domain protein; KEGG: vvy:VV2731 16S RNA G1207 methylase RsmC; rRNA (guanine-N(2)-)-methyltransferase 3729827..3730876 Psychromonas ingrahamii 37 4625118 YP_944334.1 CDS glgC NC_008709.1 3730995 3732224 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 3730995..3732224 Psychromonas ingrahamii 37 4625119 YP_944335.1 CDS glgC NC_008709.1 3732295 3733518 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 3732295..3733518 Psychromonas ingrahamii 37 4625120 YP_944336.1 CDS glgA NC_008709.1 3733714 3735180 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 3733714..3735180 Psychromonas ingrahamii 37 4625121 YP_944337.1 CDS Ping_3036 NC_008709.1 3735448 3736809 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: vch:VC0660 ATP-dependent RNA helicase SrmB; ATP-dependent RNA helicase 3735448..3736809 Psychromonas ingrahamii 37 4625122 YP_944338.1 CDS Ping_3037 NC_008709.1 3736861 3737634 R PFAM: protein of unknown function DUF328; KEGG: vch:VC2355 hypothetical protein; hypothetical protein complement(3736861..3737634) Psychromonas ingrahamii 37 4626050 YP_944339.1 CDS pilU NC_008709.1 3737713 3738828 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pha:PSHAa2602 twitching motility protein PilU (type IV pili); type II secretion system twitching motility protein PilU complement(3737713..3738828) Psychromonas ingrahamii 37 4626051 YP_944340.1 CDS pilT NC_008709.1 3738841 3739875 R KEGG: cps:CPS_3662 twitching motility protein PilT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; type II secretion system twitching motility protein PilT complement(3738841..3739875) Psychromonas ingrahamii 37 4626052 YP_944341.1 CDS Ping_3040 NC_008709.1 3739894 3740592 D PFAM: alanine racemase domain protein; KEGG: vfi:VF0430 conserved hypothetical protein; alanine racemase domain-containing protein 3739894..3740592 Psychromonas ingrahamii 37 4626053 YP_944342.1 CDS Ping_3041 NC_008709.1 3740848 3741672 D KEGG: vpa:VP2617 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 3740848..3741672 Psychromonas ingrahamii 37 4626054 YP_944343.1 CDS Ping_3042 NC_008709.1 3741704 3742246 D PFAM: protein of unknown function YGGT; KEGG: vvu:VV11523 predicted integral membrane protein; hypothetical protein 3741704..3742246 Psychromonas ingrahamii 37 4626055 YP_944344.1 CDS Ping_3043 NC_008709.1 3742246 3742542 D PFAM: protein of unknown function DUF167; KEGG: ppr:PBPRA3146 hypothetical protein; hypothetical protein 3742246..3742542 Psychromonas ingrahamii 37 4626056 YP_944345.1 CDS Ping_3044 NC_008709.1 3742561 3743001 D KEGG: vfi:VF0426 hypothetical protein; hypothetical protein 3742561..3743001 Psychromonas ingrahamii 37 4626057 YP_944346.1 CDS Ping_3045 NC_008709.1 3743034 3743636 D TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: ppr:PBPRA3148 hypothetical Xanthosine triphosphate pyrophosphatase; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 3743034..3743636 Psychromonas ingrahamii 37 4626058 YP_944347.1 CDS Ping_3046 NC_008709.1 3743707 3744849 D KEGG: eci:UTI89_C3344 hypothetical protein YggW; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase 3743707..3744849 Psychromonas ingrahamii 37 4626059 YP_944348.1 CDS Ping_3047 NC_008709.1 3744929 3746800 D TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: vfi:VFA0260 glutathione-regulated potassium-efflux system protein KefC; potassium efflux system protein 3744929..3746800 Psychromonas ingrahamii 37 4626060 YP_944349.1 CDS Ping_3049 NC_008709.1 3748149 3748949 D KEGG: sru:SRU_0809 hypothetical protein; hypothetical protein 3748149..3748949 Psychromonas ingrahamii 37 4626062 YP_944350.1 CDS Ping_3051 NC_008709.1 3749116 3749973 D PFAM: MscS Mechanosensitive ion channel; KEGG: sru:SRU_0808 transporter, small conductance mechanosensitive ion channel (MscS) family; mechanosensitive ion channel protein MscS 3749116..3749973 Psychromonas ingrahamii 37 4626035 YP_944351.1 CDS Ping_3052 NC_008709.1 3750035 3750805 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rba:RB8188 probable glyoxylate-induced protein; xylose isomerase domain-containing protein complement(3750035..3750805) Psychromonas ingrahamii 37 4626063 YP_944352.1 CDS Ping_3053 NC_008709.1 3751135 3751575 R hypothetical protein complement(3751135..3751575) Psychromonas ingrahamii 37 4626064 YP_944353.1 CDS Ping_3054 NC_008709.1 3751632 3751901 R hypothetical protein complement(3751632..3751901) Psychromonas ingrahamii 37 4626065 YP_944354.1 CDS Ping_3055 NC_008709.1 3752077 3752472 D hypothetical protein 3752077..3752472 Psychromonas ingrahamii 37 4626085 YP_944355.1 CDS Ping_3056 NC_008709.1 3753552 3756176 R KEGG: pol:Bpro_5310 hypothetical protein; hypothetical protein complement(3753552..3756176) Psychromonas ingrahamii 37 4626086 YP_944356.1 CDS Ping_3057 NC_008709.1 3756173 3756472 R hypothetical protein complement(3756173..3756472) Psychromonas ingrahamii 37 4626087 YP_944357.1 CDS Ping_3058 NC_008709.1 3756715 3757152 R hypothetical protein complement(3756715..3757152) Psychromonas ingrahamii 37 4626088 YP_944358.1 CDS Ping_3059 NC_008709.1 3757159 3757641 R hypothetical protein complement(3757159..3757641) Psychromonas ingrahamii 37 4626089 YP_944359.1 CDS Ping_3060 NC_008709.1 3757738 3758160 R hypothetical protein complement(3757738..3758160) Psychromonas ingrahamii 37 4626090 YP_944360.1 CDS Ping_3061 NC_008709.1 3758184 3758996 R hypothetical protein complement(3758184..3758996) Psychromonas ingrahamii 37 4626091 YP_944361.1 CDS Ping_3062 NC_008709.1 3759767 3760615 R SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: bcn:Bcen_4235 helix-hairpin-helix DNA-binding, class 1; helix-hairpin-helix DNA-binding protein complement(3759767..3760615) Psychromonas ingrahamii 37 4626092 YP_944362.1 CDS Ping_3063 NC_008709.1 3761291 3762424 R TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: sec:SC1223 Gifsy-1 prophage GlpA; transposase, IS605 OrfB family protein complement(3761291..3762424) Psychromonas ingrahamii 37 4626093 YP_944363.1 CDS Ping_3064 NC_008709.1 3762696 3763403 D KEGG: pen:PSEEN1459 hypothetical protein; hypothetical protein 3762696..3763403 Psychromonas ingrahamii 37 4626094 YP_944364.1 CDS Ping_3065 NC_008709.1 3763437 3763901 D hypothetical protein 3763437..3763901 Psychromonas ingrahamii 37 4626095 YP_944365.1 CDS Ping_3066 NC_008709.1 3763927 3766356 D KEGG: ssn:SSO_3248 outer membrane fimbrial user protein; hypothetical protein 3763927..3766356 Psychromonas ingrahamii 37 4626096 YP_944366.1 CDS Ping_3067 NC_008709.1 3766809 3767348 R KEGG: spo:SPAPB1E7.04c putative glucoamylase I (alpha-1,4-glucan glucosidase), extracellular starch-degrading enzyme; by similarity to S. cerevisiae STA1; contains chitinase family signature; putative glucoamylase I complement(3766809..3767348) Psychromonas ingrahamii 37 4626097 YP_944367.1 CDS Ping_3068 NC_008709.1 3767775 3768071 D hypothetical protein 3767775..3768071 Psychromonas ingrahamii 37 4626098 YP_944368.1 CDS Ping_3070 NC_008709.1 3768928 3770988 R KEGG: aba:Acid345_3295 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX complement(3768928..3770988) Psychromonas ingrahamii 37 4626100 YP_944369.1 CDS Ping_3071 NC_008709.1 3771297 3771632 R PFAM: protein of unknown function DUF167; KEGG: rfr:Rfer_0749 protein of unknown function DUF167; hypothetical protein complement(3771297..3771632) Psychromonas ingrahamii 37 4626101 YP_944370.1 CDS Ping_3072 NC_008709.1 3771936 3772625 R PFAM: phospholipid/glycerol acyltransferase; KEGG: tdn:Tmden_0310 phospholipid/glycerol acyltransferase; 1-acylglycerol-3-phosphate O-acyltransferase complement(3771936..3772625) Psychromonas ingrahamii 37 4626102 YP_944371.1 CDS Ping_3073 NC_008709.1 3773023 3773370 R KEGG: rsp:RSP_4199 putative DnaK suppressor protein; TraR/DksA family transcriptional regulator complement(3773023..3773370) Psychromonas ingrahamii 37 4624012 YP_944372.1 CDS Ping_3074 NC_008709.1 3773813 3774229 R PFAM: globin; KEGG: pha:PSHAa2217 globin-like; globin complement(3773813..3774229) Psychromonas ingrahamii 37 4624013 YP_944373.1 CDS Ping_3075 NC_008709.1 3774546 3774926 R hypothetical protein complement(3774546..3774926) Psychromonas ingrahamii 37 4624014 YP_944374.1 CDS Ping_3076 NC_008709.1 3775410 3776060 R KEGG: stm:STM2726 hypothetical protein; hypothetical protein complement(3775410..3776060) Psychromonas ingrahamii 37 4624015 YP_944375.1 CDS Ping_3077 NC_008709.1 3776573 3777886 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; KEGG: vfi:VFA0056 hypothetical protein; diguanylate cyclase complement(3776573..3777886) Psychromonas ingrahamii 37 4624016 YP_944376.1 CDS Ping_3078 NC_008709.1 3778343 3778651 D hypothetical protein 3778343..3778651 Psychromonas ingrahamii 37 4624017 YP_944377.1 CDS Ping_3079 NC_008709.1 3778907 3779158 R KEGG: pat:Patl_3792 hypothetical protein; hypothetical protein complement(3778907..3779158) Psychromonas ingrahamii 37 4624018 YP_944378.1 CDS Ping_3080 NC_008709.1 3779596 3781431 R KEGG: sru:SRU_0851 hypothetical protein; hypothetical protein complement(3779596..3781431) Psychromonas ingrahamii 37 4624019 YP_944379.1 CDS Ping_3081 NC_008709.1 3782098 3782709 R KEGG: rru:Rru_A2472 hypothetical protein; hypothetical protein complement(3782098..3782709) Psychromonas ingrahamii 37 4624020 YP_944380.1 CDS Ping_3082 NC_008709.1 3782988 3783749 R PFAM: tRNA-hydroxylase; KEGG: vpa:VP1099 tRNA-hydroxylase; tRNA-hydroxylase complement(3782988..3783749) Psychromonas ingrahamii 37 4624021 YP_944381.1 CDS Ping_3083 NC_008709.1 3784556 3785785 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eba:ebA784 hypothetical protein; diguanylate cyclase 3784556..3785785 Psychromonas ingrahamii 37 4624022 YP_944382.1 CDS Ping_3084 NC_008709.1 3786352 3787242 D KEGG: abo:ABO_1996 hypothetical protein; hypothetical protein 3786352..3787242 Psychromonas ingrahamii 37 4624023 YP_944383.1 CDS Ping_3085 NC_008709.1 3787310 3787942 R PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: cps:CPS_4923 oxidoreductase, 2OG-Fe(II) oxygenase family; 2OG-Fe(II) oxygenase complement(3787310..3787942) Psychromonas ingrahamii 37 4624024 YP_944384.1 CDS Ping_3086 NC_008709.1 3788809 3791136 D PFAM: Pyrrolo-quinoline quinone; KEGG: ilo:IL0790 glucose dehydrogenase; glucose dehydrogenase 3788809..3791136 Psychromonas ingrahamii 37 4624025 YP_944385.1 CDS Ping_3087 NC_008709.1 3792043 3793155 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mca:MCA0639 NADH-dependent flavin oxidoreductase, Oye family; NADH:flavin oxidoreductase complement(3792043..3793155) Psychromonas ingrahamii 37 4624026 YP_944386.1 CDS Ping_3088 NC_008709.1 3793223 3793819 R PFAM: regulatory protein, TetR; KEGG: gme:Gmet_0803 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3793223..3793819) Psychromonas ingrahamii 37 4624027 YP_944387.1 CDS Ping_3089 NC_008709.1 3794699 3796882 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: rpb:RPB_0451 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 3794699..3796882 Psychromonas ingrahamii 37 4624028 YP_944388.1 CDS Ping_3090 NC_008709.1 3797168 3798373 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pha:PSHAa2207 carbohydrates permease; major facilitator superfamily transporter complement(3797168..3798373) Psychromonas ingrahamii 37 4624251 YP_944389.1 CDS Ping_3091 NC_008709.1 3799002 3799982 R PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568; hypothetical protein complement(3799002..3799982) Psychromonas ingrahamii 37 4624252 YP_944390.1 CDS Ping_3093 NC_008709.1 3800391 3801110 R PFAM: EAL domain protein; KEGG: pha:PSHAa2203 hypothetical protein; cyclic-di-GMP regulatory protein complement(3800391..3801110) Psychromonas ingrahamii 37 4624254 YP_944391.1 CDS Ping_3094 NC_008709.1 3801107 3801580 R PFAM: BLUF domain protein; KEGG: lxx:Lxx04275 photopigment and puc expression activator; BLUF domain-containing protein complement(3801107..3801580) Psychromonas ingrahamii 37 4624255 YP_944392.1 CDS Ping_3095 NC_008709.1 3802324 3802533 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3558 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(3802324..3802533) Psychromonas ingrahamii 37 4624256 YP_944393.1 CDS Ping_3097 NC_008709.1 3803388 3804653 R PFAM: major facilitator superfamily MFS_1; KEGG: sit:TM1040_1598 twin-arginine translocation pathway signal; major facilitator superfamily transporter complement(3803388..3804653) Psychromonas ingrahamii 37 4624258 YP_944394.1 CDS Ping_3098 NC_008709.1 3805603 3805812 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3558 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(3805603..3805812) Psychromonas ingrahamii 37 4624259 YP_944395.1 CDS Ping_3099 NC_008709.1 3806488 3807054 R hypothetical protein complement(3806488..3807054) Psychromonas ingrahamii 37 4624260 YP_944396.1 CDS Ping_3100 NC_008709.1 3807719 3811015 R KEGG: pgi:PG1130 TPR domain protein; hypothetical protein complement(3807719..3811015) Psychromonas ingrahamii 37 4624261 YP_944397.1 CDS Ping_3101 NC_008709.1 3812492 3813424 R hypothetical protein complement(3812492..3813424) Psychromonas ingrahamii 37 4624262 YP_944398.1 CDS Ping_3102 NC_008709.1 3814185 3814508 D hypothetical protein 3814185..3814508 Psychromonas ingrahamii 37 4624263 YP_944399.1 CDS Ping_3103 NC_008709.1 3814632 3815780 R pilin inverting protein PivNM-1B complement(3814632..3815780) Psychromonas ingrahamii 37 4624264 YP_944400.1 CDS Ping_3104 NC_008709.1 3816449 3816748 D hypothetical protein 3816449..3816748 Psychromonas ingrahamii 37 4624265 YP_944401.1 CDS Ping_3105 NC_008709.1 3817606 3819213 R KEGG: ava:Ava_3495 Tn7-like transposition protein D; transposon Tn7 transposition protein D complement(3817606..3819213) Psychromonas ingrahamii 37 4624266 YP_944402.1 CDS Ping_3106 NC_008709.1 3819210 3820112 R KEGG: ava:Ava_3489 Tn7-like transposition protein D; transposon Tn7 transposition protein D complement(3819210..3820112) Psychromonas ingrahamii 37 4624267 YP_944403.1 CDS Ping_3107 NC_008709.1 3820109 3821581 R KEGG: bca:BCE0176 Tn7-like transposition protein C; transposon Tn7 transposition protein C complement(3820109..3821581) Psychromonas ingrahamii 37 4624268 YP_944404.1 CDS Ping_3108 NC_008709.1 3821581 3823788 R KEGG: ssn:SSO_3892 putative transposase; transposon Tn7 transposition protein B complement(3821581..3823788) Psychromonas ingrahamii 37 4624269 YP_944405.1 CDS Ping_3109 NC_008709.1 3823778 3824578 R KEGG: pca:Pcar_2932 transposon Tn7 transposition protein TnsA; transposon Tn7 transposition protein A complement(3823778..3824578) Psychromonas ingrahamii 37 4624270 YP_944406.1 CDS Ping_3110 NC_008709.1 3825230 3826603 R KEGG: dvu:DVU2177 hypothetical protein; hypothetical protein complement(3825230..3826603) Psychromonas ingrahamii 37 4625902 YP_944407.1 CDS Ping_3111 NC_008709.1 3826740 3828881 R hypothetical protein complement(3826740..3828881) Psychromonas ingrahamii 37 4625903 YP_944408.1 CDS Ping_3112 NC_008709.1 3829437 3831923 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bca:BCE0855 DEAD/DEAH box helicase domain protein; ATP-dependent RNA helicase complement(3829437..3831923) Psychromonas ingrahamii 37 4625904 YP_944409.1 CDS Ping_3113 NC_008709.1 3831927 3833432 R KEGG: dps:DP2304 hypothetical protein; hypothetical protein complement(3831927..3833432) Psychromonas ingrahamii 37 4625905 YP_944410.1 CDS Ping_3114 NC_008709.1 3833416 3834453 R PFAM: beta-lactamase domain protein; KEGG: dps:DP2303 hypothetical protein; beta-lactamase domain-containing protein complement(3833416..3834453) Psychromonas ingrahamii 37 4625906 YP_944411.1 CDS Ping_3115 NC_008709.1 3835046 3836248 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: pat:Patl_0375 HI0933-like protein; FAD-dependent oxidoreductase complement(3835046..3836248) Psychromonas ingrahamii 37 4625907 YP_944412.1 CDS Ping_3116 NC_008709.1 3836705 3837487 R PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: vpa:VP2778 peptidyl-prolyl cis-trans isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(3836705..3837487) Psychromonas ingrahamii 37 4625908 YP_944413.1 CDS Ping_3117 NC_008709.1 3837992 3838201 D PFAM: SlyX family protein; KEGG: hit:NTHI0706 SlyX; SlyX family protein 3837992..3838201 Psychromonas ingrahamii 37 4625909 YP_944414.1 CDS Ping_3118 NC_008709.1 3838269 3838916 R type IV pilin complement(3838269..3838916) Psychromonas ingrahamii 37 4625910 YP_944415.1 CDS Ping_3119 NC_008709.1 3838916 3840268 R hypothetical protein complement(3838916..3840268) Psychromonas ingrahamii 37 4625911 YP_944416.1 CDS Ping_3120 NC_008709.1 3840878 3842827 D TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: vch:VC0298 acetyl-coenzyme A synthetase; acetate--CoA ligase 3840878..3842827 Psychromonas ingrahamii 37 4625912 YP_944417.1 CDS Ping_3121 NC_008709.1 3842915 3843364 D KEGG: vch:VC0297 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase, class II; 3-dehydroquinate dehydratase 3842915..3843364 Psychromonas ingrahamii 37 4625913 YP_944418.1 CDS Ping_3122 NC_008709.1 3843455 3844063 R KEGG: son:SO1717 hypothetical protein; lipoprotein complement(3843455..3844063) Psychromonas ingrahamii 37 4625914 YP_944419.1 CDS Ping_3123 NC_008709.1 3844081 3845073 R TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: vvy:VV2972 NifR3/Smm1 family protein; tRNA-dihydrouridine synthase A complement(3844081..3845073) Psychromonas ingrahamii 37 4625915 YP_944420.1 CDS Ping_3125 NC_008709.1 3845856 3847184 D KEGG: sdn:Sden_0298 hypothetical protein; hypothetical protein 3845856..3847184 Psychromonas ingrahamii 37 4625917 YP_944421.1 CDS Ping_3127 NC_008709.1 3849380 3850414 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cps:CPS_0377 ISCps1, transposase; transposase IS116/IS110/IS902 family protein complement(3849380..3850414) Psychromonas ingrahamii 37 4626138 YP_944422.1 CDS Ping_3128 NC_008709.1 3850842 3853364 D PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; KEGG: dar:Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase 3850842..3853364 Psychromonas ingrahamii 37 4626139 YP_944423.1 CDS Ping_3129 NC_008709.1 3853361 3855694 D KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 3853361..3855694 Psychromonas ingrahamii 37 4626140 YP_944424.1 CDS Ping_3131 NC_008709.1 3857795 3858115 R PFAM: ferredoxin; KEGG: jan:Jann_3168 ferredoxin; ferredoxin complement(3857795..3858115) Psychromonas ingrahamii 37 4626142 YP_944425.1 CDS Ping_3134 NC_008709.1 3859355 3860233 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: vch:VC0075 MadN protein; hypothetical protein 3859355..3860233 Psychromonas ingrahamii 37 4626145 YP_944426.1 CDS Ping_3135 NC_008709.1 3860277 3860780 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase A complement(3860277..3860780) Psychromonas ingrahamii 37 4626146 YP_944427.1 CDS Ping_3137 NC_008709.1 3861646 3862230 D PFAM: protein of unknown function DUF462; KEGG: pat:Patl_3387 protein of unknown function DUF462; ABC transporter ATP-binding protein 3861646..3862230 Psychromonas ingrahamii 37 4626148 YP_944428.1 CDS Ping_3139 NC_008709.1 3863552 3863806 D KEGG: pat:Patl_3385 hypothetical protein; hypothetical protein 3863552..3863806 Psychromonas ingrahamii 37 4626150 YP_944429.1 CDS Ping_3141 NC_008709.1 3865362 3866063 D KEGG: pat:Patl_1217 hypothetical protein; hypothetical protein 3865362..3866063 Psychromonas ingrahamii 37 4626152 YP_944430.1 CDS Ping_3143 NC_008709.1 3866752 3868578 R KEGG: dar:Daro_1362 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(3866752..3868578) Psychromonas ingrahamii 37 4626154 YP_944431.2 CDS Ping_3144 NC_008709.1 3870607 3871317 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3870607..3871317 Psychromonas ingrahamii 37 4626155 YP_944432.1 CDS Ping_3145 NC_008709.1 3872107 3872862 R PFAM: NUDIX hydrolase; KEGG: psp:PSPPH_4558 MutT domain protein-like; ADP-ribose pyrophosphatase complement(3872107..3872862) Psychromonas ingrahamii 37 4626875 YP_944433.1 CDS Ping_3146 NC_008709.1 3873499 3873846 R KEGG: hwa:HQ1719A hypothetical protein; hypothetical protein complement(3873499..3873846) Psychromonas ingrahamii 37 4626876 YP_944434.1 CDS Ping_3147 NC_008709.1 3873852 3874052 R KEGG: hwa:HQ1718A hypothetical protein; hypothetical protein complement(3873852..3874052) Psychromonas ingrahamii 37 4626877 YP_944435.1 CDS Ping_3148 NC_008709.1 3874758 3876131 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vch:VC1275 hypothetical protein; TRAP dicarboxylate transporter subunit DctM complement(3874758..3876131) Psychromonas ingrahamii 37 4626878 YP_944436.1 CDS Ping_3149 NC_008709.1 3876128 3876733 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vvy:VV2108 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ complement(3876128..3876733) Psychromonas ingrahamii 37 4626879 YP_944437.1 CDS Ping_3150 NC_008709.1 3876915 3877994 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hch:HCH_00415 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; TRAP dicarboxylate transporter subunit DctP complement(3876915..3877994) Psychromonas ingrahamii 37 4626880 YP_944438.1 CDS Ping_3151 NC_008709.1 3879376 3880305 D PFAM: Auxin Efflux Carrier; KEGG: cps:CPS_0767 auxin efflux carrier family protein; auxin efflux carrier 3879376..3880305 Psychromonas ingrahamii 37 4626881 YP_944439.1 CDS Ping_3152 NC_008709.1 3880736 3882076 R KEGG: bte:BTH_I0261 hypothetical protein; hypothetical protein complement(3880736..3882076) Psychromonas ingrahamii 37 4626882 YP_944440.1 CDS Ping_3153 NC_008709.1 3882087 3882944 R KEGG: vch:VCA0027 chitinase; hypothetical protein complement(3882087..3882944) Psychromonas ingrahamii 37 4626883 YP_944441.1 CDS Ping_3154 NC_008709.1 3883629 3884489 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tcx:Tcr_0888 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3883629..3884489 Psychromonas ingrahamii 37 4626884 YP_944442.1 CDS Ping_3155 NC_008709.1 3884850 3885257 D hypothetical protein 3884850..3885257 Psychromonas ingrahamii 37 4626885 YP_944443.1 CDS Ping_3156 NC_008709.1 3885359 3885961 D PFAM: DSBA oxidoreductase; KEGG: vvu:VV11036 thiol-disulfide isomerase and thioredoxins; thiol:disulfide interchange protein DsbA 3885359..3885961 Psychromonas ingrahamii 37 4626886 YP_944444.1 CDS Ping_3157 NC_008709.1 3886214 3887977 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: noc:Noc_2773 ABC transporter, ATPase subunit; oligopeptide ABC transporter ATP-binding protein complement(3886214..3887977) Psychromonas ingrahamii 37 4626887 YP_944445.1 CDS Ping_3158 NC_008709.1 3887977 3889224 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO0704 oligopeptide ABC transporter, permease protein; peptide ABC transporter protein inner membrane binding component complement(3887977..3889224) Psychromonas ingrahamii 37 4626888 YP_944446.1 CDS Ping_3159 NC_008709.1 3889228 3890409 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO0705 oligopeptide ABC transporter, permease protein; ABC transporter binding protein inner membrane protein complement(3889228..3890409) Psychromonas ingrahamii 37 4626889 YP_944447.1 CDS Ping_3160 NC_008709.1 3890498 3892537 R PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO0706 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; oligopeptide ABC transporter extracellular solute-binding family 5 protein complement(3890498..3892537) Psychromonas ingrahamii 37 4626890 YP_944448.1 CDS Ping_3161 NC_008709.1 3892530 3893288 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pae:PA1143 hypothetical protein; HAD family hydrolase complement(3892530..3893288) Psychromonas ingrahamii 37 4626891 YP_944449.1 CDS Ping_3162 NC_008709.1 3893288 3894136 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: vpa:VPA0353 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase complement(3893288..3894136) Psychromonas ingrahamii 37 4626892 YP_944450.1 CDS Ping_3163 NC_008709.1 3894621 3896003 D KEGG: eba:ebA1004 probable di-heme cytochrome c; hypothetical protein 3894621..3896003 Psychromonas ingrahamii 37 4626893 YP_944451.1 CDS Ping_3164 NC_008709.1 3896000 3896551 D ABC transporter heme permease 3896000..3896551 Psychromonas ingrahamii 37 4626894 YP_944452.1 CDS Ping_3165 NC_008709.1 3896568 3896774 D hypothetical protein 3896568..3896774 Psychromonas ingrahamii 37 4624711 YP_944453.1 CDS Ping_3166 NC_008709.1 3897806 3898384 D KEGG: vfi:VFA0235 glycerol uptake facilitator protein; glycerol uptake facilitator protein 3897806..3898384 Psychromonas ingrahamii 37 4624712 YP_944454.1 CDS Ping_3167 NC_008709.1 3898386 3898628 D hypothetical protein 3898386..3898628 Psychromonas ingrahamii 37 4624713 YP_944455.1 CDS glpK NC_008709.1 3898618 3900141 D Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 3898618..3900141 Psychromonas ingrahamii 37 4624714 YP_944456.1 CDS Ping_3169 NC_008709.1 3901384 3903105 R PFAM: extracellular solute-binding protein, family 1; KEGG: hch:HCH_06973 ABC-type sugar transport system, periplasmic component; sugar ABC transporter extracellular solute-binding family 1 protein complement(3901384..3903105) Psychromonas ingrahamii 37 4624715 YP_944457.1 CDS Ping_3170 NC_008709.1 3903210 3903482 R KEGG: csa:Csal_2090 hypothetical protein; hypothetical protein complement(3903210..3903482) Psychromonas ingrahamii 37 4624716 YP_944458.1 CDS Ping_3171 NC_008709.1 3903492 3904292 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_3632 binding-protein-dependent transport systems inner membrane component; ABC sugar (glycerol) transporter binding protein inner membrane protein complement(3903492..3904292) Psychromonas ingrahamii 37 4624717 YP_944459.1 CDS Ping_3172 NC_008709.1 3904313 3905173 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_3633 binding-protein-dependent transport systems inner membrane component; ABC sugar (glycerol) transporter binding protein inner membrane protein complement(3904313..3905173) Psychromonas ingrahamii 37 4624718 YP_944460.1 CDS Ping_3173 NC_008709.1 3905160 3906269 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06968 ABC-type sugar transport system, ATPase components; ABC transporter ATP-binding protein complement(3905160..3906269) Psychromonas ingrahamii 37 4624719 YP_944461.1 CDS Ping_3174 NC_008709.1 3906262 3907362 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06967 ABC-type sugar transport system, ATPase components; sugar (glycerol) ABC transporter ATP-binding protein complement(3906262..3907362) Psychromonas ingrahamii 37 4624720 YP_944462.1 CDS Ping_3175 NC_008709.1 3908145 3910034 D PFAM: sigma-54 factor, interaction domain-containing protein; GAF domain protein; SMART: AAA ATPase; KEGG: pfo:Pfl_3636 sigma-54 specific transcriptional regulator containing GAF, and fis DNA-binding domains; putative GAF sensor protein 3908145..3910034 Psychromonas ingrahamii 37 4624721 YP_944463.1 CDS Ping_3176 NC_008709.1 3910787 3911599 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: vfi:VFA0238 glycerol-3-phosphate regulon repressor; DeoR family transcriptional regulator 3910787..3911599 Psychromonas ingrahamii 37 4624722 YP_944464.1 CDS glpQ NC_008709.1 3911654 3912733 R hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase complement(3911654..3912733) Psychromonas ingrahamii 37 4624723 YP_944465.1 CDS Ping_3178 NC_008709.1 3913470 3913775 R KEGG: noc:Noc_0594 metallophosphoesterase; serine/threonine protein phosphatase complement(3913470..3913775) Psychromonas ingrahamii 37 4624724 YP_944466.1 CDS Ping_3179 NC_008709.1 3914017 3914466 D PFAM: ferric-uptake regulator; KEGG: cps:CPS_0412 zinc uptake regulation protein; Fur family ferric uptake regulator protein 3914017..3914466 Psychromonas ingrahamii 37 4624725 YP_944467.1 CDS Ping_3180 NC_008709.1 3914631 3916697 R KEGG: pub:SAR11_0935 peptidase M50; peptidase M50 complement(3914631..3916697) Psychromonas ingrahamii 37 4624726 YP_944468.1 CDS Ping_3181 NC_008709.1 3916736 3918076 R KEGG: pen:PSEEN0739 hypothetical protein; hypothetical protein complement(3916736..3918076) Psychromonas ingrahamii 37 4624727 YP_944469.1 CDS Ping_3182 NC_008709.1 3918320 3927718 R similar to RTX toxin; TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: cch:Cag_1242 VCBS; putative outer membrane adhesin-like protein complement(3918320..3927718) Psychromonas ingrahamii 37 4624728 YP_944470.1 CDS Ping_3183 NC_008709.1 3927768 3928502 R KEGG: pub:SAR11_0933 AcrA-like protein; AcrA-like protein complement(3927768..3928502) Psychromonas ingrahamii 37 4624729 YP_944471.1 CDS Ping_3184 NC_008709.1 3928502 3930049 R PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0747 efflux outer membrane protein; outer membrane efflux protein complement(3928502..3930049) Psychromonas ingrahamii 37 4624789 YP_944472.1 CDS Ping_3185 NC_008709.1 3931322 3934138 R KEGG: vfi:VF0074 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease complement(3931322..3934138) Psychromonas ingrahamii 37 4624790 YP_944473.1 CDS Ping_3186 NC_008709.1 3934575 3935690 R PFAM: phospholipid/glycerol acyltransferase; KEGG: vch:VCA0921 hypothetical protein; phospholipid/glycerol acyltransferase complement(3934575..3935690) Psychromonas ingrahamii 37 4624791 YP_944474.1 CDS fre NC_008709.1 3935848 3936543 R NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase complement(3935848..3936543) Psychromonas ingrahamii 37 4624792 YP_944475.1 CDS Ping_3188 NC_008709.1 3936607 3938076 R TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: pha:PSHAa0105 3-octaprenyl-4-hydroxybenzoate carboxylyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(3936607..3938076) Psychromonas ingrahamii 37 4624793 YP_944476.1 CDS rho NC_008709.1 3938155 3939423 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(3938155..3939423) Psychromonas ingrahamii 37 4624794 YP_944477.1 CDS Ping_3190 NC_008709.1 3939600 3939926 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ppr:PBPRA3541 putative thioredoxin; thioredoxin complement(3939600..3939926) Psychromonas ingrahamii 37 4624795 YP_944478.1 CDS Ping_3191 NC_008709.1 3940160 3941416 D enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 3940160..3941416 Psychromonas ingrahamii 37 4624796 YP_944479.1 CDS Ping_3192 NC_008709.1 3941418 3942344 D PFAM: Ppx/GppA phosphatase; KEGG: vpa:VP3003 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Ppx/GppA phosphatase 3941418..3942344 Psychromonas ingrahamii 37 4624797 YP_944480.1 CDS Ping_3194 NC_008709.1 3942983 3943468 D KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative 3942983..3943468 Psychromonas ingrahamii 37 4624799 YP_944481.1 CDS Ping_3195 NC_008709.1 3943419 3944015 D KEGG: ppr:PBPRB1782 putative transposase; putative transposase 3943419..3944015 Psychromonas ingrahamii 37 4624800 YP_944482.1 CDS Ping_3196 NC_008709.1 3950595 3950879 R PFAM: protein of unknown function DUF1255; KEGG: abo:ABO_2626 hypothetical protein; hypothetical protein complement(3950595..3950879) Psychromonas ingrahamii 37 4624805 YP_944483.1 CDS Ping_3197 NC_008709.1 3950949 3952865 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VP2788 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein complement(3950949..3952865) Psychromonas ingrahamii 37 4624806 YP_944484.1 CDS Ping_3198 NC_008709.1 3953003 3953221 D KEGG: pat:Patl_0111 hypothetical protein; hypothetical protein 3953003..3953221 Psychromonas ingrahamii 37 4624807 YP_944485.1 CDS Ping_3199 NC_008709.1 3953232 3953750 D PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: pat:Patl_3161 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 3953232..3953750 Psychromonas ingrahamii 37 4624808 YP_944486.1 CDS Ping_3200 NC_008709.1 3953975 3954754 R TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: vvu:VV10862 biotin biosynthesis protein BioH; bioH protein complement(3953975..3954754) Psychromonas ingrahamii 37 4624809 YP_944487.1 CDS Ping_3201 NC_008709.1 3954862 3955542 D KEGG: vvu:VV10863 predicted amidophosphoribosyltransferase; amidophosphoribosyltransferase 3954862..3955542 Psychromonas ingrahamii 37 4624810 YP_944488.1 CDS Ping_3202 NC_008709.1 3955845 3956426 D cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein 3955845..3956426 Psychromonas ingrahamii 37 4624811 YP_944489.1 CDS Ping_3203 NC_008709.1 3956884 3958629 D PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sde:Sde_3034 ATP-dependent RNA helicase DeaD; ATP-dependent RNA helicase 3956884..3958629 Psychromonas ingrahamii 37 4624812 YP_944490.1 CDS Ping_3204 NC_008709.1 3958845 3960203 R KEGG: vfi:VF2562 glucosamine-1-phosphate acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase complement(3958845..3960203) Psychromonas ingrahamii 37 4624813 YP_944491.1 CDS nadE NC_008709.1 3960442 3961272 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 3960442..3961272 Psychromonas ingrahamii 37 4624814 YP_944492.1 CDS Ping_3206 NC_008709.1 3961490 3962602 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 3961490..3962602 Psychromonas ingrahamii 37 4624815 YP_944493.1 CDS Ping_3207 NC_008709.1 3962694 3963698 R PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: son:SO0053 glycerol-3-phosphate dehydrogenase (NAD(P)+); glycerol-3-phosphate dehydrogenase (NAD(P)(+)) complement(3962694..3963698) Psychromonas ingrahamii 37 4624816 YP_944494.1 CDS secB NC_008709.1 3963865 3964332 R TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: sdn:Sden_3696 protein-export protein SecB; protein-export protein chaperone SecB complement(3963865..3964332) Psychromonas ingrahamii 37 4624817 YP_944495.1 CDS Ping_3209 NC_008709.1 3964418 3964669 R TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: abo:ABO_2273 glutaredoxin, putative; glutaredoxin complement(3964418..3964669) Psychromonas ingrahamii 37 4624818 YP_944496.1 CDS Ping_3210 NC_008709.1 3964673 3965101 R PFAM: Rhodanese domain protein; KEGG: eca:ECA0171 putative rhodanese-related sulfurtransferase; rhodanese domain-containing protein complement(3964673..3965101) Psychromonas ingrahamii 37 4624819 YP_944497.1 CDS Ping_3211 NC_008709.1 3965476 3967005 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 3965476..3967005 Psychromonas ingrahamii 37 4624820 YP_944498.1 CDS Ping_3212 NC_008709.1 3967122 3968375 D PFAM: peptidase M23B; KEGG: son:SO0048 peptidase, M23/M37 family; peptidase M23B 3967122..3968375 Psychromonas ingrahamii 37 4624821 YP_944499.1 CDS Ping_3213 NC_008709.1 3968604 3969026 D KEGG: plu:plu4099 hypothetical protein; hypothetical protein 3968604..3969026 Psychromonas ingrahamii 37 4624646 YP_944500.1 CDS Ping_3214 NC_008709.1 3969390 3970325 D TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sdy:SDY_3436 methylase for 50S ribosomal subunit protein L11; methyltransferase of 50S ribosomal subunit protein L11 3969390..3970325 Psychromonas ingrahamii 37 4624647 YP_944501.1 CDS Ping_3215 NC_008709.1 3970912 3971871 D TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: pha:PSHAa0347 tRNA-dihydrouridine synthase B; tRNA-dihydrouridine synthase 3970912..3971871 Psychromonas ingrahamii 37 4624648 YP_944502.1 CDS Ping_3216 NC_008709.1 3971885 3972184 D PFAM: helix-turn-helix, Fis-type; KEGG: vpa:VP2885 factor-for-inversion stimulation protein; factor-for-inversion stimulation protein 3971885..3972184 Psychromonas ingrahamii 37 4624649 YP_944503.1 CDS Ping_3217 NC_008709.1 3972302 3972883 D PFAM: protein of unknown function DUF416; KEGG: sbo:SBO_4020 hypothetical protein; hypothetical protein 3972302..3972883 Psychromonas ingrahamii 37 4624650 YP_944504.1 CDS Ping_3218 NC_008709.1 3973164 3973439 D PFAM: histone family protein DNA-binding protein; KEGG: vvy:VV3145 bacterial nucleoid DNA-binding protein; DNA-binding protein HU alpha subunit 3973164..3973439 Psychromonas ingrahamii 37 4624651 YP_944505.1 CDS Ping_3219 NC_008709.1 3973550 3974839 R KEGG: vpa:VP2898 phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; phosphoribosylamine--glycine ligase complement(3973550..3974839) Psychromonas ingrahamii 37 4624652 YP_944506.1 CDS Ping_3220 NC_008709.1 3975058 3976650 R KEGG: vpa:VP2896 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme, formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(3975058..3976650) Psychromonas ingrahamii 37 4624653 YP_944507.1 CDS Ping_3221 NC_008709.1 3976824 3977333 R GNAT family acetyltransferase complement(3976824..3977333) Psychromonas ingrahamii 37 4624654 YP_944508.1 CDS Ping_3222 NC_008709.1 3977474 3978538 R KEGG: vfi:VF2402 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(3977474..3978538) Psychromonas ingrahamii 37 4624655 YP_944509.1 CDS Ping_3223 NC_008709.1 3978621 3979442 R PFAM: NUDIX hydrolase; KEGG: ilo:IL2307 NUDIX family pyrophosphohydrolases containing a Zn-finger; nucleotide phosphate derivative pyrophosphohydrolase complement(3978621..3979442) Psychromonas ingrahamii 37 4624656 YP_944510.1 CDS Ping_3224 NC_008709.1 3979602 3980075 D binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 3979602..3980075 Psychromonas ingrahamii 37 4624657 YP_944511.1 CDS Ping_3225 NC_008709.1 3980220 3981551 R PFAM: peptidase M23B; KEGG: vch:VCA0079 hypothetical protein; peptidase M23B complement(3980220..3981551) Psychromonas ingrahamii 37 4624658 YP_944512.1 CDS Ping_3226 NC_008709.1 3981644 3981892 R hypothetical protein complement(3981644..3981892) Psychromonas ingrahamii 37 4624659 YP_944513.1 CDS Ping_3227 NC_008709.1 3982110 3983258 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3982110..3983258 Psychromonas ingrahamii 37 4624660 YP_944514.1 CDS Ping_3228 NC_008709.1 3983277 3983765 D PFAM: protein of unknown function DUF335, SprT; SMART: protein of unknown function SprT; KEGG: sdn:Sden_2972 protein of unknown function DUF335, SprT; hypothetical protein 3983277..3983765 Psychromonas ingrahamii 37 4624661 YP_944515.1 CDS Ping_3229 NC_008709.1 3983831 3984574 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: vpa:VP0954 RNA methyltransferase, TrmH family; tRNA/rRNA methyltransferase SpoU complement(3983831..3984574) Psychromonas ingrahamii 37 4624662 YP_944516.1 CDS Ping_3230 NC_008709.1 3984592 3985080 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: vvy:VV2686 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(3984592..3985080) Psychromonas ingrahamii 37 4624663 YP_944517.1 CDS Ping_3231 NC_008709.1 3985186 3985581 R KEGG: ppr:PBPRA0623 putative DNA polymerase III, psi subunit; putative DNA polymerase III, psi subunit complement(3985186..3985581) Psychromonas ingrahamii 37 4624664 YP_944518.1 CDS Ping_3232 NC_008709.1 3986650 3988263 R PFAM: FAD dependent oxidoreductase; KEGG: pat:Patl_3682 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(3986650..3988263) Psychromonas ingrahamii 37 4624665 YP_944519.1 CDS treR NC_008709.1 3989171 3990127 R regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor complement(3989171..3990127) Psychromonas ingrahamii 37 4626362 YP_944520.1 CDS Ping_3234 NC_008709.1 3990279 3991592 R PFAM: adenylosuccinate synthetase; KEGG: vpa:VP2812 adenylosuccinate synthetase; adenylosuccinate synthase complement(3990279..3991592) Psychromonas ingrahamii 37 4626363 YP_944521.1 CDS Ping_3235 NC_008709.1 3991754 3992620 R TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: cps:CPS_0328 HflC protein; HflC protein complement(3991754..3992620) Psychromonas ingrahamii 37 4626364 YP_944522.1 CDS Ping_3236 NC_008709.1 3992620 3993792 R TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: pha:PSHAa0273 hypothetical protein; HflK protein complement(3992620..3993792) Psychromonas ingrahamii 37 4626365 YP_944523.1 CDS Ping_3237 NC_008709.1 3993901 3995193 R PFAM: GTP-binding protein, HSR1-related; KEGG: pat:Patl_3979 GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein complement(3993901..3995193) Psychromonas ingrahamii 37 4626335 YP_944524.1 CDS Ping_3238 NC_008709.1 3995349 3995582 R TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: pat:Patl_3978 RNA chaperone Hfq; RNA chaperone Hfq complement(3995349..3995582) Psychromonas ingrahamii 37 4626336 YP_944525.1 CDS Ping_3239 NC_008709.1 3995986 3996903 R KEGG: ppr:PBPRA3351 putative tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(3995986..3996903) Psychromonas ingrahamii 37 4626337 YP_944526.1 CDS Ping_3240 NC_008709.1 3996896 3998782 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region, ATPase domain protein domain protein; DNA mismatch repair protein, C-terminal domain protein; KEGG: vpa:VP2819 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL complement(3996896..3998782) Psychromonas ingrahamii 37 4626338 YP_944527.1 CDS Ping_3241 NC_008709.1 3998805 4001327 R PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: ppr:PBPRA3353 putative N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(3998805..4001327) Psychromonas ingrahamii 37 4626339 YP_944528.1 CDS Ping_3242 NC_008709.1 4001324 4001782 R PFAM: protein of unknown function UPF0079; KEGG: vvy:VV3075 predicted ATPase or kinase; hypothetical protein complement(4001324..4001782) Psychromonas ingrahamii 37 4626340 YP_944529.1 CDS Ping_3243 NC_008709.1 4001776 4003284 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: ppr:PBPRA3355 hypothetical protein; carbohydrate kinase complement(4001776..4003284) Psychromonas ingrahamii 37 4626341 YP_944530.1 CDS Ping_3244 NC_008709.1 4003316 4004476 D TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: vpa:VP2822 iron-sulfur cluster-binding protein; putative iron-sulfur cluster binding protein 4003316..4004476 Psychromonas ingrahamii 37 4626342 YP_944531.1 CDS Ping_3245 NC_008709.1 4004598 4004927 D KEGG: cbu:CBU_1466 hypothetical protein; hypothetical protein 4004598..4004927 Psychromonas ingrahamii 37 4626343 YP_944532.1 CDS Ping_3246 NC_008709.1 4005040 4005447 D KEGG: ppr:PBPRB0433 hypothetical protein; hypothetical protein 4005040..4005447 Psychromonas ingrahamii 37 4626316 YP_944533.1 CDS Ping_3247 NC_008709.1 4006057 4006962 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pha:PSHAb0105 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 4006057..4006962 Psychromonas ingrahamii 37 4626317 YP_944534.1 CDS Ping_3248 NC_008709.1 4007350 4009599 R KEGG: csa:Csal_0488 hypothetical protein; hypothetical protein complement(4007350..4009599) Psychromonas ingrahamii 37 4626318 YP_944535.1 CDS Ping_3249 NC_008709.1 4010880 4012130 R KEGG: tcr:510377.134 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH; ferredoxin-type 4Fe-4S protein complement(4010880..4012130) Psychromonas ingrahamii 37 4626319 YP_944536.1 CDS Ping_3250 NC_008709.1 4012807 4014240 R KEGG: pen:PSEEN0968 outer membrane autotransporter; hypothetical protein complement(4012807..4014240) Psychromonas ingrahamii 37 4626320 YP_944537.1 CDS Ping_3251 NC_008709.1 4014920 4016344 R KEGG: son:SO0850 hypothetical protein; hypothetical protein complement(4014920..4016344) Psychromonas ingrahamii 37 4626321 YP_944538.1 CDS Ping_3252 NC_008709.1 4016371 4016952 R KEGG: son:SO0851 hypothetical protein; Type IV pili fiber-building block protein complement(4016371..4016952) Psychromonas ingrahamii 37 4626322 YP_944539.1 CDS Ping_3253 NC_008709.1 4016954 4017370 R KEGG: son:SO0852 type IV pilus assembly protein PilV; PilD-dependent protein complement(4016954..4017370) Psychromonas ingrahamii 37 4626323 YP_944540.1 CDS Ping_3254 NC_008709.1 4017367 4017825 R KEGG: son:SO0853 pilin, putative; pilin complement(4017367..4017825) Psychromonas ingrahamii 37 4626324 YP_944541.1 CDS Ping_3255 NC_008709.1 4017827 4018249 R KEGG: csa:Csal_0493 methylation; hypothetical protein complement(4017827..4018249) Psychromonas ingrahamii 37 4626325 YP_944542.1 CDS Ping_3256 NC_008709.1 4018965 4020335 D KEGG: vpa:VPA0254 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 4018965..4020335 Psychromonas ingrahamii 37 4626326 YP_944543.1 CDS Ping_3257 NC_008709.1 4020431 4020901 R PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1390 peptidyl-prolyl cis-trans isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(4020431..4020901) Psychromonas ingrahamii 37 4626327 YP_944544.1 CDS Ping_3258 NC_008709.1 4021104 4021577 R PFAM: protein of unknown function DUF88; KEGG: son:SO3490 hypothetical protein; hypothetical protein complement(4021104..4021577) Psychromonas ingrahamii 37 4626328 YP_944545.1 CDS Ping_3259 NC_008709.1 4021687 4022976 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pat:Patl_2135 DEAD/DEAH box helicase-like; ATP-dependent RNA helicase complement(4021687..4022976) Psychromonas ingrahamii 37 4626329 YP_944546.1 CDS Ping_3260 NC_008709.1 4023238 4024809 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvy:VV1708 ABC-type transport system, ATPase component; ABC transporter ATP-binding protein 4023238..4024809 Psychromonas ingrahamii 37 4626330 YP_944547.1 CDS Ping_3261 NC_008709.1 4024900 4025748 R KEGG: son:SO1154 hypothetical protein; hypothetical protein complement(4024900..4025748) Psychromonas ingrahamii 37 4626331 YP_944548.1 CDS Ping_3262 NC_008709.1 4026137 4027189 D PFAM: aldo/keto reductase; KEGG: vfi:VFA0836 Tas protein; aldo/keto reductase 4026137..4027189 Psychromonas ingrahamii 37 4626332 YP_944549.1 CDS clpB-2 NC_008709.1 4027274 4029847 R PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: vch:VC0711 clpB protein; chaperone ClpB complement(4027274..4029847) Psychromonas ingrahamii 37 4626333 YP_944550.1 CDS Ping_3264 NC_008709.1 4029975 4030718 R PFAM: protein of unknown function DUF152; KEGG: vch:VC0710 conserved hypothetical protein; hypothetical protein complement(4029975..4030718) Psychromonas ingrahamii 37 4626334 YP_944551.1 CDS Ping_3265 NC_008709.1 4030732 4031700 R KEGG: eca:ECA3347 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase complement(4030732..4031700) Psychromonas ingrahamii 37 4626298 YP_944552.1 CDS Ping_3266 NC_008709.1 4031898 4032671 D KEGG: sdn:Sden_2864 putative lipoprotein; putative lipoprotein 4031898..4032671 Psychromonas ingrahamii 37 4626299 YP_944553.1 CDS Ping_3267 NC_008709.1 4032808 4033146 R PFAM: nitrogen regulatory protein P-II; KEGG: cps:CPS_3917 Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(4032808..4033146) Psychromonas ingrahamii 37 4626300 YP_944554.1 CDS Ping_3268 NC_008709.1 4033300 4034244 R KEGG: pha:PSHAa0921 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase complement(4033300..4034244) Psychromonas ingrahamii 37 4626301 YP_944555.1 CDS Ping_3269 NC_008709.1 4034291 4034740 R PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: ppr:PBPRA0593 putative peptidyl-prolyl cis-trans isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(4034291..4034740) Psychromonas ingrahamii 37 4626302 YP_944556.1 CDS Ping_3270 NC_008709.1 4034733 4035254 R KEGG: son:SO3531 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8, signal peptidase II; lipoprotein signal peptidase complement(4034733..4035254) Psychromonas ingrahamii 37 4626303 YP_944557.1 CDS Ping_3271 NC_008709.1 4035358 4038192 R TIGRFAM: isoleucyl-tRNA synthetase; KEGG: vpa:VP0534 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(4035358..4038192) Psychromonas ingrahamii 37 4626304 YP_944558.1 CDS Ping_3272 NC_008709.1 4038304 4039236 R TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: vpa:VP0533 riboflavin kinase/FMN adenylyltransferase; bifunctional riboflavin kinase and FMN adenylyltransferase complement(4038304..4039236) Psychromonas ingrahamii 37 4626305 YP_944559.1 CDS Ping_3273 NC_008709.1 4039310 4040875 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: vfi:VF0465 virulence factor MviN; integral membrane protein MviN complement(4039310..4040875) Psychromonas ingrahamii 37 4626306 YP_944560.1 CDS Ping_3274 NC_008709.1 4041190 4041450 D PFAM: ribosomal protein S20; KEGG: ppr:PBPRA0587 putative ribosomal protein S20; 30S ribosomal protein S20 4041190..4041450 Psychromonas ingrahamii 37 4626307 YP_944561.1 CDS Ping_3275 NC_008709.1 4042817 4043077 R hypothetical protein complement(4042817..4043077) Psychromonas ingrahamii 37 4626308 YP_944562.1 CDS Ping_3276 NC_008709.1 4043203 4043421 R hypothetical protein complement(4043203..4043421) Psychromonas ingrahamii 37 4626309 YP_944563.1 CDS Ping_3277 NC_008709.1 4043423 4044403 R TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase, class II (D, K and N); KEGG: vpa:VP2838 lysyl-tRNA synthetase-related protein; lysyl-tRNA synthetase-like protein GenX complement(4043423..4044403) Psychromonas ingrahamii 37 4626310 YP_944564.1 CDS Ping_3278 NC_008709.1 4044692 4046503 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 4044692..4046503 Psychromonas ingrahamii 37 4626311 YP_944565.1 CDS Ping_3279 NC_008709.1 4046503 4047240 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 4046503..4047240 Psychromonas ingrahamii 37 4626312 YP_944566.1 CDS Ping_3280 NC_008709.1 4047403 4047792 D PFAM: fumarate reductase, subunit C; KEGG: cvi:CV3367 fumarate reductase, subunit C; fumarate reductase subunit C 4047403..4047792 Psychromonas ingrahamii 37 4626313 YP_944567.1 CDS Ping_3281 NC_008709.1 4047804 4048181 D PFAM: fumarate reductase, D subunit; KEGG: vpa:VP2843 fumarate reductase, 13 kDa hydrophobic protein; fumarate reductase subunit D 4047804..4048181 Psychromonas ingrahamii 37 4626314 YP_944568.1 CDS Ping_3282 NC_008709.1 4048270 4048839 R TIGRFAM: translation elongation factor P; PFAM: Elongation factor P/YeiP protein; Elongation factor, KOW domain protein; KEGG: vpa:VP2845 elongation factor P; translation elongation factor P complement(4048270..4048839) Psychromonas ingrahamii 37 4626315 YP_944569.1 CDS Ping_3283 NC_008709.1 4048871 4049884 D TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: vfi:VF2339 lysine 2,3-aminomutase; lysine 2,3-aminomutase YodO family protein 4048871..4049884 Psychromonas ingrahamii 37 4625766 YP_944570.1 CDS Ping_3284 NC_008709.1 4050054 4050395 D KEGG: pat:Patl_0438 hypothetical protein; hypothetical protein 4050054..4050395 Psychromonas ingrahamii 37 4625767 YP_944571.1 CDS Ping_3285 NC_008709.1 4057106 4057663 R TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: sdn:Sden_1383 D,D-heptose 1,7-bisphosphate phosphatase; D,D-heptose 1,7-bisphosphate phosphatase complement(4057106..4057663) Psychromonas ingrahamii 37 4625771 YP_944572.1 CDS Ping_3286 NC_008709.1 4057698 4058132 D KEGG: sdn:Sden_2541 lipoprotein, putative; putative lipoprotein 4057698..4058132 Psychromonas ingrahamii 37 4625772 YP_944573.1 CDS Ping_3287 NC_008709.1 4058122 4058838 D PFAM: protein of unknown function UPF0066; KEGG: ypa:YPA_0546 hypothetical protein; hypothetical protein 4058122..4058838 Psychromonas ingrahamii 37 4625773 YP_944574.1 CDS Ping_3288 NC_008709.1 4058807 4059373 R PFAM: Rhomboid family protein; KEGG: pha:PSHAa2191 rhomboid protein; rhomboid family protein complement(4058807..4059373) Psychromonas ingrahamii 37 4625774 YP_944575.1 CDS Ping_3289 NC_008709.1 4059526 4061241 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 4059526..4061241 Psychromonas ingrahamii 37 4625775 YP_944576.1 CDS Ping_3290 NC_008709.1 4061419 4062513 D PFAM: alpha/beta hydrolase fold; KEGG: ppr:PBPRB1931 hypothetical lysophospholipase L2; alpha/beta hydrolase fold protein 4061419..4062513 Psychromonas ingrahamii 37 4625776 YP_944577.1 CDS Ping_3291 NC_008709.1 4062501 4063292 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cvi:CV0977 hypothetical protein; cof family hydrolase 4062501..4063292 Psychromonas ingrahamii 37 4625777 YP_944578.1 CDS Ping_3292 NC_008709.1 4063426 4064982 D KEGG: vch:VC0132 hypothetical protein; hypothetical protein 4063426..4064982 Psychromonas ingrahamii 37 4625778 YP_944579.1 CDS Ping_3293 NC_008709.1 4065027 4066469 R KEGG: ppr:PBPRA0599 hypothetical D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(4065027..4066469) Psychromonas ingrahamii 37 4625779 YP_944580.1 CDS pyrB NC_008709.1 4066632 4067567 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4066632..4067567 Psychromonas ingrahamii 37 4625780 YP_944581.1 CDS Ping_3295 NC_008709.1 4067577 4068032 D involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 4067577..4068032 Psychromonas ingrahamii 37 4625781 YP_944582.1 CDS Ping_3296 NC_008709.1 4068218 4068730 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 4068218..4068730 Psychromonas ingrahamii 37 4625782 YP_944583.1 CDS Ping_3297 NC_008709.1 4068888 4069112 R PFAM: protein of unknown function DUF904; KEGG: vvy:VV3019 hypothetical protein; hypothetical protein complement(4068888..4069112) Psychromonas ingrahamii 37 4625783 YP_944584.1 CDS Ping_3298 NC_008709.1 4069273 4069494 D PFAM: protein of unknown function DUF1653; KEGG: ilo:IL1584 hypothetical protein; hypothetical protein 4069273..4069494 Psychromonas ingrahamii 37 4625784 YP_944585.1 CDS cysE NC_008709.1 4069640 4070422 R catalyzes the O-acetylation of serine; serine acetyltransferase complement(4069640..4070422) Psychromonas ingrahamii 37 4625749 YP_944586.1 CDS Ping_3300 NC_008709.1 4070422 4071378 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: spt:SPA3904 ferrous iron efflux protein F; iron and zinc efflux system protein complement(4070422..4071378) Psychromonas ingrahamii 37 4625750 YP_944587.1 CDS Ping_3301 NC_008709.1 4071874 4072338 D TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ppr:PBPRA0229 putative rRNA methylase, SpoU family; RNA methyltransferase 4071874..4072338 Psychromonas ingrahamii 37 4625751 YP_944588.1 CDS Ping_3302 NC_008709.1 4072383 4074101 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: ppr:PBPRA0568 putative single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ complement(4072383..4074101) Psychromonas ingrahamii 37 4625752 YP_944589.1 CDS Ping_3303 NC_008709.1 4074208 4074963 R KEGG: son:SO0951 thiol:disulfide interchange protein DsbC; thiol:disulfide interchange protein DsbC complement(4074208..4074963) Psychromonas ingrahamii 37 4625753 YP_944590.1 CDS Ping_3304 NC_008709.1 4075113 4076009 R TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sfx:S3079 site-specific recombinase; tyrosine recombinase XerD complement(4075113..4076009) Psychromonas ingrahamii 37 4625754 YP_944591.1 CDS Ping_3305 NC_008709.1 4076064 4076582 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 4076064..4076582 Psychromonas ingrahamii 37 4625755 YP_944592.1 CDS Ping_3306 NC_008709.1 4076889 4077758 D PFAM: formate/nitrite transporter; KEGG: yps:YPTB1409 putative FNT family formate efflux transporter focA; formate/nitrite transporter 4076889..4077758 Psychromonas ingrahamii 37 4625756 YP_944593.1 CDS Ping_3307 NC_008709.1 4077834 4080119 D KEGG: yps:YPTB1408 formate acetyltransferase 1; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; formate acetyltransferase 4077834..4080119 Psychromonas ingrahamii 37 4625757 YP_944594.1 CDS pflA NC_008709.1 4080285 4081025 D activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 4080285..4081025 Psychromonas ingrahamii 37 4625758 YP_944595.1 CDS Ping_3309 NC_008709.1 4081311 4082129 D PFAM: putative methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: vfi:VF1796 23S rRNA m(1)G 745 methyltransferase; rRNA (guanine-N(1)-)-methyltransferase 4081311..4082129 Psychromonas ingrahamii 37 4625759 YP_944596.1 CDS Ping_3310 NC_008709.1 4082233 4082772 R PFAM: protein of unknown function DUF412; KEGG: yps:YPTB2595 hypothetical protein; hypothetical protein complement(4082233..4082772) Psychromonas ingrahamii 37 4625760 YP_944597.1 CDS Ping_3311 NC_008709.1 4083031 4084245 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 4083031..4084245 Psychromonas ingrahamii 37 4625761 YP_944598.1 CDS Ping_3312 NC_008709.1 4084304 4086466 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 4084304..4086466 Psychromonas ingrahamii 37 4625762 YP_944599.1 CDS Ping_3313 NC_008709.1 4086577 4087521 R KEGG: cps:CPS_4405 conserved hypothetical protein; S-adenosylmethionine-dependent methyltransferase complement(4086577..4087521) Psychromonas ingrahamii 37 4625763 YP_944600.1 CDS Ping_3314 NC_008709.1 4087521 4088582 R PFAM: protein of unknown function UPF0118; KEGG: sdn:Sden_2360 protein of unknown function UPF0118; hypothetical protein complement(4087521..4088582) Psychromonas ingrahamii 37 4625764 YP_944601.1 CDS Ping_3315 NC_008709.1 4088948 4091620 D PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: vch:VC2033 alcohol dehydrogenase/acetaldehyde dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 4088948..4091620 Psychromonas ingrahamii 37 4625765 YP_944602.1 CDS cls NC_008709.1 4091798 4093276 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(4091798..4093276) Psychromonas ingrahamii 37 4625730 YP_944603.1 CDS Ping_3317 NC_008709.1 4093677 4096346 R KEGG: pen:PSEEN0412 sensory box proten ; GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(4093677..4096346) Psychromonas ingrahamii 37 4625731 YP_944604.1 CDS Ping_3318 NC_008709.1 4096466 4100359 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(4096466..4100359) Psychromonas ingrahamii 37 4625732 YP_944605.1 CDS Ping_3319 NC_008709.1 4100625 4102781 D PFAM: extracellular solute-binding protein, family 3; Lytic transglycosylase, catalytic; KEGG: ppr:PBPRA0787 putative transglycosylase, Slt family; lytic transglycosylase 4100625..4102781 Psychromonas ingrahamii 37 4625733 YP_944606.1 CDS Ping_3320 NC_008709.1 4103468 4104151 R hypothetical protein complement(4103468..4104151) Psychromonas ingrahamii 37 4625734 YP_944607.1 CDS Ping_3321 NC_008709.1 4104202 4104948 R hypothetical protein complement(4104202..4104948) Psychromonas ingrahamii 37 4625735 YP_944608.1 CDS Ping_3322 NC_008709.1 4105409 4105579 D KEGG: cps:CPS_3294 hypothetical protein; hypothetical protein 4105409..4105579 Psychromonas ingrahamii 37 4625736 YP_944609.1 CDS Ping_3323 NC_008709.1 4105586 4106134 D KEGG: ava:Ava_5067 formylmethionine deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 4105586..4106134 Psychromonas ingrahamii 37 4625737 YP_944610.1 CDS Ping_3324 NC_008709.1 4106170 4106700 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sdn:Sden_1271 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(4106170..4106700) Psychromonas ingrahamii 37 4625738 YP_944611.1 CDS Ping_3325 NC_008709.1 4106700 4107572 R PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: vfi:VF2188 type 4 prepilin peptidase; prepilin peptidase complement(4106700..4107572) Psychromonas ingrahamii 37 4625739 YP_944612.1 CDS Ping_3326 NC_008709.1 4107597 4108031 R PFAM: nucleoside diphosphate kinase; KEGG: vpa:VP0604 nucleoside diphosphate kinase; nucleoside-diphosphate kinase complement(4107597..4108031) Psychromonas ingrahamii 37 4625740 YP_944613.1 CDS Ping_3327 NC_008709.1 4108110 4108988 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: vvy:VV2535 hypothetical protein; endonuclease/exonuclease/phosphatase 4108110..4108988 Psychromonas ingrahamii 37 4625741 YP_944614.1 CDS Ping_3328 NC_008709.1 4109152 4111287 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: gsu:GSU1927 sensory box/response regulator; response regulator receiver modulated diguanylate cyclase/phosphodiesterase complement(4109152..4111287) Psychromonas ingrahamii 37 4625742 YP_944615.1 CDS Ping_3329 NC_008709.1 4111289 4114195 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: hch:HCH_03646 signal transduction histidine kinase; hybrid sensor and regulator fused complement(4111289..4114195) Psychromonas ingrahamii 37 4625743 YP_944616.1 CDS Ping_3330 NC_008709.1 4114192 4115349 R KEGG: hch:HCH_03645 ABC-type uncharacterized transport system, periplasmic component; ABC transporter periplasmic protein complement(4114192..4115349) Psychromonas ingrahamii 37 4625744 YP_944617.1 CDS Ping_3331 NC_008709.1 4115398 4116558 R KEGG: hch:HCH_03644 ABC-type uncharacterized transport system, periplasmic component; ABC transporter periplasmic protein complement(4115398..4116558) Psychromonas ingrahamii 37 4625745 YP_944618.1 CDS Ping_3332 NC_008709.1 4116643 4118235 R KEGG: hch:HCH_03643 hypothetical protein; hypothetical protein complement(4116643..4118235) Psychromonas ingrahamii 37 4625746 YP_944619.1 CDS Ping_3333 NC_008709.1 4118237 4119943 R PFAM: major facilitator superfamily MFS_1; KEGG: hch:HCH_03642 major facilitator superfamily protein; major facilitator superfamily transporter complement(4118237..4119943) Psychromonas ingrahamii 37 4625747 YP_944620.1 CDS Ping_3334 NC_008709.1 4119944 4121092 R TIGRFAM: diaminopimelate epimerase; KEGG: hch:HCH_03641 diaminopimelate epimerase; diaminopimelate epimerase complement(4119944..4121092) Psychromonas ingrahamii 37 4625748 YP_944621.1 CDS Ping_3335 NC_008709.1 4122992 4123531 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(4122992..4123531) Psychromonas ingrahamii 37 4625714 YP_944622.1 CDS Ping_3336 NC_008709.1 4123628 4124671 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 4123628..4124671 Psychromonas ingrahamii 37 4625715 YP_944623.1 CDS Ping_3337 NC_008709.1 4124738 4125598 D KEGG: ilo:IL2302 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 4124738..4125598 Psychromonas ingrahamii 37 4625716 YP_944624.1 CDS Ping_3338 NC_008709.1 4125614 4127149 D TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: ppr:PBPRA3596 putative threonine dehydratase; threonine dehydratase, biosynthetic 4125614..4127149 Psychromonas ingrahamii 37 4625717 YP_944625.1 CDS Ping_3339 NC_008709.1 4127163 4128227 D PFAM: Ion transport 2 domain protein,; KEGG: pha:PSHAa0137 potassium channel protein; Ion transport 2 domain-containing protein 4127163..4128227 Psychromonas ingrahamii 37 4625718 YP_944626.1 CDS Ping_3340 NC_008709.1 4128734 4130575 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pca:Pcar_0454 TonB-dependent receptor, putative; TonB-dependent receptor, plug 4128734..4130575 Psychromonas ingrahamii 37 4625719 YP_944627.1 CDS Ping_3341 NC_008709.1 4130600 4131607 D PFAM: periplasmic binding protein; KEGG: vfi:VFA0973 ABC transporter, periplasmic component; Fe ABC transporter 4130600..4131607 Psychromonas ingrahamii 37 4625720 YP_944628.1 CDS fecD NC_008709.1 4131597 4132634 D PFAM: transport system permease protein; KEGG: dra:DRB0015 putative hemin transport system permease protein; iron(III) dicitrate transport system permease FecD 4131597..4132634 Psychromonas ingrahamii 37 4625721 YP_944629.1 CDS Ping_3343 NC_008709.1 4132648 4133469 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbu:Mbur_1545 ABC transporter, ATPase subunit; ABC transporter for cobalamin/Fe3+-siderophores ATP-binding protein 4132648..4133469 Psychromonas ingrahamii 37 4625722 YP_944630.1 CDS Ping_3344 NC_008709.1 4133611 4134609 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: ava:Ava_2465 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 4133611..4134609 Psychromonas ingrahamii 37 4625723 YP_944631.1 CDS Ping_3345 NC_008709.1 4134606 4135010 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: syf:Synpcc7942_2428 biopolymer transport ExbD like protein; biopolymer transport protein ExbD/TolR 4134606..4135010 Psychromonas ingrahamii 37 4625724 YP_944632.1 CDS Ping_3346 NC_008709.1 4135026 4135877 D TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: ppr:PBPRA2103 hypothetical TonB protein; TonB family protein 4135026..4135877 Psychromonas ingrahamii 37 4625725 YP_944633.1 CDS Ping_3347 NC_008709.1 4136110 4136877 R PFAM: SapC family protein; KEGG: sil:SPO2717 SapC protein, putative; SapC family protein complement(4136110..4136877) Psychromonas ingrahamii 37 4625726 YP_944634.1 CDS Ping_3348 NC_008709.1 4137805 4138848 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: cps:CPS_0931 oxidoreductase, zinc-binding; alcohol dehydrogenase complement(4137805..4138848) Psychromonas ingrahamii 37 4625727 YP_944635.1 CDS Ping_3349 NC_008709.1 4138961 4140118 R PFAM: iron-containing alcohol dehydrogenase; KEGG: cps:CPS_3111 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase complement(4138961..4140118) Psychromonas ingrahamii 37 4625728 YP_944636.1 CDS Ping_3350 NC_008709.1 4140208 4140903 R PFAM: ThiJ/PfpI domain protein; KEGG: cps:CPS_0933 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein complement(4140208..4140903) Psychromonas ingrahamii 37 4625729 YP_944637.1 CDS Ping_3351 NC_008709.1 4141062 4141982 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_0934 transcriptional regulator, LysR family; LysR family transcriptional regulator 4141062..4141982 Psychromonas ingrahamii 37 4625696 YP_944638.1 CDS Ping_3352 NC_008709.1 4142183 4142659 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: pfo:Pfl_4939 transcriptional regulator, AsnC family; AsnC/Lrp family transcriptional regulator complement(4142183..4142659) Psychromonas ingrahamii 37 4625697 YP_944639.1 CDS Ping_3353 NC_008709.1 4142979 4144715 D TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: hch:HCH_05146 2-isopropylmalate synthase; 2-isopropylmalate synthase 4142979..4144715 Psychromonas ingrahamii 37 4625698 YP_944640.1 CDS Ping_3354 NC_008709.1 4144889 4146778 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(4144889..4146778) Psychromonas ingrahamii 37 4625699 YP_944641.1 CDS Ping_3356 NC_008709.1 4148234 4149094 R PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: gsu:GSU1372 3-hydroxyisobutyrate dehydrogenase family protein; 2-hydroxy-3-oxopropionate reductase complement(4148234..4149094) Psychromonas ingrahamii 37 4625701 YP_944642.1 CDS Ping_3357 NC_008709.1 4149435 4150007 R PFAM: protein of unknown function UPF0227; KEGG: vpa:VP0429 hypothetical protein; hypothetical protein complement(4149435..4150007) Psychromonas ingrahamii 37 4625702 YP_944643.1 CDS Ping_3358 NC_008709.1 4150007 4150843 R PFAM: metallophosphoesterase; Calcineurin phosphoesterase C-terminal domain protein; KEGG: vch:VC2433 cyclic AMP phosphodiesterase; cyclic AMP phosphodiesterase complement(4150007..4150843) Psychromonas ingrahamii 37 4625703 YP_944644.1 CDS Ping_3359 NC_008709.1 4151114 4151734 R PFAM: NUDIX hydrolase; KEGG: ppr:PBPRA0451 putative MutT/nudix family protein; nucleoside diphosphate pyrophosphatase complement(4151114..4151734) Psychromonas ingrahamii 37 4625704 YP_944645.1 CDS Ping_3360 NC_008709.1 4151835 4153169 D TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: vvy:VV0583 outer membrane protein; type I secretion outer membrane protein, TolC family protein 4151835..4153169 Psychromonas ingrahamii 37 4625705 YP_944646.1 CDS Ping_3361 NC_008709.1 4153361 4154791 R catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(4153361..4154791) Psychromonas ingrahamii 37 4625706 YP_944647.1 CDS Ping_3362 NC_008709.1 4154973 4156898 D PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: ppr:PBPRA1212 putative response regulator; sensor histidine kinase 4154973..4156898 Psychromonas ingrahamii 37 4625707 YP_944648.1 CDS Ping_3363 NC_008709.1 4156948 4157319 R KEGG: eca:ECA1174 hypothetical protein; hypothetical protein complement(4156948..4157319) Psychromonas ingrahamii 37 4625708 YP_944649.1 CDS rplS NC_008709.1 4157427 4157786 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(4157427..4157786) Psychromonas ingrahamii 37 4625709 YP_944650.1 CDS Ping_3365 NC_008709.1 4157828 4158574 R KEGG: pha:PSHAa0946 tRNA (guanine-7-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase complement(4157828..4158574) Psychromonas ingrahamii 37 4625710 YP_944651.1 CDS Ping_3366 NC_008709.1 4158594 4159121 R TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: vch:VC0562 16S rRNA processing protein RimM; 16S rRNA processing protein RimM complement(4158594..4159121) Psychromonas ingrahamii 37 4625677 YP_944652.1 CDS Ping_3367 NC_008709.1 4159147 4159395 R PFAM: ribosomal protein S16; KEGG: cps:CPS_4069 ribosomal protein S16; 30S ribosomal protein S16 complement(4159147..4159395) Psychromonas ingrahamii 37 4625678 YP_944653.1 CDS Ping_3368 NC_008709.1 4159641 4161014 R KEGG: son:SO1356 signal recognition particle protein Ffh; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(4159641..4161014) Psychromonas ingrahamii 37 4625679 YP_944654.1 CDS Ping_3369 NC_008709.1 4161565 4162356 D PFAM: cytochrome c assembly protein; KEGG: vfi:VF0547 CcsA-related protein; cytochrome c assembly protein 4161565..4162356 Psychromonas ingrahamii 37 4625680 YP_944655.1 CDS Ping_3370 NC_008709.1 4162792 4164063 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: pat:Patl_1668 protein of unknown function DUF21; hemolysin 4162792..4164063 Psychromonas ingrahamii 37 4625681 YP_944656.1 CDS Ping_3371 NC_008709.1 4164164 4164673 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(4164164..4164673) Psychromonas ingrahamii 37 4625682 YP_944657.1 CDS Ping_3372 NC_008709.1 4164709 4165323 R KEGG: cps:CPS_4077 putative lipoprotein; putative lipoprotein complement(4164709..4165323) Psychromonas ingrahamii 37 4625683 YP_944658.1 CDS Ping_3373 NC_008709.1 4165579 4167159 R TIGRFAM: glutamate--cysteine ligase; KEGG: ppr:PBPRA3047 putative glutamate-cysteine ligase; glutamate--cysteine ligase complement(4165579..4167159) Psychromonas ingrahamii 37 4625684 YP_944659.1 CDS Ping_3374 NC_008709.1 4167295 4167711 R KEGG: son:SO3561 hypothetical protein; hypothetical protein complement(4167295..4167711) Psychromonas ingrahamii 37 4625685 YP_944660.1 CDS Ping_3375 NC_008709.1 4167786 4168916 R KEGG: vpa:VP2543 oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; oxaloacetate decarboxylase subunit beta complement(4167786..4168916) Psychromonas ingrahamii 37 4625686 YP_944661.1 CDS Ping_3376 NC_008709.1 4168927 4170741 R catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase complement(4168927..4170741) Psychromonas ingrahamii 37 4625687 YP_944662.1 CDS Ping_3377 NC_008709.1 4170752 4171000 R TIGRFAM: sodium pump decarboxylases, gamma subunit; PFAM: sodium pump decarboxylase, gamma subunit; KEGG: ilo:IL1736 oxaloacetate decarboxylase, gamma subunit; oxaloacetate decarboxylase subunit gamma complement(4170752..4171000) Psychromonas ingrahamii 37 4625688 YP_944663.1 CDS Ping_3378 NC_008709.1 4172257 4172433 R PFAM: carbon storage regulator; KEGG: pat:Patl_3014 carbon storage regulator, CsrA; carbon storage regulator CsrA complement(4172257..4172433) Psychromonas ingrahamii 37 4625693 YP_944664.1 CDS Ping_3379 NC_008709.1 4172531 4173763 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(4172531..4173763) Psychromonas ingrahamii 37 4625694 YP_944665.1 CDS Ping_3380 NC_008709.1 4173810 4176413 R KEGG: pat:Patl_3015 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase, class IIc; phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; alanyl-tRNA synthetase complement(4173810..4176413) Psychromonas ingrahamii 37 4625695 YP_944666.1 CDS recA NC_008709.1 4176925 4178001 R KEGG: stm:STM2829 DNA strand exchange and recombination protein with proteiase and nuclease activity; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recombination protein RecA complement(4176925..4178001) Psychromonas ingrahamii 37 4625669 YP_944667.1 CDS Ping_3382 NC_008709.1 4178147 4178644 R PFAM: CinA domain protein; KEGG: vch:VC0542 competence/damage-inducible protein CinA C-terminal domain; competence-damaged protein CinA complement(4178147..4178644) Psychromonas ingrahamii 37 4625670 YP_944668.1 CDS Ping_3383 NC_008709.1 4178736 4181306 D TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: plu:plu0722 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 4178736..4181306 Psychromonas ingrahamii 37 4625671 YP_944669.1 CDS Ping_3384 NC_008709.1 4181819 4182220 R hypothetical protein complement(4181819..4182220) Psychromonas ingrahamii 37 4625672 YP_944670.1 CDS Ping_3385 NC_008709.1 4182336 4183220 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sde:Sde_0637 metal dependent phosphohydrolase; LysR family transcriptional regulator complement(4182336..4183220) Psychromonas ingrahamii 37 4625673 YP_944671.1 CDS Ping_3386 NC_008709.1 4183334 4185637 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4183334..4185637 Psychromonas ingrahamii 37 4625674 YP_944672.1 CDS Ping_3387 NC_008709.1 4185723 4186295 R KEGG: sdn:Sden_3057 hypothetical protein; hypothetical protein complement(4185723..4186295) Psychromonas ingrahamii 37 4625675 YP_944673.1 CDS Ping_3388 NC_008709.1 4186695 4188155 D KEGG: son:SO0942 hypothetical protein; hypothetical protein 4186695..4188155 Psychromonas ingrahamii 37 4625676 YP_944674.1 CDS Ping_3389 NC_008709.1 4188168 4189022 R PFAM: protein of unknown function DUF519; KEGG: tcx:Tcr_1053 protein of unknown function DUF519; DNA (exogenous) processing protein complement(4188168..4189022) Psychromonas ingrahamii 37 4625559 YP_944675.1 CDS Ping_3390 NC_008709.1 4189161 4190528 D PFAM: major facilitator superfamily MFS_1; KEGG: sdn:Sden_3314 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4189161..4190528 Psychromonas ingrahamii 37 4625560 YP_944676.1 CDS Ping_3391 NC_008709.1 4190562 4191230 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ppr:PBPRA3289 putative single-strand binding protein; single-strand binding protein 4190562..4191230 Psychromonas ingrahamii 37 4625561 YP_944677.1 CDS Ping_3392 NC_008709.1 4191712 4192932 D KEGG: vfi:VFA0276 sensory transduction/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 4191712..4192932 Psychromonas ingrahamii 37 4625562 YP_944678.1 CDS Ping_3393 NC_008709.1 4193325 4194671 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dar:Daro_2752 metal-dependent phosphohydrolase, HD subdomain; metal dependent phosphohydrolase complement(4193325..4194671) Psychromonas ingrahamii 37 4625563 YP_944679.1 CDS ansA NC_008709.1 4195300 4196310 R converts asparagine to aspartate and ammonia; asparaginase complement(4195300..4196310) Psychromonas ingrahamii 37 4625564 YP_944680.1 CDS Ping_3395 NC_008709.1 4196857 4197492 D PFAM: Alternative oxidase; KEGG: vfi:VF0578 alternative oxidase; alternative oxidase 4196857..4197492 Psychromonas ingrahamii 37 4625565 YP_944681.1 CDS Ping_3396 NC_008709.1 4197575 4199485 R KEGG: psb:Psyr_4948 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; 23S rRNA Gm2251-methyltransferase complement(4197575..4199485) Psychromonas ingrahamii 37 4625566 YP_944682.1 CDS Ping_3397 NC_008709.1 4199663 4200382 D PFAM: DTW domain containing protein; KEGG: ppr:PBPRA1746 conserved hypothetical protein; DTW domain-containing protein 4199663..4200382 Psychromonas ingrahamii 37 4625567 YP_944683.1 CDS Ping_3398 NC_008709.1 4200515 4201315 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: ppr:PBPRA0136 conserved hypothetical protein; cof family hydrolase 4200515..4201315 Psychromonas ingrahamii 37 4625622 YP_944684.1 CDS Ping_3401 NC_008709.1 4202327 4203070 D hypothetical protein 4202327..4203070 Psychromonas ingrahamii 37 4625625 YP_944685.1 CDS Ping_3402 NC_008709.1 4203141 4203938 D glucosamine-6-phosphate isomerase 4203141..4203938 Psychromonas ingrahamii 37 4625626 YP_944686.1 CDS Ping_3403 NC_008709.1 4204204 4204758 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mca:MCA2450 molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(4204204..4204758) Psychromonas ingrahamii 37 4625627 YP_944687.1 CDS Ping_3404 NC_008709.1 4204945 4205580 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pfl:PFL_1765 transporter, LysE family; lysine exporter protein LysE/YggA 4204945..4205580 Psychromonas ingrahamii 37 4625628 YP_944688.1 CDS Ping_3405 NC_008709.1 4205761 4206675 R PFAM: aldo/keto reductase; KEGG: vch:VCA0859 oxidoreductase, aldo/keto reductase 2 family; aldo/keto reductase complement(4205761..4206675) Psychromonas ingrahamii 37 4625629 YP_944689.1 CDS Ping_3406 NC_008709.1 4206974 4207393 R KEGG: vpa:VP2044 hypothetical protein; hypothetical protein complement(4206974..4207393) Psychromonas ingrahamii 37 4625630 YP_944690.1 CDS Ping_3407 NC_008709.1 4207796 4208782 D PFAM: Rhodanese domain protein; KEGG: pat:Patl_0964 rhodanese-like; rhodanese domain-containing protein 4207796..4208782 Psychromonas ingrahamii 37 4625631 YP_944691.1 CDS Ping_3408 NC_008709.1 4209317 4210900 D PFAM: Alkaline phosphatase; KEGG: cps:CPS_3932 alkaline phosphatase family protein; alkaline phosphatase 4209317..4210900 Psychromonas ingrahamii 37 4625632 YP_944692.1 CDS Ping_3409 NC_008709.1 4210910 4212568 D PFAM: Alkaline phosphatase; KEGG: pha:PSHAa2976 alkaline phosphatase; alkaline phosphatase 4210910..4212568 Psychromonas ingrahamii 37 4625633 YP_944693.1 CDS Ping_3410 NC_008709.1 4212594 4213373 D KEGG: pha:PSHAa2975 hypothetical protein ; secreted protein; hypothetical protein 4212594..4213373 Psychromonas ingrahamii 37 4625634 YP_944694.1 CDS Ping_3411 NC_008709.1 4213818 4215443 R hypothetical protein complement(4213818..4215443) Psychromonas ingrahamii 37 4625635 YP_944695.1 CDS Ping_3412 NC_008709.1 4215446 4216108 R KEGG: cjr:CJE0702 chemotaxis protein MotB, putative; peptidoglycan-associated (lipo)proteins-like protein complement(4215446..4216108) Psychromonas ingrahamii 37 4625636 YP_944696.1 CDS Ping_3413 NC_008709.1 4216108 4216737 R hypothetical protein complement(4216108..4216737) Psychromonas ingrahamii 37 4625637 YP_944697.1 CDS Ping_3414 NC_008709.1 4216804 4218168 R KEGG: vch:VC1764 hypothetical protein; hypothetical protein complement(4216804..4218168) Psychromonas ingrahamii 37 4625638 YP_944698.1 CDS Ping_3415 NC_008709.1 4218171 4218509 R hypothetical protein complement(4218171..4218509) Psychromonas ingrahamii 37 4625639 YP_944699.1 CDS Ping_3416 NC_008709.1 4220407 4221102 D KEGG: dps:DP1715 hypothetical protein; hypothetical protein 4220407..4221102 Psychromonas ingrahamii 37 4625604 YP_944700.1 CDS Ping_3417 NC_008709.1 4222506 4225010 D KEGG: vpa:VP2807 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein; ribonuclease R 4222506..4225010 Psychromonas ingrahamii 37 4625608 YP_944701.1 CDS Ping_3418 NC_008709.1 4225117 4225857 D Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 4225117..4225857 Psychromonas ingrahamii 37 4625609 YP_944702.1 CDS Ping_3419 NC_008709.1 4226131 4226532 D PFAM: ribosomal protein S6; KEGG: vpa:VP2740 ribosomal protein S6; 30S ribosomal protein S6 4226131..4226532 Psychromonas ingrahamii 37 4625610 YP_944703.1 CDS Ping_3420 NC_008709.1 4226556 4226846 D PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ppr:PBPRA3338 putative Primosomal replication protein N; single-strand binding protein/primosomal replication protein n 4226556..4226846 Psychromonas ingrahamii 37 4625611 YP_944704.1 CDS Ping_3421 NC_008709.1 4226856 4227083 D PFAM: ribosomal protein S18; KEGG: son:SO3928 ribosomal protein S18; 30S ribosomal protein S18 4226856..4227083 Psychromonas ingrahamii 37 4625612 YP_944705.1 CDS Ping_3422 NC_008709.1 4227100 4227552 D PFAM: ribosomal protein L9; KEGG: vpa:VP2737 ribosomal protein L9; 50S ribosomal protein L9 4227100..4227552 Psychromonas ingrahamii 37 4625613 YP_944706.1 CDS Ping_3423 NC_008709.1 4228093 4229832 D KEGG: sar:SAR1897 hypothetical protein; hypothetical protein 4228093..4229832 Psychromonas ingrahamii 37 4625614 YP_944707.1 CDS Ping_3424 NC_008709.1 4230464 4231396 R KEGG: mag:amb3955 exopolyphosphatase-related protein; exopolyphosphatase-like protein complement(4230464..4231396) Psychromonas ingrahamii 37 4625615 YP_944708.1 CDS Ping_3425 NC_008709.1 4232406 4234466 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pub:SAR11_1297 glycine betaine/L-proline transport system permease; ABC transporter substrate binding inner membrane protein complement(4232406..4234466) Psychromonas ingrahamii 37 4625616 YP_944709.1 CDS Ping_3426 NC_008709.1 4234466 4235536 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pub:SAR11_1298 glycine betaine/L-proline transport ATP-binding protein; ABC transporter ATP-binding protein complement(4234466..4235536) Psychromonas ingrahamii 37 4625617 YP_944710.1 CDS Ping_3427 NC_008709.1 4235784 4236716 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pub:SAR11_1302 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(4235784..4236716) Psychromonas ingrahamii 37 4625618 YP_944711.1 CDS Ping_3428 NC_008709.1 4237748 4239277 R TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: plu:plu3548 lysyl-tRNA synthetase (lysine--tRNA ligase); lysyl-tRNA synthetase complement(4237748..4239277) Psychromonas ingrahamii 37 4625619 YP_944712.1 CDS Ping_3429 NC_008709.1 4239405 4240394 R TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: vch:VC0663 peptide chain release factor 2; peptide chain release factor 2 complement(4239405..4240394) Psychromonas ingrahamii 37 4625620 YP_944713.1 CDS Ping_3430 NC_008709.1 4241074 4242798 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: ppr:PBPRA0425 putative acetolactate synthase III, largesubunit; acetolactate synthase large subunit 4241074..4242798 Psychromonas ingrahamii 37 4625621 YP_944714.1 CDS Ping_3431 NC_008709.1 4242791 4243291 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: ppr:PBPRA0426 putative acetolactate synthase III, small subunit; acetolactate synthase small subunit 4242791..4243291 Psychromonas ingrahamii 37 4625585 YP_944715.1 CDS Ping_3432 NC_008709.1 4243581 4244018 D PFAM: protein of unknown function DUF461; KEGG: tcx:Tcr_1566 protein of unknown function DUF461; hypothetical protein 4243581..4244018 Psychromonas ingrahamii 37 4625586 YP_944716.1 CDS Ping_3433 NC_008709.1 4244055 4244684 D KEGG: pha:PSHAa0505 hypothetical protein; hypothetical protein 4244055..4244684 Psychromonas ingrahamii 37 4625587 YP_944717.1 CDS Ping_3434 NC_008709.1 4244919 4246721 D TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: ppr:PBPRA3321 putative sulfite reductase (NADPH) flavoprotein alpha-component; sulfite reductase (NADPH) flavoprotein, subunit alpha 4244919..4246721 Psychromonas ingrahamii 37 4625588 YP_944718.1 CDS Ping_3435 NC_008709.1 4246721 4248409 D hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 4246721..4248409 Psychromonas ingrahamii 37 4625589 YP_944719.1 CDS Ping_3436 NC_008709.1 4248402 4249166 D PFAM: phosphoadenosine phosphosulfate reductase; KEGG: vpa:VP2720 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 4248402..4249166 Psychromonas ingrahamii 37 4625590 YP_944720.1 CDS Ping_3437 NC_008709.1 4249454 4250638 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(4249454..4250638) Psychromonas ingrahamii 37 4625591 YP_944721.1 CDS Ping_3438 NC_008709.1 4250713 4252806 R TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; elongation factor G, domain IV; KEGG: vpa:VP2771 elongation factor G; translation elongation factor G complement(4250713..4252806) Psychromonas ingrahamii 37 4625592 YP_944722.1 CDS Ping_3439 NC_008709.1 4252879 4253349 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(4252879..4253349) Psychromonas ingrahamii 37 4625593 YP_944723.1 CDS rpsL NC_008709.1 4253433 4253807 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(4253433..4253807) Psychromonas ingrahamii 37 4625594 YP_944724.1 CDS Ping_3441 NC_008709.1 4254012 4254302 R PFAM: DsrH family protein; KEGG: ppr:PBPRA0312 putative uncharacterized protein involved in oxidation of intracellular sulfur; intracellular sulfur oxidation protein of DsrH family protein complement(4254012..4254302) Psychromonas ingrahamii 37 4625595 YP_944725.1 CDS Ping_3442 NC_008709.1 4254467 4254829 R PFAM: DsrE family protein; KEGG: pat:Patl_2453 DsrE-like protein; intraceullular sulfur oxidation protein of DsrE family protein complement(4254467..4254829) Psychromonas ingrahamii 37 4625596 YP_944726.1 CDS Ping_3443 NC_008709.1 4254848 4255249 R PFAM: DsrE family protein; KEGG: yps:YPTB3708 putative uncharacterized protein involved in oxidation of intracellular sulfur; intracellular sulfur oxidation protein of DsrE family protein complement(4254848..4255249) Psychromonas ingrahamii 37 4625597 YP_944727.1 CDS Ping_3444 NC_008709.1 4255353 4255742 R TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: mta:Moth_1495 YjgF-like protein; endoribonuclease L-PSP complement(4255353..4255742) Psychromonas ingrahamii 37 4625598 YP_944728.1 CDS Ping_3445 NC_008709.1 4255946 4260166 R KEGG: sdn:Sden_0164 DNA-directed RNA polymerase, subunit beta-prime; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' complement(4255946..4260166) Psychromonas ingrahamii 37 4625599 YP_944729.1 CDS Ping_3446 NC_008709.1 4260240 4264280 R KEGG: son:SO0224 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 3; DNA-directed RNA polymerase subunit beta complement(4260240..4264280) Psychromonas ingrahamii 37 4625600 YP_944730.1 CDS Ping_3447 NC_008709.1 4264520 4264885 R TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12-like; KEGG: sdy:SDY_3742 50S ribosomal subunit protein L7/L12; 50S ribosomal protein L7/L12 complement(4264520..4264885) Psychromonas ingrahamii 37 4625601 YP_944731.1 CDS Ping_3448 NC_008709.1 4264925 4265428 R PFAM: ribosomal protein L10; KEGG: sdn:Sden_0161 ribosomal protein L10; 50S ribosomal protein L10 complement(4264925..4265428) Psychromonas ingrahamii 37 4625602 YP_944732.1 CDS Ping_3449 NC_008709.1 4265713 4266417 R PFAM: ribosomal protein L1; KEGG: son:SO0221 50S ribosomal protein L1; 50S ribosomal protein L1 complement(4265713..4266417) Psychromonas ingrahamii 37 4625603 YP_944733.1 CDS Ping_3450 NC_008709.1 4266422 4266883 R PFAM: ribosomal protein L11; KEGG: eca:ECA0219 50S ribosomal protein L11; 50S ribosomal protein L11 complement(4266422..4266883) Psychromonas ingrahamii 37 4625568 YP_944734.1 CDS Ping_3451 NC_008709.1 4267010 4267561 R KEGG: vvy:VV3164 transcription antiterminator; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor complement(4267010..4267561) Psychromonas ingrahamii 37 4625569 YP_944735.1 CDS Ping_3452 NC_008709.1 4267571 4267951 R TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: vvy:VV3165 preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(4267571..4267951) Psychromonas ingrahamii 37 4625570 YP_944736.1 CDS Ping_3453 NC_008709.1 4268617 4270395 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(4268617..4270395) Psychromonas ingrahamii 37 4625571 YP_944737.1 CDS Ping_3454 NC_008709.1 4270395 4272206 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(4270395..4272206) Psychromonas ingrahamii 37 4625572 YP_944738.1 CDS Ping_3456 NC_008709.1 4273704 4275611 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG: vvu:VV10775 predicted nucleoside-diphosphate sugar epimerase; nucleotide sugar epimerase/dehydratase complement(4273704..4275611) Psychromonas ingrahamii 37 4625574 YP_944739.1 CDS Ping_3457 NC_008709.1 4275862 4277388 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; sugar transferase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pen:PSEEN1504 UDP-glucose 4-epimerase; nucleoside-diphosphate-sugar epimerase complement(4275862..4277388) Psychromonas ingrahamii 37 4625575 YP_944740.1 CDS Ping_3458 NC_008709.1 4277385 4278155 R KEGG: neu:NE0499 glycosyl transferase, family 2; glycosyltransferase-like protein complement(4277385..4278155) Psychromonas ingrahamii 37 4625576 YP_944741.1 CDS Ping_3459 NC_008709.1 4278566 4281166 R PFAM: Methyltransferase type 11; KEGG: ade:Adeh_2530 hypothetical protein; type 11 methyltransferase complement(4278566..4281166) Psychromonas ingrahamii 37 4625577 YP_944742.1 CDS Ping_3460 NC_008709.1 4281176 4282498 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_3159 polysaccharide ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein complement(4281176..4282498) Psychromonas ingrahamii 37 4625578 YP_944743.1 CDS Ping_3461 NC_008709.1 4282488 4283303 R PFAM: ABC-2 type transporter; KEGG: pfl:PFL_5495 ABC-2 type transporte; ABC-2 type transporter permease complement(4282488..4283303) Psychromonas ingrahamii 37 4625579 YP_944744.1 CDS Ping_3462 NC_008709.1 4283296 4283853 R KEGG: sdn:Sden_2660 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(4283296..4283853) Psychromonas ingrahamii 37 4625580 YP_944745.1 CDS Ping_3463 NC_008709.1 4283869 4284753 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sdn:Sden_2661 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(4283869..4284753) Psychromonas ingrahamii 37 4625581 YP_944746.1 CDS Ping_3464 NC_008709.1 4284758 4285639 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: vfi:VF0167 Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(4284758..4285639) Psychromonas ingrahamii 37 4625582 YP_944747.1 CDS Ping_3465 NC_008709.1 4285636 4286718 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: vfi:VF0166 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(4285636..4286718) Psychromonas ingrahamii 37 4625583 YP_944748.1 CDS Ping_3466 NC_008709.1 4287209 4287718 D KEGG: vvy:VV1006 transcription antiterminator; TIGRFAM: transcriptional activator RfaH; PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; NusG antitermination factor 4287209..4287718 Psychromonas ingrahamii 37 4625584 YP_944749.1 CDS Ping_3467 NC_008709.1 4287722 4288564 D PFAM: Rhomboid family protein; KEGG: sdn:Sden_3618 rhomboid-like protein; membrane serine peptidase 4287722..4288564 Psychromonas ingrahamii 37 4625540 YP_944750.1 CDS Ping_3468 NC_008709.1 4288855 4289415 D PFAM: Chorismate lyase; KEGG: cps:CPS_0125 putative chorismate--pyruvate lyase; chorismate lyase 4288855..4289415 Psychromonas ingrahamii 37 4625541 YP_944751.1 CDS Ping_3469 NC_008709.1 4289412 4290275 D TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: vvy:VV0121 4-hydroxybenzoate polyprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 4289412..4290275 Psychromonas ingrahamii 37 4625542 YP_944752.1 CDS Ping_3470 NC_008709.1 4290451 4290765 R TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; KEGG: vch:VC1917 hypothetical protein; helix-hairpin-helix repeat-containing competence protein ComEA complement(4290451..4290765) Psychromonas ingrahamii 37 4625543 YP_944753.1 CDS Ping_3471 NC_008709.1 4290994 4292445 R Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(4290994..4292445) Psychromonas ingrahamii 37 4625544 YP_944754.1 CDS Ping_3472 NC_008709.1 4292564 4293295 R TIGRFAM: Glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; Redoxin domain protein; KEGG: vch:VC2637 peroxiredoxin family protein/glutaredoxin; glutaredoxin family protein complement(4292564..4293295) Psychromonas ingrahamii 37 4625545 YP_944755.1 CDS Ping_3473 NC_008709.1 4293654 4295663 R TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: vch:VC0167 ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep complement(4293654..4295663) Psychromonas ingrahamii 37 4625546 YP_944756.1 CDS Ping_3474 NC_008709.1 4295884 4296459 D PFAM: regulatory protein, TetR; KEGG: vpa:VP0040 transcriptional regulator, TetR family; TetR family transcriptional regulator 4295884..4296459 Psychromonas ingrahamii 37 4625547 YP_944757.1 CDS Ping_3475 NC_008709.1 4296481 4297602 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vvy:VV0038 membrane-fusion protein; secretion protein HlyD-like protein 4296481..4297602 Psychromonas ingrahamii 37 4625548 YP_944758.1 CDS Ping_3476 NC_008709.1 4297611 4300697 D PFAM: acriflavin resistance protein; KEGG: vfi:VF2524 acriflavin resistance plasma membrane protein; acriflavin resistance protein 4297611..4300697 Psychromonas ingrahamii 37 4625549 YP_944759.1 CDS Ping_3477 NC_008709.1 4301304 4302326 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: vvy:VV2639 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(4301304..4302326) Psychromonas ingrahamii 37 4625550 YP_944760.1 CDS pyrE NC_008709.1 4302467 4303108 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(4302467..4303108) Psychromonas ingrahamii 37 4625551 YP_944761.1 CDS Ping_3479 NC_008709.1 4303114 4303833 R KEGG: eca:ECA0140 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; ribonuclease PH complement(4303114..4303833) Psychromonas ingrahamii 37 4625552 YP_944762.1 CDS Ping_3480 NC_008709.1 4303962 4306838 R PFAM: peptidase M16 domain protein; KEGG: pha:PSHAb0349 putative TonB-dependent receptor protease/peptidase; peptidase M16 domain-containing protein complement(4303962..4306838) Psychromonas ingrahamii 37 4625553 YP_944763.1 CDS Ping_3481 NC_008709.1 4307005 4307442 R PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: eca:ECA0032 D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(4307005..4307442) Psychromonas ingrahamii 37 4625554 YP_944764.1 CDS rbn NC_008709.1 4307439 4308317 R RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN complement(4307439..4308317) Psychromonas ingrahamii 37 4625555 YP_944765.1 CDS bipA NC_008709.1 4308488 4310311 R TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: pat:Patl_1024 GTP-binding protein TypA; GTP-binding virulence regulator protein BipA complement(4308488..4310311) Psychromonas ingrahamii 37 4625556 YP_944766.1 CDS Ping_3484 NC_008709.1 4310715 4312133 D KEGG: vch:VC2746 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase 4310715..4312133 Psychromonas ingrahamii 37 4625557 YP_944767.1 CDS Ping_3485 NC_008709.1 4312455 4314629 D PFAM: glutamine synthetase, catalytic region; KEGG: pat:Patl_4201 glutamine synthetase, catalytic region; glutamine synthetase 4312455..4314629 Psychromonas ingrahamii 37 4625558 YP_944768.1 CDS Ping_3486 NC_008709.1 4314812 4315357 D KEGG: vpa:VP0120 hypothetical protein; hypothetical protein 4314812..4315357 Psychromonas ingrahamii 37 4625520 YP_944769.1 CDS Ping_3487 NC_008709.1 4315368 4316438 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: vpa:VP0119 nitrogen regulation protein; sensor histidine kinase 4315368..4316438 Psychromonas ingrahamii 37 4625521 YP_944770.1 CDS Ping_3488 NC_008709.1 4316493 4317893 D KEGG: son:SO4472 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Fis family nitrogen metabolism transcriptional regulator NtrC 4316493..4317893 Psychromonas ingrahamii 37 4625522 YP_944771.1 CDS Ping_3489 NC_008709.1 4317906 4318196 R KEGG: mmu:673901 hypothetical protein LOC673901 PROSITE: PHE_RICH SER_RICH; hypothetical protein complement(4317906..4318196) Psychromonas ingrahamii 37 4625523 YP_944772.1 CDS Ping_3490 NC_008709.1 4318272 4319768 R TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: vfi:VFA0829 sodium/proline symporter; sodium/proline symporter complement(4318272..4319768) Psychromonas ingrahamii 37 4625524 YP_944773.1 CDS Ping_3491 NC_008709.1 4319945 4321243 R hypothetical protein complement(4319945..4321243) Psychromonas ingrahamii 37 4625525 YP_944774.1 CDS Ping_3492 NC_008709.1 4321316 4323388 R KEGG: vpa:VP0157 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: helicase domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecG complement(4321316..4323388) Psychromonas ingrahamii 37 4625526 YP_944775.1 CDS Ping_3493 NC_008709.1 4323494 4324351 D PFAM: phospholipase A1; KEGG: pha:PSHAa0175 phospholipase A precursor; phospholipase A(1) 4323494..4324351 Psychromonas ingrahamii 37 4625527 YP_944776.1 CDS Ping_3494 NC_008709.1 4324676 4326070 R PFAM: GTP-binding protein, HSR1-related; KEGG: hch:HCH_03855 predicted GTPase; HSR1-like GTP-binding protein complement(4324676..4326070) Psychromonas ingrahamii 37 4625528 YP_944777.1 CDS Ping_3495 NC_008709.1 4326063 4327493 R KEGG: hch:HCH_03856 hypothetical protein; hypothetical protein complement(4326063..4327493) Psychromonas ingrahamii 37 4625529 YP_944778.1 CDS Ping_3496 NC_008709.1 4327511 4328215 R specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase complement(4327511..4328215) Psychromonas ingrahamii 37 4625530 YP_944779.1 CDS Ping_3497 NC_008709.1 4328573 4329478 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppr:PBPRA0273 putative Hydrogen peroxide-inducible genes activator; LysR family transcriptional regulator 4328573..4329478 Psychromonas ingrahamii 37 4625531 YP_944780.1 CDS Ping_3498 NC_008709.1 4329583 4329963 R PFAM: ribosomal protein L17; KEGG: pmu:PM1389 50S ribosomal protein L17; 50S ribosomal protein L17 complement(4329583..4329963) Psychromonas ingrahamii 37 4625532 YP_944781.1 CDS Ping_3499 NC_008709.1 4330000 4330986 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(4330000..4330986) Psychromonas ingrahamii 37 4625533 YP_944782.1 CDS rpsD NC_008709.1 4331012 4331632 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(4331012..4331632) Psychromonas ingrahamii 37 4625534 YP_944783.1 CDS Ping_3501 NC_008709.1 4331666 4332055 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(4331666..4332055) Psychromonas ingrahamii 37 4625535 YP_944784.1 CDS rpsM NC_008709.1 4332067 4332423 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(4332067..4332423) Psychromonas ingrahamii 37 4625536 YP_944785.1 CDS rpmJ NC_008709.1 4332554 4332667 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(4332554..4332667) Psychromonas ingrahamii 37 4625537 YP_944786.1 CDS Ping_3504 NC_008709.1 4332705 4334033 R TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: ppr:PBPRA0340 putative preprotein translocase, SecY subunit; preprotein translocase subunit SecY complement(4332705..4334033) Psychromonas ingrahamii 37 4625538 YP_944787.1 CDS Ping_3505 NC_008709.1 4334040 4334474 R PFAM: ribosomal protein L15; KEGG: ppr:PBPRA0339 putative ribosomal protein L15; 50S ribosomal protein L15 complement(4334040..4334474) Psychromonas ingrahamii 37 4625539 YP_944788.1 CDS Ping_3506 NC_008709.1 4334477 4334653 R PFAM: ribosomal protein L30; KEGG: vvy:VV0393 ribosomal protein L30/L7E; 50S ribosomal protein L30 complement(4334477..4334653) Psychromonas ingrahamii 37 4625506 YP_944789.1 CDS rpsE NC_008709.1 4334660 4335163 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(4334660..4335163) Psychromonas ingrahamii 37 4625507 YP_944790.1 CDS Ping_3508 NC_008709.1 4335172 4335522 R TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: ppr:PBPRA0336 putative ribosomal protein L18; 50S ribosomal protein L18 complement(4335172..4335522) Psychromonas ingrahamii 37 4625508 YP_944791.1 CDS Ping_3509 NC_008709.1 4335532 4336065 R PFAM: ribosomal protein L6; KEGG: stm:STM3425 50S ribosomal subunit protein L6; 50S ribosomal protein L6 complement(4335532..4336065) Psychromonas ingrahamii 37 4625509 YP_944792.1 CDS Ping_3510 NC_008709.1 4336077 4336469 R PFAM: ribosomal protein S8; KEGG: vvy:VV0389 ribosomal protein S8; 30S ribosomal protein S8 complement(4336077..4336469) Psychromonas ingrahamii 37 4625510 YP_944793.1 CDS Ping_3511 NC_008709.1 4336495 4336800 R PFAM: ribosomal protein S14; KEGG: pha:PSHAa2817 30S ribosomal subunit protein S14; 30S ribosomal protein S14 complement(4336495..4336800) Psychromonas ingrahamii 37 4625511 YP_944794.1 CDS rplE NC_008709.1 4336812 4337351 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(4336812..4337351) Psychromonas ingrahamii 37 4625512 YP_944795.1 CDS Ping_3513 NC_008709.1 4337364 4337678 R KEGG: sfx:S4421 50S ribosomal subunit protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW (Kyrpides, Ouzounis, Woese) domain protein; 50S ribosomal protein L24 complement(4337364..4337678) Psychromonas ingrahamii 37 4625513 YP_944796.1 CDS Ping_3514 NC_008709.1 4337689 4338057 R TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: cps:CPS_0611 ribosomal protein L14; 50S ribosomal protein L14 complement(4337689..4338057) Psychromonas ingrahamii 37 4625514 YP_944797.1 CDS Ping_3515 NC_008709.1 4338216 4338467 R PFAM: ribosomal protein S17; KEGG: sfr:Sfri_0157 ribosomal protein S17; 30S ribosomal protein S17 complement(4338216..4338467) Psychromonas ingrahamii 37 4625515 YP_944798.1 CDS Ping_3516 NC_008709.1 4338467 4338658 R PFAM: ribosomal protein L29; KEGG: sdy:SDY_3488 50S ribosomal subunit protein L29; 50S ribosomal protein L29 complement(4338467..4338658) Psychromonas ingrahamii 37 4625516 YP_944799.1 CDS rplP NC_008709.1 4338658 4339068 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(4338658..4339068) Psychromonas ingrahamii 37 4625517 YP_944800.1 CDS Ping_3518 NC_008709.1 4339080 4339772 R KEGG: msu:MS2042 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3-C-terminal domain protein; KH, type 2 domain protein; Ribosomal protein S3, N-terminal domain; SMART: KH domain protein; 30S ribosomal protein S3 complement(4339080..4339772) Psychromonas ingrahamii 37 4625518 YP_944801.1 CDS Ping_3519 NC_008709.1 4339776 4340111 R TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: son:SO0236 50S ribosomal protein L22; 50S ribosomal protein L22 complement(4339776..4340111) Psychromonas ingrahamii 37 4625519 YP_944802.1 CDS Ping_3520 NC_008709.1 4340120 4340398 R TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: vch:VC2592 30S ribosomal protein S19; 30S ribosomal protein S19 complement(4340120..4340398) Psychromonas ingrahamii 37 4623994 YP_944803.1 CDS rplB NC_008709.1 4340413 4341240 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(4340413..4341240) Psychromonas ingrahamii 37 4623995 YP_944804.1 CDS Ping_3522 NC_008709.1 4341252 4341551 R PFAM: Ribosomal protein L25/L23; KEGG: pha:PSHAa0146 50S ribosomal protein L23; 50S ribosomal protein L25 complement(4341252..4341551) Psychromonas ingrahamii 37 4623996 YP_944805.1 CDS rplD NC_008709.1 4341548 4342153 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(4341548..4342153) Psychromonas ingrahamii 37 4623997 YP_944806.1 CDS Ping_3524 NC_008709.1 4342168 4342806 R PFAM: ribosomal protein L3; KEGG: pha:PSHAa0144 50S ribosomal subunit protein L3; 50S ribosomal protein L3 complement(4342168..4342806) Psychromonas ingrahamii 37 4623998 YP_944807.1 CDS Ping_3525 NC_008709.1 4342822 4343133 R PFAM: ribosomal protein S10; KEGG: bas:BUsg506 30S ribosomal protein S10; 30S ribosomal protein S10 complement(4342822..4343133) Psychromonas ingrahamii 37 4623999 YP_944808.1 CDS Ping_3526 NC_008709.1 4343517 4345571 D PFAM: GCN5-related N-acetyltransferase; protein of unknown function DUF699, ATPase putative; KEGG: ppr:PBPRB2023 hypothetical protein; ATPase 4343517..4345571 Psychromonas ingrahamii 37 4624000 YP_944809.1 CDS Ping_3527 NC_008709.1 4345568 4346260 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_1090 pseudouridine synthase, Rsu; pseudouridine synthase 4345568..4346260 Psychromonas ingrahamii 37 4624001 YP_944810.1 CDS Ping_3528 NC_008709.1 4346685 4347353 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vvy:VVA0445 CbbY family protein; HAD family hydrolase 4346685..4347353 Psychromonas ingrahamii 37 4624002 YP_944811.1 CDS Ping_3529 NC_008709.1 4347292 4348188 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pat:Patl_1436 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4347292..4348188) Psychromonas ingrahamii 37 4624003 YP_944812.1 CDS Ping_3530 NC_008709.1 4348364 4349494 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cps:CPS_0817 alcohol dehydrogenase, class III; alcohol dehydrogenase 4348364..4349494 Psychromonas ingrahamii 37 4624004 YP_944813.1 CDS Ping_3531 NC_008709.1 4349596 4350447 D PFAM: putative esterase; KEGG: son:SOA0160 esterase, putative; carboxylesterase 4349596..4350447 Psychromonas ingrahamii 37 4624005 YP_944814.1 CDS Ping_3532 NC_008709.1 4350813 4351196 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppr:PBPRB0596 putative glyoxylase I family protein; bleomycin resistance protein complement(4350813..4351196) Psychromonas ingrahamii 37 4624006 YP_944815.1 CDS Ping_3533 NC_008709.1 4351256 4351744 R PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_2540 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(4351256..4351744) Psychromonas ingrahamii 37 4624007 YP_944816.1 CDS Ping_3534 NC_008709.1 4352031 4352684 R KEGG: vfi:VFA0140 hypothetical protein; hypothetical protein complement(4352031..4352684) Psychromonas ingrahamii 37 4624008 YP_944817.1 CDS Ping_3535 NC_008709.1 4352820 4353746 R PFAM: oxidoreductase domain protein; KEGG: vpa:VPA1281 oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein complement(4352820..4353746) Psychromonas ingrahamii 37 4624009 YP_944818.1 CDS metQ NC_008709.1 4353889 4354704 R TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ppr:PBPRA2942 putative lipoprotein YaeC; DL-methionine transporter substrate-binding subunit complement(4353889..4354704) Psychromonas ingrahamii 37 4624010 YP_944819.1 CDS Ping_3537 NC_008709.1 4354761 4355447 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRA2941 putative ABC-type metal ion transport system,permease component; ABC transporter substrate binding inner membrane protein complement(4354761..4355447) Psychromonas ingrahamii 37 4624011 YP_944820.1 CDS metN NC_008709.1 4355437 4356471 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(4355437..4356471) Psychromonas ingrahamii 37 4625269 YP_944821.1 CDS Ping_3539 NC_008709.1 4357080 4357643 D KEGG: sdn:Sden_0725 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase 4357080..4357643 Psychromonas ingrahamii 37 4625270 YP_944822.1 CDS Ping_3540 NC_008709.1 4357687 4358292 R PFAM: protein of unknown function DUF479; KEGG: vpa:VPA0844 hypothetical protein; hypothetical protein complement(4357687..4358292) Psychromonas ingrahamii 37 4625271 YP_944823.1 CDS Ping_3541 NC_008709.1 4358431 4358976 R KEGG: sdn:Sden_0279 hypothetical protein; hypothetical protein complement(4358431..4358976) Psychromonas ingrahamii 37 4625255 YP_944824.1 CDS Ping_3542 NC_008709.1 4359880 4360884 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cvi:CV1630 probable oxidoreductase; alcohol dehydrogenase 4359880..4360884 Psychromonas ingrahamii 37 4625256 YP_944825.1 CDS Ping_3543 NC_008709.1 4361000 4361512 R KEGG: hch:HCH_06430 predicted transcription regulator, contains HTH domain (MarR family); putative transcriptional regulator complement(4361000..4361512) Psychromonas ingrahamii 37 4625257 YP_944826.1 CDS Ping_3544 NC_008709.1 4361525 4362829 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: hch:HCH_06432 TRAP-type C4-dicarboxylate transport system, large permease component; TRAP dicarboxylate transporter subunit DctM complement(4361525..4362829) Psychromonas ingrahamii 37 4625258 YP_944827.1 CDS Ping_3545 NC_008709.1 4362826 4363392 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: hch:HCH_06433 TRAP-type C4-dicarboxylate transport system, small permease component; tripartite ATP-independent periplasmic transporter DctQ complement(4362826..4363392) Psychromonas ingrahamii 37 4625259 YP_944828.1 CDS Ping_3546 NC_008709.1 4363485 4364456 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hch:HCH_06434 TRAP-type C4-dicarboxylate transport system, periplasmic component; TRAP dicarboxylate transporter subunit DctP complement(4363485..4364456) Psychromonas ingrahamii 37 4625260 YP_944829.1 CDS Ping_3547 NC_008709.1 4364801 4365532 D PFAM: LamB/YcsF family protein; KEGG: ppr:PBPRA1281 hypothetical protein; LamB/YcsF family protein 4364801..4365532 Psychromonas ingrahamii 37 4625261 YP_944830.1 CDS Ping_3548 NC_008709.1 4365529 4366233 D PFAM: Allophanate hydrolase subunit 1; KEGG: ppr:PBPRA1282 hypothetical protein; allophanate hydrolase subunit 1 4365529..4366233 Psychromonas ingrahamii 37 4625262 YP_944831.1 CDS Ping_3549 NC_008709.1 4366325 4367272 D KEGG: vpa:VPA0875 putative carboxylase; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; urea amidolyase-like protein 4366325..4367272 Psychromonas ingrahamii 37 4625263 YP_944832.1 CDS Ping_3550 NC_008709.1 4367303 4368286 R binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR complement(4367303..4368286) Psychromonas ingrahamii 37 4625264 YP_944833.1 CDS Ping_3551 NC_008709.1 4368602 4369723 D phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 4368602..4369723 Psychromonas ingrahamii 37 4625265 YP_944834.1 CDS Ping_3552 NC_008709.1 4369720 4370661 D PFAM: PfkB domain protein; KEGG: ppr:PBPRA1574 putative 1-phosphofructokinase; 1-phosphofructokinase 4369720..4370661 Psychromonas ingrahamii 37 4625266 YP_944835.1 CDS Ping_3553 NC_008709.1 4370726 4372453 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: ppr:PBPRA1575 PTS system, fructose-specific IIBC component; PTS system fructose-specific IIBC protein 4370726..4372453 Psychromonas ingrahamii 37 4625267 YP_944836.1 CDS Ping_3554 NC_008709.1 4372589 4373050 D TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: cac:CAC0726 ribose 5-phosphate isomerase RpiB; sugar-phosphate isomerases, RpiB/LacA/LacB family protein 4372589..4373050 Psychromonas ingrahamii 37 4625268 YP_944837.1 CDS Ping_3555 NC_008709.1 4373166 4374179 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 4373166..4374179 Psychromonas ingrahamii 37 4625179 YP_944838.1 CDS Ping_3556 NC_008709.1 4374406 4374963 R PFAM: Lipocalin family protein; KEGG: son:SO1691 lipoprotein Blc; lipocalin family protein complement(4374406..4374963) Psychromonas ingrahamii 37 4625180 YP_944839.1 CDS Ping_3557 NC_008709.1 4375190 4376212 D KEGG: vvy:VV2407 hypothetical protein; hypothetical protein 4375190..4376212 Psychromonas ingrahamii 37 4625181 YP_944840.1 CDS Ping_3558 NC_008709.1 4376888 4377592 R KEGG: sdn:Sden_3652 flageller protein FlgA; flagellar basal body P-ring biosynthesis protein-like protein complement(4376888..4377592) Psychromonas ingrahamii 37 4625182 YP_944841.1 CDS Ping_3559 NC_008709.1 4377589 4378617 R KEGG: vpa:VPA0275 putative flagellin; histidinol phosphatase complement(4377589..4378617) Psychromonas ingrahamii 37 4625183 YP_944842.1 CDS Ping_3560 NC_008709.1 4378661 4379164 R hypothetical protein complement(4378661..4379164) Psychromonas ingrahamii 37 4625184 YP_944843.1 CDS Ping_3561 NC_008709.1 4379164 4380171 R PFAM: StbA family protein; KEGG: ppr:PBPRA0050 hypothetical StbA plasmid stable inheritance protein; StbA family protein complement(4379164..4380171) Psychromonas ingrahamii 37 4625185 YP_944844.1 CDS Ping_3562 NC_008709.1 4380175 4381485 R KEGG: vpa:VPA1533 putative flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; ATPase, FliI/YscN family protein complement(4380175..4381485) Psychromonas ingrahamii 37 4625186 YP_944845.1 CDS Ping_3563 NC_008709.1 4381485 4382162 R PFAM: flagellar assembly protein FliH; KEGG: ppr:PBPRA0024 hypothetical flagellar assembly protein; flagellar assembly protein FliH complement(4381485..4382162) Psychromonas ingrahamii 37 4625187 YP_944846.1 CDS fliG NC_008709.1 4382166 4383218 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(4382166..4383218) Psychromonas ingrahamii 37 4625188 YP_944847.1 CDS fliF NC_008709.1 4383228 4384976 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar MS-ring protein complement(4383228..4384976) Psychromonas ingrahamii 37 4625189 YP_944848.1 CDS Ping_3566 NC_008709.1 4384989 4385312 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: vpa:VPA1537 putative flagellar hook-basal body complex protein; flagellar hook-basal body complex subunit FliE complement(4384989..4385312) Psychromonas ingrahamii 37 4625190 YP_944849.1 CDS Ping_3567 NC_008709.1 4385479 4386366 R PFAM: OmpA/MotB domain protein; KEGG: vpa:VPA1539 putative sodium-type flagellar protein MotY precursor; OmpA/MotB domain-containing protein complement(4385479..4386366) Psychromonas ingrahamii 37 4625191 YP_944850.1 CDS Ping_3568 NC_008709.1 4386363 4387253 R TIGRFAM: flagellar hook-associated protein 3; KEGG: vpa:VPA0274 putative flagellar hook-associated protein; flagellar hook-associated protein 3 complement(4386363..4387253) Psychromonas ingrahamii 37 4625192 YP_944851.1 CDS Ping_3569 NC_008709.1 4387356 4388720 R TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: vpa:VPA0273 putative flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(4387356..4388720) Psychromonas ingrahamii 37 4625193 YP_944852.1 CDS Ping_3570 NC_008709.1 4388738 4389121 R KEGG: vpa:VPA0272 putative flagellar protein FlgJ; putative flagellar protein FlgJ complement(4388738..4389121) Psychromonas ingrahamii 37 4625194 YP_944853.1 CDS flgI NC_008709.1 4389133 4390239 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(4389133..4390239) Psychromonas ingrahamii 37 4625195 YP_944854.1 CDS flgH NC_008709.1 4390250 4390948 R part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein complement(4390250..4390948) Psychromonas ingrahamii 37 4625196 YP_944855.1 CDS Ping_3573 NC_008709.1 4390948 4391733 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: vpa:VPA0269 putative flagellar basal-body rod protein; flagellar basal-body rod protein FlgG complement(4390948..4391733) Psychromonas ingrahamii 37 4625159 YP_944856.1 CDS Ping_3574 NC_008709.1 4391738 4392469 R TIGRFAM: flagellar basal-body rod protein FlgF; KEGG: vpa:VPA0268 putative flagellar basal-body rod protein; flagellar basal-body rod protein FlgF complement(4391738..4392469) Psychromonas ingrahamii 37 4625160 YP_944857.1 CDS flgE NC_008709.1 4392480 4393676 R the hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar hook protein FlgE complement(4392480..4393676) Psychromonas ingrahamii 37 4625161 YP_944858.1 CDS flgD NC_008709.1 4393725 4394417 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production; flagellar basal body rod modification protein complement(4393725..4394417) Psychromonas ingrahamii 37 4625162 YP_944859.1 CDS Ping_3577 NC_008709.1 4394419 4394847 R TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: vpa:VPA0265 LfgC; flagellar basal-body rod protein FlgC complement(4394419..4394847) Psychromonas ingrahamii 37 4625163 YP_944860.1 CDS Ping_3578 NC_008709.1 4394850 4395203 R TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: vpa:VPA0264 LfgB; flagellar basal-body rod protein FlgB complement(4394850..4395203) Psychromonas ingrahamii 37 4625164 YP_944861.1 CDS Ping_3579 NC_008709.1 4395392 4396312 R PFAM: OmpA/MotB domain protein; KEGG: ppr:PBPRA0049 hypothetical chemotaxis LafU protein; OmpA/MotB domain-containing protein complement(4395392..4396312) Psychromonas ingrahamii 37 4625165 YP_944862.1 CDS Ping_3580 NC_008709.1 4396405 4397268 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: ypa:YPA_3044 putative flagellar motor transmembrane channel protein; MotA/TolQ/ExbB proton channel complement(4396405..4397268) Psychromonas ingrahamii 37 4625166 YP_944863.1 CDS Ping_3581 NC_008709.1 4397265 4397996 R PFAM: sigma-70 region 2 domain protein; KEGG: sdn:Sden_3633 RNA polymerase sigma factor, FliA/WhiG; sigma-28 (sigma F) factor complement(4397265..4397996) Psychromonas ingrahamii 37 4625167 YP_944864.1 CDS fliL NC_008709.1 4398007 4398453 R flagellar protein FliL complement(4398007..4398453) Psychromonas ingrahamii 37 4625168 YP_944865.1 CDS Ping_3583 NC_008709.1 4398472 4399476 R PFAM: flagellar hook-length control protein; KEGG: vpa:VPA1553 putative flagellar hook-length control protein FliK; flagellar hook-length control protein complement(4398472..4399476) Psychromonas ingrahamii 37 4625169 YP_944866.1 CDS Ping_3584 NC_008709.1 4399485 4399817 R hypothetical protein complement(4399485..4399817) Psychromonas ingrahamii 37 4625170 YP_944867.1 CDS Ping_3585 NC_008709.1 4399810 4400190 R TIGRFAM: flagellar protein FliS; KEGG: sdn:Sden_3637 flagellar protein FliS; flagellar protein FliS complement(4399810..4400190) Psychromonas ingrahamii 37 4625171 YP_944868.1 CDS Ping_3586 NC_008709.1 4400200 4401543 R PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: vpa:VPA1550 flagellar distal capping protein homolog LafB; flagellar hook-associated 2 domain-containing protein complement(4400200..4401543) Psychromonas ingrahamii 37 4625172 YP_944869.1 CDS Ping_3587 NC_008709.1 4401759 4402796 R PFAM: flagellin domain protein; KEGG: vpa:VPA1548 lateral flagellin LafA; flagellin domain-containing protein complement(4401759..4402796) Psychromonas ingrahamii 37 4625173 YP_944870.1 CDS Ping_3588 NC_008709.1 4403137 4404315 R PFAM: flagellin domain protein; KEGG: cvi:CV3011 flagellin D; flagellin domain-containing protein complement(4403137..4404315) Psychromonas ingrahamii 37 4625174 YP_944871.1 CDS Ping_3589 NC_008709.1 4404503 4405528 R PFAM: flagellin domain protein; KEGG: vpa:VPA1548 lateral flagellin LafA; flagellin domain-containing protein complement(4404503..4405528) Psychromonas ingrahamii 37 4625175 YP_944872.1 CDS Ping_3590 NC_008709.1 4405861 4406304 D hypothetical protein 4405861..4406304 Psychromonas ingrahamii 37 4625176 YP_944873.1 CDS Ping_3591 NC_008709.1 4406336 4407136 D hypothetical protein 4406336..4407136 Psychromonas ingrahamii 37 4625177 YP_944874.1 CDS Ping_3592 NC_008709.1 4407133 4407495 D PFAM: surface presentation of antigens (SPOA) protein; KEGG: zmo:ZMO0644 flagellar motor switch; surface presentation of antigens (SPOA) protein 4407133..4407495 Psychromonas ingrahamii 37 4625178 YP_944875.1 CDS fliP NC_008709.1 4407499 4408236 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4407499..4408236 Psychromonas ingrahamii 37 4625143 YP_944876.1 CDS Ping_3594 NC_008709.1 4408241 4408510 D TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: vpa:VPA1543 flagellar biosynthetic protein; flagellar biosynthetic protein FliQ 4408241..4408510 Psychromonas ingrahamii 37 4625144 YP_944877.1 CDS Ping_3595 NC_008709.1 4408513 4409292 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: vpa:VPA1544 putative flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 4408513..4409292 Psychromonas ingrahamii 37 4625145 YP_944878.1 CDS Ping_3596 NC_008709.1 4409289 4410413 D TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: vpa:VPA1545 flagellar biosynthetic protein; flagellar biosynthetic protein FlhB 4409289..4410413 Psychromonas ingrahamii 37 4625146 YP_944879.1 CDS Ping_3597 NC_008709.1 4410413 4412500 D PFAM: type III secretion FHIPEP protein; KEGG: vpa:VPA1546 flagellar biosynthesis protein; type III secretion FHIPEP protein 4410413..4412500 Psychromonas ingrahamii 37 4625147 YP_944880.1 CDS Ping_3598 NC_008709.1 4412602 4412910 D PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: vpa:VPA0262 putative negative regulator of flagellin synthesis FlgM; anti-sigma-28 factor FlgM 4412602..4412910 Psychromonas ingrahamii 37 4625148 YP_944881.1 CDS Ping_3599 NC_008709.1 4412903 4413313 D KEGG: vpa:VPA0261 putative flagella synthesis protein FlgN; ATPases involved in pili biogenesis, PilT 4412903..4413313 Psychromonas ingrahamii 37 4625149 YP_944882.1 CDS Ping_3600 NC_008709.1 4413794 4415548 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 4413794..4415548 Psychromonas ingrahamii 37 4625150 YP_944883.1 CDS Ping_3601 NC_008709.1 4415577 4416566 D PFAM: dehydrogenase, E1 component; KEGG: dps:DPPB38 probable pyruvate dehydrogenase, E1 component, alpha subunit; pyruvate dehydrogenase 4415577..4416566 Psychromonas ingrahamii 37 4625151 YP_944884.1 CDS Ping_3602 NC_008709.1 4416559 4417563 D PFAM: Transketolase, central region; Transketolase domain protein; KEGG: dps:DPPB39 probable pyruvate dehydrogenase, E1 component, beta subunit; Pyruvate dehydrogenase E1 component subunit beta 4416559..4417563 Psychromonas ingrahamii 37 4625152 YP_944885.1 CDS Ping_3603 NC_008709.1 4417560 4418915 D PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; KEGG: mmc:Mmcs_1093 catalytic domain of components of various dehydrogenase complexes; pyruvate dehydrogenase complex, E2 component dihydrolipoamide acetyltransferase 4417560..4418915 Psychromonas ingrahamii 37 4625153 YP_944886.1 CDS Ping_3604 NC_008709.1 4418982 4419224 D KEGG: mmc:Mmcs_1094 phosphopantetheine-binding protein; phosphopantetheine-binding protein 4418982..4419224 Psychromonas ingrahamii 37 4625154 YP_944887.1 CDS Ping_3605 NC_008709.1 4419589 4420704 D TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; alanine dehydrogenase/PNT domain protein; KEGG: pha:PSHAa1718 alanine dehydrogenase; alanine dehydrogenase 4419589..4420704 Psychromonas ingrahamii 37 4625155 YP_944888.1 CDS Ping_3606 NC_008709.1 4420745 4421212 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: vvy:VV1321 leucine-responsive regulatory protein; AsnC/Lrp family transcriptional regulator complement(4420745..4421212) Psychromonas ingrahamii 37 4625156 YP_944889.1 CDS Ping_3607 NC_008709.1 4421400 4423604 R PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: ppr:PBPRB1491 putative suppressor for copper-sensitivity B precursor; cytochrome c biogenesis protein, transmembrane region complement(4421400..4423604) Psychromonas ingrahamii 37 4625157 YP_944890.1 CDS Ping_3608 NC_008709.1 4424087 4424221 D PFAM: ribosomal protein L34; KEGG: pat:Patl_4315 ribosomal protein L34; 50S ribosomal protein L34 4424087..4424221 Psychromonas ingrahamii 37 4625158 YP_944891.1 CDS Ping_3609 NC_008709.1 4424232 4424588 D TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: vfi:VF0004 ribonuclease P protein component; ribonuclease P protein component 4424232..4424588 Psychromonas ingrahamii 37 4625123 YP_944892.1 CDS Ping_3610 NC_008709.1 4424576 4424815 D PFAM: protein of unknown function DUF37; KEGG: son:SO0005 conserved hypothetical protein TIGR00278; hypothetical protein 4424576..4424815 Psychromonas ingrahamii 37 4625124 YP_944893.1 CDS Ping_3611 NC_008709.1 4424835 4426535 D PFAM: 60 kDa inner membrane insertion protein; KEGG: ppr:PBPRA0003 putative inner membrane protein, 60 kDa; 60 kDa inner membrane insertion protein 4424835..4426535 Psychromonas ingrahamii 37 4625125 YP_944894.1 CDS Ping_3612 NC_008709.1 4426636 4428003 D TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Miro domain protein; KEGG: vpa:VP0002 thiophene and furan oxidation protein ThdF; tRNA modification GTPase TrmE 4426636..4428003 Psychromonas ingrahamii 37 4625126 YP_944895.1 CDS Ping_3613 NC_008709.1 4428245 4429177 D PFAM: porin, Gram-negative type; KEGG: vvu:VV20580 outer membrane protein; porin 4428245..4429177 Psychromonas ingrahamii 37 4625127 YP_944896.1 CDS Ping_3614 NC_008709.1 4430084 4430986 R PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: dps:DP2501 hypothetical protein; sugar nucleotide epimerase complement(4430084..4430986) Psychromonas ingrahamii 37 4625128 YP_944897.1 CDS Ping_3615 NC_008709.1 4431207 4431791 D TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: pae:PA0649 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase 4431207..4431791 Psychromonas ingrahamii 37 4625129 YP_944898.1 CDS Ping_3616 NC_008709.1 4431857 4433068 D TIGRFAM: acetylornithine and succinylornithine aminotransferases; PFAM: aminotransferase class-III; KEGG: pat:Patl_0651 acetylornithine and succinylornithine aminotransferases; acetylornithine and succinylornithine aminotransferase 4431857..4433068 Psychromonas ingrahamii 37 4625130 YP_944899.1 CDS glpX NC_008709.1 4433310 4434320 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 4433310..4434320 Psychromonas ingrahamii 37 4625131 YP_944900.1 CDS Ping_3618 NC_008709.1 4434763 4436169 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4737 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 4434763..4436169 Psychromonas ingrahamii 37 4625132 YP_944901.1 CDS Ping_3619 NC_008709.1 4436211 4437206 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 4436211..4437206 Psychromonas ingrahamii 37 4625133 YP_944902.1 CDS Ping_3620 NC_008709.1 4437249 4437857 D PFAM: DSBA oxidoreductase; KEGG: sdn:Sden_0285 DsbA oxidoreductase; thiol:disulfide interchange protein DsbA 4437249..4437857 Psychromonas ingrahamii 37 4625134 YP_944903.1 CDS Ping_3621 NC_008709.1 4438008 4438667 D KEGG: bce:BC3046 uridine kinase; uridine kinase 4438008..4438667 Psychromonas ingrahamii 37 4625135 YP_944904.1 CDS Ping_3622 NC_008709.1 4438645 4439613 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 4438645..4439613 Psychromonas ingrahamii 37 4625136 YP_944905.1 CDS Ping_3623 NC_008709.1 4439756 4440379 D KEGG: sbo:SBO_3729 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase 4439756..4440379 Psychromonas ingrahamii 37 4625137 YP_944906.1 CDS Ping_3624 NC_008709.1 4440470 4440745 D TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: eca:ECA0039 DNA-directed RNA polymerase omega chain; DNA-directed RNA polymerase subunit omega 4440470..4440745 Psychromonas ingrahamii 37 4625138 YP_944907.1 CDS Ping_3625 NC_008709.1 4441115 4442095 D TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: msu:MS1372 Ca2+/Na+ antiporter; Na+/Ca+ antiporter, CaCA family protein 4441115..4442095 Psychromonas ingrahamii 37 4625139 YP_944908.1 CDS Ping_3626 NC_008709.1 4442135 4442938 R KEGG: vfi:VF1388 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(4442135..4442938) Psychromonas ingrahamii 37 4625140 YP_944909.1 CDS Ping_3627 NC_008709.1 4443060 4443239 R PFAM: protein of unknown function DUF1289; KEGG: cps:CPS_0317 hypothetical protein; hypothetical protein complement(4443060..4443239) Psychromonas ingrahamii 37 4625141 YP_944910.1 CDS Ping_3628 NC_008709.1 4443341 4443697 D PFAM: glutaredoxin; KEGG: son:SO2797 hypothetical protein; glutaredoxin 4443341..4443697 Psychromonas ingrahamii 37 4625142 YP_944911.1 CDS Ping_3629 NC_008709.1 4443766 4445439 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: vch:VCA0644 NADH oxidase, putative; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4443766..4445439) Psychromonas ingrahamii 37 4624085 YP_944912.1 CDS Ping_3630 NC_008709.1 4445533 4445718 R KEGG: vch:VCA0643 hypothetical protein; hypothetical protein complement(4445533..4445718) Psychromonas ingrahamii 37 4624086 YP_944913.1 CDS Ping_3631 NC_008709.1 4445917 4446228 D PFAM: regulatory protein, ArsR; KEGG: vvy:VVA0901 predicted transcriptional regulator; ArsR family transcriptional regulator 4445917..4446228 Psychromonas ingrahamii 37 4624087 YP_944914.1 CDS Ping_3632 NC_008709.1 4446252 4446674 D PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: ppr:PBPRA1422 conserved hypothetical protein; hypothetical protein 4446252..4446674 Psychromonas ingrahamii 37 4624088 YP_944915.1 CDS Ping_3633 NC_008709.1 4446677 4447156 D PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: vpa:VPA0945 hypothetical protein; hypothetical protein 4446677..4447156 Psychromonas ingrahamii 37 4624089 YP_944916.1 CDS Ping_3634 NC_008709.1 4447211 4449355 R PFAM: permease; KEGG: sdn:Sden_0091 hypothetical protein; permease complement(4447211..4449355) Psychromonas ingrahamii 37 4624090 YP_944917.1 CDS Ping_3635 NC_008709.1 4449493 4450719 R PFAM: major facilitator superfamily MFS_1; KEGG: ppr:PBPRA2207 putative transporter; major facilitator superfamily transporter complement(4449493..4450719) Psychromonas ingrahamii 37 4624091 YP_944918.1 CDS Ping_3636 NC_008709.1 4450722 4451726 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase complement(4450722..4451726) Psychromonas ingrahamii 37 4624092 YP_944919.1 CDS Ping_3637 NC_008709.1 4451850 4452197 R PFAM: regulatory protein, ArsR; KEGG: pfo:Pfl_2400 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(4451850..4452197) Psychromonas ingrahamii 37 4624093 YP_944920.1 CDS Ping_3638 NC_008709.1 4452627 4453133 R KEGG: ppr:PBPRA2209 hypothetical phosphatase; phosphatase complement(4452627..4453133) Psychromonas ingrahamii 37 4624094 YP_944921.1 CDS Ping_3639 NC_008709.1 4453253 4454443 R PFAM: HemY domain protein; KEGG: ppr:PBPRA3531 hypothetical HemY protein; HemY domain-containing protein complement(4453253..4454443) Psychromonas ingrahamii 37 4624095 YP_944922.1 CDS hemX NC_008709.1 4454454 4455596 R PFAM: protein of unknown function DUF513, hemX; KEGG: yps:YPTB0182 putative uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase HemX complement(4454454..4455596) Psychromonas ingrahamii 37 4624096 YP_944923.1 CDS Ping_3641 NC_008709.1 4455661 4456395 R PFAM: Uroporphyrinogen III synthase HEM4; KEGG: ppr:PBPRA3529 hypothetical uroporphyrinogen III synthase; uroporphyrinogen III synthase HEM4 complement(4455661..4456395) Psychromonas ingrahamii 37 4624097 YP_944924.1 CDS Ping_3642 NC_008709.1 4456392 4457324 R KEGG: pha:PSHAa0098 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase complement(4456392..4457324) Psychromonas ingrahamii 37 4624098 YP_944925.1 CDS Ping_3643 NC_008709.1 4457619 4457864 R KEGG: cps:CPS_4821 hypothetical protein; hypothetical protein complement(4457619..4457864) Psychromonas ingrahamii 37 4624099 YP_944926.1 CDS Ping_3644 NC_008709.1 4457939 4459210 R KEGG: cps:CPS_2546 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(4457939..4459210) Psychromonas ingrahamii 37 4624100 YP_944927.1 CDS Ping_3645 NC_008709.1 4459460 4459984 D PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1265 hypothetical protein; N-acetyltransferase GCN5 4459460..4459984 Psychromonas ingrahamii 37 4624101 YP_944928.1 CDS Ping_3646 NC_008709.1 4460079 4460501 D KEGG: ilo:IL0758 hypothetical protein; hypothetical protein 4460079..4460501 Psychromonas ingrahamii 37 4624102 YP_944929.1 CDS Ping_3647 NC_008709.1 4460566 4461624 R PFAM: glycosyl transferase, family 9; KEGG: vfi:VFA1075 possible heptosyltransferase; glycosyl transferase family protein complement(4460566..4461624) Psychromonas ingrahamii 37 4624103 YP_944930.1 CDS Ping_3648 NC_008709.1 4461793 4462524 R PFAM: dihydrodipicolinate reductase; KEGG: lpn:lpg0131 dihydropicolinate reductase; dihydrodipicolinate reductase complement(4461793..4462524) Psychromonas ingrahamii 37 4624066 YP_944931.1 CDS Ping_3649 NC_008709.1 4462595 4462930 R KEGG: vvy:VV2496 hypothetical protein; hypothetical protein complement(4462595..4462930) Psychromonas ingrahamii 37 4624067 YP_944932.1 CDS Ping_3650 NC_008709.1 4463533 4463988 D PFAM: histidine triad (HIT) protein; KEGG: ftl:FTL_1398 conservered hypothetical protein; histidine triad (HIT) protein 4463533..4463988 Psychromonas ingrahamii 37 4624068 YP_944933.1 CDS Ping_3651 NC_008709.1 4463972 4464544 R PFAM: cobalamin synthesis protein, P47K; KEGG: pat:Patl_2908 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K complement(4463972..4464544) Psychromonas ingrahamii 37 4624069 YP_944934.1 CDS Ping_3652 NC_008709.1 4464703 4465566 D PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: ppr:PBPRA0197 hypothetical protein; hypothetical protein 4464703..4465566 Psychromonas ingrahamii 37 4624070 YP_944935.1 CDS Ping_3653 NC_008709.1 4466095 4466460 D PFAM: protein of unknown function DUF469; KEGG: vfi:VF1139 hypothetical protein; hypothetical protein 4466095..4466460 Psychromonas ingrahamii 37 4624071 YP_944936.1 CDS Ping_3654 NC_008709.1 4466826 4467749 R KEGG: pfo:Pfl_5296 acyl transferase region; acyl transferase domain-containing protein complement(4466826..4467749) Psychromonas ingrahamii 37 4624072 YP_944937.1 CDS Ping_3655 NC_008709.1 4467768 4468397 R Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase complement(4467768..4468397) Psychromonas ingrahamii 37 4624073 YP_944938.1 CDS Ping_3656 NC_008709.1 4468474 4469268 R PFAM: malonate decarboxylase gamma subunit; KEGG: mdcE; malonate decarboxylase, gamma subunit; malonate decarboxylase subunit gamma complement(4468474..4469268) Psychromonas ingrahamii 37 4624074 YP_944939.1 CDS Ping_3657 NC_008709.1 4469268 4470410 R KEGG: reu:Reut_B4928 malonate decarboxylase, beta subunit; acetyl-CoA carboxylase subunit beta complement(4469268..4470410) Psychromonas ingrahamii 37 4624075 YP_944940.1 CDS Ping_3658 NC_008709.1 4470397 4471275 R PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: pfo:Pfl_5301 triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase complement(4470397..4471275) Psychromonas ingrahamii 37 4624076 YP_944941.1 CDS Ping_3659 NC_008709.1 4471278 4472933 R KEGG: pae:PA0208 malonate decarboxylase alpha subunit; malonate decarboxylase subunit alpha complement(4471278..4472933) Psychromonas ingrahamii 37 4624077 YP_944942.1 CDS Ping_3660 NC_008709.1 4473177 4474097 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: psp:PSPPH_0442 malonate utilization transcriptional regulator; LysR family transcriptional regulator 4473177..4474097 Psychromonas ingrahamii 37 4624078 YP_944943.1 CDS Ping_3661 NC_008709.1 4474449 4475021 D PFAM: NUDIX hydrolase; KEGG: wsu:WS0265 hypothetical protein; UDP-sugar diphosphatase 4474449..4475021 Psychromonas ingrahamii 37 4624079 YP_944944.1 CDS Ping_3662 NC_008709.1 4475218 4476168 R KEGG: tcx:Tcr_2088 amidohydrolase-like; metal-dependent hydrolase complement(4475218..4476168) Psychromonas ingrahamii 37 4624080 YP_944945.1 CDS Ping_3663 NC_008709.1 4476542 4477477 D 3-isopropylmalate dehydrogenase 4476542..4477477 Psychromonas ingrahamii 37 4624081 YP_944946.1 CDS Ping_3664 NC_008709.1 4477685 4478029 D hypothetical protein 4477685..4478029 Psychromonas ingrahamii 37 4624082 YP_944947.1 CDS Ping_3665 NC_008709.1 4479349 4479621 D hypothetical protein 4479349..4479621 Psychromonas ingrahamii 37 4624083 YP_944948.1 CDS Ping_3667 NC_008709.1 4480454 4481098 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rfr:Rfer_1839 transcriptional regulator, GntR family; transcriptional regulator complement(4480454..4481098) Psychromonas ingrahamii 37 4623501 YP_944949.1 CDS Ping_3668 NC_008709.1 4481273 4482076 R PFAM: Integrase, catalytic region; KEGG: sdn:Sden_3021 integrase, catalytic region; integrase catalytic subunit complement(4481273..4482076) Psychromonas ingrahamii 37 4623502 YP_944950.1 CDS Ping_3669 NC_008709.1 4482142 4482447 R PFAM: transposase IS3/IS911 family protein; KEGG: son:SOA0146 ISSod1, transposase OrfA; transposase IS3/IS911 family protein complement(4482142..4482447) Psychromonas ingrahamii 37 4623503 YP_944951.1 CDS Ping_3671 NC_008709.1 4483433 4483879 D PFAM: transposase IS200-family protein; KEGG: hma:rrnAC0815 probable transposase; transposase IS200-family protein 4483433..4483879 Psychromonas ingrahamii 37 4623505 YP_944952.1 CDS Ping_3672 NC_008709.1 4484121 4484885 R PFAM: Asp/Glu racemase; KEGG: pol:Bpro_2119 Asp/Glu racemase; maleate cis-trans isomerase complement(4484121..4484885) Psychromonas ingrahamii 37 4623506 YP_944953.1 CDS Ping_3673 NC_008709.1 4484915 4486231 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rde:RD1_1476 TrapT family, DctM subunit, putative; TRAP dicarboxylate transporter subunit DctM complement(4484915..4486231) Psychromonas ingrahamii 37 4623507 YP_944954.1 CDS Ping_3674 NC_008709.1 4486231 4486815 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rde:RD1_1477 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ complement(4486231..4486815) Psychromonas ingrahamii 37 4623508 YP_944955.1 CDS Ping_3675 NC_008709.1 4486890 4487882 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rde:RD1_1478 C4-dicarboxylate transport system C4-dicarboxylate-binding protein, putative; TRAP dicarboxylate transporter subunit DctP complement(4486890..4487882) Psychromonas ingrahamii 37 4623509 YP_944956.1 CDS Ping_3677 NC_008709.1 4490300 4491103 D PFAM: protein of unknown function DUF81; KEGG: eba:ebA1817 hypothetical protein; hypothetical protein 4490300..4491103 Psychromonas ingrahamii 37 4623511 YP_944957.1 CDS Ping_3681 NC_008709.1 4492245 4492766 D KEGG: son:SO2875 ISSod10, transposase OrfB; ISSod10, transposase OrfB 4492245..4492766 Psychromonas ingrahamii 37 4623515 YP_944958.1 CDS Ping_3682 NC_008709.1 4493040 4493612 D PFAM: NUDIX hydrolase; KEGG: wsu:WS0265 hypothetical protein; UDP-sugar diphosphatase 4493040..4493612 Psychromonas ingrahamii 37 4623482 YP_944959.1 CDS Ping_3683 NC_008709.1 4493861 4494733 R KEGG: tcx:Tcr_2091 hypothetical protein; hypothetical protein complement(4493861..4494733) Psychromonas ingrahamii 37 4623483 YP_944960.1 CDS phnP NC_008709.1 4494733 4495500 R required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein complement(4494733..4495500) Psychromonas ingrahamii 37 4623484 YP_944961.1 CDS Ping_3685 NC_008709.1 4495497 4496087 R TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: tcx:Tcr_2089 guanylate kinase/L-type calcium channel region; phosphonate metabolism protein/1,5-bisphosphokinase PhnN complement(4495497..4496087) Psychromonas ingrahamii 37 4623485 YP_944962.1 CDS Ping_3686 NC_008709.1 4496080 4497243 R TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: tcx:Tcr_2088 amidohydrolase-like; phosphonate metabolism protein PhnM complement(4496080..4497243) Psychromonas ingrahamii 37 4623486 YP_944963.1 CDS Ping_3687 NC_008709.1 4497246 4497983 R KEGG: tcx:Tcr_2087 ABC transporter related; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; ABC phosphonate transporter ATP-binding protein complement(4497246..4497983) Psychromonas ingrahamii 37 4623487 YP_944964.1 CDS Ping_3688 NC_008709.1 4497998 4498834 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tcx:Tcr_2086 ABC transporter related; phosphonate ABC transporter ATP-binding protein complement(4497998..4498834) Psychromonas ingrahamii 37 4623488 YP_944965.1 CDS Ping_3689 NC_008709.1 4498824 4499750 R PFAM: phosphonate metabolism PhnJ; KEGG: tcx:Tcr_2085 phosphonate metabolism PhnJ; phosphonate metabolism PhnJ complement(4498824..4499750) Psychromonas ingrahamii 37 4623489 YP_944966.1 CDS Ping_3690 NC_008709.1 4499743 4500867 R PFAM: phosphonate metabolism; KEGG: tcx:Tcr_2084 phosphonate metabolism; phosphonate metabolism protein complement(4499743..4500867) Psychromonas ingrahamii 37 4623490 YP_944967.1 CDS phnH NC_008709.1 4500867 4501475 R PFAM: phosphonate metabolism; KEGG: tcx:Tcr_2083 phosphonate metabolism protein; carbon-phosphorus lyase complex subunit complement(4500867..4501475) Psychromonas ingrahamii 37 4623491 YP_944968.1 CDS Ping_3692 NC_008709.1 4501468 4501953 R KEGG: tcx:Tcr_2082 putative PhnG protein; putative PhnG protein complement(4501468..4501953) Psychromonas ingrahamii 37 4623492 YP_944969.1 CDS Ping_3693 NC_008709.1 4501966 4502973 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tcx:Tcr_2081 phosphonate uptake transporter; ABC phosphonate transporter inner membrane protein complement(4501966..4502973) Psychromonas ingrahamii 37 4623493 YP_944970.1 CDS Ping_3694 NC_008709.1 4502970 4503794 R KEGG: tcx:Tcr_2080 ABC transporter related; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC phosphonate transporter ATP-binding protein complement(4502970..4503794) Psychromonas ingrahamii 37 4623494 YP_944971.1 CDS Ping_3695 NC_008709.1 4503914 4504831 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: tcx:Tcr_2079 phosphonate-binding periplasmic protein; ABC phosphonate transporter periplasmic phosphonate-binding protein complement(4503914..4504831) Psychromonas ingrahamii 37 4623495 YP_944972.1 CDS Ping_3696 NC_008709.1 4504954 4505676 R TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: tcx:Tcr_2078 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(4504954..4505676) Psychromonas ingrahamii 37 4623496 YP_944973.1 CDS Ping_3697 NC_008709.1 4506146 4507036 R TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: vfi:VFA0850 chloramphenicol-sensitive protein RarD; transporter DMT superfamily protein complement(4506146..4507036) Psychromonas ingrahamii 37 4623497 YP_944974.1 CDS Ping_3698 NC_008709.1 4507037 4507336 R hypothetical protein complement(4507037..4507336) Psychromonas ingrahamii 37 4623498 YP_944975.1 CDS Ping_3700 NC_008709.1 4507901 4508509 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: bur:Bcep18194_B2439 glutathione S-transferase-like; glutathione S-transferase complement(4507901..4508509) Psychromonas ingrahamii 37 4623500 YP_944976.1 CDS Ping_3701 NC_008709.1 4508580 4509200 D PFAM: regulatory protein, TetR; KEGG: pae:PA3034 probable transcriptional regulator; TetR family transcriptional regulator 4508580..4509200 Psychromonas ingrahamii 37 4623381 YP_944977.1 CDS Ping_3702 NC_008709.1 4509784 4511130 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1-like repeat; Sel1-like repeat-containing serine/threonine protein kinase 4509784..4511130 Psychromonas ingrahamii 37 4623382 YP_944978.1 CDS Ping_3703 NC_008709.1 4511435 4511935 R hypothetical protein complement(4511435..4511935) Psychromonas ingrahamii 37 4623383 YP_944979.1 CDS Ping_3704 NC_008709.1 4512776 4512985 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: sde:Sde_3558 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 4512776..4512985 Psychromonas ingrahamii 37 4623384 YP_944980.1 CDS Ping_3706 NC_008709.1 4513871 4514209 D PFAM: Thioredoxin domain; KEGG: ilo:IL2069 thioredoxin related protein; thioredoxin domain-containing protein 4513871..4514209 Psychromonas ingrahamii 37 4623386 YP_944981.1 CDS Ping_3707 NC_008709.1 4514533 4514856 D hypothetical protein 4514533..4514856 Psychromonas ingrahamii 37 4623387 YP_944982.1 CDS Ping_3708 NC_008709.1 4514957 4516156 R PFAM: protein of unknown function DUF214; KEGG: eba:ebA4058 putative ABC transporter protein; ABC transporter permease complement(4514957..4516156) Psychromonas ingrahamii 37 4623388 YP_944983.1 CDS Ping_3709 NC_008709.1 4516160 4517374 R PFAM: protein of unknown function DUF214; KEGG: dar:Daro_3463 protein of unknown function DUF214; ABC transporter permease complement(4516160..4517374) Psychromonas ingrahamii 37 4623389 YP_944984.1 CDS Ping_3710 NC_008709.1 4517371 4518060 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_3462 ABC transporter related; amino acid ABC transporter ATP-binding protein complement(4517371..4518060) Psychromonas ingrahamii 37 4623390 YP_944985.1 CDS Ping_3711 NC_008709.1 4518068 4519219 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA4062 HlyD family secretion protein; RND family efflux transporter MFP subunit complement(4518068..4519219) Psychromonas ingrahamii 37 4623391 YP_944986.1 CDS Ping_3712 NC_008709.1 4520098 4521081 D KEGG: sec:SC2750 putative glycoporin; putative glycoporin 4520098..4521081 Psychromonas ingrahamii 37 4623392 YP_944987.1 CDS Ping_3713 NC_008709.1 4521951 4523681 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO2286 sulfate permease family protein; sulfate transporter 4521951..4523681 Psychromonas ingrahamii 37 4623393 YP_944988.1 CDS Ping_3714 NC_008709.1 4524210 4525586 D KEGG: ssn:SSO_3652 DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator, DnaA C-terminal domain; Chromosomal replication initiator, DnaA; SMART: AAA ATPase; chromosomal replication initiator protein DnaA 4524210..4525586 Psychromonas ingrahamii 37 4623394 YP_944989.1 CDS Ping_3715 NC_008709.1 4525767 4526870 D KEGG: sdy:SDY_4183 DNA polymerase III, beta-subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 4525767..4526870 Psychromonas ingrahamii 37 4623395 YP_944990.1 CDS Ping_3716 NC_008709.1 4526929 4528008 D TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: hdu:HD0849 DNA replication and repair protein RecF; DNA replication and repair protein RecF 4526929..4528008 Psychromonas ingrahamii 37 4623379 YP_944991.1 CDS Ping_3717 NC_008709.1 4528020 4530449 D KEGG: vvy:VV0014 DNA gyrase, subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 4528020..4530449 Psychromonas ingrahamii 37 4623380 YP_944992.1 CDS Ping_3719 NC_008709.1 4531796 4535632 D PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: vvy:VVA0933 signal transduction histidine kinase; sensor histidine kinase 4531796..4535632 Psychromonas ingrahamii 37 4624868 YP_944993.1 CDS Ping_3720 NC_008709.1 4535629 4536474 D PFAM: MCP methyltransferase, CheR-type; KEGG: abo:ABO_1308 chemotaxis protein methyltransferase; CheR-type protein glutamate methyltransferase 4535629..4536474 Psychromonas ingrahamii 37 4624869 YP_944994.1 CDS Ping_3721 NC_008709.1 4536594 4537181 D PFAM: CheB methylesterase; KEGG: ana:all1847 similar to protein-glutamate methylesterase; CheB-type protein glutamate methylesterase 4536594..4537181 Psychromonas ingrahamii 37 4624870 YP_944995.1 CDS Ping_3722 NC_008709.1 4537377 4539560 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold domain protein; KEGG: tbd:Tbd_0085 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and response regulator receiver modulation; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 4537377..4539560 Psychromonas ingrahamii 37 4624871 YP_944996.1 CDS Ping_3723 NC_008709.1 4540004 4540333 R PFAM: branched-chain amino acid transport; KEGG: mac:MA3438 branched chain amino acid transport protein AzlD; branched-chain amino acid transport complement(4540004..4540333) Psychromonas ingrahamii 37 4624872 YP_944997.1 CDS Ping_3724 NC_008709.1 4540427 4541134 R PFAM: AzlC family protein; KEGG: mba:Mbar_A2616 hypothetical protein; AzlC family protein complement(4540427..4541134) Psychromonas ingrahamii 37 4624873 YP_944998.1 CDS avtA NC_008709.1 4541311 4542564 R transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase complement(4541311..4542564) Psychromonas ingrahamii 37 4624874 YP_944999.1 CDS Ping_3726 NC_008709.1 4542763 4544829 R KEGG: vpa:VP0021 glycyl-tRNA synthetase, beta chain; glycyl-tRNA synthetase subunit beta complement(4542763..4544829) Psychromonas ingrahamii 37 4624875 YP_945000.1 CDS glyQ NC_008709.1 4544841 4545749 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(4544841..4545749) Psychromonas ingrahamii 37 4624876 YP_945001.1 CDS Ping_3728 NC_008709.1 4546093 4546785 D KEGG: sil:SPO3144 hypothetical protein; hypothetical protein 4546093..4546785 Psychromonas ingrahamii 37 4624877 YP_945002.1 CDS Ping_3729 NC_008709.1 4546837 4547256 R TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG: sdy:SDY_4017 membrane-bound ATP synthase, F1 sector, epsilon-subunit; ATP synthase F1 subunit epsilon complement(4546837..4547256) Psychromonas ingrahamii 37 4624878 YP_945003.1 CDS Ping_3730 NC_008709.1 4547272 4548669 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(4547272..4548669) Psychromonas ingrahamii 37 4624879 YP_945004.1 CDS Ping_3731 NC_008709.1 4548699 4549565 R KEGG: vfi:VF2565 ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+-transporting two-sector ATPase, gamma subunit; ATP synthase F1 subunit gamma complement(4548699..4549565) Psychromonas ingrahamii 37 4624880 YP_945005.1 CDS Ping_3732 NC_008709.1 4549615 4551156 R KEGG: ppr:PBPRA3606 putative AtpA, ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; ATP synthase F1 subunit alpha complement(4549615..4551156) Psychromonas ingrahamii 37 4624881 YP_945006.1 CDS Ping_3733 NC_008709.1 4551169 4551702 R TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+-transporting two-sector ATPase, delta (OSCP) subunit; KEGG: vch:VC2767 ATP synthase F1, delta subunit; ATP synthase F1 subunit delta complement(4551169..4551702) Psychromonas ingrahamii 37 4624822 YP_945007.1 CDS Ping_3734 NC_008709.1 4551714 4552184 R TIGRFAM: ATP synthase F0, B subunit; PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: eca:ECA4516 ATP synthase B chain; ATP synthase F0 subunit B complement(4551714..4552184) Psychromonas ingrahamii 37 4624823 YP_945008.1 CDS Ping_3735 NC_008709.1 4552223 4552480 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(4552223..4552480) Psychromonas ingrahamii 37 4624824 YP_945009.1 CDS Ping_3736 NC_008709.1 4552528 4553331 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(4552528..4553331) Psychromonas ingrahamii 37 4624825 YP_945010.1 CDS Ping_3737 NC_008709.1 4553339 4553743 R PFAM: ATP synthase I chain; KEGG: ilo:IL2626 F0F1-type ATP synthase, subunit I; ATP synthase I chain complement(4553339..4553743) Psychromonas ingrahamii 37 4624826 YP_945011.1 CDS Ping_3738 NC_008709.1 4553907 4554824 R TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: sdn:Sden_3760 ParB-like partition proteins; parB-like partition protein complement(4553907..4554824) Psychromonas ingrahamii 37 4624827 YP_945012.1 CDS Ping_3739 NC_008709.1 4554858 4555631 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO4756 ParA family protein; cobyrinic acid a,c-diamide synthase complement(4554858..4555631) Psychromonas ingrahamii 37 4624828 YP_945013.1 CDS gidB NC_008709.1 4555745 4556368 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(4555745..4556368) Psychromonas ingrahamii 37 4624829 YP_945014.1 CDS Ping_3741 NC_008709.1 4556369 4558258 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(4556369..4558258) Psychromonas ingrahamii 37 4624830 YP_945015.1 CDS Ping_3742 NC_008709.1 4558631 4559086 R PFAM: flavodoxin/nitric oxide synthase; KEGG: plu:plu0050 protein mioC, involved in modulation of initiation at oriC, initiation of chromosome replication; flavodoxin/nitric oxide synthase complement(4558631..4559086) Psychromonas ingrahamii 37 4624831 Ping_R0002 tRNA Ping_R0002 NC_008709.1 1822 1898 D tRNA-Ile 1822..1898 Psychromonas ingrahamii 37 4625973 Ping_R0003 tRNA Ping_R0003 NC_008709.1 1949 2024 D tRNA-Ala 1949..2024 Psychromonas ingrahamii 37 4625974 Ping_R0007 tRNA Ping_R0007 NC_008709.1 93088 93163 D tRNA-Glu 93088..93163 Psychromonas ingrahamii 37 4624467 Ping_R0010 tRNA Ping_R0010 NC_008709.1 275625 275700 D tRNA-Thr 275625..275700 Psychromonas ingrahamii 37 4627159 Ping_R0011 tRNA Ping_R0011 NC_008709.1 275711 275794 D tRNA-Tyr 275711..275794 Psychromonas ingrahamii 37 4627160 Ping_R0012 tRNA Ping_R0012 NC_008709.1 275906 275980 D tRNA-Gly 275906..275980 Psychromonas ingrahamii 37 4627161 Ping_R0014 tRNA Ping_R0014 NC_008709.1 298420 298496 D tRNA-Ile 298420..298496 Psychromonas ingrahamii 37 4625795 Ping_R0015 tRNA Ping_R0015 NC_008709.1 298547 298622 D tRNA-Ala 298547..298622 Psychromonas ingrahamii 37 4625796 Ping_R0018 tRNA Ping_R0018 NC_008709.1 302550 302625 D tRNA-Thr 302550..302625 Psychromonas ingrahamii 37 4625799 Ping_R0019 tRNA Ping_R0019 NC_008709.1 409144 409220 R tRNA-Met complement(409144..409220) Psychromonas ingrahamii 37 4624887 Ping_R0020 tRNA Ping_R0020 NC_008709.1 481020 481095 R tRNA-Phe complement(481020..481095) Psychromonas ingrahamii 37 4624178 Ping_R0021 tRNA Ping_R0021 NC_008709.1 481150 481225 R tRNA-Thr complement(481150..481225) Psychromonas ingrahamii 37 4624179 Ping_R0022 tRNA Ping_R0022 NC_008709.1 481307 481382 R tRNA-Phe complement(481307..481382) Psychromonas ingrahamii 37 4624180 Ping_R0023 tRNA Ping_R0023 NC_008709.1 507130 507214 D tRNA-Leu 507130..507214 Psychromonas ingrahamii 37 4624299 Ping_R0024 tRNA Ping_R0024 NC_008709.1 629300 629376 R tRNA-Asp complement(629300..629376) Psychromonas ingrahamii 37 4623396 Ping_R0025 tRNA Ping_R0025 NC_008709.1 629459 629535 R tRNA-Asp complement(629459..629535) Psychromonas ingrahamii 37 4623397 Ping_R0026 tRNA Ping_R0026 NC_008709.1 629795 629871 R tRNA-Asp complement(629795..629871) Psychromonas ingrahamii 37 4623398 Ping_R0027 tRNA Ping_R0027 NC_008709.1 629980 630056 R tRNA-Asp complement(629980..630056) Psychromonas ingrahamii 37 4623399 Ping_R0028 tRNA Ping_R0028 NC_008709.1 630198 630274 R tRNA-Asp complement(630198..630274) Psychromonas ingrahamii 37 4623400 Ping_R0029 tRNA Ping_R0029 NC_008709.1 646011 646086 D tRNA-Trp 646011..646086 Psychromonas ingrahamii 37 4623434 Ping_R0031 tRNA Ping_R0031 NC_008709.1 742633 742709 D tRNA-Ile 742633..742709 Psychromonas ingrahamii 37 4623947 Ping_R0032 tRNA Ping_R0032 NC_008709.1 742760 742835 D tRNA-Ala 742760..742835 Psychromonas ingrahamii 37 4623948 Ping_R0035 tRNA Ping_R0035 NC_008709.1 922914 922989 D tRNA-Lys 922914..922989 Psychromonas ingrahamii 37 4624922 Ping_R0036 tRNA Ping_R0036 NC_008709.1 923154 923229 D tRNA-Lys 923154..923229 Psychromonas ingrahamii 37 4624923 Ping_R0037 tRNA Ping_R0037 NC_008709.1 923325 923400 D tRNA-Lys 923325..923400 Psychromonas ingrahamii 37 4624924 Ping_R0038 tRNA Ping_R0038 NC_008709.1 923510 923585 D tRNA-Lys 923510..923585 Psychromonas ingrahamii 37 4624925 Ping_R0039 tRNA Ping_R0039 NC_008709.1 923681 923756 D tRNA-Lys 923681..923756 Psychromonas ingrahamii 37 4624926 Ping_R0040 tRNA Ping_R0040 NC_008709.1 1017902 1017986 D tRNA-Leu 1017902..1017986 Psychromonas ingrahamii 37 4623913 Ping_R0043 tRNA Ping_R0043 NC_008709.1 1035169 1035244 D tRNA-Glu 1035169..1035244 Psychromonas ingrahamii 37 4625853 Ping_R0046 tRNA Ping_R0046 NC_008709.1 1110422 1110497 R tRNA-Arg complement(1110422..1110497) Psychromonas ingrahamii 37 4625224 Ping_R0047 tRNA Ping_R0047 NC_008709.1 1180465 1180540 D tRNA-Asn 1180465..1180540 Psychromonas ingrahamii 37 4626770 Ping_R0048 tRNA Ping_R0048 NC_008709.1 1180819 1180894 D tRNA-Asn 1180819..1180894 Psychromonas ingrahamii 37 4626771 Ping_R0049 tRNA Ping_R0049 NC_008709.1 1181095 1181170 D tRNA-Asn 1181095..1181170 Psychromonas ingrahamii 37 4626772 Ping_R0050 tRNA Ping_R0050 NC_008709.1 1181425 1181500 D tRNA-Asn 1181425..1181500 Psychromonas ingrahamii 37 4626773 Ping_R0051 tRNA Ping_R0051 NC_008709.1 1182466 1182542 D tRNA-Met 1182466..1182542 Psychromonas ingrahamii 37 4626774 Ping_R0052 tRNA Ping_R0052 NC_008709.1 1182588 1182664 D tRNA-Met 1182588..1182664 Psychromonas ingrahamii 37 4626775 Ping_R0053 tRNA Ping_R0053 NC_008709.1 1182710 1182786 D tRNA-Met 1182710..1182786 Psychromonas ingrahamii 37 4626776 Ping_R0054 tRNA Ping_R0054 NC_008709.1 1182832 1182908 D tRNA-Met 1182832..1182908 Psychromonas ingrahamii 37 4626777 Ping_R0055 tRNA Ping_R0055 NC_008709.1 1182954 1183030 D tRNA-Met 1182954..1183030 Psychromonas ingrahamii 37 4626778 Ping_R0056 tRNA Ping_R0056 NC_008709.1 1183076 1183152 D tRNA-Met 1183076..1183152 Psychromonas ingrahamii 37 4626779 Ping_R0057 tRNA Ping_R0057 NC_008709.1 1183198 1183274 D tRNA-Met 1183198..1183274 Psychromonas ingrahamii 37 4626780 Ping_R0059 tRNA Ping_R0059 NC_008709.1 1194430 1194505 D tRNA-Glu 1194430..1194505 Psychromonas ingrahamii 37 4626663 Ping_R0062 tRNA Ping_R0062 NC_008709.1 1375887 1375970 R tRNA-Tyr complement(1375887..1375970) Psychromonas ingrahamii 37 4626231 Ping_R0064 tRNA Ping_R0064 NC_008709.1 1484301 1484391 D tRNA-Ser 1484301..1484391 Psychromonas ingrahamii 37 4623589 Ping_R0065 tRNA Ping_R0065 NC_008709.1 1484810 1484900 D tRNA-Ser 1484810..1484900 Psychromonas ingrahamii 37 4623590 Ping_R0066 tRNA Ping_R0066 NC_008709.1 1488721 1488796 D tRNA-Gly 1488721..1488796 Psychromonas ingrahamii 37 4623594 Ping_R0067 tRNA Ping_R0067 NC_008709.1 1488812 1488885 D tRNA-Cys 1488812..1488885 Psychromonas ingrahamii 37 4623595 Ping_R0068 tRNA Ping_R0068 NC_008709.1 1488900 1488985 D tRNA-Leu 1488900..1488985 Psychromonas ingrahamii 37 4623596 Ping_R0069 tRNA Ping_R0069 NC_008709.1 1611957 1612033 R tRNA-Met complement(1611957..1612033) Psychromonas ingrahamii 37 4625320 Ping_R0070 tRNA Ping_R0070 NC_008709.1 1612152 1612236 R tRNA-Leu complement(1612152..1612236) Psychromonas ingrahamii 37 4625321 Ping_R0071 tRNA Ping_R0071 NC_008709.1 1612244 1612318 R tRNA-Gln complement(1612244..1612318) Psychromonas ingrahamii 37 4625322 Ping_R0072 tRNA Ping_R0072 NC_008709.1 1612455 1612529 R tRNA-Gln complement(1612455..1612529) Psychromonas ingrahamii 37 4625323 Ping_R0073 tRNA Ping_R0073 NC_008709.1 1612584 1612668 R tRNA-Leu complement(1612584..1612668) Psychromonas ingrahamii 37 4625324 Ping_R0074 tRNA Ping_R0074 NC_008709.1 1612774 1612850 R tRNA-Met complement(1612774..1612850) Psychromonas ingrahamii 37 4625833 Ping_R0076 tRNA Ping_R0076 NC_008709.1 1981065 1981140 R tRNA-Ala complement(1981065..1981140) Psychromonas ingrahamii 37 4623612 Ping_R0077 tRNA Ping_R0077 NC_008709.1 1982968 1983043 D tRNA-Val 1982968..1983043 Psychromonas ingrahamii 37 4623614 Ping_R0078 tRNA Ping_R0078 NC_008709.1 1983149 1983224 D tRNA-Val 1983149..1983224 Psychromonas ingrahamii 37 4623615 Ping_R0079 tRNA Ping_R0079 NC_008709.1 1983330 1983405 D tRNA-Val 1983330..1983405 Psychromonas ingrahamii 37 4623616 Ping_R0080 tRNA Ping_R0080 NC_008709.1 1983568 1983643 D tRNA-Val 1983568..1983643 Psychromonas ingrahamii 37 4623617 Ping_R0081 tRNA Ping_R0081 NC_008709.1 1983804 1983879 D tRNA-Val 1983804..1983879 Psychromonas ingrahamii 37 4623618 Ping_R0082 tRNA Ping_R0082 NC_008709.1 1984042 1984117 D tRNA-Val 1984042..1984117 Psychromonas ingrahamii 37 4623619 Ping_R0083 tRNA Ping_R0083 NC_008709.1 1984280 1984355 D tRNA-Val 1984280..1984355 Psychromonas ingrahamii 37 4623620 Ping_R0085 tRNA Ping_R0085 NC_008709.1 2727441 2727526 R tRNA-Leu complement(2727441..2727526) Psychromonas ingrahamii 37 4623451 Ping_R0086 tRNA Ping_R0086 NC_008709.1 2727851 2727936 R tRNA-Leu complement(2727851..2727936) Psychromonas ingrahamii 37 4623452 Ping_R0087 tRNA Ping_R0087 NC_008709.1 2756289 2756379 R tRNA-Ser complement(2756289..2756379) Psychromonas ingrahamii 37 4627199 Ping_R0088 tRNA Ping_R0088 NC_008709.1 2870119 2870206 R tRNA-Ser complement(2870119..2870206) Psychromonas ingrahamii 37 4623565 Ping_R0092 tRNA Ping_R0092 NC_008709.1 3013781 3013856 D tRNA-Val 3013781..3013856 Psychromonas ingrahamii 37 4627145 Ping_R0093 tRNA Ping_R0093 NC_008709.1 3122070 3122146 R tRNA-Pro complement(3122070..3122146) Psychromonas ingrahamii 37 4624198 Ping_R0094 tRNA Ping_R0094 NC_008709.1 3122307 3122391 R tRNA-Leu complement(3122307..3122391) Psychromonas ingrahamii 37 4624199 Ping_R0095 tRNA Ping_R0095 NC_008709.1 3122422 3122497 R tRNA-His complement(3122422..3122497) Psychromonas ingrahamii 37 4624200 Ping_R0096 tRNA Ping_R0096 NC_008709.1 3170682 3170758 R tRNA-Arg complement(3170682..3170758) Psychromonas ingrahamii 37 4624275 Ping_R0097 tRNA Ping_R0097 NC_008709.1 3171323 3171399 R tRNA-Pro complement(3171323..3171399) Psychromonas ingrahamii 37 4624276 Ping_R0098 tRNA Ping_R0098 NC_008709.1 3174236 3174312 R tRNA-Pro complement(3174236..3174312) Psychromonas ingrahamii 37 4624278 Ping_R0099 tRNA Ping_R0099 NC_008709.1 3227380 3227466 D tRNA-Leu 3227380..3227466 Psychromonas ingrahamii 37 4624339 Ping_R0100 tRNA Ping_R0100 NC_008709.1 3255405 3255480 D tRNA-OTHER 3255405..3255480 Psychromonas ingrahamii 37 4625274 Ping_R0106 tRNA Ping_R0106 NC_008709.1 3948158 3948233 R tRNA-Glu complement(3948158..3948233) Psychromonas ingrahamii 37 4624803 Ping_R0111 tRNA Ping_R0111 NC_008709.1 4122509 4122584 R tRNA-Gly complement(4122509..4122584) Psychromonas ingrahamii 37 4625711 Ping_R0112 tRNA Ping_R0112 NC_008709.1 4122618 4122693 R tRNA-Gly complement(4122618..4122693) Psychromonas ingrahamii 37 4625712 Ping_R0113 tRNA Ping_R0113 NC_008709.1 4122737 4122812 R tRNA-Gly complement(4122737..4122812) Psychromonas ingrahamii 37 4625713 Ping_R0114 tRNA Ping_R0114 NC_008709.1 4171471 4171547 R tRNA-Arg complement(4171471..4171547) Psychromonas ingrahamii 37 4625689 Ping_R0115 tRNA Ping_R0115 NC_008709.1 4171627 4171703 R tRNA-Arg complement(4171627..4171703) Psychromonas ingrahamii 37 4625690 Ping_R0116 tRNA Ping_R0116 NC_008709.1 4171766 4171842 R tRNA-Arg complement(4171766..4171842) Psychromonas ingrahamii 37 4625691 Ping_R0117 tRNA Ping_R0117 NC_008709.1 4171861 4171953 R tRNA-Ser complement(4171861..4171953) Psychromonas ingrahamii 37 4625692 Ping_R0118 tRNA Ping_R0118 NC_008709.1 4222013 4222089 R tRNA-Pro complement(4222013..4222089) Psychromonas ingrahamii 37 4625605 Ping_R0119 tRNA Ping_R0119 NC_008709.1 4222129 4222204 R tRNA-His complement(4222129..4222204) Psychromonas ingrahamii 37 4625606 Ping_R0120 tRNA Ping_R0120 NC_008709.1 4222246 4222322 R tRNA-Arg complement(4222246..4222322) Psychromonas ingrahamii 37 4625607 Ping_R0001 rRNA Ping_R0001 NC_008709.1 137 1675 D 16S ribosomal RNA 137..1675 Psychromonas ingrahamii 37 4627166 Ping_R0004 rRNA Ping_R0004 NC_008709.1 2504 5395 D 23S ribosomal RNA 2504..5395 Psychromonas ingrahamii 37 4625975 Ping_R0005 rRNA Ping_R0005 NC_008709.1 5697 5812 D 5S ribosomal RNA 5697..5812 Psychromonas ingrahamii 37 4625976 Ping_R0006 rRNA Ping_R0006 NC_008709.1 91410 92948 D 16S ribosomal RNA 91410..92948 Psychromonas ingrahamii 37 4624466 Ping_R0008 rRNA Ping_R0008 NC_008709.1 93714 96605 D 23S ribosomal RNA 93714..96605 Psychromonas ingrahamii 37 4624468 Ping_R0009 rRNA Ping_R0009 NC_008709.1 96807 96922 D 5S ribosomal RNA 96807..96922 Psychromonas ingrahamii 37 4624469 Ping_R0013 rRNA Ping_R0013 NC_008709.1 296678 298216 D 16S ribosomal RNA 296678..298216 Psychromonas ingrahamii 37 4625794 Ping_R0016 rRNA Ping_R0016 NC_008709.1 299135 302026 D 23S ribosomal RNA 299135..302026 Psychromonas ingrahamii 37 4625797 Ping_R0017 rRNA Ping_R0017 NC_008709.1 302228 302343 D 5S ribosomal RNA 302228..302343 Psychromonas ingrahamii 37 4625798 Ping_R0017a rRNA Ping_R0017a NC_008709.1 302424 302543 D 5S ribosomal RNA 302424..302543 Psychromonas ingrahamii 37 5309678 Ping_R0030 rRNA Ping_R0030 NC_008709.1 740891 742429 D 16S ribosomal RNA 740891..742429 Psychromonas ingrahamii 37 4623946 Ping_R0033 rRNA Ping_R0033 NC_008709.1 743315 746206 D 23S ribosomal RNA 743315..746206 Psychromonas ingrahamii 37 4623949 Ping_R0034 rRNA Ping_R0034 NC_008709.1 746513 746628 D 5S ribosomal RNA 746513..746628 Psychromonas ingrahamii 37 4624123 Ping_R0042 rRNA Ping_R0042 NC_008709.1 1033433 1034971 D 16S ribosomal RNA 1033433..1034971 Psychromonas ingrahamii 37 4625852 Ping_R0044 rRNA Ping_R0044 NC_008709.1 1035795 1038686 D 23S ribosomal RNA 1035795..1038686 Psychromonas ingrahamii 37 4625854 Ping_R0045 rRNA Ping_R0045 NC_008709.1 1038887 1039004 D 5S ribosomal RNA 1038887..1039004 Psychromonas ingrahamii 37 4625855 Ping_R0058 rRNA Ping_R0058 NC_008709.1 1192694 1194232 D 16S ribosomal RNA 1192694..1194232 Psychromonas ingrahamii 37 4626662 Ping_R0060 rRNA Ping_R0060 NC_008709.1 1195044 1197935 D 23S ribosomal RNA 1195044..1197935 Psychromonas ingrahamii 37 4626664 Ping_R0061 rRNA Ping_R0061 NC_008709.1 1198129 1198244 D 5S ribosomal RNA 1198129..1198244 Psychromonas ingrahamii 37 4626665 Ping_R0089 rRNA Ping_R0089 NC_008709.1 2928250 2928365 R 5S ribosomal RNA complement(2928250..2928365) Psychromonas ingrahamii 37 4625470 Ping_R0090 rRNA Ping_R0090 NC_008709.1 2928672 2931563 R 23S ribosomal RNA complement(2928672..2931563) Psychromonas ingrahamii 37 4625471 Ping_R0091 rRNA Ping_R0091 NC_008709.1 2932194 2933732 R 16S ribosomal RNA complement(2932194..2933732) Psychromonas ingrahamii 37 4625472 Ping_R0101 rRNA Ping_R0101 NC_008709.1 3395902 3396017 R 5S ribosomal RNA complement(3395902..3396017) Psychromonas ingrahamii 37 4623782 Ping_R0102 rRNA Ping_R0102 NC_008709.1 3396320 3399211 R 23S ribosomal RNA complement(3396320..3399211) Psychromonas ingrahamii 37 4623783 Ping_R0103 rRNA Ping_R0103 NC_008709.1 3399843 3401379 R 16S ribosomal RNA complement(3399843..3401379) Psychromonas ingrahamii 37 4623784 Ping_R0104 rRNA Ping_R0104 NC_008709.1 3944298 3944413 R 5S ribosomal RNA complement(3944298..3944413) Psychromonas ingrahamii 37 4624801 Ping_R0105 rRNA Ping_R0105 NC_008709.1 3944718 3947609 R 23S ribosomal RNA complement(3944718..3947609) Psychromonas ingrahamii 37 4624802 Ping_R0107 rRNA Ping_R0107 NC_008709.1 3948373 3949911 R 16S ribosomal RNA complement(3948373..3949911) Psychromonas ingrahamii 37 4624804 Ping_R0108 rRNA Ping_R0108 NC_008709.1 4051006 4051121 R 5S ribosomal RNA complement(4051006..4051121) Psychromonas ingrahamii 37 4625768 Ping_R0109 rRNA Ping_R0109 NC_008709.1 4051421 4054312 R 23S ribosomal RNA complement(4051421..4054312) Psychromonas ingrahamii 37 4625769 Ping_R0110 rRNA Ping_R0110 NC_008709.1 4054943 4056481 R 16S ribosomal RNA complement(4054943..4056481) Psychromonas ingrahamii 37 4625770