-- dump date   	20140620_022723
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_005198096.1	PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_005198097.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_005198098.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_005198099.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_005198100.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005198101.1	PFAM: Protein of unknown function (DUF3748); WD40-like Beta Propeller Repeat
YP_005198102.1	PFAM: Protein of unknown function (DUF1375)
YP_005198103.1	PFAM: Hsp20/alpha crystallin family
YP_005198105.1	PFAM: Hsp20/alpha crystallin family
YP_005198106.1	PFAM: Aminotransferase class I and II
YP_005198108.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005198109.1	PFAM: Major Facilitator Superfamily
YP_005198111.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005198112.1	PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter
YP_005198113.1	PFAM: Melibiase
YP_005198114.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005198115.1	PFAM: OmpA family
YP_005198116.1	PFAM: Acetyltransferase (GNAT) family
YP_005198117.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_005198118.1	PFAM: Autotransporter beta-domain; GDSL-like Lipase/Acylhydrolase
YP_005198119.1	PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit
YP_005198120.1	PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit
YP_005198121.1	PFAM: Protein of unknown function (DUF3053)
YP_005198122.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005198123.1	PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, mannitol-specific IIC component
YP_005198124.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005198125.1	PFAM: Mannitol repressor
YP_005198127.1	PFAM: DSBA-like thioredoxin domain
YP_005198129.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005198130.1	PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, mannitol-specific IIC component
YP_005198131.1	PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain
YP_005198132.1	PFAM: Mannitol repressor
YP_005198134.1	PFAM: LysE type translocator
YP_005198135.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_005198137.1	PFAM: Protein of unknown function (DUF2810)
YP_005198138.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005198139.1	PFAM: MOSC domain; 3-alpha domain
YP_005198140.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005198141.1	PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_005198142.1	PFAM: Fibronectin type III domain
YP_005198143.1	PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_005198144.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type
YP_005198145.1	PFAM: Formate dehydrogenase N, transmembrane; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing
YP_005198146.1	PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit
YP_005198147.1	PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE
YP_005198148.1	PFAM: Glutathione S-transferase, C-terminal domain
YP_005198149.1	PFAM: Aldehyde dehydrogenase family
YP_005198150.1	PFAM: DSBA-like thioredoxin domain
YP_005198152.1	PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family
YP_005198153.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005198154.1	PFAM: ABC transporter; Predicted permease
YP_005198155.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_005198156.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005198157.1	PFAM: MaoC like domain
YP_005198158.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005198159.1	PFAM: short chain dehydrogenase; manually curated
YP_005198161.1	PFAM: Major Facilitator Superfamily; manually curated; non-canonical start codon
YP_005198162.1	PFAM: Acyltransferase family
YP_005198163.1	PFAM: Divergent AAA domain
YP_005198164.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005198165.1	PFAM: Isochorismatase family
YP_005198166.1	PFAM: DJ-1/PfpI family
YP_005198167.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005198168.1	PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter
YP_005198169.1	PFAM: Cupin domain; Helix-turn-helix
YP_005198170.1	PFAM: Acetyltransferase (GNAT) family
YP_005198171.1	PFAM: Acetyltransferase (GNAT) family
YP_005198173.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005198176.1	PFAM: Glutathione S-transferase, N-terminal domain
YP_005198177.1	PFAM: Acetyltransferase (GNAT) family
YP_005198178.1	PFAM: LysE type translocator
YP_005198179.1	PFAM: Protein of unknown function (DUF1471)
YP_005198180.1	PFAM: Transglycosylase associated protein
YP_005198181.1	PFAM: Plasmid stabilisation system protein
YP_005198182.1	PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_005198184.1	PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE
YP_005198185.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD
YP_005198186.1	PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC
YP_005198187.1	PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB
YP_005198188.1	TIGRFAM: urea ABC transporter, urea binding protein
YP_005198189.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005198190.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain, N-terminal domain; Allophanate hydrolase subunit 1; Biotin-requiring enzyme; TIGRFAM: urea carboxylase; biotin-dependent carboxylase uncharacterized domain
YP_005198191.1	PFAM: Amidase; TIGRFAM: allophanate hydrolase
YP_005198193.1	PFAM: MarR family; manually curated
YP_005198194.1	PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily
YP_005198195.1	PFAM: Sulfatase; Domain of unknown function (DUF1705)
YP_005198196.1	PFAM: Toxin with endonuclease activity YhaV
YP_005198197.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_005198199.1	PFAM: Protein of unknown function (DUF3423)
YP_005198200.1	PFAM: MmgE/PrpD family
YP_005198201.1	PFAM: ABC transporter
YP_005198202.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005198203.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198204.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198205.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005198206.1	PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase
YP_005198207.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005198208.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005198209.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198210.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198211.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005198212.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005198213.1	PFAM: Fic/DOC family; TIGRFAM: mobile mystery protein B
YP_005198214.1	PFAM: Helix-turn-helix; TIGRFAM: mobile mystery protein A
YP_005198215.1	PFAM: Glycosyl hydrolases family 8
YP_005198216.1	PFAM: Cellulose synthase subunit D
YP_005198217.1	PFAM: Cellulose synthase operon protein C C-terminus (BCSC_C)
YP_005198218.1	PFAM: Bacterial cellulose synthase subunit
YP_005198219.1	PFAM: Glycosyl transferase family 2; PilZ domain; Cellulose synthase; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming)
YP_005198220.1	PFAM: YhjQ protein; TIGRFAM: cellulose synthase operon protein YhjQ
YP_005198222.1	PFAM: EAL domain; HAMP domain; GGDEF domain
YP_005198223.1	PFAM: Sodium:dicarboxylate symporter family
YP_005198224.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005198225.1	PFAM: pfkB family carbohydrate kinase
YP_005198226.1	PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme
YP_005198227.1	PFAM: EAL domain
YP_005198228.1	PFAM: AsmA family
YP_005198229.1	PFAM: CDP-diacylglycerol pyrophosphatase; TIGRFAM: CDP-diacylglycerol pyrophosphatase, bacterial type
YP_005198230.1	PFAM: Sugar (and other) transporter; Major Facilitator Superfamily; TIGRFAM: metabolite-proton symporter
YP_005198232.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease, putative
YP_005198233.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005198234.1	PFAM: short chain dehydrogenase
YP_005198235.1	PFAM: PilZ domain; YcgR protein
YP_005198236.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_005198238.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005198241.1	PFAM: Malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase
YP_005198242.1	PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein
YP_005198246.1	PFAM: Protein of unknown function (DUF3304)
YP_005198247.1	PFAM: Protein of unknown function (DUF3304)
YP_005198248.1	PFAM: Protein of unknown function (DUF3304)
YP_005198249.1	PFAM: Protein of unknown function (DUF3304)
YP_005198250.1	PFAM: Uncharacterized conserved protein (DUF2235)
YP_005198251.1	PFAM: Malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase
YP_005198252.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family; probable hydroxymethylpyrimidine transporter CytX
YP_005198255.1	PFAM: Pentapeptide repeats (8 copies)
YP_005198257.1	PFAM: Peptidase family M3
YP_005198258.1	PFAM: Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005198259.1	PFAM: Major Facilitator Superfamily
YP_005198260.1	PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region
YP_005198261.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005198262.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005198263.1	PFAM: Protein of unknown function, DUF482
YP_005198264.1	PFAM: Carbonic anhydrase
YP_005198265.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_005198266.1	PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme
YP_005198268.1	PFAM: PTS system sugar-specific permease component
YP_005198269.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit
YP_005198270.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005198272.1	PFAM: DeoC/LacD family aldolase
YP_005198273.1	PFAM: Sigma-70, region 4; Putative sugar-binding domain
YP_005198274.1	PFAM: alpha/beta hydrolase fold
YP_005198275.1	PFAM: Isochorismatase family
YP_005198276.1	PFAM: DoxX
YP_005198277.1	PFAM: Bacterial protein of unknown function (DUF894)
YP_005198278.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005198280.1	PFAM: GIY-YIG catalytic domain
YP_005198282.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: glutathione-disulfide reductase, animal/bacterial
YP_005198283.1	PFAM: Protein of unknown function (DUF519)
YP_005198284.1	PFAM: Peptidase family M3
YP_005198285.1	PFAM: Protein of unknown function (DUF548)
YP_005198287.1	PFAM: Universal stress protein family
YP_005198288.1	PFAM: Universal stress protein B (UspB)
YP_005198289.1	PFAM: Phosphate transporter family
YP_005198290.1	PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family
YP_005198292.1	PFAM: Beta-lactamase
YP_005198293.1	PFAM: Acyltransferase
YP_005198294.1	PFAM: Major Facilitator Superfamily
YP_005198295.1	PFAM: Acetyltransferase (GNAT) family
YP_005198300.1	PFAM: Pirin
YP_005198301.1	PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain
YP_005198302.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component
YP_005198303.1	PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component
YP_005198304.1	PFAM: Glycosyl hydrolase family 1
YP_005198305.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005198306.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005198308.1	PFAM: Integrase core domain
YP_005198309.1	PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family
YP_005198310.1	PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_005198311.1	PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family
YP_005198312.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase, gamma-proteobacterial
YP_005198313.1	PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_005198314.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX
YP_005198315.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase
YP_005198316.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_005198317.1	PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases
YP_005198318.1	PFAM: FAD dependent oxidoreductase
YP_005198319.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005198320.1	PFAM: Protein of unknown function (DUF3582); Rhomboid family
YP_005198321.1	PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_005198322.1	PFAM: Rhodanese-like domain
YP_005198323.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005198325.1	PFAM: PTS system sugar-specific permease component
YP_005198326.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit
YP_005198327.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005198328.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family
YP_005198329.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hexulose-6-phosphate isomerase, putative
YP_005198330.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase
YP_005198331.1	PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases
YP_005198332.1	PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_005198333.1	PFAM: Iron-sulphur cluster biosynthesis; NifU-like domain; TIGRFAM: IscR-regulated protein YhgI
YP_005198334.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein
YP_005198335.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH
YP_005198336.1	PFAM: Protein of unknown function (DUF1471)
YP_005198337.1	TIGRFAM: malonate decarboxylase, alpha subunit
YP_005198338.1	PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB
YP_005198339.1	PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: malonate decarboxylase acyl carrier protein
YP_005198340.1	PFAM: Carboxyl transferase domain; TIGRFAM: malonate decarboxylase, beta subunit
YP_005198341.1	PFAM: Malonate decarboxylase gamma subunit (MdcE); TIGRFAM: malonate decarboxylase, gamma subunit
YP_005198342.1	PFAM: Membrane transport protein; TIGRFAM: he Auxin Efflux Carrier (AEC) Family
YP_005198343.1	PFAM: Phosphoribosyl-dephospho-CoA transferase MdcG; TIGRFAM: malonate decarboxylase holo-[acyl-carrier-protein] synthase
YP_005198344.1	PFAM: Acyl transferase domain; TIGRFAM: malonate decarboxylase, epsilon subunit
YP_005198346.1	PFAM: Protein of unknown function (DUF3532)
YP_005198347.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005198348.1	PFAM: FeoC like transcriptional regulator
YP_005198349.1	PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain
YP_005198350.1	PFAM: FeoA domain
YP_005198352.1	PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_005198353.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB
YP_005198354.1	PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain
YP_005198355.1	PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C
YP_005198357.1	PFAM: Fimbrial Usher protein
YP_005198358.1	PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain
YP_005198359.1	PFAM: Fimbrial protein
YP_005198360.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005198361.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005198362.1	PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP)
YP_005198363.1	PFAM: Hsp33 protein
YP_005198364.1	PFAM: S4 domain
YP_005198365.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_005198366.1	PFAM: Intracellular growth attenuator protein IgaA
YP_005198367.1	PFAM: NUDIX domain
YP_005198368.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_005198369.1	PFAM: Competence protein A
YP_005198370.1	PFAM: Fimbrial assembly protein (PilN)
YP_005198371.1	PFAM: Protein of unknown function (DUF2531)
YP_005198372.1	PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ
YP_005198373.1	PFAM: Shikimate kinase
YP_005198374.1	PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_005198375.1	PFAM: Sporulation related domain
YP_005198376.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam)
YP_005198377.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_005198378.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic
YP_005198379.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_005198380.1	PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain
YP_005198381.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit
YP_005198382.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit
YP_005198383.1	PFAM: Amidohydrolase family
YP_005198384.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005198386.1	PFAM: Protein of unknown function (DUF2559)
YP_005198387.1	PFAM: Fic/DOC family
YP_005198388.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_005198389.1	PFAM: Aminotransferase class-III; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferases
YP_005198390.1	PFAM: Fusaric acid resistance protein family; TIGRFAM: integral membrane protein, YccS/YhfK family
YP_005198391.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_005198392.1	PFAM: OsmC-like protein
YP_005198393.1	PFAM: Phosphoribulokinase / Uridine kinase family
YP_005198394.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005198395.1	PFAM: Ureidoglycolate hydrolase
YP_005198396.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005198397.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: glyoxylate carboligase
YP_005198398.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hydroxypyruvate isomerase
YP_005198399.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase
YP_005198400.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family
YP_005198401.1	PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase, multifunctional complex type
YP_005198402.1	PFAM: Permease family
YP_005198403.1	PFAM: Cupin domain; Protein of unknown function (DUF861); TIGRFAM: putative allantoin catabolism protein
YP_005198404.1	PFAM: Peptidase family M20/M25/M40; TIGRFAM: allantoate amidohydrolase; amidase, hydantoinase/carbamoylase family
YP_005198405.1	PFAM: Malate/L-lactate dehydrogenase; TIGRFAM: ureidoglycolate dehydrogenase
YP_005198406.1	PFAM: CoA binding domain; CoA-ligase
YP_005198407.1	PFAM: Protein of unknown function (DUF1116)
YP_005198408.1	PFAM: Protein of unknown function (DUF2877)
YP_005198409.1	PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase
YP_005198410.1	PFAM: Uncharacterised protein family (UPF0270)
YP_005198411.1	PFAM: alpha/beta hydrolase fold
YP_005198412.1	PFAM: LysE type translocator
YP_005198413.1	PFAM: ABC transporter
YP_005198414.1	PFAM: Flavodoxin-like fold
YP_005198415.1	PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family
YP_005198416.1	PFAM: Probable metal-binding protein (DUF2387); TIGRFAM: conserved hypothetical metal-binding protein
YP_005198417.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_005198418.1	PFAM: SlyX
YP_005198419.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
YP_005198420.1	PFAM: YheO-like PAS domain
YP_005198421.1	PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusD/DsrE
YP_005198422.1	PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusC/DsrF
YP_005198423.1	PFAM: DsrH like protein; TIGRFAM: sulfur relay protein TusB/DsrH
YP_005198424.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_005198425.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_005198426.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005198427.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_005198428.1	PFAM: Glycosyl hydrolases family 18
YP_005198429.1	PFAM: BFD-like [2Fe-2S] binding domain; manually curated
YP_005198430.1	PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin
YP_005198431.1	PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family
YP_005198432.1	PFAM: General secretion pathway, M protein
YP_005198433.1	PFAM: General secretion pathway protein L (GspL); TIGRFAM: general secretion pathway protein L
YP_005198434.1	PFAM: General secretion pathway protein K
YP_005198435.1	PFAM: Prokaryotic N-terminal methylation motif; Pseudopilin GspJ; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein J
YP_005198436.1	PFAM: Bacterial type II secretion system protein I/J; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein I
YP_005198437.1	PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H
YP_005198438.1	PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain
YP_005198439.1	PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F
YP_005198440.1	PFAM: Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E
YP_005198441.1	PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D; type IV pilus secretin (or competence protein) PilQ
YP_005198442.1	TIGRFAM: general secretion pathway protein C
YP_005198443.1	PFAM: Putative peptidoglycan binding domain
YP_005198445.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_005198446.1	PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_005198447.1	PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle
YP_005198448.1	PFAM: Ribosomal protein L23
YP_005198449.1	PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_005198450.1	PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_005198451.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_005198452.1	PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_005198453.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_005198454.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_005198455.1	PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_005198456.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_005198457.1	PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_005198458.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_005198459.1	PFAM: Ribosomal protein S14p/S29e
YP_005198460.1	PFAM: Ribosomal protein S8
YP_005198461.1	PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_005198462.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_005198463.1	PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_005198464.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_005198465.1	PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_005198466.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_005198467.1	PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_005198468.1	PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; manually curated
YP_005198469.1	PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_005198470.1	PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_005198471.1	PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_005198472.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_005198473.1	PFAM: Domain of unknown function (DUF1992)
YP_005198474.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Zn(II)-responsive transcriptional regulator
YP_005198475.1	PFAM: Domain of unknown function
YP_005198476.1	PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_005198477.1	PFAM: TrkA-N domain; TrkA-C domain
YP_005198478.1	PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB
YP_005198479.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_005198480.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_005198481.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_005198482.1	PFAM: Protein of unknown function (DUF494)
YP_005198483.1	PFAM: Topoisomerase DNA binding C4 zinc finger
YP_005198484.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_005198485.1	PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_005198487.1	PFAM: Sodium:solute symporter family; TIGRFAM: cation/acetate symporter ActP; transporter, SSS family
YP_005198488.1	PFAM: Protein of unknown function, DUF485
YP_005198489.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_005198490.1	PFAM: Fimbrial protein
YP_005198491.1	PFAM: Fimbrial Usher protein
YP_005198492.1	PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain
YP_005198494.1	PFAM: Helix-turn-helix
YP_005198496.1	PFAM: Transcriptional regulatory protein, C terminal
YP_005198497.1	PFAM: LD-carboxypeptidase
YP_005198498.1	PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter
YP_005198499.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_005198501.1	PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region
YP_005198502.1	PFAM: Anaerobic c4-dicarboxylate membrane transporter; TIGRFAM: anaerobic c4-dicarboxylate membrane transporter family protein
YP_005198503.1	PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase
YP_005198505.1	PFAM: FxsA cytoplasmic membrane protein
YP_005198506.1	PFAM: Chaperonin 10 Kd subunit
YP_005198507.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_005198509.1	PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein
YP_005198510.1	PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_005198511.1	PFAM: Entericidin EcnA/B family; manually curated
YP_005198512.1	PFAM: Entericidin EcnA/B family
YP_005198513.1	PFAM: Lipocalin-like domain
YP_005198514.1	PFAM: Fumarate reductase subunit D
YP_005198515.1	PFAM: Fumarate reductase subunit C
YP_005198516.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_005198517.1	PFAM: domain; FAD binding domain; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_005198518.1	PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase-like protein GenX
YP_005198519.1	PFAM: Mechanosensitive ion channel
YP_005198520.1	PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor
YP_005198521.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_005198522.1	PFAM: Exonuclease
YP_005198523.1	PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; manually curated
YP_005198524.1	PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region
YP_005198525.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family
YP_005198526.1	PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain; Localisation of periplasmic protein complexes
YP_005198527.1	PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL
YP_005198528.1	PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase
YP_005198529.1	PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq
YP_005198530.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain
YP_005198531.1	PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein
YP_005198532.1	PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein
YP_005198533.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2065)
YP_005198534.1	PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_005198535.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein
YP_005198536.1	PFAM: RNB domain; Ribonuclease B OB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases
YP_005198537.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_005198538.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_005198539.1	PFAM: Protein of unknown function (DUF1471)
YP_005198540.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005198541.1	PFAM: Prolyl oligopeptidase family
YP_005198542.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_005198543.1	PFAM: Single-strand binding protein family
YP_005198544.1	PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_005198545.1	PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_005198546.1	PFAM: Opacity-associated protein A N-terminal motif; Opacity-associated protein A LysM-like domain
YP_005198547.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
YP_005198548.1	PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein
YP_005198549.1	PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase
YP_005198550.1	PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial
YP_005198551.1	PFAM: Bacterial protein of unknown function (YtfJ_HI0045); TIGRFAM: conserved hypothetical protein YtfJ-family, TIGR01626
YP_005198552.1	PFAM: Protein of unknown function (DUF1107)
YP_005198553.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005198554.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_005198555.1	PFAM: Surface antigen variable number repeat; Surface antigen
YP_005198556.1	PFAM: Family of unknown function (DUF490)
YP_005198557.1	PFAM: AIG2-like family
YP_005198558.1	PFAM: Inorganic pyrophosphatase
YP_005198560.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005198561.1	PFAM: Fructose-1-6-bisphosphatase
YP_005198562.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase
YP_005198563.1	PFAM: Protein of unknown function (DUF1471)
YP_005198564.1	PFAM: Protein of unknown function (DUF1471)
YP_005198565.1	PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_005198566.1	PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent
YP_005198568.1	PFAM: Mu DNA-binding domain
YP_005198569.1	PFAM: Polyprenyl synthetase
YP_005198570.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_005198571.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_005198572.1	PFAM: EamA-like transporter family
YP_005198573.1	PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain
YP_005198574.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005198575.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005198576.1	PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
YP_005198577.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_005198578.1	PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family
YP_005198579.1	PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ
YP_005198580.1	PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_005198581.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_005198582.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase
YP_005198583.1	PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_005198584.1	PFAM: Uncharacterised BCR, YhbC family COG0779
YP_005198585.1	PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication
YP_005198586.1	PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_005198587.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_005198588.1	PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_005198589.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; manually curated
YP_005198590.1	PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_005198591.1	PFAM: Tetratricopeptide repeat
YP_005198592.1	PFAM: Helicase conserved C-terminal domain; Cold shock protein DEAD box A; DbpA RNA binding domain; DEAD/DEAH box helicase
YP_005198593.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1
YP_005198594.1	PFAM: HlyD family secretion protein
YP_005198595.1	PFAM: ABC-2 type transporter
YP_005198596.1	PFAM: ABC-2 type transporter
YP_005198597.1	PFAM: Peptidase family U32
YP_005198598.1	PFAM: Peptidase family U32
YP_005198599.1	PFAM: SCP-2 sterol transfer family
YP_005198600.1	PFAM: Acetyltransferase (GNAT) family
YP_005198601.1	PFAM: GIY-YIG catalytic domain
YP_005198603.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_005198604.1	PFAM: Semialdehyde dehydrogenase, NAD binding domain
YP_005198605.1	PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family
YP_005198606.1	PFAM: Guanylate kinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
YP_005198607.1	PFAM: Amidohydrolase family; TIGRFAM: phosphonate metabolism protein PhnM
YP_005198608.1	PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL
YP_005198609.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK
YP_005198610.1	PFAM: Phosphonate metabolism protein PhnJ
YP_005198611.1	PFAM: Bacterial phosphonate metabolism protein (PhnI)
YP_005198612.1	PFAM: Bacterial phosphonate metabolism protein (PhnH); TIGRFAM: phosphonate C-P lyase system protein PhnH
YP_005198613.1	PFAM: Phosphonate metabolism protein PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG
YP_005198614.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF
YP_005198615.1	PFAM: Fimbrial protein
YP_005198616.1	PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain
YP_005198617.1	PFAM: Fimbrial Usher protein
YP_005198618.1	PFAM: Fimbrial protein
YP_005198619.1	PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type
YP_005198620.1	PFAM: Haemagluttinin repeat; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; adhesin HecA family 20-residue repeat (two copies)
YP_005198621.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; manually curated
YP_005198622.1	PFAM: Glycine radical; ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase
YP_005198623.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: alpha,alpha-phosphotrehalase
YP_005198624.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, trehalose-specific IIBC component; PTS system, glucose-like IIB component
YP_005198625.1	PFAM: Bacterial regulatory proteins, lacI family; family; TIGRFAM: trehalose operon repressor, proteobacterial
YP_005198626.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase
YP_005198627.1	manually curated
YP_005198629.1	PFAM: Transposase IS200 like; manually curated
YP_005198630.1	PFAM: Sodium:dicarboxylate symporter family
YP_005198631.1	PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family
YP_005198632.1	PFAM: Glutamine amidotransferase class-I
YP_005198633.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005198634.1	PFAM: Protein of unknown function DUF45
YP_005198635.1	PFAM: Methyltransferase small domain
YP_005198636.1	TIGRFAM: type VI secretion lipoprotein, VC_A0113 family
YP_005198637.1	PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family
YP_005198638.1	PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family
YP_005198639.1	PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing
YP_005198646.1	PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein
YP_005198647.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family
YP_005198648.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family
YP_005198649.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005198650.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005198651.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005198653.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005198654.1	PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases
YP_005198655.1	PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_005198656.1	PFAM: Helix-turn-helix
YP_005198657.1	PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain
YP_005198658.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198659.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198660.1	PFAM: Bacterial extracellular solute-binding protein
YP_005198661.1	PFAM: ABC transporter; TOBE domain
YP_005198662.1	PFAM: LamB porin
YP_005198663.1	PFAM: Maltose operon periplasmic protein precursor (MalM)
YP_005198666.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005198667.1	PFAM: Protein of unknown function (DUF2000)
YP_005198668.1	PFAM: PAP2 superfamily
YP_005198669.1	PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005198670.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_005198671.1	PFAM: Polysaccharide biosynthesis protein
YP_005198672.1	PFAM: Glycosyl transferase family 4
YP_005198673.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005198674.1	PFAM: Glycosyl transferases group 1
YP_005198675.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005198676.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_005198677.1	PFAM: Glycosyl transferases group 1
YP_005198678.1	PFAM: Glycosyl transferases group 1
YP_005198680.1	PFAM: Glycosyl transferases group 1
YP_005198681.1	PFAM: Glycosyl transferases group 1
YP_005198682.1	PFAM: Glycosyl transferases group 1
YP_005198684.1	PFAM: Phosphoglycerate mutase family
YP_005198685.1	PFAM: Glycosyl transferases group 1
YP_005198686.1	PFAM: Glycosyl transferases group 1
YP_005198687.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_005198690.1	PFAM: ABC transporter
YP_005198691.1	PFAM: ABC-2 type transporter
YP_005198692.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005198693.1	PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_005198698.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug)
YP_005198699.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_005198700.1	PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core
YP_005198701.1	PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21
YP_005198702.1	PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family
YP_005198703.1	PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_005198704.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_005198705.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_005198706.1	PFAM: HD domain; Poly A polymerase head domain
YP_005198708.1	PFAM: CYTH domain
YP_005198709.1	PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase
YP_005198710.1	PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain
YP_005198711.1	PFAM: Amino acid permease
YP_005198712.1	PFAM: Protein of unknown function (DUF526)
YP_005198713.1	PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_005198714.1	PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase
YP_005198715.1	PFAM: Glutathionylspermidine synthase
YP_005198716.1	PFAM: Protein of unknown function (DUF1190)
YP_005198717.1	PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family
YP_005198718.1	PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family
YP_005198719.1	PFAM: Protein of unknown function (DUF1249)
YP_005198720.1	PFAM: Calcineurin-like phosphoesterase C-terminal; Calcineurin-like phosphoesterase
YP_005198721.1	PFAM: Uncharacterised protein family (UPF0227)
YP_005198722.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial
YP_005198723.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_005198724.1	PFAM: Flavodoxin-like fold
YP_005198725.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial
YP_005198726.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005198727.1	PFAM: Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_005198728.1	PFAM: Aldo/keto reductase family
YP_005198729.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005198730.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus
YP_005198731.1	PFAM: SNARE associated Golgi protein
YP_005198732.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: cystathionine beta-lyase, bacterial
YP_005198733.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_005198734.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_005198735.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_005198736.1	PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB
YP_005198737.1	PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 1; TolR protein
YP_005198738.1	PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase
YP_005198739.1	PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter
YP_005198740.1	PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase
YP_005198741.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase
YP_005198742.1	PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase
YP_005198743.1	PFAM: Alanine racemase, N-terminal domain
YP_005198744.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Uncharacterized signal transduction histidine kinase domain (DUF2222); Hpt domain
YP_005198745.1	PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_005198746.1	PFAM: ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_005198747.1	PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_005198748.1	PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_005198749.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_005198750.1	PFAM: Radical SAM superfamily
YP_005198751.1	PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein
YP_005198753.1	PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component
YP_005198754.1	PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component
YP_005198755.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosphoadenosine phosphosulfate reductase, thioredoxin dependent; phosophoadenylyl-sulfate reductase (thioredoxin)
YP_005198756.1	PFAM: Peptidase family M28
YP_005198757.1	PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain
YP_005198758.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit
YP_005198759.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain
YP_005198760.1	PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK)
YP_005198761.1	PFAM: Protein of unknown function (DUF3561)
YP_005198762.1	PFAM: Septum formation initiator
YP_005198763.1	PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_005198764.1	PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_005198765.1	PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family
YP_005198766.1	PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE
YP_005198767.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_005198768.1	PFAM: Peptidase family M23; LysM domain
YP_005198769.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family
YP_005198770.1	PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS
YP_005198772.1	PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain
YP_005198773.1	PFAM: Fimbrial Usher protein
YP_005198775.1	PFAM: Fimbrial protein
YP_005198778.1	PFAM: Fimbrial protein
YP_005198780.1	TIGRFAM: lytic murein transglycosylase B
YP_005198781.1	PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_005198782.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_005198783.1	PFAM: RecX family
YP_005198784.1	PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase
YP_005198785.1	PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_005198786.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_005198787.1	PFAM: SNARE associated Golgi protein
YP_005198788.1	PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase
YP_005198789.1	PFAM: S-Ribosylhomocysteinase (LuxS)
YP_005198790.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005198791.1	PFAM: Cytochrome C assembly protein
YP_005198792.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_005198793.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_005198794.1	PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_005198795.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_005198796.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_005198797.1	PFAM: Ogr/Delta-like zinc finger
YP_005198798.1	PFAM: Phage late control gene D protein (GPD)
YP_005198799.1	PFAM: Phage P2 GpU
YP_005198800.1	TIGRFAM: phage tail tape measure protein, TP901 family, core region
YP_005198801.1	PFAM: Phage tail protein E
YP_005198802.1	PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family
YP_005198803.1	PFAM: Phage tail sheath protein
YP_005198804.1	PFAM: Phage Tail Collar Domain
YP_005198805.1	PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein, P2 protein I family
YP_005198806.1	PFAM: Baseplate J-like protein
YP_005198807.1	PFAM: Gene 25-like lysozyme
YP_005198808.1	PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V; manually curated
YP_005198809.1	PFAM: P2 phage tail completion protein R (GpR)
YP_005198810.1	TIGRFAM: phage lysis regulatory protein, LysB family
YP_005198811.1	PFAM: Phage lysozyme
YP_005198813.1	PFAM: Phage Tail Protein X
YP_005198815.1	PFAM: Bacteriophage replication gene A protein (GPA)
YP_005198816.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family
YP_005198818.1	PFAM: Bacteriophage CI repressor helix-turn-helix domain
YP_005198819.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005198820.1	PFAM: Prephenate dehydrogenase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of T-protein
YP_005198821.1	PFAM: Prephenate dehydratase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 1; chorismate mutase, putative
YP_005198822.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_005198823.1	TIGRFAM: outer membrane assembly lipoprotein YfiO
YP_005198824.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_005198825.1	PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family
YP_005198826.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_005198827.1	PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter
YP_005198828.1	PFAM: Phospholipase D Active site motif
YP_005198829.1	PFAM: Acetyltransferase (GNAT) family
YP_005198830.1	PFAM: DTW domain
YP_005198831.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005198832.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding
YP_005198833.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005198834.1	PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A)
YP_005198835.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_005198836.1	PFAM: MarR family
YP_005198837.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_005198838.1	PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_005198839.1	PFAM: Major Facilitator Superfamily
YP_005198840.1	PFAM: Uncharacterised protein family (UPF0150)
YP_005198841.1	PFAM: YcfA-like protein
YP_005198842.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005198843.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005198844.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198845.1	PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit
YP_005198847.1	PFAM: Response regulator receiver domain
YP_005198848.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold
YP_005198849.1	PFAM: 2-hydroxycarboxylate transporter family
YP_005198850.1	PFAM: NlpC/P60 family
YP_005198852.1	PFAM: Aldo/keto reductase family
YP_005198853.1	PFAM: Ribonucleotide reductase, small chain
YP_005198854.1	PFAM: Ribonucleotide reductase N-terminal; Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit
YP_005198855.1	PFAM: NrdI Flavodoxin like; TIGRFAM: ribonucleoside-diphosphate reductase 2, operon protein nrdI
YP_005198856.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein NrdH
YP_005198857.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005198858.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIA component
YP_005198859.1	PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain
YP_005198860.1	PFAM: Bacterial protein of unknown function (DUF883)
YP_005198861.1	PFAM: Major Facilitator Superfamily
YP_005198862.1	PFAM: Protein of unknown function (DUF2002)
YP_005198863.1	PFAM: Protein of unknown function (DUF1198)
YP_005198864.1	PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative
YP_005198865.1	PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ
YP_005198866.1	PFAM: Protein of unknown function (DUF339)
YP_005198867.1	PFAM: Protein of unknown function (DUF1434); manually curated
YP_005198868.1	PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain
YP_005198869.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD
YP_005198870.1	PFAM: Disulfide bond isomerase protein N-terminus
YP_005198871.1	PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_005198872.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated
YP_005198873.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_005198876.1	PFAM: Resolvase, N terminal domain
YP_005198879.1	TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass)
YP_005198883.1	PFAM: HNH endonuclease
YP_005198886.1	PFAM: Phage integrase family
YP_005198888.1	PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_005198889.1	PFAM: NIPSNAP
YP_005198890.1	PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein
YP_005198891.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005198892.1	PFAM: Peptidase C26
YP_005198893.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005198894.1	PFAM: AcrB/AcrD/AcrF family
YP_005198895.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005198896.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_005198899.1	manually curated
YP_005198900.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005198901.1	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family
YP_005198902.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_005198903.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005198904.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005198905.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component
YP_005198906.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005198907.1	PFAM: ABC transporter; ABC transporter transmembrane region 2
YP_005198909.1	PFAM: Metallo-beta-lactamase superfamily
YP_005198910.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005198911.1	PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein
YP_005198912.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005198913.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_005198914.1	PFAM: PTS system, Lactose/Cellobiose specific IIA subunit
YP_005198915.1	PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component
YP_005198916.1	PFAM: Glycosyl hydrolase family 1
YP_005198917.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component
YP_005198918.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005198919.1	PFAM: Acetyltransferase (GNAT) family
YP_005198920.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005198921.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005198922.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005198924.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2257)
YP_005198925.1	PFAM: short chain dehydrogenase
YP_005198926.1	PFAM: ATP-grasp domain
YP_005198927.1	PFAM: Major Facilitator Superfamily
YP_005198928.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases
YP_005198929.1	PFAM: Acyltransferase; AMP-binding enzyme
YP_005198930.1	PFAM: Major Facilitator Superfamily
YP_005198931.1	PFAM: Aldo/keto reductase family
YP_005198932.1	PFAM: Prokaryotic membrane lipoprotein lipid attachment site; Bacterial protein of unknown function (DUF903)
YP_005198933.1	PFAM: DNA mismatch repair enzyme MutH; TIGRFAM: DNA mismatch repair endonuclease MutH
YP_005198934.1	PFAM: NUDIX domain
YP_005198935.1	PFAM: GAF domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; manually curated
YP_005198936.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_005198937.1	PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase
YP_005198938.1	TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005198939.1	TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005198940.1	PFAM: Protein of unknown function (DUF2509)
YP_005198941.1	PFAM: Prepilin peptidase dependent protein C; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005198942.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005198943.1	PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase
YP_005198944.1	PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes
YP_005198945.1	PFAM: MltA specific insert domain; 3D domain
YP_005198946.1	PFAM: ThiF family
YP_005198947.1	PFAM: Fe-S metabolism associated domain; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE
YP_005198948.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase, catalytic subunit CsdA; cysteine desulfurases, SufS subfamily
YP_005198949.1	PFAM: Bacterial protein of unknown function (DUF903)
YP_005198950.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005198951.1	PFAM: Protein of unknown function (DUF423)
YP_005198952.1	PFAM: FtsJ-like methyltransferase
YP_005198954.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain
YP_005198955.1	PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase
YP_005198956.1	PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase
YP_005198957.1	PFAM: Syd protein
YP_005198958.1	PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport
YP_005198959.1	PFAM: Domain of unknown function, DUF446
YP_005198960.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005198961.1	PFAM: Flavodoxin
YP_005198962.1	PFAM: Protein of unknown function (DUF3461)
YP_005198963.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
YP_005198964.1	PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase
YP_005198965.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005198966.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_005198967.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_005198968.1	PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_005198969.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_005198970.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_005198971.1	PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_005198972.1	PFAM: Cytidylyltransferase family
YP_005198973.1	PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_005198974.1	PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_005198975.1	PFAM: Outer membrane protein (OmpH-like)
YP_005198976.1	PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_005198977.1	PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_005198978.1	PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_005198979.1	PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase
YP_005198980.1	PFAM: Ribonuclease HII
YP_005198981.1	PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_005198982.1	PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
YP_005198983.1	PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain
YP_005198984.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005198985.1	PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_005198986.1	PFAM: Cytochrome c
YP_005198987.1	PFAM: Modulator of Rho-dependent transcription termination (ROF)
YP_005198988.1	PFAM: Uncharacterised protein family (UPF0253)
YP_005198989.1	PFAM: YaeQ protein
YP_005198990.1	PFAM: RF-1 domain
YP_005198991.1	PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance
YP_005198992.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_005198993.1	PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family
YP_005198995.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_005198996.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005198997.1	PFAM: ABC transporter; NIL domain; TIGRFAM: D-methionine ABC transporter, ATP-binding protein
YP_005198998.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain
YP_005198999.1	manually curated
YP_005199000.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005199001.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005199002.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005199004.1	PFAM: AMP-binding enzyme
YP_005199005.1	PFAM: FabA-like domain
YP_005199006.1	PFAM: Glycosyl transferase family 2; manually curated
YP_005199007.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005199008.1	PFAM: Outer membrane lipoprotein carrier protein LolA
YP_005199009.1	PFAM: MMPL family
YP_005199010.1	PFAM: Protein of unknown function (DUF3261)
YP_005199011.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005199013.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative
YP_005199014.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005199015.1	PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_005199016.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199017.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_005199018.1	PFAM: Transglycosylase SLT domain; MLTD_N; LysM domain
YP_005199019.1	PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase
YP_005199020.1	PFAM: Methyltransferase domain
YP_005199021.1	PFAM: RNase H
YP_005199022.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase
YP_005199023.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase
YP_005199024.1	PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial
YP_005199025.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family
YP_005199026.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005199027.1	PFAM: Asp/Glu/Hydantoin racemase
YP_005199028.1	PFAM: Polysaccharide deacetylase; TIGRFAM: putative urate catabolism protein
YP_005199029.1	PFAM: Protein of unknown function (DUF3225)
YP_005199030.1	PFAM: Amidase; TIGRFAM: amidohydrolase, AtzE family
YP_005199032.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_005199034.1	PFAM: Helix-turn-helix domain, rpiR family; SIS domain
YP_005199035.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005199036.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199037.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199038.1	PFAM: ABC transporter
YP_005199039.1	PFAM: Aminotransferase class-V
YP_005199040.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family
YP_005199041.1	PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase
YP_005199042.1	PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase
YP_005199043.1	PFAM: Glutamine amidotransferase class-I
YP_005199044.1	PFAM: Domain of unknown function (DUF1993)
YP_005199045.1	PFAM: Carbon-nitrogen hydrolase
YP_005199046.1	PFAM: Aminotransferase class I and II
YP_005199047.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: methylthioribulose-1-phosphate dehydratase
YP_005199048.1	TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_005199049.1	PFAM: ARD/ARD' family
YP_005199050.1	PFAM: Putative bacterial lipoprotein (DUF799)
YP_005199052.1	PFAM: Curli production assembly/transport component CsgG
YP_005199054.1	PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase
YP_005199055.1	PFAM: Phosphotransferase enzyme family; TIGRFAM: 5-methylthioribose kinase
YP_005199056.1	PFAM: Protein of unknown function (DUF1456)
YP_005199058.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain
YP_005199059.1	PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase
YP_005199060.1	PFAM: Glutamine amidotransferases class-II
YP_005199061.1	PFAM: L,D-transpeptidase catalytic domain
YP_005199062.1	PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family
YP_005199063.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase
YP_005199064.1	PFAM: Phosphoribosyl transferase domain
YP_005199065.1	PFAM: Alpha/beta hydrolase of unknown function (DUF1100)
YP_005199066.1	PFAM: Transcriptional regulator Crl
YP_005199067.1	PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase
YP_005199068.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_005199069.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199070.1	PFAM: Metallo-beta-lactamase superfamily
YP_005199071.1	PFAM: alpha/beta hydrolase fold
YP_005199073.1	PFAM: Helix-turn-helix
YP_005199074.1	PFAM: Colicin D
YP_005199075.1	PFAM: Colicin immunity protein / pyocin immunity protein
YP_005199078.1	PFAM: Cytotoxic; S-type Pyocin
YP_005199079.1	PFAM: Cloacin immunity protein
YP_005199080.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YP_005199081.1	PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; manually curated
YP_005199082.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_005199083.1	PFAM: Protein of unknown function (DUF1471)
YP_005199085.1	PFAM: Helix-turn-helix; Domain of unknown function (DUF955)
YP_005199087.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005199088.1	PFAM: short chain dehydrogenase
YP_005199089.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_005199091.1	PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005199092.1	PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain
YP_005199093.1	PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit
YP_005199094.1	PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit
YP_005199095.1	PFAM: Putative ATPase (DUF699); TIGRFAM: exodeoxyribonuclease V, alpha subunit
YP_005199099.1	PFAM: Major Facilitator Superfamily
YP_005199100.1	PFAM: Beta-lactamase
YP_005199101.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199102.1	PFAM: Acetyltransferase (GNAT) family
YP_005199103.1	PFAM: Helix-turn-helix
YP_005199104.1	PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005199105.1	PFAM: Protein of unknown function (DUF3053)
YP_005199106.1	PFAM: Protein of unknown function (DUF1615)
YP_005199107.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005199110.1	PFAM: Major Facilitator Superfamily
YP_005199111.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase
YP_005199113.1	PFAM: Major Facilitator Superfamily; TIGRFAM: Oxalate/Formate Antiporter
YP_005199114.1	PFAM: alpha/beta hydrolase fold
YP_005199116.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_005199119.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005199121.1	PFAM: Response regulator receiver domain; Sigma-54 interaction domain
YP_005199122.1	PFAM: Nitrogen regulatory protein P-II
YP_005199123.1	PFAM: Membrane bound FAD containing D-sorbitol dehydrogenase
YP_005199124.1	PFAM: GMC oxidoreductase; FAD dependent oxidoreductase
YP_005199125.1	PFAM: Cytochrome c
YP_005199126.1	PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain
YP_005199127.1	PFAM: Serine hydroxymethyltransferase
YP_005199128.1	PFAM: Nucleoside H+ symporter; TIGRFAM: phenyl proprionate permease family protein
YP_005199129.1	PFAM: PRD domain
YP_005199130.1	PFAM: Protein of unknown function (DUF1007)
YP_005199131.1	PFAM: High-affinity nickel-transport protein
YP_005199132.1	PFAM: Inositol monophosphatase family
YP_005199133.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1
YP_005199134.1	PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein
YP_005199135.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase IscS
YP_005199136.1	PFAM: Cytosol aminopeptidase family, catalytic domain; Peptidase
YP_005199137.1	PFAM: SseB protein
YP_005199138.1	PFAM: Nucleoside diphosphate kinase
YP_005199139.1	PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase
YP_005199140.1	TIGRFAM: type IV pilus biogenesis/stability protein PilW
YP_005199141.1	PFAM: Helix-turn-helix
YP_005199142.1	PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_005199143.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_005199144.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2133)
YP_005199145.1	PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL
YP_005199146.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_005199147.1	PFAM: Membrane transport protein
YP_005199148.1	PFAM: Protein of unknown function (DUF1407)
YP_005199150.1	PFAM: Thermolysin metallopeptidase, alpha-helical domain; Thermolysin metallopeptidase, catalytic domain
YP_005199151.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005199152.1	PFAM: Major Facilitator Superfamily
YP_005199153.1	PFAM: Glycosyl hydrolases family 31
YP_005199154.1	PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_005199155.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_005199156.1	PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_005199157.1	PFAM: GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005199158.1	PFAM: Flavodoxin-like fold
YP_005199159.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199160.1	PFAM: HicB family
YP_005199162.1	PFAM: Protein of unknown function (DUF3313)
YP_005199163.1	PFAM: Acetyltransferase (GNAT) family
YP_005199164.1	PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase
YP_005199165.1	PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_005199167.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005199168.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005199169.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005199170.1	PFAM: Putative glycosyl hydrolase of unknown function (DUF1680)
YP_005199171.1	PFAM: Chorismate mutase type II; TIGRFAM: chorismate mutase, putative
YP_005199172.1	PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter
YP_005199173.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005199174.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_005199175.1	PFAM: Malate/L-lactate dehydrogenase
YP_005199176.1	PFAM: Major Facilitator Superfamily
YP_005199177.1	PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; lipid kinase YegS
YP_005199178.1	PFAM: Peptidase family U32
YP_005199179.1	PFAM: Domain of unknown function (DUF1508)
YP_005199180.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005199181.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005199182.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005199183.1	PFAM: Aldo/keto reductase family
YP_005199184.1	PFAM: Hsp70 protein
YP_005199185.1	PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_005199186.1	PFAM: Transaldolase; TIGRFAM: transaldolase
YP_005199187.1	PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_005199188.1	PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_005199189.1	PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671
YP_005199190.1	PFAM: Coproporphyrinogen III oxidase
YP_005199191.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_005199192.1	PFAM: Acetyltransferase (GNAT) family
YP_005199193.1	PFAM: Bacterial OB fold (BOF) protein; TIGRFAM: TIGR00156 family protein
YP_005199194.1	PFAM: Protein of unknown function (DUF2919)
YP_005199195.1	PFAM: Protein of unknown function (DUF1131)
YP_005199196.1	PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family
YP_005199197.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein
YP_005199198.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT
YP_005199199.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein
YP_005199200.1	PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein
YP_005199201.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B
YP_005199202.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005199203.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated; non-canonical start codon
YP_005199204.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component
YP_005199205.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_005199206.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_005199207.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_005199208.1	PFAM: Protein of unknown function (DUF540)
YP_005199210.1	PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA
YP_005199211.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent
YP_005199213.1	PFAM: Sodium Bile acid symporter family
YP_005199214.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199216.1	PFAM: Bacterial protein of unknown function (DUF925)
YP_005199217.1	PFAM: Amino acid permease; TIGRFAM: ethanolamine permease
YP_005199218.1	PFAM: Ethanolamine ammonia lyase large subunit (EutB)
YP_005199219.1	PFAM: Ethanolamine ammonia-lyase light chain (EutC)
YP_005199220.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_005199221.1	PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter
YP_005199222.1	PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter
YP_005199224.1	PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters
YP_005199225.1	PFAM: Aldo/keto reductase family
YP_005199226.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate decarboxylase, Erwinia family
YP_005199227.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199228.1	PFAM: Bacterial Transmembrane Pair family
YP_005199229.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase
YP_005199230.1	PFAM: Voltage gated chloride channel
YP_005199231.1	PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type
YP_005199233.1	PFAM: Integrase core domain
YP_005199234.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005199235.1	PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005199236.1	PFAM: Acetyltransferase (GNAT) family
YP_005199237.1	PFAM: Aminotransferase class I and II
YP_005199240.1	PFAM: Curli production assembly/transport component CsgG
YP_005199241.1	PFAM: Curli production assembly/transport component CsgF
YP_005199242.1	PFAM: Curli assembly protein CsgE
YP_005199243.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005199244.1	PFAM: Curlin associated repeat
YP_005199246.1	PFAM: Thin aggregative fimbriae synthesis protein
YP_005199247.1	PFAM: High-affinity nickel-transport protein; TIGRFAM: high-affinity nickel-transporter, HoxN/HupN/NixA family
YP_005199248.1	PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF
YP_005199249.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_005199250.1	PFAM: 4Fe-4S binding domain
YP_005199251.1	PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease
YP_005199252.1	PFAM: Formate hydrogenlyase maturation protein HycH
YP_005199253.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_005199254.1	PFAM: 4Fe-4S binding domain
YP_005199255.1	PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase
YP_005199256.1	PFAM: NADH dehydrogenase
YP_005199257.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005199258.1	PFAM: 4Fe-4S binding domain
YP_005199259.1	PFAM: Transcriptional repressor of hyc and hyp operons
YP_005199260.1	PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA
YP_005199261.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB
YP_005199262.1	PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF
YP_005199263.1	PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD
YP_005199264.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE
YP_005199265.1	PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005199268.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005199269.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199270.1	PFAM: DNA polymerase III, theta subunit
YP_005199272.1	PFAM: Dienelactone hydrolase family
YP_005199273.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005199274.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005199275.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005199276.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_005199277.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005199278.1	PFAM: Major Facilitator Superfamily
YP_005199279.1	PFAM: Acetyltransferase (GNAT) family
YP_005199280.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_005199281.1	PFAM: Protein of unknown function (DUF3761); manually curated
YP_005199288.1	PFAM: Formate/nitrite transporter
YP_005199289.1	PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA
YP_005199290.1	PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB
YP_005199291.1	PFAM: Cytochrome C assembly protein; TIGRFAM: heme exporter protein CcmC
YP_005199292.1	PFAM: Heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD
YP_005199293.1	PFAM: CcmE
YP_005199294.1	PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF
YP_005199295.1	PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily
YP_005199296.1	PFAM: Cytochrome C biogenesis protein
YP_005199297.1	TIGRFAM: cytochrome c-type biogenesis protein CcmI
YP_005199298.1	PFAM: VacJ like lipoprotein
YP_005199299.1	PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX)
YP_005199300.1	PFAM: Protein of unknown function (DUF406); TIGRFAM: conserved hypothetical protein
YP_005199301.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; fatty oxidation complex, beta subunit FadI
YP_005199302.1	PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; TIGRFAM: fatty oxidation complex, alpha subunit FadJ
YP_005199303.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA
YP_005199304.1	PFAM: Smr domain
YP_005199305.1	PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases
YP_005199306.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_005199307.1	PFAM: Penicillin-insensitive murein endopeptidase
YP_005199308.1	PFAM: Sulfite exporter TauE/SafE
YP_005199309.1	PFAM: Protein of unknown function, DUF462
YP_005199310.1	PFAM: YfcL protein
YP_005199311.1	PFAM: Protein of unknown function (DUF752); FAD dependent oxidoreductase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain
YP_005199312.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005199313.1	PFAM: Protein of unknown function (DUF2946)
YP_005199314.1	PFAM: PepSY-associated TM helix
YP_005199315.1	PFAM: Citrate transporter
YP_005199316.1	PFAM: Rhodanese-like domain
YP_005199318.1	PFAM: EamA-like transporter family
YP_005199319.1	PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005199320.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Domain of unknown function (DUF3410); D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005199321.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain
YP_005199322.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_005199323.1	PFAM: SNARE associated Golgi protein
YP_005199324.1	PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_005199325.1	PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_005199326.1	PFAM: Sporulation related domain
YP_005199327.1	PFAM: Colicin V production protein
YP_005199328.1	PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_005199329.1	PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases
YP_005199330.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_005199331.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199332.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199333.1	PFAM: ABC transporter
YP_005199334.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T
YP_005199335.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005199336.1	PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein
YP_005199337.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005199338.1	PFAM: NUDIX domain
YP_005199339.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005199340.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005199341.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit
YP_005199342.1	PFAM: PTS system sugar-specific permease component
YP_005199343.1	PFAM: Transketolase, thiamine diphosphate binding domain
YP_005199344.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005199345.1	PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_005199346.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_005199347.1	PFAM: Protein of unknown function, DUF412
YP_005199348.1	PFAM: YfbU domain
YP_005199349.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005199350.1	PFAM: Citrate transporter; TrkA-C domain
YP_005199351.1	PFAM: HD domain
YP_005199352.1	PFAM: Aminotransferase class I and II
YP_005199353.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199354.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_005199355.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_005199356.1	PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase I, D subunit
YP_005199357.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit
YP_005199358.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit
YP_005199359.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G
YP_005199360.1	PFAM: NADH dehydrogenase
YP_005199361.1	PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_005199362.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_005199363.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_005199364.1	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_005199365.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_005199366.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_005199367.1	PFAM: Protein of unknown function (DUF1097)
YP_005199368.1	PFAM: Bacterial protein of unknown function (DUF883)
YP_005199369.1	PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases
YP_005199370.1	PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase
YP_005199371.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
YP_005199372.1	PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase)
YP_005199373.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoate synthase
YP_005199374.1	PFAM: AMP-binding enzyme; TIGRFAM: O-succinylbenzoate-CoA ligase
YP_005199375.1	PFAM: Catalase; Catalase-related immune-responsive
YP_005199376.1	PFAM: YfaZ precursor
YP_005199377.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; molybdenum cofactor synthesis domain
YP_005199378.1	PFAM: Integrase core domain
YP_005199380.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_005199381.1	PFAM: Ribonucleotide reductase, small chain
YP_005199382.1	PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit
YP_005199383.1	PFAM: Autotransporter beta-domain; Chlamydia polymorphic membrane protein (Chlamydia_PMP); TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat; Chlamydial polymorphic outer membrane protein repeat
YP_005199384.1	PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase
YP_005199385.1	PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit
YP_005199386.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; RcsC Alpha-Beta-Loop (ABL); manually curated
YP_005199388.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005199389.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain
YP_005199391.1	PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family
YP_005199392.1	PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ATPase, LssB family
YP_005199393.1	PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family
YP_005199394.1	PFAM: Sel1 repeat
YP_005199395.1	PFAM: Gram-negative porin
YP_005199396.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005199397.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_005199398.1	PFAM: DinI-like family
YP_005199399.1	PFAM: Sulfatase; Domain of unknown function (DUF3413)
YP_005199400.1	PFAM: Protein of unknown function (DUF1414)
YP_005199401.1	PFAM: 37-kD nucleoid-associated bacterial protein
YP_005199402.1	PFAM: Ribosomal L25p family
YP_005199403.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_005199404.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_005199405.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein
YP_005199407.1	PFAM: Integrase core domain
YP_005199408.1	PFAM: Major Facilitator Superfamily
YP_005199409.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005199410.1	PFAM: short chain dehydrogenase
YP_005199411.1	PFAM: short chain dehydrogenase
YP_005199412.1	PFAM: Cytochrome c
YP_005199413.1	PFAM: GMC oxidoreductase; FAD dependent oxidoreductase
YP_005199414.1	PFAM: Membrane bound FAD containing D-sorbitol dehydrogenase
YP_005199416.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005199417.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199418.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199419.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005199420.1	PFAM: EAL domain
YP_005199421.1	PFAM: NlpC/P60 family
YP_005199422.1	PFAM: PAP2 superfamily
YP_005199423.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain
YP_005199425.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005199426.1	PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain
YP_005199427.1	PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; elongation factor P-like protein YeiP
YP_005199428.1	PFAM: Uncharacterised protein family (UPF0153)
YP_005199429.1	PFAM: Major Facilitator Superfamily; TIGRFAM: sugar efflux transporter
YP_005199430.1	PFAM: PTS HPr component phosphorylation site; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_005199431.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family
YP_005199432.1	PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component
YP_005199433.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_005199434.1	PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein
YP_005199435.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199436.1	PFAM: Amino acid permease
YP_005199437.1	PFAM: FecCD transport family
YP_005199438.1	PFAM: ABC transporter
YP_005199439.1	PFAM: HAD superfamily, subfamily IIIB (Acid phosphatase); TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family
YP_005199440.1	PFAM: Gram-negative porin
YP_005199441.1	PFAM: DEAD_2; DEAD/DEAH box helicase
YP_005199442.1	PFAM: Glycosyl transferase family, helical bundle domain
YP_005199443.1	PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA
YP_005199444.1	PFAM: Peptidase family M3
YP_005199445.1	PFAM: Flavin reductase like domain
YP_005199446.1	PFAM: Protein of unknown function (DUF890)
YP_005199448.1	PFAM: ABC transporter
YP_005199449.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199450.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_005199451.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family
YP_005199452.1	PFAM: Ferritin-like domain
YP_005199453.1	PFAM: Anti-sigma-K factor rskA
YP_005199454.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005199455.1	PFAM: Fasciclin domain
YP_005199456.1	PFAM: EamA-like transporter family
YP_005199457.1	PFAM: Enterobacterial Ail/Lom protein
YP_005199458.1	PFAM: Oxidoreductase molybdopterin binding domain
YP_005199459.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_005199461.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator
YP_005199462.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase
YP_005199463.1	PFAM: Sulfatase; Domain of unknown function (DUF1705)
YP_005199465.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_005199466.1	PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: transcriptional repressor BetI
YP_005199467.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase
YP_005199468.1	PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase
YP_005199469.1	PFAM: Acetyltransferase (GNAT) family
YP_005199470.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199471.1	PFAM: Protein of unknown function, DUF606
YP_005199472.1	PFAM: Protein of unknown function, DUF606
YP_005199473.1	PFAM: RES domain
YP_005199474.1	PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family
YP_005199475.1	PFAM: Nucleoside-specific channel-forming protein, Tsx
YP_005199476.1	PFAM: ABC transporter
YP_005199477.1	PFAM: MoeZ/MoeB domain; ThiF family; TIGRFAM: molybdopterin synthase sulfurylase MoeB
YP_005199478.1	PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_005199479.1	PFAM: DeoR-like helix-turn-helix domain
YP_005199480.1	PFAM: Major Facilitator Superfamily
YP_005199481.1	PFAM: Asparaginase
YP_005199482.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005199483.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005199484.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199485.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199486.1	PFAM: Putative esterase; TIGRFAM: S-formylglutathione hydrolase
YP_005199487.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
YP_005199488.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199489.1	PFAM: Protein of unknown function (DUF1228)
YP_005199490.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_005199491.1	PFAM: Protein of unknown function (DUF418)
YP_005199493.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005199494.1	PFAM: family
YP_005199495.1	PFAM: ABC transporter
YP_005199496.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005199497.1	PFAM: DUF218 domain
YP_005199498.1	PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_005199499.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homodimeric
YP_005199500.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_005199501.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199502.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199503.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_005199504.1	PFAM: ABC transporter
YP_005199506.1	PFAM: Domain of unknown function (DUF74)
YP_005199507.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_005199508.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005199509.1	PFAM: NAD dependent epimerase/dehydratase family; Protein of unknown function (DUF2867)
YP_005199510.1	PFAM: Beta-eliminating lyase
YP_005199511.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005199512.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005199513.1	PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase
YP_005199514.1	PFAM: Membrane protein of unknown function (DUF340)
YP_005199515.1	PFAM: Protein of unknown function (DUF2813)
YP_005199516.1	PFAM: Protein of unknown function (DUF535)
YP_005199517.1	PFAM: 'Cold-shock' DNA-binding domain; TIGRFAM: cold shock domain protein CspD
YP_005199518.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS
YP_005199519.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA
YP_005199520.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_005199521.1	PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_005199522.1	PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: thiol reductant ABC exporter, CydC subunit
YP_005199523.1	PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: thiol reductant ABC exporter, CydD subunit
YP_005199524.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_005199525.1	PFAM: AsnC family
YP_005199526.1	PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_005199527.1	PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA
YP_005199528.1	PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA)
YP_005199529.1	PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase
YP_005199530.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases
YP_005199531.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence
YP_005199532.1	PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit
YP_005199533.1	PFAM: DMSO reductase anchor subunit (DmsC)
YP_005199534.1	PFAM: Nitrate reductase delta subunit
YP_005199535.1	TIGRFAM: ferredoxin-type protein NapF
YP_005199536.1	PFAM: Major Facilitator Superfamily
YP_005199537.1	PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme
YP_005199538.1	PFAM: Phage integrase family
YP_005199540.1	PFAM: Regulatory phage protein cox
YP_005199543.1	PFAM: Protein of unknown function (DUF2732)
YP_005199544.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family
YP_005199546.1	PFAM: Bacteriophage replication gene A protein (GPA)
YP_005199547.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_005199548.1	PFAM: Phosphoribosyl transferase domain; Topoisomerase DNA binding C4 zinc finger; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005199550.1	PFAM: Phage portal protein; TIGRFAM: phage portal protein, PBSX family
YP_005199551.1	PFAM: Phage capsid scaffolding protein (GPO) serine peptidase
YP_005199552.1	PFAM: Phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family
YP_005199553.1	PFAM: Phage small terminase subunit
YP_005199554.1	PFAM: Phage head completion protein (GPL)
YP_005199555.1	PFAM: Phage Tail Protein X
YP_005199557.1	PFAM: Phage lysozyme
YP_005199558.1	TIGRFAM: phage lysis regulatory protein, LysB family
YP_005199559.1	PFAM: P2 phage tail completion protein R (GpR)
YP_005199560.1	PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein
YP_005199562.1	PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V
YP_005199563.1	PFAM: Gene 25-like lysozyme
YP_005199564.1	PFAM: Baseplate J-like protein
YP_005199565.1	PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein, P2 protein I family
YP_005199566.1	PFAM: Phage tail fibre repeat
YP_005199567.1	PFAM: Caudovirales tail fibre assembly protein
YP_005199568.1	PFAM: Phage tail sheath protein
YP_005199569.1	PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family
YP_005199570.1	PFAM: Phage tail protein E
YP_005199571.1	PFAM: Phage P2 GpE; manually curated; non-canonical start codon
YP_005199572.1	PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region
YP_005199573.1	PFAM: Phage P2 GpU
YP_005199574.1	PFAM: Phage late control gene D protein (GPD)
YP_005199575.1	PFAM: Ogr/Delta-like zinc finger
YP_005199576.1	PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1
YP_005199577.1	PFAM: Formate/nitrite transporter; TIGRFAM: formate transporter FocA; formate/nitrite transporter
YP_005199578.1	PFAM: YcaO-like family; TIGRFAM: uncharacterized domain
YP_005199579.1	PFAM: Protein of unknown function (DUF421)
YP_005199580.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase
YP_005199581.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_005199582.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_005199583.1	PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_005199584.1	PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit
YP_005199585.1	PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; manually curated
YP_005199586.1	PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA
YP_005199587.1	PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase
YP_005199588.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005199589.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005199590.1	PFAM: Protein of unknown function (DUF1006)
YP_005199591.1	PFAM: Trm112p-like protein
YP_005199592.1	PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_005199593.1	PFAM: Phosphotransferase enzyme family
YP_005199594.1	PFAM: DUF218 domain
YP_005199595.1	PFAM: Methyltransferase domain
YP_005199596.1	PFAM: KicB killing factor
YP_005199597.1	PFAM: MukE-like family
YP_005199598.1	PFAM: MukB N-terminal
YP_005199599.1	PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain
YP_005199600.1	PFAM: Bacterial protein of unknown function (DUF882)
YP_005199601.1	PFAM: Metallo-beta-lactamase superfamily
YP_005199602.1	PFAM: Aminotransferase class I and II
YP_005199603.1	PFAM: Gram-negative porin
YP_005199604.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase
YP_005199605.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase
YP_005199606.1	PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type
YP_005199607.1	PFAM: Transposase IS200 like; manually curated
YP_005199608.1	PFAM: ABC transporter
YP_005199609.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199610.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent
YP_005199611.1	PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family
YP_005199612.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: FMN reductase, SsuE family
YP_005199613.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2
YP_005199614.1	PFAM: Protein of unknown function (DUF1379)
YP_005199615.1	PFAM: MOSC N-terminal beta barrel domain; 2Fe-2S iron-sulfur cluster binding domain; MOSC domain
YP_005199616.1	PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain
YP_005199617.1	PFAM: ABC transporter
YP_005199618.1	PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family
YP_005199619.1	PFAM: mce related protein
YP_005199620.1	PFAM: Protein of unknown function (DUF330)
YP_005199621.1	PFAM: Ribosome modulation factor
YP_005199622.1	PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA
YP_005199623.1	PFAM: Lon protease (S16) C-terminal proteolytic domain
YP_005199624.1	PFAM: Organiser of macrodomain of Terminus of chromosome
YP_005199625.1	PFAM: OmpA-like transmembrane domain; OmpA family
YP_005199626.1	PFAM: Cell division inhibitor SulA; TIGRFAM: cell division inhibitor SulA
YP_005199627.1	PFAM: TfoX N-terminal domain; TfoX C-terminal domain
YP_005199628.1	PFAM: Fusaric acid resistance protein family; TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical membrane protein, TIGR01666
YP_005199629.1	PFAM: Domain of unknown function (DUF307)
YP_005199630.1	PFAM: UvrD/REP helicase; DNA helicase IV / RNA helicase N terminal
YP_005199631.1	PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase
YP_005199632.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2057)
YP_005199633.1	PFAM: CoA binding domain
YP_005199634.1	PFAM: Hemimethylated DNA-binding protein YccV like; TIGRFAM: hemimethylated DNA binding domain
YP_005199635.1	PFAM: S-adenosylmethionine-dependent methyltransferase
YP_005199636.1	PFAM: Acylphosphatase
YP_005199637.1	PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family
YP_005199638.1	PFAM: Uncharacterised protein family UPF0005
YP_005199639.1	manually curated
YP_005199640.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005199641.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005199642.1	PFAM: Bacterial extracellular solute-binding protein
YP_005199643.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199644.1	PFAM: ABC transporter
YP_005199645.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue
YP_005199646.1	PFAM: Cupin domain
YP_005199647.1	PFAM: SmpA / OmlA family
YP_005199649.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005199650.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component
YP_005199652.1	PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; Transporter associated domain
YP_005199654.1	PFAM: FAD dependent oxidoreductase
YP_005199655.1	PFAM: Cupin domain; Helix-turn-helix
YP_005199656.1	PFAM: Peptidase C26
YP_005199657.1	PFAM: Glutamine synthetase, catalytic domain
YP_005199659.1	PFAM: Amino acid permease
YP_005199660.1	PFAM: Exonuclease; Exonuclease C-terminal
YP_005199661.1	PFAM: Fusaric acid resistance protein family
YP_005199662.1	PFAM: Protein of unknown function (DUF496)
YP_005199663.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005199664.1	PFAM: ABC transporter; TOBE domain
YP_005199665.1	PFAM: Bacterial extracellular solute-binding protein
YP_005199666.1	PFAM: Binding-protein-dependent transport system inner membrane component; TM2 domain
YP_005199667.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199668.1	PFAM: Glycosyl hydrolase family 53
YP_005199669.1	PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase
YP_005199670.1	PFAM: phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component
YP_005199671.1	PFAM: LamB porin
YP_005199672.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005199673.1	PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234)
YP_005199674.1	PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG
YP_005199675.1	PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX
YP_005199676.1	PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit
YP_005199677.1	PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit
YP_005199678.1	PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein
YP_005199679.1	PFAM: Citrate lyase ligase C-terminal domain; TIGRFAM: [citrate (pro-3S)-lyase] ligase; cytidyltransferase-related domain
YP_005199680.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_005199681.1	PFAM: 2-hydroxycarboxylate transporter family
YP_005199683.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005199684.1	PFAM: Response regulator receiver domain; Transcriptional regulator
YP_005199685.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005199686.1	PFAM: Bacterial AMP nucleoside phosphorylase N-terminus; Phosphorylase superfamily; TIGRFAM: AMP nucleosidase
YP_005199687.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005199688.1	PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter
YP_005199689.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005199690.1	PFAM: C4-dicarboxylate anaerobic carrier
YP_005199691.1	PFAM: BadF/BadG/BcrA/BcrD ATPase family
YP_005199694.1	PFAM: ROK family
YP_005199695.1	PFAM: pfkB family carbohydrate kinase
YP_005199696.1	PFAM: SIS domain
YP_005199697.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_005199698.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005199699.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_005199700.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005199701.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005199702.1	PFAM: AcrB/AcrD/AcrF family
YP_005199703.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005199704.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005199705.1	PFAM: short chain dehydrogenase
YP_005199706.1	PFAM: short chain dehydrogenase
YP_005199708.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005199715.1	PFAM: Restriction endonuclease
YP_005199716.1	PFAM: Domain of unknown function (DUF1738)
YP_005199717.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); manually curated
YP_005199720.1	PFAM: Protein kinase domain
YP_005199730.1	PFAM: Pentapeptide repeats (8 copies)
YP_005199731.1	PFAM: Nucleotidyltransferase domain
YP_005199735.1	PFAM: TrbM
YP_005199736.1	PFAM: Type II/IV secretion system protein; TIGRFAM: P-type DNA transfer ATPase VirB11
YP_005199737.1	PFAM: Bacterial conjugation TrbI-like protein
YP_005199738.1	PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein VirB9
YP_005199739.1	PFAM: VirB8 protein
YP_005199740.1	manually curated
YP_005199741.1	PFAM: TrbL/VirB6 plasmid conjugal transfer protein
YP_005199743.1	PFAM: Type IV secretion system proteins
YP_005199744.1	PFAM: CagE, TrbE, VirB family, component of type IV transporter system; Type IV secretory pathway, VirB3-like protein; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family
YP_005199745.1	PFAM: TrbC/VIRB2 family
YP_005199746.1	PFAM: Transglycosylase SLT domain
YP_005199748.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family
YP_005199749.1	PFAM: Protein of unknown function (DUF2857)
YP_005199750.1	PFAM: Prophage CP4-57 regulatory protein (AlpA)
YP_005199751.1	manually curated
YP_005199752.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005199753.1	PFAM: Metallo-beta-lactamase superfamily
YP_005199754.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005199755.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005199756.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005199757.1	PFAM: AcrB/AcrD/AcrF family
YP_005199758.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_005199759.1	PFAM: MarR family
YP_005199760.1	PFAM: Zinc-binding dehydrogenase
YP_005199761.1	PFAM: Phage integrase family
YP_005199762.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199764.1	PFAM: Protein of unknown function (DUF466)
YP_005199765.1	PFAM: Carbon starvation protein CstA
YP_005199766.1	PFAM: LTXXQ motif
YP_005199768.1	PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II
YP_005199769.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; FGGY-family pentulose kinase
YP_005199770.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005199771.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005199772.1	PFAM: ABC transporter
YP_005199773.1	PFAM: family
YP_005199774.1	PFAM: Aminotransferase class-III; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferases
YP_005199775.1	PFAM: Arginine N-succinyltransferase beta subunit; TIGRFAM: arginine N-succinyltransferase; arginine and ornithine succinyltransferase subunits
YP_005199776.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinylglutamic semialdehyde dehydrogenase
YP_005199777.1	PFAM: Succinylarginine dihydrolase; TIGRFAM: succinylarginine dihydrolase
YP_005199778.1	PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; TIGRFAM: succinylglutamate desuccinylase
YP_005199780.1	PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial
YP_005199781.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_005199782.1	PFAM: PHP domain
YP_005199783.1	PFAM: Nitrate reductase delta subunit
YP_005199784.1	PFAM: Protein of unknown function (DUF1439)
YP_005199785.1	PFAM: Glutaredoxin 2, C terminal domain; TIGRFAM: Glutaredoxin, GrxB family
YP_005199786.1	PFAM: Major Facilitator Superfamily
YP_005199787.1	PFAM: Acetyltransferase (GNAT) family
YP_005199788.1	PFAM: Protein of unknown function, DUF480
YP_005199789.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005199790.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_005199791.1	PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_005199792.1	PFAM: YecM protein
YP_005199793.1	PFAM: Aminotransferase class I and II
YP_005199794.1	PFAM: CutC family
YP_005199797.1	PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative
YP_005199798.1	PFAM: Methyltransferase domain; TIGRFAM: methyltransferase, putative
YP_005199799.1	PFAM: MAPEG family
YP_005199800.1	PFAM: Protein of unknown function DUF72
YP_005199801.1	PFAM: Isochorismatase family
YP_005199802.1	PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_005199803.1	PFAM: NUDIX domain
YP_005199804.1	PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_005199805.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_005199806.1	PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_005199807.1	PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_005199808.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005199809.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005199810.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199811.1	PFAM: short chain dehydrogenase
YP_005199812.1	PFAM: Phosphotransferase system, EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose subfamily, IIA component; PTS system, beta-glucoside-specific IIABC component
YP_005199813.1	PFAM: Glycosyl hydrolase family 1
YP_005199814.1	PFAM: CAT RNA binding domain; PRD domain
YP_005199815.1	PFAM: Amino acid permease
YP_005199816.1	PFAM: Transposase IS200 like; manually curated
YP_005199819.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_005199820.1	PFAM: short chain dehydrogenase
YP_005199821.1	PFAM: HxlR-like helix-turn-helix
YP_005199822.1	PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family
YP_005199823.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005199824.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199825.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199826.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005199828.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199829.1	PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II
YP_005199830.1	PFAM: Domain of unknown function (DUF1127)
YP_005199831.1	PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase
YP_005199832.1	PFAM: ParA/MinD ATPase like; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
YP_005199833.1	PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase
YP_005199834.1	PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase
YP_005199835.1	PFAM: AsmA family
YP_005199836.1	PFAM: CBS domain; Integral membrane protein TerC family; Transporter associated domain
YP_005199838.1	PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_005199839.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_005199840.1	PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase
YP_005199841.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form
YP_005199842.1	PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase
YP_005199843.1	PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating
YP_005199844.1	PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_005199845.1	PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_005199846.1	PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_005199847.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_005199848.1	PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase
YP_005199849.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_005199850.1	PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_005199851.1	PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase
YP_005199852.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005199853.1	PFAM: Flagellar transcriptional activator (FlhD)
YP_005199854.1	PFAM: Flagellar transcriptional activator (FlhC)
YP_005199855.1	PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA
YP_005199856.1	PFAM: OmpA family
YP_005199857.1	PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; CheY binding; Hpt domain
YP_005199858.1	PFAM: CheW-like domain
YP_005199859.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005199865.1	PFAM: Integrase core domain
YP_005199866.1	PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1
YP_005199867.1	TIGRFAM: CRISPR-associated helicase Cas3, subtype I-F/YPEST
YP_005199868.1	PFAM: CRISPR-associated protein (Cas_Csy1); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy1
YP_005199869.1	PFAM: CRISPR-associated protein (Cas_Csy2); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy2
YP_005199870.1	PFAM: CRISPR-associated protein (Cas_Csy3); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy3
YP_005199871.1	PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST
YP_005199875.1	manually curated
YP_005199876.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005199877.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005199880.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue
YP_005199881.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue
YP_005199882.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_005199883.1	PFAM: CheB methylesterase; Response regulator receiver domain
YP_005199884.1	PFAM: Response regulator receiver domain
YP_005199885.1	PFAM: Chemotaxis phosphatase, CheZ
YP_005199886.1	PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB
YP_005199887.1	PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA
YP_005199888.1	PFAM: Flagellar protein FlhE
YP_005199890.1	PFAM: FlgN protein
YP_005199891.1	PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM
YP_005199892.1	PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA
YP_005199893.1	PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB
YP_005199894.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC
YP_005199895.1	PFAM: Flagellar hook capping protein
YP_005199896.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins
YP_005199897.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins
YP_005199898.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria
YP_005199899.1	PFAM: Flagellar L-ring protein
YP_005199900.1	PFAM: Flagellar P-ring protein
YP_005199901.1	PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ
YP_005199902.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK
YP_005199903.1	PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3
YP_005199904.1	PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein
YP_005199905.1	PFAM: LrgA family
YP_005199907.1	PFAM: Integrase core domain
YP_005199908.1	PFAM: ABC transporter
YP_005199909.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005199910.1	PFAM: Acetyltransferase (GNAT) family
YP_005199911.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005199912.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_005199913.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1
YP_005199914.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family
YP_005199915.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family
YP_005199916.1	PFAM: CheW-like domain; Response regulator receiver domain
YP_005199917.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase
YP_005199918.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005199920.1	PFAM: Metallo-beta-lactamase superfamily
YP_005199921.1	PFAM: Acyltransferase family
YP_005199922.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199923.1	PFAM: MmgE/PrpD family; TIGRFAM: 2-methylcitrate dehydratase; manually curated
YP_005199926.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005199927.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005199928.1	PFAM: Protein of unknown function (DUF1656)
YP_005199929.1	PFAM: Fusaric acid resistance protein family
YP_005199930.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005199931.1	PFAM: Luciferase-like monooxygenase
YP_005199932.1	PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI
YP_005199933.1	PFAM: FAD binding domain
YP_005199934.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005199935.1	PFAM: ABC transporter
YP_005199936.1	PFAM: NMT1/THI5 like
YP_005199937.1	PFAM: Creatinine amidohydrolase
YP_005199938.1	PFAM: Endoribonuclease L-PSP
YP_005199940.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005199941.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199942.1	PFAM: NMT1/THI5 like
YP_005199943.1	PFAM: Amidohydrolase family
YP_005199944.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_005199946.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2058)
YP_005199947.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005199948.1	PFAM: short chain dehydrogenase
YP_005199949.1	PFAM: HxlR-like helix-turn-helix
YP_005199950.1	PFAM: short chain dehydrogenase
YP_005199951.1	PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_005199952.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199953.1	PFAM: Major Facilitator Superfamily
YP_005199954.1	PFAM: Dienelactone hydrolase family
YP_005199956.1	PFAM: Prolyl oligopeptidase family
YP_005199958.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor
YP_005199959.1	PFAM: Ferric iron reductase FhuF-like transporter; FhuF 2Fe-2S C-terminal domain; TIGRFAM: siderophore-iron reductase FhuF
YP_005199960.1	PFAM: FecCD transport family
YP_005199961.1	PFAM: Periplasmic binding protein
YP_005199963.1	PFAM: OsmC-like protein
YP_005199964.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005199965.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_005199966.1	PFAM: Thioredoxin
YP_005199967.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005199968.1	PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family
YP_005199969.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005199970.1	PFAM: DSBA-like thioredoxin domain
YP_005199971.1	PFAM: short chain dehydrogenase
YP_005199972.1	PFAM: Prolyl oligopeptidase family
YP_005199974.1	PFAM: EamA-like transporter family
YP_005199975.1	PFAM: Aminotransferase class I and II
YP_005199978.1	PFAM: Putative sugar-binding domain
YP_005199979.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005199980.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit
YP_005199981.1	PFAM: PTS system sugar-specific permease component
YP_005199982.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_005199983.1	PFAM: short chain dehydrogenase
YP_005199984.1	PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase
YP_005199985.1	PFAM: ABC transporter
YP_005199986.1	PFAM: family
YP_005199987.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005199988.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase
YP_005199989.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199990.1	PFAM: Endoribonuclease L-PSP
YP_005199991.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005199992.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005199993.1	PFAM: short chain dehydrogenase
YP_005199994.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; manually curated
YP_005199995.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005199996.1	PFAM: Aldo/keto reductase family
YP_005199997.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_005199998.1	PFAM: Protein of unknown function, DUF606
YP_005199999.1	PFAM: Amidohydrolase family
YP_005200000.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200001.1	PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter
YP_005200002.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005200003.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005200004.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200006.1	PFAM: alpha/beta hydrolase fold
YP_005200007.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200008.1	PFAM: Phosphoglycerate mutase family; manually curated
YP_005200009.1	PFAM: Phage integrase family
YP_005200010.1	PFAM: Helix-turn-helix domain, rpiR family
YP_005200011.1	PFAM: D-ala-D-ala dipeptidase
YP_005200012.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200013.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200014.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200015.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005200016.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005200017.1	PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_005200018.1	PFAM: Acetyltransferase (GNAT) family
YP_005200019.1	PFAM: ROK family
YP_005200020.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200021.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200022.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200023.1	PFAM: ROK family
YP_005200024.1	PFAM: MlrC C-terminus; Protein of unknown function (DUF1485)
YP_005200025.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005200026.1	PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase
YP_005200027.1	PFAM: SEC-C motif
YP_005200028.1	PFAM: Patatin-like phospholipase
YP_005200029.1	PFAM: Response regulator receiver domain
YP_005200030.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_005200031.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005200032.1	PFAM: H-NS histone family
YP_005200033.1	PFAM: Thymidine kinase
YP_005200034.1	PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase
YP_005200035.1	PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family
YP_005200037.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200038.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200039.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200040.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005200041.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005200042.1	PFAM: Protein of unknown function, DUF440
YP_005200043.1	PFAM: Phospholipase D Active site motif
YP_005200047.1	PFAM: YCII-related domain
YP_005200048.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_005200049.1	PFAM: Thioesterase superfamily
YP_005200050.1	PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A
YP_005200051.1	PFAM: Uncharacterised protein family (UPF0259)
YP_005200052.1	PFAM: Uncharacterised protein family (UPF0153)
YP_005200053.1	PFAM: OmpW family
YP_005200054.1	PFAM: Putative phospholipid-binding domain
YP_005200055.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_005200056.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_005200057.1	PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_005200058.1	PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_005200059.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_005200060.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, proteobacterial subset
YP_005200061.1	PFAM: PHP domain
YP_005200062.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_005200063.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_005200064.1	PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase
YP_005200065.1	PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase
YP_005200066.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase
YP_005200067.1	PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_005200068.1	PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase
YP_005200069.1	PFAM: short chain dehydrogenase
YP_005200071.1	PFAM: Peptidase family S49 N-terminal; Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_005200072.1	PFAM: Protein of unknown function (DUF2498)
YP_005200073.1	PFAM: Toprim domain; Topoisomerase I zinc-ribbon-like; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_005200074.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200075.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_005200076.1	PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II
YP_005200077.1	PFAM: PAP2 superfamily
YP_005200078.1	PFAM: Protein of unknown function (DUF1049)
YP_005200081.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1
YP_005200082.1	PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic
YP_005200084.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase
YP_005200085.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005200086.1	PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase
YP_005200087.1	PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family
YP_005200088.1	PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family
YP_005200089.1	PFAM: 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter
YP_005200090.1	PFAM: Alkaline phosphatase
YP_005200092.1	PFAM: Pirin
YP_005200093.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200094.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH)
YP_005200095.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200096.1	PFAM: ABC transporter
YP_005200097.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200098.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200099.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005200100.1	PFAM: Phenylalanine and histidine ammonia-lyase
YP_005200101.1	PFAM: CoA-transferase family III
YP_005200102.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_005200103.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005200104.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial
YP_005200105.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005200106.1	PFAM: EamA-like transporter family
YP_005200107.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005200108.1	PFAM: Uncharacterised protein family (UPF0093)
YP_005200109.1	PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase
YP_005200111.1	PFAM: SNARE associated Golgi protein
YP_005200112.1	PFAM: Glycosyl transferase family 2
YP_005200113.1	PFAM: L,D-transpeptidase catalytic domain
YP_005200114.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005200115.1	PFAM: HlyD family secretion protein
YP_005200116.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005200117.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_005200118.1	PFAM: O-methyltransferase
YP_005200119.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005200120.1	PFAM: Chromate transporter
YP_005200121.1	PFAM: Chromate transporter
YP_005200122.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200124.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005200125.1	PFAM: Post-segregation antitoxin CcdA
YP_005200126.1	PFAM: CcdB protein
YP_005200127.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV
YP_005200129.1	PFAM: YadA-like C-terminal region
YP_005200131.1	PFAM: EthD protein; TIGRFAM: conserved hypothetical protein
YP_005200132.1	PFAM: Sodium/hydrogen exchanger family
YP_005200133.1	PFAM: ABC 3 transport family
YP_005200134.1	PFAM: ABC transporter
YP_005200135.1	PFAM: Periplasmic solute binding protein family
YP_005200136.1	PFAM: Opacity-associated protein A N-terminal motif; Opacity-associated protein A LysM-like domain; Peptidase family M23
YP_005200137.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
YP_005200138.1	PFAM: Major Facilitator Superfamily
YP_005200139.1	PFAM: Ferric iron reductase FhuF-like transporter; Siderophore biosynthesis protein domain; IucA / IucC family
YP_005200141.1	PFAM: Pyridoxal-dependent decarboxylase conserved domain
YP_005200142.1	PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_005200143.1	PFAM: Helix-turn-helix domain, rpiR family; SIS domain
YP_005200144.1	PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_005200145.1	PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_005200146.1	PFAM: Endoribonuclease L-PSP
YP_005200147.1	PFAM: DEAD_2; DEAD/DEAH box helicase
YP_005200148.1	PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ
YP_005200149.1	PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family
YP_005200150.1	PFAM: AMP-binding enzyme
YP_005200151.1	PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D
YP_005200152.1	PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE
YP_005200153.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD
YP_005200154.1	PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC
YP_005200155.1	PFAM: YcgL domain
YP_005200156.1	TIGRFAM: lytic murein transglycosylase
YP_005200157.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_005200158.1	PFAM: Uncharacterised protein family (UPF0153)
YP_005200159.1	PFAM: Sigma-S stabilisation anti-adaptor protein
YP_005200160.1	PFAM: Domain of unknown function DUF20
YP_005200161.1	PFAM: Disulfide bond formation protein DsbB
YP_005200162.1	PFAM: Bacterial Na+/H+ antiporter B (NhaB); TIGRFAM: Na+/H+ antiporter NhaB
YP_005200163.1	PFAM: FadR C-terminal domain; Bacterial regulatory proteins, gntR family; TIGRFAM: fatty acid metabolism transcriptional regulator FadR
YP_005200164.1	PFAM: SpoVR like protein
YP_005200165.1	PFAM: alpha/beta hydrolase fold
YP_005200166.1	PFAM: FAD dependent oxidoreductase
YP_005200167.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_005200168.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein
YP_005200169.1	PFAM: NAD synthase; TIGRFAM: NAD+ synthetase
YP_005200170.1	PFAM: Protein of unknown function, DUF481
YP_005200171.1	PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type
YP_005200172.1	PFAM: Haemagluttinin repeat; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; adhesin HecA family 20-residue repeat (two copies)
YP_005200175.1	PFAM: Protein of unknown function (DUF444)
YP_005200176.1	PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain
YP_005200177.1	PFAM: MltA-interacting protein MipA
YP_005200178.1	PFAM: Aldo/keto reductase family
YP_005200179.1	PFAM: Aldose 1-epimerase
YP_005200180.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_005200181.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_005200182.1	PFAM: Protein of unknown function (DUF1315)
YP_005200183.1	PFAM: Isochorismatase family
YP_005200184.1	PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I
YP_005200185.1	PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type
YP_005200186.1	PFAM: Nitroreductase family
YP_005200187.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid
YP_005200188.1	PFAM: Protein of unknown function (DUF1496)
YP_005200189.1	PFAM: NUDIX domain; TIGRFAM: mutator mutT protein
YP_005200190.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_005200191.1	PFAM: Sigma-54 interaction domain
YP_005200192.1	PFAM: Redoxin
YP_005200193.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_005200194.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200195.1	PFAM: Major Facilitator Superfamily
YP_005200196.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200197.1	PFAM: CorA-like Mg2+ transporter protein
YP_005200199.1	PFAM: PP-loop family
YP_005200200.1	PFAM: Protein of unknown function (DUF1493)
YP_005200201.1	PFAM: Sulfotransferase family
YP_005200202.1	PFAM: Bacterial protein of unknown function (DUF903)
YP_005200203.1	PFAM: Bacterial protein of unknown function (DUF903)
YP_005200204.1	PFAM: NUDIX domain
YP_005200205.1	PFAM: Sodium:solute symporter family
YP_005200207.1	PFAM: Alginate lyase
YP_005200208.1	PFAM: Heparinase II/III-like protein
YP_005200209.1	PFAM: short chain dehydrogenase
YP_005200210.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005200211.1	PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200212.1	PFAM: Major Facilitator Superfamily
YP_005200213.1	PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain
YP_005200214.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005200215.1	PFAM: ABC transporter
YP_005200216.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005200217.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005200218.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005200220.1	PFAM: Protein of unknown function (DUF3274)
YP_005200221.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005200222.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component
YP_005200223.1	PFAM: Glycosyl hydrolase family 1
YP_005200224.1	PFAM: Cellulase (glycosyl hydrolase family 5)
YP_005200226.1	PFAM: Nitrate and nitrite sensing; ANTAR domain
YP_005200228.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein
YP_005200229.1	PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D
YP_005200230.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase [NAD(P)H], large subunit
YP_005200231.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_005200232.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_005200233.1	PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
YP_005200234.1	PFAM: Domain of unknown function (DUF333)
YP_005200235.1	PFAM: META domain
YP_005200236.1	PFAM: ABC transporter; TOBE domain
YP_005200237.1	PFAM: Bacterial extracellular solute-binding protein
YP_005200238.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200239.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200240.1	PFAM: Calcineurin-like phosphoesterase
YP_005200241.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005200242.1	PFAM: Dicarboxylate transport
YP_005200244.1	PFAM: Protein of unknown function (DUF1318)
YP_005200245.1	PFAM: Flavodoxin-like fold
YP_005200246.1	PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA
YP_005200247.1	PFAM: Trypsin
YP_005200249.1	PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase
YP_005200250.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005200251.1	PFAM: Bacterial cellulose synthase subunit
YP_005200252.1	PFAM: Cellulose synthase operon protein C C-terminus (BCSC_C)
YP_005200254.1	PFAM: N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase
YP_005200255.1	PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase
YP_005200256.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial
YP_005200257.1	PFAM: Amidohydrolase family; TIGRFAM: formiminoglutamate deiminase
YP_005200258.1	PFAM: HutD
YP_005200259.1	PFAM: NMT1/THI5 like
YP_005200260.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200261.1	PFAM: ABC transporter
YP_005200262.1	PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase
YP_005200263.1	PFAM: Urocanase; TIGRFAM: urocanate hydratase
YP_005200264.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_005200265.1	PFAM: FMN-dependent dehydrogenase
YP_005200266.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005200268.1	PFAM: Integrase core domain
YP_005200269.1	PFAM: short chain dehydrogenase
YP_005200271.1	PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_005200272.1	PFAM: ABC transporter
YP_005200273.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200274.1	PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family
YP_005200275.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200276.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005200277.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005200278.1	PFAM: ABC transporter
YP_005200279.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005200280.1	PFAM: Polysaccharide deacetylase
YP_005200281.1	PFAM: Polysaccharide deacetylase
YP_005200282.1	PFAM: MmgE/PrpD family
YP_005200283.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_005200285.1	PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_005200286.1	PFAM: Aminotransferase class I and II
YP_005200287.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, maltose and glucose-specific IIBC component; PTS system, maltose and glucose-specific subfamily, IIC component
YP_005200288.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005200289.1	PFAM: Protein of unknown function (DUF1161)
YP_005200290.1	PFAM: Protein of unknown function (DUF1283)
YP_005200291.1	PFAM: Uncharacterised BCR, YnfA/UPF0060 family
YP_005200292.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200293.1	PFAM: Permease family
YP_005200295.1	PFAM: short chain dehydrogenase
YP_005200296.1	PFAM: Aldo/keto reductase family
YP_005200297.1	PFAM: ABC transporter
YP_005200298.1	PFAM: pfkB family carbohydrate kinase
YP_005200299.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200300.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200301.1	PFAM: Bacterial extracellular solute-binding protein
YP_005200302.1	PFAM: ROK family
YP_005200303.1	PFAM: Yersinia/Haemophilus virulence surface antigen
YP_005200304.1	PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase
YP_005200305.1	PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region
YP_005200306.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: xanthine dehydrogenase, small subunit
YP_005200307.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; manually curated
YP_005200308.1	PFAM: XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC
YP_005200309.1	PFAM: ABC transporter
YP_005200310.1	PFAM: Bacterial extracellular solute-binding protein
YP_005200311.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200313.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005200314.1	PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein
YP_005200315.1	PFAM: ABC transporter
YP_005200316.1	PFAM: Bacterial protein of unknown function (DUF945)
YP_005200317.1	PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I
YP_005200318.1	PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II
YP_005200319.1	PFAM: DNA replication terminus site-binding protein (Ter protein); TIGRFAM: DNA replication terminus site-binding protein
YP_005200321.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_005200322.1	PFAM: Fic/DOC family; ASCH domain
YP_005200324.1	PFAM: Transglycosylase SLT domain
YP_005200325.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200326.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_005200327.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005200329.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005200331.1	PFAM: Competence regulator Spx (YjbD)
YP_005200332.1	PFAM: Rhodanese-like domain
YP_005200333.1	PFAM: Cysteine dioxygenase type I
YP_005200334.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200335.1	PFAM: Bacterial OB fold (BOF) protein; TIGRFAM: TIGR00156 family protein
YP_005200336.1	PFAM: Luciferase-like monooxygenase
YP_005200337.1	PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family
YP_005200338.1	PFAM: DJ-1/PfpI family
YP_005200340.1	PFAM: Pirin C-terminal cupin domain; Pirin
YP_005200341.1	PFAM: Major Facilitator Superfamily
YP_005200342.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_005200343.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit
YP_005200344.1	PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonucleases
YP_005200345.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200346.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005200347.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX
YP_005200348.1	PFAM: ApbE family
YP_005200349.1	PFAM: Smr domain
YP_005200350.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase-related protein; mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB
YP_005200352.1	PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family
YP_005200353.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_005200354.1	PFAM: Universal stress protein family
YP_005200355.1	PFAM: Transposase IS200 like
YP_005200356.1	PFAM: NAD(P) transhydrogenase beta subunit
YP_005200357.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit
YP_005200358.1	PFAM: Protein of unknown function (DUF1471)
YP_005200359.1	PFAM: Membrane dipeptidase (Peptidase family M19)
YP_005200360.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200361.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200362.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200363.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005200364.1	PFAM: ABC transporter
YP_005200365.1	PFAM: Beta-lactamase
YP_005200366.1	PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1
YP_005200367.1	PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase
YP_005200369.1	PFAM: Invasion gene expression up-regulator, SirB
YP_005200370.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_005200371.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_005200372.1	PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_005200373.1	PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB
YP_005200374.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_005200375.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_005200376.1	PFAM: Protein of unknown function (DUF2583)
YP_005200377.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_005200378.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005200379.1	PFAM: SPFH domain / Band 7 family
YP_005200380.1	PFAM: SPFH domain / Band 7 family
YP_005200381.1	PFAM: SPFH domain / Band 7 family
YP_005200382.1	PFAM: Transposase IS200 like
YP_005200383.1	PFAM: Sulfate transporter family; STAS domain
YP_005200384.1	PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_005200385.1	PFAM: Fimbrial protein
YP_005200386.1	PFAM: Fimbrial protein
YP_005200387.1	PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain
YP_005200388.1	PFAM: Fimbrial Usher protein
YP_005200389.1	PFAM: Fimbrial protein
YP_005200391.1	PFAM: HNH endonuclease
YP_005200392.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_005200393.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005200394.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005200395.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family
YP_005200396.1	PFAM: Nitroreductase family
YP_005200397.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005200398.1	PFAM: SIS domain; Helix-turn-helix domain, rpiR family
YP_005200399.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005200400.1	PFAM: Domain of unknown function (DUF1989)
YP_005200401.1	PFAM: Domain of unknown function (DUF1989)
YP_005200402.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005200403.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005200404.1	PFAM: Domain of unknown function (DUF1989)
YP_005200405.1	PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_005200406.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200407.1	PFAM: FAD binding domain; NADH:flavin oxidoreductase / NADH oxidase family; FMN-binding domain; TIGRFAM: flavocytochrome c
YP_005200408.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_005200409.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005200410.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200411.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200412.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200413.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005200414.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family
YP_005200415.1	PFAM: Ornithine cyclodeaminase/mu-crystallin family
YP_005200416.1	PFAM: Rhodanese-like domain
YP_005200417.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005200418.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200419.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005200420.1	PFAM: ABC transporter
YP_005200421.1	PFAM: family
YP_005200422.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase
YP_005200423.1	PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain
YP_005200424.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005200425.1	PFAM: ABC transporter
YP_005200426.1	PFAM: Bacterial extracellular solute-binding protein
YP_005200427.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200428.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005200430.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_005200431.1	PFAM: ROK family
YP_005200432.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200433.1	PFAM: Major Facilitator Superfamily
YP_005200434.1	PFAM: ABC transporter; TOBE domain
YP_005200435.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200436.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200437.1	PFAM: Bacterial extracellular solute-binding protein
YP_005200438.1	PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_005200439.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005200440.1	PFAM: FAD binding domain
YP_005200441.1	PFAM: C4-dicarboxylate anaerobic carrier; TIGRFAM: c4-dicarboxylate anaerobic carrier family protein
YP_005200442.1	PFAM: Protein of unknown function (DUF2569)
YP_005200443.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit
YP_005200444.1	PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit
YP_005200445.1	PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit
YP_005200446.1	PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit
YP_005200447.1	PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit
YP_005200448.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit
YP_005200449.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_005200450.1	PFAM: Protein of unknown function (DUF2501)
YP_005200451.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200452.1	PFAM: alpha/beta hydrolase fold
YP_005200453.1	PFAM: High-affinity nickel-transport protein
YP_005200454.1	PFAM: Uncharacterised BCR, COG1937
YP_005200455.1	PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator)
YP_005200456.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005200457.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005200458.1	PFAM: Protein of unknown function (DUF3442)
YP_005200460.1	PFAM: GMC oxidoreductase
YP_005200461.1	PFAM: Cytochrome c
YP_005200463.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005200464.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005200465.1	PFAM: Carboxypeptidase Taq (M32) metallopeptidase
YP_005200466.1	PFAM: Dihydrodipicolinate synthetase family
YP_005200467.1	PFAM: Ferric iron reductase FhuF-like transporter; FhuF 2Fe-2S C-terminal domain; TIGRFAM: siderophore-iron reductase FhuF
YP_005200469.1	PFAM: Sugar (and other) transporter
YP_005200470.1	PFAM: Helix-turn-helix domain, rpiR family; SIS domain
YP_005200471.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005200472.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005200473.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005200474.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005200475.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200476.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200477.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200478.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005200479.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005200480.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200481.1	PFAM: D-aminopeptidase
YP_005200482.1	PFAM: Peptidase family S58
YP_005200483.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200484.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200485.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200486.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005200487.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_005200488.1	PFAM: Protein of unknown function (DUF1611)
YP_005200489.1	PFAM: Gram-negative porin
YP_005200490.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005200493.1	PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase
YP_005200494.1	TIGRFAM: LPXTG-motif cell wall anchor domain
YP_005200495.1	PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit
YP_005200496.1	PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone
YP_005200497.1	TIGRFAM: nitrate reductase, beta subunit
YP_005200498.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit
YP_005200499.1	PFAM: CorA-like Mg2+ transporter protein
YP_005200500.1	PFAM: Voltage gated chloride channel
YP_005200501.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200502.1	PFAM: ABC transporter
YP_005200503.1	PFAM: ABC transporter
YP_005200504.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200505.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200506.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200507.1	PFAM: ChaC-like protein
YP_005200508.1	PFAM: ChaB
YP_005200509.1	PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger; calcium/proton exchanger (cax)
YP_005200510.1	PFAM: PhoH-like protein
YP_005200512.1	PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; Tat-translocated enzyme
YP_005200513.1	PFAM: Imelysin
YP_005200514.1	PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein
YP_005200515.1	PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family
YP_005200516.1	PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)
YP_005200517.1	PFAM: ABC transporter
YP_005200518.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005200519.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005200520.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family
YP_005200521.1	PFAM: Phage integrase, N-terminal SAM-like domain; TIGRFAM: flagellar regulatory protein FliZ
YP_005200522.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family
YP_005200523.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_005200524.1	PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif
YP_005200525.1	PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS
YP_005200526.1	PFAM: Flagellar protein FliT
YP_005200527.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200528.1	PFAM: Protein of unknown function (DUF2566)
YP_005200529.1	PFAM: Uncharacterized protein family UPF0057
YP_005200536.1	PFAM: Acetyltransferase (GNAT) family
YP_005200538.1	PFAM: Bestrophin
YP_005200540.1	PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE
YP_005200541.1	PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
YP_005200542.1	PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG
YP_005200543.1	PFAM: Flagellar assembly protein FliH
YP_005200544.1	PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI
YP_005200545.1	PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ
YP_005200546.1	PFAM: Flagellar hook-length control protein FliK
YP_005200547.1	PFAM: Flagellar basal body-associated protein FliL
YP_005200548.1	PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM
YP_005200549.1	PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN
YP_005200550.1	PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO
YP_005200551.1	PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP
YP_005200552.1	PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ
YP_005200553.1	PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR
YP_005200554.1	PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; 23S rRNA (uracil-5-)-methyltransferase RumB
YP_005200555.1	PFAM: Protein of unknown function (DUF2593)
YP_005200556.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200557.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200558.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit
YP_005200559.1	PFAM: Bacterial extracellular solute-binding protein
YP_005200560.1	PFAM: Putative bacterial sensory transduction regulator
YP_005200561.1	PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family
YP_005200562.1	PFAM: Nitroreductase family
YP_005200563.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxA family
YP_005200564.1	PFAM: Putative inner membrane protein of Enterobacteriaceae
YP_005200565.1	PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain
YP_005200568.1	PFAM: Acetyltransferase (GNAT) family
YP_005200569.1	PFAM: PAP2 superfamily
YP_005200570.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_005200571.1	PFAM: GlpM protein
YP_005200572.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200573.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005200574.1	PFAM: Sugar (and other) transporter
YP_005200575.1	PFAM: Glucose / Sorbosone dehydrogenase
YP_005200576.1	PFAM: family
YP_005200577.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005200578.1	PFAM: Glycosyl hydrolases family 31
YP_005200579.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200580.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005200581.1	PFAM: ABC transporter; TIGRFAM: D-xylose ABC transporter, ATP-binding protein
YP_005200582.1	PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein
YP_005200583.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase
YP_005200584.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase
YP_005200585.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_005200586.1	PFAM: DeoC/LacD family aldolase
YP_005200588.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005200589.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005200590.1	PFAM: ABC transporter
YP_005200591.1	PFAM: Putative sugar-binding domain
YP_005200592.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_005200594.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005200595.1	PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A)
YP_005200596.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005200597.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_005200598.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus
YP_005200599.1	PFAM: short chain dehydrogenase
YP_005200600.1	PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)
YP_005200602.1	PFAM: Copper binding periplasmic protein CusF
YP_005200603.1	PFAM: Outer membrane efflux protein
YP_005200604.1	TIGRFAM: RND family efflux transporter, MFP subunit
YP_005200605.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_005200606.1	PFAM: Integrase core domain
YP_005200608.1	PFAM: Mechanosensitive ion channel; Protein of unknown function (DUF3772)
YP_005200610.1	PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: cyclic peptide transporter
YP_005200611.1	PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter
YP_005200612.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200613.1	PFAM: Protein of unknown function (DUF445)
YP_005200614.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005200616.1	PFAM: Periplasmic glucan biosynthesis protein, MdoG
YP_005200617.1	PFAM: CoA-transferase family III
YP_005200618.1	PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200619.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2264)
YP_005200620.1	PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter
YP_005200621.1	PFAM: Glycosyl Hydrolase Family 88
YP_005200622.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005200623.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue
YP_005200624.1	PFAM: Dextransucrase DSRB
YP_005200625.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005200626.1	PFAM: Ion transport protein
YP_005200628.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005200629.1	PFAM: Domain of unknown function DUF20
YP_005200630.1	PFAM: Protein of unknown function (DUF969)
YP_005200631.1	PFAM: Protein of unknown function (DUF979)
YP_005200632.1	PFAM: Protein of unknown function (DUF2891)
YP_005200633.1	TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_005200634.1	PFAM: Sulfatase; Domain of unknown function (DUF1705)
YP_005200635.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200636.1	PFAM: Phenolic acid decarboxylase (PAD)
YP_005200637.1	PFAM: alpha/beta hydrolase fold
YP_005200638.1	PFAM: EAL domain; manually curated
YP_005200639.1	PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator
YP_005200640.1	PFAM: Phage integrase family
YP_005200641.1	PFAM: Acyltransferase family
YP_005200642.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005200643.1	PFAM: Glycosyl transferase family 2
YP_005200647.1	PFAM: Autoinducer synthetase
YP_005200648.1	PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain
YP_005200649.1	PFAM: TrbM
YP_005200655.1	TIGRFAM: TIGR02646 family protein
YP_005200658.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005200659.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005200660.1	PFAM: Integrase core domain; manually curated
YP_005200661.1	PFAM: Barstar (barnase inhibitor)
YP_005200666.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_005200667.1	PFAM: Membrane transport protein
YP_005200668.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005200670.1	PFAM: Fels-1 Prophage Protein-like
YP_005200671.1	PFAM: Inclusion body protein
YP_005200672.1	PFAM: Protein of unknown function (DUF3442); Invasin, domain 3
YP_005200674.1	PFAM: Bacterial Ig-like domain (group 1)
YP_005200678.1	PFAM: Response regulator receiver domain
YP_005200679.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain
YP_005200680.1	PFAM: Protein of unknown function (DUF1401)
YP_005200681.1	PFAM: Putative lysophospholipase
YP_005200682.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200683.1	PFAM: AsnC family
YP_005200684.1	PFAM: LysE type translocator
YP_005200685.1	PFAM: short chain dehydrogenase
YP_005200686.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005200687.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005200690.1	PFAM: alpha/beta hydrolase fold
YP_005200691.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200692.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YP_005200693.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005200694.1	PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_005200696.1	PFAM: Thymidylate kinase; manually curated
YP_005200697.1	PFAM: HxlR-like helix-turn-helix
YP_005200698.1	PFAM: short chain dehydrogenase
YP_005200701.1	PFAM: Methyltransferase domain
YP_005200702.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005200703.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200704.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005200705.1	PFAM: Acetyltransferase (GNAT) family
YP_005200706.1	PFAM: Barstar (barnase inhibitor)
YP_005200707.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005200708.1	PFAM: Aldehyde dehydrogenase family
YP_005200709.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005200710.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family
YP_005200712.1	For manual analysis, pseudo or ribosomal slippage, gene with one frameshift, more than 80% of the length of the second shortest homolog; manually curated
YP_005200713.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005200714.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005200716.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005200717.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005200718.1	PFAM: MltA-interacting protein MipA
YP_005200721.1	TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005200722.1	PFAM: Insecticide toxin TcdB middle/C-terminal region; Insecticide toxin TcdB middle/N-terminal region; Salmonella virulence plasmid 65kDa B protein
YP_005200724.1	PFAM: Salmonella virulence plasmid 28.1kDa A protein
YP_005200725.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200726.1	TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005200727.1	TIGRFAM: RHS repeat-associated core domain
YP_005200728.1	PFAM: Insecticide toxin TcdB middle/C-terminal region; Insecticide toxin TcdB middle/N-terminal region; Salmonella virulence plasmid 65kDa B protein
YP_005200730.1	PFAM: Salmonella virulence plasmid 28.1kDa A protein
YP_005200731.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200732.1	PFAM: ABC transporter; NIL domain
YP_005200733.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_005200734.1	PFAM: Sulfatase
YP_005200735.1	PFAM: ABC transporter
YP_005200736.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_005200737.1	PFAM: Domain of unknown function (DUF3382); Branched-chain amino acid transport system / permease component
YP_005200738.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005200739.1	PFAM: Receptor family ligand binding region
YP_005200740.1	PFAM: Bacterial protein of unknown function (DUF903)
YP_005200741.1	PFAM: Delta-aminolevulinic acid dehydratase
YP_005200742.1	PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region
YP_005200743.1	PFAM: HlyD family secretion protein
YP_005200745.1	PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein
YP_005200746.1	PFAM: VRR-NUC domain
YP_005200747.1	PFAM: Protein of unknown function (DUF3396)
YP_005200748.1	PFAM: Protein of unknown function (DUF3396)
YP_005200749.1	PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein
YP_005200750.1	PFAM: YcjX-like family, DUF463
YP_005200751.1	PFAM: Phage shock protein PspD (Phageshock_PspD); TIGRFAM: phage shock protein PspD
YP_005200752.1	PFAM: PspC domain; TIGRFAM: phage shock protein C
YP_005200753.1	PFAM: Phage shock protein B; TIGRFAM: phage shock protein B
YP_005200754.1	PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A
YP_005200755.1	PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: psp operon transcriptional activator PspF
YP_005200756.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200757.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200758.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005200759.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005200760.1	PFAM: ABC transporter
YP_005200761.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain
YP_005200762.1	PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial
YP_005200764.1	PFAM: GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005200765.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200767.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005200768.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_005200769.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005200770.1	PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: pyridoxal kinase
YP_005200771.1	PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_005200772.1	PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase
YP_005200773.1	PFAM: Membrane-bound lysozyme-inhibitor of c-type lysozyme
YP_005200774.1	PFAM: Uncharacterised protein family (UPF0075)
YP_005200775.1	PFAM: Rickettsia 17 kDa surface antigen
YP_005200776.1	PFAM: MarR family
YP_005200777.1	PFAM: Protein of unknown function (DUF1656)
YP_005200778.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005200779.1	PFAM: Fusaric acid resistance protein family
YP_005200780.1	PFAM: Aldo/keto reductase family
YP_005200781.1	PFAM: Protein of unknown function (DUF1289)
YP_005200782.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005200783.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase
YP_005200784.1	PFAM: Exonuclease; TIGRFAM: ribonuclease T
YP_005200785.1	PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family
YP_005200786.1	PFAM: NlpC/P60 family
YP_005200787.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005200788.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005200789.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein
YP_005200790.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_005200791.1	PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_005200792.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005200793.1	PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_005200794.1	PFAM: Repeated sequence found in lipoprotein LPP
YP_005200795.1	PFAM: L,D-transpeptidase catalytic domain
YP_005200796.1	PFAM: Fe-S metabolism associated domain
YP_005200797.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_005200798.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD
YP_005200799.1	PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_005200800.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_005200801.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: FeS assembly scaffold SufA; Iron-sulfur cluster assembly accessory protein
YP_005200803.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005200804.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_005200806.1	PFAM: Domain of unknown function DUF20
YP_005200807.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase
YP_005200808.1	PFAM: Domain of unknown function (DUF299)
YP_005200809.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005200810.1	PFAM: Haemin-degrading HenS.ChuX domain
YP_005200811.1	PFAM: Periplasmic binding protein
YP_005200812.1	PFAM: FecCD transport family
YP_005200813.1	PFAM: ABC transporter
YP_005200814.1	PFAM: Uncharacterized ACR, YdiU/UPF0061 family
YP_005200815.1	PFAM: EAL domain
YP_005200816.1	PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase
YP_005200817.1	PFAM: NlpC/P60 family
YP_005200818.1	PFAM: EamA-like transporter family
YP_005200819.1	PFAM: EamA-like transporter family
YP_005200820.1	PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_005200821.1	PFAM: Polysaccharide deacetylase
YP_005200822.1	PFAM: NAD dependent epimerase/dehydratase family; Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_005200823.1	PFAM: Glycosyl transferase family 2
YP_005200824.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005200825.1	PFAM: ABC transporter
YP_005200826.1	PFAM: Glutathione peroxidase
YP_005200827.1	PFAM: FecCD transport family
YP_005200828.1	PFAM: Protein of unknown function (DUF2502)
YP_005200830.1	PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit
YP_005200831.1	PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_005200832.1	PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_005200833.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_005200834.1	PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; manually curated; non-canonical start codon
YP_005200835.1	PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase
YP_005200836.1	PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family
YP_005200837.1	PFAM: Transglycosylase SLT domain
YP_005200838.1	PFAM: Fructosamine kinase
YP_005200840.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_005200841.1	PFAM: KduI/IolB family
YP_005200842.1	PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase
YP_005200843.1	PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457)
YP_005200844.1	PFAM: Sodium:dicarboxylate symporter family
YP_005200845.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005200846.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005200847.1	PFAM: Peptidase family M48
YP_005200848.1	PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_005200849.1	PFAM: ProQ/FINO family
YP_005200851.1	PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family
YP_005200852.1	PFAM: mce related protein
YP_005200853.1	PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase
YP_005200854.1	PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005200855.1	PFAM: Protein of unknown function (DUF1480)
YP_005200857.1	PFAM: ASCH domain
YP_005200858.1	PFAM: KWG Leptospira
YP_005200859.1	PFAM: KWG Leptospira
YP_005200860.1	PFAM: Domain of unknown function (DUF1883)
YP_005200861.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_005200862.1	PFAM: Extensin-like protein C-terminus
YP_005200863.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005200865.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005200866.1	PFAM: Metallo-beta-lactamase superfamily; SCP-2 sterol transfer family
YP_005200868.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; manually curated
YP_005200869.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_005200870.1	PFAM: Acetyltransferase (GNAT) family
YP_005200871.1	PFAM: Protein of unknown function (DUF2511)
YP_005200872.1	PFAM: Copper resistance protein D
YP_005200873.1	PFAM: Copper resistance protein CopC
YP_005200874.1	PFAM: Ferritin-like domain
YP_005200875.1	PFAM: DNA polymerase III, theta subunit
YP_005200876.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily
YP_005200878.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_005200880.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase
YP_005200881.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2
YP_005200882.1	PFAM: Uncharacterised protein family (UPF0181)
YP_005200883.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade
YP_005200884.1	PFAM: NUDIX domain
YP_005200885.1	PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_005200886.1	PFAM: EAL domain
YP_005200887.1	PFAM: Integral membrane protein TerC family; Transporter associated domain
YP_005200888.1	PFAM: PTS system fructose IIA component; PTS system sorbose subfamily IIB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component; PTS system, mannose/fructose/sorbose family, IIB component
YP_005200889.1	PFAM: PTS system sorbose-specific iic component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC component
YP_005200890.1	PFAM: PTS system mannose/fructose/sorbose family IID component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID component
YP_005200891.1	PFAM: Protein of unknown function (DUF986)
YP_005200892.1	PFAM: Domain of unknown function DUF
YP_005200893.1	PFAM: Methyltransferase domain
YP_005200894.1	PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family
YP_005200895.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005200896.1	PFAM: Metallo-beta-lactamase superfamily
YP_005200899.1	PFAM: Protein of unknown function (DUF2591)
YP_005200901.1	PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain
YP_005200903.1	PFAM: Protein of unknown function (DUF2766)
YP_005200904.1	PFAM: Protein of unknown function (DUF1482)
YP_005200905.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005200910.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type
YP_005200911.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase
YP_005200912.1	PFAM: NUDIX domain
YP_005200913.1	PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_005200914.1	PFAM: Protein of unknown function (DUF489)
YP_005200915.1	PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase
YP_005200916.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005200917.1	PFAM: PhoQ Sensor; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005200918.1	PFAM: Cupin superfamily protein
YP_005200919.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T
YP_005200920.1	PFAM: Sir2 family
YP_005200921.1	PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family
YP_005200922.1	PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein
YP_005200923.1	PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family
YP_005200924.1	PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_005200926.1	PFAM: XdhC and CoxI family
YP_005200927.1	PFAM: Rickettsia 17 kDa surface antigen
YP_005200928.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005200929.1	PFAM: Uncharacterised protein family (UPF0227)
YP_005200930.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_005200931.1	PFAM: Phosphotransferase enzyme family; TIGRFAM: thiamine kinase
YP_005200932.1	TIGRFAM: uncharacterized proteobacterial lipoprotein
YP_005200933.1	PFAM: Protein of unknown function (DUF1425)
YP_005200934.1	PFAM: HIT domain
YP_005200935.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-specific IIBC component; PTS system, maltose and glucose-specific subfamily, IIC component
YP_005200936.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005200937.1	PFAM: DNA polymerase III, delta subunit, C terminal; TIGRFAM: DNA polymerase III, delta' subunit
YP_005200938.1	PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_005200939.1	PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family
YP_005200940.1	PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase
YP_005200941.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_005200942.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_005200943.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005200944.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; manually curated
YP_005200945.1	PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_005200946.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_005200947.1	PFAM: Uncharacterized ACR, COG1399
YP_005200948.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_005200949.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_005200950.1	PFAM: Polyribonucleotide phosphorylase C terminal; Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_005200951.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_005200952.1	PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type
YP_005200953.1	PFAM: DinI-like family
YP_005200955.1	PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, monomeric form
YP_005200956.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005200957.1	PFAM: Domain of unknown function DUF20
YP_005200958.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005200959.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005200960.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_005200961.1	PFAM: YceI-like domain
YP_005200962.1	PFAM: Rhodanese-like domain
YP_005200963.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005200964.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
YP_005200965.1	PFAM: DoxX
YP_005200966.1	PFAM: Major Facilitator Superfamily
YP_005200968.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005200969.1	PFAM: Protein of unknown function (DUF1493)
YP_005200973.1	PFAM: Protein of unknown function (DUF1375)
YP_005200974.1	PFAM: Glycosyl transferase family 2
YP_005200975.1	PFAM: Periplasmic glucan biosynthesis protein, MdoG
YP_005200976.1	PFAM: Acyltransferase family
YP_005200977.1	PFAM: HlyD family secretion protein
YP_005200978.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005200979.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005200980.1	PFAM: Universal stress protein family
YP_005200982.1	PFAM: Protein of unknown function (DUF2502)
YP_005200987.1	PFAM: Extracytoplasmic function sigma factor YlaC
YP_005200988.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005200989.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005200990.1	PFAM: Calcineurin-like phosphoesterase
YP_005200992.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_005200993.1	PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_005200994.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005200995.1	PFAM: Protein of unknown function (DUF2594)
YP_005200997.1	PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005200998.1	PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type
YP_005201001.1	PFAM: Amino acid permease
YP_005201002.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Alpha-L-fucosidase
YP_005201003.1	PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457)
YP_005201004.1	PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region
YP_005201005.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: pyrimidine utilization protein A
YP_005201006.1	PFAM: Isochorismatase family; TIGRFAM: pyrimidine utilization protein B
YP_005201007.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; pyrimidine utilization protein C
YP_005201008.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: pyrimidine utilization protein D
YP_005201009.1	PFAM: Flavin reductase like domain; TIGRFAM: pyrimidine utilization flavin reductase protein F
YP_005201010.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease; pyrimidine utilization transport protein G
YP_005201011.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: ABC transporter substrate binding protein, KPN_01854 family
YP_005201012.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201013.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201014.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005201015.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family
YP_005201016.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase domain protein, Avi_7169 family; uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain
YP_005201018.1	PFAM: ABC transporter
YP_005201019.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005201020.1	PFAM: Acetyltransferase (GNAT) family
YP_005201021.1	PFAM: Helix-turn-helix
YP_005201022.1	PFAM: MerR family regulatory protein
YP_005201023.1	PFAM: Uncharacterized conserved protein (DUF2358)
YP_005201024.1	PFAM: short chain dehydrogenase
YP_005201025.1	PFAM: Flavin containing amine oxidoreductase
YP_005201026.1	PFAM: Protein of unknown function (DUF1365)
YP_005201027.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_005201028.1	PFAM: Protein of unknown function (DUF2878)
YP_005201031.1	PFAM: EamA-like transporter family; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter
YP_005201033.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201034.1	PFAM: ABC transporter; CBS domain
YP_005201035.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201036.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005201037.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005201038.1	PFAM: Sugar (and other) transporter
YP_005201039.1	PFAM: Suppressor of fused protein (SUFU)
YP_005201040.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_005201041.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005201043.1	PFAM: Protein of unknown function (DUF1471)
YP_005201044.1	PFAM: Protein of unknown function (DUF1471)
YP_005201045.1	PFAM: Protein of unknown function (DUF1471)
YP_005201047.1	PFAM: Phage derived protein Gp49-like (DUF891)
YP_005201049.1	PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_005201051.1	PFAM: Aldehyde dehydrogenase family
YP_005201052.1	PFAM: Cupin superfamily protein
YP_005201053.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_005201054.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_005201055.1	TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein
YP_005201056.1	PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein
YP_005201057.1	PFAM: D-lactate dehydrogenase, membrane binding; FAD binding domain
YP_005201058.1	PFAM: Protein of unknown function (DUF1282)
YP_005201061.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005201062.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005201063.1	PFAM: Dihydrouridine synthase (Dus)
YP_005201064.1	PFAM: Major Facilitator Superfamily
YP_005201066.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005201067.1	PFAM: Sugar (and other) transporter; Major Facilitator Superfamily
YP_005201068.1	PFAM: Uncharacterised protein family UPF0005
YP_005201069.1	PFAM: MoaE protein
YP_005201070.1	PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal
YP_005201071.1	PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_005201072.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain
YP_005201073.1	PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_005201075.1	PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_005201076.1	PFAM: Isochorismatase family
YP_005201077.1	PFAM: Uncharacterized conserved protein (DUF2132)
YP_005201078.1	PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_005201080.1	PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE
YP_005201081.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_005201082.1	PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC
YP_005201083.1	PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase
YP_005201084.1	PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase
YP_005201085.1	PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_005201086.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201087.1	PFAM: Aminotransferase class I and II
YP_005201088.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_005201092.1	PFAM: Zinc-binding dehydrogenase
YP_005201093.1	PFAM: DJ-1/PfpI family
YP_005201094.1	PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family
YP_005201095.1	PFAM: Pectinesterase
YP_005201096.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005201097.1	PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme
YP_005201098.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005201100.1	PFAM: Helix-turn-helix
YP_005201101.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; molybdenum ABC transporter, ATP-binding protein
YP_005201102.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein
YP_005201103.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_005201104.1	PFAM: Protein of unknown function (DUF2592)
YP_005201105.1	PFAM: TOBE domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdenum-pterin binding domain
YP_005201106.1	PFAM: ABC transporter
YP_005201108.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201109.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_005201110.1	PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1
YP_005201111.1	PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase
YP_005201112.1	PFAM: Aldose 1-epimerase; TIGRFAM: galactose mutarotase
YP_005201113.1	PFAM: psiF repeat
YP_005201114.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1
YP_005201115.1	PFAM: Acetyltransferase (GNAT) family
YP_005201116.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005201118.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005201119.1	PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC
YP_005201120.1	PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_005201121.1	TIGRFAM: tol-pal system protein YbgF
YP_005201122.1	PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein
YP_005201123.1	PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB
YP_005201124.1	PFAM: TolA C-terminal; TIGRFAM: TolA protein
YP_005201125.1	PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein
YP_005201126.1	PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein
YP_005201127.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase
YP_005201128.1	PFAM: Cyd operon protein YbgE (Cyd_oper_YbgE); TIGRFAM: cyd operon protein YbgE
YP_005201129.1	PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT
YP_005201130.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_005201131.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_005201132.1	PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_005201133.1	PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_005201134.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
YP_005201135.1	PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component
YP_005201136.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_005201137.1	PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_005201138.1	PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein
YP_005201139.1	PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit
YP_005201140.1	PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type)
YP_005201141.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_005201142.1	PFAM: Pyroglutamyl peptidase; TIGRFAM: pyroglutamyl-peptidase I
YP_005201143.1	PFAM: LamB/YcsF family
YP_005201144.1	PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain
YP_005201145.1	PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein
YP_005201146.1	PFAM: Major Facilitator Superfamily
YP_005201147.1	PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family
YP_005201148.1	PFAM: cAMP phosphodiesterases class-II
YP_005201149.1	PFAM: FAD binding domain of DNA photolyase; DNA photolyase
YP_005201150.1	PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722)
YP_005201151.1	PFAM: Protein of unknown function (DUF2517)
YP_005201152.1	PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA
YP_005201153.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit
YP_005201154.1	PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit
YP_005201155.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel His kinase sensor domain
YP_005201156.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005201157.1	PFAM: Transcriptional regulator PadR-like family
YP_005201158.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific
YP_005201159.1	PFAM: SeqA protein
YP_005201160.1	PFAM: alpha/beta hydrolase fold
YP_005201161.1	PFAM: Ribbon-helix-helix protein, copG family
YP_005201162.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005201163.1	PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain
YP_005201164.1	PFAM: Ferric uptake regulator family
YP_005201166.1	PFAM: outer membrane porin, OprD family
YP_005201167.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase
YP_005201168.1	PFAM: Phosphotransferase system, EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; phosphotransferase system, EIIB; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC component; PTS system, glucose-like IIB component; PTS system, glucose subfamily, IIA component
YP_005201169.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase
YP_005201170.1	PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_005201171.1	PFAM: ROK family; MarR family
YP_005201172.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA
YP_005201173.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_005201174.1	PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_005201175.1	PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family
YP_005201177.1	PFAM: PhoH-like protein
YP_005201178.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family
YP_005201179.1	PFAM: CBS domain; Transporter associated domain
YP_005201180.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005201181.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005201182.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005201183.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005201184.1	PFAM: ABC transporter
YP_005201185.1	PFAM: Protein of unknown function (DUF1451)
YP_005201186.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_005201187.1	PFAM: Rare lipoprotein B family
YP_005201188.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_005201189.1	PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_005201190.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein
YP_005201191.1	PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; manually curated
YP_005201192.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_005201193.1	PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; manually curated
YP_005201194.1	PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A
YP_005201195.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_005201196.1	PFAM: Protein of unknown function (DUF493)
YP_005201197.1	PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B
YP_005201198.1	PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_005201199.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_005201200.1	PFAM: ABC transporter
YP_005201201.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005201202.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005201203.1	PFAM: Carbon-nitrogen hydrolase
YP_005201205.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_005201206.1	PFAM: Acetyltransferase (GNAT) family
YP_005201207.1	PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_005201209.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005201210.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005201211.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2076)
YP_005201212.1	PFAM: Periplasmic binding protein
YP_005201213.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_005201214.1	PFAM: Polymyxin resistance protein PmrD
YP_005201215.1	PFAM: Cupin domain
YP_005201217.1	PFAM: GGDEF domain; MASE2 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005201218.1	PFAM: Cupin domain
YP_005201219.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005201220.1	PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats)
YP_005201221.1	PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family
YP_005201222.1	PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein
YP_005201224.1	PFAM: Acyltransferase family
YP_005201225.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_005201227.1	PFAM: Protein of unknown function (DUF1176)
YP_005201229.1	PFAM: Autotransporter beta-domain
YP_005201230.1	PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family
YP_005201231.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2131)
YP_005201232.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005201234.1	PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family
YP_005201235.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade
YP_005201236.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005201239.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase
YP_005201240.1	PFAM: Phospholipase/Carboxylesterase
YP_005201241.1	PFAM: Putative ATPase (DUF699); Acetyltransferase (GNAT) family; Domain of unknown function (DUF1726)
YP_005201242.1	PFAM: Protein of unknown function (DUF441)
YP_005201243.1	PFAM: Putative neutral zinc metallopeptidase
YP_005201244.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_005201245.1	PFAM: NlpB/DapX lipoprotein
YP_005201246.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_005201247.1	PFAM: Protein of unknown function (DUF3121); TIGRFAM: type VI secretion-associated protein, VC_A0118 family
YP_005201248.1	PFAM: Ogr/Delta-like zinc finger
YP_005201249.1	PFAM: Phage late control gene D protein (GPD)
YP_005201250.1	PFAM: Phage tail sheath protein
YP_005201251.1	PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family
YP_005201252.1	PFAM: Phage tail protein E
YP_005201253.1	PFAM: Phage P2 GpE; manually curated
YP_005201254.1	PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region
YP_005201255.1	PFAM: Phage P2 GpU
YP_005201256.1	PFAM: Caudovirales tail fibre assembly protein
YP_005201257.1	PFAM: Phage Tail Collar Domain
YP_005201258.1	PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein, P2 protein I family
YP_005201259.1	PFAM: Baseplate J-like protein
YP_005201260.1	PFAM: Gene 25-like lysozyme
YP_005201261.1	PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V
YP_005201262.1	PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein
YP_005201263.1	PFAM: P2 phage tail completion protein R (GpR)
YP_005201264.1	PFAM: Protein of unknown function (DUF2514)
YP_005201266.1	PFAM: Phage holin family (Lysis protein S); TIGRFAM: phage holin, lambda family
YP_005201267.1	PFAM: Phage Tail Protein X
YP_005201268.1	PFAM: Phage head completion protein (GPL)
YP_005201269.1	PFAM: Phage small terminase subunit
YP_005201270.1	PFAM: Phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family
YP_005201271.1	PFAM: Phage capsid scaffolding protein (GPO) serine peptidase
YP_005201272.1	PFAM: Terminase-like family; Putative ATPase subunit of terminase (gpP-like); manually curated
YP_005201273.1	PFAM: Phage portal protein; TIGRFAM: phage portal protein, PBSX family
YP_005201275.1	PFAM: Bacteriophage replication gene A protein (GPA)
YP_005201276.1	PFAM: C-5 cytosine-specific DNA methylase
YP_005201277.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam)
YP_005201282.1	PFAM: Helix-turn-helix
YP_005201283.1	PFAM: Phage integrase family
YP_005201286.1	PFAM: AhpC/TSA family
YP_005201287.1	PFAM: Domain of unknown function DUF20
YP_005201288.1	PFAM: Peptidase family M48
YP_005201289.1	PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin)
YP_005201290.1	PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda
YP_005201291.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_005201292.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_005201293.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_005201294.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_005201295.1	PFAM: Acetyltransferase (GNAT) family
YP_005201297.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_005201298.1	PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase
YP_005201299.1	PFAM: EAL domain; MASE1
YP_005201300.1	PFAM: Protein of unknown function (DUF2633); manually curated
YP_005201301.1	PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE)
YP_005201302.1	PFAM: GGDEF domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005201303.1	PFAM: AlkA N-terminal domain; HhH-GPD superfamily base excision DNA repair protein
YP_005201304.1	PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_005201305.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005201306.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase
YP_005201307.1	PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
YP_005201309.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_005201310.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein
YP_005201311.1	PFAM: Predicted permease
YP_005201312.1	PFAM: ABC transporter
YP_005201313.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005201314.1	PFAM: short chain dehydrogenase
YP_005201315.1	PFAM: Thioredoxin
YP_005201316.1	PFAM: SPFH domain / Band 7 family
YP_005201317.1	PFAM: NfeD-like
YP_005201318.1	PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Cu(I)-responsive transcriptional regulator
YP_005201319.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005201320.1	PFAM: GumN protein; manually curated
YP_005201321.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_005201322.1	PFAM: Major Facilitator Superfamily
YP_005201323.1	PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family
YP_005201325.1	PFAM: pfkB family carbohydrate kinase
YP_005201326.1	PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_005201327.1	PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases
YP_005201328.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein
YP_005201329.1	PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_005201330.1	PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family
YP_005201331.1	PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III tau subunit V interacting with alpha; DNA polymerase III subunits gamma and tau domain III; DNA polymerase III subunits tau domain IV DnaB-binding; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau
YP_005201332.1	PFAM: Alpha amylase, catalytic domain
YP_005201333.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_005201334.1	PFAM: Protein of unknown function (DUF454)
YP_005201335.1	PFAM: Primosomal replication protein priB and priC
YP_005201336.1	PFAM: Protein of unknown function (DUF2496)
YP_005201337.1	PFAM: Mechanosensitive ion channel
YP_005201338.1	PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family
YP_005201339.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005201340.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; manually curated
YP_005201341.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_005201342.1	PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_005201343.1	PFAM: Periplasmic solute binding protein family
YP_005201344.1	PFAM: ABC 3 transport family
YP_005201345.1	PFAM: ABC transporter
YP_005201347.1	PFAM: Biofilm formation regulator YbaJ
YP_005201348.1	PFAM: Haemolysin expression modulating protein
YP_005201349.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201350.1	PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase
YP_005201351.1	PFAM: Permease family
YP_005201352.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005201354.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_005201355.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_005201356.1	PFAM: Nitrogen regulatory protein P-II
YP_005201357.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005201358.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005201359.1	PFAM: HTH domain; AsnC family
YP_005201360.1	PFAM: Pyridoxal-phosphate dependent enzyme
YP_005201361.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005201362.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005201363.1	PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC
YP_005201364.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005201365.1	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_005201366.1	PFAM: PPIC-type PPIASE domain
YP_005201367.1	PFAM: Bacterial DNA-binding protein
YP_005201368.1	PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_005201369.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_005201370.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_005201371.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_005201372.1	PFAM: BolA-like protein
YP_005201373.1	PFAM: Prokaryotic membrane lipoprotein lipid attachment site; Uncharacterized lipoprotein
YP_005201374.1	PFAM: Major Facilitator Superfamily; TIGRFAM: AmpG-related permease
YP_005201375.1	PFAM: COX Aromatic Rich Motif; Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome o ubiquinol oxidase subunit II; cytochrome aa3 quinol oxidase, subunit II
YP_005201376.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I
YP_005201377.1	PFAM: Cytochrome c oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III
YP_005201378.1	PFAM: Prokaryotic Cytochrome C oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV
YP_005201379.1	PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_005201380.1	PFAM: Major Facilitator Superfamily
YP_005201381.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005201382.1	PFAM: Protein of unknown function (DUF520)
YP_005201383.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_005201384.1	PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein
YP_005201385.1	PFAM: Transposase IS200 like
YP_005201386.1	PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI
YP_005201387.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_005201388.1	PFAM: Polyprenyl synthetase
YP_005201389.1	PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_005201390.1	PFAM: Aldo/keto reductase family
YP_005201391.1	PFAM: Phosphatidylglycerophosphatase A
YP_005201392.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_005201393.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_005201394.1	PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_005201395.1	PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD
YP_005201396.1	PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_005201397.1	PFAM: Protein of unknown function (DUF3251)
YP_005201398.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_005201399.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_005201400.1	PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_005201401.1	PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_005201402.1	PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_005201403.1	PFAM: Protein of unknown function, DUF479
YP_005201404.1	PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family
YP_005201405.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_005201406.1	PFAM: Amino acid permease
YP_005201407.1	PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier
YP_005201408.1	PFAM: Cobalamin-independent synthase, Catalytic domain
YP_005201409.1	PFAM: Protein of unknown function (DUF1044)
YP_005201410.1	PFAM: Helix-turn-helix
YP_005201411.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); PAS fold; TIGRFAM: PAS domain S-box; phosphate regulon sensor kinase PhoR
YP_005201412.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB
YP_005201413.1	PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD
YP_005201414.1	TIGRFAM: exonuclease SbcC
YP_005201415.1	PFAM: NMT1/THI5 like
YP_005201416.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201417.1	PFAM: ABC transporter
YP_005201418.1	PFAM: ROK family
YP_005201419.1	PFAM: Putative exonuclease, RdgC
YP_005201420.1	PFAM: Protein of unknown function (DUF1255)
YP_005201421.1	PFAM: AroM protein
YP_005201422.1	PFAM: Protein of unknown function (DUF1177)
YP_005201423.1	PFAM: OPT oligopeptide transporter protein
YP_005201424.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005201426.1	PFAM: Shikimate kinase
YP_005201427.1	PFAM: Ribosomal RNA adenine dimethylase
YP_005201429.1	PFAM: Protein of unknown function (DUF1471)
YP_005201430.1	PFAM: Protein of unknown function (DUF808)
YP_005201431.1	PFAM: Methyltransferase domain
YP_005201433.1	PFAM: Acetyltransferase (GNAT) family
YP_005201434.1	PFAM: Rhodanese-like domain
YP_005201436.1	PFAM: Fatty acid desaturase
YP_005201437.1	PFAM: Histidine acid phosphatase
YP_005201438.1	PFAM: Antimicrobial peptide resistance and lipid A acylation protein PagP
YP_005201439.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form
YP_005201440.1	PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; manually curated
YP_005201441.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005201442.1	TIGRFAM: haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB
YP_005201443.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB
YP_005201444.1	PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase
YP_005201445.1	PFAM: SIS domain; Helix-turn-helix domain, rpiR family
YP_005201447.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_005201448.1	PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase
YP_005201449.1	PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_005201450.1	PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_005201451.1	PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial; manually curated
YP_005201452.1	PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_005201453.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_005201455.1	PFAM: Positive regulator of sigma(E), RseC/MucC
YP_005201456.1	PFAM: MucB/RseB family
YP_005201457.1	PFAM: Anti sigma-E protein RseA, C-terminal domain; Anti sigma-E protein RseA, N-terminal domain
YP_005201458.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE
YP_005201459.1	PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase
YP_005201460.1	PFAM: Methyltransferase small domain; manually curated
YP_005201461.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005201462.1	PFAM: Glycine radical
YP_005201463.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase
YP_005201464.1	PFAM: GrpE
YP_005201465.1	PFAM: ATP-NAD kinase
YP_005201466.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_005201467.1	PFAM: SmpA / OmlA family
YP_005201468.1	PFAM: Uncharacterised protein family (UPF0125)
YP_005201469.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005201470.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_005201472.1	PFAM: Restriction endonuclease
YP_005201474.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005201475.1	PFAM: Tagatose 6 phosphate kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
YP_005201476.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005201477.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit
YP_005201478.1	PFAM: PTS system sugar-specific permease component; TIGRFAM: PTS system, galactitol-specific IIC component
YP_005201479.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005201480.1	PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; class II aldolase, tagatose bisphosphate family
YP_005201481.1	PFAM: Acetyltransferase (GNAT) family
YP_005201482.1	PFAM: Acetyltransferase (GNAT) family
YP_005201483.1	PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005201484.1	PFAM: Acetyltransferase (GNAT) family
YP_005201485.1	PFAM: Cupin domain; Helix-turn-helix
YP_005201486.1	PFAM: Peptidase family M28
YP_005201487.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_005201488.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_005201489.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201490.1	PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family
YP_005201491.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005201492.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_005201494.1	PFAM: Bacterial extracellular solute-binding protein
YP_005201495.1	PFAM: ABC transporter; TOBE domain
YP_005201496.1	PFAM: Calcineurin-like phosphoesterase
YP_005201497.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201498.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201501.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005201502.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase
YP_005201503.1	PFAM: ROK family
YP_005201504.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_005201505.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005201506.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005201507.1	PFAM: ABC transporter
YP_005201509.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005201510.1	PFAM: short chain dehydrogenase
YP_005201511.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005201512.1	PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating)
YP_005201513.1	PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_005201514.1	PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: glycine cleavage system T protein
YP_005201515.1	PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_005201516.1	PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; manually curated
YP_005201517.1	PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24
YP_005201518.1	PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein
YP_005201519.1	PFAM: Cell division protein ZapA
YP_005201520.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_005201522.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_005201523.1	PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase
YP_005201524.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family
YP_005201525.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; manually curated
YP_005201526.1	PFAM: short chain dehydrogenase
YP_005201527.1	PFAM: Peptidase M66
YP_005201528.1	PFAM: Protein of unknown function (DUF541)
YP_005201529.1	PFAM: LysE type translocator; TIGRFAM: L-lysine exporter
YP_005201530.1	PFAM: Mechanosensitive ion channel; Conserved TM helix
YP_005201531.1	PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter
YP_005201532.1	PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain
YP_005201533.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005201534.1	PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
YP_005201535.1	PFAM: Phosphoglycerate kinase
YP_005201536.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I
YP_005201537.1	PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_005201538.1	PFAM: Peptidase family M48
YP_005201539.1	PFAM: Fimbrial protein
YP_005201540.1	PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain
YP_005201541.1	PFAM: Fimbrial Usher protein
YP_005201542.1	PFAM: Fimbrial protein
YP_005201543.1	PFAM: Fimbrial protein
YP_005201544.1	PFAM: Fimbrial protein; manually curated
YP_005201545.1	PFAM: Fimbrial protein
YP_005201546.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic
YP_005201547.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase
YP_005201548.1	PFAM: Gram-negative pili assembly chaperone, N-terminal domain
YP_005201549.1	PFAM: CS1 type fimbrial major subunit
YP_005201551.1	PFAM: CblD like pilus biogenesis initiator
YP_005201552.1	PFAM: CblD like pilus biogenesis initiator
YP_005201553.1	PFAM: Gram-negative pili assembly chaperone, N-terminal domain
YP_005201554.1	PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family
YP_005201555.1	PFAM: SprT-like family
YP_005201556.1	PFAM: Endonuclease I
YP_005201557.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_005201558.1	PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic
YP_005201559.1	PFAM: Uncharacterized ACR, COG1678
YP_005201560.1	PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF
YP_005201561.1	PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_005201562.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_005201563.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_005201564.1	PFAM: YGGT family
YP_005201565.1	PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: TIGR00251 family protein
YP_005201566.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_005201567.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_005201568.1	PFAM: Protein of unknown function (DUF2884)
YP_005201569.1	PFAM: Glutaminase; TIGRFAM: glutaminase A
YP_005201570.1	PFAM: Protein with unknown function (DUF469)
YP_005201571.1	PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_005201572.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase
YP_005201573.1	PFAM: Bacterial Fe(2+) trafficking
YP_005201574.1	PFAM: Transglycosylase SLT domain; Domain of unknown function (DUF3393)
YP_005201575.1	PFAM: Glycosyl transferases group 1
YP_005201577.1	PFAM: Glycosyl transferases group 1
YP_005201579.1	PFAM: Glycosyl transferases group 1
YP_005201581.1	PFAM: Polysaccharide biosynthesis protein
YP_005201582.1	PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family
YP_005201583.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase; manually curated
YP_005201584.1	PFAM: Polysaccharide biosynthesis/export protein; SLBB domain
YP_005201586.1	PFAM: Glycosyl transferase family 4; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase
YP_005201587.1	PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain
YP_005201589.1	PFAM: Plasmid protein of unknown function (Plasmid_RAQPRD); TIGRFAM: integrative conjugative element protein, RAQPRD family
YP_005201590.1	PFAM: S-type Pyocin
YP_005201591.1	PFAM: Colicin immunity protein / pyocin immunity protein
YP_005201592.1	PFAM: Transposase
YP_005201593.1	PFAM: Bacterial transferase hexapeptide (three repeats)
YP_005201594.1	PFAM: Acyltransferase family
YP_005201597.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_005201598.1	PFAM: Phospholipase D Active site motif
YP_005201599.1	PFAM: Uncharacterised protein family (UPF0104)
YP_005201600.1	PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters
YP_005201601.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005201602.1	PFAM: family
YP_005201603.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_005201604.1	PFAM: Glycosyl transferases group 1
YP_005201605.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005201606.1	PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_005201607.1	PFAM: Glycosyl transferase family 2
YP_005201608.1	PFAM: Polysaccharide biosynthesis protein
YP_005201609.1	PFAM: Polysaccharide pyruvyl transferase
YP_005201610.1	PFAM: Glycosyl transferases group 1
YP_005201611.1	TIGRFAM: parallel beta-helix repeat (two copies)
YP_005201613.1	PFAM: Glycosyl transferases group 1
YP_005201614.1	PFAM: Glycosyl transferases group 1
YP_005201615.1	PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family
YP_005201616.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005201617.1	PFAM: Polysaccharide biosynthesis/export protein; SLBB domain
YP_005201618.1	PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP
YP_005201619.1	PFAM: Bacterial putative lipoprotein (DUF940)
YP_005201620.1	PFAM: SLBB-domain like (DUF1017)
YP_005201621.1	PFAM: Protein of unknown function (DUF2886)
YP_005201623.1	PFAM: EAL domain
YP_005201624.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005201628.1	PFAM: Cupin domain; Helix-turn-helix
YP_005201629.1	PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_005201630.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_005201631.1	PFAM: Amino acid permease
YP_005201632.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005201633.1	PFAM: LysE type translocator
YP_005201635.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005201636.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005201637.1	PFAM: Aminotransferase class I and II
YP_005201638.1	PFAM: Chitinase class I; Carbohydrate binding domain
YP_005201639.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201640.1	PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847)
YP_005201642.1	PFAM: Glycosyl hydrolases family 18; Carbohydrate binding domain
YP_005201643.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005201644.1	PFAM: Major Facilitator Superfamily
YP_005201645.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005201646.1	TIGRFAM: DNA alkylation damage repair protein AlkB
YP_005201647.1	PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase
YP_005201648.1	PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain
YP_005201649.1	PFAM: Amino acid permease; TIGRFAM: transporter, basic amino acid/polyamine antiporter (APA) family
YP_005201650.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: glucarate dehydratase
YP_005201651.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase
YP_005201652.1	PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter
YP_005201653.1	PFAM: Putative sugar diacid recognition
YP_005201654.1	PFAM: Transposase IS200 like
YP_005201655.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_005201656.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_005201657.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_005201658.1	PFAM: Periplasmic binding protein
YP_005201659.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_005201660.1	PFAM: Voltage gated chloride channel
YP_005201661.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_005201662.1	PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain
YP_005201663.1	PFAM: FecCD transport family
YP_005201664.1	PFAM: Periplasmic binding protein
YP_005201665.1	PFAM: ABC transporter
YP_005201666.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor
YP_005201667.1	PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_005201668.1	PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter
YP_005201672.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B
YP_005201673.1	PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB
YP_005201674.1	PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase
YP_005201675.1	PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein
YP_005201676.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_005201677.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase
YP_005201678.1	PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase
YP_005201679.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_005201680.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005201681.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005201682.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_005201683.1	PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain
YP_005201684.1	PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_005201686.1	PFAM: Integrase core domain
YP_005201687.1	PFAM: ABC-2 type transporter
YP_005201688.1	PFAM: ABC transporter
YP_005201689.1	PFAM: Carbonic anhydrase
YP_005201690.1	PFAM: Protein of unknown function (DUF1493)
YP_005201693.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_005201695.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005201696.1	PFAM: Glucitol operon activator protein (GutM)
YP_005201697.1	PFAM: short chain dehydrogenase
YP_005201698.1	PFAM: PTS system glucitol/sorbitol-specific IIA component; TIGRFAM: PTS system, glucitol/sorbitol-specific IIA component
YP_005201699.1	PFAM: Sorbitol phosphotransferase enzyme II C-terminus; Sorbitol phosphotransferase enzyme II N-terminus; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC component
YP_005201700.1	PFAM: PTS system enzyme II sorbitol-specific factor; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC component
YP_005201701.1	PFAM: Multicopper oxidase
YP_005201702.1	PFAM: Bacterial chaperone lipoprotein (PulS_OutS)
YP_005201703.1	PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase
YP_005201704.1	PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form
YP_005201706.1	PFAM: EamA-like transporter family
YP_005201707.1	PFAM: Uncharacterised protein family (UPF0231)
YP_005201708.1	PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2
YP_005201710.1	PFAM: Fimbrial protein
YP_005201711.1	PFAM: Fimbrial Usher protein
YP_005201712.1	PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain
YP_005201713.1	PFAM: Fimbrial protein
YP_005201714.1	PFAM: Bacterial extracellular solute-binding protein
YP_005201715.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201716.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201717.1	PFAM: ABC transporter
YP_005201718.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_005201719.1	PFAM: ROK family
YP_005201720.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_005201721.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_005201722.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
YP_005201723.1	PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type
YP_005201724.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005201725.1	PFAM: Amino acid permease
YP_005201726.1	PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005201727.1	PFAM: Glycosyl hydrolases family 43
YP_005201728.1	PFAM: CobD/Cbib protein
YP_005201729.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_005201730.1	PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_005201731.1	PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005201732.1	PFAM: Type II/IV secretion system protein
YP_005201733.1	PFAM: Bacterial type II secretion system protein F domain
YP_005201734.1	PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: guanosine monophosphate reductase, eukaryotic
YP_005201735.1	PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_005201736.1	PFAM: Protein of unknown function (DUF1342)
YP_005201737.1	PFAM: Domain of unknown function (DUF329)
YP_005201738.1	PFAM: NUDIX domain; TIGRFAM: mutator mutT protein
YP_005201739.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_005201740.1	PFAM: Secretion monitor precursor protein (SecM)
YP_005201741.1	PFAM: Protein of unknown function (DUF721)
YP_005201742.1	PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase
YP_005201743.1	PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_005201744.1	PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_005201745.1	PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type
YP_005201746.1	PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_005201747.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_005201748.1	PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_005201749.1	PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW
YP_005201750.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_005201751.1	PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_005201752.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_005201753.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase
YP_005201754.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_005201755.1	PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL
YP_005201756.1	PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_005201757.1	PFAM: MraZ protein; TIGRFAM: mraZ protein
YP_005201758.1	PFAM: Bacterial regulatory proteins, lacI family; family; TIGRFAM: D-fructose-responsive transcription factor
YP_005201759.1	PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit
YP_005201760.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_005201761.1	PFAM: AMP-binding enzyme
YP_005201762.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201763.1	PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_005201764.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_005201765.1	PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit
YP_005201766.1	PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_005201767.1	PFAM: Major Facilitator Superfamily; TIGRFAM: sugar efflux transporter
YP_005201769.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005201770.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein
YP_005201771.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: thiamine ABC transporter, permease protein
YP_005201772.1	PFAM: ABC transporter; TIGRFAM: thiamine ABC transporter, ATP-binding protein
YP_005201773.1	PFAM: SNARE associated Golgi protein
YP_005201774.1	PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain
YP_005201775.1	PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain
YP_005201776.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005201777.1	PFAM: Transposase IS200 like
YP_005201778.1	PFAM: DnaJ domain; Tellurite resistance protein TerB
YP_005201779.1	PFAM: Organic solvent tolerance protein; OstA-like protein
YP_005201780.1	PFAM: SurA N-terminal domain; PPIC-type PPIASE domain
YP_005201781.1	PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_005201782.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_005201783.1	PFAM: Protein of unknown function (DUF525)
YP_005201784.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
YP_005201785.1	PFAM: Dihydrofolate reductase
YP_005201786.1	PFAM: Protein of unknown function (DUF1212)
YP_005201787.1	PFAM: Protein of unknown function (DUF1212)
YP_005201788.1	PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein
YP_005201789.1	PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family
YP_005201790.1	PFAM: Flavodoxin-like fold
YP_005201791.1	PFAM: Glycosyl hydrolases family 18; Chitinase A, N-terminal domain; Carbohydrate binding domain
YP_005201793.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005201794.1	PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_005201795.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_005201797.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_005201798.1	PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_005201799.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_005201800.1	PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_005201801.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase
YP_005201802.1	PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_005201803.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_005201804.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201805.1	PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA
YP_005201806.1	PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_005201807.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_005201808.1	PFAM: GPR1/FUN34/yaaH family
YP_005201809.1	PFAM: Major Facilitator Superfamily
YP_005201810.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_005201811.1	PFAM: Transaldolase; TIGRFAM: transaldolase
YP_005201812.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_005201813.1	PFAM: Protein of unknown function (DUF328)
YP_005201814.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_005201815.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase
YP_005201816.1	PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; manually curated
YP_005201817.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1
YP_005201818.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005201819.1	PFAM: CreA protein
YP_005201820.1	PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005201821.1	PFAM: Phosphoglycerate mutase family
YP_005201822.1	PFAM: Protein of unknown function DUF84; TIGRFAM: inosine/xanthosine triphosphatase
YP_005201823.1	PFAM: Trp repressor protein; TIGRFAM: trp operon repressor, proteobacterial
YP_005201824.1	PFAM: Transglycosylase SLT domain
YP_005201825.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005201826.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005201827.1	PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family
YP_005201828.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201829.1	PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: zinc-binding alcohol dehydrogenase family protein
YP_005201830.1	PFAM: Protein of unknown function (DUF2950)
YP_005201831.1	PFAM: Protein of unknown function (DUF3300)
YP_005201832.1	PFAM: Helix-turn-helix; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain
YP_005201833.1	PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA
YP_005201834.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB
YP_005201835.1	PFAM: Bacterial virulence factor haemolysin
YP_005201836.1	PFAM: Bacterial regulatory protein, arsR family; HipA-like N-terminal domain
YP_005201837.1	PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD)
YP_005201838.1	PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase
YP_005201839.1	PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase
YP_005201840.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_005201842.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005201843.1	PFAM: Patatin-like phospholipase
YP_005201844.1	PFAM: Putative phospholipid-binding domain
YP_005201846.1	PFAM: Carbohydrate binding domain
YP_005201847.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3
YP_005201848.1	PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain
YP_005201849.1	PFAM: Helix-turn-helix
YP_005201850.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase
YP_005201851.1	PFAM: DNA polymerase III psi subunit; TIGRFAM: DNA polymerase III, psi subunit
YP_005201852.1	PFAM: Methyltransferase small domain; Methyltransferase small domain N-terminal
YP_005201853.1	PFAM: Aldo/keto reductase family
YP_005201854.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005201855.1	PFAM: Protein of unknown function (DUF1435)
YP_005201856.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005201857.1	PFAM: L-rhamnose-proton symport protein (RhaT); TIGRFAM: RhaT L-rhamnose-proton symporter family protein
YP_005201858.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005201859.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005201860.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase
YP_005201861.1	PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase
YP_005201862.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: rhamnulose-1-phosphate aldolase
YP_005201863.1	PFAM: Iron-containing alcohol dehydrogenase; TIGRFAM: lactaldehyde reductase
YP_005201864.1	PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase
YP_005201865.1	PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ
YP_005201866.1	PFAM: Sulfate transporter family
YP_005201867.1	PFAM: DAK2 domain; Dak1 domain; TIGRFAM: dihydroxyacetone kinase, ATP-dependent
YP_005201868.1	PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_005201869.1	PFAM: Tryptophan/tyrosine permease family; TIGRFAM: serine transporter
YP_005201871.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005201872.1	PFAM: OmpA family
YP_005201874.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201875.1	PFAM: Alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase
YP_005201876.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, catabolic
YP_005201877.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_005201878.1	PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr
YP_005201879.1	PFAM: EcoRII C terminal; Restriction endonuclease EcoRII, N-terminal
YP_005201882.1	PFAM: Transposase IS200 like
YP_005201885.1	PFAM: alpha/beta hydrolase fold
YP_005201895.1	PFAM: Ogr/Delta-like zinc finger; For manual analysis, pseudo, good start found, extended gene length<=100aa and < 90% the length of the second longest homolog. Found common hit with non- adjoining gene: Rahaq2_00007330; manually curated
YP_005201896.1	PFAM: Beta-lactamase
YP_005201897.1	PFAM: Predicted permease YjgP/YjgQ family
YP_005201898.1	PFAM: Predicted permease YjgP/YjgQ family
YP_005201899.1	PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_005201900.1	PFAM: DNA polymerase III chi subunit, HolC
YP_005201901.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase
YP_005201902.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201903.1	PFAM: Acetyltransferase (GNAT) family
YP_005201904.1	PFAM: Helix-turn-helix domain, rpiR family; SIS domain
YP_005201905.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component
YP_005201906.1	PFAM: Glycosyl hydrolase family 1
YP_005201907.1	PFAM: Glycosyl hydrolases family 43
YP_005201908.1	PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005201909.1	PFAM: Protein of unknown function (DUF1260)
YP_005201910.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_005201911.1	PFAM: Alpha amylase, catalytic domain
YP_005201912.1	PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family
YP_005201914.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_005201915.1	PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase
YP_005201916.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_005201917.1	PFAM: C4-dicarboxylate anaerobic carrier
YP_005201918.1	PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_005201920.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_005201921.1	PFAM: Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit
YP_005201922.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_005201927.1	PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein
YP_005201928.1	PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404)
YP_005201929.1	PFAM: Bacterial domain of unknown function (DUF403)
YP_005201930.1	PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region
YP_005201931.1	PFAM: Proteasome subunit
YP_005201932.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005201933.1	PFAM: Outer membrane protein G (OmpG)
YP_005201934.1	PFAM: ABC transporter; TOBE domain
YP_005201935.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase
YP_005201936.1	PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain
YP_005201937.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005201938.1	PFAM: Xylose isomerase-like TIM barrel
YP_005201939.1	PFAM: Zinc-binding dehydrogenase
YP_005201940.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201941.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005201942.1	PFAM: Bacterial extracellular solute-binding protein
YP_005201943.1	PFAM: Alpha amylase, catalytic domain
YP_005201944.1	PFAM: Bacterial inner membrane protein
YP_005201945.1	PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus
YP_005201946.1	PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain
YP_005201947.1	PFAM: Glucuronate isomerase
YP_005201949.1	PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter
YP_005201950.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005201951.1	PFAM: SNARE associated Golgi protein
YP_005201953.1	PFAM: Protein of unknown function (DUF1090)
YP_005201954.1	PFAM: Bacterial protein of unknown function (DUF883)
YP_005201955.1	PFAM: Protein of unknown function (DUF1469)
YP_005201957.1	PFAM: DoxX
YP_005201958.1	PFAM: Glutathione S-transferase, C-terminal domain
YP_005201959.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005201960.1	PFAM: Pirin
YP_005201961.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family
YP_005201962.1	PFAM: LppC putative lipoprotein
YP_005201963.1	PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein
YP_005201964.1	PFAM: SIS domain
YP_005201965.1	PFAM: Putative phospholipid-binding domain
YP_005201966.1	PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase
YP_005201967.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005201968.1	PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_005201969.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial
YP_005201970.1	PFAM: Stringent starvation protein B
YP_005201971.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005201972.1	PFAM: Ribosomal protein S9/S16
YP_005201973.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_005201974.1	PFAM: AFG1-like ATPase
YP_005201975.1	PFAM: Protein of unknown function (DUF1043)
YP_005201976.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_005201977.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine pepetdase DegS
YP_005201978.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_005201979.1	PFAM: BolA-like protein
YP_005201980.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005201981.1	PFAM: Toluene tolerance, Ttg2
YP_005201982.1	PFAM: mce related protein
YP_005201983.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005201984.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_005201985.1	PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein
YP_005201986.1	PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein
YP_005201987.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
YP_005201988.1	PFAM: Protein of unknown function (DUF1239)
YP_005201989.1	PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; autotransporter-associated beta strand repeat
YP_005201990.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_005201991.1	PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor
YP_005201992.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_005201993.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN
YP_005201994.1	PFAM: P-loop ATPase protein family
YP_005201995.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_005201996.1	PFAM: HTH domain; Mga helix-turn-helix domain; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005201997.1	PFAM: Protein of unknown function (DUF1341); TIGRFAM: conserved hypothetical protein EF_0839/AHA_3917
YP_005201998.1	PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme
YP_005201999.1	PFAM: Amidohydrolase family; TIGRFAM: probable amidohydrolase EF_0837/AHA_3915
YP_005202000.1	TIGRFAM: conserved hypothetical protein EF_0833/AHA_3914
YP_005202001.1	TIGRFAM: conserved hypothetical protein EF_0832/AHA_3913
YP_005202002.1	TIGRFAM: conserved hypothetical protein EF_0831/AHA_3912
YP_005202003.1	TIGRFAM: conserved hypothetical protein EF_0830/AHA_3911
YP_005202004.1	PFAM: PRD domain; TIGRFAM: PRD domain protein EF_0829/AHA_3910
YP_005202005.1	PFAM: Transcription elongation factor, GreA/GreB, C-term
YP_005202008.1	PFAM: Cytochrome b562
YP_005202009.1	PFAM: Putative modulator of DNA gyrase
YP_005202010.1	PFAM: Protein of unknown function (DUF615)
YP_005202011.1	PFAM: Barstar (barnase inhibitor)
YP_005202012.1	PFAM: ribonuclease
YP_005202013.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_005202014.1	PFAM: Amino acid permease
YP_005202015.1	PFAM: Fusaric acid resistance protein family
YP_005202016.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005202017.1	PFAM: Protein of unknown function (DUF1656)
YP_005202018.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005202019.1	PFAM: Putative modulator of DNA gyrase
YP_005202020.1	TIGRFAM: TIGR02099 family protein
YP_005202021.1	PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_005202022.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_005202023.1	PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD
YP_005202024.1	PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_005202025.1	PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_005202026.1	PFAM: EAL domain; GGDEF domain
YP_005202027.1	PFAM: Oxidoreductase molybdopterin binding domain
YP_005202028.1	PFAM: Ferric reductase like transmembrane component
YP_005202029.1	PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_005202030.1	PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_005202031.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_005202033.1	PFAM: Protein of unknown function (DUF997)
YP_005202034.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; sodium/pantothenate symporter
YP_005202035.1	PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase
YP_005202036.1	PFAM: Eukaryotic-type carbonic anhydrase
YP_005202037.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family
YP_005202038.1	PFAM: Bacterial regulatory protein, Fis family
YP_005202039.1	PFAM: DoxX
YP_005202040.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
YP_005202042.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005202043.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005202044.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005202045.1	PFAM: ABC transporter
YP_005202046.1	PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein
YP_005202047.1	PFAM: LrgA family
YP_005202048.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005202049.1	PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form
YP_005202050.1	PFAM: Permease family
YP_005202051.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005202052.1	PFAM: EAL domain; GGDEF domain; Bacterial signalling protein N terminal repeat; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005202053.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005202054.1	PFAM: Inositol monophosphatase family
YP_005202055.1	PFAM: LysE type translocator
YP_005202056.1	PFAM: Periplasmic binding protein
YP_005202057.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_005202058.1	PFAM: RIO1 family
YP_005202059.1	PFAM: Male sterility protein
YP_005202060.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005202061.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005202062.1	PFAM: EamA-like transporter family
YP_005202063.1	PFAM: Tautomerase enzyme
YP_005202064.1	PFAM: PemK-like protein
YP_005202066.1	PFAM: short chain dehydrogenase
YP_005202067.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005202070.1	PFAM: FAD binding domain
YP_005202071.1	PFAM: Yersinia/Haemophilus virulence surface antigen
YP_005202072.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202074.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005202075.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_005202078.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Putative esterase
YP_005202079.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005202080.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_005202081.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_005202082.1	PFAM: Protein of unknown function (DUF419)
YP_005202083.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_005202084.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005202085.1	PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005202086.1	PFAM: Glycosyl hydrolases family 31
YP_005202087.1	PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
YP_005202088.1	PFAM: DeoC/LacD family aldolase
YP_005202089.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005202090.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase
YP_005202091.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_005202092.1	PFAM: Aminotransferase class I and II
YP_005202093.1	PFAM: short chain dehydrogenase
YP_005202094.1	PFAM: Uncharacterized BCR, YitT family COG1284
YP_005202095.1	PFAM: AsnC family
YP_005202096.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005202097.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_005202098.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_005202099.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005202100.1	PFAM: Phage shock protein G (Phageshock_PspG); TIGRFAM: phage shock protein G
YP_005202101.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A
YP_005202102.1	PFAM: Ferric uptake regulator family
YP_005202103.1	PFAM: CsbD-like
YP_005202104.1	PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_005202105.1	PFAM: Prokaryotic diacylglycerol kinase
YP_005202106.1	PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase
YP_005202107.1	PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial
YP_005202108.1	PFAM: Chorismate lyase
YP_005202109.1	PFAM: Phosphate-starvation-inducible E
YP_005202110.1	PFAM: Phosphoglucose isomerase
YP_005202111.1	PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_005202112.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter
YP_005202113.1	PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Phosphate:Na+ Symporter (PNaS) Family
YP_005202114.1	TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_005202115.1	PFAM: ABC transporter
YP_005202116.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005202117.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005202118.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_005202119.1	PFAM: Bacterial extracellular solute-binding protein
YP_005202120.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005202121.1	PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_005202122.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005202123.1	PFAM: Isocitrate dehydrogenase kinase/phosphatase (AceK)
YP_005202124.1	PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase
YP_005202125.1	PFAM: Malate synthase; TIGRFAM: malate synthase A
YP_005202126.1	PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase
YP_005202127.1	PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_005202128.1	PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_005202129.1	PFAM: Protein of unknown function (DUF1481); manually curated
YP_005202130.1	PFAM: Bacterial DNA-binding protein
YP_005202131.1	PFAM: Protein of unknown function, DUF
YP_005202132.1	PFAM: Endonuclease V
YP_005202133.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_005202134.1	PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain
YP_005202135.1	PFAM: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
YP_005202137.1	PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_005202138.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_005202139.1	PFAM: MoeZ/MoeB domain; ThiF family
YP_005202140.1	PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_005202141.1	PFAM: Thiazole biosynthesis protein ThiG
YP_005202142.1	PFAM: Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH
YP_005202143.1	PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_005202144.1	PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_005202145.1	PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_005202146.1	PFAM: Ribosomal protein L10
YP_005202147.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_005202148.1	PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_005202149.1	PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_005202150.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_005202151.1	PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_005202152.1	PFAM: Acetyltransferase (GNAT) family
YP_005202153.1	PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: pantothenate kinase, bacterial type; manually curated
YP_005202154.1	PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain
YP_005202155.1	PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_005202157.1	PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family
YP_005202158.1	PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family
YP_005202159.1	PFAM: Metallopeptidase family M24
YP_005202160.1	PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; TIGRFAM: fatty oxidation complex, alpha subunit FadB
YP_005202161.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; fatty oxidation complex, beta subunit FadA
YP_005202162.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005202163.1	PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases
YP_005202164.1	PFAM: Peptidase family S51
YP_005202165.1	PFAM: Transcription termination factor nusG; TIGRFAM: transcriptional activator RfaH
YP_005202166.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005202167.1	PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_005202168.1	TIGRFAM: twin arginine-targeting protein translocase TatB
YP_005202169.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_005202170.1	PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase
YP_005202171.1	PFAM: SCP-2 sterol transfer family
YP_005202172.1	PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_005202173.1	PFAM: RmuC family
YP_005202174.1	PFAM: SNARE associated Golgi protein
YP_005202175.1	PFAM: Phosphorylase superfamily; TIGRFAM: uridine phosphorylase
YP_005202176.1	PFAM: Catalase; Catalase-related immune-responsive
YP_005202177.1	PFAM: Dienelactone hydrolase family
YP_005202178.1	PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family
YP_005202179.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PTS HPr component phosphorylation site; PEP-utilising enzyme, N-terminal; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase System HPr (HPr) Family; PTS system, fructose subfamily, IIA component
YP_005202180.1	PFAM: Phosphotransferase system, EIIC; TIGRFAM: PTS system, fructose subfamily, IIC component
YP_005202181.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component
YP_005202182.1	PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase
YP_005202183.1	PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family
YP_005202184.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component
YP_005202185.1	PFAM: Cobalamin-independent synthase, Catalytic domain; Cobalamin-independent synthase, N-terminal domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_005202186.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005202187.1	PFAM: EamA-like transporter family; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter
YP_005202188.1	PFAM: Protein of unknown function (DUF2756)
YP_005202189.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_005202190.1	PFAM: ABC transporter; TOBE domain
YP_005202191.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005202192.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005202193.1	PFAM: Bacterial extracellular solute-binding protein
YP_005202194.1	PFAM: Aminotransferase class I and II
YP_005202195.1	PFAM: ABC transporter
YP_005202196.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_005202197.1	PFAM: Branched-chain amino acid transport system / permease component; Domain of unknown function (DUF3382)
YP_005202198.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005202199.1	PFAM: Receptor family ligand binding region
YP_005202200.1	PFAM: Acetyltransferase (GNAT) family; Acetyltransferase, GNAT family
YP_005202201.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH
YP_005202202.1	PFAM: Predicted permease; TIGRFAM: putative protein insertion permease FtsX
YP_005202203.1	PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein
YP_005202204.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_005202205.1	PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_005202206.1	PFAM: Protein of unknown function (DUF1145)
YP_005202207.1	PFAM: YhhN-like protein
YP_005202208.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005202209.1	PFAM: SirA-like protein
YP_005202210.1	PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein
YP_005202213.1	PFAM: Major Facilitator Superfamily; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter family protein
YP_005202214.1	PFAM: ABC transporter
YP_005202215.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005202216.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005202217.1	PFAM: Bacterial extracellular solute-binding protein
YP_005202218.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005202219.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005202220.1	PFAM: Alpha amylase, catalytic domain
YP_005202221.1	PFAM: Domain of unknown function (DUF377)
YP_005202222.1	PFAM: Protein of unknown function (DUF1861)
YP_005202225.1	PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type
YP_005202226.1	PFAM: Haemagluttinin repeat; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain
YP_005202227.1	PFAM: Possible hemagglutinin (DUF638)
YP_005202229.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005202230.1	PFAM: Putative lysophospholipase
YP_005202231.1	PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein
YP_005202232.1	PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein
YP_005202233.1	PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family
YP_005202234.1	PFAM: Phospholipase A1
YP_005202235.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005202236.1	PFAM: EamA-like transporter family; TIGRFAM: rarD protein
YP_005202237.1	PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication
YP_005202238.1	PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)
YP_005202239.1	PFAM: WxcM-like, C-terminal
YP_005202240.1	PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II
YP_005202241.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005202242.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC
YP_005202243.1	PFAM: Protein of unknown function, DUF484
YP_005202244.1	PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_005202245.1	Untagged, good start found, extended gene length<=100aa and >= 90% the length of the second longest homolog; manually curated
YP_005202246.1	PFAM: Adenylate cyclase, class-I
YP_005202247.1	PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_005202248.1	PFAM: Uroporphyrinogen-III synthase HemD
YP_005202249.1	PFAM: HemX
YP_005202250.1	PFAM: HemY protein N-terminus; Tetratricopeptide repeat; TIGRFAM: hemY protein
YP_005202251.1	PFAM: Amino acid permease
YP_005202252.1	PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
YP_005202253.1	PFAM: WzyE protein
YP_005202254.1	PFAM: 4-alpha-L-fucosyltransferase (Fuc4NAc transferase)
YP_005202255.1	PFAM: Polysaccharide biosynthesis protein
YP_005202256.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase
YP_005202257.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: TDP-D-fucosamine acetyltransferase
YP_005202258.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_005202259.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated
YP_005202260.1	PFAM: Chain length determinant protein
YP_005202261.1	PFAM: Glycosyl transferase family 4; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase
YP_005202262.1	PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_005202263.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005202264.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005202265.1	PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase
YP_005202266.1	PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep
YP_005202267.1	PFAM: PPIC-type PPIASE domain
YP_005202268.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_005202269.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202270.1	PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form
YP_005202271.1	PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_005202272.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I
YP_005202274.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_005202275.1	PFAM: IlvGEDA operon leader peptide; manually curated
YP_005202276.1	PFAM: Major Facilitator Superfamily
YP_005202277.1	PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_005202278.1	PFAM: Protein of unknown function, DUF
YP_005202279.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202280.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005202281.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005202282.1	PFAM: ABC transporter
YP_005202283.1	PFAM: family
YP_005202284.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_005202285.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent vitamin B12 receptor
YP_005202286.1	PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase
YP_005202287.1	PFAM: Glycosyl Hydrolase Family 88
YP_005202288.1	PFAM: Major Facilitator Superfamily
YP_005202290.1	PFAM: Protein of unknown function (DUF1422)
YP_005202291.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005202292.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005202293.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202294.1	PFAM: Glutaredoxin; Redoxin; TIGRFAM: Glutaredoxin-family domain
YP_005202295.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005202296.1	PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_005202297.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_005202298.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase (ArgE)
YP_005202299.1	PFAM: Phosphoenolpyruvate carboxylase
YP_005202300.1	PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form
YP_005202301.1	PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; Amino acid kinase family; TIGRFAM: aspartate kinase
YP_005202302.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine (thiol)-lyase
YP_005202303.1	PFAM: Met Apo-repressor, MetJ
YP_005202304.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_005202305.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'
YP_005202306.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005202307.1	PFAM: Sporulation related domain; TIGRFAM: cell division protein FtsN; manually curated
YP_005202308.1	PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit
YP_005202309.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit
YP_005202310.1	PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_005202311.1	PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy; regulator of ribonuclease activity A
YP_005202312.1	PFAM: Protein of unknown function (DUF904)
YP_005202313.1	PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins
YP_005202314.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_005202315.1	PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II
YP_005202316.1	PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein
YP_005202317.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005202318.1	PFAM: Protein of unknown function (DUF805)
YP_005202319.1	PFAM: Protein of unknown function (DUF1454)
YP_005202320.1	PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_005202321.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein
YP_005202322.1	PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase
YP_005202324.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005202325.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005202326.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_005202327.1	PFAM: Serine acetyltransferase, N-terminal; TIGRFAM: serine O-acetyltransferase
YP_005202328.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_005202329.1	PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB
YP_005202330.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family
YP_005202331.1	PFAM: Rhodanese-like domain
YP_005202332.1	PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
YP_005202333.1	PFAM: Peptidase family M23
YP_005202334.1	PFAM: Divergent polysaccharide deacetylase
YP_005202335.1	PFAM: Glycosyl transferases group 1
YP_005202337.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005202338.1	PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase
YP_005202339.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase
YP_005202340.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II
YP_005202341.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I
YP_005202342.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_005202343.1	PFAM: Glycosyl transferase family 8 C-terminal; Glycosyl transferase family 8
YP_005202345.1	PFAM: Glycosyl transferase family 2
YP_005202346.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; lipopolysaccharide heptosyltransferase II; manually curated
YP_005202347.1	PFAM: Glycosyl transferases group 1
YP_005202348.1	PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
YP_005202349.1	PFAM: Glycosyl transferase family 2
YP_005202350.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_005202351.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_005202352.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_005202353.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_005202354.1	PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc
YP_005202355.1	PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_005202356.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_005202357.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005202359.1	PFAM: Predicted membrane protein (DUF2157)
YP_005202360.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase
YP_005202361.1	PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
YP_005202362.1	PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein
YP_005202363.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_005202364.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005202365.1	PFAM: UPF0126 domain
YP_005202366.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain
YP_005202367.1	PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_005202368.1	PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_005202369.1	PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_005202370.1	PFAM: SpoU rRNA Methylase family; SpoU, rRNA methylase, C-terminal
YP_005202371.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG
YP_005202372.1	PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component
YP_005202373.1	PFAM: Sodium/glutamate symporter; TIGRFAM: sodium--glutamate symport carrier (gltS)
YP_005202374.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease
YP_005202375.1	PFAM: AsmA family
YP_005202376.1	PFAM: Putative thioesterase (yiiD_Cterm); Acetyltransferase (GNAT) family; TIGRFAM: thioesterase domain, putative
YP_005202377.1	PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_005202378.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_005202379.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; Epoxide hydrolase N-terminal domain-like phosphatase
YP_005202380.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_005202381.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_005202382.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold
YP_005202383.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I)
YP_005202384.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase
YP_005202385.1	PFAM: Protein of unknown function, DUF414
YP_005202386.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB
YP_005202387.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I
YP_005202388.1	PFAM: DSBA-like thioredoxin domain
YP_005202389.1	PFAM: Phosphotransferase enzyme family
YP_005202390.1	PFAM: Protein of unknown function (DUF1040)
YP_005202391.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial
YP_005202392.1	PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB
YP_005202393.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005202394.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005202395.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase
YP_005202396.1	PFAM: family
YP_005202397.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005202398.1	PFAM: ABC transporter
YP_005202399.1	PFAM: RbsD / FucU transport protein family
YP_005202400.1	PFAM: K+ potassium transporter; TIGRFAM: potassium uptake protein
YP_005202401.1	PFAM: Protein of unknown function (DUF3763); AAA domain (dynein-related subfamily)
YP_005202402.1	PFAM: VWA domain containing CoxE-like protein
YP_005202403.1	PFAM: AsnC family
YP_005202404.1	PFAM: Flavodoxin
YP_005202405.1	PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A
YP_005202406.1	PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
YP_005202407.1	PFAM: ATP synthase I chain
YP_005202408.1	PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_005202409.1	PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_005202410.1	PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_005202411.1	PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_005202412.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_005202413.1	PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_005202414.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_005202415.1	PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_005202417.1	PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_005202418.1	PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_005202419.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_005202420.1	TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_005202421.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_005202422.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_005202423.1	PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_005202424.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_005202425.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005202426.1	PFAM: Xylose isomerase-like TIM barrel
YP_005202428.1	PFAM: Permease family
YP_005202429.1	PFAM: NADPH-dependent FMN reductase
YP_005202431.1	PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005202432.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005202433.1	PFAM: short chain dehydrogenase
YP_005202434.1	PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE
YP_005202435.1	PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain
YP_005202436.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD
YP_005202437.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_005202438.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; IMG reference gene:2506707033_SP
YP_005202439.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2186)
YP_005202442.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005202444.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202445.1	PFAM: Initiator Replication protein
YP_005202448.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005202449.1	PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter
YP_005202450.1	PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain; TIGRFAM: sucrose-6-phosphate hydrolase
YP_005202452.1	PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats)
YP_005202455.1	PFAM: MltA-interacting protein MipA
YP_005202456.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005202457.1	PFAM: AcrB/AcrD/AcrF family
YP_005202458.1	PFAM: Stress-induced bacterial acidophilic repeat motif
YP_005202459.1	PFAM: Domain of unknown function (DUF892)
YP_005202460.1	PFAM: Domain of unknown function (DUF892)
YP_005202461.1	PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_005202462.1	PFAM: Sodium/hydrogen exchanger family
YP_005202463.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase
YP_005202464.1	PFAM: short chain dehydrogenase; manually curated
YP_005202465.1	PFAM: Manganese containing catalase
YP_005202466.1	PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein
YP_005202467.1	PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_005202469.1	PFAM: Amino acid permease
YP_005202471.1	PFAM: Ornithine cyclodeaminase/mu-crystallin family
YP_005202472.1	PFAM: Endoribonuclease L-PSP
YP_005202473.1	PFAM: FAD dependent oxidoreductase
YP_005202474.1	PFAM: Levansucrase/Invertase
YP_005202475.1	PFAM: Ogr/Delta-like zinc finger
YP_005202476.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202477.1	PFAM: short chain dehydrogenase
YP_005202478.1	PFAM: Epoxide hydrolase N terminus
YP_005202479.1	PFAM: Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005202480.1	PFAM: Acetyltransferase (GNAT) family
YP_005202481.1	PFAM: Protein of unknown function (DUF1778)
YP_005202482.1	PFAM: Transposase
YP_005202485.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein
YP_005202486.1	PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A)
YP_005202487.1	PFAM: MarR family
YP_005202488.1	PFAM: Phage integrase family
YP_005202490.1	PFAM: Protein of unknown function (DUF1778)
YP_005202491.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005202492.1	PFAM: alpha/beta hydrolase fold
YP_005202494.1	PFAM: DJ-1/PfpI family
YP_005202495.1	PFAM: Aldehyde dehydrogenase family
YP_005202496.1	PFAM: Helix-turn-helix
YP_005202497.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202498.1	PFAM: Glutathione S-transferase, C-terminal domain
YP_005202499.1	PFAM: Transposase
YP_005202500.1	PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase
YP_005202501.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005202502.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005202505.1	PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_005202506.1	PFAM: Protein of unknown function (DUF1641)
YP_005202507.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_005202508.1	PFAM: Cytochrome oxidase subunit II
YP_005202510.1	PFAM: Stress-induced bacterial acidophilic repeat motif
YP_005202512.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005202513.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005202514.1	PFAM: HxlR-like helix-turn-helix
YP_005202515.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005202517.1	PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II
YP_005202518.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_005202519.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005202520.1	PFAM: Metallo-beta-lactamase superfamily
YP_005202521.1	PFAM: Amidase
YP_005202522.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable FMN-dependent enzyme, DR_2398 family
YP_005202524.1	PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
YP_005202525.1	PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain
YP_005202526.1	PFAM: NifQ
YP_005202527.1	PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB
YP_005202528.1	PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein
YP_005202529.1	PFAM: PAS fold; TIGRFAM: PAS domain S-box; nitrogen fixation negative regulator NifL
YP_005202530.1	PFAM: PPIC-type PPIASE domain; TIGRFAM: nitrogen fixation protein NifM
YP_005202531.1	PFAM: NifZ domain
YP_005202532.1	PFAM: Nitrogen fixation protein NifW
YP_005202533.1	PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV
YP_005202534.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS
YP_005202535.1	PFAM: NifU-like N terminal domain; BFD-like [2Fe-2S] binding domain; NifU-like domain; TIGRFAM: Fe-S cluster assembly protein NifU
YP_005202537.1	PFAM: Dinitrogenase iron-molybdenum cofactor
YP_005202538.1	PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN
YP_005202539.1	PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE
YP_005202540.1	PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX
YP_005202541.1	PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT
YP_005202542.1	PFAM: Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain
YP_005202543.1	PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain
YP_005202544.1	PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein
YP_005220307.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family; manually curated
YP_005220308.1	PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein
YP_005220309.1	PFAM: Chitinase class I
YP_005220315.1	PFAM: Chitinase class I
YP_005220318.1	PFAM: Protein of unknown function (DUF1311)
YP_005220320.1	PFAM: PAAR motif
YP_005220322.1	PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing
YP_005220323.1	PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family
YP_005220324.1	PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family
YP_005220325.1	TIGRFAM: type VI secretion lipoprotein, VC_A0113 family
YP_005220326.1	PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; manually curated
YP_005220327.1	manually curated
YP_005220331.1	PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, VC_A0119 family
YP_005220332.1	PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein
YP_005220333.1	PFAM: Protein of unknown function (DUF1311)
YP_005220334.1	PFAM: ImpA-related N-terminal; ImpA domain protein
YP_005220336.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_005220337.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_005220338.1	PFAM: Protein of unknown function (DUF2474)
YP_005220339.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005220340.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005220341.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005220342.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220343.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220344.1	PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain
YP_005220345.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: proline-specific peptidases, Bacillus coagulans-type subfamily
YP_005220346.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005220347.1	PFAM: Major Facilitator Superfamily
YP_005220348.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_005220349.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_005220350.1	PFAM: Protein of unknown function (DUF2474)
YP_005220351.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005220352.1	PFAM: short chain dehydrogenase
YP_005220353.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_005220354.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_005220355.1	PFAM: Amidohydrolase; COG3618
YP_005220356.1	PFAM: short chain dehydrogenase
YP_005220357.1	PFAM: Domain of unknown function (DUF718)
YP_005220358.1	PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease
YP_005220359.1	PFAM: Domain of unknown function (DUF1852)
YP_005220360.1	PFAM: Cobalamin-independent synthase, Catalytic domain
YP_005220361.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_005220362.1	PFAM: SelR domain; TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: methionine-R-sulfoxide reductase
YP_005220363.1	PFAM: Glycosyl hydrolases family 31
YP_005220364.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter
YP_005220365.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005220366.1	PFAM: Protein of unknown function (DUF2778); manually curated
YP_005220368.1	PFAM: Protein of unknown function (DUF1493)
YP_005220369.1	PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1
YP_005220370.1	PFAM: Shikimate kinase
YP_005220371.1	PFAM: Biofilm development protein YmgB/AriR
YP_005220372.1	PFAM: NmrA-like family
YP_005220373.1	PFAM: HxlR-like helix-turn-helix
YP_005220374.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_005220375.1	PFAM: Amidohydrolase family
YP_005220376.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005220377.1	PFAM: EamA-like transporter family
YP_005220378.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_005220379.1	PFAM: YdjC-like protein
YP_005220380.1	PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain
YP_005220381.1	PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005220382.1	PFAM: PTS system, Lactose/Cellobiose specific IIA subunit; TIGRFAM: phosphotransferase system enzyme II, lactose-specific, factor III
YP_005220383.1	PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component
YP_005220384.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component
YP_005220385.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005220387.1	PFAM: GMC oxidoreductase
YP_005220388.1	PFAM: Cytochrome c
YP_005220390.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005220391.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005220392.1	PFAM: Acetyltransferase (GNAT) family
YP_005220395.1	PFAM: Biofilm development protein YmgB/AriR
YP_005220396.1	PFAM: Biofilm development protein YmgB/AriR
YP_005220397.1	PFAM: EAL domain; Sensors of blue-light using FAD
YP_005220398.1	PFAM: Tellurite resistance protein TehB; TIGRFAM: tellurite resistance protein TehB
YP_005220399.1	PFAM: Bacterial protein of unknown function (DUF883)
YP_005220401.1	PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain
YP_005220402.1	PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily
YP_005220405.1	PFAM: Transposase IS200 like
YP_005220406.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_005220407.1	PFAM: Major Facilitator Superfamily
YP_005220408.1	PFAM: Small Multidrug Resistance protein
YP_005220409.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005220410.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220411.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220412.1	PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_005220413.1	PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_005220414.1	PFAM: Dihydrodipicolinate synthetase family
YP_005220415.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005220416.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005220417.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
YP_005220418.1	PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain
YP_005220419.1	PFAM: Helix-turn-helix
YP_005220420.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005220421.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_005220422.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; manually curated
YP_005220423.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_005220424.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005220425.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005220426.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005220427.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220428.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220429.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005220430.1	PFAM: Ogr/Delta-like zinc finger; manually curated
YP_005220431.1	PFAM: SEFIR domain
YP_005220434.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005220435.1	manually curated
YP_005220437.1	PFAM: Initiator Replication protein
YP_005220438.1	PFAM: ParG
YP_005220439.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005220440.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit
YP_005220441.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_005220442.1	PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type
YP_005220443.1	PFAM: Bacterial extracellular solute-binding protein
YP_005220444.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220445.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220446.1	PFAM: short chain dehydrogenase
YP_005220447.1	PFAM: Phosphotransferase enzyme family
YP_005220448.1	PFAM: Aminotransferase class-III
YP_005220449.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005220450.1	PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family
YP_005220451.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases
YP_005220452.1	PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit
YP_005220453.1	PFAM: DMSO reductase anchor subunit (DmsC)
YP_005220455.1	PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain
YP_005220456.1	PFAM: TM2 domain
YP_005220458.1	PFAM: Protein of unknown function (DUF1471)
YP_005220459.1	PFAM: PTS system sugar-specific permease component
YP_005220460.1	PFAM: Aldehyde dehydrogenase family
YP_005220461.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005220462.1	PFAM: H-NS histone family
YP_005220463.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_005220465.1	PFAM: Protein of unknown function (DUF1493)
YP_005220466.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005220467.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_005220468.1	PFAM: Fic/DOC family
YP_005220469.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005220470.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005220471.1	PFAM: ABC transporter
YP_005220472.1	PFAM: family; TIGRFAM: rhamnose ABC transporter, rhamnose-binding protein
YP_005220473.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005220474.1	PFAM: Aldehyde dehydrogenase family
YP_005220475.1	PFAM: Uncharacterised ACR, YkgG family COG1556
YP_005220478.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain
YP_005220479.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
YP_005220480.1	PFAM: Variant SH3 domain
YP_005220482.1	PFAM: Protein of unknown function, DUF596
YP_005220485.1	PFAM: Protein of unknown function (DUF1272)
YP_005220486.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005220487.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005220488.1	PFAM: Exonuclease
YP_005220489.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_005220490.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005220491.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220492.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220493.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005220494.1	PFAM: ABC transporter
YP_005220497.1	PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family
YP_005220498.1	PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family
YP_005220499.1	TIGRFAM: type VI secretion lipoprotein, VC_A0113 family
YP_005220500.1	PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing
YP_005220505.1	PFAM: Protein of unknown function (DUF3274)
YP_005220506.1	PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein
YP_005220507.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220508.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005220509.1	PFAM: Major Facilitator Superfamily
YP_005220510.1	PFAM: ABC transporter
YP_005220511.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005220512.1	PFAM: Bacterial regulatory proteins, lacI family; TIGRFAM: D-fructose-responsive transcription factor
YP_005220513.1	PFAM: Glycosyl hydrolases family 32 N-terminal domain; TIGRFAM: sucrose-6-phosphate hydrolase
YP_005220514.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, sucrose-specific IIBC component; PTS system, glucose-like IIB component; PTS system, maltose and glucose-specific subfamily, IIC component
YP_005220515.1	PFAM: LamB porin
YP_005220516.1	PFAM: pfkB family carbohydrate kinase
YP_005220517.1	PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_005220518.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_005220519.1	PFAM: Bacterial extracellular solute-binding protein, family 7
YP_005220520.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein
YP_005220521.1	PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_005220522.1	PFAM: Transcriptional regulator PadR-like family; manually curated
YP_005220523.1	TIGRFAM: RHS repeat-associated core domain
YP_005220524.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005220525.1	PFAM: Protein of unknown function (DUF3423)
YP_005220527.1	TIGRFAM: pentapeptide MXKDX repeat protein
YP_005220528.1	PFAM: Oxidoreductase molybdopterin binding domain
YP_005220529.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_005220530.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005220531.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005220532.1	PFAM: Small Multidrug Resistance protein
YP_005220533.1	PFAM: Helix-turn-helix
YP_005220534.1	PFAM: Bacterial protein of unknown function (DUF903)
YP_005220535.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005220536.1	PFAM: FecR protein
YP_005220537.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor
YP_005220538.1	PFAM: Periplasmic binding protein
YP_005220539.1	PFAM: FecCD transport family
YP_005220540.1	PFAM: FecCD transport family
YP_005220541.1	PFAM: ABC transporter
YP_005220542.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005220543.1	PFAM: Protein of unknown function (DUF2778)
YP_005220545.1	PFAM: FMN-dependent dehydrogenase
YP_005220546.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005220547.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); TIGRFAM: coenzyme PQQ biosynthesis probable peptidase PqqF
YP_005220548.1	PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein E; radical SAM additional 4Fe4S-binding domain
YP_005220549.1	PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD
YP_005220550.1	PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C
YP_005220551.1	TIGRFAM: coenzyme PQQ biosynthesis protein B
YP_005220552.1	PFAM: PqqA family; TIGRFAM: coenzyme PQQ biosynthesis protein A; manually curated
YP_005220553.1	PFAM: Membrane dipeptidase (Peptidase family M19)
YP_005220554.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_005220555.1	PFAM: Homocysteine S-methyltransferase
YP_005220556.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005220557.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220558.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005220559.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005220560.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005220561.1	PFAM: Beta-lactamase
YP_005220563.1	PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases
YP_005220564.1	PFAM: Pyridoxal-dependent decarboxylase conserved domain
YP_005220565.1	PFAM: Mechanosensitive ion channel
YP_005220566.1	PFAM: Protein of unknown function (DUF421)
YP_005220568.1	PFAM: Alcohol dehydrogenase GroES-like domain
YP_005220569.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase
YP_005220570.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase
YP_005220572.1	PFAM: Periplasmic binding protein
YP_005220573.1	PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005220574.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005220575.1	PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain
YP_005220576.1	PFAM: Protein of unknown function (DUF466)
YP_005220577.1	PFAM: Carbon starvation protein CstA
YP_005220578.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005220580.1	PFAM: Peptidase S24-like
YP_005220581.1	PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif
YP_005220582.1	PFAM: Mechanosensitive ion channel
YP_005220583.1	PFAM: SnoaL-like polyketide cyclase
YP_005220584.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005220585.1	PFAM: Aldo/keto reductase family
YP_005220586.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005220587.1	PFAM: Domain of unknown function DUF
YP_005220588.1	PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family; manually curated
YP_005220589.1	PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family
YP_005220590.1	PFAM: Protein of unknown function (DUF796)
YP_005220591.1	PFAM: Gene 25-like lysozyme
YP_005220592.1	PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family
YP_005220593.1	PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family
YP_005220594.1	PFAM: Phage-related baseplate assembly protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein
YP_005220596.1	PFAM: PAAR motif
YP_005220597.1	PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, ImpA family
YP_005220599.1	PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family
YP_005220600.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family
YP_005220602.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family
YP_005220603.1	PFAM: ImpA-related N-terminal; ImpA domain protein
YP_005220605.1	PFAM: K+ potassium transporter; TIGRFAM: potassium uptake protein
YP_005220608.1	PFAM: Beta-lactamase
YP_005220609.1	PFAM: ROK family
YP_005220610.1	PFAM: Major Facilitator Superfamily
YP_005220611.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005220614.1	PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_005220615.1	PFAM: Periplasmic solute binding protein family
YP_005220616.1	PFAM: ABC transporter
YP_005220617.1	PFAM: ABC 3 transport family
YP_005220618.1	PFAM: ABC 3 transport family
YP_005220620.1	PFAM: Tryptophan/tyrosine permease family; TIGRFAM: aromatic amino acid transport protein
YP_005220622.1	PFAM: Pirin
YP_005220623.1	PFAM: ABC transporter
YP_005220624.1	PFAM: Bacterial protein of unknown function (DUF894)
YP_005220625.1	PFAM: alpha/beta hydrolase fold
YP_005220626.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005220627.1	PFAM: short chain dehydrogenase
YP_005220628.1	PFAM: Protein of unknown function (DUF3750)
YP_005220629.1	PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
YP_005220630.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_005220631.1	PFAM: FAD binding domain; NADH:flavin oxidoreductase / NADH oxidase family; FMN-binding domain; TIGRFAM: flavocytochrome c
YP_005220632.1	PFAM: ApbE family
YP_005220633.1	PFAM: Response regulator receiver domain
YP_005220634.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold
YP_005220635.1	PFAM: Domain of unknown function (DUF3315)
YP_005220636.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
YP_005220637.1	PFAM: short chain dehydrogenase
YP_005220638.1	PFAM: Predicted membrane protein (DUF2231)
YP_005220639.1	PFAM: Glucose / Sorbosone dehydrogenase; Membrane bound L-sorbosone dehydrogenase
YP_005220641.1	PFAM: Helix-turn-helix domain, rpiR family; SIS domain
YP_005220642.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_005220643.1	PFAM: Periplasmic binding protein
YP_005220644.1	PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial
YP_005220645.1	PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin)
YP_005220646.1	PFAM: Arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein
YP_005220647.1	PFAM: Bacterial regulatory protein, arsR family
YP_005220649.1	PFAM: Uncharacterised BCR, COG1649
YP_005220653.1	PFAM: YebG protein
YP_005220654.1	PFAM: B3/4 domain
YP_005220655.1	TIGRFAM: conserved hypothetical protein
YP_005220656.1	PFAM: Sulfite exporter TauE/SafE
YP_005220657.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005220658.1	PFAM: Trehalase
YP_005220659.1	PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]
YP_005220660.1	PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB
YP_005220661.1	PFAM: Oligogalacturonate-specific porin protein (KdgM)
YP_005220663.1	PFAM: Major Facilitator Superfamily
YP_005220664.1	PFAM: Protein of unknown function (DUF535)
YP_005220665.1	PFAM: PAP2 superfamily
YP_005220666.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_005220667.1	PFAM: Protein of unknown function (DUF2778)
YP_005220669.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005220670.1	PFAM: family
YP_005220671.1	PFAM: LVIVD repeat
YP_005220672.1	PFAM: EamA-like transporter family
YP_005220673.1	PFAM: 2-phosphosulpholactate phosphatase
YP_005220674.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005220675.1	PFAM: Dihydrodipicolinate synthetase family
YP_005220677.1	PFAM: CblD like pilus biogenesis initiator
YP_005220679.1	PFAM: CS1 type fimbrial major subunit
YP_005220680.1	PFAM: Gram-negative pili assembly chaperone, N-terminal domain
YP_005220682.1	PFAM: Virulence factor SrfB
YP_005220683.1	PFAM: Putative bacterial virulence factor
YP_005220684.1	PFAM: DeoC/LacD family aldolase
YP_005220685.1	PFAM: Hsp70 protein
YP_005220688.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939)
YP_005220689.1	PFAM: Sugar (and other) transporter; Osmosensory transporter coiled coil; TIGRFAM: metabolite-proton symporter
YP_005220691.1	PFAM: Cupin domain
YP_005220692.1	PFAM: Ribose-5-phosphate isomerase; Ribose/Galactose Isomerase
YP_005220693.1	PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase
YP_005220694.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005220695.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005220696.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005220697.1	PFAM: Transcriptional regulator
YP_005220698.1	PFAM: Gram-negative porin
YP_005220700.1	PFAM: short chain dehydrogenase; TIGRFAM: acetoin reductases
YP_005220701.1	PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005220702.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005220703.1	PFAM: Tannase and feruloyl esterase
YP_005220706.1	PFAM: Methyltransferase domain; Formylglycine-generating sulfatase enzyme
YP_005220708.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue
YP_005220709.1	PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family
YP_005220710.1	PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family
YP_005220711.1	PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family
YP_005220712.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family
YP_005220713.1	PFAM: OmpA family
YP_005220714.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; IMG reference gene:2506711594_SP
YP_005459729.1	PFAM: Domain of unknown function DUF29; manually curated
YP_005459732.1	PFAM: Domain of unknown function (DUF1814)
YP_005459733.1	manually curated
YP_005459735.1	PFAM: Protein of unknown function (DUF1471); manually curated
YP_005459736.1	IMG reference gene:2506712142_SP