-- dump date 20140620_022718 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 745277000001 SEQ_END SEQ_END NC_016818.1 4861101 4861101 DR NC_016818.1; contig end 4861101..4861101 Rahnella aquatilis CIP 78.65 = ATCC 33071 745277000002 SEQ_END SEQ_END NC_016819.1 115487 115487 DR NC_016819.1; contig end 115487..115487 Rahnella aquatilis CIP 78.65 = ATCC 33071 745277000003 SEQ_END SEQ_END NC_016835.1 463906 463906 DR NC_016835.1; contig end 463906..463906 Rahnella aquatilis CIP 78.65 = ATCC 33071 745277000004 SEQ_END SEQ_END NC_017092.1 8406 8406 DR NC_017092.1; contig end 8406..8406 Rahnella aquatilis CIP 78.65 = ATCC 33071 YP_005198095.1 CDS Rahaq2_0001 NC_016818.1 185 430 R hypothetical protein complement(185..430) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793600 YP_005198096.1 CDS Rahaq2_0002 NC_016818.1 489 1880 D PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein DnaA 489..1880 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793602 YP_005198097.1 CDS Rahaq2_0003 NC_016818.1 1885 2985 D PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 1885..2985 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793604 YP_005198098.1 CDS Rahaq2_0004 NC_016818.1 2995 4083 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; recF protein 2995..4083 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793605 YP_005198099.1 CDS Rahaq2_0005 NC_016818.1 4103 6517 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B 4103..6517 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794296 YP_005198100.1 CDS Rahaq2_0006 NC_016818.1 6674 7489 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 6674..7489 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793700 YP_005198101.1 CDS Rahaq2_0007 NC_016818.1 7515 8777 D PFAM: Protein of unknown function (DUF3748); WD40-like Beta Propeller Repeat; periplasmic component of the Tol biopolymer transport system 7515..8777 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793707 YP_005198102.1 CDS Rahaq2_0008 NC_016818.1 8819 9196 R PFAM: Protein of unknown function (DUF1375); putative periplasmic lipoprotein complement(8819..9196) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794310 YP_005198103.1 CDS Rahaq2_0009 NC_016818.1 9577 9987 D PFAM: Hsp20/alpha crystallin family; molecular chaperone 9577..9987 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793710 YP_005198104.1 CDS Rahaq2_0010 NC_016818.1 10016 10111 R hypothetical protein complement(10016..10111) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793598 YP_005198105.1 CDS Rahaq2_0011 NC_016818.1 10144 10578 D PFAM: Hsp20/alpha crystallin family; molecular chaperone 10144..10578 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789764 YP_005198106.1 CDS Rahaq2_0012 NC_016818.1 10656 11909 R PFAM: Aminotransferase class I and II; alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase complement(10656..11909) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789765 YP_005198107.1 CDS Rahaq2_0013 NC_016818.1 12168 13376 D hypothetical protein 12168..13376 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789766 YP_005198108.1 CDS Rahaq2_0014 NC_016818.1 13439 14416 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; lactate dehydrogenase-like oxidoreductase complement(13439..14416) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789767 YP_005198109.1 CDS Rahaq2_0015 NC_016818.1 14413 15705 R PFAM: Major Facilitator Superfamily; sugar phosphate permease complement(14413..15705) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789768 YP_005198110.1 CDS Rahaq2_0016 NC_016818.1 15749 16498 R hypothetical protein complement(15749..16498) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793739 YP_005198111.1 CDS Rahaq2_0017 NC_016818.1 16712 17746 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(16712..17746) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789769 YP_005198112.1 CDS Rahaq2_0018 NC_016818.1 17814 19100 R PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter; oligosaccharide:H+ symporter complement(17814..19100) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789770 YP_005198113.1 CDS Rahaq2_0019 NC_016818.1 19160 21286 R PFAM: Melibiase; alpha-galactosidase complement(19160..21286) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789771 YP_005198114.1 CDS Rahaq2_0020 NC_016818.1 21428 22435 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(21428..22435) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789772 YP_005198115.1 CDS Rahaq2_0021 NC_016818.1 22540 23202 R PFAM: OmpA family; outer membrane protein/peptidoglycan-associated (lipo)protein complement(22540..23202) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789773 YP_005198116.1 CDS Rahaq2_0022 NC_016818.1 23423 23866 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(23423..23866) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789774 YP_005198117.1 CDS Rahaq2_0023 NC_016818.1 23863 24435 R PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I complement(23863..24435) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789775 YP_005198118.1 CDS Rahaq2_0024 NC_016818.1 24627 26633 D PFAM: Autotransporter beta-domain; GDSL-like Lipase/Acylhydrolase; phospholipase/lecithinase/hemolysin 24627..26633 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789776 YP_005198119.1 CDS Rahaq2_0025 NC_016818.1 26800 27714 D PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; glycyl-tRNA synthetase subunit alpha 26800..27714 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789777 YP_005198120.1 CDS Rahaq2_0026 NC_016818.1 27724 29793 D PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; glycyl-tRNA synthetase subunit beta 27724..29793 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789778 YP_005198121.1 CDS Rahaq2_0027 NC_016818.1 30253 30975 D PFAM: Protein of unknown function (DUF3053); hypothetical protein 30253..30975 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789779 YP_005198122.1 CDS Rahaq2_0028 NC_016818.1 31391 31750 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) 31391..31750 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789780 YP_005198123.1 CDS Rahaq2_0029 NC_016818.1 31781 33184 D PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, mannitol-specific IIC component; PTS system mannitol-specific transporter subunit IIC 31781..33184 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789781 YP_005198124.1 CDS Rahaq2_0030 NC_016818.1 33181 34449 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; theronine dehydrogenase-like Zn-dependent dehydrogenase 33181..34449 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789782 YP_005198125.1 CDS Rahaq2_0031 NC_016818.1 34492 35019 D PFAM: Mannitol repressor; transcriptional regulator 34492..35019 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789783 YP_005198126.1 CDS Rahaq2_0032 NC_016818.1 34997 35704 D panthothenate kinase 34997..35704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789784 YP_005198127.1 CDS Rahaq2_0033 NC_016818.1 35819 36613 D PFAM: DSBA-like thioredoxin domain; protein-disulfide isomerase 35819..36613 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789785 YP_005198128.1 CDS Rahaq2_0034 NC_016818.1 36847 37026 D hypothetical protein 36847..37026 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789786 YP_005198129.1 CDS Rahaq2_0035 NC_016818.1 37060 38619 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; deoxycytidylate deaminase 37060..38619 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789787 YP_005198130.1 CDS Rahaq2_0036 NC_016818.1 39121 41034 D PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, mannitol-specific IIC component; PTS system mannitol-specific transporter subunit IIC 39121..41034 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789788 YP_005198131.1 CDS Rahaq2_0037 NC_016818.1 41177 42325 D PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; mannitol-1-phosphate/altronate dehydrogenase 41177..42325 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789789 YP_005198132.1 CDS Rahaq2_0038 NC_016818.1 42276 43010 D PFAM: Mannitol repressor; transcriptional regulator 42276..43010 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793740 YP_005198133.1 CDS Rahaq2_0039 NC_016818.1 43037 43150 D hypothetical protein 43037..43150 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789790 YP_005198134.1 CDS Rahaq2_0040 NC_016818.1 43143 43751 R PFAM: LysE type translocator; putative threonine efflux protein complement(43143..43751) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789791 YP_005198135.1 CDS Rahaq2_0041 NC_016818.1 43896 45389 D PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; transcriptional regulator with HTH domain and aminotransferase domain 43896..45389 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793741 YP_005198136.1 CDS Rahaq2_0042 NC_016818.1 45358 45780 R hypothetical protein complement(45358..45780) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789792 YP_005198137.1 CDS Rahaq2_0043 NC_016818.1 45947 46306 D PFAM: Protein of unknown function (DUF2810); hypothetical protein 45947..46306 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789793 YP_005198138.1 CDS Rahaq2_0044 NC_016818.1 46390 47328 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(46390..47328) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789794 YP_005198139.1 CDS Rahaq2_0045 NC_016818.1 47659 48339 R PFAM: MOSC domain; 3-alpha domain; hypothetical protein complement(47659..48339) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789795 YP_005198140.1 CDS Rahaq2_0046 NC_016818.1 48446 50392 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(48446..50392) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789796 YP_005198141.1 CDS Rahaq2_0047 NC_016818.1 50664 51284 R PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutase complement(50664..51284) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789797 YP_005198142.1 CDS Rahaq2_0048 NC_016818.1 51525 53066 R PFAM: Fibronectin type III domain; chitin-binding domain-containing protein complement(51525..53066) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789798 YP_005198143.1 CDS Rahaq2_0049 NC_016818.1 53269 54111 R PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD complement(53269..54111) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789799 YP_005198144.1 CDS Rahaq2_0050 NC_016818.1 54257 57304 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; formate dehydrogenase subunit alpha 54257..57304 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789800 YP_005198145.1 CDS Rahaq2_0051 NC_016818.1 57317 58228 D PFAM: Formate dehydrogenase N, transmembrane; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing; formate dehydrogenase, beta subunit, Fe-S containing 57317..58228 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789801 YP_005198146.1 CDS Rahaq2_0052 NC_016818.1 58225 58878 D PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 58225..58878 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789802 YP_005198147.1 CDS Rahaq2_0053 NC_016818.1 58875 59789 D PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE; formate dehydrogenase accessory protein FdhE 58875..59789 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789803 YP_005198148.1 CDS Rahaq2_0054 NC_016818.1 59875 60516 D PFAM: Glutathione S-transferase, C-terminal domain; glutathione S-transferase 59875..60516 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793742 YP_005198149.1 CDS Rahaq2_0055 NC_016818.1 60618 62156 D PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase 60618..62156 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793743 YP_005198150.1 CDS Rahaq2_0056 NC_016818.1 62433 63095 D PFAM: DSBA-like thioredoxin domain; putative dithiol-disulfide isomerase involved in polyketide biosynthesis 62433..63095 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789804 YP_005198151.1 CDS Rahaq2_0057 NC_016818.1 63095 64042 D hypothetical protein 63095..64042 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793744 YP_005198152.1 CDS Rahaq2_0058 NC_016818.1 64061 66199 D PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; bacteriocin/lantibiotic ABC transporter 64061..66199 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789805 YP_005198153.1 CDS Rahaq2_0059 NC_016818.1 66196 67368 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 66196..67368 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789806 YP_005198154.1 CDS Rahaq2_0060 NC_016818.1 67355 69307 D PFAM: ABC transporter; Predicted permease; antimicrobial peptide ABC transporter ATPase 67355..69307 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789807 YP_005198155.1 CDS Rahaq2_0061 NC_016818.1 69304 70734 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family efflux transporter outer membrane lipoprotein 69304..70734 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789808 YP_005198156.1 CDS Rahaq2_0062 NC_016818.1 70727 71980 D PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase 70727..71980 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789809 YP_005198157.1 CDS Rahaq2_0063 NC_016818.1 71980 72780 D PFAM: MaoC like domain; MaoC-like protein 71980..72780 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789810 YP_005198158.1 CDS Rahaq2_0064 NC_016818.1 72798 73049 D PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; phosphopantetheine-containing protein 72798..73049 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789811 YP_005198159.1 CDS Rahaq2_0065 NC_016818.1 73049 73786 D PFAM: short chain dehydrogenase; manually curated; dehydrogenase 73049..73786 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789812 YP_005198160.1 CDS Rahaq2_0066 NC_016818.1 74142 74324 D hypothetical protein 74142..74324 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793745 YP_005198161.1 CDS Rahaq2_0067 NC_016818.1 74394 75599 R PFAM: Major Facilitator Superfamily; manually curated; non-canonical start codon; arabinose efflux permease family protein complement(74394..75599) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793746 YP_005198162.1 CDS Rahaq2_0068 NC_016818.1 75868 76863 D PFAM: Acyltransferase family; hypothetical protein 75868..76863 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789813 YP_005198163.1 CDS Rahaq2_0069 NC_016818.1 76883 78874 R PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain complement(76883..78874) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793747 YP_005198164.1 CDS Rahaq2_0070 NC_016818.1 78975 79889 R PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family; transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain complement(78975..79889) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789814 YP_005198165.1 CDS Rahaq2_0071 NC_016818.1 79925 80479 R PFAM: Isochorismatase family; nicotinamidase-like amidase complement(79925..80479) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789815 YP_005198166.1 CDS Rahaq2_0072 NC_016818.1 80611 81207 R PFAM: DJ-1/PfpI family; putative intracellular protease/amidase complement(80611..81207) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789816 YP_005198167.1 CDS Rahaq2_0073 NC_016818.1 81295 82326 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; theronine dehydrogenase-like Zn-dependent dehydrogenase complement(81295..82326) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793748 YP_005198168.1 CDS Rahaq2_0074 NC_016818.1 82449 83651 R PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter; benzoate transporter complement(82449..83651) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789817 YP_005198169.1 CDS Rahaq2_0075 NC_016818.1 83790 84356 D PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator 83790..84356 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789818 YP_005198170.1 CDS Rahaq2_0076 NC_016818.1 84385 84837 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase 84385..84837 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793749 YP_005198171.1 CDS Rahaq2_0077 NC_016818.1 84834 85304 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(84834..85304) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789819 YP_005198172.1 CDS Rahaq2_0078 NC_016818.1 85319 85858 R hypothetical protein complement(85319..85858) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789820 YP_005198173.1 CDS Rahaq2_0079 NC_016818.1 86074 86553 R PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(86074..86553) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789821 YP_005198174.1 CDS Rahaq2_0080 NC_016818.1 86576 86788 R hypothetical protein complement(86576..86788) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789822 YP_005198175.1 CDS Rahaq2_0081 NC_016818.1 86789 87439 R hypothetical protein complement(86789..87439) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789823 YP_005198176.1 CDS Rahaq2_0082 NC_016818.1 87735 88364 D PFAM: Glutathione S-transferase, N-terminal domain; glutathione S-transferase 87735..88364 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789824 YP_005198177.1 CDS Rahaq2_0083 NC_016818.1 88356 88802 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(88356..88802) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789825 YP_005198178.1 CDS Rahaq2_0084 NC_016818.1 88822 89457 R PFAM: LysE type translocator; putative threonine efflux protein complement(88822..89457) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789826 YP_005198179.1 CDS Rahaq2_0085 NC_016818.1 89614 89871 R PFAM: Protein of unknown function (DUF1471); hypothetical protein complement(89614..89871) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789827 YP_005198180.1 CDS Rahaq2_0086 NC_016818.1 90276 90524 D PFAM: Transglycosylase associated protein; hypothetical protein 90276..90524 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789828 YP_005198181.1 CDS Rahaq2_0087 NC_016818.1 90585 90923 R PFAM: Plasmid stabilisation system protein; plasmid stabilization system protein complement(90585..90923) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789829 YP_005198182.1 CDS Rahaq2_0088 NC_016818.1 90925 91185 R PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(90925..91185) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789830 YP_005198183.1 CDS Rahaq2_0089 NC_016818.1 91275 91628 R hypothetical protein complement(91275..91628) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789831 YP_005198184.1 CDS Rahaq2_0090 NC_016818.1 91744 92442 R PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; urea ABC transporter ATP-binding protein UrtE complement(91744..92442) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789832 YP_005198185.1 CDS Rahaq2_0091 NC_016818.1 92454 93260 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; urea ABC transporter ATP-binding protein UrtD complement(92454..93260) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789833 YP_005198186.1 CDS Rahaq2_0092 NC_016818.1 93260 94333 R PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; urea ABC transporter permease UrtC complement(93260..94333) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789834 YP_005198187.1 CDS Rahaq2_0093 NC_016818.1 94333 95901 R PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; urea ABC transporter permease UrtB complement(94333..95901) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793750 YP_005198188.1 CDS Rahaq2_0094 NC_016818.1 96092 97360 R TIGRFAM: urea ABC transporter, urea binding protein; urea ABC transporter, urea binding protein complement(96092..97360) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789835 YP_005198189.1 CDS Rahaq2_0095 NC_016818.1 97446 98168 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(97446..98168) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789836 YP_005198190.1 CDS Rahaq2_0096 NC_016818.1 98197 101829 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain, N-terminal domain; Allophanate hydrolase subunit 1; Biotin-requiring enzyme; TIGRFAM: urea carboxylase; biotin-dependent carboxylase uncharacterized domain; urea carboxylase complement(98197..101829) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789837 YP_005198191.1 CDS Rahaq2_0097 NC_016818.1 101840 103687 R PFAM: Amidase; TIGRFAM: allophanate hydrolase; allophanate hydrolase complement(101840..103687) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789838 YP_005198192.1 CDS Rahaq2_0098 NC_016818.1 103973 105418 D lysophospholipase 103973..105418 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789839 YP_005198193.1 CDS Rahaq2_0099 NC_016818.1 105485 105949 D PFAM: MarR family; manually curated; transcriptional regulator 105485..105949 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789840 YP_005198194.1 CDS Rahaq2_0100 NC_016818.1 106084 106506 D PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily; Ohr subfamily peroxiredoxin 106084..106506 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789841 YP_005198195.1 CDS Rahaq2_0101 NC_016818.1 106778 108457 D PFAM: Sulfatase; Domain of unknown function (DUF1705); putative membrane-associated, metal-dependent hydrolase 106778..108457 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789842 YP_005198196.1 CDS Rahaq2_0105 NC_016818.1 109029 109508 R PFAM: Toxin with endonuclease activity YhaV; Toxin with endonuclease activity YhaV complement(109029..109508) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789846 YP_005198197.1 CDS Rahaq2_0106 NC_016818.1 109515 109859 R PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; AbrB family DNA-binding protein complement(109515..109859) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789847 YP_005198198.1 CDS Rahaq2_0107 NC_016818.1 109941 110270 R hypothetical protein complement(109941..110270) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789848 YP_005198199.1 CDS Rahaq2_0108 NC_016818.1 110239 110475 R PFAM: Protein of unknown function (DUF3423); hypothetical protein complement(110239..110475) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789849 YP_005198200.1 CDS Rahaq2_0109 NC_016818.1 110687 112066 R PFAM: MmgE/PrpD family; propionate catabolism protein complement(110687..112066) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789850 YP_005198201.1 CDS Rahaq2_0110 NC_016818.1 112086 112868 R PFAM: ABC transporter; dipeptide/oligopeptide/nickel ABC transporter ATPase complement(112086..112868) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789851 YP_005198202.1 CDS Rahaq2_0111 NC_016818.1 112868 113734 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; dipeptide/oligopeptide/nickel ABC transporter ATPase complement(112868..113734) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793751 YP_005198203.1 CDS Rahaq2_0112 NC_016818.1 113727 114662 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(113727..114662) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793752 YP_005198204.1 CDS Rahaq2_0113 NC_016818.1 114659 115744 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(114659..115744) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789852 YP_005198205.1 CDS Rahaq2_0114 NC_016818.1 115773 117371 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(115773..117371) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789853 YP_005198206.1 CDS Rahaq2_0115 NC_016818.1 117585 119024 R PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase; amidohydrolase complement(117585..119024) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789854 YP_005198207.1 CDS Rahaq2_0116 NC_016818.1 119282 120208 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(119282..120208) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789855 YP_005198208.1 CDS Rahaq2_0117 NC_016818.1 120937 122544 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 120937..122544 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789856 YP_005198209.1 CDS Rahaq2_0118 NC_016818.1 122752 123771 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 122752..123771 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789857 YP_005198210.1 CDS Rahaq2_0119 NC_016818.1 123782 124696 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 123782..124696 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789858 YP_005198211.1 CDS Rahaq2_0120 NC_016818.1 124707 125732 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 124707..125732 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789859 YP_005198212.1 CDS Rahaq2_0121 NC_016818.1 125722 126744 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 125722..126744 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789860 YP_005198213.1 CDS Rahaq2_0122 NC_016818.1 126808 127416 R PFAM: Fic/DOC family; TIGRFAM: mobile mystery protein B; mobile mystery protein B complement(126808..127416) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789861 YP_005198214.1 CDS Rahaq2_0123 NC_016818.1 127413 127880 R PFAM: Helix-turn-helix; TIGRFAM: mobile mystery protein A; mobile mystery protein A complement(127413..127880) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789862 YP_005198215.1 CDS Rahaq2_0124 NC_016818.1 128074 129087 R PFAM: Glycosyl hydrolases family 8; endoglucanase Y complement(128074..129087) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789863 YP_005198216.1 CDS Rahaq2_0125 NC_016818.1 129097 129576 R PFAM: Cellulose synthase subunit D; Cellulose synthase subunit D complement(129097..129576) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789864 YP_005198217.1 CDS Rahaq2_0126 NC_016818.1 129595 133644 R PFAM: Cellulose synthase operon protein C C-terminus (BCSC_C); cytochrome c biogenesis factor complement(129595..133644) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789865 YP_005198218.1 CDS Rahaq2_0127 NC_016818.1 133727 136204 R PFAM: Bacterial cellulose synthase subunit; cellulose synthase subunit complement(133727..136204) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789866 YP_005198219.1 CDS Rahaq2_0128 NC_016818.1 136201 138300 R PFAM: Glycosyl transferase family 2; PilZ domain; Cellulose synthase; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); cellulose synthase catalytic subunit complement(136201..138300) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789867 YP_005198220.1 CDS Rahaq2_0129 NC_016818.1 138331 139134 R PFAM: YhjQ protein; TIGRFAM: cellulose synthase operon protein YhjQ; cellulose synthase operon protein YhjQ complement(138331..139134) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793753 YP_005198221.1 CDS Rahaq2_0130 NC_016818.1 139125 139904 R hypothetical protein complement(139125..139904) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789868 YP_005198222.1 CDS Rahaq2_0131 NC_016818.1 140464 142446 D PFAM: EAL domain; HAMP domain; GGDEF domain; EAL domain-containing protein 140464..142446 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793754 YP_005198223.1 CDS Rahaq2_0132 NC_016818.1 142683 143966 D PFAM: Sodium:dicarboxylate symporter family; Na+/H+ dicarboxylate symporter 142683..143966 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793755 YP_005198224.1 CDS Rahaq2_0133 NC_016818.1 144293 145810 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); putative Zn-dependent peptidase 144293..145810 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789869 YP_005198225.1 CDS Rahaq2_0134 NC_016818.1 145982 146920 R PFAM: pfkB family carbohydrate kinase; sugar kinase complement(145982..146920) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789870 YP_005198226.1 CDS Rahaq2_0135 NC_016818.1 147115 147318 R PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase complement(147115..147318) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793756 YP_005198227.1 CDS Rahaq2_0136 NC_016818.1 147656 148417 D PFAM: EAL domain; EAL domain-containing protein 147656..148417 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793757 YP_005198228.1 CDS Rahaq2_0137 NC_016818.1 148631 150685 D PFAM: AsmA family; hypothetical protein 148631..150685 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789871 YP_005198229.1 CDS Rahaq2_0138 NC_016818.1 150755 151522 R PFAM: CDP-diacylglycerol pyrophosphatase; TIGRFAM: CDP-diacylglycerol pyrophosphatase, bacterial type; CDP-diacylglycerol pyrophosphatase complement(150755..151522) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789872 YP_005198230.1 CDS Rahaq2_0139 NC_016818.1 151582 152904 R PFAM: Sugar (and other) transporter; Major Facilitator Superfamily; TIGRFAM: metabolite-proton symporter; metabolite-proton symporter complement(151582..152904) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789873 YP_005198231.1 CDS Rahaq2_0140 NC_016818.1 152973 153128 D hypothetical protein 152973..153128 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789874 YP_005198232.1 CDS Rahaq2_0141 NC_016818.1 153192 154316 R PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease, putative; ribonuclease, putative complement(153192..154316) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789875 YP_005198233.1 CDS Rahaq2_0142 NC_016818.1 154401 155342 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(154401..155342) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789876 YP_005198234.1 CDS Rahaq2_0143 NC_016818.1 155427 156185 D PFAM: short chain dehydrogenase; dehydrogenase 155427..156185 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789877 YP_005198235.1 CDS Rahaq2_0144 NC_016818.1 156189 156935 R PFAM: PilZ domain; YcgR protein; putative glycosyltransferase complement(156189..156935) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789878 YP_005198236.1 CDS Rahaq2_0145 NC_016818.1 157193 157771 D PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 157193..157771 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789879 YP_005198237.1 CDS Rahaq2_0146 NC_016818.1 157803 158345 D hypothetical protein 157803..158345 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789880 YP_005198238.1 CDS Rahaq2_0147 NC_016818.1 158426 158881 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 158426..158881 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789881 YP_005198239.1 CDS Rahaq2_0148 NC_016818.1 158878 159654 D hypothetical protein 158878..159654 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789882 YP_005198240.1 CDS Rahaq2_0149 NC_016818.1 159697 159822 R hypothetical protein complement(159697..159822) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789883 YP_005198241.1 CDS Rahaq2_0150 NC_016818.1 159958 161607 D PFAM: Malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase; malate:quinone-oxidoreductase 159958..161607 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789884 YP_005198242.1 CDS Rahaq2_0151 NC_016818.1 161793 164120 D PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; Rhs element Vgr protein 161793..164120 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789885 YP_005198243.1 CDS Rahaq2_0152 NC_016818.1 164121 164960 D hypothetical protein 164121..164960 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789886 YP_005198244.1 CDS Rahaq2_0153 NC_016818.1 164989 165498 D hypothetical protein 164989..165498 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789887 YP_005198245.1 CDS Rahaq2_0154 NC_016818.1 165511 166005 D hypothetical protein 165511..166005 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789888 YP_005198246.1 CDS Rahaq2_0155 NC_016818.1 166049 166579 D PFAM: Protein of unknown function (DUF3304); hypothetical protein 166049..166579 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789889 YP_005198247.1 CDS Rahaq2_0156 NC_016818.1 166600 167118 D PFAM: Protein of unknown function (DUF3304); hypothetical protein 166600..167118 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789890 YP_005198248.1 CDS Rahaq2_0157 NC_016818.1 167156 167674 D PFAM: Protein of unknown function (DUF3304); hypothetical protein 167156..167674 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789891 YP_005198249.1 CDS Rahaq2_0158 NC_016818.1 167710 168231 D PFAM: Protein of unknown function (DUF3304); hypothetical protein 167710..168231 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789892 YP_005198250.1 CDS Rahaq2_0159 NC_016818.1 168231 170021 D PFAM: Uncharacterized conserved protein (DUF2235); hypothetical protein 168231..170021 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793758 YP_005198251.1 CDS Rahaq2_0160 NC_016818.1 170394 172046 D PFAM: Malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase; malate:quinone-oxidoreductase 170394..172046 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789893 YP_005198252.1 CDS Rahaq2_0161 NC_016818.1 172560 173813 R PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family; probable hydroxymethylpyrimidine transporter CytX; putative hydroxymethylpyrimidine transporter CytX complement(172560..173813) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789894 YP_005198253.1 CDS Rahaq2_0162 NC_016818.1 173872 174033 D hypothetical protein 173872..174033 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789895 YP_005198254.1 CDS Rahaq2_0163 NC_016818.1 174238 175275 D virulence protein 174238..175275 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789896 YP_005198255.1 CDS Rahaq2_0164 NC_016818.1 175294 175950 R PFAM: Pentapeptide repeats (8 copies); putative low-complexity protein complement(175294..175950) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789897 YP_005198256.1 CDS Rahaq2_0165 NC_016818.1 176146 177075 D hypothetical protein 176146..177075 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789898 YP_005198257.1 CDS Rahaq2_0166 NC_016818.1 177234 179393 D PFAM: Peptidase family M3; Zn-dependent oligopeptidase 177234..179393 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789899 YP_005198258.1 CDS Rahaq2_0167 NC_016818.1 179544 180602 D PFAM: Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; O-6-methylguanine DNA methyltransferase 179544..180602 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789900 YP_005198259.1 CDS Rahaq2_0169 NC_016818.1 180772 181986 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(180772..181986) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789902 YP_005198260.1 CDS Rahaq2_0170 NC_016818.1 182119 182820 R PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region; transcriptional regulator complement(182119..182820) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789903 YP_005198261.1 CDS Rahaq2_0171 NC_016818.1 182905 184404 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 182905..184404 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789904 YP_005198262.1 CDS Rahaq2_0172 NC_016818.1 184507 186360 D PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase/permease 184507..186360 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789905 YP_005198263.1 CDS Rahaq2_0173 NC_016818.1 186370 187497 R PFAM: Protein of unknown function, DUF482; hypothetical protein complement(186370..187497) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789906 YP_005198264.1 CDS Rahaq2_0174 NC_016818.1 187681 188316 R PFAM: Carbonic anhydrase; carbonic anhydrase complement(187681..188316) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789907 YP_005198265.1 CDS Rahaq2_0175 NC_016818.1 188537 189079 D PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-S-sulfoxide reductase 188537..189079 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789908 YP_005198266.1 CDS Rahaq2_0176 NC_016818.1 189150 189332 R PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase complement(189150..189332) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789909 YP_005198267.1 CDS Rahaq2_0177 NC_016818.1 189452 189769 R hypothetical protein complement(189452..189769) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789910 YP_005198268.1 CDS Rahaq2_0178 NC_016818.1 189791 191056 R PFAM: PTS system sugar-specific permease component; hypothetical protein complement(189791..191056) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789911 YP_005198269.1 CDS Rahaq2_0179 NC_016818.1 191129 191431 R PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; PTS system galactitol-specific transporter subunit IIB complement(191129..191431) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789912 YP_005198270.1 CDS Rahaq2_0180 NC_016818.1 191497 191940 R PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) complement(191497..191940) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789913 YP_005198271.1 CDS Rahaq2_0181 NC_016818.1 192147 192743 R putative kinase complement(192147..192743) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793759 YP_005198272.1 CDS Rahaq2_0182 NC_016818.1 192736 193671 R PFAM: DeoC/LacD family aldolase; tagatose-1,6-bisphosphate aldolase complement(192736..193671) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789914 YP_005198273.1 CDS Rahaq2_0183 NC_016818.1 193905 194840 D PFAM: Sigma-70, region 4; Putative sugar-binding domain; transcriptional regulator with sigma factor-related N-terminal domain 193905..194840 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789915 YP_005198274.1 CDS Rahaq2_0184 NC_016818.1 194935 195765 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(194935..195765) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793760 YP_005198275.1 CDS Rahaq2_0185 NC_016818.1 196093 196734 D PFAM: Isochorismatase family; nicotinamidase-like amidase 196093..196734 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789916 YP_005198276.1 CDS Rahaq2_0186 NC_016818.1 196797 197216 D PFAM: DoxX; hypothetical protein 196797..197216 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789917 YP_005198277.1 CDS Rahaq2_0187 NC_016818.1 197213 198799 D PFAM: Bacterial protein of unknown function (DUF894); arabinose efflux permease family protein 197213..198799 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789918 YP_005198278.1 CDS Rahaq2_0188 NC_016818.1 198839 199747 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(198839..199747) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789919 YP_005198279.1 CDS Rahaq2_0189 NC_016818.1 199887 200195 D hypothetical protein 199887..200195 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793761 YP_005198280.1 CDS Rahaq2_0190 NC_016818.1 200317 201168 D PFAM: GIY-YIG catalytic domain; putative endonuclease 200317..201168 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793762 YP_005198281.1 CDS Rahaq2_0191 NC_016818.1 201180 201827 R hypothetical protein complement(201180..201827) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789920 YP_005198282.1 CDS Rahaq2_0192 NC_016818.1 201997 203349 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: glutathione-disulfide reductase, animal/bacterial; glutathione-disulfide reductase complement(201997..203349) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793763 YP_005198283.1 CDS Rahaq2_0193 NC_016818.1 203514 204356 R PFAM: Protein of unknown function (DUF519); protein involved in catabolism of external DNA complement(203514..204356) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789921 YP_005198284.1 CDS Rahaq2_0194 NC_016818.1 204538 206598 D PFAM: Peptidase family M3; Zn-dependent oligopeptidase 204538..206598 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789922 YP_005198285.1 CDS Rahaq2_0195 NC_016818.1 206608 207354 D PFAM: Protein of unknown function (DUF548); hypothetical protein 206608..207354 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789923 YP_005198286.1 CDS Rahaq2_0196 NC_016818.1 207433 207795 R hypothetical protein complement(207433..207795) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789924 YP_005198287.1 CDS Rahaq2_0197 NC_016818.1 208075 208515 R PFAM: Universal stress protein family; universal stress protein UspA-like protein complement(208075..208515) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789925 YP_005198288.1 CDS Rahaq2_0198 NC_016818.1 208853 209188 D PFAM: Universal stress protein B (UspB); Universal stress protein B (UspB) 208853..209188 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789926 YP_005198289.1 CDS Rahaq2_0200 NC_016818.1 209403 210908 R PFAM: Phosphate transporter family; phosphate/sulfate permease complement(209403..210908) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789928 YP_005198290.1 CDS Rahaq2_0201 NC_016818.1 211220 212443 D PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; flavoprotein 211220..212443 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789929 YP_005198291.1 CDS Rahaq2_0202 NC_016818.1 212574 212750 D hypothetical protein 212574..212750 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789930 YP_005198292.1 CDS Rahaq2_0204 NC_016818.1 213359 214570 D PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C 213359..214570 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793764 YP_005198293.1 CDS Rahaq2_0205 NC_016818.1 214572 216278 R PFAM: Acyltransferase; putative hemolysin complement(214572..216278) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789932 YP_005198294.1 CDS Rahaq2_0206 NC_016818.1 216477 217703 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 216477..217703 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789933 YP_005198295.1 CDS Rahaq2_0207 NC_016818.1 217700 218209 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase complement(217700..218209) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789934 YP_005198296.1 CDS Rahaq2_0209 NC_016818.1 218663 219031 D hypothetical protein 218663..219031 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789936 YP_005198297.1 CDS Rahaq2_0210 NC_016818.1 219031 219516 D hypothetical protein 219031..219516 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789937 YP_005198298.1 CDS Rahaq2_0211 NC_016818.1 219780 221630 R hypothetical protein complement(219780..221630) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789938 YP_005198299.1 CDS Rahaq2_0212 NC_016818.1 221674 223770 R hypothetical protein complement(221674..223770) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789939 YP_005198300.1 CDS Rahaq2_0213 NC_016818.1 224009 224704 D PFAM: Pirin; Pirin-like protein 224009..224704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789940 YP_005198301.1 CDS Rahaq2_0214 NC_016818.1 224768 226024 R PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain; outer membrane autotransporter barrel domain-containing protein complement(224768..226024) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789941 YP_005198302.1 CDS Rahaq2_0215 NC_016818.1 226426 226749 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component; PTS system cellobiose-specific transporter subunit IIB 226426..226749 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789942 YP_005198303.1 CDS Rahaq2_0216 NC_016818.1 226746 228074 D PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component; PTS system, lactose/cellobiose family IIC component 226746..228074 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789943 YP_005198304.1 CDS Rahaq2_0217 NC_016818.1 228121 229503 D PFAM: Glycosyl hydrolase family 1; beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase 228121..229503 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789944 YP_005198305.1 CDS Rahaq2_0218 NC_016818.1 229517 230434 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 229517..230434 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789945 YP_005198306.1 CDS Rahaq2_0219 NC_016818.1 230535 231536 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 230535..231536 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789946 YP_005198307.1 CDS Rahaq2_0220 NC_016818.1 231691 232197 D hypothetical protein 231691..232197 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789947 YP_005198308.1 CDS Rahaq2_0221 NC_016818.1 232224 233024 D PFAM: Integrase core domain; transposase 232224..233024 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789948 YP_005198309.1 CDS Rahaq2_0222 NC_016818.1 233075 233590 R PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; thermoresistant glucokinase family carbohydrate kinase complement(233075..233590) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789949 YP_005198310.1 CDS Rahaq2_0223 NC_016818.1 233836 235152 D PFAM: GntP family permease; TIGRFAM: gluconate transporter; gluconate transporter 233836..235152 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789950 YP_005198311.1 CDS Rahaq2_0224 NC_016818.1 235215 235808 R PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; membrane protein, MarC family complement(235215..235808) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789951 YP_005198312.1 CDS Rahaq2_0225 NC_016818.1 236019 237122 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase, gamma-proteobacterial; aspartate-semialdehyde dehydrogenase 236019..237122 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789952 YP_005198313.1 CDS Rahaq2_0226 NC_016818.1 237534 239717 D PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 237534..239717 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789953 YP_005198314.1 CDS Rahaq2_0227 NC_016818.1 239717 241741 D PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; glycogen debranching protein GlgX 239717..241741 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789954 YP_005198315.1 CDS Rahaq2_0228 NC_016818.1 241759 243036 D PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 241759..243036 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789955 YP_005198316.1 CDS Rahaq2_0229 NC_016818.1 243108 244544 D PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase 243108..244544 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789956 YP_005198317.1 CDS Rahaq2_0230 NC_016818.1 244582 247029 D PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen/starch/alpha-glucan phosphorylase 244582..247029 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789957 YP_005198318.1 CDS Rahaq2_0231 NC_016818.1 247263 248774 R PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase complement(247263..248774) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789958 YP_005198319.1 CDS Rahaq2_0232 NC_016818.1 249048 249806 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(249048..249806) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789959 YP_005198320.1 CDS Rahaq2_0233 NC_016818.1 249816 250649 R PFAM: Protein of unknown function (DUF3582); Rhomboid family; membrane protein complement(249816..250649) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789960 YP_005198321.1 CDS Rahaq2_0234 NC_016818.1 250949 252139 R PFAM: Cys/Met metabolism PLP-dependent enzyme; cystathionine beta-lyase/cystathionine gamma-synthase complement(250949..252139) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789961 YP_005198322.1 CDS Rahaq2_0235 NC_016818.1 252282 252602 R PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase complement(252282..252602) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789962 YP_005198323.1 CDS Rahaq2_0236 NC_016818.1 252687 253442 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(252687..253442) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789963 YP_005198324.1 CDS Rahaq2_0237 NC_016818.1 253671 254735 R putative Zn-dependent hydrolase of beta-lactamase fold protein complement(253671..254735) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793765 YP_005198325.1 CDS Rahaq2_0238 NC_016818.1 255160 256563 D PFAM: PTS system sugar-specific permease component; hypothetical protein 255160..256563 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789964 YP_005198326.1 CDS Rahaq2_0239 NC_016818.1 256620 256928 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; PTS system galactitol-specific transporter subunit IIB 256620..256928 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789965 YP_005198327.1 CDS Rahaq2_0240 NC_016818.1 256939 257409 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) 256939..257409 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789966 YP_005198328.1 CDS Rahaq2_0241 NC_016818.1 257433 258089 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; 3-hexulose-6-phosphate synthase family protein 257433..258089 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789967 YP_005198329.1 CDS Rahaq2_0242 NC_016818.1 258100 258960 D PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hexulose-6-phosphate isomerase, putative; hexulose-6-phosphate isomerase, putative 258100..258960 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793766 YP_005198330.1 CDS Rahaq2_0243 NC_016818.1 258957 259646 D PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; ribulose-5-phosphate 4-epimerase-like epimerase or aldolase 258957..259646 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789968 YP_005198331.1 CDS Rahaq2_0244 NC_016818.1 259831 262245 D PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen/starch/alpha-glucan phosphorylase 259831..262245 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789969 YP_005198332.1 CDS Rahaq2_0245 NC_016818.1 262254 264380 D PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 262254..264380 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789970 YP_005198333.1 CDS Rahaq2_0246 NC_016818.1 264553 265128 R PFAM: Iron-sulphur cluster biosynthesis; NifU-like domain; TIGRFAM: IscR-regulated protein YhgI; IscR-regulated protein YhgI complement(264553..265128) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789971 YP_005198334.1 CDS Rahaq2_0247 NC_016818.1 265226 265915 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; putative amidophosphoribosyltransferase complement(265226..265915) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789972 YP_005198335.1 CDS Rahaq2_0248 NC_016818.1 265962 266732 D PFAM: alpha/beta hydrolase fold; TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH; putative pimeloyl-BioC--CoA transferase BioH 265962..266732 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789973 YP_005198336.1 CDS Rahaq2_0249 NC_016818.1 266965 267234 D PFAM: Protein of unknown function (DUF1471); hypothetical protein 266965..267234 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789974 YP_005198337.1 CDS Rahaq2_0250 NC_016818.1 267543 269204 D TIGRFAM: malonate decarboxylase, alpha subunit; malonate decarboxylase subunit alpha 267543..269204 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789975 YP_005198338.1 CDS Rahaq2_0251 NC_016818.1 269207 270067 D PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; triphosphoribosyl-dephospho-CoA synthase MdcB 269207..270067 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789976 YP_005198339.1 CDS Rahaq2_0252 NC_016818.1 270108 270410 D PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: malonate decarboxylase acyl carrier protein; malonate decarboxylase acyl carrier protein 270108..270410 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789977 YP_005198340.1 CDS Rahaq2_0253 NC_016818.1 270400 271251 D PFAM: Carboxyl transferase domain; TIGRFAM: malonate decarboxylase, beta subunit; malonate decarboxylase subunit beta 270400..271251 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789978 YP_005198341.1 CDS Rahaq2_0254 NC_016818.1 271248 272063 D PFAM: Malonate decarboxylase gamma subunit (MdcE); TIGRFAM: malonate decarboxylase, gamma subunit; malonate decarboxylase subunit gamma 271248..272063 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789979 YP_005198342.1 CDS Rahaq2_0255 NC_016818.1 272254 273216 D PFAM: Membrane transport protein; TIGRFAM: he Auxin Efflux Carrier (AEC) Family; putative permease 272254..273216 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789980 YP_005198343.1 CDS Rahaq2_0256 NC_016818.1 273234 273860 D PFAM: Phosphoribosyl-dephospho-CoA transferase MdcG; TIGRFAM: malonate decarboxylase holo-[acyl-carrier-protein] synthase; malonate decarboxylase holo-(acyl-carrier-protein) synthase 273234..273860 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789981 YP_005198344.1 CDS Rahaq2_0257 NC_016818.1 273888 274823 D PFAM: Acyl transferase domain; TIGRFAM: malonate decarboxylase, epsilon subunit; malonate decarboxylase subunit epsilon 273888..274823 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793767 YP_005198345.1 CDS Rahaq2_0258 NC_016818.1 274924 275163 D hypothetical protein 274924..275163 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789982 YP_005198346.1 CDS Rahaq2_0259 NC_016818.1 275147 275413 D PFAM: Protein of unknown function (DUF3532); hypothetical protein 275147..275413 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789983 YP_005198347.1 CDS Rahaq2_0260 NC_016818.1 275393 276313 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(275393..276313) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789984 YP_005198348.1 CDS Rahaq2_0261 NC_016818.1 276383 276622 R PFAM: FeoC like transcriptional regulator; FeoC like transcriptional regulator complement(276383..276622) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789985 YP_005198349.1 CDS Rahaq2_0262 NC_016818.1 276631 278949 R PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transporter FeoB complement(276631..278949) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793768 YP_005198350.1 CDS Rahaq2_0263 NC_016818.1 279037 279261 R PFAM: FeoA domain; Fe2+ transport system protein A complement(279037..279261) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793769 YP_005198351.1 CDS Rahaq2_0264 NC_016818.1 279289 279486 D hypothetical protein 279289..279486 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789986 YP_005198352.1 CDS Rahaq2_0265 NC_016818.1 279694 282024 R PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; transcriptional accessory protein complement(279694..282024) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789987 YP_005198353.1 CDS Rahaq2_0266 NC_016818.1 282136 282609 R PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB; transcription elongation factor GreB complement(282136..282609) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789988 YP_005198354.1 CDS Rahaq2_0267 NC_016818.1 282840 288857 D PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain; large extracellular alpha-helical protein 282840..288857 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789989 YP_005198355.1 CDS Rahaq2_0268 NC_016818.1 288914 291283 D PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C; penicillin-binding protein 1C 288914..291283 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789990 YP_005198356.1 CDS Rahaq2_0269 NC_016818.1 291298 292413 R hypothetical protein complement(291298..292413) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789991 YP_005198357.1 CDS Rahaq2_0270 NC_016818.1 292423 294966 R PFAM: Fimbrial Usher protein; P pilus assembly protein, porin PapC complement(292423..294966) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789992 YP_005198358.1 CDS Rahaq2_0271 NC_016818.1 295039 295725 R PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD complement(295039..295725) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789993 YP_005198359.1 CDS Rahaq2_0272 NC_016818.1 295831 296379 R PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA complement(295831..296379) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789994 YP_005198360.1 CDS Rahaq2_0273 NC_016818.1 296967 297686 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 296967..297686 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789995 YP_005198361.1 CDS Rahaq2_0274 NC_016818.1 297683 299044 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 297683..299044 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789996 YP_005198362.1 CDS Rahaq2_0276 NC_016818.1 299395 301017 R PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); ATP-dependent phosphoenolpyruvate carboxykinase complement(299395..301017) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789998 YP_005198363.1 CDS Rahaq2_0277 NC_016818.1 301245 302129 R PFAM: Hsp33 protein; disulfide bond chaperone complement(301245..302129) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793770 YP_005198364.1 CDS Rahaq2_0278 NC_016818.1 302188 302592 R PFAM: S4 domain; ribosome-associated heat shock protein complement(302188..302592) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789999 YP_005198365.1 CDS Rahaq2_0279 NC_016818.1 302617 303306 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily protein complement(302617..303306) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790000 YP_005198366.1 CDS Rahaq2_0280 NC_016818.1 303419 305551 R PFAM: Intracellular growth attenuator protein IgaA; Intracellular growth attenuator protein IgaA complement(303419..305551) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790001 YP_005198367.1 CDS Rahaq2_0281 NC_016818.1 306009 306566 D PFAM: NUDIX domain; NTP pyrophosphohydrolase 306009..306566 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790002 YP_005198368.1 CDS Rahaq2_0282 NC_016818.1 306640 309195 R PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; penicillin-binding protein complement(306640..309195) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793771 YP_005198369.1 CDS Rahaq2_0283 NC_016818.1 309317 310168 D PFAM: Competence protein A; Competence protein A 309317..310168 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793772 YP_005198370.1 CDS Rahaq2_0284 NC_016818.1 310168 310731 D PFAM: Fimbrial assembly protein (PilN); Tfp pilus assembly protein PilN 310168..310731 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790003 YP_005198371.1 CDS Rahaq2_0285 NC_016818.1 310728 311588 D PFAM: Protein of unknown function (DUF2531); Tfp pilus assembly protein PilO 310728..311588 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790004 YP_005198372.1 CDS Rahaq2_0286 NC_016818.1 311588 312850 D PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type IV pilus secretin PilQ/competence protein 311588..312850 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790005 YP_005198373.1 CDS Rahaq2_0287 NC_016818.1 313199 313720 D PFAM: Shikimate kinase; shikimate kinase 313199..313720 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790006 YP_005198374.1 CDS Rahaq2_0288 NC_016818.1 313778 314860 D PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 313778..314860 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790007 YP_005198375.1 CDS Rahaq2_0289 NC_016818.1 314988 316037 D PFAM: Sporulation related domain; hypothetical protein 314988..316037 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790008 YP_005198376.1 CDS Rahaq2_0290 NC_016818.1 316118 316933 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); DNA adenine methylase Dam 316118..316933 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790009 YP_005198377.1 CDS Rahaq2_0291 NC_016818.1 316984 317661 D PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 316984..317661 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790010 YP_005198378.1 CDS Rahaq2_0292 NC_016818.1 317654 318352 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; 2-phosphoglycolate phosphatase 317654..318352 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790011 YP_005198379.1 CDS Rahaq2_0293 NC_016818.1 318354 319370 D PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 318354..319370 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790012 YP_005198380.1 CDS Rahaq2_0294 NC_016818.1 319459 320844 R PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; uroporphyrin-III C-methyltransferase complement(319459..320844) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790013 YP_005198381.1 CDS Rahaq2_0295 NC_016818.1 320905 321258 R TIGRFAM: nitrite reductase [NAD(P)H], small subunit; NAD(P)H-dependent nitrite reductase, small subunit complement(320905..321258) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790014 YP_005198382.1 CDS Rahaq2_0296 NC_016818.1 321255 323804 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; NAD(P)H-dependent nitrite reductase, large subunit complement(321255..323804) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790015 YP_005198383.1 CDS Rahaq2_0297 NC_016818.1 324028 325311 D PFAM: Amidohydrolase family; cytosine deaminase 324028..325311 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790016 YP_005198384.1 CDS Rahaq2_0298 NC_016818.1 325457 326023 D PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase 325457..326023 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790017 YP_005198385.1 CDS Rahaq2_0299 NC_016818.1 326562 327767 D hypothetical protein 326562..327767 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790018 YP_005198386.1 CDS Rahaq2_0300 NC_016818.1 327865 328035 D PFAM: Protein of unknown function (DUF2559); hypothetical protein 327865..328035 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790019 YP_005198387.1 CDS Rahaq2_0301 NC_016818.1 328025 328627 D PFAM: Fic/DOC family; protein involved in cell division 328025..328627 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790020 YP_005198388.1 CDS Rahaq2_0302 NC_016818.1 328704 329279 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 328704..329279 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793773 YP_005198389.1 CDS Rahaq2_0303 NC_016818.1 329403 330620 D PFAM: Aminotransferase class-III; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferases; acetylornithine/succinylornithine aminotransferase 329403..330620 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793774 YP_005198390.1 CDS Rahaq2_0304 NC_016818.1 331290 333365 R PFAM: Fusaric acid resistance protein family; TIGRFAM: integral membrane protein, YccS/YhfK family; YccS/YhfK family integral membrane protein complement(331290..333365) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790021 YP_005198391.1 CDS Rahaq2_0305 NC_016818.1 333427 334059 R PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; cAMP-binding protein complement(333427..334059) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790022 YP_005198392.1 CDS Rahaq2_0306 NC_016818.1 334423 334830 D PFAM: OsmC-like protein; putative redox protein, regulator of disulfide bond formation 334423..334830 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790023 YP_005198393.1 CDS Rahaq2_0307 NC_016818.1 334834 335703 R PFAM: Phosphoribulokinase / Uridine kinase family; phosphoribulokinase complement(334834..335703) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790024 YP_005198394.1 CDS Rahaq2_0308 NC_016818.1 335839 336753 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(335839..336753) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790025 YP_005198395.1 CDS Rahaq2_0309 NC_016818.1 336821 337474 D PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase 336821..337474 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790026 YP_005198396.1 CDS Rahaq2_0310 NC_016818.1 337561 338370 D PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; transcriptional regulator 337561..338370 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790027 YP_005198397.1 CDS Rahaq2_0311 NC_016818.1 338485 340266 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: glyoxylate carboligase; glyoxylate carboligase 338485..340266 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790028 YP_005198398.1 CDS Rahaq2_0312 NC_016818.1 340281 341057 D PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hydroxypyruvate isomerase; hydroxypyruvate isomerase 340281..341057 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790029 YP_005198399.1 CDS Rahaq2_0313 NC_016818.1 341149 342027 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase 341149..342027 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790030 YP_005198400.1 CDS Rahaq2_0314 NC_016818.1 342103 343557 D PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family; NCS1 nucleoside transporter-like protein 342103..343557 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790031 YP_005198401.1 CDS Rahaq2_0315 NC_016818.1 343640 345001 D PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase, multifunctional complex type; allantoinase 343640..345001 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790032 YP_005198402.1 CDS Rahaq2_0316 NC_016818.1 345064 346368 D PFAM: Permease family; xanthine/uracil permease 345064..346368 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790033 YP_005198403.1 CDS Rahaq2_0317 NC_016818.1 346419 347210 R PFAM: Cupin domain; Protein of unknown function (DUF861); TIGRFAM: putative allantoin catabolism protein; putative allantoin catabolism protein complement(346419..347210) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790034 YP_005198404.1 CDS Rahaq2_0318 NC_016818.1 347233 348459 R PFAM: Peptidase family M20/M25/M40; TIGRFAM: allantoate amidohydrolase; amidase, hydantoinase/carbamoylase family; allantoate amidohydrolase complement(347233..348459) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790035 YP_005198405.1 CDS Rahaq2_0319 NC_016818.1 348481 349530 R PFAM: Malate/L-lactate dehydrogenase; TIGRFAM: ureidoglycolate dehydrogenase; ureidoglycolate dehydrogenase complement(348481..349530) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790036 YP_005198406.1 CDS Rahaq2_0320 NC_016818.1 349828 351495 D PFAM: CoA binding domain; CoA-ligase; succinyl-CoA synthetase subunit alpha 349828..351495 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793775 YP_005198407.1 CDS Rahaq2_0321 NC_016818.1 351530 352798 D PFAM: Protein of unknown function (DUF1116); hypothetical protein 351530..352798 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790037 YP_005198408.1 CDS Rahaq2_0322 NC_016818.1 352795 353556 D PFAM: Protein of unknown function (DUF2877); hypothetical protein 352795..353556 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790038 YP_005198409.1 CDS Rahaq2_0323 NC_016818.1 353566 354465 D PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase; carbamate kinase 353566..354465 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793776 YP_005198410.1 CDS Rahaq2_0324 NC_016818.1 354497 354742 R PFAM: Uncharacterised protein family (UPF0270); hypothetical protein complement(354497..354742) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790039 YP_005198411.1 CDS Rahaq2_0325 NC_016818.1 354739 355734 R PFAM: alpha/beta hydrolase fold; putative hydrolase of the alpha/beta-hydrolase fold protein complement(354739..355734) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790040 YP_005198412.1 CDS Rahaq2_0326 NC_016818.1 355835 356437 D PFAM: LysE type translocator; putative threonine efflux protein 355835..356437 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790041 YP_005198413.1 CDS Rahaq2_0327 NC_016818.1 356492 358411 R PFAM: ABC transporter; ABC transporter ATPase complement(356492..358411) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790042 YP_005198414.1 CDS Rahaq2_0328 NC_016818.1 358541 359095 D PFAM: Flavodoxin-like fold; putative NADPH-quinone reductase (modulator of drug activity B) 358541..359095 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790043 YP_005198415.1 CDS Rahaq2_0329 NC_016818.1 359095 360903 D PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; transporter, monovalent cation:proton antiporter-2 (CPA2) family 359095..360903 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790044 YP_005198416.1 CDS Rahaq2_0330 NC_016818.1 360982 361185 D PFAM: Probable metal-binding protein (DUF2387); TIGRFAM: conserved hypothetical metal-binding protein; hypothetical protein 360982..361185 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790045 YP_005198417.1 CDS Rahaq2_0331 NC_016818.1 361384 361971 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase 361384..361971 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790046 YP_005198418.1 CDS Rahaq2_0332 NC_016818.1 362036 362254 R PFAM: SlyX; hypothetical protein complement(362036..362254) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793777 YP_005198419.1 CDS Rahaq2_0333 NC_016818.1 362548 363408 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase 362548..363408 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790047 YP_005198420.1 CDS Rahaq2_0334 NC_016818.1 363672 364394 D PFAM: YheO-like PAS domain; hypothetical protein 363672..364394 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790048 YP_005198421.1 CDS Rahaq2_0335 NC_016818.1 364391 364783 D PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusD/DsrE; sulfur relay protein TusD/DsrE 364391..364783 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793778 YP_005198422.1 CDS Rahaq2_0336 NC_016818.1 364806 365165 D PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusC/DsrF; sulfur relay protein TusC/DsrF 364806..365165 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790049 YP_005198423.1 CDS Rahaq2_0337 NC_016818.1 365179 365466 D PFAM: DsrH like protein; TIGRFAM: sulfur relay protein TusB/DsrH; sulfur relay protein TusB/DsrH 365179..365466 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790050 YP_005198424.1 CDS Rahaq2_0338 NC_016818.1 365610 365984 D PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 365610..365984 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790051 YP_005198425.1 CDS Rahaq2_0339 NC_016818.1 366081 366551 D PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 366081..366551 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790052 YP_005198426.1 CDS Rahaq2_0340 NC_016818.1 366648 368762 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor EF-G 366648..368762 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793779 YP_005198427.1 CDS Rahaq2_0341 NC_016818.1 368834 370018 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor TU 368834..370018 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790053 YP_005198428.1 CDS Rahaq2_0342 NC_016818.1 370304 372508 D PFAM: Glycosyl hydrolases family 18; chitinase 370304..372508 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790054 YP_005198429.1 CDS Rahaq2_0343 NC_016818.1 372679 372873 D PFAM: BFD-like [2Fe-2S] binding domain; manually curated; bacterioferritin-associated ferredoxin 372679..372873 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793780 YP_005198430.1 CDS Rahaq2_0344 NC_016818.1 372959 373438 D PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; bacterioferritin 372959..373438 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790055 YP_005198431.1 CDS Rahaq2_0345 NC_016818.1 373450 374283 R PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; prepilin signal peptidase PulO-like peptidase complement(373450..374283) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790056 YP_005198432.1 CDS Rahaq2_0346 NC_016818.1 374301 374759 R PFAM: General secretion pathway, M protein; type II secretory pathway, component PulM complement(374301..374759) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793781 YP_005198433.1 CDS Rahaq2_0347 NC_016818.1 374756 375931 R PFAM: General secretion pathway protein L (GspL); TIGRFAM: general secretion pathway protein L; general secretion pathway protein L complement(374756..375931) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790057 YP_005198434.1 CDS Rahaq2_0348 NC_016818.1 375932 376918 R PFAM: General secretion pathway protein K; type II secretory pathway, component PulK complement(375932..376918) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790058 YP_005198435.1 CDS Rahaq2_0349 NC_016818.1 376911 377594 R PFAM: Prokaryotic N-terminal methylation motif; Pseudopilin GspJ; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein J; general secretion pathway protein J complement(376911..377594) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790059 YP_005198436.1 CDS Rahaq2_0350 NC_016818.1 377591 377980 R PFAM: Bacterial type II secretion system protein I/J; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein I; general secretion pathway protein I complement(377591..377980) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790060 YP_005198437.1 CDS Rahaq2_0351 NC_016818.1 377980 378501 R PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H; general secretion pathway protein H complement(377980..378501) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790061 YP_005198438.1 CDS Rahaq2_0352 NC_016818.1 378504 378959 R PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein G complement(378504..378959) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790062 YP_005198439.1 CDS Rahaq2_0353 NC_016818.1 378972 380189 R PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F; general secretion pathway protein F complement(378972..380189) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790063 YP_005198440.1 CDS Rahaq2_0354 NC_016818.1 380186 381712 R PFAM: Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E; general secretory pathway protein E complement(380186..381712) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790064 YP_005198441.1 CDS Rahaq2_0355 NC_016818.1 381716 383701 R PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D; type IV pilus secretin (or competence protein) PilQ; general secretion pathway protein D complement(381716..383701) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790065 YP_005198442.1 CDS Rahaq2_0356 NC_016818.1 383685 384518 R TIGRFAM: general secretion pathway protein C; general secretion pathway protein C complement(383685..384518) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790066 YP_005198443.1 CDS Rahaq2_0357 NC_016818.1 384719 386239 D PFAM: Putative peptidoglycan binding domain; type II secretory pathway protein ExeA 384719..386239 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790067 YP_005198444.1 CDS Rahaq2_0358 NC_016818.1 386247 386732 D hypothetical protein 386247..386732 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793782 YP_005198445.1 CDS Rahaq2_0359 NC_016818.1 386967 387278 D PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 386967..387278 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790068 YP_005198446.1 CDS Rahaq2_0360 NC_016818.1 387312 387941 D PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 387312..387941 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790069 YP_005198447.1 CDS Rahaq2_0361 NC_016818.1 387958 388563 D PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 387958..388563 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790070 YP_005198448.1 CDS Rahaq2_0362 NC_016818.1 388560 388862 D PFAM: Ribosomal protein L23; 50S ribosomal protein L23 388560..388862 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790071 YP_005198449.1 CDS Rahaq2_0363 NC_016818.1 388881 389705 D PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 388881..389705 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790072 YP_005198450.1 CDS Rahaq2_0364 NC_016818.1 389720 389998 D PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 389720..389998 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790073 YP_005198451.1 CDS Rahaq2_0365 NC_016818.1 390013 390345 D PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 390013..390345 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790074 YP_005198452.1 CDS Rahaq2_0366 NC_016818.1 390363 391061 D PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 390363..391061 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790075 YP_005198453.1 CDS Rahaq2_0367 NC_016818.1 391074 391484 D PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 391074..391484 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790076 YP_005198454.1 CDS Rahaq2_0368 NC_016818.1 391484 391675 D PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 391484..391675 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790077 YP_005198455.1 CDS Rahaq2_0369 NC_016818.1 391675 391929 D PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 391675..391929 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790078 YP_005198456.1 CDS Rahaq2_0370 NC_016818.1 392100 392471 D PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 392100..392471 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790079 YP_005198457.1 CDS Rahaq2_0371 NC_016818.1 392482 392796 D PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 392482..392796 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790080 YP_005198458.1 CDS Rahaq2_0372 NC_016818.1 392811 393350 D PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 392811..393350 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790081 YP_005198459.1 CDS Rahaq2_0373 NC_016818.1 393364 393669 D PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 393364..393669 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790082 YP_005198460.1 CDS Rahaq2_0374 NC_016818.1 393703 394095 D PFAM: Ribosomal protein S8; 30S ribosomal protein S8 393703..394095 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790083 YP_005198461.1 CDS Rahaq2_0375 NC_016818.1 394109 394642 D PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 394109..394642 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790084 YP_005198462.1 CDS Rahaq2_0376 NC_016818.1 394652 395005 D PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 394652..395005 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790085 YP_005198463.1 CDS Rahaq2_0377 NC_016818.1 395020 395520 D PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 395020..395520 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790086 YP_005198464.1 CDS Rahaq2_0378 NC_016818.1 395527 395706 D PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 395527..395706 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790087 YP_005198465.1 CDS Rahaq2_0379 NC_016818.1 395710 396144 D PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 395710..396144 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790088 YP_005198466.1 CDS Rahaq2_0380 NC_016818.1 396152 397483 D PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; preprotein translocase subunit SecY 396152..397483 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790089 YP_005198467.1 CDS Rahaq2_0381 NC_016818.1 397517 397633 D PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 397517..397633 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790090 YP_005198468.1 CDS Rahaq2_0383 NC_016818.1 397782 398138 D PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; manually curated; 30S ribosomal protein S13 397782..398138 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790091 YP_005198469.1 CDS Rahaq2_0384 NC_016818.1 398156 398545 D PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 398156..398545 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793783 YP_005198470.1 CDS Rahaq2_0385 NC_016818.1 398576 399196 D PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 398576..399196 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790092 YP_005198471.1 CDS Rahaq2_0386 NC_016818.1 399222 400211 D PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 399222..400211 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790093 YP_005198472.1 CDS Rahaq2_0387 NC_016818.1 400252 400641 D PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 400252..400641 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793784 YP_005198473.1 CDS Rahaq2_0388 NC_016818.1 400649 401185 D PFAM: Domain of unknown function (DUF1992); hypothetical protein 400649..401185 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790094 YP_005198474.1 CDS Rahaq2_0389 NC_016818.1 401188 401604 D PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Zn(II)-responsive transcriptional regulator; Zn(II)-responsive transcriptional regulator 401188..401604 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790095 YP_005198475.1 CDS Rahaq2_0390 NC_016818.1 401711 401911 D PFAM: Domain of unknown function; hypothetical protein 401711..401911 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790096 YP_005198476.1 CDS Rahaq2_0391 NC_016818.1 401936 402352 R PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein complement(401936..402352) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790097 YP_005198477.1 CDS Rahaq2_0392 NC_016818.1 402465 403841 R PFAM: TrkA-N domain; TrkA-C domain; K+ transport system, NAD-binding component complement(402465..403841) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790098 YP_005198478.1 CDS Rahaq2_0393 NC_016818.1 403902 405191 R PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; ribosomal RNA small subunit methyltransferase RsmB complement(403902..405191) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790099 YP_005198479.1 CDS Rahaq2_0394 NC_016818.1 405267 406202 R PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(405267..406202) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790100 YP_005198480.1 CDS Rahaq2_0395 NC_016818.1 406228 406740 R PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase complement(406228..406740) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790101 YP_005198481.1 CDS Rahaq2_0396 NC_016818.1 406869 408038 D PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; DNA protecting protein DprA 406869..408038 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793785 YP_005198482.1 CDS Rahaq2_0397 NC_016818.1 408010 408483 D PFAM: Protein of unknown function (DUF494); hypothetical protein 408010..408483 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790102 YP_005198483.1 CDS Rahaq2_0398 NC_016818.1 408508 409068 D PFAM: Topoisomerase DNA binding C4 zinc finger; Zn-finger domain-containing protein (topoisomerase type I-like) 408508..409068 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790103 YP_005198484.1 CDS Rahaq2_0399 NC_016818.1 409061 409630 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; putative translation factor 409061..409630 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790104 YP_005198485.1 CDS Rahaq2_0400 NC_016818.1 409634 410461 D PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 409634..410461 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793786 YP_005198486.1 CDS Rahaq2_0401 NC_016818.1 410513 411055 R carbonic anhydrase/acetyltransferase complement(410513..411055) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790105 YP_005198487.1 CDS Rahaq2_0409 NC_016818.1 417264 418931 R PFAM: Sodium:solute symporter family; TIGRFAM: cation/acetate symporter ActP; transporter, SSS family; cation/acetate symporter ActP complement(417264..418931) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790111 YP_005198488.1 CDS Rahaq2_0410 NC_016818.1 418928 419239 R PFAM: Protein of unknown function, DUF485; hypothetical protein complement(418928..419239) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790112 YP_005198489.1 CDS Rahaq2_0411 NC_016818.1 419295 421256 R PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; acetate--CoA ligase complement(419295..421256) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790113 YP_005198490.1 CDS Rahaq2_0412 NC_016818.1 421763 422341 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 421763..422341 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790114 YP_005198491.1 CDS Rahaq2_0413 NC_016818.1 422443 424944 D PFAM: Fimbrial Usher protein; P pilus assembly protein, porin PapC 422443..424944 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790115 YP_005198492.1 CDS Rahaq2_0414 NC_016818.1 424992 425729 D PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD 424992..425729 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790116 YP_005198493.1 CDS Rahaq2_0415 NC_016818.1 425739 426710 D hypothetical protein 425739..426710 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790117 YP_005198494.1 CDS Rahaq2_0416 NC_016818.1 426738 427010 D PFAM: Helix-turn-helix; putative transcriptional regulator 426738..427010 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790118 YP_005198495.1 CDS Rahaq2_0417 NC_016818.1 427036 427593 R hypothetical protein complement(427036..427593) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790119 YP_005198496.1 CDS Rahaq2_0418 NC_016818.1 427583 428464 R PFAM: Transcriptional regulatory protein, C terminal; DNA-binding protein complement(427583..428464) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790120 YP_005198497.1 CDS Rahaq2_0419 NC_016818.1 428713 429738 R PFAM: LD-carboxypeptidase; putative MccF-like protein (microcin C7 resistance) complement(428713..429738) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790121 YP_005198498.1 CDS Rahaq2_0420 NC_016818.1 429829 431145 R PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter; sugar phosphate permease complement(429829..431145) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790122 YP_005198499.1 CDS Rahaq2_0421 NC_016818.1 431138 432298 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; L-alanine-DL-glutamate epimerase-like protein complement(431138..432298) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793789 YP_005198500.1 CDS Rahaq2_0423 NC_016818.1 432894 433469 R transcriptional regulator complement(432894..433469) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793790 YP_005198501.1 CDS Rahaq2_0424 NC_016818.1 433513 435243 R PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; thiol:disulfide interchange protein complement(433513..435243) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790124 YP_005198502.1 CDS Rahaq2_0425 NC_016818.1 435416 436717 R PFAM: Anaerobic c4-dicarboxylate membrane transporter; TIGRFAM: anaerobic c4-dicarboxylate membrane transporter family protein; anaerobic c4-dicarboxylate membrane transporter family protein complement(435416..436717) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790125 YP_005198503.1 CDS Rahaq2_0426 NC_016818.1 436853 438289 R PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase; aspartate ammonia-lyase complement(436853..438289) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790126 YP_005198504.1 CDS Rahaq2_0427 NC_016818.1 438517 438708 D hypothetical protein 438517..438708 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790127 YP_005198505.1 CDS Rahaq2_0428 NC_016818.1 438662 439153 D PFAM: FxsA cytoplasmic membrane protein; protein affecting phage T7 exclusion by the F plasmid 438662..439153 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790128 YP_005198506.1 CDS Rahaq2_0429 NC_016818.1 439369 439662 D PFAM: Chaperonin 10 Kd subunit; Co-chaperonin GroES 439369..439662 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790129 YP_005198507.1 CDS Rahaq2_0430 NC_016818.1 439716 441362 D PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin GroL 439716..441362 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790130 YP_005198508.1 CDS Rahaq2_0431 NC_016818.1 441659 442003 D hypothetical protein 441659..442003 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790131 YP_005198509.1 CDS Rahaq2_0432 NC_016818.1 442192 443220 R PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein; lysine-2,3-aminomutase-related protein complement(442192..443220) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790132 YP_005198510.1 CDS Rahaq2_0433 NC_016818.1 443259 443825 D PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P 443259..443825 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790133 YP_005198511.1 CDS Rahaq2_0434 NC_016818.1 443921 444049 D PFAM: Entericidin EcnA/B family; manually curated; putative small secreted protein 443921..444049 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790134 YP_005198512.1 CDS Rahaq2_0435 NC_016818.1 444168 444302 D PFAM: Entericidin EcnA/B family; putative small secreted protein 444168..444302 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790135 YP_005198513.1 CDS Rahaq2_0436 NC_016818.1 444392 444916 R PFAM: Lipocalin-like domain; lipocalin complement(444392..444916) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790136 YP_005198514.1 CDS Rahaq2_0437 NC_016818.1 445041 445400 R PFAM: Fumarate reductase subunit D; fumarate reductase subunit D complement(445041..445400) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790137 YP_005198515.1 CDS Rahaq2_0438 NC_016818.1 445410 445820 R PFAM: Fumarate reductase subunit C; fumarate reductase subunit C complement(445410..445820) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790138 YP_005198516.1 CDS Rahaq2_0439 NC_016818.1 445832 446566 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(445832..446566) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790139 YP_005198517.1 CDS Rahaq2_0440 NC_016818.1 446559 448358 R PFAM: domain; FAD binding domain; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; fumarate reductase flavoprotein subunit complement(446559..448358) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793791 YP_005198518.1 CDS Rahaq2_0441 NC_016818.1 448642 449619 D PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase-like protein GenX; lysyl-tRNA synthetase-like protein GenX 448642..449619 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790140 YP_005198519.1 CDS Rahaq2_0442 NC_016818.1 449730 453101 R PFAM: Mechanosensitive ion channel; small-conductance mechanosensitive channel complement(449730..453101) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790141 YP_005198520.1 CDS Rahaq2_0443 NC_016818.1 453148 454092 R PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; phosphatidylserine decarboxylase complement(453148..454092) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793792 YP_005198521.1 CDS Rahaq2_0444 NC_016818.1 454275 455312 R PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A complement(454275..455312) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790142 YP_005198522.1 CDS Rahaq2_0445 NC_016818.1 455439 455984 D PFAM: Exonuclease; oligoribonuclease 455439..455984 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790143 YP_005198523.1 CDS Rahaq2_0449 NC_016818.1 456963 458117 R PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; manually curated; iron-sulfur cluster binding protein complement(456963..458117) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790147 YP_005198524.1 CDS Rahaq2_0450 NC_016818.1 458116 459630 D PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region; yjeF-like protein, hydroxyethylthiazole kinase-related protein 458116..459630 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790148 YP_005198525.1 CDS Rahaq2_0451 NC_016818.1 459641 460108 D PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; YjeE family ATPase 459641..460108 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790149 YP_005198526.1 CDS Rahaq2_0452 NC_016818.1 460116 461882 D PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain; Localisation of periplasmic protein complexes; N-acetylmuramoyl-L-alanine amidase 460116..461882 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790150 YP_005198527.1 CDS Rahaq2_0453 NC_016818.1 461914 463830 D PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 461914..463830 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790151 YP_005198528.1 CDS Rahaq2_0454 NC_016818.1 463823 464764 D PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA isopentenyltransferase MiaA 463823..464764 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790152 YP_005198529.1 CDS Rahaq2_0455 NC_016818.1 464879 465187 D PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA chaperone Hfq 464879..465187 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790153 YP_005198530.1 CDS Rahaq2_0456 NC_016818.1 465286 466590 D PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; GTP-binding protein HflX 465286..466590 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793793 YP_005198531.1 CDS Rahaq2_0457 NC_016818.1 466624 467922 D PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein; HflK protein 466624..467922 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790154 YP_005198532.1 CDS Rahaq2_0458 NC_016818.1 467925 468923 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; HflC protein 467925..468923 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790155 YP_005198533.1 CDS Rahaq2_0459 NC_016818.1 469018 469218 D PFAM: Uncharacterized protein conserved in bacteria (DUF2065); hypothetical protein 469018..469218 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793794 YP_005198534.1 CDS Rahaq2_0460 NC_016818.1 469363 470661 D PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthase 469363..470661 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790156 YP_005198535.1 CDS Rahaq2_0461 NC_016818.1 470889 471314 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; Rrf2 family transcriptional regulator 470889..471314 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790157 YP_005198536.1 CDS Rahaq2_0462 NC_016818.1 471356 473854 D PFAM: RNB domain; Ribonuclease B OB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R 471356..473854 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793795 YP_005198537.1 CDS Rahaq2_0463 NC_016818.1 473875 474690 D PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; rRNA methylase 473875..474690 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793796 YP_005198538.1 CDS Rahaq2_0464 NC_016818.1 474843 476474 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase 474843..476474 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790158 YP_005198539.1 CDS Rahaq2_0465 NC_016818.1 476475 476786 R PFAM: Protein of unknown function (DUF1471); hypothetical protein complement(476475..476786) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790159 YP_005198540.1 CDS Rahaq2_0466 NC_016818.1 476882 478831 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(476882..478831) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793797 YP_005198541.1 CDS Rahaq2_0467 NC_016818.1 479111 479860 D PFAM: Prolyl oligopeptidase family; prolyl oligopeptidase family protein 479111..479860 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790160 YP_005198542.1 CDS Rahaq2_0468 NC_016818.1 480011 480403 D PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 480011..480403 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790161 YP_005198543.1 CDS Rahaq2_0469 NC_016818.1 480409 480726 D PFAM: Single-strand binding protein family; primosomal replication protein N 480409..480726 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790162 YP_005198544.1 CDS Rahaq2_0470 NC_016818.1 480731 480958 D PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 480731..480958 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790163 YP_005198545.1 CDS Rahaq2_0471 NC_016818.1 480998 481450 D PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 480998..481450 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790164 YP_005198546.1 CDS Rahaq2_0472 NC_016818.1 481548 482258 R PFAM: Opacity-associated protein A N-terminal motif; Opacity-associated protein A LysM-like domain; cell envelope opacity-associated protein A complement(481548..482258) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790165 YP_005198547.1 CDS Rahaq2_0473 NC_016818.1 482514 483134 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase 482514..483134 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790166 YP_005198548.1 CDS Rahaq2_0474 NC_016818.1 483200 483865 R PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein; iron-sulfur cluster repair di-iron protein complement(483200..483865) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790167 YP_005198549.1 CDS Rahaq2_0475 NC_016818.1 483990 485939 R PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(483990..485939) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790168 YP_005198550.1 CDS Rahaq2_0476 NC_016818.1 486138 486884 D PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; 3'(2'),5'-bisphosphate nucleotidase 486138..486884 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790169 YP_005198551.1 CDS Rahaq2_0477 NC_016818.1 486921 487478 R PFAM: Bacterial protein of unknown function (YtfJ_HI0045); TIGRFAM: conserved hypothetical protein YtfJ-family, TIGR01626; hypothetical protein complement(486921..487478) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790170 YP_005198552.1 CDS Rahaq2_0478 NC_016818.1 487788 487994 D PFAM: Protein of unknown function (DUF1107); hypothetical protein 487788..487994 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790171 YP_005198553.1 CDS Rahaq2_0479 NC_016818.1 488108 489457 R PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein complement(488108..489457) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793798 YP_005198554.1 CDS Rahaq2_0480 NC_016818.1 489686 490324 R PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-S-sulfoxide reductase complement(489686..490324) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790172 YP_005198555.1 CDS Rahaq2_0481 NC_016818.1 490594 492330 D PFAM: Surface antigen variable number repeat; Surface antigen; outer membrane protein 490594..492330 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790173 YP_005198556.1 CDS Rahaq2_0482 NC_016818.1 492327 496142 D PFAM: Family of unknown function (DUF490); hypothetical protein 492327..496142 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790174 YP_005198557.1 CDS Rahaq2_0483 NC_016818.1 496174 496527 D PFAM: AIG2-like family; hypothetical protein 496174..496527 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790175 YP_005198558.1 CDS Rahaq2_0484 NC_016818.1 496644 497174 R PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase complement(496644..497174) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793799 YP_005198559.1 CDS Rahaq2_0485 NC_016818.1 497302 497448 R hypothetical protein complement(497302..497448) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790176 YP_005198560.1 CDS Rahaq2_0486 NC_016818.1 497491 499062 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 497491..499062 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790177 YP_005198561.1 CDS Rahaq2_0487 NC_016818.1 499190 500194 R PFAM: Fructose-1-6-bisphosphatase; fructose-1,6-bisphosphatase complement(499190..500194) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790178 YP_005198562.1 CDS Rahaq2_0488 NC_016818.1 500362 501747 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 500362..501747 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790179 YP_005198563.1 CDS Rahaq2_0489 NC_016818.1 502067 502330 R PFAM: Protein of unknown function (DUF1471); hypothetical protein complement(502067..502330) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790180 YP_005198564.1 CDS Rahaq2_0490 NC_016818.1 502534 502797 R PFAM: Protein of unknown function (DUF1471); hypothetical protein complement(502534..502797) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790181 YP_005198565.1 CDS Rahaq2_0491 NC_016818.1 503249 503719 R PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor; arginine repressor complement(503249..503719) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790182 YP_005198566.1 CDS Rahaq2_0492 NC_016818.1 504184 505122 D PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; malate dehydrogenase 504184..505122 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790183 YP_005198567.1 CDS Rahaq2_0493 NC_016818.1 505168 505440 R putative transcriptional regulator complement(505168..505440) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790184 YP_005198568.1 CDS Rahaq2_0494 NC_016818.1 506101 506460 D PFAM: Mu DNA-binding domain; Mu DNA-binding domain-containing protein 506101..506460 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790185 YP_005198569.1 CDS Rahaq2_0495 NC_016818.1 506513 507484 R PFAM: Polyprenyl synthetase; geranylgeranyl pyrophosphate synthase complement(506513..507484) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790186 YP_005198570.1 CDS Rahaq2_0496 NC_016818.1 507744 508055 D PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 507744..508055 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790187 YP_005198571.1 CDS Rahaq2_0497 NC_016818.1 508074 508331 D PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 508074..508331 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790188 YP_005198572.1 CDS Rahaq2_0498 NC_016818.1 508417 509367 D PFAM: EamA-like transporter family; hypothetical protein 508417..509367 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790189 YP_005198573.1 CDS Rahaq2_0499 NC_016818.1 509408 510580 D PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain; Obg family GTPase CgtA 509408..510580 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793800 YP_005198574.1 CDS Rahaq2_0500 NC_016818.1 510652 511743 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(510652..511743) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790190 YP_005198575.1 CDS Rahaq2_0501 NC_016818.1 511740 512402 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(511740..512402) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790191 YP_005198576.1 CDS Rahaq2_0502 NC_016818.1 512423 513856 R PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; D-alanyl-D-alanine carboxypeptidase complement(512423..513856) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790192 YP_005198577.1 CDS Rahaq2_0503 NC_016818.1 514141 514617 D PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA 514141..514617 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790193 YP_005198578.1 CDS Rahaq2_0504 NC_016818.1 514798 515094 R PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family; putative RNA-binding protein complement(514798..515094) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790194 YP_005198579.1 CDS Rahaq2_0505 NC_016818.1 515277 515906 D PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; cell division protein FtsJ 515277..515906 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793801 YP_005198580.1 CDS Rahaq2_0506 NC_016818.1 515954 517906 D PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; ATP-dependent metalloprotease FtsH 515954..517906 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790195 YP_005198581.1 CDS Rahaq2_0507 NC_016818.1 518032 518871 D PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; dihydropteroate synthase 518032..518871 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790196 YP_005198582.1 CDS Rahaq2_0508 NC_016818.1 518874 520214 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase 518874..520214 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790197 YP_005198583.1 CDS Rahaq2_0509 NC_016818.1 520450 520785 D PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; protein translocase subunit SecG 520450..520785 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790198 YP_005198584.1 CDS Rahaq2_0512 NC_016818.1 521316 521774 D PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein 521316..521774 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790201 YP_005198585.1 CDS Rahaq2_0513 NC_016818.1 521798 523306 D PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication; transcription termination factor NusA 521798..523306 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790202 YP_005198586.1 CDS Rahaq2_0514 NC_016818.1 523331 526024 D PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor IF-2 523331..526024 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790203 YP_005198587.1 CDS Rahaq2_0515 NC_016818.1 526103 526516 D PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A 526103..526516 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790204 YP_005198588.1 CDS Rahaq2_0516 NC_016818.1 526516 527460 D PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine 55 synthase 526516..527460 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790205 YP_005198589.1 CDS Rahaq2_0518 NC_016818.1 527583 527852 D PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; manually curated; 30S ribosomal protein S15 527583..527852 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790206 YP_005198590.1 CDS Rahaq2_0520 NC_016818.1 528126 530249 D PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 528126..530249 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793802 YP_005198591.1 CDS Rahaq2_0521 NC_016818.1 530379 531263 D PFAM: Tetratricopeptide repeat; lipoprotein NlpI, contains TPR repeats 530379..531263 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790208 YP_005198592.1 CDS Rahaq2_0522 NC_016818.1 531448 533373 D PFAM: Helicase conserved C-terminal domain; Cold shock protein DEAD box A; DbpA RNA binding domain; DEAD/DEAH box helicase; DNA/RNA helicase 531448..533373 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790209 YP_005198593.1 CDS Rahaq2_0523 NC_016818.1 533456 534481 R PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; luciferase family oxidoreductase complement(533456..534481) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790210 YP_005198594.1 CDS Rahaq2_0524 NC_016818.1 534726 535700 D PFAM: HlyD family secretion protein; multidrug resistance efflux pump 534726..535700 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790211 YP_005198595.1 CDS Rahaq2_0525 NC_016818.1 535697 536869 D PFAM: ABC-2 type transporter; multidrug ABC transporter permease 535697..536869 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793803 YP_005198596.1 CDS Rahaq2_0526 NC_016818.1 536866 538029 D PFAM: ABC-2 type transporter; multidrug ABC transporter permease 536866..538029 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790212 YP_005198597.1 CDS Rahaq2_0527 NC_016818.1 538088 538966 R PFAM: Peptidase family U32; collagenase-like protease complement(538088..538966) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790213 YP_005198598.1 CDS Rahaq2_0528 NC_016818.1 538981 539976 R PFAM: Peptidase family U32; collagenase-like protease complement(538981..539976) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790214 YP_005198599.1 CDS Rahaq2_0529 NC_016818.1 540293 540814 D PFAM: SCP-2 sterol transfer family; putative lipid carrier protein 540293..540814 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793804 YP_005198600.1 CDS Rahaq2_0530 NC_016818.1 540808 541311 D PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase 540808..541311 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790215 YP_005198601.1 CDS Rahaq2_0531 NC_016818.1 541352 541654 R PFAM: GIY-YIG catalytic domain; putative endonuclease containing a URI domain complement(541352..541654) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790216 YP_005198602.1 CDS Rahaq2_0532 NC_016818.1 541776 542216 D hypothetical protein 541776..542216 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790217 YP_005198603.1 CDS Rahaq2_0533 NC_016818.1 542245 542763 R PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; Pfpi family intracellular protease complement(542245..542763) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790218 YP_005198604.1 CDS Rahaq2_0534 NC_016818.1 542949 543590 D PFAM: Semialdehyde dehydrogenase, NAD binding domain; putative nucleoside-diphosphate sugar epimerase 542949..543590 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790219 YP_005198605.1 CDS Rahaq2_0535 NC_016818.1 543689 544327 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; phosphonate metabolism protein complement(543689..544327) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790220 YP_005198606.1 CDS Rahaq2_0536 NC_016818.1 544336 544911 R PFAM: Guanylate kinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; phosphonate metabolism protein, PRPP-forming 1,5-bisphosphokinase PhnN complement(544336..544911) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790221 YP_005198607.1 CDS Rahaq2_0537 NC_016818.1 544936 546072 R PFAM: Amidohydrolase family; TIGRFAM: phosphonate metabolism protein PhnM; phosphonate metabolism protein PhnM complement(544936..546072) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790222 YP_005198608.1 CDS Rahaq2_0538 NC_016818.1 546069 546776 R PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL; phosphonate C-P lyase system protein PhnL complement(546069..546776) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790223 YP_005198609.1 CDS Rahaq2_0539 NC_016818.1 546805 547596 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; phosphonate C-P lyase system protein PhnK complement(546805..547596) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790224 YP_005198610.1 CDS Rahaq2_0540 NC_016818.1 547596 548471 R PFAM: Phosphonate metabolism protein PhnJ; putative enzyme of phosphonate metabolism complement(547596..548471) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793805 YP_005198611.1 CDS Rahaq2_0541 NC_016818.1 548461 549543 R PFAM: Bacterial phosphonate metabolism protein (PhnI); putative enzyme of phosphonate metabolism complement(548461..549543) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790225 YP_005198612.1 CDS Rahaq2_0542 NC_016818.1 549543 550124 R PFAM: Bacterial phosphonate metabolism protein (PhnH); TIGRFAM: phosphonate C-P lyase system protein PhnH; phosphonate C-P lyase system protein PhnH complement(549543..550124) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790226 YP_005198613.1 CDS Rahaq2_0543 NC_016818.1 550128 550571 R PFAM: Phosphonate metabolism protein PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; phosphonate C-P lyase system protein PhnG complement(550128..550571) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790227 YP_005198614.1 CDS Rahaq2_0544 NC_016818.1 550572 551297 R PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; phosphonates metabolism transcriptional regulator PhnF complement(550572..551297) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790228 YP_005198615.1 CDS Rahaq2_0545 NC_016818.1 551969 552535 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 551969..552535 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790229 YP_005198616.1 CDS Rahaq2_0546 NC_016818.1 552592 553314 D PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD 552592..553314 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790230 YP_005198617.1 CDS Rahaq2_0547 NC_016818.1 553359 555956 D PFAM: Fimbrial Usher protein; P pilus assembly protein, porin PapC 553359..555956 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790231 YP_005198618.1 CDS Rahaq2_0548 NC_016818.1 555996 556964 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 555996..556964 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793806 YP_005198619.1 CDS Rahaq2_0549 NC_016818.1 556998 558728 D PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; hemolysin activation/secretion protein 556998..558728 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790232 YP_005198620.1 CDS Rahaq2_0550 NC_016818.1 558771 568040 D PFAM: Haemagluttinin repeat; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; adhesin HecA family 20-residue repeat (two copies); filamentous hemagglutinin family N-terminal domain protein 558771..568040 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790233 YP_005198621.1 CDS Rahaq2_0551 NC_016818.1 568232 568696 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; manually curated; anaerobic ribonucleoside-triphosphate reductase activating protein complement(568232..568696) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793807 YP_005198622.1 CDS Rahaq2_0552 NC_016818.1 568701 570884 R PFAM: Glycine radical; ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; anaerobic ribonucleoside-triphosphate reductase complement(568701..570884) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790234 YP_005198623.1 CDS Rahaq2_0553 NC_016818.1 571183 572826 R PFAM: Alpha amylase, catalytic domain; TIGRFAM: alpha,alpha-phosphotrehalase; alpha,alpha-phosphotrehalase complement(571183..572826) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790235 YP_005198624.1 CDS Rahaq2_0554 NC_016818.1 572849 574267 R PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, trehalose-specific IIBC component; PTS system, glucose-like IIB component; PTS system trehalose-specific transporter subunit IIBC complement(572849..574267) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790236 YP_005198625.1 CDS Rahaq2_0555 NC_016818.1 574393 575349 R PFAM: Bacterial regulatory proteins, lacI family; family; TIGRFAM: trehalose operon repressor, proteobacterial; trehalose operon repressor complement(574393..575349) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793808 YP_005198626.1 CDS Rahaq2_0556 NC_016818.1 575696 578395 D PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase 575696..578395 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790237 YP_005198627.1 CDS Rahaq2_0557 NC_016818.1 578638 579289 D manually curated; hypothetical protein join(578638..578919,578918..579289) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790238 YP_005198628.1 CDS Rahaq2_0558 NC_016818.1 579282 579536 D hypothetical protein 579282..579536 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790239 YP_005198629.1 CDS Rahaq2_0560 NC_016818.1 579926 580384 D PFAM: Transposase IS200 like; manually curated; transposase 579926..580384 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790241 YP_005198630.1 CDS Rahaq2_0562 NC_016818.1 580815 582026 R PFAM: Sodium:dicarboxylate symporter family; Na+/serine symporter complement(580815..582026) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790243 YP_005198631.1 CDS Rahaq2_0563 NC_016818.1 582162 583130 R PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family; TerC family integral membrane protein complement(582162..583130) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790244 YP_005198632.1 CDS Rahaq2_0565 NC_016818.1 583541 584287 R PFAM: Glutamine amidotransferase class-I; GMP synthase complement(583541..584287) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790245 YP_005198633.1 CDS Rahaq2_0566 NC_016818.1 584314 585300 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase complement(584314..585300) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790246 YP_005198634.1 CDS Rahaq2_0567 NC_016818.1 585333 585839 R PFAM: Protein of unknown function DUF45; putative metal-dependent hydrolase complement(585333..585839) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790247 YP_005198635.1 CDS Rahaq2_0568 NC_016818.1 586010 587161 D PFAM: Methyltransferase small domain; 16S RNA G1207 methylase RsmC 586010..587161 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790248 YP_005198636.1 CDS Rahaq2_0569 NC_016818.1 587250 587789 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; type VI secretion lipoprotein complement(587250..587789) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790249 YP_005198637.1 CDS Rahaq2_0570 NC_016818.1 587776 588858 R PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family; type VI secretion protein complement(587776..588858) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790250 YP_005198638.1 CDS Rahaq2_0571 NC_016818.1 588822 590585 R PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family; type VI secretion protein complement(588822..590585) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793809 YP_005198639.1 CDS Rahaq2_0572 NC_016818.1 590594 593929 R PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; hypothetical protein complement(590594..593929) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793810 YP_005198640.1 CDS Rahaq2_0573 NC_016818.1 593926 595071 R hypothetical protein complement(593926..595071) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790251 YP_005198641.1 CDS Rahaq2_0574 NC_016818.1 595077 595346 R hypothetical protein complement(595077..595346) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790252 YP_005198642.1 CDS Rahaq2_0575 NC_016818.1 595449 596555 R hypothetical protein complement(595449..596555) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790253 YP_005198643.1 CDS Rahaq2_0576 NC_016818.1 596601 597710 R hypothetical protein complement(596601..597710) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790254 YP_005198644.1 CDS Rahaq2_0577 NC_016818.1 597723 600488 R hypothetical protein complement(597723..600488) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790255 YP_005198645.1 CDS Rahaq2_0578 NC_016818.1 600485 601516 R hypothetical protein complement(600485..601516) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790256 YP_005198646.1 CDS Rahaq2_0579 NC_016818.1 601529 603901 R PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; Rhs element Vgr protein complement(601529..603901) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790257 YP_005198647.1 CDS Rahaq2_0580 NC_016818.1 604059 604691 R PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family; DotU family type IV / VI secretion system protein complement(604059..604691) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790258 YP_005198648.1 CDS Rahaq2_0581 NC_016818.1 605251 607287 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase complement(605251..607287) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790259 YP_005198649.1 CDS Rahaq2_0582 NC_016818.1 607683 608549 D PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/carnithine racemase 607683..608549 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790260 YP_005198650.1 CDS Rahaq2_0583 NC_016818.1 608579 610597 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein complement(608579..610597) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790261 YP_005198651.1 CDS Rahaq2_0584 NC_016818.1 610880 613177 R PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase complement(610880..613177) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790262 YP_005198652.1 CDS Rahaq2_0585 NC_016818.1 613559 613843 R hypothetical protein complement(613559..613843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790263 YP_005198653.1 CDS Rahaq2_0586 NC_016818.1 614096 616822 R PFAM: Bacterial regulatory proteins, luxR family; ATP-dependent transcriptional regulator complement(614096..616822) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790264 YP_005198654.1 CDS Rahaq2_0587 NC_016818.1 617145 619547 D PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen/starch/alpha-glucan phosphorylase 617145..619547 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790265 YP_005198655.1 CDS Rahaq2_0588 NC_016818.1 619557 621647 D PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 619557..621647 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790266 YP_005198656.1 CDS Rahaq2_0589 NC_016818.1 621848 622189 D PFAM: Helix-turn-helix; Helix-turn-helix protein 621848..622189 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790267 YP_005198657.1 CDS Rahaq2_0590 NC_016818.1 622179 623522 D PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; HipA-like protein 622179..623522 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790268 YP_005198658.1 CDS Rahaq2_0591 NC_016818.1 623644 624534 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type maltose transport systems, permease component complement(623644..624534) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790269 YP_005198659.1 CDS Rahaq2_0592 NC_016818.1 624548 626092 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(624548..626092) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790270 YP_005198660.1 CDS Rahaq2_0593 NC_016818.1 626164 627363 R PFAM: Bacterial extracellular solute-binding protein; maltose-binding periplasmic protein complement(626164..627363) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793811 YP_005198661.1 CDS Rahaq2_0594 NC_016818.1 627730 628839 D PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATPase 627730..628839 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790271 YP_005198662.1 CDS Rahaq2_0595 NC_016818.1 628869 630164 D PFAM: LamB porin; maltoporin (phage lambda and maltose receptor) 628869..630164 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790272 YP_005198663.1 CDS Rahaq2_0596 NC_016818.1 630395 631291 D PFAM: Maltose operon periplasmic protein precursor (MalM); Maltose operon periplasmic protein precursor (MalM) 630395..631291 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790273 YP_005198664.1 CDS Rahaq2_0597 NC_016818.1 631529 631786 R putative transcriptional regulator complement(631529..631786) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790274 YP_005198665.1 CDS Rahaq2_0598 NC_016818.1 632151 632294 R hypothetical protein complement(632151..632294) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790275 YP_005198666.1 CDS Rahaq2_0599 NC_016818.1 632351 633190 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; DNA-binding domain-containing protein 632351..633190 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790276 YP_005198667.1 CDS Rahaq2_0600 NC_016818.1 633242 633679 D PFAM: Protein of unknown function (DUF2000); hypothetical protein 633242..633679 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790277 YP_005198668.1 CDS Rahaq2_0601 NC_016818.1 633750 634448 D PFAM: PAP2 superfamily; membrane-associated phospholipid phosphatase 633750..634448 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790278 YP_005198669.1 CDS Rahaq2_0602 NC_016818.1 634512 634997 D PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; O-6-methylguanine DNA methyltransferase 634512..634997 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790279 YP_005198670.1 CDS Rahaq2_0603 NC_016818.1 635111 636454 D PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase/leucine dehydrogenase 635111..636454 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790280 YP_005198671.1 CDS Rahaq2_0604 NC_016818.1 636566 638500 R PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase complement(636566..638500) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790281 YP_005198672.1 CDS Rahaq2_0605 NC_016818.1 638500 639504 R PFAM: Glycosyl transferase family 4; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase complement(638500..639504) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790282 YP_005198673.1 CDS Rahaq2_0606 NC_016818.1 639514 640464 R PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase complement(639514..640464) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790283 YP_005198674.1 CDS Rahaq2_0607 NC_016818.1 640461 641585 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(640461..641585) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790284 YP_005198675.1 CDS Rahaq2_0608 NC_016818.1 641761 642645 R PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase complement(641761..642645) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790285 YP_005198676.1 CDS Rahaq2_0609 NC_016818.1 642647 643684 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(642647..643684) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790286 YP_005198677.1 CDS Rahaq2_0610 NC_016818.1 643681 644802 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(643681..644802) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790287 YP_005198678.1 CDS Rahaq2_0611 NC_016818.1 644799 645920 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(644799..645920) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793812 YP_005198679.1 CDS Rahaq2_0612 NC_016818.1 645917 647119 R hypothetical protein complement(645917..647119) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793813 YP_005198680.1 CDS Rahaq2_0613 NC_016818.1 647166 648896 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(647166..648896) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790288 YP_005198681.1 CDS Rahaq2_0614 NC_016818.1 648910 649908 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(648910..649908) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790289 YP_005198682.1 CDS Rahaq2_0615 NC_016818.1 649935 651047 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(649935..651047) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793814 YP_005198683.1 CDS Rahaq2_0616 NC_016818.1 651065 652021 R hypothetical protein complement(651065..652021) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793815 YP_005198684.1 CDS Rahaq2_0617 NC_016818.1 652021 652674 R PFAM: Phosphoglycerate mutase family; fructose-2,6-bisphosphatase complement(652021..652674) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790290 YP_005198685.1 CDS Rahaq2_0618 NC_016818.1 652622 653806 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(652622..653806) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790291 YP_005198686.1 CDS Rahaq2_0619 NC_016818.1 653803 655011 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(653803..655011) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790292 YP_005198687.1 CDS Rahaq2_0620 NC_016818.1 655004 656131 R PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(655004..656131) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790293 YP_005198688.1 CDS Rahaq2_0621 NC_016818.1 656128 657690 R hypothetical protein complement(656128..657690) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793816 YP_005198689.1 CDS Rahaq2_0622 NC_016818.1 657687 659120 R coenzyme F390 synthetase complement(657687..659120) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790294 YP_005198690.1 CDS Rahaq2_0623 NC_016818.1 659068 659820 R PFAM: ABC transporter; polysaccharide/polyol phosphate ABC transporter ATPase complement(659068..659820) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790295 YP_005198691.1 CDS Rahaq2_0624 NC_016818.1 659825 660673 R PFAM: ABC-2 type transporter; ABC-type polysaccharide/polyol phosphate export systems permease complement(659825..660673) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790296 YP_005198692.1 CDS Rahaq2_0625 NC_016818.1 660888 662252 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase complement(660888..662252) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790297 YP_005198693.1 CDS Rahaq2_0626 NC_016818.1 662266 663678 R PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(662266..663678) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790298 YP_005198694.1 CDS Rahaq2_0627 NC_016818.1 664883 665266 R hypothetical protein complement(664883..665266) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790299 YP_005198695.1 CDS Rahaq2_0628 NC_016818.1 665498 666157 R hypothetical protein complement(665498..666157) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790300 YP_005198696.1 CDS Rahaq2_0629 NC_016818.1 666381 667010 R hypothetical protein complement(666381..667010) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790301 YP_005198697.1 CDS Rahaq2_0630 NC_016818.1 667543 667689 D hypothetical protein 667543..667689 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790302 YP_005198698.1 CDS Rahaq2_0632 NC_016818.1 668170 668667 D PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug); G:T/U mismatch-specific DNA glycosylase 668170..668667 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790304 YP_005198699.1 CDS Rahaq2_0633 NC_016818.1 668749 670587 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; sigma-70 family RNA polymerase sigma factor complement(668749..670587) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790305 YP_005198700.1 CDS Rahaq2_0634 NC_016818.1 670891 672639 R PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase, catalytic core complement(670891..672639) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790306 YP_005198701.1 CDS Rahaq2_0635 NC_016818.1 672775 672990 R PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 complement(672775..672990) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790307 YP_005198702.1 CDS Rahaq2_0636 NC_016818.1 673307 674320 D PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; putative glycoprotease GCP 673307..674320 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790308 YP_005198703.1 CDS Rahaq2_0637 NC_016818.1 674516 675145 R PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; acyl-phosphate glycerol 3-phosphate acyltransferase complement(674516..675145) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790309 YP_005198704.1 CDS Rahaq2_0638 NC_016818.1 675253 675609 D PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; dihydroneopterin aldolase 675253..675609 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790310 YP_005198705.1 CDS Rahaq2_0639 NC_016818.1 675793 676620 D PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase UppP 675793..676620 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790311 YP_005198706.1 CDS Rahaq2_0640 NC_016818.1 676697 677932 R PFAM: HD domain; Poly A polymerase head domain; tRNA nucleotidyltransferase/poly(A) polymerase complement(676697..677932) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790312 YP_005198707.1 CDS Rahaq2_0641 NC_016818.1 678064 678684 R SH3 domain-containing protein complement(678064..678684) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790313 YP_005198708.1 CDS Rahaq2_0642 NC_016818.1 678901 680271 D PFAM: CYTH domain; hypothetical protein 678901..680271 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790314 YP_005198709.1 CDS Rahaq2_0643 NC_016818.1 680329 683166 D PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; glutamine synthetase 680329..683166 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790315 YP_005198710.1 CDS Rahaq2_0644 NC_016818.1 683254 684681 D PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain; D-heptose-7- phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase 683254..684681 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790316 YP_005198711.1 CDS Rahaq2_0645 NC_016818.1 684784 686034 D PFAM: Amino acid permease; amino acid transporter 684784..686034 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790317 YP_005198712.1 CDS Rahaq2_0646 NC_016818.1 686100 686372 R PFAM: Protein of unknown function (DUF526); hypothetical protein complement(686100..686372) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793817 YP_005198713.1 CDS Rahaq2_0647 NC_016818.1 686814 687467 D PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 686814..687467 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790318 YP_005198714.1 CDS Rahaq2_0648 NC_016818.1 687716 688504 D PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; hypothetical protein 687716..688504 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790319 YP_005198715.1 CDS Rahaq2_0649 NC_016818.1 688556 689716 R PFAM: Glutathionylspermidine synthase; glutathionylspermidine synthase complement(688556..689716) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793818 YP_005198716.1 CDS Rahaq2_0650 NC_016818.1 689726 690397 R PFAM: Protein of unknown function (DUF1190); hypothetical protein complement(689726..690397) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790320 YP_005198717.1 CDS Rahaq2_0651 NC_016818.1 690583 692076 R PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein complement(690583..692076) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790321 YP_005198718.1 CDS Rahaq2_0652 NC_016818.1 692307 692939 D PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; protein containing C-terminal region of TrgB protein 692307..692939 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793819 YP_005198719.1 CDS Rahaq2_0653 NC_016818.1 692939 693364 D PFAM: Protein of unknown function (DUF1249); hypothetical protein 692939..693364 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790322 YP_005198720.1 CDS Rahaq2_0654 NC_016818.1 693392 694222 D PFAM: Calcineurin-like phosphoesterase C-terminal; Calcineurin-like phosphoesterase; putative phosphohydrolase 693392..694222 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790323 YP_005198721.1 CDS Rahaq2_0655 NC_016818.1 694219 694800 D PFAM: Uncharacterised protein family (UPF0227); putative esterase 694219..694800 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790324 YP_005198722.1 CDS Rahaq2_0656 NC_016818.1 694917 696812 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial; DNA topoisomerase IV subunit B 694917..696812 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790325 YP_005198723.1 CDS Rahaq2_0657 NC_016818.1 696895 697200 R PFAM: Antibiotic biosynthesis monooxygenase; hypothetical protein complement(696895..697200) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790326 YP_005198724.1 CDS Rahaq2_0658 NC_016818.1 697231 697818 R PFAM: Flavodoxin-like fold; putative NADPH-quinone reductase (modulator of drug activity B) complement(697231..697818) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790327 YP_005198725.1 CDS Rahaq2_0659 NC_016818.1 698150 700423 D PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial; DNA topoisomerase IV subunit A 698150..700423 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790328 YP_005198726.1 CDS Rahaq2_0660 NC_016818.1 700640 701377 D PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 700640..701377 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790329 YP_005198727.1 CDS Rahaq2_0661 NC_016818.1 701462 702877 D PFAM: Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; putative multicopper oxidase 701462..702877 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790330 YP_005198728.1 CDS Rahaq2_0662 NC_016818.1 702944 703768 R PFAM: Aldo/keto reductase family; aldo/keto reductase, diketogulonate reductase complement(702944..703768) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790331 YP_005198729.1 CDS Rahaq2_0663 NC_016818.1 703896 704933 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent alcohol dehydrogenase complement(703896..704933) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790332 YP_005198730.1 CDS Rahaq2_0664 NC_016818.1 705239 706174 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus; DNA-binding domain-containing protein 705239..706174 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790333 YP_005198731.1 CDS Rahaq2_0665 NC_016818.1 706184 706843 R PFAM: SNARE associated Golgi protein; putative membrane-associated protein complement(706184..706843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790334 YP_005198732.1 CDS Rahaq2_0666 NC_016818.1 707057 708250 R PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: cystathionine beta-lyase, bacterial; cystathionine beta-lyase complement(707057..708250) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793820 YP_005198733.1 CDS Rahaq2_0667 NC_016818.1 708428 709720 R PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP transporter subunit DctM complement(708428..709720) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790335 YP_005198734.1 CDS Rahaq2_0668 NC_016818.1 709733 710245 R PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; TRAP-type C4-dicarboxylate transport system, small permease component complement(709733..710245) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790336 YP_005198735.1 CDS Rahaq2_0669 NC_016818.1 710302 711279 R PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; TRAP dicarboxylate family transporter subunit DctP complement(710302..711279) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793821 YP_005198736.1 CDS Rahaq2_0670 NC_016818.1 711781 712719 D PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB; tonB-system energizer ExbB 711781..712719 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790337 YP_005198737.1 CDS Rahaq2_0671 NC_016818.1 712729 713163 D PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 1; TolR protein; TonB system transport protein ExbD, group 1 712729..713163 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790338 YP_005198738.1 CDS Rahaq2_0672 NC_016818.1 713236 714807 R PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase; galactarate dehydratase complement(713236..714807) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793822 YP_005198739.1 CDS Rahaq2_0673 NC_016818.1 715359 716705 D PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter; D-galactonate transporter 715359..716705 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790339 YP_005198740.1 CDS Rahaq2_0674 NC_016818.1 716763 717533 D PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; 2-dehydro-3-deoxyglucarate aldolase 716763..717533 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790340 YP_005198741.1 CDS Rahaq2_0675 NC_016818.1 717571 718455 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase 717571..718455 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790341 YP_005198742.1 CDS Rahaq2_0676 NC_016818.1 718572 719711 D PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; glycerate kinase 718572..719711 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790342 YP_005198743.1 CDS Rahaq2_0677 NC_016818.1 719829 721136 D PFAM: Alanine racemase, N-terminal domain; putative amino acid aldolase or racemase 719829..721136 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790343 YP_005198744.1 CDS Rahaq2_0678 NC_016818.1 721164 723914 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Uncharacterized signal transduction histidine kinase domain (DUF2222); Hpt domain; signal transduction histidine kinase complement(721164..723914) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790344 YP_005198745.1 CDS Rahaq2_0679 NC_016818.1 723978 725348 D PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; 23S rRNA (uracil-5-)-methyltransferase RumA 723978..725348 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790345 YP_005198746.1 CDS Rahaq2_0680 NC_016818.1 725358 727595 D PFAM: ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; RelA/SpoT family (p)ppGpp synthetase 725358..727595 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790346 YP_005198747.1 CDS Rahaq2_0681 NC_016818.1 727672 728475 D PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; MazG family protein 727672..728475 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790347 YP_005198748.1 CDS Rahaq2_0682 NC_016818.1 728825 730462 D PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 728825..730462 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790348 YP_005198749.1 CDS Rahaq2_0683 NC_016818.1 730539 731843 D PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; phosphopyruvate hydratase 730539..731843 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790349 YP_005198750.1 CDS Rahaq2_0684 NC_016818.1 732011 732682 D PFAM: Radical SAM superfamily; organic radical activating enzyme 732011..732682 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790350 YP_005198751.1 CDS Rahaq2_0685 NC_016818.1 732812 733171 R PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD complement(732812..733171) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790351 YP_005198752.1 CDS Rahaq2_0686 NC_016818.1 733341 734345 D hypothetical protein 733341..734345 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793823 YP_005198753.1 CDS Rahaq2_0687 NC_016818.1 734692 736494 D PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; sulfite reductase (NADPH) flavoprotein, alpha-component 734692..736494 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790352 YP_005198754.1 CDS Rahaq2_0688 NC_016818.1 736522 738258 D PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; sulfite reductase (NADPH) hemoprotein subunit beta 736522..738258 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790353 YP_005198755.1 CDS Rahaq2_0689 NC_016818.1 738283 739020 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosphoadenosine phosphosulfate reductase, thioredoxin dependent; phosophoadenylyl-sulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase, thioredoxin dependent 738283..739020 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793824 YP_005198756.1 CDS Rahaq2_0690 NC_016818.1 739179 740216 R PFAM: Peptidase family M28; putative aminopeptidase complement(739179..740216) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790354 YP_005198757.1 CDS Rahaq2_0691 NC_016818.1 740468 741892 D PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; uroporphyrin-III C-methyltransferase 740468..741892 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790355 YP_005198758.1 CDS Rahaq2_0692 NC_016818.1 741903 742811 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; sulfate adenylyltransferase, small subunit 741903..742811 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793825 YP_005198759.1 CDS Rahaq2_0693 NC_016818.1 742825 744252 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase, large subunit 742825..744252 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790356 YP_005198760.1 CDS Rahaq2_0694 NC_016818.1 744254 744877 D PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); adenylylsulfate kinase ApsK 744254..744877 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790357 YP_005198761.1 CDS Rahaq2_0695 NC_016818.1 744937 745317 D PFAM: Protein of unknown function (DUF3561); hypothetical protein 744937..745317 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790358 YP_005198762.1 CDS Rahaq2_0696 NC_016818.1 745485 745805 D PFAM: Septum formation initiator; septum formation initiator 745485..745805 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790359 YP_005198763.1 CDS Rahaq2_0697 NC_016818.1 745808 746527 D PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 745808..746527 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790360 YP_005198764.1 CDS Rahaq2_0698 NC_016818.1 746527 747000 D PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 746527..747000 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790361 YP_005198765.1 CDS Rahaq2_0699 NC_016818.1 747020 748069 D PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family; tRNA pseudouridine synthase, TruD family 747020..748069 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790362 YP_005198766.1 CDS Rahaq2_0700 NC_016818.1 748050 748814 D PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'/3'-nucleotidase SurE 748050..748814 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790363 YP_005198767.1 CDS Rahaq2_0701 NC_016818.1 748804 749430 D PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate and D-aspartate O-methyltransferase 748804..749430 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790364 YP_005198768.1 CDS Rahaq2_0702 NC_016818.1 749673 750692 D PFAM: Peptidase family M23; LysM domain; metalloendopeptidase-like membrane protein 749673..750692 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790365 YP_005198769.1 CDS Rahaq2_0703 NC_016818.1 750744 751730 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoS 750744..751730 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790366 YP_005198770.1 CDS Rahaq2_0704 NC_016818.1 751829 754384 R PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS complement(751829..754384) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790367 YP_005198771.1 CDS Rahaq2_0705 NC_016818.1 754915 755529 D hypothetical protein 754915..755529 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790368 YP_005198772.1 CDS Rahaq2_0706 NC_016818.1 755587 756315 D PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD 755587..756315 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790369 YP_005198773.1 CDS Rahaq2_0707 NC_016818.1 756376 758967 D PFAM: Fimbrial Usher protein; P pilus assembly protein, porin PapC 756376..758967 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790370 YP_005198774.1 CDS Rahaq2_0708 NC_016818.1 758958 759530 D hypothetical protein 758958..759530 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790371 YP_005198775.1 CDS Rahaq2_0709 NC_016818.1 759541 760119 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 759541..760119 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793826 YP_005198776.1 CDS Rahaq2_0710 NC_016818.1 760145 760756 D hypothetical protein 760145..760756 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790372 YP_005198777.1 CDS Rahaq2_0711 NC_016818.1 760772 761491 D hypothetical protein 760772..761491 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790373 YP_005198778.1 CDS Rahaq2_0712 NC_016818.1 761591 762748 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 761591..762748 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793827 YP_005198779.1 CDS Rahaq2_0713 NC_016818.1 763048 765708 D hypothetical protein 763048..765708 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790374 YP_005198780.1 CDS Rahaq2_0714 NC_016818.1 765862 766965 D TIGRFAM: lytic murein transglycosylase B; lytic murein transglycosylase B 765862..766965 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790375 YP_005198781.1 CDS Rahaq2_0715 NC_016818.1 767126 767620 D PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; competence/damage-inducible protein CinA-like protein 767126..767620 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790376 YP_005198782.1 CDS Rahaq2_0716 NC_016818.1 767728 768792 D PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; protein RecA 767728..768792 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790377 YP_005198783.1 CDS Rahaq2_0717 NC_016818.1 768916 769605 D PFAM: RecX family; hypothetical protein 768916..769605 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790378 YP_005198784.1 CDS Rahaq2_0718 NC_016818.1 769744 772371 D PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanine--tRNA ligase 769744..772371 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790379 YP_005198785.1 CDS Rahaq2_0719 NC_016818.1 772628 772813 D PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA 772628..772813 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790380 YP_005198786.1 CDS Rahaq2_0726 NC_016818.1 774080 774646 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily protein 774080..774646 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790386 YP_005198787.1 CDS Rahaq2_0727 NC_016818.1 774643 775071 D PFAM: SNARE associated Golgi protein; hypothetical protein 774643..775071 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790387 YP_005198788.1 CDS Rahaq2_0728 NC_016818.1 775157 776728 D PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase; glutamate--cysteine ligase 775157..776728 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793829 YP_005198789.1 CDS Rahaq2_0730 NC_016818.1 776886 777401 D PFAM: S-Ribosylhomocysteinase (LuxS); LuxS protein involved in autoinducer AI2 synthesis 776886..777401 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790389 YP_005198790.1 CDS Rahaq2_0731 NC_016818.1 777471 778760 R PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; putative Mg2+ and Co2+ transporter CorB complement(777471..778760) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793830 YP_005198791.1 CDS Rahaq2_0732 NC_016818.1 778777 779568 R PFAM: Cytochrome C assembly protein; ABC transporter permease complement(778777..779568) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790390 YP_005198792.1 CDS Rahaq2_0733 NC_016818.1 779733 781094 D PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; signal recognition particle protein 779733..781094 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790391 YP_005198793.1 CDS Rahaq2_0734 NC_016818.1 781273 781521 D PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 781273..781521 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790392 YP_005198794.1 CDS Rahaq2_0735 NC_016818.1 781540 782088 D PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 781540..782088 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790393 YP_005198795.1 CDS Rahaq2_0736 NC_016818.1 782165 782938 D PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N1)-methyltransferase 782165..782938 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790394 YP_005198796.1 CDS Rahaq2_0737 NC_016818.1 782987 783334 D PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 782987..783334 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790395 YP_005198797.1 CDS Rahaq2_0738 NC_016818.1 783426 783605 R PFAM: Ogr/Delta-like zinc finger; Ogr/Delta-like zinc finger complement(783426..783605) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790396 YP_005198798.1 CDS Rahaq2_0739 NC_016818.1 783671 784750 R PFAM: Phage late control gene D protein (GPD); phage protein D complement(783671..784750) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790397 YP_005198799.1 CDS Rahaq2_0740 NC_016818.1 784753 785223 R PFAM: Phage P2 GpU; phage protein U complement(784753..785223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790398 YP_005198800.1 CDS Rahaq2_0741 NC_016818.1 785220 786851 R TIGRFAM: phage tail tape measure protein, TP901 family, core region; phage tail tape measure protein, TP901 family complement(785220..786851) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790399 YP_005198801.1 CDS Rahaq2_0743 NC_016818.1 786999 787286 R PFAM: Phage tail protein E; Phage tail protein E complement(786999..787286) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790401 YP_005198802.1 CDS Rahaq2_0744 NC_016818.1 787345 787854 R PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family; phage contractile tail tube protein, P2 family complement(787345..787854) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790402 YP_005198803.1 CDS Rahaq2_0745 NC_016818.1 787869 789038 R PFAM: Phage tail sheath protein; phage tail sheath protein FI complement(787869..789038) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793831 YP_005198804.1 CDS Rahaq2_0746 NC_016818.1 789209 790240 R PFAM: Phage Tail Collar Domain; phage-related tail fiber protein complement(789209..790240) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790403 YP_005198805.1 CDS Rahaq2_0747 NC_016818.1 790230 790844 R PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein, P2 protein I family; phage tail protein, P2 protein I family complement(790230..790844) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790404 YP_005198806.1 CDS Rahaq2_0748 NC_016818.1 790837 791745 R PFAM: Baseplate J-like protein; phage-related baseplate assembly protein complement(790837..791745) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793832 YP_005198807.1 CDS Rahaq2_0749 NC_016818.1 791751 792101 R PFAM: Gene 25-like lysozyme; phage baseplate assembly protein W complement(791751..792101) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790405 YP_005198808.1 CDS Rahaq2_0750 NC_016818.1 792098 792739 R PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V; manually curated; phage baseplate assembly protein V complement(792098..792739) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790406 YP_005198809.1 CDS Rahaq2_0751 NC_016818.1 792819 793280 R PFAM: P2 phage tail completion protein R (GpR); P2 phage tail completion protein R (GpR) complement(792819..793280) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793833 YP_005198810.1 CDS Rahaq2_0752 NC_016818.1 793376 793801 R TIGRFAM: phage lysis regulatory protein, LysB family; phage lysis regulatory protein, LysB family complement(793376..793801) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790407 YP_005198811.1 CDS Rahaq2_0753 NC_016818.1 793802 794317 R PFAM: Phage lysozyme; phage-related lysozyme (muraminidase) complement(793802..794317) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790408 YP_005198812.1 CDS Rahaq2_0754 NC_016818.1 794292 794513 R hypothetical protein complement(794292..794513) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790409 YP_005198813.1 CDS Rahaq2_0755 NC_016818.1 794504 794707 R PFAM: Phage Tail Protein X; P2-like prophage tail protein X complement(794504..794707) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790410 YP_005198814.1 CDS Rahaq2_0756 NC_016818.1 794919 795113 R hypothetical protein complement(794919..795113) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790411 YP_005198815.1 CDS Rahaq2_0757 NC_016818.1 795226 797154 R PFAM: Bacteriophage replication gene A protein (GPA); Bacteriophage replication gene A protein (GPA) complement(795226..797154) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790412 YP_005198816.1 CDS Rahaq2_0758 NC_016818.1 797248 797469 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; phage/conjugal plasmid C-4 type zinc finger protein, TraR family complement(797248..797469) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790413 YP_005198817.1 CDS Rahaq2_0759 NC_016818.1 797469 797744 R hypothetical protein complement(797469..797744) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790414 YP_005198818.1 CDS Rahaq2_0760 NC_016818.1 797877 798467 D PFAM: Bacteriophage CI repressor helix-turn-helix domain; bacteriophage CI repressor-like protein 797877..798467 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790415 YP_005198819.1 CDS Rahaq2_0761 NC_016818.1 798758 799834 D PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase 798758..799834 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790416 YP_005198820.1 CDS Rahaq2_0762 NC_016818.1 799841 800962 D PFAM: Prephenate dehydrogenase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of T-protein; chorismate mutase domain of T-protein 799841..800962 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790417 YP_005198821.1 CDS Rahaq2_0763 NC_016818.1 801026 802180 R PFAM: Prephenate dehydratase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 1; chorismate mutase, putative; chorismate mutase domain-containing protein complement(801026..802180) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790418 YP_005198822.1 CDS Rahaq2_0764 NC_016818.1 802493 802837 R PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosomal subunit interface protein complement(802493..802837) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790419 YP_005198823.1 CDS Rahaq2_0765 NC_016818.1 803120 803854 R TIGRFAM: outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO complement(803120..803854) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790420 YP_005198824.1 CDS Rahaq2_0766 NC_016818.1 803985 804962 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase 803985..804962 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790421 YP_005198825.1 CDS Rahaq2_0767 NC_016818.1 804962 805699 D PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein 804962..805699 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790422 YP_005198826.1 CDS Rahaq2_0768 NC_016818.1 805830 808403 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone ClpB 805830..808403 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793834 YP_005198827.1 CDS Rahaq2_0774 NC_016818.1 814388 815686 D PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter; metabolite-proton symporter 814388..815686 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790427 YP_005198828.1 CDS Rahaq2_0775 NC_016818.1 815882 817237 R PFAM: Phospholipase D Active site motif; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase complement(815882..817237) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790428 YP_005198829.1 CDS Rahaq2_0776 NC_016818.1 817322 820042 R PFAM: Acetyltransferase (GNAT) family; acyl-CoA synthetase (NDP forming) complement(817322..820042) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790429 YP_005198830.1 CDS Rahaq2_0777 NC_016818.1 820074 820778 R PFAM: DTW domain; hypothetical protein complement(820074..820778) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790430 YP_005198831.1 CDS Rahaq2_0778 NC_016818.1 820907 821326 R PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin complement(820907..821326) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790431 YP_005198832.1 CDS Rahaq2_0779 NC_016818.1 821571 822674 D PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; rRNA methylase 821571..822674 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790432 YP_005198833.1 CDS Rahaq2_0780 NC_016818.1 822751 824286 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter complement(822751..824286) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790433 YP_005198834.1 CDS Rahaq2_0781 NC_016818.1 824304 825479 R PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A); efflux pump membrane protein, multidrug resistance protein A complement(824304..825479) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790434 YP_005198835.1 CDS Rahaq2_0782 NC_016818.1 825505 826959 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family efflux transporter outer membrane lipoprotein complement(825505..826959) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790435 YP_005198836.1 CDS Rahaq2_0783 NC_016818.1 826983 827504 R PFAM: MarR family; transcriptional regulator complement(826983..827504) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790436 YP_005198837.1 CDS Rahaq2_0784 NC_016818.1 827679 828017 R PFAM: Branched-chain amino acid transport protein (AzlD); Branched-chain amino acid transport protein AzlD complement(827679..828017) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790437 YP_005198838.1 CDS Rahaq2_0785 NC_016818.1 828007 828768 R PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; putative branched-chain amino acid permease (azaleucine resistance) complement(828007..828768) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790438 YP_005198839.1 CDS Rahaq2_0786 NC_016818.1 828943 830127 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(828943..830127) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790439 YP_005198840.1 CDS Rahaq2_0787 NC_016818.1 830292 830723 R PFAM: Uncharacterised protein family (UPF0150); hypothetical protein complement(830292..830723) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790440 YP_005198841.1 CDS Rahaq2_0788 NC_016818.1 830745 830927 R PFAM: YcfA-like protein; putative periplasmic or secreted lipoprotein complement(830745..830927) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793836 YP_005198842.1 CDS Rahaq2_0789 NC_016818.1 831045 832040 R PFAM: Substrate binding domain of ABC-type glycine betaine transport system; proline/glycine betaine ABC transporter periplasmic protein complement(831045..832040) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790441 YP_005198843.1 CDS Rahaq2_0790 NC_016818.1 832065 833063 R PFAM: Substrate binding domain of ABC-type glycine betaine transport system; proline/glycine betaine ABC transporter periplasmic protein complement(832065..833063) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790442 YP_005198844.1 CDS Rahaq2_0791 NC_016818.1 833212 834399 R PFAM: Binding-protein-dependent transport system inner membrane component; proline/glycine betaine ABC transporter permease complement(833212..834399) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793837 YP_005198845.1 CDS Rahaq2_0792 NC_016818.1 834396 835592 R PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; glycine betaine/L-proline ABC transporter ATP-binding protein complement(834396..835592) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790443 YP_005198846.1 CDS Rahaq2_0793 NC_016818.1 835750 835851 D hypothetical protein 835750..835851 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790444 YP_005198847.1 CDS Rahaq2_0794 NC_016818.1 836181 836894 R PFAM: Response regulator receiver domain; response regulator of citrate/malate metabolism complement(836181..836894) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793838 YP_005198848.1 CDS Rahaq2_0795 NC_016818.1 836887 838539 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; signal transduction histidine kinase regulating citrate/malate metabolism complement(836887..838539) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790445 YP_005198849.1 CDS Rahaq2_0796 NC_016818.1 838859 840214 D PFAM: 2-hydroxycarboxylate transporter family; Na+/citrate symporter 838859..840214 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790446 YP_005198850.1 CDS Rahaq2_0797 NC_016818.1 840408 840968 D PFAM: NlpC/P60 family; cell wall-associated hydrolase 840408..840968 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790447 YP_005198851.1 CDS Rahaq2_0798 NC_016818.1 841130 841681 D hypothetical protein 841130..841681 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790448 YP_005198852.1 CDS Rahaq2_0799 NC_016818.1 841783 842826 R PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein complement(841783..842826) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793839 YP_005198853.1 CDS Rahaq2_0800 NC_016818.1 842976 843959 R PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase subunit beta complement(842976..843959) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790449 YP_005198854.1 CDS Rahaq2_0801 NC_016818.1 843981 846143 R PFAM: Ribonucleotide reductase N-terminal; Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleoside-diphosphate reductase subunit alpha complement(843981..846143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790450 YP_005198855.1 CDS Rahaq2_0802 NC_016818.1 846125 846529 R PFAM: NrdI Flavodoxin like; TIGRFAM: ribonucleoside-diphosphate reductase 2, operon protein nrdI; ribonucleoside-diphosphate reductase 2, operon protein nrdI complement(846125..846529) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793840 YP_005198856.1 CDS Rahaq2_0803 NC_016818.1 846540 846779 R PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein NrdH; Glutaredoxin-like protein NrdH complement(846540..846779) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790451 YP_005198857.1 CDS Rahaq2_0806 NC_016818.1 847438 848157 R PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator complement(847438..848157) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790454 YP_005198858.1 CDS Rahaq2_0807 NC_016818.1 848346 850199 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIA component; PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component 848346..850199 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790455 YP_005198859.1 CDS Rahaq2_0808 NC_016818.1 850250 852877 D PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; alpha-mannosidase 850250..852877 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790456 YP_005198860.1 CDS Rahaq2_0809 NC_016818.1 853029 853334 R PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein complement(853029..853334) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790457 YP_005198861.1 CDS Rahaq2_0810 NC_016818.1 853609 854805 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 853609..854805 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790458 YP_005198862.1 CDS Rahaq2_0811 NC_016818.1 854932 855267 D PFAM: Protein of unknown function (DUF2002); hypothetical protein 854932..855267 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790459 YP_005198863.1 CDS Rahaq2_0812 NC_016818.1 855325 855765 R PFAM: Protein of unknown function (DUF1198); hypothetical protein complement(855325..855765) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793841 YP_005198864.1 CDS Rahaq2_0813 NC_016818.1 855967 856497 D PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative; adenylate cyclase 855967..856497 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790460 YP_005198865.1 CDS Rahaq2_0814 NC_016818.1 856546 857538 R PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; folate-binding protein YgfZ complement(856546..857538) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790461 YP_005198866.1 CDS Rahaq2_0815 NC_016818.1 857799 858083 D PFAM: Protein of unknown function (DUF339); hypothetical protein 857799..858083 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790462 YP_005198867.1 CDS Rahaq2_0816 NC_016818.1 858064 858516 D PFAM: Protein of unknown function (DUF1434); manually curated; hypothetical protein 858064..858516 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790463 YP_005198868.1 CDS Rahaq2_0817 NC_016818.1 858563 859093 R PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin, long chain complement(858563..859093) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790464 YP_005198869.1 CDS Rahaq2_0818 NC_016818.1 859181 860140 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase XerD 859181..860140 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790465 YP_005198870.1 CDS Rahaq2_0819 NC_016818.1 860166 860885 D PFAM: Disulfide bond isomerase protein N-terminus; protein-disulfide isomerase 860166..860885 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793842 YP_005198871.1 CDS Rahaq2_0820 NC_016818.1 860892 862625 D PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 860892..862625 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790466 YP_005198872.1 CDS Rahaq2_0821 NC_016818.1 862756 863854 D PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated; peptide chain release factor 2 join(862756..862830,862832..863854) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790467 YP_005198873.1 CDS Rahaq2_0822 NC_016818.1 863864 865393 D PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase 863864..865393 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790468 YP_005198874.1 CDS Rahaq2_0824 NC_016818.1 866041 867066 R hypothetical protein complement(866041..867066) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790469 YP_005198875.1 CDS Rahaq2_0825 NC_016818.1 867145 867411 R hypothetical protein complement(867145..867411) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790470 YP_005198876.1 CDS Rahaq2_0826 NC_016818.1 868333 868899 D PFAM: Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 868333..868899 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790471 YP_005198877.1 CDS Rahaq2_0827 NC_016818.1 869204 869995 D hypothetical protein 869204..869995 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790472 YP_005198878.1 CDS Rahaq2_0828 NC_016818.1 870168 870473 D hypothetical protein 870168..870473 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790473 YP_005198879.1 CDS Rahaq2_0829 NC_016818.1 870519 871475 D TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); hypothetical protein 870519..871475 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790474 YP_005198880.1 CDS Rahaq2_0830 NC_016818.1 871780 872064 D hypothetical protein 871780..872064 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790475 YP_005198881.1 CDS Rahaq2_0831 NC_016818.1 872094 872417 D hypothetical protein 872094..872417 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790476 YP_005198882.1 CDS Rahaq2_0832 NC_016818.1 872404 872763 D hypothetical protein 872404..872763 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790477 YP_005198883.1 CDS Rahaq2_0833 NC_016818.1 872860 873357 D PFAM: HNH endonuclease; HNH endonuclease 872860..873357 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790478 YP_005198884.1 CDS Rahaq2_0834 NC_016818.1 873529 874005 R hypothetical protein complement(873529..874005) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790479 YP_005198885.1 CDS Rahaq2_0835 NC_016818.1 874765 875010 R hypothetical protein complement(874765..875010) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790480 YP_005198886.1 CDS Rahaq2_0836 NC_016818.1 875151 876365 R PFAM: Phage integrase family; site-specific recombinase XerD complement(875151..876365) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793844 YP_005198887.1 CDS Rahaq2_0837 NC_016818.1 877253 877534 D putative transcriptional regulator 877253..877534 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790481 YP_005198888.1 CDS Rahaq2_0838 NC_016818.1 877576 878937 R PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase complement(877576..878937) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790482 YP_005198889.1 CDS Rahaq2_0839 NC_016818.1 879103 879444 R PFAM: NIPSNAP; hypothetical protein complement(879103..879444) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790483 YP_005198890.1 CDS Rahaq2_0841 NC_016818.1 879808 880992 R PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; arabinose efflux permease family protein complement(879808..880992) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790485 YP_005198891.1 CDS Rahaq2_0842 NC_016818.1 881165 881707 R PFAM: D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase complement(881165..881707) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790486 YP_005198892.1 CDS Rahaq2_0843 NC_016818.1 881704 882534 R PFAM: Peptidase C26; putative glutamine amidotransferase complement(881704..882534) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793845 YP_005198893.1 CDS Rahaq2_0844 NC_016818.1 883004 884347 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 883004..884347 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790487 YP_005198894.1 CDS Rahaq2_0845 NC_016818.1 884344 887538 D PFAM: AcrB/AcrD/AcrF family; cation/multidrug efflux pump 884344..887538 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790488 YP_005198895.1 CDS Rahaq2_0846 NC_016818.1 887539 890664 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; cation/multidrug efflux pump 887539..890664 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790489 YP_005198896.1 CDS Rahaq2_0847 NC_016818.1 890657 892105 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family efflux transporter outer membrane lipoprotein 890657..892105 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790490 YP_005198897.1 CDS Rahaq2_0849 NC_016818.1 892293 892475 R hypothetical protein complement(892293..892475) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790492 YP_005198898.1 CDS Rahaq2_0850 NC_016818.1 892468 892647 R hypothetical protein complement(892468..892647) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790493 YP_005198899.1 CDS Rahaq2_0852 NC_016818.1 893169 893845 D manually curated; hypothetical protein join(893169..893525,893525..893845) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790495 YP_005198900.1 CDS Rahaq2_0853 NC_016818.1 894085 894564 D PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector 894085..894564 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790496 YP_005198901.1 CDS Rahaq2_0855 NC_016818.1 895015 895272 D PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family; RelB/DinJ family addiction module antitoxin 895015..895272 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790498 YP_005198902.1 CDS Rahaq2_0856 NC_016818.1 895359 896762 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family efflux transporter outer membrane lipoprotein complement(895359..896762) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790499 YP_005198903.1 CDS Rahaq2_0857 NC_016818.1 896755 899904 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(896755..899904) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793846 YP_005198904.1 CDS Rahaq2_0858 NC_016818.1 899914 901047 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit complement(899914..901047) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790500 YP_005198905.1 CDS Rahaq2_0859 NC_016818.1 901664 903265 D PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-like IIB component 901664..903265 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790501 YP_005198906.1 CDS Rahaq2_0860 NC_016818.1 903272 904012 R PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator complement(903272..904012) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793847 YP_005198907.1 CDS Rahaq2_0861 NC_016818.1 904194 905948 R PFAM: ABC transporter; ABC transporter transmembrane region 2; ABC transporter permease/ATPase complement(904194..905948) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790502 YP_005198908.1 CDS Rahaq2_0862 NC_016818.1 906078 906794 D hypothetical protein 906078..906794 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790503 YP_005198909.1 CDS Rahaq2_0863 NC_016818.1 906937 907806 R PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase complement(906937..907806) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790504 YP_005198910.1 CDS Rahaq2_0864 NC_016818.1 907922 908839 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 907922..908839 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790505 YP_005198911.1 CDS Rahaq2_0865 NC_016818.1 909058 910221 D PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; arabinose efflux permease family protein 909058..910221 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790506 YP_005198912.1 CDS Rahaq2_0866 NC_016818.1 910286 911302 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(910286..911302) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790507 YP_005198913.1 CDS Rahaq2_0867 NC_016818.1 911344 912603 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 911344..912603 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793848 YP_005198914.1 CDS Rahaq2_0868 NC_016818.1 912777 913094 R PFAM: PTS system, Lactose/Cellobiose specific IIA subunit; PTS system cellobiose-specific transporter subunit IIA complement(912777..913094) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790508 YP_005198915.1 CDS Rahaq2_0869 NC_016818.1 913372 914715 D PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component; PTS system, lactose/cellobiose family IIC component 913372..914715 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790509 YP_005198916.1 CDS Rahaq2_0870 NC_016818.1 914741 916177 D PFAM: Glycosyl hydrolase family 1; beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase 914741..916177 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790510 YP_005198917.1 CDS Rahaq2_0871 NC_016818.1 916192 916509 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component; PTS system cellobiose-specific transporter subunit IIB 916192..916509 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790511 YP_005198918.1 CDS Rahaq2_0872 NC_016818.1 916548 917321 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 916548..917321 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790512 YP_005198919.1 CDS Rahaq2_0873 NC_016818.1 917327 917776 D PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase 917327..917776 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790513 YP_005198920.1 CDS Rahaq2_0874 NC_016818.1 917773 918780 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(917773..918780) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790514 YP_005198921.1 CDS Rahaq2_0875 NC_016818.1 918997 919917 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(918997..919917) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790515 YP_005198922.1 CDS Rahaq2_0876 NC_016818.1 920037 921008 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 920037..921008 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790516 YP_005198923.1 CDS Rahaq2_0877 NC_016818.1 921086 921979 D hypothetical protein 921086..921979 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790517 YP_005198924.1 CDS Rahaq2_0878 NC_016818.1 922042 922773 D PFAM: Uncharacterized protein conserved in bacteria (DUF2257); hypothetical protein 922042..922773 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790518 YP_005198925.1 CDS Rahaq2_0879 NC_016818.1 922770 923501 D PFAM: short chain dehydrogenase; dehydrogenase 922770..923501 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790519 YP_005198926.1 CDS Rahaq2_0880 NC_016818.1 923549 924805 D PFAM: ATP-grasp domain; biotin carboxylase 923549..924805 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793849 YP_005198927.1 CDS Rahaq2_0881 NC_016818.1 924865 926103 D PFAM: Major Facilitator Superfamily; major facilitator superfamily transporter 924865..926103 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790520 YP_005198928.1 CDS Rahaq2_0882 NC_016818.1 926241 928499 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; anaerobic dehydrogenase, typically selenocysteine-containing 926241..928499 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790521 YP_005198929.1 CDS Rahaq2_0884 NC_016818.1 928858 931023 D PFAM: Acyltransferase; AMP-binding enzyme; acyl-CoA synthetase 928858..931023 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790522 YP_005198930.1 CDS Rahaq2_0885 NC_016818.1 931020 932231 D PFAM: Major Facilitator Superfamily; major facilitator superfamily transporter 931020..932231 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790523 YP_005198931.1 CDS Rahaq2_0886 NC_016818.1 932293 933333 R PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein complement(932293..933333) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790524 YP_005198932.1 CDS Rahaq2_0887 NC_016818.1 933518 933739 R PFAM: Prokaryotic membrane lipoprotein lipid attachment site; Bacterial protein of unknown function (DUF903); hypothetical protein complement(933518..933739) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790525 YP_005198933.1 CDS Rahaq2_0888 NC_016818.1 933823 934509 R PFAM: DNA mismatch repair enzyme MutH; TIGRFAM: DNA mismatch repair endonuclease MutH; DNA mismatch repair endonuclease MutH complement(933823..934509) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793851 YP_005198934.1 CDS Rahaq2_0889 NC_016818.1 935205 935732 D PFAM: NUDIX domain; NTP pyrophosphohydrolase 935205..935732 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790526 YP_005198935.1 CDS Rahaq2_0890 NC_016818.1 935744 937990 D PFAM: GAF domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; manually curated; phosphoenolpyruvate-protein phosphotransferase 935744..937990 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790527 YP_005198936.1 CDS Rahaq2_0891 NC_016818.1 938173 939042 D PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 938173..939042 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790528 YP_005198937.1 CDS Rahaq2_0892 NC_016818.1 939049 939843 D PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase 939049..939843 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790529 YP_005198938.1 CDS Rahaq2_0893 NC_016818.1 940122 940583 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 940122..940583 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790530 YP_005198939.1 CDS Rahaq2_0894 NC_016818.1 940574 941161 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 940574..941161 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790531 YP_005198940.1 CDS Rahaq2_0895 NC_016818.1 941158 941646 D PFAM: Protein of unknown function (DUF2509); hypothetical protein 941158..941646 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790532 YP_005198941.1 CDS Rahaq2_0896 NC_016818.1 941639 941983 D PFAM: Prepilin peptidase dependent protein C; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 941639..941983 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790533 YP_005198942.1 CDS Rahaq2_0897 NC_016818.1 942286 945171 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); secreted/periplasmic Zn-dependent peptidase, insulinase 942286..945171 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790534 YP_005198943.1 CDS Rahaq2_0898 NC_016818.1 945247 946572 R PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase; amino-acid N-acetyltransferase complement(945247..946572) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790535 YP_005198944.1 CDS Rahaq2_0899 NC_016818.1 946801 948051 D PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; N-acetylmuramoyl-L-alanine amidase 946801..948051 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790536 YP_005198945.1 CDS Rahaq2_0903 NC_016818.1 948738 949850 D PFAM: MltA specific insert domain; 3D domain; membrane-bound lytic murein transglycosylase 948738..949850 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790540 YP_005198946.1 CDS Rahaq2_0904 NC_016818.1 949911 950726 D PFAM: ThiF family; dinucleotide-utilizing protein 949911..950726 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790541 YP_005198947.1 CDS Rahaq2_0905 NC_016818.1 950714 951151 R PFAM: Fe-S metabolism associated domain; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; cysteine desulfurase, sulfur acceptor subunit CsdE complement(950714..951151) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793852 YP_005198948.1 CDS Rahaq2_0906 NC_016818.1 951172 952377 R PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase, catalytic subunit CsdA; cysteine desulfurases, SufS subfamily; cysteine desulfurase, catalytic subunit CsdA complement(951172..952377) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790542 YP_005198949.1 CDS Rahaq2_0907 NC_016818.1 952565 952786 D PFAM: Bacterial protein of unknown function (DUF903); hypothetical protein 952565..952786 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790543 YP_005198950.1 CDS Rahaq2_0909 NC_016818.1 953281 954201 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 953281..954201 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790545 YP_005198951.1 CDS Rahaq2_0910 NC_016818.1 954296 954691 D PFAM: Protein of unknown function (DUF423); hypothetical protein 954296..954691 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790546 YP_005198952.1 CDS Rahaq2_0911 NC_016818.1 954684 955790 D PFAM: FtsJ-like methyltransferase; putative SAM-dependent methyltransferase 954684..955790 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790547 YP_005198953.1 CDS Rahaq2_0912 NC_016818.1 955815 955910 D hypothetical protein 955815..955910 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790548 YP_005198954.1 CDS Rahaq2_0913 NC_016818.1 955961 956713 R PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease complement(955961..956713) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793853 YP_005198955.1 CDS Rahaq2_0914 NC_016818.1 956792 958156 R PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase; putative Rossmann fold nucleotide-binding protein complement(956792..958156) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790549 YP_005198956.1 CDS Rahaq2_0915 NC_016818.1 958326 959171 R PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; 7-cyano-7-deazaguanine reductase complement(958326..959171) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790550 YP_005198957.1 CDS Rahaq2_0916 NC_016818.1 959248 959799 D PFAM: Syd protein; Syd protein 959248..959799 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790551 YP_005198958.1 CDS Rahaq2_0917 NC_016818.1 960461 961699 R PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport; arabinose efflux permease family protein complement(960461..961699) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790552 YP_005198959.1 CDS Rahaq2_0918 NC_016818.1 961890 962204 D PFAM: Domain of unknown function, DUF446; hypothetical protein 961890..962204 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793854 YP_005198960.1 CDS Rahaq2_0919 NC_016818.1 962206 962985 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; 23S RNA-specific pseudouridylate synthase 962206..962985 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793855 YP_005198961.1 CDS Rahaq2_0920 NC_016818.1 963028 963477 D PFAM: Flavodoxin; flavodoxin 963028..963477 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790553 YP_005198962.1 CDS Rahaq2_0921 NC_016818.1 963567 963956 R PFAM: Protein of unknown function (DUF3461); hypothetical protein complement(963567..963956) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790554 YP_005198963.1 CDS Rahaq2_0922 NC_016818.1 964103 964927 R TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase complement(964103..964927) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790555 YP_005198964.1 CDS Rahaq2_0923 NC_016818.1 964973 967663 R PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; (protein-PII) uridylyltransferase complement(964973..967663) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790556 YP_005198965.1 CDS Rahaq2_0924 NC_016818.1 967774 968565 R PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase complement(967774..968565) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790557 YP_005198966.1 CDS Rahaq2_0926 NC_016818.1 968933 969658 D PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 968933..969658 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790559 YP_005198967.1 CDS Rahaq2_0927 NC_016818.1 969806 970657 D PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts 969806..970657 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790560 YP_005198968.1 CDS Rahaq2_0928 NC_016818.1 970816 971547 D PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase 970816..971547 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790561 YP_005198969.1 CDS Rahaq2_0929 NC_016818.1 971656 972213 D PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 971656..972213 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790562 YP_005198970.1 CDS Rahaq2_0930 NC_016818.1 972371 973567 D PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 972371..973567 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790563 YP_005198971.1 CDS Rahaq2_0931 NC_016818.1 973855 974613 D PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl diphosphate synthase 973855..974613 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790564 YP_005198972.1 CDS Rahaq2_0932 NC_016818.1 974623 975471 D PFAM: Cytidylyltransferase family; CDP-diglyceride synthetase 974623..975471 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790565 YP_005198973.1 CDS Rahaq2_0933 NC_016818.1 975514 976869 D PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; RIP metalloprotease RseP 975514..976869 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790566 YP_005198974.1 CDS Rahaq2_0934 NC_016818.1 976906 979326 D PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein 976906..979326 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790567 YP_005198975.1 CDS Rahaq2_0935 NC_016818.1 979479 979976 D PFAM: Outer membrane protein (OmpH-like); outer membrane protein 979479..979976 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790568 YP_005198976.1 CDS Rahaq2_0936 NC_016818.1 979979 981001 D PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 979979..981001 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790569 YP_005198977.1 CDS Rahaq2_0937 NC_016818.1 981149 981604 D PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ 981149..981604 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790570 YP_005198978.1 CDS Rahaq2_0938 NC_016818.1 981608 982396 D PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 981608..982396 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790571 YP_005198979.1 CDS Rahaq2_0939 NC_016818.1 982415 983563 D PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; lipid-A-disaccharide synthase 982415..983563 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790572 YP_005198980.1 CDS Rahaq2_0940 NC_016818.1 983560 984156 D PFAM: Ribonuclease HII; ribonuclease HII 983560..984156 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790573 YP_005198981.1 CDS Rahaq2_0941 NC_016818.1 984240 987722 D PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA-directed DNA polymerase III PolC 984240..987722 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790574 YP_005198982.1 CDS Rahaq2_0942 NC_016818.1 987735 988694 D PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 987735..988694 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790575 YP_005198983.1 CDS Rahaq2_0943 NC_016818.1 988884 991031 D PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain; arginine/lysine/ornithine decarboxylase 988884..991031 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790576 YP_005198984.1 CDS Rahaq2_0944 NC_016818.1 991118 991507 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase 991118..991507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790577 YP_005198985.1 CDS Rahaq2_0945 NC_016818.1 991515 992861 D PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase 991515..992861 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790578 YP_005198986.1 CDS Rahaq2_0946 NC_016818.1 992912 993244 D PFAM: Cytochrome c; cytochrome c553 992912..993244 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790579 YP_005198987.1 CDS Rahaq2_0947 NC_016818.1 993311 993571 R PFAM: Modulator of Rho-dependent transcription termination (ROF); transcriptional antiterminator complement(993311..993571) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790580 YP_005198988.1 CDS Rahaq2_0948 NC_016818.1 993558 993758 R PFAM: Uncharacterised protein family (UPF0253); hypothetical protein complement(993558..993758) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790581 YP_005198989.1 CDS Rahaq2_0949 NC_016818.1 993974 994534 D PFAM: YaeQ protein; hypothetical protein 993974..994534 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790582 YP_005198990.1 CDS Rahaq2_0950 NC_016818.1 994540 994950 D PFAM: RF-1 domain; protein chain release factor B 994540..994950 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790583 YP_005198991.1 CDS Rahaq2_0951 NC_016818.1 995016 995693 D PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance; putative lipoprotein NlpE involved in copper resistance 995016..995693 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790584 YP_005198992.1 CDS Rahaq2_0952 NC_016818.1 995780 997498 R PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase, family II complement(995780..997498) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790585 YP_005198993.1 CDS Rahaq2_0953 NC_016818.1 997617 998324 R PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family; putative methyltransferase, YaeB/AF_0241 family complement(997617..998324) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793856 YP_005198994.1 CDS Rahaq2_0954 NC_016818.1 998321 998728 R hypothetical protein complement(998321..998728) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790586 YP_005198995.1 CDS Rahaq2_0955 NC_016818.1 998917 999732 R PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; lipoprotein complement(998917..999732) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790587 YP_005198996.1 CDS Rahaq2_0956 NC_016818.1 999800 1000453 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type metal ion transport system permease complement(999800..1000453) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790588 YP_005198997.1 CDS Rahaq2_0957 NC_016818.1 1000446 1001477 R PFAM: ABC transporter; NIL domain; TIGRFAM: D-methionine ABC transporter, ATP-binding protein; D-methionine ABC transporter ATP-binding protein complement(1000446..1001477) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790589 YP_005198998.1 CDS Rahaq2_0958 NC_016818.1 1001657 1002223 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain; D,D-heptose 1,7-bisphosphate phosphatase 1001657..1002223 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790590 YP_005198999.1 CDS Rahaq2_0964 NC_016818.1 1008405 1009130 D manually curated; hypothetical protein 1008405..1009130 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790596 YP_005199000.1 CDS Rahaq2_0965 NC_016818.1 1009130 1009942 D PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1009130..1009942 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790597 YP_005199001.1 CDS Rahaq2_0966 NC_016818.1 1009946 1010203 D PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 1009946..1010203 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790598 YP_005199002.1 CDS Rahaq2_0967 NC_016818.1 1010145 1010468 D PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 1010145..1010468 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790599 YP_005199003.1 CDS Rahaq2_0968 NC_016818.1 1010489 1011079 D hypothetical protein 1010489..1011079 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790600 YP_005199004.1 CDS Rahaq2_0969 NC_016818.1 1011076 1012425 D PFAM: AMP-binding enzyme; acyl-CoA synthetase/AMP-acid ligase 1011076..1012425 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790601 YP_005199005.1 CDS Rahaq2_0970 NC_016818.1 1012422 1012766 D PFAM: FabA-like domain; (3R)-hydroxymyristoyl-ACP dehydratase 1012422..1012766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793857 YP_005199006.1 CDS Rahaq2_0971 NC_016818.1 1012763 1014478 D PFAM: Glycosyl transferase family 2; manually curated; putative acyltransferase 1012763..1014478 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793858 YP_005199007.1 CDS Rahaq2_0972 NC_016818.1 1014480 1014923 D PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; putative thioesterase 1014480..1014923 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790602 YP_005199008.1 CDS Rahaq2_0973 NC_016818.1 1014920 1015525 D PFAM: Outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein-sorting protein 1014920..1015525 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790603 YP_005199009.1 CDS Rahaq2_0974 NC_016818.1 1015515 1017821 D PFAM: MMPL family; putative exporter 1015515..1017821 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790604 YP_005199010.1 CDS Rahaq2_0975 NC_016818.1 1017818 1018393 D PFAM: Protein of unknown function (DUF3261); hypothetical protein 1017818..1018393 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790605 YP_005199011.1 CDS Rahaq2_0976 NC_016818.1 1018395 1019567 D PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase 1018395..1019567 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790606 YP_005199012.1 CDS Rahaq2_0977 NC_016818.1 1019564 1020043 D hypothetical protein 1019564..1020043 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790607 YP_005199013.1 CDS Rahaq2_0978 NC_016818.1 1020043 1020771 D PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; 3-oxoacyl-ACP reductase 1020043..1020771 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790608 YP_005199014.1 CDS Rahaq2_0979 NC_016818.1 1020768 1021997 D PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase 1020768..1021997 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790609 YP_005199015.1 CDS Rahaq2_0980 NC_016818.1 1022000 1022689 D PFAM: 4'-phosphopantetheinyl transferase superfamily; phosphopantetheinyl transferase 1022000..1022689 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790610 YP_005199016.1 CDS Rahaq2_0981 NC_016818.1 1022786 1023682 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(1022786..1023682) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790611 YP_005199017.1 CDS Rahaq2_0982 NC_016818.1 1023982 1024761 D PFAM: Endonuclease/Exonuclease/phosphatase family; hypothetical protein 1023982..1024761 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790612 YP_005199018.1 CDS Rahaq2_0983 NC_016818.1 1024849 1026237 R PFAM: Transglycosylase SLT domain; MLTD_N; LysM domain; lytic murein transglycosylase complement(1024849..1026237) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790613 YP_005199019.1 CDS Rahaq2_0984 NC_016818.1 1026307 1027062 R PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase complement(1026307..1027062) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790614 YP_005199020.1 CDS Rahaq2_0985 NC_016818.1 1027106 1027831 D PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 1027106..1027831 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790615 YP_005199021.1 CDS Rahaq2_0986 NC_016818.1 1027892 1028359 R PFAM: RNase H; ribonuclease HI complement(1027892..1028359) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790616 YP_005199022.1 CDS Rahaq2_0987 NC_016818.1 1028631 1029515 D PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase; N-carbamoylputrescine amidase 1028631..1029515 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793859 YP_005199023.1 CDS Rahaq2_0988 NC_016818.1 1029519 1030604 D PFAM: Porphyromonas-type peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase; agmatine deiminase 1029519..1030604 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790617 YP_005199024.1 CDS Rahaq2_0989 NC_016818.1 1030687 1031424 D PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial; DNA polymerase III subunit epsilon 1030687..1031424 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790618 YP_005199025.1 CDS Rahaq2_0991 NC_016818.1 1031724 1033226 R PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family; cytosine/purines uracil thiamine allantoin permease complement(1031724..1033226) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790620 YP_005199026.1 CDS Rahaq2_0992 NC_016818.1 1033404 1034138 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 1033404..1034138 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793860 YP_005199027.1 CDS Rahaq2_0993 NC_016818.1 1034138 1034896 D PFAM: Asp/Glu/Hydantoin racemase; hydantoin racemase 1034138..1034896 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790621 YP_005199028.1 CDS Rahaq2_0994 NC_016818.1 1034889 1035827 D PFAM: Polysaccharide deacetylase; TIGRFAM: putative urate catabolism protein; putative urate catabolism protein 1034889..1035827 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790622 YP_005199029.1 CDS Rahaq2_0995 NC_016818.1 1036060 1036443 R PFAM: Protein of unknown function (DUF3225); hypothetical protein complement(1036060..1036443) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790623 YP_005199030.1 CDS Rahaq2_0996 NC_016818.1 1036497 1037900 R PFAM: Amidase; TIGRFAM: amidohydrolase, AtzE family; amidohydrolase, AtzE family complement(1036497..1037900) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793861 YP_005199031.1 CDS Rahaq2_0997 NC_016818.1 1037915 1038109 R hypothetical protein complement(1037915..1038109) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790624 YP_005199032.1 CDS Rahaq2_0998 NC_016818.1 1038146 1039732 R PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(1038146..1039732) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790625 YP_005199033.1 CDS Rahaq2_0999 NC_016818.1 1039729 1039884 R hypothetical protein complement(1039729..1039884) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790626 YP_005199034.1 CDS Rahaq2_1000 NC_016818.1 1039933 1040772 D PFAM: Helix-turn-helix domain, rpiR family; SIS domain; transcriptional regulator 1039933..1040772 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790627 YP_005199035.1 CDS Rahaq2_1001 NC_016818.1 1041031 1041822 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 1041031..1041822 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790628 YP_005199036.1 CDS Rahaq2_1002 NC_016818.1 1041847 1042512 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 1041847..1042512 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790629 YP_005199037.1 CDS Rahaq2_1003 NC_016818.1 1042512 1043165 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 1042512..1043165 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790630 YP_005199038.1 CDS Rahaq2_1004 NC_016818.1 1043165 1043917 D PFAM: ABC transporter; polar amino acid ABC transporter ATPase 1043165..1043917 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790631 YP_005199039.1 CDS Rahaq2_1005 NC_016818.1 1043936 1045174 D PFAM: Aminotransferase class-V; serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 1043936..1045174 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790632 YP_005199040.1 CDS Rahaq2_1006 NC_016818.1 1045174 1046448 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family; amidase 1045174..1046448 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790633 YP_005199041.1 CDS Rahaq2_1007 NC_016818.1 1046445 1046939 D PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase; OHCU decarboxylase 1046445..1046939 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793862 YP_005199042.1 CDS Rahaq2_1008 NC_016818.1 1046939 1047274 D PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; hydroxyisourate hydrolase 1046939..1047274 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790634 YP_005199043.1 CDS Rahaq2_1009 NC_016818.1 1047287 1048555 R PFAM: Glutamine amidotransferase class-I; CTP synthase complement(1047287..1048555) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790635 YP_005199044.1 CDS Rahaq2_1010 NC_016818.1 1048769 1049275 D PFAM: Domain of unknown function (DUF1993); hypothetical protein 1048769..1049275 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790636 YP_005199045.1 CDS Rahaq2_1011 NC_016818.1 1049359 1050132 R PFAM: Carbon-nitrogen hydrolase; putative amidohydrolase complement(1049359..1050132) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790637 YP_005199046.1 CDS Rahaq2_1012 NC_016818.1 1050120 1051280 R PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase complement(1050120..1051280) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790638 YP_005199047.1 CDS Rahaq2_1013 NC_016818.1 1051500 1052114 D PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: methylthioribulose-1-phosphate dehydratase; methylthioribulose-1-phosphate dehydratase 1051500..1052114 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790639 YP_005199048.1 CDS Rahaq2_1014 NC_016818.1 1052111 1052797 D TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1052111..1052797 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793863 YP_005199049.1 CDS Rahaq2_1015 NC_016818.1 1052809 1053354 D PFAM: ARD/ARD' family; hypothetical protein 1052809..1053354 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793864 YP_005199050.1 CDS Rahaq2_1017 NC_016818.1 1053841 1054500 R PFAM: Putative bacterial lipoprotein (DUF799); hypothetical protein complement(1053841..1054500) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790641 YP_005199051.1 CDS Rahaq2_1018 NC_016818.1 1054497 1054874 R hypothetical protein complement(1054497..1054874) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790642 YP_005199052.1 CDS Rahaq2_1019 NC_016818.1 1054893 1055564 R PFAM: Curli production assembly/transport component CsgG; hypothetical protein complement(1054893..1055564) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790643 YP_005199053.1 CDS Rahaq2_1020 NC_016818.1 1055641 1055868 D hypothetical protein 1055641..1055868 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790644 YP_005199054.1 CDS Rahaq2_1021 NC_016818.1 1055865 1056893 R PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; S-methyl-5-thioribose-1-phosphate isomerase complement(1055865..1056893) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790645 YP_005199055.1 CDS Rahaq2_1022 NC_016818.1 1057009 1058208 D PFAM: Phosphotransferase enzyme family; TIGRFAM: 5-methylthioribose kinase; 5-methylthioribose kinase 1057009..1058208 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790646 YP_005199056.1 CDS Rahaq2_1023 NC_016818.1 1058304 1058774 D PFAM: Protein of unknown function (DUF1456); hypothetical protein 1058304..1058774 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790647 YP_005199057.1 CDS Rahaq2_1024 NC_016818.1 1059071 1060465 D hypothetical protein 1059071..1060465 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790648 YP_005199058.1 CDS Rahaq2_1025 NC_016818.1 1060676 1063144 R PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase complement(1060676..1063144) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790649 YP_005199059.1 CDS Rahaq2_1026 NC_016818.1 1063414 1063995 D PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; phosphoheptose isomerase 1063414..1063995 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790650 YP_005199060.1 CDS Rahaq2_1027 NC_016818.1 1064023 1064790 D PFAM: Glutamine amidotransferases class-II; putative glutamine amidotransferase 1064023..1064790 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790651 YP_005199061.1 CDS Rahaq2_1028 NC_016818.1 1064761 1065486 R PFAM: L,D-transpeptidase catalytic domain; hypothetical protein complement(1064761..1065486) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790652 YP_005199062.1 CDS Rahaq2_1029 NC_016818.1 1065769 1066863 D PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; nucleotidyltransferase/DNA polymerase involved in DNA repair 1065769..1066863 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790653 YP_005199063.1 CDS Rahaq2_1030 NC_016818.1 1066957 1068417 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase complement(1066957..1068417) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790654 YP_005199064.1 CDS Rahaq2_1031 NC_016818.1 1068710 1069168 D PFAM: Phosphoribosyl transferase domain; PRPP-binding protein, adenine/guanine phosphoribosyltransferase 1068710..1069168 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790655 YP_005199065.1 CDS Rahaq2_1032 NC_016818.1 1069346 1070596 D PFAM: Alpha/beta hydrolase of unknown function (DUF1100); dienelactone hydrolase-like enzyme 1069346..1070596 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790656 YP_005199066.1 CDS Rahaq2_1033 NC_016818.1 1070661 1071062 D PFAM: Transcriptional regulator Crl; transcriptional regulator Crl 1070661..1071062 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790657 YP_005199067.1 CDS Rahaq2_1034 NC_016818.1 1071185 1072288 D PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 1071185..1072288 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790658 YP_005199068.1 CDS Rahaq2_1035 NC_016818.1 1072299 1073552 D PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 1072299..1073552 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790659 YP_005199069.1 CDS Rahaq2_1036 NC_016818.1 1073617 1074510 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(1073617..1074510) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790660 YP_005199070.1 CDS Rahaq2_1037 NC_016818.1 1074643 1075521 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 1074643..1075521 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790661 YP_005199071.1 CDS Rahaq2_1038 NC_016818.1 1075535 1076512 D PFAM: alpha/beta hydrolase fold; lysophospholipase 1075535..1076512 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790662 YP_005199072.1 CDS Rahaq2_1040 NC_016818.1 1076744 1077004 R putative transcriptional regulator complement(1076744..1077004) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790664 YP_005199073.1 CDS Rahaq2_1041 NC_016818.1 1077116 1077376 D PFAM: Helix-turn-helix; putative transcriptional regulator 1077116..1077376 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790665 YP_005199074.1 CDS Rahaq2_1042 NC_016818.1 1077404 1077667 D PFAM: Colicin D; Colicin D 1077404..1077667 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793865 YP_005199075.1 CDS Rahaq2_1043 NC_016818.1 1077705 1077959 D PFAM: Colicin immunity protein / pyocin immunity protein; Colicin immunity protein / pyocin immunity protein 1077705..1077959 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790666 YP_005199076.1 CDS Rahaq2_1044 NC_016818.1 1078028 1078444 R hypothetical protein complement(1078028..1078444) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790667 YP_005199077.1 CDS Rahaq2_1045 NC_016818.1 1078761 1079246 D hypothetical protein 1078761..1079246 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790668 YP_005199078.1 CDS Rahaq2_1046 NC_016818.1 1079250 1080809 D PFAM: Cytotoxic; S-type Pyocin; putative cytotoxic protein 1079250..1080809 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790669 YP_005199079.1 CDS Rahaq2_1047 NC_016818.1 1080818 1081069 D PFAM: Cloacin immunity protein; Cloacin immunity protein 1080818..1081069 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793866 YP_005199080.1 CDS Rahaq2_1048 NC_016818.1 1081244 1083442 R PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein complement(1081244..1083442) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793867 YP_005199081.1 CDS Rahaq2_1049 NC_016818.1 1083446 1084397 R PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; manually curated; aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein complement(join(1083446..1084084,1084086..1084397)) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790670 YP_005199082.1 CDS Rahaq2_1050 NC_016818.1 1084394 1084933 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein complement(1084394..1084933) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790671 YP_005199083.1 CDS Rahaq2_1051 NC_016818.1 1085266 1085523 D PFAM: Protein of unknown function (DUF1471); hypothetical protein 1085266..1085523 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790672 YP_005199084.1 CDS Rahaq2_1052 NC_016818.1 1085837 1086364 R hypothetical protein complement(1085837..1086364) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790673 YP_005199085.1 CDS Rahaq2_1053 NC_016818.1 1086354 1087505 R PFAM: Helix-turn-helix; Domain of unknown function (DUF955); putative Zn peptidase complement(1086354..1087505) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790674 YP_005199086.1 CDS Rahaq2_1054 NC_016818.1 1087900 1088127 R hypothetical protein complement(1087900..1088127) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790675 YP_005199087.1 CDS Rahaq2_1055 NC_016818.1 1088216 1089127 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(1088216..1089127) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790676 YP_005199088.1 CDS Rahaq2_1056 NC_016818.1 1089224 1089970 D PFAM: short chain dehydrogenase; short-chain alcohol dehydrogenase 1089224..1089970 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790677 YP_005199089.1 CDS Rahaq2_1057 NC_016818.1 1090270 1091427 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase 1090270..1091427 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790678 YP_005199090.1 CDS Rahaq2_1058 NC_016818.1 1091492 1092274 R acetyltransferase complement(1091492..1092274) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790679 YP_005199091.1 CDS Rahaq2_1059 NC_016818.1 1092456 1094243 R PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(1092456..1094243) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793868 YP_005199092.1 CDS Rahaq2_1060 NC_016818.1 1094306 1094611 R PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain; selT/selW/selH selenoprotein domain protein complement(1094306..1094611) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790680 YP_005199093.1 CDS Rahaq2_1061 NC_016818.1 1094984 1098445 D PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 1094984..1098445 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790681 YP_005199094.1 CDS Rahaq2_1062 NC_016818.1 1098442 1102158 D PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 1098442..1102158 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790682 YP_005199095.1 CDS Rahaq2_1063 NC_016818.1 1102155 1104209 D PFAM: Putative ATPase (DUF699); TIGRFAM: exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 1102155..1104209 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790683 YP_005199096.1 CDS Rahaq2_1064 NC_016818.1 1104230 1104472 R hypothetical protein complement(1104230..1104472) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790684 YP_005199097.1 CDS Rahaq2_1065 NC_016818.1 1104596 1104703 R hypothetical protein complement(1104596..1104703) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790685 YP_005199098.1 CDS Rahaq2_1066 NC_016818.1 1104728 1104886 R hypothetical protein complement(1104728..1104886) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790686 YP_005199099.1 CDS Rahaq2_1067 NC_016818.1 1104979 1106223 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(1104979..1106223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790687 YP_005199100.1 CDS Rahaq2_1068 NC_016818.1 1106220 1107371 R PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C complement(1106220..1107371) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790688 YP_005199101.1 CDS Rahaq2_1069 NC_016818.1 1107486 1108394 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 1107486..1108394 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790689 YP_005199102.1 CDS Rahaq2_1070 NC_016818.1 1108422 1108913 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 1108422..1108913 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793869 YP_005199103.1 CDS Rahaq2_1071 NC_016818.1 1109028 1109507 D PFAM: Helix-turn-helix; putative transcriptional regulator 1109028..1109507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790690 YP_005199104.1 CDS Rahaq2_1072 NC_016818.1 1109641 1111203 D PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1109641..1111203 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790691 YP_005199105.1 CDS Rahaq2_1074 NC_016818.1 1111634 1112359 R PFAM: Protein of unknown function (DUF3053); hypothetical protein complement(1111634..1112359) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790693 YP_005199106.1 CDS Rahaq2_1075 NC_016818.1 1112512 1113597 D PFAM: Protein of unknown function (DUF1615); hypothetical protein 1112512..1113597 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790694 YP_005199107.1 CDS Rahaq2_1076 NC_016818.1 1113950 1114162 D PFAM: 'Cold-shock' DNA-binding domain; cold shock protein 1113950..1114162 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790695 YP_005199108.1 CDS Rahaq2_1078 NC_016818.1 1114836 1114973 R hypothetical protein complement(1114836..1114973) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790697 YP_005199109.1 CDS Rahaq2_1079 NC_016818.1 1115067 1115177 R hypothetical protein complement(1115067..1115177) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790698 YP_005199110.1 CDS Rahaq2_1080 NC_016818.1 1115653 1116990 D PFAM: Major Facilitator Superfamily; sugar phosphate permease 1115653..1116990 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790699 YP_005199111.1 CDS Rahaq2_1081 NC_016818.1 1116983 1118329 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase; L-alanine-DL-glutamate epimerase-like protein 1116983..1118329 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790700 YP_005199112.1 CDS Rahaq2_1082 NC_016818.1 1118370 1118573 R hypothetical protein complement(1118370..1118573) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790701 YP_005199113.1 CDS Rahaq2_1083 NC_016818.1 1118710 1119960 R PFAM: Major Facilitator Superfamily; TIGRFAM: Oxalate/Formate Antiporter; Oxalate/Formate Antiporter complement(1118710..1119960) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793870 YP_005199114.1 CDS Rahaq2_1084 NC_016818.1 1120349 1121116 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(1120349..1121116) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793871 YP_005199115.1 CDS Rahaq2_1085 NC_016818.1 1121344 1121709 D hypothetical protein 1121344..1121709 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790702 YP_005199116.1 CDS Rahaq2_1086 NC_016818.1 1121916 1123862 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 1121916..1123862 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790703 YP_005199117.1 CDS Rahaq2_1087 NC_016818.1 1123876 1124631 R hypothetical protein complement(1123876..1124631) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790704 YP_005199118.1 CDS Rahaq2_1088 NC_016818.1 1124728 1125450 R hypothetical protein complement(1124728..1125450) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790705 YP_005199119.1 CDS Rahaq2_1089 NC_016818.1 1126181 1127644 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 1126181..1127644 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790706 YP_005199120.1 CDS Rahaq2_1090 NC_016818.1 1127644 1128399 D hypothetical protein 1127644..1128399 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790707 YP_005199121.1 CDS Rahaq2_1091 NC_016818.1 1128396 1129733 D PFAM: Response regulator receiver domain; Sigma-54 interaction domain; response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains 1128396..1129733 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790708 YP_005199122.1 CDS Rahaq2_1092 NC_016818.1 1129888 1130226 D PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII 1129888..1130226 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790709 YP_005199123.1 CDS Rahaq2_1093 NC_016818.1 1130645 1131166 D PFAM: Membrane bound FAD containing D-sorbitol dehydrogenase; Membrane bound FAD containing D-sorbitol dehydrogenase 1130645..1131166 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790710 YP_005199124.1 CDS Rahaq2_1094 NC_016818.1 1131193 1132794 D PFAM: GMC oxidoreductase; FAD dependent oxidoreductase; choline dehydrogenase-like flavoprotein 1131193..1132794 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793872 YP_005199125.1 CDS Rahaq2_1095 NC_016818.1 1132805 1134208 D PFAM: Cytochrome c; cytochrome c, mono- and diheme variants family 1132805..1134208 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790711 YP_005199126.1 CDS Rahaq2_1096 NC_016818.1 1134276 1135466 R PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain; hemoglobin-like flavoprotein complement(1134276..1135466) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790712 YP_005199127.1 CDS Rahaq2_1097 NC_016818.1 1135688 1137052 D PFAM: Serine hydroxymethyltransferase; glycine/serine hydroxymethyltransferase 1135688..1137052 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790713 YP_005199128.1 CDS Rahaq2_1098 NC_016818.1 1137216 1138376 D PFAM: Nucleoside H+ symporter; TIGRFAM: phenyl proprionate permease family protein; arabinose efflux permease family protein 1137216..1138376 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790714 YP_005199129.1 CDS Rahaq2_1099 NC_016818.1 1138373 1139653 R PFAM: PRD domain; transcriptional antiterminator complement(1138373..1139653) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790715 YP_005199130.1 CDS Rahaq2_1100 NC_016818.1 1139834 1140505 D PFAM: Protein of unknown function (DUF1007); ABC transporter substrate-binding protein 1139834..1140505 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790716 YP_005199131.1 CDS Rahaq2_1101 NC_016818.1 1140496 1141515 D PFAM: High-affinity nickel-transport protein; ABC transporter permease 1140496..1141515 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790717 YP_005199132.1 CDS Rahaq2_1102 NC_016818.1 1141596 1142399 R PFAM: Inositol monophosphatase family; inositol monophosphatase/fructose-1,6-bisphosphatase family protein complement(1141596..1142399) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790718 YP_005199133.1 CDS Rahaq2_1103 NC_016818.1 1142527 1143264 D PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1; RNA methyltransferase, TrmH family, group 1 1142527..1143264 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790719 YP_005199134.1 CDS Rahaq2_1104 NC_016818.1 1143480 1143974 D PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein; iron-sulfur cluster assembly transcription factor IscR 1143480..1143974 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790720 YP_005199135.1 CDS Rahaq2_1105 NC_016818.1 1144182 1145351 D PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase IscS; cysteine desulfurase IscS 1144182..1145351 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790721 YP_005199136.1 CDS Rahaq2_1106 NC_016818.1 1145433 1146743 D PFAM: Cytosol aminopeptidase family, catalytic domain; Peptidase; leucyl aminopeptidase 1145433..1146743 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790722 YP_005199137.1 CDS Rahaq2_1107 NC_016818.1 1146820 1147683 D PFAM: SseB protein; SseB protein 1146820..1147683 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793873 YP_005199138.1 CDS Rahaq2_1108 NC_016818.1 1147906 1148331 D PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 1147906..1148331 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793874 YP_005199139.1 CDS Rahaq2_1109 NC_016818.1 1148557 1149756 D PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; 2-vinyl bacteriochlorophyllide hydratase 1148557..1149756 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790723 YP_005199140.1 CDS Rahaq2_1110 NC_016818.1 1149846 1150607 D TIGRFAM: type IV pilus biogenesis/stability protein PilW; type IV pilus biogenesis/stability protein PilW 1149846..1150607 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790724 YP_005199141.1 CDS Rahaq2_1111 NC_016818.1 1150597 1151592 D PFAM: Helix-turn-helix; hypothetical protein 1150597..1151592 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790725 YP_005199142.1 CDS Rahaq2_1112 NC_016818.1 1151635 1152756 D PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1151635..1152756 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790726 YP_005199143.1 CDS Rahaq2_1113 NC_016818.1 1152893 1154167 D PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 1152893..1154167 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790727 YP_005199144.1 CDS Rahaq2_1114 NC_016818.1 1154181 1154801 D PFAM: Uncharacterized protein conserved in bacteria (DUF2133); hypothetical protein 1154181..1154801 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790728 YP_005199145.1 CDS Rahaq2_1115 NC_016818.1 1154813 1155994 D PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL; outer membrane assembly lipoprotein YfgL 1154813..1155994 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790729 YP_005199146.1 CDS Rahaq2_1116 NC_016818.1 1156217 1157701 D PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; ribosome-associated GTPase EngA 1156217..1157701 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790730 YP_005199147.1 CDS Rahaq2_1117 NC_016818.1 1157768 1158724 D PFAM: Membrane transport protein; putative permease 1157768..1158724 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790731 YP_005199148.1 CDS Rahaq2_1118 NC_016818.1 1158737 1158967 D PFAM: Protein of unknown function (DUF1407); hypothetical protein 1158737..1158967 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793875 YP_005199149.1 CDS Rahaq2_1119 NC_016818.1 1158952 1159296 R hypothetical protein complement(1158952..1159296) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793876 YP_005199150.1 CDS Rahaq2_1120 NC_016818.1 1159297 1160331 R PFAM: Thermolysin metallopeptidase, alpha-helical domain; Thermolysin metallopeptidase, catalytic domain; zinc metalloprotease complement(1159297..1160331) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790732 YP_005199151.1 CDS Rahaq2_1121 NC_016818.1 1160467 1161549 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(1160467..1161549) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790733 YP_005199152.1 CDS Rahaq2_1122 NC_016818.1 1161764 1163077 D PFAM: Major Facilitator Superfamily; sugar phosphate permease 1161764..1163077 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793877 YP_005199153.1 CDS Rahaq2_1123 NC_016818.1 1163074 1165455 D PFAM: Glycosyl hydrolases family 31; family 31 glycosyl hydrolase, alpha-glucosidase 1163074..1165455 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793878 YP_005199154.1 CDS Rahaq2_1124 NC_016818.1 1165509 1166882 R PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(1165509..1166882) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790734 YP_005199155.1 CDS Rahaq2_1125 NC_016818.1 1166883 1168517 D PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; inosine-5''-monophosphate dehydrogenase 1166883..1168517 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793879 YP_005199156.1 CDS Rahaq2_1126 NC_016818.1 1168622 1170199 D PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase 1168622..1170199 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790735 YP_005199157.1 CDS Rahaq2_1127 NC_016818.1 1170455 1171789 D PFAM: GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 1170455..1171789 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790736 YP_005199158.1 CDS Rahaq2_1128 NC_016818.1 1171909 1172682 R PFAM: Flavodoxin-like fold; putative NADPH-quinone reductase (modulator of drug activity B) complement(1171909..1172682) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790737 YP_005199159.1 CDS Rahaq2_1129 NC_016818.1 1172767 1173660 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 1172767..1173660 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790738 YP_005199160.1 CDS Rahaq2_1130 NC_016818.1 1173882 1174214 R PFAM: HicB family; protein encoded in hypervariable junctions of pilus gene clusters complement(1173882..1174214) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790739 YP_005199161.1 CDS Rahaq2_1131 NC_016818.1 1174211 1174474 R hypothetical protein complement(1174211..1174474) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790740 YP_005199162.1 CDS Rahaq2_1132 NC_016818.1 1174604 1175263 R PFAM: Protein of unknown function (DUF3313); hypothetical protein complement(1174604..1175263) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790741 YP_005199163.1 CDS Rahaq2_1133 NC_016818.1 1175402 1175836 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(1175402..1175836) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790742 YP_005199164.1 CDS Rahaq2_1134 NC_016818.1 1176123 1176932 D PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 1176123..1176932 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790743 YP_005199165.1 CDS Rahaq2_1135 NC_016818.1 1176929 1177729 D PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 1176929..1177729 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790744 YP_005199166.1 CDS Rahaq2_1136 NC_016818.1 1177737 1178585 R hypothetical protein complement(1177737..1178585) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790745 YP_005199167.1 CDS Rahaq2_1137 NC_016818.1 1178707 1179393 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(1178707..1179393) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790746 YP_005199168.1 CDS Rahaq2_1138 NC_016818.1 1179484 1180320 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain complement(1179484..1180320) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793880 YP_005199169.1 CDS Rahaq2_1139 NC_016818.1 1180593 1182002 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter 1180593..1182002 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790747 YP_005199170.1 CDS Rahaq2_1140 NC_016818.1 1182025 1183998 D PFAM: Putative glycosyl hydrolase of unknown function (DUF1680); hypothetical protein 1182025..1183998 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790748 YP_005199171.1 CDS Rahaq2_1141 NC_016818.1 1184016 1184558 R PFAM: Chorismate mutase type II; TIGRFAM: chorismate mutase, putative; chorismate mutase, putative complement(1184016..1184558) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793881 YP_005199172.1 CDS Rahaq2_1142 NC_016818.1 1184739 1186028 R PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter; sugar phosphate permease complement(1184739..1186028) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790749 YP_005199173.1 CDS Rahaq2_1143 NC_016818.1 1186152 1187165 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; theronine dehydrogenase-like Zn-dependent dehydrogenase complement(1186152..1187165) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790750 YP_005199174.1 CDS Rahaq2_1144 NC_016818.1 1187177 1188391 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; L-alanine-DL-glutamate epimerase-like protein complement(1187177..1188391) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790751 YP_005199175.1 CDS Rahaq2_1145 NC_016818.1 1188583 1189596 R PFAM: Malate/L-lactate dehydrogenase; malate/lactate dehydrogenase complement(1188583..1189596) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790752 YP_005199176.1 CDS Rahaq2_1146 NC_016818.1 1189583 1191145 R PFAM: Major Facilitator Superfamily; Na+/melibiose symporter-like transporter complement(1189583..1191145) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790753 YP_005199177.1 CDS Rahaq2_1147 NC_016818.1 1191390 1192277 R PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; lipid kinase YegS; lipid kinase YegS complement(1191390..1192277) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790754 YP_005199178.1 CDS Rahaq2_1148 NC_016818.1 1192648 1194033 R PFAM: Peptidase family U32; collagenase-like protease complement(1192648..1194033) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790755 YP_005199179.1 CDS Rahaq2_1149 NC_016818.1 1194220 1194567 R PFAM: Domain of unknown function (DUF1508); hypothetical protein complement(1194220..1194567) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790756 YP_005199180.1 CDS Rahaq2_1150 NC_016818.1 1194722 1195441 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(1194722..1195441) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790757 YP_005199181.1 CDS Rahaq2_1151 NC_016818.1 1195442 1196827 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(1195442..1196827) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790758 YP_005199182.1 CDS Rahaq2_1152 NC_016818.1 1196824 1198299 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter complement(1196824..1198299) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790759 YP_005199183.1 CDS Rahaq2_1153 NC_016818.1 1198561 1199514 D PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein 1198561..1199514 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790760 YP_005199184.1 CDS Rahaq2_1154 NC_016818.1 1199585 1200937 R PFAM: Hsp70 protein; molecular chaperone complement(1199585..1200937) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790761 YP_005199185.1 CDS Rahaq2_1155 NC_016818.1 1201078 1203072 R PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase complement(1201078..1203072) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790762 YP_005199186.1 CDS Rahaq2_1156 NC_016818.1 1203130 1204080 R PFAM: Transaldolase; TIGRFAM: transaldolase; transaldolase complement(1203130..1204080) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790763 YP_005199187.1 CDS Rahaq2_1157 NC_016818.1 1204466 1206745 D PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malic enzyme 1204466..1206745 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790764 YP_005199188.1 CDS Rahaq2_1158 NC_016818.1 1206789 1207736 R PFAM: Inosine-uridine preferring nucleoside hydrolase; Inosine-uridine nucleoside N-ribohydrolase complement(1206789..1207736) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790765 YP_005199189.1 CDS Rahaq2_1159 NC_016818.1 1207803 1208252 R PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein complement(1207803..1208252) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790766 YP_005199190.1 CDS Rahaq2_1160 NC_016818.1 1208252 1209187 R PFAM: Coproporphyrinogen III oxidase; coproporphyrinogen III oxidase complement(1208252..1209187) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790767 YP_005199191.1 CDS Rahaq2_1161 NC_016818.1 1209320 1210204 R PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(1209320..1210204) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790768 YP_005199192.1 CDS Rahaq2_1162 NC_016818.1 1210482 1210907 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase 1210482..1210907 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790769 YP_005199193.1 CDS Rahaq2_1163 NC_016818.1 1210971 1211372 R PFAM: Bacterial OB fold (BOF) protein; TIGRFAM: TIGR00156 family protein; hypothetical protein complement(1210971..1211372) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790770 YP_005199194.1 CDS Rahaq2_1164 NC_016818.1 1211606 1212049 D PFAM: Protein of unknown function (DUF2919); hypothetical protein 1211606..1212049 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793882 YP_005199195.1 CDS Rahaq2_1165 NC_016818.1 1212136 1212765 D PFAM: Protein of unknown function (DUF1131); hypothetical protein 1212136..1212765 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790771 YP_005199196.1 CDS Rahaq2_1166 NC_016818.1 1212871 1213770 D PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; dyp-type peroxidase family protein 1212871..1213770 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790772 YP_005199197.1 CDS Rahaq2_1167 NC_016818.1 1213980 1215002 D PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein; sulfate/thiosulfate-binding protein 1213980..1215002 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790773 YP_005199198.1 CDS Rahaq2_1168 NC_016818.1 1215002 1215832 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT; sulfate ABC transporter, permease protein CysT 1215002..1215832 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790774 YP_005199199.1 CDS Rahaq2_1169 NC_016818.1 1215832 1216707 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein; sulfate ABC transporter permease CysW 1215832..1216707 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790775 YP_005199200.1 CDS Rahaq2_1170 NC_016818.1 1216697 1217791 D PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein; sulfate ABC transporter ATP-binding protein 1216697..1217791 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790776 YP_005199201.1 CDS Rahaq2_1171 NC_016818.1 1217907 1218791 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; cysteine synthase B 1217907..1218791 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790777 YP_005199202.1 CDS Rahaq2_1172 NC_016818.1 1218894 1219577 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 1218894..1219577 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790778 YP_005199203.1 CDS Rahaq2_1173 NC_016818.1 1219582 1220907 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated; non-canonical start codon; signal transduction histidine kinase 1219582..1220907 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790779 YP_005199204.1 CDS Rahaq2_1174 NC_016818.1 1220962 1221471 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component; PTS system glucose subfamily transporter subunit IIA complement(1220962..1221471) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790780 YP_005199205.1 CDS Rahaq2_1175 NC_016818.1 1221520 1223247 R PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(1221520..1223247) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790781 YP_005199206.1 CDS Rahaq2_1176 NC_016818.1 1223297 1223554 R PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system HPr (HPr) family protein complement(1223297..1223554) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790782 YP_005199207.1 CDS Rahaq2_1177 NC_016818.1 1223958 1224923 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase A complement(1223958..1224923) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790783 YP_005199208.1 CDS Rahaq2_1178 NC_016818.1 1225134 1225934 R PFAM: Protein of unknown function (DUF540); hypothetical protein complement(1225134..1225934) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793883 YP_005199209.1 CDS Rahaq2_1179 NC_016818.1 1225965 1226114 D hypothetical protein 1225965..1226114 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790784 YP_005199210.1 CDS Rahaq2_1180 NC_016818.1 1226158 1227156 D PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA; cell division protein ZipA 1226158..1227156 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790785 YP_005199211.1 CDS Rahaq2_1181 NC_016818.1 1227228 1229249 D PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; NAD-dependent DNA ligase 1227228..1229249 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793884 YP_005199212.1 CDS Rahaq2_1182 NC_016818.1 1229252 1229494 D hypothetical protein 1229252..1229494 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790786 YP_005199213.1 CDS Rahaq2_1183 NC_016818.1 1229561 1230550 R PFAM: Sodium Bile acid symporter family; putative Na+-dependent transporter complement(1229561..1230550) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790787 YP_005199214.1 CDS Rahaq2_1184 NC_016818.1 1230648 1231574 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 1230648..1231574 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790788 YP_005199215.1 CDS Rahaq2_1185 NC_016818.1 1231608 1231961 R hypothetical protein complement(1231608..1231961) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793885 YP_005199216.1 CDS Rahaq2_1186 NC_016818.1 1232073 1232624 R PFAM: Bacterial protein of unknown function (DUF925); hypothetical protein complement(1232073..1232624) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790789 YP_005199217.1 CDS Rahaq2_1187 NC_016818.1 1232902 1234311 D PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; ethanolamine permease 1232902..1234311 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790790 YP_005199218.1 CDS Rahaq2_1188 NC_016818.1 1234333 1235715 D PFAM: Ethanolamine ammonia lyase large subunit (EutB); ethanolamine ammonia-lyase, large subunit 1234333..1235715 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790791 YP_005199219.1 CDS Rahaq2_1189 NC_016818.1 1235727 1236536 D PFAM: Ethanolamine ammonia-lyase light chain (EutC); ethanolamine ammonia-lyase, small subunit 1235727..1236536 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790792 YP_005199220.1 CDS Rahaq2_1194 NC_016818.1 1237310 1238728 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 1237310..1238728 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790796 YP_005199221.1 CDS Rahaq2_1195 NC_016818.1 1238819 1239610 R PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate/nitrite transporter family protein complement(1238819..1239610) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790797 YP_005199222.1 CDS Rahaq2_1198 NC_016818.1 1240325 1241512 R PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; nucleoside transporter complement(1240325..1241512) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790800 YP_005199223.1 CDS Rahaq2_1199 NC_016818.1 1241711 1241977 D hypothetical protein 1241711..1241977 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790801 YP_005199224.1 CDS Rahaq2_1200 NC_016818.1 1241929 1243158 D PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters; natural resistance-associated macrophage protein metal ion transporter NRAMP 1241929..1243158 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790802 YP_005199225.1 CDS Rahaq2_1202 NC_016818.1 1243827 1244816 R PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein complement(1243827..1244816) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790804 YP_005199226.1 CDS Rahaq2_1203 NC_016818.1 1245145 1246803 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate decarboxylase, Erwinia family; thiamine pyrophosphate dependent decarboxylase, pyruvate decarboxylase 1245145..1246803 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790805 YP_005199227.1 CDS Rahaq2_1204 NC_016818.1 1246792 1247679 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(1246792..1247679) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790806 YP_005199228.1 CDS Rahaq2_1205 NC_016818.1 1247824 1248297 D PFAM: Bacterial Transmembrane Pair family; hypothetical protein 1247824..1248297 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793887 YP_005199229.1 CDS Rahaq2_1206 NC_016818.1 1248400 1249098 D PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; aspartate racemase 1248400..1249098 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790807 YP_005199230.1 CDS Rahaq2_1207 NC_016818.1 1249095 1250357 R PFAM: Voltage gated chloride channel; chloride channel protein EriC complement(1249095..1250357) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790808 YP_005199231.1 CDS Rahaq2_1208 NC_016818.1 1250576 1251541 D PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; glucokinase 1250576..1251541 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790809 YP_005199232.1 CDS Rahaq2_1209 NC_016818.1 1251745 1252251 D hypothetical protein 1251745..1252251 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790810 YP_005199233.1 CDS Rahaq2_1210 NC_016818.1 1252278 1253078 D PFAM: Integrase core domain; transposase 1252278..1253078 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790811 YP_005199234.1 CDS Rahaq2_1211 NC_016818.1 1253321 1254091 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family complement(1253321..1254091) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790812 YP_005199235.1 CDS Rahaq2_1212 NC_016818.1 1254157 1255875 R PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; putative regulator of cell autolysis complement(1254157..1255875) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790813 YP_005199236.1 CDS Rahaq2_1213 NC_016818.1 1255990 1256529 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 1255990..1256529 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790814 YP_005199237.1 CDS Rahaq2_1214 NC_016818.1 1256647 1257906 D PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 1256647..1257906 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793888 YP_005199238.1 CDS Rahaq2_1215 NC_016818.1 1257985 1259790 R hypothetical protein complement(1257985..1259790) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790815 YP_005199239.1 CDS Rahaq2_1216 NC_016818.1 1259978 1260436 D ketosteroid isomerase-like protein 1259978..1260436 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790816 YP_005199240.1 CDS Rahaq2_1217 NC_016818.1 1260504 1261337 R PFAM: Curli production assembly/transport component CsgG; hypothetical protein complement(1260504..1261337) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793889 YP_005199241.1 CDS Rahaq2_1218 NC_016818.1 1261370 1261795 R PFAM: Curli production assembly/transport component CsgF; curli production assembly/transport component CsgF complement(1261370..1261795) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790817 YP_005199242.1 CDS Rahaq2_1219 NC_016818.1 1261823 1262242 R PFAM: Curli assembly protein CsgE; curli assembly protein CsgE complement(1261823..1262242) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790818 YP_005199243.1 CDS Rahaq2_1220 NC_016818.1 1262223 1262873 R PFAM: Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain complement(1262223..1262873) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793890 YP_005199244.1 CDS Rahaq2_1221 NC_016818.1 1263746 1264234 D PFAM: Curlin associated repeat; curlin associated repeat-containing protein 1263746..1264234 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790819 YP_005199245.1 CDS Rahaq2_1222 NC_016818.1 1264274 1264750 D hypothetical protein 1264274..1264750 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790820 YP_005199246.1 CDS Rahaq2_1223 NC_016818.1 1264842 1265171 D PFAM: Thin aggregative fimbriae synthesis protein; Thin aggregative fimbriae synthesis protein 1264842..1265171 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790821 YP_005199247.1 CDS Rahaq2_1224 NC_016818.1 1265183 1266208 R PFAM: High-affinity nickel-transport protein; TIGRFAM: high-affinity nickel-transporter, HoxN/HupN/NixA family; high-affinity nickel-transporter, HoxN/HupN/NixA family complement(1265183..1266208) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790822 YP_005199248.1 CDS Rahaq2_1225 NC_016818.1 1266201 1268528 R PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF complement(1266201..1268528) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790823 YP_005199249.1 CDS Rahaq2_1226 NC_016818.1 1268700 1270871 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; formate dehydrogenase, alpha subunit, archaeal-type complement(1268700..1270871) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793891 YP_005199250.1 CDS Rahaq2_1227 NC_016818.1 1270894 1271439 R PFAM: 4Fe-4S binding domain; Fe-S-cluster-containing hydrogenase subunit complement(1270894..1271439) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790824 YP_005199251.1 CDS Rahaq2_1228 NC_016818.1 1271656 1272150 R PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; hydrogenase maturation protease HycI complement(1271656..1272150) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790825 YP_005199252.1 CDS Rahaq2_1229 NC_016818.1 1272143 1272625 R PFAM: Formate hydrogenlyase maturation protein HycH; Formate hydrogenlyase maturation protein HycH complement(1272143..1272625) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793892 YP_005199253.1 CDS Rahaq2_1230 NC_016818.1 1272619 1273419 R PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; Ni,Fe-hydrogenase III small subunit complement(1272619..1273419) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790826 YP_005199254.1 CDS Rahaq2_1231 NC_016818.1 1273416 1273973 R PFAM: 4Fe-4S binding domain; NADH:ubiquinone oxidoreductase chain I-like protein complement(1273416..1273973) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790827 YP_005199255.1 CDS Rahaq2_1232 NC_016818.1 1273987 1275711 R PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase; Ni,Fe-hydrogenase III large subunit complement(1273987..1275711) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793893 YP_005199256.1 CDS Rahaq2_1233 NC_016818.1 1275756 1276709 R PFAM: NADH dehydrogenase; formate hydrogenlyase subunit 4 complement(1275756..1276709) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790828 YP_005199257.1 CDS Rahaq2_1234 NC_016818.1 1276720 1278624 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit complement(1276720..1278624) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790829 YP_005199258.1 CDS Rahaq2_1235 NC_016818.1 1278621 1279250 R PFAM: 4Fe-4S binding domain; Fe-S-cluster-containing hydrogenase subunit complement(1278621..1279250) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790830 YP_005199259.1 CDS Rahaq2_1236 NC_016818.1 1279398 1279964 R PFAM: Transcriptional repressor of hyc and hyp operons; transcriptional repressor of hyc and hyp operons complement(1279398..1279964) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790831 YP_005199260.1 CDS Rahaq2_1237 NC_016818.1 1280227 1280571 D PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 1280227..1280571 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790832 YP_005199261.1 CDS Rahaq2_1238 NC_016818.1 1280602 1281411 D PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 1280602..1281411 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790833 YP_005199262.1 CDS Rahaq2_1239 NC_016818.1 1281402 1281680 D PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1281402..1281680 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790834 YP_005199263.1 CDS Rahaq2_1240 NC_016818.1 1281680 1282852 D PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 1281680..1282852 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790835 YP_005199264.1 CDS Rahaq2_1241 NC_016818.1 1282845 1283867 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 1282845..1283867 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793894 YP_005199265.1 CDS Rahaq2_1242 NC_016818.1 1283972 1286074 D PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 1283972..1286074 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790836 YP_005199266.1 CDS Rahaq2_1243 NC_016818.1 1286080 1286622 R hypothetical protein complement(1286080..1286622) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790837 YP_005199267.1 CDS Rahaq2_1244 NC_016818.1 1286622 1287026 R hypothetical protein complement(1286622..1287026) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790838 YP_005199268.1 CDS Rahaq2_1245 NC_016818.1 1287049 1287372 R PFAM: Carboxymuconolactone decarboxylase family; gamma-carboxymuconolactone decarboxylase subunit like protein complement(1287049..1287372) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790839 YP_005199269.1 CDS Rahaq2_1246 NC_016818.1 1287478 1288359 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 1287478..1288359 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790840 YP_005199270.1 CDS Rahaq2_1247 NC_016818.1 1288370 1288570 R PFAM: DNA polymerase III, theta subunit; DNA polymerase III subunit theta complement(1288370..1288570) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790841 YP_005199271.1 CDS Rahaq2_1248 NC_016818.1 1288613 1289617 R hypothetical protein complement(1288613..1289617) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790842 YP_005199272.1 CDS Rahaq2_1249 NC_016818.1 1289770 1290675 D PFAM: Dienelactone hydrolase family; dienelactone hydrolase-like enzyme 1289770..1290675 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790843 YP_005199273.1 CDS Rahaq2_1250 NC_016818.1 1290728 1291573 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase complement(1290728..1291573) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790844 YP_005199274.1 CDS Rahaq2_1251 NC_016818.1 1291665 1292726 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(1291665..1292726) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790845 YP_005199275.1 CDS Rahaq2_1252 NC_016818.1 1292987 1294162 D PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 1292987..1294162 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790846 YP_005199276.1 CDS Rahaq2_1253 NC_016818.1 1294165 1295232 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; putative dehydrogenase 1294165..1295232 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790847 YP_005199277.1 CDS Rahaq2_1254 NC_016818.1 1295246 1296268 D PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 1295246..1296268 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790848 YP_005199278.1 CDS Rahaq2_1255 NC_016818.1 1296309 1297847 D PFAM: Major Facilitator Superfamily; Na+/melibiose symporter-like transporter 1296309..1297847 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790849 YP_005199279.1 CDS Rahaq2_1256 NC_016818.1 1297891 1298418 R PFAM: Acetyltransferase (GNAT) family; sortase complement(1297891..1298418) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790850 YP_005199280.1 CDS Rahaq2_1257 NC_016818.1 1298652 1299470 D PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; lipoprotein 1298652..1299470 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790851 YP_005199281.1 CDS Rahaq2_1258 NC_016818.1 1299540 1299818 R PFAM: Protein of unknown function (DUF3761); manually curated; hypothetical protein complement(1299540..1299818) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790852 YP_005199282.1 CDS Rahaq2_1259 NC_016818.1 1300216 1301313 R hypothetical protein complement(1300216..1301313) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790853 YP_005199283.1 CDS Rahaq2_1260 NC_016818.1 1301393 1302277 R hypothetical protein complement(1301393..1302277) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790854 YP_005199284.1 CDS Rahaq2_1261 NC_016818.1 1302331 1302672 R hypothetical protein complement(1302331..1302672) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790855 YP_005199285.1 CDS Rahaq2_1262 NC_016818.1 1303137 1303886 R hypothetical protein complement(1303137..1303886) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790856 YP_005199286.1 CDS Rahaq2_1263 NC_016818.1 1304062 1304277 D hypothetical protein 1304062..1304277 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793895 YP_005199287.1 CDS Rahaq2_1265 NC_016818.1 1305115 1305282 R hypothetical protein complement(1305115..1305282) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790858 YP_005199288.1 CDS Rahaq2_1267 NC_016818.1 1305625 1306542 R PFAM: Formate/nitrite transporter; formate/nitrite transporter family protein complement(1305625..1306542) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790859 YP_005199289.1 CDS Rahaq2_1268 NC_016818.1 1306791 1307432 D PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA; heme ABC transporter ATP-binding protein CcmA 1306791..1307432 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790860 YP_005199290.1 CDS Rahaq2_1269 NC_016818.1 1307454 1308113 D PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB; heme exporter protein CcmB 1307454..1308113 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793897 YP_005199291.1 CDS Rahaq2_1270 NC_016818.1 1308519 1309256 D PFAM: Cytochrome C assembly protein; TIGRFAM: heme exporter protein CcmC; heme exporter protein CcmC 1308519..1309256 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790861 YP_005199292.1 CDS Rahaq2_1271 NC_016818.1 1309253 1309516 D PFAM: Heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; heme exporter protein CcmD 1309253..1309516 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790862 YP_005199293.1 CDS Rahaq2_1272 NC_016818.1 1309513 1310007 D PFAM: CcmE; cytochrome c-type biogenesis protein CcmE 1309513..1310007 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790863 YP_005199294.1 CDS Rahaq2_1273 NC_016818.1 1310004 1311977 D PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; c-type cytochrome biogenesis protein CcmF 1310004..1311977 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790864 YP_005199295.1 CDS Rahaq2_1274 NC_016818.1 1311974 1312525 D PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily; periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily 1311974..1312525 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790865 YP_005199296.1 CDS Rahaq2_1275 NC_016818.1 1312522 1313007 D PFAM: Cytochrome C biogenesis protein; c-type cytochromes biosynthesis protein 1312522..1313007 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790866 YP_005199297.1 CDS Rahaq2_1276 NC_016818.1 1313004 1314218 D TIGRFAM: cytochrome c-type biogenesis protein CcmI; cytochrome c-type biogenesis protein CcmI 1313004..1314218 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790867 YP_005199298.1 CDS Rahaq2_1277 NC_016818.1 1314253 1315020 D PFAM: VacJ like lipoprotein; surface lipoprotein 1314253..1315020 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790868 YP_005199299.1 CDS Rahaq2_1278 NC_016818.1 1315087 1316364 R PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); long-chain fatty acid transport protein complement(1315087..1316364) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790869 YP_005199300.1 CDS Rahaq2_1279 NC_016818.1 1316782 1317114 D PFAM: Protein of unknown function (DUF406); TIGRFAM: conserved hypothetical protein; hypothetical protein 1316782..1317114 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790870 YP_005199301.1 CDS Rahaq2_1280 NC_016818.1 1317325 1318638 D PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; fatty oxidation complex, beta subunit FadI; fatty oxidation complex, beta subunit FadI 1317325..1318638 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790871 YP_005199302.1 CDS Rahaq2_1281 NC_016818.1 1318635 1320839 D PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; TIGRFAM: fatty oxidation complex, alpha subunit FadJ; fatty oxidation complex, alpha subunit FadJ 1318635..1320839 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793898 YP_005199303.1 CDS Rahaq2_1282 NC_016818.1 1321255 1321743 D PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; phosphohistidine phosphatase SixA 1321255..1321743 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790872 YP_005199304.1 CDS Rahaq2_1283 NC_016818.1 1321822 1322361 R PFAM: Smr domain; hypothetical protein complement(1321822..1322361) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790873 YP_005199305.1 CDS Rahaq2_1284 NC_016818.1 1322565 1323497 D PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 1322565..1323497 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790874 YP_005199306.1 CDS Rahaq2_1285 NC_016818.1 1323575 1324660 D PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase 1323575..1324660 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790875 YP_005199307.1 CDS Rahaq2_1286 NC_016818.1 1324669 1325520 D PFAM: Penicillin-insensitive murein endopeptidase; murein endopeptidase 1324669..1325520 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790876 YP_005199308.1 CDS Rahaq2_1287 NC_016818.1 1325566 1326366 D PFAM: Sulfite exporter TauE/SafE; putative permease 1325566..1326366 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790877 YP_005199309.1 CDS Rahaq2_1288 NC_016818.1 1326465 1327022 D PFAM: Protein of unknown function, DUF462; hypothetical protein 1326465..1327022 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790878 YP_005199310.1 CDS Rahaq2_1289 NC_016818.1 1327047 1327325 D PFAM: YfcL protein; hypothetical protein 1327047..1327325 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790879 YP_005199311.1 CDS Rahaq2_1290 NC_016818.1 1327399 1329429 R PFAM: Protein of unknown function (DUF752); FAD dependent oxidoreductase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein complement(1327399..1329429) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790880 YP_005199312.1 CDS Rahaq2_1291 NC_016818.1 1329599 1330819 D PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase 1329599..1330819 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790881 YP_005199313.1 CDS Rahaq2_1292 NC_016818.1 1330979 1331458 D PFAM: Protein of unknown function (DUF2946); hypothetical protein 1330979..1331458 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790882 YP_005199314.1 CDS Rahaq2_1293 NC_016818.1 1331546 1333033 D PFAM: PepSY-associated TM helix; putative iron-regulated membrane protein 1331546..1333033 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793899 YP_005199315.1 CDS Rahaq2_1294 NC_016818.1 1333051 1334178 D PFAM: Citrate transporter; Na+/H+ antiporter NhaD-like permease 1333051..1334178 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790883 YP_005199316.1 CDS Rahaq2_1296 NC_016818.1 1334568 1335020 D PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase 1334568..1335020 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790885 YP_005199317.1 CDS Rahaq2_1297 NC_016818.1 1335039 1336088 R hypothetical protein complement(1335039..1336088) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790886 YP_005199318.1 CDS Rahaq2_1298 NC_016818.1 1336331 1337236 R PFAM: EamA-like transporter family; DMT(drug/metabolite transporter) superfamily permease complement(1336331..1337236) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790887 YP_005199319.1 CDS Rahaq2_1299 NC_016818.1 1337365 1338156 D PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 1337365..1338156 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790888 YP_005199320.1 CDS Rahaq2_1300 NC_016818.1 1338257 1339384 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Domain of unknown function (DUF3410); D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase-like oxidoreductase 1338257..1339384 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793900 YP_005199321.1 CDS Rahaq2_1301 NC_016818.1 1339500 1340510 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; aspartate-semialdehyde dehydrogenase 1339500..1340510 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790889 YP_005199322.1 CDS Rahaq2_1302 NC_016818.1 1340513 1341343 D PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; pseudouridylate synthase I 1340513..1341343 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790890 YP_005199323.1 CDS Rahaq2_1303 NC_016818.1 1341419 1342087 D PFAM: SNARE associated Golgi protein; putative membrane-associated protein 1341419..1342087 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790891 YP_005199324.1 CDS Rahaq2_1304 NC_016818.1 1342350 1343264 D PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1342350..1343264 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790892 YP_005199325.1 CDS Rahaq2_1305 NC_016818.1 1343453 1344739 D PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1343453..1344739 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790893 YP_005199326.1 CDS Rahaq2_1306 NC_016818.1 1344729 1345517 D PFAM: Sporulation related domain; hypothetical protein 1344729..1345517 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793901 YP_005199327.1 CDS Rahaq2_1307 NC_016818.1 1345866 1346357 D PFAM: Colicin V production protein; hypothetical protein 1345866..1346357 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790894 YP_005199328.1 CDS Rahaq2_1308 NC_016818.1 1346388 1347905 D PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase 1346388..1347905 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790895 YP_005199329.1 CDS Rahaq2_1309 NC_016818.1 1348036 1348608 D PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase 1348036..1348608 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790896 YP_005199330.1 CDS Rahaq2_1310 NC_016818.1 1348931 1349713 D PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; lysine-arginine-ornithine-binding periplasmic protein 1348931..1349713 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790897 YP_005199331.1 CDS Rahaq2_1311 NC_016818.1 1349821 1350507 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 1349821..1350507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790898 YP_005199332.1 CDS Rahaq2_1312 NC_016818.1 1350504 1351217 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 1350504..1351217 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793902 YP_005199333.1 CDS Rahaq2_1313 NC_016818.1 1351245 1352018 D PFAM: ABC transporter; ABC-type histidine transport system, ATPase component 1351245..1352018 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790899 YP_005199334.1 CDS Rahaq2_1314 NC_016818.1 1352088 1353320 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T; peptidase T complement(1352088..1353320) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790900 YP_005199335.1 CDS Rahaq2_1315 NC_016818.1 1353480 1355075 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 1353480..1355075 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790901 YP_005199336.1 CDS Rahaq2_1316 NC_016818.1 1355187 1356083 R PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; hypothetical protein complement(1355187..1356083) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790902 YP_005199337.1 CDS Rahaq2_1317 NC_016818.1 1356226 1356855 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase complement(1356226..1356855) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790903 YP_005199338.1 CDS Rahaq2_1318 NC_016818.1 1357173 1357805 D PFAM: NUDIX domain; isopentenyldiphosphate isomerase 1357173..1357805 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793903 YP_005199339.1 CDS Rahaq2_1319 NC_016818.1 1357844 1358860 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(1357844..1358860) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790904 YP_005199340.1 CDS Rahaq2_1320 NC_016818.1 1359214 1359657 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) 1359214..1359657 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790905 YP_005199341.1 CDS Rahaq2_1321 NC_016818.1 1359729 1360076 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; PTS system galactitol-specific transporter subunit IIB 1359729..1360076 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793904 YP_005199342.1 CDS Rahaq2_1322 NC_016818.1 1360127 1361503 D PFAM: PTS system sugar-specific permease component; hypothetical protein 1360127..1361503 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790906 YP_005199343.1 CDS Rahaq2_1323 NC_016818.1 1361608 1362441 D PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 1361608..1362441 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790907 YP_005199344.1 CDS Rahaq2_1324 NC_016818.1 1362434 1363387 D PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase 1362434..1363387 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790908 YP_005199345.1 CDS Rahaq2_1325 NC_016818.1 1363451 1365610 R PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; phosphate acetyltransferase complement(1363451..1365610) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790909 YP_005199346.1 CDS Rahaq2_1326 NC_016818.1 1365777 1366979 R PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase complement(1365777..1366979) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790910 YP_005199347.1 CDS Rahaq2_1327 NC_016818.1 1367500 1367955 D PFAM: Protein of unknown function, DUF412; hypothetical protein 1367500..1367955 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790911 YP_005199348.1 CDS Rahaq2_1328 NC_016818.1 1368151 1368645 D PFAM: YfbU domain; hypothetical protein 1368151..1368645 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790912 YP_005199349.1 CDS Rahaq2_1329 NC_016818.1 1368670 1369323 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein 1368670..1369323 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790913 YP_005199350.1 CDS Rahaq2_1330 NC_016818.1 1369443 1371275 D PFAM: Citrate transporter; TrkA-C domain; di-/tricarboxylate transporter 1369443..1371275 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790914 YP_005199351.1 CDS Rahaq2_1331 NC_016818.1 1371276 1371875 R PFAM: HD domain; putative HD superfamily hydrolase complement(1371276..1371875) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790915 YP_005199352.1 CDS Rahaq2_1332 NC_016818.1 1371993 1373207 R PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase complement(1371993..1373207) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790916 YP_005199353.1 CDS Rahaq2_1333 NC_016818.1 1374193 1375134 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 1374193..1375134 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790917 YP_005199354.1 CDS Rahaq2_1334 NC_016818.1 1375839 1376282 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH:ubiquinone oxidoreductase subunit 3 (chain A) 1375839..1376282 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790918 YP_005199355.1 CDS Rahaq2_1335 NC_016818.1 1376305 1376979 D PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-quinone oxidoreductase subunit B 1376305..1376979 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793905 YP_005199356.1 CDS Rahaq2_1336 NC_016818.1 1377042 1378868 D PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase I, D subunit; NADH/F420H2 dehydrogenase, subunit C 1377042..1378868 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790919 YP_005199357.1 CDS Rahaq2_1337 NC_016818.1 1378871 1379407 D PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH-quinone oxidoreductase subunit E 1378871..1379407 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790920 YP_005199358.1 CDS Rahaq2_1338 NC_016818.1 1379404 1380765 D PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit; NADH-quinone oxidoreductase subunit F 1379404..1380765 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790921 YP_005199359.1 CDS Rahaq2_1339 NC_016818.1 1380906 1383632 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G; NADH-quinone oxidoreductase subunit G 1380906..1383632 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790922 YP_005199360.1 CDS Rahaq2_1340 NC_016818.1 1383629 1384606 D PFAM: NADH dehydrogenase; NADH:ubiquinone oxidoreductase subunit 1 (chain H) 1383629..1384606 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790923 YP_005199361.1 CDS Rahaq2_1341 NC_016818.1 1384621 1385163 D PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-quinone oxidoreductase subunit I 1384621..1385163 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790924 YP_005199362.1 CDS Rahaq2_1342 NC_016818.1 1385176 1385736 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH:ubiquinone oxidoreductase subunit 6 (chain J) 1385176..1385736 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790925 YP_005199363.1 CDS Rahaq2_1343 NC_016818.1 1385733 1386035 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 1385733..1386035 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790926 YP_005199364.1 CDS Rahaq2_1344 NC_016818.1 1386032 1387879 D PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; proton-translocating NADH-quinone oxidoreductase subunit L 1386032..1387879 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790927 YP_005199365.1 CDS Rahaq2_1345 NC_016818.1 1387978 1389507 D PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit M 1387978..1389507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790928 YP_005199366.1 CDS Rahaq2_1346 NC_016818.1 1389514 1390974 D PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase, chain N 1389514..1390974 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790929 YP_005199367.1 CDS Rahaq2_1347 NC_016818.1 1391167 1391682 D PFAM: Protein of unknown function (DUF1097); hypothetical protein 1391167..1391682 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790930 YP_005199368.1 CDS Rahaq2_1348 NC_016818.1 1391795 1392103 D PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein 1391795..1392103 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793906 YP_005199369.1 CDS Rahaq2_1349 NC_016818.1 1392334 1393671 D PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases; isochorismate synthase family protein 1392334..1393671 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790931 YP_005199370.1 CDS Rahaq2_1350 NC_016818.1 1393697 1395370 D PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit B 1393697..1395370 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790932 YP_005199371.1 CDS Rahaq2_1351 NC_016818.1 1395331 1396164 D PFAM: alpha/beta hydrolase fold; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1395331..1396164 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790933 YP_005199372.1 CDS Rahaq2_1352 NC_016818.1 1396151 1397008 D PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase); dihydroxynaphthoate synthase 1396151..1397008 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790934 YP_005199373.1 CDS Rahaq2_1353 NC_016818.1 1397008 1398009 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoate synthase; o-succinylbenzoic acid synthetase 1397008..1398009 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790935 YP_005199374.1 CDS Rahaq2_1354 NC_016818.1 1397994 1399367 D PFAM: AMP-binding enzyme; TIGRFAM: O-succinylbenzoate-CoA ligase; o-succinylbenzoate--CoA ligase 1397994..1399367 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790936 YP_005199375.1 CDS Rahaq2_1355 NC_016818.1 1399435 1400868 R PFAM: Catalase; Catalase-related immune-responsive; catalase complement(1399435..1400868) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790937 YP_005199376.1 CDS Rahaq2_1356 NC_016818.1 1401191 1401736 D PFAM: YfaZ precursor; YfaZ precursor 1401191..1401736 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790938 YP_005199377.1 CDS Rahaq2_1357 NC_016818.1 1401863 1403068 D PFAM: Probable molybdopterin binding domain; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA-like protein 1401863..1403068 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790939 YP_005199378.1 CDS Rahaq2_1358 NC_016818.1 1403221 1404021 R PFAM: Integrase core domain; transposase complement(1403221..1404021) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790940 YP_005199379.1 CDS Rahaq2_1359 NC_016818.1 1404048 1404554 R hypothetical protein complement(1404048..1404554) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790941 YP_005199380.1 CDS Rahaq2_1360 NC_016818.1 1404626 1404886 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; ferredoxin complement(1404626..1404886) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790942 YP_005199381.1 CDS Rahaq2_1361 NC_016818.1 1404887 1406017 R PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase subunit beta complement(1404887..1406017) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790943 YP_005199382.1 CDS Rahaq2_1362 NC_016818.1 1406097 1408379 R PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleoside-diphosphate reductase subunit alpha complement(1406097..1408379) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790944 YP_005199383.1 CDS Rahaq2_1363 NC_016818.1 1409088 1412828 D PFAM: Autotransporter beta-domain; Chlamydia polymorphic membrane protein (Chlamydia_PMP); TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat; Chlamydial polymorphic outer membrane protein repeat; outer membrane autotransporter barrel domain-containing protein 1409088..1412828 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790945 YP_005199384.1 CDS Rahaq2_1364 NC_016818.1 1412897 1413619 R PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; ubiquinone biosynthesis O-methyltransferase complement(1412897..1413619) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790946 YP_005199385.1 CDS Rahaq2_1365 NC_016818.1 1413879 1416530 D PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A 1413879..1416530 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793907 YP_005199386.1 CDS Rahaq2_1366 NC_016818.1 1416707 1419562 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; RcsC Alpha-Beta-Loop (ABL); manually curated; signal transduction histidine kinase 1416707..1419562 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790947 YP_005199387.1 CDS Rahaq2_1367 NC_016818.1 1419837 1420484 D hypothetical protein 1419837..1420484 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793908 YP_005199388.1 CDS Rahaq2_1368 NC_016818.1 1420543 1421193 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain complement(1420543..1421193) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790948 YP_005199389.1 CDS Rahaq2_1369 NC_016818.1 1421198 1423891 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; signal transduction histidine kinase complement(1421198..1423891) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790949 YP_005199390.1 CDS Rahaq2_1371 NC_016818.1 1424696 1438483 D hypothetical protein 1424696..1438483 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790950 YP_005199391.1 CDS Rahaq2_1372 NC_016818.1 1438560 1439936 D PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 1438560..1439936 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790951 YP_005199392.1 CDS Rahaq2_1373 NC_016818.1 1439951 1442164 D PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ATPase, LssB family; type I secretion system ATPase, LssB family 1439951..1442164 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790952 YP_005199393.1 CDS Rahaq2_1374 NC_016818.1 1442182 1443351 D PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; multidrug resistance efflux pump 1442182..1443351 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790953 YP_005199394.1 CDS Rahaq2_1375 NC_016818.1 1443796 1445784 R PFAM: Sel1 repeat; Sel1 repeat protein complement(1443796..1445784) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790954 YP_005199395.1 CDS Rahaq2_1376 NC_016818.1 1446560 1447687 D PFAM: Gram-negative porin; outer membrane protein (porin) 1446560..1447687 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790955 YP_005199396.1 CDS Rahaq2_1377 NC_016818.1 1447800 1448186 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(1447800..1448186) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790956 YP_005199397.1 CDS Rahaq2_1378 NC_016818.1 1448715 1450487 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI/penicillin-binding protein 2 complement(1448715..1450487) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790957 YP_005199398.1 CDS Rahaq2_1379 NC_016818.1 1450708 1450950 R PFAM: DinI-like family; DinI-like family complement(1450708..1450950) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793910 YP_005199399.1 CDS Rahaq2_1380 NC_016818.1 1451144 1452925 R PFAM: Sulfatase; Domain of unknown function (DUF3413); putative hydrolase of alkaline phosphatase superfamily complement(1451144..1452925) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790958 YP_005199400.1 CDS Rahaq2_1381 NC_016818.1 1452950 1453177 R PFAM: Protein of unknown function (DUF1414); hypothetical protein complement(1452950..1453177) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790959 YP_005199401.1 CDS Rahaq2_1382 NC_016818.1 1453356 1454360 D PFAM: 37-kD nucleoid-associated bacterial protein; nucleoid-associated protein 1453356..1454360 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790960 YP_005199402.1 CDS Rahaq2_1383 NC_016818.1 1454484 1454975 R PFAM: Ribosomal L25p family; ribosomal protein L25 (general stress protein Ctc) complement(1454484..1454975) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790961 YP_005199403.1 CDS Rahaq2_1384 NC_016818.1 1454935 1456698 R PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; DNA/RNA helicase complement(1454935..1456698) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793911 YP_005199404.1 CDS Rahaq2_1385 NC_016818.1 1457031 1457738 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein 1457031..1457738 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790962 YP_005199405.1 CDS Rahaq2_1386 NC_016818.1 1457765 1458964 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; Bcr/CflA family multidrug resistance transporter 1457765..1458964 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790963 YP_005199406.1 CDS Rahaq2_1387 NC_016818.1 1459111 1459617 D hypothetical protein 1459111..1459617 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790964 YP_005199407.1 CDS Rahaq2_1388 NC_016818.1 1459644 1460444 D PFAM: Integrase core domain; transposase 1459644..1460444 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790965 YP_005199408.1 CDS Rahaq2_1389 NC_016818.1 1460513 1461865 R PFAM: Major Facilitator Superfamily; sugar phosphate permease complement(1460513..1461865) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793912 YP_005199409.1 CDS Rahaq2_1390 NC_016818.1 1462040 1463023 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(1462040..1463023) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790966 YP_005199410.1 CDS Rahaq2_1391 NC_016818.1 1463229 1463993 D PFAM: short chain dehydrogenase; dehydrogenase 1463229..1463993 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790967 YP_005199411.1 CDS Rahaq2_1392 NC_016818.1 1464005 1464760 D PFAM: short chain dehydrogenase; short-chain alcohol dehydrogenase 1464005..1464760 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790968 YP_005199412.1 CDS Rahaq2_1393 NC_016818.1 1464821 1466224 R PFAM: Cytochrome c; cytochrome c, mono- and diheme variants family complement(1464821..1466224) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790969 YP_005199413.1 CDS Rahaq2_1394 NC_016818.1 1466221 1467876 R PFAM: GMC oxidoreductase; FAD dependent oxidoreductase; choline dehydrogenase-like flavoprotein complement(1466221..1467876) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790970 YP_005199414.1 CDS Rahaq2_1395 NC_016818.1 1467876 1468493 R PFAM: Membrane bound FAD containing D-sorbitol dehydrogenase; Membrane bound FAD containing D-sorbitol dehydrogenase complement(1467876..1468493) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790971 YP_005199415.1 CDS Rahaq2_1396 NC_016818.1 1469169 1469513 D hypothetical protein 1469169..1469513 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790972 YP_005199416.1 CDS Rahaq2_1397 NC_016818.1 1469557 1471164 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter ATPase complement(1469557..1471164) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790973 YP_005199417.1 CDS Rahaq2_1398 NC_016818.1 1471166 1472215 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC transporter permease complement(1471166..1472215) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790974 YP_005199418.1 CDS Rahaq2_1399 NC_016818.1 1472215 1473309 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC transporter permease complement(1472215..1473309) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793913 YP_005199419.1 CDS Rahaq2_1400 NC_016818.1 1473320 1475125 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein complement(1473320..1475125) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790975 YP_005199420.1 CDS Rahaq2_1401 NC_016818.1 1475320 1476903 R PFAM: EAL domain; EAL domain-containing protein complement(1475320..1476903) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790976 YP_005199421.1 CDS Rahaq2_1402 NC_016818.1 1477069 1477644 R PFAM: NlpC/P60 family; cell wall-associated hydrolase complement(1477069..1477644) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790977 YP_005199422.1 CDS Rahaq2_1403 NC_016818.1 1478073 1478786 R PFAM: PAP2 superfamily; membrane-associated phospholipid phosphatase complement(1478073..1478786) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790978 YP_005199423.1 CDS Rahaq2_1404 NC_016818.1 1478847 1479821 R PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; putative GTPase, G3E family complement(1478847..1479821) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793914 YP_005199424.1 CDS Rahaq2_1405 NC_016818.1 1480037 1480348 D hypothetical protein 1480037..1480348 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790979 YP_005199425.1 CDS Rahaq2_1406 NC_016818.1 1480377 1481327 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 1480377..1481327 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790980 YP_005199426.1 CDS Rahaq2_1407 NC_016818.1 1481388 1482857 R PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; mannitol-1-phosphate/altronate dehydrogenase complement(1481388..1482857) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790981 YP_005199427.1 CDS Rahaq2_1408 NC_016818.1 1483128 1483700 R PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; elongation factor P-like protein YeiP; elongation factor P-like protein YeiP complement(1483128..1483700) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790982 YP_005199428.1 CDS Rahaq2_1409 NC_016818.1 1483945 1484199 D PFAM: Uncharacterised protein family (UPF0153); putative Fe-S oxidoreductase 1483945..1484199 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793915 YP_005199429.1 CDS Rahaq2_1410 NC_016818.1 1484196 1485410 R PFAM: Major Facilitator Superfamily; TIGRFAM: sugar efflux transporter; sugar efflux transporter complement(1484196..1485410) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790983 YP_005199430.1 CDS Rahaq2_1411 NC_016818.1 1485874 1487004 D PFAM: PTS HPr component phosphorylation site; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system HPr (HPr) family protein 1485874..1487004 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790984 YP_005199431.1 CDS Rahaq2_1412 NC_016818.1 1487001 1487936 D PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family; 1-phosphofructokinase 1487001..1487936 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790985 YP_005199432.1 CDS Rahaq2_1413 NC_016818.1 1487952 1489652 D PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component; PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 1487952..1489652 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790986 YP_005199433.1 CDS Rahaq2_1414 NC_016818.1 1489883 1490749 R PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1); apurinic endonuclease APN1 complement(1489883..1490749) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790987 YP_005199434.1 CDS Rahaq2_1415 NC_016818.1 1490840 1491946 R PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein complement(1490840..1491946) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790988 YP_005199435.1 CDS Rahaq2_1416 NC_016818.1 1492135 1493007 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 1492135..1493007 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790989 YP_005199436.1 CDS Rahaq2_1417 NC_016818.1 1493139 1494614 D PFAM: Amino acid permease; amino acid transporter 1493139..1494614 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790990 YP_005199437.1 CDS Rahaq2_1418 NC_016818.1 1494848 1495930 D PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 1494848..1495930 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790991 YP_005199438.1 CDS Rahaq2_1419 NC_016818.1 1495930 1496766 D PFAM: ABC transporter; cobalamin/Fe3+-siderophore ABC transporter ATPase 1495930..1496766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790992 YP_005199439.1 CDS Rahaq2_1420 NC_016818.1 1496960 1497766 R PFAM: HAD superfamily, subfamily IIIB (Acid phosphatase); TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; 5'-nucleotidase complement(1496960..1497766) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790993 YP_005199440.1 CDS Rahaq2_1421 NC_016818.1 1497969 1499078 R PFAM: Gram-negative porin; outer membrane protein (porin) complement(1497969..1499078) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790994 YP_005199441.1 CDS Rahaq2_1422 NC_016818.1 1499403 1501577 D PFAM: DEAD_2; DEAD/DEAH box helicase; DNA helicase, Rad3 1499403..1501577 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790995 YP_005199442.1 CDS Rahaq2_1423 NC_016818.1 1501623 1502585 D PFAM: Glycosyl transferase family, helical bundle domain; anthranilate phosphoribosyltransferase 1501623..1502585 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790996 YP_005199443.1 CDS Rahaq2_1424 NC_016818.1 1502806 1503147 D PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein PhnA 1502806..1503147 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793916 YP_005199444.1 CDS Rahaq2_1425 NC_016818.1 1503260 1505122 D PFAM: Peptidase family M3; oligoendopeptidase F 1503260..1505122 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790997 YP_005199445.1 CDS Rahaq2_1426 NC_016818.1 1505209 1505838 R PFAM: Flavin reductase like domain; hypothetical protein complement(1505209..1505838) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790998 YP_005199446.1 CDS Rahaq2_1427 NC_016818.1 1506045 1507013 D PFAM: Protein of unknown function (DUF890); putative SAM-dependent methyltransferase 1506045..1507013 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790999 YP_005199447.1 CDS Rahaq2_1428 NC_016818.1 1507471 1507710 R hypothetical protein complement(1507471..1507710) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791000 YP_005199448.1 CDS Rahaq2_1429 NC_016818.1 1508468 1509190 R PFAM: ABC transporter; polar amino acid ABC transporter ATPase complement(1508468..1509190) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793917 YP_005199449.1 CDS Rahaq2_1430 NC_016818.1 1509187 1509846 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease complement(1509187..1509846) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791001 YP_005199450.1 CDS Rahaq2_1431 NC_016818.1 1509954 1510697 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; periplasmic component of amino acid ABC-type transporter/signal transduction system complement(1509954..1510697) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791002 YP_005199451.1 CDS Rahaq2_1432 NC_016818.1 1511098 1511364 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; DnaK suppressor protein complement(1511098..1511364) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791003 YP_005199452.1 CDS Rahaq2_1433 NC_016818.1 1511491 1511994 R PFAM: Ferritin-like domain; DNA-binding ferritin-like protein complement(1511491..1511994) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791004 YP_005199453.1 CDS Rahaq2_1434 NC_016818.1 1512407 1513084 R PFAM: Anti-sigma-K factor rskA; hypothetical protein complement(1512407..1513084) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791005 YP_005199454.1 CDS Rahaq2_1435 NC_016818.1 1513081 1513662 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(1513081..1513662) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791006 YP_005199455.1 CDS Rahaq2_1436 NC_016818.1 1513727 1514290 R PFAM: Fasciclin domain; secreted/surface protein with fasciclin-like repeats complement(1513727..1514290) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791007 YP_005199456.1 CDS Rahaq2_1437 NC_016818.1 1514480 1515466 R PFAM: EamA-like transporter family; putative permease, DMT superfamily complement(1514480..1515466) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791008 YP_005199457.1 CDS Rahaq2_1438 NC_016818.1 1515864 1516397 D PFAM: Enterobacterial Ail/Lom protein; opacity protein 1515864..1516397 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791009 YP_005199458.1 CDS Rahaq2_1439 NC_016818.1 1516492 1517256 R PFAM: Oxidoreductase molybdopterin binding domain; sulfite oxidase-like oxidoreductase complement(1516492..1517256) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791010 YP_005199459.1 CDS Rahaq2_1440 NC_016818.1 1517249 1517890 R PFAM: Cytochrome b(N-terminal)/b6/petB; thiosulfate reductase cytochrome B subunit (membrane anchoring protein) complement(1517249..1517890) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791011 YP_005199460.1 CDS Rahaq2_1441 NC_016818.1 1517917 1518540 R hypothetical protein complement(1517917..1518540) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791012 YP_005199461.1 CDS Rahaq2_1442 NC_016818.1 1518754 1519428 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator; heavy metal response regulator 1518754..1519428 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791013 YP_005199462.1 CDS Rahaq2_1443 NC_016818.1 1519421 1520857 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase; heavy metal sensor kinase 1519421..1520857 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791014 YP_005199463.1 CDS Rahaq2_1444 NC_016818.1 1521079 1522755 D PFAM: Sulfatase; Domain of unknown function (DUF1705); putative membrane-associated, metal-dependent hydrolase 1521079..1522755 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793918 YP_005199464.1 CDS Rahaq2_1445 NC_016818.1 1522896 1524008 D hypothetical protein 1522896..1524008 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791015 YP_005199465.1 CDS Rahaq2_1446 NC_016818.1 1524134 1526188 R PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; choline/carnitine/betaine transport complement(1524134..1526188) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791016 YP_005199466.1 CDS Rahaq2_1447 NC_016818.1 1526424 1527023 D PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: transcriptional repressor BetI; transcriptional repressor BetI 1526424..1527023 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791017 YP_005199467.1 CDS Rahaq2_1448 NC_016818.1 1527068 1528537 D PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase; glycine betaine aldehyde dehydrogenase 1527068..1528537 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791018 YP_005199468.1 CDS Rahaq2_1449 NC_016818.1 1528561 1530246 D PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase; choline dehydrogenase 1528561..1530246 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791019 YP_005199469.1 CDS Rahaq2_1450 NC_016818.1 1530335 1530793 D PFAM: Acetyltransferase (GNAT) family; putative acyltransferase 1530335..1530793 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791020 YP_005199470.1 CDS Rahaq2_1451 NC_016818.1 1531091 1532020 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(1531091..1532020) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791021 YP_005199471.1 CDS Rahaq2_1452 NC_016818.1 1532122 1532556 D PFAM: Protein of unknown function, DUF606; hypothetical protein 1532122..1532556 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791022 YP_005199472.1 CDS Rahaq2_1453 NC_016818.1 1532560 1533012 D PFAM: Protein of unknown function, DUF606; hypothetical protein 1532560..1533012 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791023 YP_005199473.1 CDS Rahaq2_1454 NC_016818.1 1533040 1533498 R PFAM: RES domain; hypothetical protein complement(1533040..1533498) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791024 YP_005199474.1 CDS Rahaq2_1455 NC_016818.1 1533495 1533956 R PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family; putative toxin-antitoxin system antitoxin component complement(1533495..1533956) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793919 YP_005199475.1 CDS Rahaq2_1456 NC_016818.1 1534341 1535195 D PFAM: Nucleoside-specific channel-forming protein, Tsx; nucleoside-binding outer membrane protein 1534341..1535195 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793920 YP_005199476.1 CDS Rahaq2_1457 NC_016818.1 1535381 1536973 D PFAM: ABC transporter; ABC transporter ATPase 1535381..1536973 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791025 YP_005199477.1 CDS Rahaq2_1458 NC_016818.1 1537154 1537915 R PFAM: MoeZ/MoeB domain; ThiF family; TIGRFAM: molybdopterin synthase sulfurylase MoeB; molybdopterin synthase sulfurylase MoeB complement(1537154..1537915) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791026 YP_005199478.1 CDS Rahaq2_1459 NC_016818.1 1537918 1539159 R PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein complement(1537918..1539159) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791027 YP_005199479.1 CDS Rahaq2_1460 NC_016818.1 1539405 1539638 D PFAM: DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator 1539405..1539638 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791028 YP_005199480.1 CDS Rahaq2_1461 NC_016818.1 1539708 1540907 R PFAM: Major Facilitator Superfamily; major facilitator superfamily transporter complement(1539708..1540907) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793921 YP_005199481.1 CDS Rahaq2_1462 NC_016818.1 1541185 1542198 D PFAM: Asparaginase; asparaginase 1541185..1542198 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791029 YP_005199482.1 CDS Rahaq2_1463 NC_016818.1 1542195 1544051 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain 1542195..1544051 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791030 YP_005199483.1 CDS Rahaq2_1464 NC_016818.1 1544124 1545680 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 1544124..1545680 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791031 YP_005199484.1 CDS Rahaq2_1465 NC_016818.1 1545791 1546711 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 1545791..1546711 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791032 YP_005199485.1 CDS Rahaq2_1466 NC_016818.1 1546720 1547640 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 1546720..1547640 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791033 YP_005199486.1 CDS Rahaq2_1467 NC_016818.1 1547807 1548664 R PFAM: Putative esterase; TIGRFAM: S-formylglutathione hydrolase; S-formylglutathione hydrolase complement(1547807..1548664) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793922 YP_005199487.1 CDS Rahaq2_1468 NC_016818.1 1548676 1549800 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(1548676..1549800) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793923 YP_005199488.1 CDS Rahaq2_1469 NC_016818.1 1549845 1550774 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(1549845..1550774) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791034 YP_005199489.1 CDS Rahaq2_1470 NC_016818.1 1550974 1552101 D PFAM: Protein of unknown function (DUF1228); hypothetical protein 1550974..1552101 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791035 YP_005199490.1 CDS Rahaq2_1471 NC_016818.1 1552227 1552892 D PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase I 1552227..1552892 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791036 YP_005199491.1 CDS Rahaq2_1472 NC_016818.1 1553140 1554294 D PFAM: Protein of unknown function (DUF418); hypothetical protein 1553140..1554294 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791037 YP_005199492.1 CDS Rahaq2_1473 NC_016818.1 1554462 1554581 D hypothetical protein 1554462..1554581 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793924 YP_005199493.1 CDS Rahaq2_1474 NC_016818.1 1554565 1555596 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 1554565..1555596 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791038 YP_005199494.1 CDS Rahaq2_1475 NC_016818.1 1555847 1556845 D PFAM: family; sugar ABC transporter periplasmic protein 1555847..1556845 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791039 YP_005199495.1 CDS Rahaq2_1476 NC_016818.1 1557072 1558604 D PFAM: ABC transporter; sugar ABC transporter ATPase 1557072..1558604 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791040 YP_005199496.1 CDS Rahaq2_1477 NC_016818.1 1558623 1559633 D PFAM: Branched-chain amino acid transport system / permease component; ABC-type glucose/galactose transport system, permease component 1558623..1559633 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791041 YP_005199497.1 CDS Rahaq2_1478 NC_016818.1 1559787 1560710 R PFAM: DUF218 domain; membrane protein complement(1559787..1560710) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791042 YP_005199498.1 CDS Rahaq2_1479 NC_016818.1 1560937 1562634 R PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malic enzyme complement(1560937..1562634) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791043 YP_005199499.1 CDS Rahaq2_1480 NC_016818.1 1562792 1563682 R PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homodimeric; cytidine deaminase, homodimeric complement(1562792..1563682) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791044 YP_005199500.1 CDS Rahaq2_1481 NC_016818.1 1563850 1564584 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; lysine-arginine-ornithine-binding periplasmic protein complement(1563850..1564584) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793925 YP_005199501.1 CDS Rahaq2_1482 NC_016818.1 1564807 1565478 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease complement(1564807..1565478) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793926 YP_005199502.1 CDS Rahaq2_1483 NC_016818.1 1565478 1566194 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease complement(1565478..1566194) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791045 YP_005199503.1 CDS Rahaq2_1484 NC_016818.1 1566207 1566938 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; lysine-arginine-ornithine-binding periplasmic protein complement(1566207..1566938) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791046 YP_005199504.1 CDS Rahaq2_1485 NC_016818.1 1566986 1567765 R PFAM: ABC transporter; ABC-type arginine transport system, ATPase component complement(1566986..1567765) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791047 YP_005199505.1 CDS Rahaq2_1486 NC_016818.1 1567925 1568506 R hypothetical protein complement(1567925..1568506) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791048 YP_005199506.1 CDS Rahaq2_1487 NC_016818.1 1568695 1569021 D PFAM: Domain of unknown function (DUF74); hypothetical protein 1568695..1569021 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793927 YP_005199507.1 CDS Rahaq2_1488 NC_016818.1 1569018 1569866 D PFAM: N-acetylmuramoyl-L-alanine amidase; negative regulator of beta-lactamase expression 1569018..1569866 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791049 YP_005199508.1 CDS Rahaq2_1489 NC_016818.1 1569889 1570923 R PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase complement(1569889..1570923) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791050 YP_005199509.1 CDS Rahaq2_1490 NC_016818.1 1571080 1572534 R PFAM: NAD dependent epimerase/dehydratase family; Protein of unknown function (DUF2867); putative nucleoside-diphosphate sugar epimerase complement(1571080..1572534) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791051 YP_005199510.1 CDS Rahaq2_1491 NC_016818.1 1572616 1573629 R PFAM: Beta-eliminating lyase; threonine aldolase complement(1572616..1573629) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791052 YP_005199511.1 CDS Rahaq2_1492 NC_016818.1 1573731 1575455 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate-dependent protein complement(1573731..1575455) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791053 YP_005199512.1 CDS Rahaq2_1493 NC_016818.1 1575635 1576648 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; flavodoxin reductase family protein complement(1575635..1576648) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791054 YP_005199513.1 CDS Rahaq2_1494 NC_016818.1 1576655 1578307 R PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase; hydroxylamine reductase complement(1576655..1578307) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791055 YP_005199514.1 CDS Rahaq2_1495 NC_016818.1 1578472 1579371 R PFAM: Membrane protein of unknown function (DUF340); hypothetical protein complement(1578472..1579371) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791056 YP_005199515.1 CDS Rahaq2_1496 NC_016818.1 1579561 1581294 D PFAM: Protein of unknown function (DUF2813); putative OLD family ATP-dependent endonuclease 1579561..1581294 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791057 YP_005199516.1 CDS Rahaq2_1497 NC_016818.1 1581291 1582280 R PFAM: Protein of unknown function (DUF535); hypothetical protein complement(1581291..1582280) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791058 YP_005199517.1 CDS Rahaq2_1498 NC_016818.1 1582573 1582794 R PFAM: 'Cold-shock' DNA-binding domain; TIGRFAM: cold shock domain protein CspD; cold shock domain-containing protein CspD complement(1582573..1582794) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791059 YP_005199518.1 CDS Rahaq2_1499 NC_016818.1 1583188 1583508 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; hypothetical protein 1583188..1583508 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793928 YP_005199519.1 CDS Rahaq2_1500 NC_016818.1 1583536 1585818 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit clpA 1583536..1585818 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791060 YP_005199520.1 CDS Rahaq2_1501 NC_016818.1 1586039 1586257 R PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor IF-1 complement(1586039..1586257) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791061 YP_005199521.1 CDS Rahaq2_1502 NC_016818.1 1586351 1587085 R PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase complement(1586351..1587085) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791062 YP_005199522.1 CDS Rahaq2_1503 NC_016818.1 1587137 1588858 R PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: thiol reductant ABC exporter, CydC subunit; cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC complement(1587137..1588858) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791063 YP_005199523.1 CDS Rahaq2_1504 NC_016818.1 1588861 1590627 R PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: thiol reductant ABC exporter, CydD subunit; cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD complement(1588861..1590627) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791064 YP_005199524.1 CDS Rahaq2_1505 NC_016818.1 1590757 1591725 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin-disulfide reductase complement(1590757..1591725) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791065 YP_005199525.1 CDS Rahaq2_1506 NC_016818.1 1592457 1592951 D PFAM: AsnC family; transcriptional regulator 1592457..1592951 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791066 YP_005199526.1 CDS Rahaq2_1507 NC_016818.1 1593072 1596542 D PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; DNA segregation ATPase FtsK 1593072..1596542 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791067 YP_005199527.1 CDS Rahaq2_1508 NC_016818.1 1596739 1597350 D PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; periplasmic chaperone LolA 1596739..1597350 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791068 YP_005199528.1 CDS Rahaq2_1509 NC_016818.1 1597358 1598701 D PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); AAA ATPase 1597358..1598701 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791069 YP_005199529.1 CDS Rahaq2_1510 NC_016818.1 1598809 1600101 D PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 1598809..1600101 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791070 YP_005199530.1 CDS Rahaq2_1511 NC_016818.1 1600301 1602757 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; anaerobic dimethyl sulfoxide reductase subunit A 1600301..1602757 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791071 YP_005199531.1 CDS Rahaq2_1512 NC_016818.1 1602840 1605287 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence; anaerobic dimethyl sulfoxide reductase subunit A 1602840..1605287 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791072 YP_005199532.1 CDS Rahaq2_1513 NC_016818.1 1605299 1605916 D PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit; DMSO reductase, iron-sulfur subunit 1605299..1605916 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791073 YP_005199533.1 CDS Rahaq2_1514 NC_016818.1 1605918 1606775 D PFAM: DMSO reductase anchor subunit (DmsC); DMSO reductase anchor subunit 1605918..1606775 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791074 YP_005199534.1 CDS Rahaq2_1515 NC_016818.1 1606845 1607453 D PFAM: Nitrate reductase delta subunit; putative component of anaerobic dehydrogenase 1606845..1607453 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791075 YP_005199535.1 CDS Rahaq2_1516 NC_016818.1 1607453 1608025 D TIGRFAM: ferredoxin-type protein NapF; ferredoxin-type protein NapF 1607453..1608025 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791076 YP_005199536.1 CDS Rahaq2_1517 NC_016818.1 1608159 1609304 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 1608159..1609304 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791077 YP_005199537.1 CDS Rahaq2_1518 NC_016818.1 1609387 1610184 R PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase activating enzyme complement(1609387..1610184) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791078 YP_005199538.1 CDS Rahaq2_1519 NC_016818.1 1610225 1611211 R PFAM: Phage integrase family; site-specific recombinase XerD complement(1610225..1611211) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791079 YP_005199539.1 CDS Rahaq2_1520 NC_016818.1 1611314 1611613 R hypothetical protein complement(1611314..1611613) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791080 YP_005199540.1 CDS Rahaq2_1521 NC_016818.1 1611714 1612085 D PFAM: Regulatory phage protein cox; Regulatory phage protein cox 1611714..1612085 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791081 YP_005199541.1 CDS Rahaq2_1522 NC_016818.1 1612100 1612267 D hypothetical protein 1612100..1612267 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793929 YP_005199542.1 CDS Rahaq2_1523 NC_016818.1 1612264 1612764 D hypothetical protein 1612264..1612764 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791082 YP_005199543.1 CDS Rahaq2_1524 NC_016818.1 1612824 1613066 D PFAM: Protein of unknown function (DUF2732); hypothetical protein 1612824..1613066 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791083 YP_005199544.1 CDS Rahaq2_1525 NC_016818.1 1613066 1613284 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 1613066..1613284 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793930 YP_005199545.1 CDS Rahaq2_1526 NC_016818.1 1613287 1613565 D hypothetical protein 1613287..1613565 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791084 YP_005199546.1 CDS Rahaq2_1527 NC_016818.1 1613573 1615870 D PFAM: Bacteriophage replication gene A protein (GPA); Bacteriophage replication gene A protein (GPA) 1613573..1615870 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791085 YP_005199547.1 CDS Rahaq2_1528 NC_016818.1 1615836 1616822 R PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; putative Rossmann fold nucleotide-binding protein involved in DNA uptake complement(1615836..1616822) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791086 YP_005199548.1 CDS Rahaq2_1529 NC_016818.1 1616819 1618276 R PFAM: Phosphoribosyl transferase domain; Topoisomerase DNA binding C4 zinc finger; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein complement(1616819..1618276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793931 YP_005199549.1 CDS Rahaq2_1530 NC_016818.1 1618907 1619635 D hypothetical protein 1618907..1619635 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791087 YP_005199550.1 CDS Rahaq2_1531 NC_016818.1 1619740 1620753 R PFAM: Phage portal protein; TIGRFAM: phage portal protein, PBSX family; phage portal protein, PBSX family complement(1619740..1620753) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791088 YP_005199551.1 CDS Rahaq2_1533 NC_016818.1 1622689 1623534 D PFAM: Phage capsid scaffolding protein (GPO) serine peptidase; Phage capsid scaffolding protein (GPO) serine peptidase 1622689..1623534 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791090 YP_005199552.1 CDS Rahaq2_1534 NC_016818.1 1623578 1624678 D PFAM: Phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; phage major capsid protein, P2 family 1623578..1624678 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791091 YP_005199553.1 CDS Rahaq2_1535 NC_016818.1 1624681 1625430 D PFAM: Phage small terminase subunit; Phage small terminase subunit 1624681..1625430 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791092 YP_005199554.1 CDS Rahaq2_1536 NC_016818.1 1625526 1626020 D PFAM: Phage head completion protein (GPL); Phage head completion protein (GPL) 1625526..1626020 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793932 YP_005199555.1 CDS Rahaq2_1537 NC_016818.1 1626020 1626223 D PFAM: Phage Tail Protein X; P2-like prophage tail protein X 1626020..1626223 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791093 YP_005199556.1 CDS Rahaq2_1538 NC_016818.1 1626226 1626435 D hypothetical protein 1626226..1626435 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791094 YP_005199557.1 CDS Rahaq2_1539 NC_016818.1 1626419 1626928 D PFAM: Phage lysozyme; phage-related lysozyme (muraminidase) 1626419..1626928 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791095 YP_005199558.1 CDS Rahaq2_1540 NC_016818.1 1626925 1627347 D TIGRFAM: phage lysis regulatory protein, LysB family; phage lysis regulatory protein, LysB family 1626925..1627347 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791096 YP_005199559.1 CDS Rahaq2_1541 NC_016818.1 1627437 1627904 D PFAM: P2 phage tail completion protein R (GpR); P2 phage tail completion protein R (GpR) 1627437..1627904 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791097 YP_005199560.1 CDS Rahaq2_1542 NC_016818.1 1627897 1628355 D PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein; phage virion morphogenesis protein, putative tail completion 1627897..1628355 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793933 YP_005199561.1 CDS Rahaq2_1543 NC_016818.1 1628443 1629072 D hypothetical protein 1628443..1629072 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791098 YP_005199562.1 CDS Rahaq2_1544 NC_016818.1 1629181 1629861 D PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V; phage baseplate assembly protein V 1629181..1629861 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791099 YP_005199563.1 CDS Rahaq2_1545 NC_016818.1 1629879 1630229 D PFAM: Gene 25-like lysozyme; phage baseplate assembly protein W 1629879..1630229 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791100 YP_005199564.1 CDS Rahaq2_1546 NC_016818.1 1630234 1631142 D PFAM: Baseplate J-like protein; phage-related baseplate assembly protein 1630234..1631142 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791101 YP_005199565.1 CDS Rahaq2_1547 NC_016818.1 1631135 1631665 D PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein, P2 protein I family; phage tail protein, P2 protein I family 1631135..1631665 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791102 YP_005199566.1 CDS Rahaq2_1548 NC_016818.1 1631680 1633416 D PFAM: Phage tail fibre repeat; phage-related tail fiber protein 1631680..1633416 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791103 YP_005199567.1 CDS Rahaq2_1549 NC_016818.1 1633435 1633866 D PFAM: Caudovirales tail fibre assembly protein; tail fiber assembly protein 1633435..1633866 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791104 YP_005199568.1 CDS Rahaq2_1550 NC_016818.1 1633987 1635174 D PFAM: Phage tail sheath protein; phage tail sheath protein FI 1633987..1635174 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791105 YP_005199569.1 CDS Rahaq2_1551 NC_016818.1 1635186 1635704 D PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family; phage contractile tail tube protein, P2 family 1635186..1635704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791106 YP_005199570.1 CDS Rahaq2_1552 NC_016818.1 1635759 1636055 D PFAM: Phage tail protein E; Phage tail protein E 1635759..1636055 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791107 YP_005199571.1 CDS Rahaq2_1553 NC_016818.1 1636052 1636210 D PFAM: Phage P2 GpE; manually curated; non-canonical start codon; Phage P2 GpE 1636052..1636210 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791108 YP_005199572.1 CDS Rahaq2_1554 NC_016818.1 1636200 1638653 D PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region; phage tail tape measure protein, TP901 family 1636200..1638653 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791109 YP_005199573.1 CDS Rahaq2_1555 NC_016818.1 1638666 1639130 D PFAM: Phage P2 GpU; phage protein U 1638666..1639130 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791110 YP_005199574.1 CDS Rahaq2_1556 NC_016818.1 1639127 1640290 D PFAM: Phage late control gene D protein (GPD); phage protein D 1639127..1640290 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793934 YP_005199575.1 CDS Rahaq2_1557 NC_016818.1 1640374 1640592 D PFAM: Ogr/Delta-like zinc finger; Ogr/Delta-like zinc finger 1640374..1640592 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791111 YP_005199576.1 CDS Rahaq2_1558 NC_016818.1 1641009 1643291 R PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1 complement(1641009..1643291) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791112 YP_005199577.1 CDS Rahaq2_1559 NC_016818.1 1643369 1644226 R PFAM: Formate/nitrite transporter; TIGRFAM: formate transporter FocA; formate/nitrite transporter; formate transporter FocA complement(1643369..1644226) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793935 YP_005199578.1 CDS Rahaq2_1560 NC_016818.1 1644725 1646542 R PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; hypothetical protein complement(1644725..1646542) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791113 YP_005199579.1 CDS Rahaq2_1561 NC_016818.1 1646649 1647338 D PFAM: Protein of unknown function (DUF421); hypothetical protein 1646649..1647338 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791114 YP_005199580.1 CDS Rahaq2_1562 NC_016818.1 1647511 1648596 D PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase 1647511..1648596 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791115 YP_005199581.1 CDS Rahaq2_1563 NC_016818.1 1648701 1649984 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 1648701..1649984 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793936 YP_005199582.1 CDS Rahaq2_1564 NC_016818.1 1650181 1650879 D PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 1650181..1650879 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791116 YP_005199583.1 CDS Rahaq2_1565 NC_016818.1 1651000 1652709 D PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; 30S ribosomal protein S1 1651000..1652709 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791117 YP_005199584.1 CDS Rahaq2_1566 NC_016818.1 1652770 1653054 D PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; integration host factor subunit beta 1652770..1653054 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791118 YP_005199585.1 CDS Rahaq2_1567 NC_016818.1 1653315 1655561 D PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; manually curated; DNA internalization-related competence protein ComEC/Rec2 1653315..1655561 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791119 YP_005199586.1 CDS Rahaq2_1568 NC_016818.1 1655600 1657348 D PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; lipid A export permease/ATP-binding protein MsbA 1655600..1657348 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791120 YP_005199587.1 CDS Rahaq2_1569 NC_016818.1 1657345 1658334 D PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4''-kinase 1657345..1658334 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793937 YP_005199588.1 CDS Rahaq2_1570 NC_016818.1 1658684 1658893 D PFAM: 'Cold-shock' DNA-binding domain; cold shock protein 1658684..1658893 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791121 YP_005199589.1 CDS Rahaq2_1571 NC_016818.1 1659155 1659367 D PFAM: 'Cold-shock' DNA-binding domain; cold shock protein 1659155..1659367 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791122 YP_005199590.1 CDS Rahaq2_1572 NC_016818.1 1659463 1660686 D PFAM: Protein of unknown function (DUF1006); hypothetical protein 1659463..1660686 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791123 YP_005199591.1 CDS Rahaq2_1573 NC_016818.1 1661065 1661247 D PFAM: Trm112p-like protein; hypothetical protein 1661065..1661247 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791124 YP_005199592.1 CDS Rahaq2_1574 NC_016818.1 1661244 1662002 D PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1661244..1662002 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791125 YP_005199593.1 CDS Rahaq2_1575 NC_016818.1 1662198 1663091 D PFAM: Phosphotransferase enzyme family; phosphotransferase family protein 1662198..1663091 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791126 YP_005199594.1 CDS Rahaq2_1576 NC_016818.1 1663093 1663872 R PFAM: DUF218 domain; hypothetical protein complement(1663093..1663872) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793938 YP_005199595.1 CDS Rahaq2_1577 NC_016818.1 1664029 1664814 D PFAM: Methyltransferase domain; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase 1664029..1664814 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791127 YP_005199596.1 CDS Rahaq2_1578 NC_016818.1 1664811 1666133 D PFAM: KicB killing factor; hypothetical protein 1664811..1666133 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791128 YP_005199597.1 CDS Rahaq2_1579 NC_016818.1 1666114 1666845 D PFAM: MukE-like family; hypothetical protein 1666114..1666845 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791129 YP_005199598.1 CDS Rahaq2_1580 NC_016818.1 1666842 1671290 D PFAM: MukB N-terminal; hypothetical protein 1666842..1671290 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793939 YP_005199599.1 CDS Rahaq2_1581 NC_016818.1 1671652 1673502 D PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain; hypothetical protein 1671652..1673502 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791130 YP_005199600.1 CDS Rahaq2_1582 NC_016818.1 1673682 1674233 D PFAM: Bacterial protein of unknown function (DUF882); hypothetical protein 1673682..1674233 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791131 YP_005199601.1 CDS Rahaq2_1583 NC_016818.1 1674285 1674932 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 1674285..1674932 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793940 YP_005199602.1 CDS Rahaq2_1584 NC_016818.1 1675017 1676207 R PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase complement(1675017..1676207) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791132 YP_005199603.1 CDS Rahaq2_1585 NC_016818.1 1676449 1677597 R PFAM: Gram-negative porin; outer membrane protein (porin) complement(1676449..1677597) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791133 YP_005199604.1 CDS Rahaq2_1586 NC_016818.1 1677898 1679298 R PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; asparaginyl-tRNA synthetase complement(1677898..1679298) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791134 YP_005199605.1 CDS Rahaq2_1587 NC_016818.1 1679558 1680763 R PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase complement(1679558..1680763) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791135 YP_005199606.1 CDS Rahaq2_1588 NC_016818.1 1681454 1684069 D PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type; aminopeptidase N 1681454..1684069 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791136 YP_005199607.1 CDS Rahaq2_1590 NC_016818.1 1684262 1684720 D PFAM: Transposase IS200 like; manually curated; transposase 1684262..1684720 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791137 YP_005199608.1 CDS Rahaq2_1591 NC_016818.1 1684857 1685639 R PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase complement(1684857..1685639) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791138 YP_005199609.1 CDS Rahaq2_1592 NC_016818.1 1685636 1686427 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(1685636..1686427) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791139 YP_005199610.1 CDS Rahaq2_1593 NC_016818.1 1686439 1687593 R PFAM: Luciferase-like monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; alkanesulfonate monooxygenase complement(1686439..1687593) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791140 YP_005199611.1 CDS Rahaq2_1594 NC_016818.1 1687653 1688627 R PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family; ABC transporter, substrate-binding protein, aliphatic sulfonates family complement(1687653..1688627) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791141 YP_005199612.1 CDS Rahaq2_1595 NC_016818.1 1688646 1689227 R PFAM: NADPH-dependent FMN reductase; TIGRFAM: FMN reductase, SsuE family; FMN reductase, SsuE family complement(1688646..1689227) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791142 YP_005199613.1 CDS Rahaq2_1596 NC_016818.1 1689543 1690553 D PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; dihydroorotate dehydrogenase, subfamily 2 1689543..1690553 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791143 YP_005199614.1 CDS Rahaq2_1597 NC_016818.1 1690738 1691286 D PFAM: Protein of unknown function (DUF1379); hypothetical protein 1690738..1691286 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791144 YP_005199615.1 CDS Rahaq2_1598 NC_016818.1 1691317 1692420 R PFAM: MOSC N-terminal beta barrel domain; 2Fe-2S iron-sulfur cluster binding domain; MOSC domain; putative Fe-S protein complement(1691317..1692420) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791145 YP_005199616.1 CDS Rahaq2_1599 NC_016818.1 1692531 1694651 D PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain; putative N6-adenine-specific DNA methylase 1692531..1694651 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791146 YP_005199617.1 CDS Rahaq2_1600 NC_016818.1 1694657 1696561 D PFAM: ABC transporter; ABC transporter ATPase 1694657..1696561 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791147 YP_005199618.1 CDS Rahaq2_1601 NC_016818.1 1696642 1697913 D PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; PqiA family integral membrane protein 1696642..1697913 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791148 YP_005199619.1 CDS Rahaq2_1602 NC_016818.1 1697900 1699552 D PFAM: mce related protein; qaraquat-inducible protein B 1697900..1699552 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791149 YP_005199620.1 CDS Rahaq2_1603 NC_016818.1 1699552 1700118 D PFAM: Protein of unknown function (DUF330); hypothetical protein 1699552..1700118 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791150 YP_005199621.1 CDS Rahaq2_1604 NC_016818.1 1700394 1700561 D PFAM: Ribosome modulation factor; ribosome modulation factor 1700394..1700561 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791151 YP_005199622.1 CDS Rahaq2_1605 NC_016818.1 1700711 1701229 R PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA; beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA complement(1700711..1701229) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791152 YP_005199623.1 CDS Rahaq2_1606 NC_016818.1 1701298 1703064 R PFAM: Lon protease (S16) C-terminal proteolytic domain; putative ATP-dependent protease complement(1701298..1703064) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791153 YP_005199624.1 CDS Rahaq2_1607 NC_016818.1 1703275 1703736 D PFAM: Organiser of macrodomain of Terminus of chromosome; hypothetical protein 1703275..1703736 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791154 YP_005199625.1 CDS Rahaq2_1608 NC_016818.1 1703843 1704919 R PFAM: OmpA-like transmembrane domain; OmpA family; outer membrane protein/peptidoglycan-associated (lipo)protein complement(1703843..1704919) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791155 YP_005199626.1 CDS Rahaq2_1609 NC_016818.1 1705277 1705783 R PFAM: Cell division inhibitor SulA; TIGRFAM: cell division inhibitor SulA; SOS-response cell division inhibitor, blocks FtsZ ring formation complement(1705277..1705783) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791156 YP_005199627.1 CDS Rahaq2_1610 NC_016818.1 1706000 1706632 D PFAM: TfoX N-terminal domain; TfoX C-terminal domain; competence-specific genes regulator 1706000..1706632 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793942 YP_005199628.1 CDS Rahaq2_1611 NC_016818.1 1706654 1708795 R PFAM: Fusaric acid resistance protein family; TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical membrane protein, TIGR01666; hypothetical protein complement(1706654..1708795) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791157 YP_005199629.1 CDS Rahaq2_1612 NC_016818.1 1708840 1709301 R PFAM: Domain of unknown function (DUF307); hypothetical protein complement(1708840..1709301) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791158 YP_005199630.1 CDS Rahaq2_1613 NC_016818.1 1709443 1711533 D PFAM: UvrD/REP helicase; DNA helicase IV / RNA helicase N terminal; DNA/RNA helicase 1709443..1711533 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793943 YP_005199631.1 CDS Rahaq2_1614 NC_016818.1 1711600 1712061 R PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase; methylglyoxal synthase complement(1711600..1712061) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791159 YP_005199632.1 CDS Rahaq2_1615 NC_016818.1 1712181 1712840 R PFAM: Uncharacterized protein conserved in bacteria (DUF2057); hypothetical protein complement(1712181..1712840) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791160 YP_005199633.1 CDS Rahaq2_1616 NC_016818.1 1713030 1713443 D PFAM: CoA binding domain; putative CoA-binding protein 1713030..1713443 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793944 YP_005199634.1 CDS Rahaq2_1617 NC_016818.1 1713526 1713843 R PFAM: Hemimethylated DNA-binding protein YccV like; TIGRFAM: hemimethylated DNA binding domain; hemimethylated DNA binding domain protein complement(1713526..1713843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791161 YP_005199635.1 CDS Rahaq2_1618 NC_016818.1 1713970 1715205 R PFAM: S-adenosylmethionine-dependent methyltransferase; putative SAM-dependent methyltransferase complement(1713970..1715205) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791162 YP_005199636.1 CDS Rahaq2_1619 NC_016818.1 1715262 1715540 D PFAM: Acylphosphatase; acylphosphatase 1715262..1715540 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791163 YP_005199637.1 CDS Rahaq2_1620 NC_016818.1 1715547 1715876 R PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; TusE/DsrC/DsvC family sulfur relay protein complement(1715547..1715876) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791164 YP_005199638.1 CDS Rahaq2_1621 NC_016818.1 1715983 1716654 R PFAM: Uncharacterised protein family UPF0005; FtsH-interacting integral membrane protein complement(1715983..1716654) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791165 YP_005199639.1 CDS Rahaq2_1622 NC_016818.1 1716696 1716812 D manually curated; hypothetical protein 1716696..1716812 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791166 YP_005199640.1 CDS Rahaq2_1625 NC_016818.1 1717491 1718408 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(1717491..1718408) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791169 YP_005199641.1 CDS Rahaq2_1626 NC_016818.1 1718527 1719417 D PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 1718527..1719417 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791170 YP_005199642.1 CDS Rahaq2_1627 NC_016818.1 1719616 1720704 D PFAM: Bacterial extracellular solute-binding protein; Fe3+ ABC transporter periplasmic protein 1719616..1720704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791171 YP_005199643.1 CDS Rahaq2_1628 NC_016818.1 1720802 1722571 D PFAM: Binding-protein-dependent transport system inner membrane component; Fe3+ ABC transporter permease 1720802..1722571 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791172 YP_005199644.1 CDS Rahaq2_1629 NC_016818.1 1722564 1723634 D PFAM: ABC transporter; spermidine/putrescine ABC transporter ATPase 1722564..1723634 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791173 YP_005199645.1 CDS Rahaq2_1630 NC_016818.1 1723733 1725358 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue; methyl-accepting chemotaxis protein 1723733..1725358 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793945 YP_005199646.1 CDS Rahaq2_1631 NC_016818.1 1725367 1725966 R PFAM: Cupin domain; hypothetical protein complement(1725367..1725966) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791174 YP_005199647.1 CDS Rahaq2_1632 NC_016818.1 1726207 1726539 D PFAM: SmpA / OmlA family; small protein A (tmRNA-binding) 1726207..1726539 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791175 YP_005199648.1 CDS Rahaq2_1633 NC_016818.1 1726594 1728426 R hypothetical protein complement(1726594..1728426) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793946 YP_005199649.1 CDS Rahaq2_1634 NC_016818.1 1728598 1729347 R PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator complement(1728598..1729347) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791176 YP_005199650.1 CDS Rahaq2_1635 NC_016818.1 1729589 1730068 D PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-like IIB component 1729589..1730068 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791177 YP_005199651.1 CDS Rahaq2_1636 NC_016818.1 1730082 1731011 D hypothetical protein 1730082..1731011 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791178 YP_005199652.1 CDS Rahaq2_1637 NC_016818.1 1731079 1732806 R PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; Transporter associated domain; NhaP-type Na+(K+)/H+ antiporter complement(1731079..1732806) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793947 YP_005199653.1 CDS Rahaq2_1638 NC_016818.1 1733001 1733195 D hypothetical protein 1733001..1733195 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791179 YP_005199654.1 CDS Rahaq2_1639 NC_016818.1 1733259 1734572 R PFAM: FAD dependent oxidoreductase; glycine/D-amino acid oxidase, deaminating complement(1733259..1734572) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791180 YP_005199655.1 CDS Rahaq2_1640 NC_016818.1 1734623 1735180 R PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator complement(1734623..1735180) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791181 YP_005199656.1 CDS Rahaq2_1641 NC_016818.1 1735185 1735988 R PFAM: Peptidase C26; putative glutamine amidotransferase complement(1735185..1735988) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791182 YP_005199657.1 CDS Rahaq2_1642 NC_016818.1 1736340 1737782 D PFAM: Glutamine synthetase, catalytic domain; glutamine synthetase 1736340..1737782 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791183 YP_005199658.1 CDS Rahaq2_1643 NC_016818.1 1738042 1738254 D hypothetical protein 1738042..1738254 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791184 YP_005199659.1 CDS Rahaq2_1644 NC_016818.1 1738244 1739620 D PFAM: Amino acid permease; amino acid transporter 1738244..1739620 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791185 YP_005199660.1 CDS Rahaq2_1645 NC_016818.1 1739767 1741347 R PFAM: Exonuclease; Exonuclease C-terminal; exonuclease I complement(1739767..1741347) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791186 YP_005199661.1 CDS Rahaq2_1646 NC_016818.1 1741424 1742521 D PFAM: Fusaric acid resistance protein family; hypothetical protein 1741424..1742521 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791187 YP_005199662.1 CDS Rahaq2_1647 NC_016818.1 1742690 1743022 D PFAM: Protein of unknown function (DUF496); hypothetical protein 1742690..1743022 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791188 YP_005199663.1 CDS Rahaq2_1648 NC_016818.1 1743099 1744058 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase-like oxidoreductase complement(1743099..1744058) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791189 YP_005199664.1 CDS Rahaq2_1649 NC_016818.1 1744152 1745255 R PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATPase complement(1744152..1745255) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791190 YP_005199665.1 CDS Rahaq2_1650 NC_016818.1 1745532 1746758 D PFAM: Bacterial extracellular solute-binding protein; maltose-binding periplasmic protein 1745532..1746758 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791191 YP_005199666.1 CDS Rahaq2_1651 NC_016818.1 1746838 1748145 D PFAM: Binding-protein-dependent transport system inner membrane component; TM2 domain; sugar ABC transporter permease 1746838..1748145 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791192 YP_005199667.1 CDS Rahaq2_1652 NC_016818.1 1748160 1749011 D PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type maltose transport systems, permease component 1748160..1749011 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791193 YP_005199668.1 CDS Rahaq2_1653 NC_016818.1 1749016 1750227 D PFAM: Glycosyl hydrolase family 53; arabinogalactan endo-1,4-beta-galactosidase 1749016..1750227 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791194 YP_005199669.1 CDS Rahaq2_1654 NC_016818.1 1750292 1752361 D PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase; beta-galactosidase 1750292..1752361 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793948 YP_005199670.1 CDS Rahaq2_1655 NC_016818.1 1752441 1752758 D PFAM: phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-like IIB component 1752441..1752758 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791195 YP_005199671.1 CDS Rahaq2_1656 NC_016818.1 1753081 1754337 R PFAM: LamB porin; maltoporin (phage lambda and maltose receptor) complement(1753081..1754337) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791196 YP_005199672.1 CDS Rahaq2_1657 NC_016818.1 1754616 1755686 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 1754616..1755686 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793949 YP_005199673.1 CDS Rahaq2_1658 NC_016818.1 1755902 1756450 R PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234); putative esterase of the alpha/beta hydrolase fold protein complement(1755902..1756450) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791197 YP_005199674.1 CDS Rahaq2_1659 NC_016818.1 1756447 1757286 R PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; triphosphoribosyl-dephospho-CoA synthase CitG complement(1756447..1757286) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791198 YP_005199675.1 CDS Rahaq2_1660 NC_016818.1 1757264 1757803 R PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX; holo-ACP synthase CitX complement(1757264..1757803) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791199 YP_005199676.1 CDS Rahaq2_1661 NC_016818.1 1757803 1759329 R PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit; citrate lyase subunit alpha complement(1757803..1759329) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791200 YP_005199677.1 CDS Rahaq2_1662 NC_016818.1 1759360 1760235 R PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit; citrate lyase subunit beta complement(1759360..1760235) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791201 YP_005199678.1 CDS Rahaq2_1663 NC_016818.1 1760232 1760522 R PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein; citrate lyase acyl carrier protein complement(1760232..1760522) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791202 YP_005199679.1 CDS Rahaq2_1664 NC_016818.1 1760538 1761632 R PFAM: Citrate lyase ligase C-terminal domain; TIGRFAM: [citrate (pro-3S)-lyase] ligase; cytidyltransferase-related domain; (citrate (pro-3S)-lyase) ligase complement(1760538..1761632) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791203 YP_005199680.1 CDS Rahaq2_1665 NC_016818.1 1761719 1762606 R PFAM: Fumarylacetoacetate (FAA) hydrolase family; 2-keto-4-pentenoate hydratase complement(1761719..1762606) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791204 YP_005199681.1 CDS Rahaq2_1666 NC_016818.1 1762643 1764007 R PFAM: 2-hydroxycarboxylate transporter family; Na+/citrate symporter complement(1762643..1764007) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791205 YP_005199682.1 CDS Rahaq2_1667 NC_016818.1 1764117 1764212 D hypothetical protein 1764117..1764212 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791206 YP_005199683.1 CDS Rahaq2_1668 NC_016818.1 1764378 1766045 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase regulating citrate/malate metabolism 1764378..1766045 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791207 YP_005199684.1 CDS Rahaq2_1669 NC_016818.1 1766032 1766721 D PFAM: Response regulator receiver domain; Transcriptional regulator; response regulator of citrate/malate metabolism 1766032..1766721 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793950 YP_005199685.1 CDS Rahaq2_1670 NC_016818.1 1766732 1768162 R PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family complement(1766732..1768162) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791208 YP_005199686.1 CDS Rahaq2_1671 NC_016818.1 1768395 1769843 R PFAM: Bacterial AMP nucleoside phosphorylase N-terminus; Phosphorylase superfamily; TIGRFAM: AMP nucleosidase; AMP nucleosidase complement(1768395..1769843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791209 YP_005199687.1 CDS Rahaq2_1672 NC_016818.1 1769971 1770612 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase 1769971..1770612 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793951 YP_005199688.1 CDS Rahaq2_1673 NC_016818.1 1770679 1771998 R PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter; metabolite-proton symporter complement(1770679..1771998) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791210 YP_005199689.1 CDS Rahaq2_1674 NC_016818.1 1772199 1772897 R PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; 23S RNA-specific pseudouridylate synthase complement(1772199..1772897) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791211 YP_005199690.1 CDS Rahaq2_1675 NC_016818.1 1773030 1774535 R PFAM: C4-dicarboxylate anaerobic carrier; hypothetical protein complement(1773030..1774535) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791212 YP_005199691.1 CDS Rahaq2_1676 NC_016818.1 1774535 1775470 R PFAM: BadF/BadG/BcrA/BcrD ATPase family; putative N-acetylglucosamine kinase complement(1774535..1775470) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791213 YP_005199692.1 CDS Rahaq2_1677 NC_016818.1 1775467 1776486 R putative phosphosugar isomerase complement(1775467..1776486) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791214 YP_005199693.1 CDS Rahaq2_1678 NC_016818.1 1776552 1776689 R hypothetical protein complement(1776552..1776689) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791215 YP_005199694.1 CDS Rahaq2_1679 NC_016818.1 1776843 1778585 D PFAM: ROK family; transcriptional regulator/sugar kinase 1776843..1778585 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791216 YP_005199695.1 CDS Rahaq2_1680 NC_016818.1 1778660 1779472 R PFAM: pfkB family carbohydrate kinase; sugar kinase complement(1778660..1779472) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793952 YP_005199696.1 CDS Rahaq2_1681 NC_016818.1 1779484 1780461 R PFAM: SIS domain; putative phosphosugar isomerase complement(1779484..1780461) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791217 YP_005199697.1 CDS Rahaq2_1682 NC_016818.1 1780465 1781244 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; lysine-arginine-ornithine-binding periplasmic protein complement(1780465..1781244) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791218 YP_005199698.1 CDS Rahaq2_1683 NC_016818.1 1781479 1782243 D PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator 1781479..1782243 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791219 YP_005199699.1 CDS Rahaq2_1684 NC_016818.1 1782267 1783730 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family efflux transporter outer membrane lipoprotein complement(1782267..1783730) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793953 YP_005199700.1 CDS Rahaq2_1685 NC_016818.1 1783820 1784434 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 1783820..1784434 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793954 YP_005199701.1 CDS Rahaq2_1686 NC_016818.1 1784510 1785619 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 1784510..1785619 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791220 YP_005199702.1 CDS Rahaq2_1687 NC_016818.1 1785616 1788729 D PFAM: AcrB/AcrD/AcrF family; cation/multidrug efflux pump 1785616..1788729 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793955 YP_005199703.1 CDS Rahaq2_1688 NC_016818.1 1789603 1790145 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(1789603..1790145) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791221 YP_005199704.1 CDS Rahaq2_1689 NC_016818.1 1790280 1791371 D PFAM: NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase 1790280..1791371 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791222 YP_005199705.1 CDS Rahaq2_1690 NC_016818.1 1791432 1792214 D PFAM: short chain dehydrogenase; short-chain dehydrogenase 1791432..1792214 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791223 YP_005199706.1 CDS Rahaq2_1691 NC_016818.1 1792230 1793165 D PFAM: short chain dehydrogenase; short-chain dehydrogenase 1792230..1793165 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791224 YP_005199707.1 CDS Rahaq2_1692 NC_016818.1 1793169 1793579 D hypothetical protein 1793169..1793579 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791225 YP_005199708.1 CDS Rahaq2_1693 NC_016818.1 1793576 1794595 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent oxidoreductase 1793576..1794595 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791226 YP_005199709.1 CDS Rahaq2_1694 NC_016818.1 1795241 1795468 R hypothetical protein complement(1795241..1795468) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791227 YP_005199710.1 CDS Rahaq2_1695 NC_016818.1 1795576 1796595 D hypothetical protein 1795576..1796595 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791228 YP_005199711.1 CDS Rahaq2_1696 NC_016818.1 1796754 1796897 R hypothetical protein complement(1796754..1796897) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791229 YP_005199712.1 CDS Rahaq2_1697 NC_016818.1 1796966 1798846 R hypothetical protein complement(1796966..1798846) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791230 YP_005199713.1 CDS Rahaq2_1698 NC_016818.1 1798843 1799349 R hypothetical protein complement(1798843..1799349) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791231 YP_005199714.1 CDS Rahaq2_1699 NC_016818.1 1799334 1800422 R hypothetical protein complement(1799334..1800422) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791232 YP_005199715.1 CDS Rahaq2_1700 NC_016818.1 1800419 1801414 R PFAM: Restriction endonuclease; restriction endonuclease complement(1800419..1801414) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791233 YP_005199716.1 CDS Rahaq2_1703 NC_016818.1 1802467 1803411 D PFAM: Domain of unknown function (DUF1738); antirestriction protein 1802467..1803411 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791236 YP_005199717.1 CDS Rahaq2_1704 NC_016818.1 1804158 1805999 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); manually curated; reverse transcriptase 1804158..1805999 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793956 YP_005199718.1 CDS Rahaq2_1705 NC_016818.1 1806291 1806788 D hypothetical protein 1806291..1806788 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791237 YP_005199719.1 CDS Rahaq2_1706 NC_016818.1 1807067 1807942 D hypothetical protein 1807067..1807942 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791238 YP_005199720.1 CDS Rahaq2_1707 NC_016818.1 1808364 1809800 R PFAM: Protein kinase domain; protein kinase family protein complement(1808364..1809800) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793957 YP_005199721.1 CDS Rahaq2_1708 NC_016818.1 1810345 1811433 D hypothetical protein 1810345..1811433 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791239 YP_005199722.1 CDS Rahaq2_1709 NC_016818.1 1811872 1811961 R hypothetical protein complement(1811872..1811961) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791240 YP_005199723.1 CDS Rahaq2_1710 NC_016818.1 1811972 1812409 R hypothetical protein complement(1811972..1812409) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791241 YP_005199724.1 CDS Rahaq2_1711 NC_016818.1 1812716 1813276 R hypothetical protein complement(1812716..1813276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791242 YP_005199725.1 CDS Rahaq2_1712 NC_016818.1 1813659 1814996 D hypothetical protein 1813659..1814996 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791243 YP_005199726.1 CDS Rahaq2_1713 NC_016818.1 1815024 1815203 R hypothetical protein complement(1815024..1815203) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791244 YP_005199727.1 CDS Rahaq2_1714 NC_016818.1 1815439 1815726 R hypothetical protein complement(1815439..1815726) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791245 YP_005199728.1 CDS Rahaq2_1715 NC_016818.1 1815834 1816580 R hypothetical protein complement(1815834..1816580) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791246 YP_005199729.1 CDS Rahaq2_1716 NC_016818.1 1816591 1818462 R hypothetical protein complement(1816591..1818462) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791247 YP_005199730.1 CDS Rahaq2_1717 NC_016818.1 1818857 1819666 D PFAM: Pentapeptide repeats (8 copies); putative low-complexity protein 1818857..1819666 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791248 YP_005199731.1 CDS Rahaq2_1718 NC_016818.1 1819669 1820304 D PFAM: Nucleotidyltransferase domain; nucleotidyltransferase family protein 1819669..1820304 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791249 YP_005199732.1 CDS Rahaq2_1719 NC_016818.1 1820297 1820614 D hypothetical protein 1820297..1820614 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791250 YP_005199733.1 CDS Rahaq2_1720 NC_016818.1 1820764 1822134 D hypothetical protein 1820764..1822134 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791251 YP_005199734.1 CDS Rahaq2_1721 NC_016818.1 1823055 1823360 R hypothetical protein complement(1823055..1823360) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791252 YP_005199735.1 CDS Rahaq2_1722 NC_016818.1 1823379 1823681 R PFAM: TrbM; TrbM complement(1823379..1823681) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793958 YP_005199736.1 CDS Rahaq2_1723 NC_016818.1 1823731 1824759 R PFAM: Type II/IV secretion system protein; TIGRFAM: P-type DNA transfer ATPase VirB11; P-type DNA transfer ATPase VirB11 complement(1823731..1824759) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791253 YP_005199737.1 CDS Rahaq2_1724 NC_016818.1 1824749 1826044 R PFAM: Bacterial conjugation TrbI-like protein; type IV secretory pathway, VirB10 component complement(1824749..1826044) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793959 YP_005199738.1 CDS Rahaq2_1725 NC_016818.1 1826041 1826925 R PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein VirB9; P-type conjugative transfer protein VirB9 complement(1826041..1826925) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793960 YP_005199739.1 CDS Rahaq2_1726 NC_016818.1 1826925 1827608 R PFAM: VirB8 protein; type IV secretory pathway, component VirB8 complement(1826925..1827608) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791254 YP_005199740.1 CDS Rahaq2_1727 NC_016818.1 1827601 1827741 R manually curated; hypothetical protein complement(1827601..1827741) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791255 YP_005199741.1 CDS Rahaq2_1728 NC_016818.1 1827831 1828862 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; type IV secretory pathway, VirB6 component complement(1827831..1828862) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791256 YP_005199742.1 CDS Rahaq2_1729 NC_016818.1 1828936 1829211 R hypothetical protein complement(1828936..1829211) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791257 YP_005199743.1 CDS Rahaq2_1730 NC_016818.1 1829222 1829941 R PFAM: Type IV secretion system proteins; Type IV secretion system protein complement(1829222..1829941) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791258 YP_005199744.1 CDS Rahaq2_1731 NC_016818.1 1829965 1832712 R PFAM: CagE, TrbE, VirB family, component of type IV transporter system; Type IV secretory pathway, VirB3-like protein; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; type IV secretory pathway, VirB4 component complement(1829965..1832712) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791259 YP_005199745.1 CDS Rahaq2_1732 NC_016818.1 1832724 1833005 R PFAM: TrbC/VIRB2 family; TrbC/VIRB2 family protein complement(1832724..1833005) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791260 YP_005199746.1 CDS Rahaq2_1733 NC_016818.1 1833002 1833649 R PFAM: Transglycosylase SLT domain; transglycosylase complement(1833002..1833649) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791261 YP_005199747.1 CDS Rahaq2_1734 NC_016818.1 1833718 1833939 R hypothetical protein complement(1833718..1833939) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791262 YP_005199748.1 CDS Rahaq2_1735 NC_016818.1 1834334 1834543 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; phage/conjugal plasmid C-4 type zinc finger protein, TraR family complement(1834334..1834543) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791263 YP_005199749.1 CDS Rahaq2_1736 NC_016818.1 1834533 1835120 R PFAM: Protein of unknown function (DUF2857); hypothetical protein complement(1834533..1835120) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791264 YP_005199750.1 CDS Rahaq2_1737 NC_016818.1 1835135 1835329 R PFAM: Prophage CP4-57 regulatory protein (AlpA); putative transcriptional regulator complement(1835135..1835329) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791265 YP_005199751.1 CDS Rahaq2_1738 NC_016818.1 1835465 1836377 R manually curated; hypothetical protein complement(join(1835465..1835629,1835628..1836377)) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791266 YP_005199752.1 CDS Rahaq2_1739 NC_016818.1 1836432 1837088 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(1836432..1837088) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791267 YP_005199753.1 CDS Rahaq2_1740 NC_016818.1 1837100 1837948 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 1837100..1837948 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791268 YP_005199754.1 CDS Rahaq2_1741 NC_016818.1 1838127 1838744 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(1838127..1838744) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791269 YP_005199755.1 CDS Rahaq2_1742 NC_016818.1 1838982 1840046 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 1838982..1840046 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791270 YP_005199756.1 CDS Rahaq2_1743 NC_016818.1 1840047 1841138 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 1840047..1841138 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791271 YP_005199757.1 CDS Rahaq2_1744 NC_016818.1 1841135 1844185 D PFAM: AcrB/AcrD/AcrF family; cation/multidrug efflux pump 1841135..1844185 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793961 YP_005199758.1 CDS Rahaq2_1745 NC_016818.1 1844253 1845710 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family efflux transporter outer membrane lipoprotein 1844253..1845710 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793962 YP_005199759.1 CDS Rahaq2_1746 NC_016818.1 1845788 1846270 R PFAM: MarR family; transcriptional regulator complement(1845788..1846270) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791272 YP_005199760.1 CDS Rahaq2_1747 NC_016818.1 1846341 1847276 D PFAM: Zinc-binding dehydrogenase; Zn-dependent oxidoreductase 1846341..1847276 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791273 YP_005199761.1 CDS Rahaq2_1748 NC_016818.1 1847733 1849001 R PFAM: Phage integrase family; Integrase complement(1847733..1849001) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791274 YP_005199762.1 CDS Rahaq2_1750 NC_016818.1 1849520 1850692 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 1849520..1850692 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791275 YP_005199763.1 CDS Rahaq2_1751 NC_016818.1 1850761 1851099 R hypothetical protein complement(1850761..1851099) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791276 YP_005199764.1 CDS Rahaq2_1752 NC_016818.1 1851296 1851601 R PFAM: Protein of unknown function (DUF466); hypothetical protein complement(1851296..1851601) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791277 YP_005199765.1 CDS Rahaq2_1753 NC_016818.1 1851594 1853660 R PFAM: Carbon starvation protein CstA; carbon starvation membrane protein complement(1851594..1853660) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791278 YP_005199766.1 CDS Rahaq2_1754 NC_016818.1 1853949 1854458 R PFAM: LTXXQ motif; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein complement(1853949..1854458) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791279 YP_005199767.1 CDS Rahaq2_1755 NC_016818.1 1854648 1854791 R hypothetical protein complement(1854648..1854791) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791280 YP_005199768.1 CDS Rahaq2_1756 NC_016818.1 1854827 1856260 D PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II; transcriptional regulator with HTH domain and aminotransferase domain 1854827..1856260 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791281 YP_005199769.1 CDS Rahaq2_1758 NC_016818.1 1856428 1858068 R PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; FGGY-family pentulose kinase; FGGY-family pentulose kinase complement(1856428..1858068) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791283 YP_005199770.1 CDS Rahaq2_1759 NC_016818.1 1858098 1859051 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(1858098..1859051) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793964 YP_005199771.1 CDS Rahaq2_1760 NC_016818.1 1859053 1860042 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(1859053..1860042) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791284 YP_005199772.1 CDS Rahaq2_1761 NC_016818.1 1860035 1861555 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(1860035..1861555) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791285 YP_005199773.1 CDS Rahaq2_1762 NC_016818.1 1861821 1862807 R PFAM: family; sugar ABC transporter periplasmic protein complement(1861821..1862807) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791286 YP_005199774.1 CDS Rahaq2_1763 NC_016818.1 1863624 1864844 D PFAM: Aminotransferase class-III; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferases; acetylornithine/succinylornithine aminotransferase 1863624..1864844 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791287 YP_005199775.1 CDS Rahaq2_1764 NC_016818.1 1864873 1865946 D PFAM: Arginine N-succinyltransferase beta subunit; TIGRFAM: arginine N-succinyltransferase; arginine and ornithine succinyltransferase subunits; arginine N-succinyltransferase 1864873..1865946 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791288 YP_005199776.1 CDS Rahaq2_1765 NC_016818.1 1865943 1867421 D PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; succinylglutamic semialdehyde dehydrogenase 1865943..1867421 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791289 YP_005199777.1 CDS Rahaq2_1766 NC_016818.1 1867432 1868775 D PFAM: Succinylarginine dihydrolase; TIGRFAM: succinylarginine dihydrolase; succinylarginine dihydrolase 1867432..1868775 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791290 YP_005199778.1 CDS Rahaq2_1767 NC_016818.1 1868796 1869776 D PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; TIGRFAM: succinylglutamate desuccinylase; succinylglutamate desuccinylase 1868796..1869776 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791291 YP_005199779.1 CDS Rahaq2_1768 NC_016818.1 1870021 1870539 D hypothetical protein 1870021..1870539 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791292 YP_005199780.1 CDS Rahaq2_1771 NC_016818.1 1871372 1872853 D PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; amino acid/peptide transporter (peptide:H symporter) 1871372..1872853 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791295 YP_005199781.1 CDS Rahaq2_1772 NC_016818.1 1872979 1873920 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; phosphoglycerate dehydrogenase-like oxidoreductase 1872979..1873920 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791296 YP_005199782.1 CDS Rahaq2_1773 NC_016818.1 1873988 1874728 D PFAM: PHP domain; PHP family phosphohydrolase, histidinol phosphatase 1873988..1874728 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791297 YP_005199783.1 CDS Rahaq2_1774 NC_016818.1 1874789 1875373 D PFAM: Nitrate reductase delta subunit; putative component of anaerobic dehydrogenase 1874789..1875373 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791298 YP_005199784.1 CDS Rahaq2_1775 NC_016818.1 1875447 1876010 R PFAM: Protein of unknown function (DUF1439); hypothetical protein complement(1875447..1876010) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791299 YP_005199785.1 CDS Rahaq2_1776 NC_016818.1 1876153 1876800 R PFAM: Glutaredoxin 2, C terminal domain; TIGRFAM: Glutaredoxin, GrxB family; Glutaredoxin, GrxB family complement(1876153..1876800) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791300 YP_005199786.1 CDS Rahaq2_1777 NC_016818.1 1877010 1878215 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(1877010..1878215) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791301 YP_005199787.1 CDS Rahaq2_1778 NC_016818.1 1878428 1879015 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 1878428..1879015 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793965 YP_005199788.1 CDS Rahaq2_1779 NC_016818.1 1879026 1879679 D PFAM: Protein of unknown function, DUF480; hypothetical protein 1879026..1879679 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791302 YP_005199789.1 CDS Rahaq2_1780 NC_016818.1 1879692 1880603 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 1879692..1880603 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791303 YP_005199790.1 CDS Rahaq2_1781 NC_016818.1 1880797 1882332 D PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 1880797..1882332 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791304 YP_005199791.1 CDS Rahaq2_1782 NC_016818.1 1882399 1884132 R PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(1882399..1884132) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791305 YP_005199792.1 CDS Rahaq2_1783 NC_016818.1 1884358 1884918 D PFAM: YecM protein; hypothetical protein 1884358..1884918 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791306 YP_005199793.1 CDS Rahaq2_1784 NC_016818.1 1884915 1886063 R PFAM: Aminotransferase class I and II; bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities complement(1884915..1886063) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791307 YP_005199794.1 CDS Rahaq2_1785 NC_016818.1 1886177 1886935 D PFAM: CutC family; hypothetical protein 1886177..1886935 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791308 YP_005199795.1 CDS Rahaq2_1786 NC_016818.1 1887068 1887184 R hypothetical protein complement(1887068..1887184) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791309 YP_005199796.1 CDS Rahaq2_1787 NC_016818.1 1887322 1887525 R hypothetical protein complement(1887322..1887525) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791310 YP_005199797.1 CDS Rahaq2_1788 NC_016818.1 1887697 1888668 R PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative; methyltransferase complement(1887697..1888668) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791311 YP_005199798.1 CDS Rahaq2_1789 NC_016818.1 1888665 1889408 R PFAM: Methyltransferase domain; TIGRFAM: methyltransferase, putative; methyltransferase complement(1888665..1889408) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791312 YP_005199799.1 CDS Rahaq2_1790 NC_016818.1 1889545 1889940 R PFAM: MAPEG family; putative MAPEG superfamily protein related to glutathione S-transferase complement(1889545..1889940) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791313 YP_005199800.1 CDS Rahaq2_1791 NC_016818.1 1890052 1890870 R PFAM: Protein of unknown function DUF72; hypothetical protein complement(1890052..1890870) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791314 YP_005199801.1 CDS Rahaq2_1792 NC_016818.1 1890954 1891529 R PFAM: Isochorismatase family; nicotinamidase-like amidase complement(1890954..1891529) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791315 YP_005199802.1 CDS Rahaq2_1793 NC_016818.1 1891864 1893660 D PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase 1891864..1893660 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793966 YP_005199803.1 CDS Rahaq2_1794 NC_016818.1 1893660 1894106 D PFAM: NUDIX domain; NTP pyrophosphohydrolase 1893660..1894106 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791316 YP_005199804.1 CDS Rahaq2_1795 NC_016818.1 1894132 1894875 D PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; YebC/PmpR family DNA-binding regulatory protein 1894132..1894875 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791317 YP_005199805.1 CDS Rahaq2_1796 NC_016818.1 1894983 1895504 D PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1894983..1895504 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791318 YP_005199806.1 CDS Rahaq2_1797 NC_016818.1 1895592 1896206 D PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase subunit RuvA 1895592..1896206 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791319 YP_005199807.1 CDS Rahaq2_1798 NC_016818.1 1896215 1897222 D PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase subunit RuvB 1896215..1897222 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793967 YP_005199808.1 CDS Rahaq2_1799 NC_016818.1 1897287 1899665 R PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase complement(1897287..1899665) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791320 YP_005199809.1 CDS Rahaq2_1800 NC_016818.1 1899662 1901074 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter complement(1899662..1901074) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791321 YP_005199810.1 CDS Rahaq2_1801 NC_016818.1 1901383 1902285 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(1901383..1902285) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791322 YP_005199811.1 CDS Rahaq2_1802 NC_016818.1 1902404 1903177 D PFAM: short chain dehydrogenase; dehydrogenase 1902404..1903177 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793968 YP_005199812.1 CDS Rahaq2_1803 NC_016818.1 1903483 1905357 D PFAM: Phosphotransferase system, EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose subfamily, IIA component; PTS system, beta-glucoside-specific IIABC component; PTS system beta-glucoside-specific transporter subunit IIABC 1903483..1905357 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791323 YP_005199813.1 CDS Rahaq2_1804 NC_016818.1 1905380 1906777 D PFAM: Glycosyl hydrolase family 1; beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase 1905380..1906777 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791324 YP_005199814.1 CDS Rahaq2_1805 NC_016818.1 1906947 1907786 D PFAM: CAT RNA binding domain; PRD domain; transcriptional antiterminator 1906947..1907786 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791325 YP_005199815.1 CDS Rahaq2_1806 NC_016818.1 1908026 1909507 D PFAM: Amino acid permease; gamma-aminobutyrate permease 1908026..1909507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791326 YP_005199816.1 CDS Rahaq2_1808 NC_016818.1 1909701 1910159 D PFAM: Transposase IS200 like; manually curated; transposase 1909701..1910159 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791327 YP_005199817.1 CDS Rahaq2_1809 NC_016818.1 1910356 1910553 D hypothetical protein 1910356..1910553 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791328 YP_005199818.1 CDS Rahaq2_1810 NC_016818.1 1910553 1911359 D hypothetical protein 1910553..1911359 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791329 YP_005199819.1 CDS Rahaq2_1811 NC_016818.1 1911379 1912068 R PFAM: Fumarylacetoacetate (FAA) hydrolase family; 2-keto-4-pentenoate hydratase complement(1911379..1912068) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791330 YP_005199820.1 CDS Rahaq2_1812 NC_016818.1 1912161 1912955 R PFAM: short chain dehydrogenase; short-chain dehydrogenase complement(1912161..1912955) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791331 YP_005199821.1 CDS Rahaq2_1813 NC_016818.1 1913071 1913517 D PFAM: HxlR-like helix-turn-helix; putative transcriptional regulator 1913071..1913517 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793970 YP_005199822.1 CDS Rahaq2_1814 NC_016818.1 1913752 1915779 R PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; putative hydrolase, CocE/NonD family complement(1913752..1915779) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791332 YP_005199823.1 CDS Rahaq2_1815 NC_016818.1 1915776 1917419 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain complement(1915776..1917419) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791333 YP_005199824.1 CDS Rahaq2_1816 NC_016818.1 1917416 1918243 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(1917416..1918243) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791334 YP_005199825.1 CDS Rahaq2_1817 NC_016818.1 1918256 1919203 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(1918256..1919203) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793971 YP_005199826.1 CDS Rahaq2_1818 NC_016818.1 1919203 1920786 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(1919203..1920786) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791335 YP_005199827.1 CDS Rahaq2_1819 NC_016818.1 1921005 1921280 D hypothetical protein 1921005..1921280 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791336 YP_005199828.1 CDS Rahaq2_1820 NC_016818.1 1921339 1922229 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(1921339..1922229) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791337 YP_005199829.1 CDS Rahaq2_1821 NC_016818.1 1922255 1923673 R PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II; transcriptional regulator with HTH domain and aminotransferase domain complement(1922255..1923673) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791338 YP_005199830.1 CDS Rahaq2_1822 NC_016818.1 1923842 1924114 D PFAM: Domain of unknown function (DUF1127); hypothetical protein 1923842..1924114 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793972 YP_005199831.1 CDS Rahaq2_1823 NC_016818.1 1924158 1926188 R PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; protein containing C-terminal region/beta chain of methionyl-tRNA synthetase complement(1924158..1926188) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791339 YP_005199832.1 CDS Rahaq2_1824 NC_016818.1 1926341 1927453 D PFAM: ParA/MinD ATPase like; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; chromosome partitioning ATPase 1926341..1927453 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791340 YP_005199833.1 CDS Rahaq2_1825 NC_016818.1 1927600 1928241 D PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase; uridine kinase 1927600..1928241 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791341 YP_005199834.1 CDS Rahaq2_1826 NC_016818.1 1928279 1928860 D PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 1928279..1928860 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791342 YP_005199835.1 CDS Rahaq2_1827 NC_016818.1 1928904 1930754 D PFAM: AsmA family; hypothetical protein 1928904..1930754 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791343 YP_005199836.1 CDS Rahaq2_1828 NC_016818.1 1930834 1932423 R PFAM: CBS domain; Integral membrane protein TerC family; Transporter associated domain; membrane protein TerC, possibly involved in tellurium resistance complement(1930834..1932423) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791344 YP_005199837.1 CDS Rahaq2_1829 NC_016818.1 1932718 1932891 D hypothetical protein 1932718..1932891 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791345 YP_005199838.1 CDS Rahaq2_1830 NC_016818.1 1932885 1933772 D PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 1932885..1933772 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791346 YP_005199839.1 CDS Rahaq2_1831 NC_016818.1 1934601 1935686 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1934601..1935686 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791347 YP_005199840.1 CDS Rahaq2_1832 NC_016818.1 1935686 1936585 D PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1935686..1936585 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791348 YP_005199841.1 CDS Rahaq2_1833 NC_016818.1 1936634 1937512 D PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase 1936634..1937512 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791349 YP_005199842.1 CDS Rahaq2_1834 NC_016818.1 1937516 1938055 D PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 1937516..1938055 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791350 YP_005199843.1 CDS Rahaq2_1835 NC_016818.1 1938447 1939856 D PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphogluconate dehydrogenase 1938447..1939856 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791351 YP_005199844.1 CDS Rahaq2_1836 NC_016818.1 1939974 1940615 R PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase complement(1939974..1940615) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791352 YP_005199845.1 CDS Rahaq2_1837 NC_016818.1 1940612 1941385 R PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit complement(1940612..1941385) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791353 YP_005199846.1 CDS Rahaq2_1838 NC_016818.1 1941367 1942104 R PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(1941367..1942104) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791354 YP_005199847.1 CDS Rahaq2_1839 NC_016818.1 1942110 1942700 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(1942110..1942700) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791355 YP_005199848.1 CDS Rahaq2_1840 NC_016818.1 1942700 1943782 R PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase; histidinol-phosphatase complement(1942700..1943782) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791356 YP_005199849.1 CDS Rahaq2_1841 NC_016818.1 1943779 1944912 R PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(1943779..1944912) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791357 YP_005199850.1 CDS Rahaq2_1842 NC_016818.1 1944912 1946225 R PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase complement(1944912..1946225) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791358 YP_005199851.1 CDS Rahaq2_1843 NC_016818.1 1946229 1947128 R PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase; ATP phosphoribosyltransferase complement(1946229..1947128) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793973 YP_005199852.1 CDS Rahaq2_1845 NC_016818.1 1947667 1948491 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 1947667..1948491 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791359 YP_005199853.1 CDS Rahaq2_1846 NC_016818.1 1949751 1950095 D PFAM: Flagellar transcriptional activator (FlhD); Flagellar transcriptional activator (FlhD) 1949751..1950095 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791360 YP_005199854.1 CDS Rahaq2_1847 NC_016818.1 1950098 1950706 D PFAM: Flagellar transcriptional activator (FlhC); Flagellar transcriptional activator (FlhC) 1950098..1950706 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791361 YP_005199855.1 CDS Rahaq2_1848 NC_016818.1 1950883 1951773 D PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA; flagellar motor stator protein MotA 1950883..1951773 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791362 YP_005199856.1 CDS Rahaq2_1849 NC_016818.1 1951770 1952873 D PFAM: OmpA family; flagellar motor protein 1951770..1952873 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791363 YP_005199857.1 CDS Rahaq2_1850 NC_016818.1 1952904 1954946 D PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; CheY binding; Hpt domain; chemotaxis protein histidine kinase-like protein 1952904..1954946 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791364 YP_005199858.1 CDS Rahaq2_1851 NC_016818.1 1955030 1955527 D PFAM: CheW-like domain; chemotaxis signal transduction protein 1955030..1955527 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791365 YP_005199859.1 CDS Rahaq2_1852 NC_016818.1 1957357 1957848 D PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector 1957357..1957848 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791366 YP_005199860.1 CDS Rahaq2_1853 NC_016818.1 1957861 1958217 D hypothetical protein 1957861..1958217 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791367 YP_005199861.1 CDS Rahaq2_1854 NC_016818.1 1958214 1958654 D hypothetical protein 1958214..1958654 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791368 YP_005199862.1 CDS Rahaq2_1856 NC_016818.1 1959327 1959716 D hypothetical protein 1959327..1959716 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791370 YP_005199863.1 CDS Rahaq2_1857 NC_016818.1 1959713 1959925 D putative transcriptional regulator 1959713..1959925 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793974 YP_005199864.1 CDS Rahaq2_1858 NC_016818.1 1960003 1960509 D hypothetical protein 1960003..1960509 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793975 YP_005199865.1 CDS Rahaq2_1859 NC_016818.1 1960536 1961336 D PFAM: Integrase core domain; transposase 1960536..1961336 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791371 YP_005199866.1 CDS Rahaq2_1860 NC_016818.1 1962901 1963878 D PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1; CRISPR-associated endonuclease Cas1 1962901..1963878 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791372 YP_005199867.1 CDS Rahaq2_1861 NC_016818.1 1963875 1967123 D TIGRFAM: CRISPR-associated helicase Cas3, subtype I-F/YPEST; CRISPR-associated helicase Cas3, subtype I-F/YPEST 1963875..1967123 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791373 YP_005199868.1 CDS Rahaq2_1862 NC_016818.1 1967137 1968471 D PFAM: CRISPR-associated protein (Cas_Csy1); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy1; CRISPR type I-F/YPEST-associated protein Csy1 1967137..1968471 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791374 YP_005199869.1 CDS Rahaq2_1863 NC_016818.1 1968468 1969421 D PFAM: CRISPR-associated protein (Cas_Csy2); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy2; CRISPR type I-F/YPEST-associated protein Csy2 1968468..1969421 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791375 YP_005199870.1 CDS Rahaq2_1864 NC_016818.1 1969444 1970463 D PFAM: CRISPR-associated protein (Cas_Csy3); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy3; CRISPR type I-F/YPEST-associated protein Csy3 1969444..1970463 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791376 YP_005199871.1 CDS Rahaq2_1865 NC_016818.1 1970473 1971027 D PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST; CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST 1970473..1971027 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791377 YP_005199872.1 CDS Rahaq2_1866 NC_016818.1 1971465 1971863 D hypothetical protein 1971465..1971863 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791378 YP_005199873.1 CDS Rahaq2_1867 NC_016818.1 1973603 1974919 R hypothetical protein complement(1973603..1974919) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791379 YP_005199874.1 CDS Rahaq2_1868 NC_016818.1 1974974 1975348 R hypothetical protein complement(1974974..1975348) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791380 YP_005199875.1 CDS Rahaq2_1869 NC_016818.1 1975341 1975658 R manually curated; hypothetical protein complement(1975341..1975658) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791381 YP_005199876.1 CDS Rahaq2_1870 NC_016818.1 1976077 1977090 R PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family; transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain complement(1976077..1977090) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793976 YP_005199877.1 CDS Rahaq2_1871 NC_016818.1 1977205 1978680 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; arabinose efflux permease family protein 1977205..1978680 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791382 YP_005199878.1 CDS Rahaq2_1872 NC_016818.1 1978879 1979175 D hypothetical protein 1978879..1979175 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791383 YP_005199879.1 CDS Rahaq2_1873 NC_016818.1 1979184 1979777 D hypothetical protein 1979184..1979777 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791384 YP_005199880.1 CDS Rahaq2_1874 NC_016818.1 1979877 1981571 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue; methyl-accepting chemotaxis protein 1979877..1981571 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791385 YP_005199881.1 CDS Rahaq2_1875 NC_016818.1 1981693 1983363 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue; methyl-accepting chemotaxis protein 1981693..1983363 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793977 YP_005199882.1 CDS Rahaq2_1876 NC_016818.1 1983426 1984298 D PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; methylase of chemotaxis methyl-accepting protein 1983426..1984298 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791386 YP_005199883.1 CDS Rahaq2_1877 NC_016818.1 1984298 1985347 D PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 1984298..1985347 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791387 YP_005199884.1 CDS Rahaq2_1878 NC_016818.1 1985394 1985783 D PFAM: Response regulator receiver domain; response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains 1985394..1985783 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791388 YP_005199885.1 CDS Rahaq2_1879 NC_016818.1 1985794 1986438 D PFAM: Chemotaxis phosphatase, CheZ; chemotaxis protein 1985794..1986438 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791389 YP_005199886.1 CDS Rahaq2_1880 NC_016818.1 1986650 1987804 D PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 1986650..1987804 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791390 YP_005199887.1 CDS Rahaq2_1881 NC_016818.1 1987797 1989881 D PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 1987797..1989881 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791391 YP_005199888.1 CDS Rahaq2_1882 NC_016818.1 1989883 1990299 D PFAM: Flagellar protein FlhE; Flagellar protein FlhE 1989883..1990299 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791392 YP_005199889.1 CDS Rahaq2_1884 NC_016818.1 1990802 1991203 D hypothetical protein 1990802..1991203 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791394 YP_005199890.1 CDS Rahaq2_1886 NC_016818.1 1991739 1992176 R PFAM: FlgN protein; flagellar biosynthesis/type III secretory pathway chaperone complement(1991739..1992176) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791395 YP_005199891.1 CDS Rahaq2_1887 NC_016818.1 1992226 1992528 R PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; flagellar biosynthesis anti-sigma factor FlgM complement(1992226..1992528) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791396 YP_005199892.1 CDS Rahaq2_1888 NC_016818.1 1992689 1993465 R PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA; flagella basal body P-ring formation protein FlgA complement(1992689..1993465) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791397 YP_005199893.1 CDS Rahaq2_1889 NC_016818.1 1993579 1993989 D PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 1993579..1993989 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791398 YP_005199894.1 CDS Rahaq2_1890 NC_016818.1 1993996 1994400 D PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 1993996..1994400 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791399 YP_005199895.1 CDS Rahaq2_1891 NC_016818.1 1994412 1995116 D PFAM: Flagellar hook capping protein; flagellar hook capping protein 1994412..1995116 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791400 YP_005199896.1 CDS Rahaq2_1892 NC_016818.1 1995192 1996436 D PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar hook-basal body protein 1995192..1996436 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791401 YP_005199897.1 CDS Rahaq2_1893 NC_016818.1 1996471 1997226 D PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar hook-basal body protein 1996471..1997226 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791402 YP_005199898.1 CDS Rahaq2_1894 NC_016818.1 1997248 1998030 D PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG 1997248..1998030 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791403 YP_005199899.1 CDS Rahaq2_1895 NC_016818.1 1998131 1998862 D PFAM: Flagellar L-ring protein; flagellar basal body L-ring protein 1998131..1998862 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791404 YP_005199900.1 CDS Rahaq2_1896 NC_016818.1 1998873 1999979 D PFAM: Flagellar P-ring protein; flagellar basal-body P-ring protein 1998873..1999979 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791405 YP_005199901.1 CDS Rahaq2_1897 NC_016818.1 1999979 2000929 D PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; flagellar rod assembly protein/muramidase FlgJ 1999979..2000929 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793979 YP_005199902.1 CDS Rahaq2_1898 NC_016818.1 2001070 2002722 D PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 2001070..2002722 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793980 YP_005199903.1 CDS Rahaq2_1899 NC_016818.1 2002750 2003712 D PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; flagellar hook-associated protein 3 2002750..2003712 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791406 YP_005199904.1 CDS Rahaq2_1900 NC_016818.1 2004026 2004721 R PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; hypothetical protein complement(2004026..2004721) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791407 YP_005199905.1 CDS Rahaq2_1901 NC_016818.1 2004714 2005118 R PFAM: LrgA family; putative effector of murein hydrolase LrgA complement(2004714..2005118) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791408 YP_005199906.1 CDS Rahaq2_1902 NC_016818.1 2005455 2005961 D hypothetical protein 2005455..2005961 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791409 YP_005199907.1 CDS Rahaq2_1903 NC_016818.1 2005988 2006788 D PFAM: Integrase core domain; transposase 2005988..2006788 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791410 YP_005199908.1 CDS Rahaq2_1904 NC_016818.1 2006905 2007750 R PFAM: ABC transporter; polar amino acid ABC transporter ATPase complement(2006905..2007750) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791411 YP_005199909.1 CDS Rahaq2_1905 NC_016818.1 2007766 2008680 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease complement(2007766..2008680) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791412 YP_005199910.1 CDS Rahaq2_1906 NC_016818.1 2008696 2009211 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(2008696..2009211) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791413 YP_005199911.1 CDS Rahaq2_1907 NC_016818.1 2009227 2010159 R PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system complement(2009227..2010159) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791414 YP_005199912.1 CDS Rahaq2_1908 NC_016818.1 2010361 2011545 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase complement(2010361..2011545) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791415 YP_005199913.1 CDS Rahaq2_1909 NC_016818.1 2011776 2012762 D PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; luciferase family oxidoreductase 2011776..2012762 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791416 YP_005199914.1 CDS Rahaq2_1910 NC_016818.1 2012772 2014109 D PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase 2012772..2014109 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793981 YP_005199915.1 CDS Rahaq2_1911 NC_016818.1 2014263 2015240 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family; putative quinone oxidoreductase, YhdH/YhfP family 2014263..2015240 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791417 YP_005199916.1 CDS Rahaq2_1912 NC_016818.1 2015433 2016404 D PFAM: CheW-like domain; Response regulator receiver domain; chemotaxis signal transduction protein 2015433..2016404 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791418 YP_005199917.1 CDS Rahaq2_1913 NC_016818.1 2016722 2017504 D PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase; alpha/beta hydrolase 2016722..2017504 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791419 YP_005199918.1 CDS Rahaq2_1914 NC_016818.1 2017612 2018175 D PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase 2017612..2018175 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791420 YP_005199919.1 CDS Rahaq2_1915 NC_016818.1 2018221 2018547 D hypothetical protein 2018221..2018547 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791421 YP_005199920.1 CDS Rahaq2_1916 NC_016818.1 2018558 2019394 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 2018558..2019394 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791422 YP_005199921.1 CDS Rahaq2_1917 NC_016818.1 2019589 2020803 D PFAM: Acyltransferase family; putative acyltransferase 2019589..2020803 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791423 YP_005199922.1 CDS Rahaq2_1918 NC_016818.1 2020966 2021853 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2020966..2021853) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791424 YP_005199923.1 CDS Rahaq2_1919 NC_016818.1 2022320 2023747 D PFAM: MmgE/PrpD family; TIGRFAM: 2-methylcitrate dehydratase; manually curated; 2-methylcitrate dehydratase 2022320..2023747 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791425 YP_005199924.1 CDS Rahaq2_1920 NC_016818.1 2023796 2024938 D hypothetical protein 2023796..2024938 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791426 YP_005199925.1 CDS Rahaq2_1921 NC_016818.1 2024935 2025915 D hypothetical protein 2024935..2025915 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791427 YP_005199926.1 CDS Rahaq2_1922 NC_016818.1 2025944 2027326 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 2025944..2027326 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791428 YP_005199927.1 CDS Rahaq2_1923 NC_016818.1 2027418 2028335 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; multidrug resistance efflux pump complement(2027418..2028335) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791429 YP_005199928.1 CDS Rahaq2_1924 NC_016818.1 2028332 2028547 R PFAM: Protein of unknown function (DUF1656); hypothetical protein complement(2028332..2028547) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791430 YP_005199929.1 CDS Rahaq2_1925 NC_016818.1 2028537 2030561 R PFAM: Fusaric acid resistance protein family; hypothetical protein complement(2028537..2030561) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791431 YP_005199930.1 CDS Rahaq2_1926 NC_016818.1 2030687 2031472 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; DNA-binding domain-containing protein 2030687..2031472 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791432 YP_005199931.1 CDS Rahaq2_1927 NC_016818.1 2031700 2032725 D PFAM: Luciferase-like monooxygenase; F420-dependent methylene-tetrahydromethanopterin reductase 2031700..2032725 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791433 YP_005199932.1 CDS Rahaq2_1928 NC_016818.1 2032987 2035197 D PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; catalase/peroxidase HPI 2032987..2035197 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791434 YP_005199933.1 CDS Rahaq2_1929 NC_016818.1 2035257 2036657 R PFAM: FAD binding domain; FAD/FMN-dependent dehydrogenase complement(2035257..2036657) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791435 YP_005199934.1 CDS Rahaq2_1930 NC_016818.1 2036685 2037500 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2036685..2037500) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791436 YP_005199935.1 CDS Rahaq2_1931 NC_016818.1 2037505 2038332 R PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase complement(2037505..2038332) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791437 YP_005199936.1 CDS Rahaq2_1932 NC_016818.1 2038329 2039312 R PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2038329..2039312) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791438 YP_005199937.1 CDS Rahaq2_1933 NC_016818.1 2039326 2040207 R PFAM: Creatinine amidohydrolase; amidase complement(2039326..2040207) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791439 YP_005199938.1 CDS Rahaq2_1934 NC_016818.1 2040237 2040698 R PFAM: Endoribonuclease L-PSP; putative translation initiation inhibitor, yjgF family complement(2040237..2040698) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791440 YP_005199939.1 CDS Rahaq2_1935 NC_016818.1 2040688 2041968 R cytosine deaminase complement(2040688..2041968) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791441 YP_005199940.1 CDS Rahaq2_1936 NC_016818.1 2041989 2042963 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; flavodoxin reductase family protein complement(2041989..2042963) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791442 YP_005199941.1 CDS Rahaq2_1937 NC_016818.1 2043177 2044100 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2043177..2044100 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791443 YP_005199942.1 CDS Rahaq2_1938 NC_016818.1 2044362 2045351 D PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2044362..2045351 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791444 YP_005199943.1 CDS Rahaq2_1939 NC_016818.1 2045363 2046790 D PFAM: Amidohydrolase family; cytosine deaminase 2045363..2046790 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791445 YP_005199944.1 CDS Rahaq2_1940 NC_016818.1 2046818 2047822 D PFAM: 2OG-Fe(II) oxygenase superfamily; dioxygenase, isopenicillin N synthase 2046818..2047822 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791446 YP_005199945.1 CDS Rahaq2_1941 NC_016818.1 2047882 2048070 R hypothetical protein complement(2047882..2048070) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793982 YP_005199946.1 CDS Rahaq2_1942 NC_016818.1 2048295 2048834 D PFAM: Uncharacterized protein conserved in bacteria (DUF2058); hypothetical protein 2048295..2048834 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791447 YP_005199947.1 CDS Rahaq2_1943 NC_016818.1 2048890 2049798 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2048890..2049798) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791448 YP_005199948.1 CDS Rahaq2_1944 NC_016818.1 2049934 2050707 R PFAM: short chain dehydrogenase; dehydrogenase complement(2049934..2050707) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791449 YP_005199949.1 CDS Rahaq2_1945 NC_016818.1 2050825 2051214 R PFAM: HxlR-like helix-turn-helix; putative transcriptional regulator complement(2050825..2051214) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791450 YP_005199950.1 CDS Rahaq2_1946 NC_016818.1 2051327 2052061 D PFAM: short chain dehydrogenase; dehydrogenase 2051327..2052061 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791451 YP_005199951.1 CDS Rahaq2_1947 NC_016818.1 2052131 2052730 D PFAM: NADP oxidoreductase coenzyme F420-dependent; putative dinucleotide-binding enzyme 2052131..2052730 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791452 YP_005199952.1 CDS Rahaq2_1948 NC_016818.1 2052798 2053688 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(2052798..2053688) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791453 YP_005199953.1 CDS Rahaq2_1949 NC_016818.1 2053918 2055114 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 2053918..2055114 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791454 YP_005199954.1 CDS Rahaq2_1950 NC_016818.1 2055125 2056153 D PFAM: Dienelactone hydrolase family; alpha/beta superfamily hydrolase 2055125..2056153 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791455 YP_005199955.1 CDS Rahaq2_1951 NC_016818.1 2056252 2056569 R hypothetical protein complement(2056252..2056569) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791456 YP_005199956.1 CDS Rahaq2_1953 NC_016818.1 2058172 2059263 D PFAM: Prolyl oligopeptidase family; putative dienelactone hydrolase 2058172..2059263 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793983 YP_005199957.1 CDS Rahaq2_1954 NC_016818.1 2059169 2060206 R DNA-binding domain-containing protein complement(2059169..2060206) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791458 YP_005199958.1 CDS Rahaq2_1955 NC_016818.1 2060673 2062820 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2060673..2062820 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791459 YP_005199959.1 CDS Rahaq2_1956 NC_016818.1 2062804 2063571 R PFAM: Ferric iron reductase FhuF-like transporter; FhuF 2Fe-2S C-terminal domain; TIGRFAM: siderophore-iron reductase FhuF; siderophore-iron reductase FhuF complement(2062804..2063571) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793984 YP_005199960.1 CDS Rahaq2_1957 NC_016818.1 2063573 2065567 R PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease complement(2063573..2065567) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791460 YP_005199961.1 CDS Rahaq2_1958 NC_016818.1 2065564 2066445 R PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein complement(2065564..2066445) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793985 YP_005199962.1 CDS Rahaq2_1959 NC_016818.1 2066828 2067001 D hypothetical protein 2066828..2067001 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791461 YP_005199963.1 CDS Rahaq2_1960 NC_016818.1 2067332 2067889 D PFAM: OsmC-like protein; putative redox protein, regulator of disulfide bond formation 2067332..2067889 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791462 YP_005199964.1 CDS Rahaq2_1961 NC_016818.1 2068073 2068642 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 2068073..2068642 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791463 YP_005199965.1 CDS Rahaq2_1962 NC_016818.1 2068659 2068997 D PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; alkylhydroperoxidase 2068659..2068997 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791464 YP_005199966.1 CDS Rahaq2_1963 NC_016818.1 2069028 2069357 R PFAM: Thioredoxin; thioredoxin domain-containing protein complement(2069028..2069357) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791465 YP_005199967.1 CDS Rahaq2_1964 NC_016818.1 2069649 2070491 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 2069649..2070491 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791466 YP_005199968.1 CDS Rahaq2_1965 NC_016818.1 2070475 2071038 R PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family; Raf kinase inhibitor-like protein, YbhB/YbcL family complement(2070475..2071038) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793986 YP_005199969.1 CDS Rahaq2_1966 NC_016818.1 2071407 2072513 D PFAM: NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase 2071407..2072513 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791467 YP_005199970.1 CDS Rahaq2_1967 NC_016818.1 2072595 2073296 D PFAM: DSBA-like thioredoxin domain; putative dithiol-disulfide isomerase involved in polyketide biosynthesis 2072595..2073296 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791468 YP_005199971.1 CDS Rahaq2_1968 NC_016818.1 2073359 2074132 D PFAM: short chain dehydrogenase; dehydrogenase 2073359..2074132 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793987 YP_005199972.1 CDS Rahaq2_1969 NC_016818.1 2074220 2074972 D PFAM: Prolyl oligopeptidase family; prolyl oligopeptidase family protein 2074220..2074972 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791469 YP_005199973.1 CDS Rahaq2_1970 NC_016818.1 2075217 2075711 R hypothetical protein complement(2075217..2075711) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793988 YP_005199974.1 CDS Rahaq2_1971 NC_016818.1 2075899 2076747 D PFAM: EamA-like transporter family; putative permease, DMT superfamily 2075899..2076747 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791470 YP_005199975.1 CDS Rahaq2_1972 NC_016818.1 2076878 2078101 D PFAM: Aminotransferase class I and II; bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 2076878..2078101 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791471 YP_005199976.1 CDS Rahaq2_1973 NC_016818.1 2078163 2078924 D protein-disulfide isomerase 2078163..2078924 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791472 YP_005199977.1 CDS Rahaq2_1974 NC_016818.1 2079149 2079460 D hypothetical protein 2079149..2079460 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791473 YP_005199978.1 CDS Rahaq2_1975 NC_016818.1 2079659 2080627 D PFAM: Putative sugar-binding domain; transcriptional regulator with sigma factor-related N-terminal domain 2079659..2080627 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791474 YP_005199979.1 CDS Rahaq2_1976 NC_016818.1 2081047 2081496 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) 2081047..2081496 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791475 YP_005199980.1 CDS Rahaq2_1977 NC_016818.1 2081515 2081808 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; PTS system galactitol-specific transporter subunit IIB 2081515..2081808 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793989 YP_005199981.1 CDS Rahaq2_1978 NC_016818.1 2081833 2083086 D PFAM: PTS system sugar-specific permease component; phosphotransferase system, galactitol-specific IIC component 2081833..2083086 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791476 YP_005199982.1 CDS Rahaq2_1979 NC_016818.1 2083111 2083755 D PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 2083111..2083755 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791477 YP_005199983.1 CDS Rahaq2_1980 NC_016818.1 2083865 2084617 D PFAM: short chain dehydrogenase; dehydrogenase 2083865..2084617 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793990 YP_005199984.1 CDS Rahaq2_1981 NC_016818.1 2084633 2085193 D PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase; putative sugar phosphate isomerase involved in capsule formation 2084633..2085193 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791478 YP_005199985.1 CDS Rahaq2_1982 NC_016818.1 2085416 2086924 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(2085416..2086924) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791479 YP_005199986.1 CDS Rahaq2_1983 NC_016818.1 2086947 2087927 R PFAM: family; sugar ABC transporter periplasmic protein complement(2086947..2087927) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791480 YP_005199987.1 CDS Rahaq2_1984 NC_016818.1 2087969 2088994 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(2087969..2088994) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791481 YP_005199988.1 CDS Rahaq2_1985 NC_016818.1 2088991 2090439 R PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase; D-xylulose kinase complement(2088991..2090439) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791482 YP_005199989.1 CDS Rahaq2_1986 NC_016818.1 2091041 2091961 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(2091041..2091961) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791483 YP_005199990.1 CDS Rahaq2_1987 NC_016818.1 2092103 2092492 D PFAM: Endoribonuclease L-PSP; putative translation initiation inhibitor, yjgF family 2092103..2092492 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791484 YP_005199991.1 CDS Rahaq2_1988 NC_016818.1 2092642 2093601 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent oxidoreductase 2092642..2093601 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791485 YP_005199992.1 CDS Rahaq2_1989 NC_016818.1 2093776 2094690 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(2093776..2094690) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791486 YP_005199993.1 CDS Rahaq2_1990 NC_016818.1 2094816 2095562 D PFAM: short chain dehydrogenase; dehydrogenase 2094816..2095562 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791487 YP_005199994.1 CDS Rahaq2_1991 NC_016818.1 2095642 2096315 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; manually curated; glutathione S-transferase join(2095642..2095761,2095761..2096315) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791488 YP_005199995.1 CDS Rahaq2_1992 NC_016818.1 2096715 2097632 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(2096715..2097632) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791489 YP_005199996.1 CDS Rahaq2_1993 NC_016818.1 2097731 2098798 D PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein 2097731..2098798 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791490 YP_005199997.1 CDS Rahaq2_1994 NC_016818.1 2099023 2099874 R PFAM: SMP-30/Gluconolaconase/LRE-like region; gluconolactonase complement(2099023..2099874) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791491 YP_005199998.1 CDS Rahaq2_1995 NC_016818.1 2099962 2100435 R PFAM: Protein of unknown function, DUF606; hypothetical protein complement(2099962..2100435) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791492 YP_005199999.1 CDS Rahaq2_1996 NC_016818.1 2100450 2101847 R PFAM: Amidohydrolase family; cytosine deaminase complement(2100450..2101847) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791493 YP_005200000.1 CDS Rahaq2_1997 NC_016818.1 2101978 2102895 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2101978..2102895 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791494 YP_005200001.1 CDS Rahaq2_1998 NC_016818.1 2102989 2104179 R PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter; cyanate permease complement(2102989..2104179) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791495 YP_005200002.1 CDS Rahaq2_1999 NC_016818.1 2104267 2105061 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; DNA-binding domain-containing protein 2104267..2105061 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791496 YP_005200003.1 CDS Rahaq2_2000 NC_016818.1 2105291 2106388 R PFAM: NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase complement(2105291..2106388) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791497 YP_005200004.1 CDS Rahaq2_2001 NC_016818.1 2106508 2107437 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2106508..2107437 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791498 YP_005200005.1 CDS Rahaq2_2002 NC_016818.1 2107420 2107578 R hypothetical protein complement(2107420..2107578) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791499 YP_005200006.1 CDS Rahaq2_2003 NC_016818.1 2107805 2108734 R PFAM: alpha/beta hydrolase fold; esterase/lipase complement(2107805..2108734) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793991 YP_005200007.1 CDS Rahaq2_2004 NC_016818.1 2108856 2109764 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2108856..2109764 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791500 YP_005200008.1 CDS Rahaq2_2005 NC_016818.1 2110044 2110664 D PFAM: Phosphoglycerate mutase family; manually curated; fructose-2,6-bisphosphatase 2110044..2110664 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791501 YP_005200009.1 CDS Rahaq2_2006 NC_016818.1 2110930 2112198 R PFAM: Phage integrase family; Integrase complement(2110930..2112198) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793992 YP_005200010.1 CDS Rahaq2_2008 NC_016818.1 2112865 2113737 D PFAM: Helix-turn-helix domain, rpiR family; transcriptional regulator 2112865..2113737 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791503 YP_005200011.1 CDS Rahaq2_2009 NC_016818.1 2113774 2114361 D PFAM: D-ala-D-ala dipeptidase; D-alanyl-D-alanine dipeptidase 2113774..2114361 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793993 YP_005200012.1 CDS Rahaq2_2010 NC_016818.1 2114409 2115989 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 2114409..2115989 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791504 YP_005200013.1 CDS Rahaq2_2011 NC_016818.1 2116051 2117067 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2116051..2117067 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791505 YP_005200014.1 CDS Rahaq2_2012 NC_016818.1 2117072 2117983 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2117072..2117983 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791506 YP_005200015.1 CDS Rahaq2_2013 NC_016818.1 2117985 2119013 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 2117985..2119013 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791507 YP_005200016.1 CDS Rahaq2_2014 NC_016818.1 2119013 2119966 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 2119013..2119966 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791508 YP_005200017.1 CDS Rahaq2_2015 NC_016818.1 2119994 2120833 R PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(2119994..2120833) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791509 YP_005200018.1 CDS Rahaq2_2016 NC_016818.1 2120934 2121503 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 2120934..2121503 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791510 YP_005200019.1 CDS Rahaq2_2017 NC_016818.1 2121572 2122501 R PFAM: ROK family; transcriptional regulator/sugar kinase complement(2121572..2122501) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791511 YP_005200020.1 CDS Rahaq2_2018 NC_016818.1 2122498 2123364 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2122498..2123364) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791512 YP_005200021.1 CDS Rahaq2_2019 NC_016818.1 2123364 2124284 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2123364..2124284) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791513 YP_005200022.1 CDS Rahaq2_2020 NC_016818.1 2124312 2125856 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(2124312..2125856) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791514 YP_005200023.1 CDS Rahaq2_2021 NC_016818.1 2126092 2127231 D PFAM: ROK family; transcriptional regulator/sugar kinase 2126092..2127231 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793994 YP_005200024.1 CDS Rahaq2_2022 NC_016818.1 2127244 2128677 D PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); hypothetical protein 2127244..2128677 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791515 YP_005200025.1 CDS Rahaq2_2023 NC_016818.1 2128679 2130511 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain 2128679..2130511 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791516 YP_005200026.1 CDS Rahaq2_2025 NC_016818.1 2130913 2131761 R PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase complement(2130913..2131761) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791518 YP_005200027.1 CDS Rahaq2_2026 NC_016818.1 2131805 2132269 R PFAM: SEC-C motif; hypothetical protein complement(2131805..2132269) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791519 YP_005200028.1 CDS Rahaq2_2027 NC_016818.1 2132418 2133329 D PFAM: Patatin-like phospholipase; putative esterase of the alpha-beta hydrolase superfamily 2132418..2133329 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791520 YP_005200029.1 CDS Rahaq2_2028 NC_016818.1 2133426 2134439 D PFAM: Response regulator receiver domain; CheY-like receiver domain-containing protein 2133426..2134439 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791521 YP_005200030.1 CDS Rahaq2_2029 NC_016818.1 2134655 2135998 D PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 2134655..2135998 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791522 YP_005200031.1 CDS Rahaq2_2030 NC_016818.1 2136008 2137015 D PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 2136008..2137015 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791523 YP_005200032.1 CDS Rahaq2_2031 NC_016818.1 2137204 2137611 R PFAM: H-NS histone family; DNA-binding protein H-NS complement(2137204..2137611) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793995 YP_005200033.1 CDS Rahaq2_2032 NC_016818.1 2138236 2138850 D PFAM: Thymidine kinase; thymidine kinase 2138236..2138850 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791524 YP_005200034.1 CDS Rahaq2_2033 NC_016818.1 2138963 2141632 R PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; alcohol dehydrogenase complement(2138963..2141632) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791525 YP_005200035.1 CDS Rahaq2_2034 NC_016818.1 2142165 2142809 D PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; membrane protein, MarC family 2142165..2142809 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793996 YP_005200036.1 CDS Rahaq2_2035 NC_016818.1 2143475 2143615 D hypothetical protein 2143475..2143615 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791526 YP_005200037.1 CDS Rahaq2_2036 NC_016818.1 2143991 2145631 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 2143991..2145631 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791527 YP_005200038.1 CDS Rahaq2_2037 NC_016818.1 2145818 2146738 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2145818..2146738 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791528 YP_005200039.1 CDS Rahaq2_2038 NC_016818.1 2146754 2147662 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2146754..2147662 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791529 YP_005200040.1 CDS Rahaq2_2039 NC_016818.1 2147674 2148699 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 2147674..2148699 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791530 YP_005200041.1 CDS Rahaq2_2040 NC_016818.1 2148696 2149733 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 2148696..2149733 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791531 YP_005200042.1 CDS Rahaq2_2041 NC_016818.1 2149812 2150135 R PFAM: Protein of unknown function, DUF440; hypothetical protein complement(2149812..2150135) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791532 YP_005200043.1 CDS Rahaq2_2042 NC_016818.1 2150216 2151676 R PFAM: Phospholipase D Active site motif; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase complement(2150216..2151676) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791533 YP_005200044.1 CDS Rahaq2_2043 NC_016818.1 2151956 2152138 D hypothetical protein 2151956..2152138 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791534 YP_005200045.1 CDS Rahaq2_2044 NC_016818.1 2152139 2152300 R hypothetical protein complement(2152139..2152300) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791535 YP_005200046.1 CDS Rahaq2_2045 NC_016818.1 2152417 2152707 R hypothetical protein complement(2152417..2152707) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793997 YP_005200047.1 CDS Rahaq2_2046 NC_016818.1 2152871 2153167 R PFAM: YCII-related domain; hypothetical protein complement(2152871..2153167) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791536 YP_005200048.1 CDS Rahaq2_2047 NC_016818.1 2153381 2154112 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB family protein 2153381..2154112 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791537 YP_005200049.1 CDS Rahaq2_2048 NC_016818.1 2154214 2154654 R PFAM: Thioesterase superfamily; acyl-CoA hydrolase complement(2154214..2154654) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791538 YP_005200050.1 CDS Rahaq2_2049 NC_016818.1 2154728 2155267 R PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A; intracellular septation protein A complement(2154728..2155267) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791539 YP_005200051.1 CDS Rahaq2_2050 NC_016818.1 2155367 2156122 R PFAM: Uncharacterised protein family (UPF0259); hypothetical protein complement(2155367..2156122) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791540 YP_005200052.1 CDS Rahaq2_2051 NC_016818.1 2156236 2156613 R PFAM: Uncharacterised protein family (UPF0153); putative Fe-S oxidoreductase complement(2156236..2156613) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791541 YP_005200053.1 CDS Rahaq2_2052 NC_016818.1 2156905 2157537 D PFAM: OmpW family; outer membrane protein W 2156905..2157537 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791542 YP_005200054.1 CDS Rahaq2_2053 NC_016818.1 2157608 2157922 R PFAM: Putative phospholipid-binding domain; putative periplasmic or secreted lipoprotein complement(2157608..2157922) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791543 YP_005200055.1 CDS Rahaq2_2054 NC_016818.1 2158139 2158948 R PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha complement(2158139..2158948) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791544 YP_005200056.1 CDS Rahaq2_2055 NC_016818.1 2158948 2160138 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta complement(2158948..2160138) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791545 YP_005200057.1 CDS Rahaq2_2056 NC_016818.1 2160183 2161547 R PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Indole-3-glycerol phosphate synthase complement(2160183..2161547) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791546 YP_005200058.1 CDS Rahaq2_2057 NC_016818.1 2161551 2162564 R PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(2161551..2162564) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791547 YP_005200059.1 CDS Rahaq2_2058 NC_016818.1 2162576 2163154 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase complement(2162576..2163154) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793998 YP_005200060.1 CDS Rahaq2_2059 NC_016818.1 2163156 2164718 R PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, proteobacterial subset; anthranilate synthase component I complement(2163156..2164718) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791548 YP_005200061.1 CDS Rahaq2_2060 NC_016818.1 2165206 2166129 D PFAM: PHP domain; putative metal-dependent phosphoesterase, PHP family 2165206..2166129 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791549 YP_005200062.1 CDS Rahaq2_2061 NC_016818.1 2166164 2166784 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 2166164..2166784 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791550 YP_005200063.1 CDS Rahaq2_2062 NC_016818.1 2166980 2168275 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein 2166980..2168275 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791551 YP_005200064.1 CDS Rahaq2_2063 NC_016818.1 2168412 2168966 D PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; adenosyl cobinamide kinase 2168412..2168966 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791552 YP_005200065.1 CDS Rahaq2_2064 NC_016818.1 2168992 2169744 D PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase; cobalamin 5''-phosphate synthase/cobalamin synthase 2168992..2169744 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791553 YP_005200066.1 CDS Rahaq2_2065 NC_016818.1 2169761 2170357 D PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; alpha-ribazole phosphatase 2169761..2170357 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791554 YP_005200067.1 CDS Rahaq2_2066 NC_016818.1 2170384 2171427 D PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2170384..2171427 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791555 YP_005200068.1 CDS Rahaq2_2067 NC_016818.1 2171444 2172034 R PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; cob(I)alamin adenosyltransferase complement(2171444..2172034) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791556 YP_005200069.1 CDS Rahaq2_2068 NC_016818.1 2172049 2172810 R PFAM: short chain dehydrogenase; dehydrogenase complement(2172049..2172810) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791557 YP_005200070.1 CDS Rahaq2_2069 NC_016818.1 2172837 2173004 D hypothetical protein 2172837..2173004 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793999 YP_005200071.1 CDS Rahaq2_2070 NC_016818.1 2173172 2174215 D PFAM: Peptidase family S49 N-terminal; Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; ClpP class periplasmic serine protease 2173172..2174215 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791558 YP_005200072.1 CDS Rahaq2_2071 NC_016818.1 2174330 2174581 R PFAM: Protein of unknown function (DUF2498); hypothetical protein complement(2174330..2174581) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791559 YP_005200073.1 CDS Rahaq2_2072 NC_016818.1 2175044 2177641 D PFAM: Toprim domain; Topoisomerase I zinc-ribbon-like; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I 2175044..2177641 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794000 YP_005200074.1 CDS Rahaq2_2073 NC_016818.1 2177990 2178964 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2177990..2178964 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791560 YP_005200075.1 CDS Rahaq2_2074 NC_016818.1 2179153 2181825 D PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; aconitate hydratase 1 2179153..2181825 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791561 YP_005200076.1 CDS Rahaq2_2075 NC_016818.1 2181898 2182488 R PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; GTP cyclohydrolase II complement(2181898..2182488) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791562 YP_005200077.1 CDS Rahaq2_2076 NC_016818.1 2182779 2183534 D PFAM: PAP2 superfamily; membrane-associated phospholipid phosphatase 2182779..2183534 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791563 YP_005200078.1 CDS Rahaq2_2077 NC_016818.1 2183803 2184114 D PFAM: Protein of unknown function (DUF1049); hypothetical protein 2183803..2184114 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791564 YP_005200079.1 CDS Rahaq2_2078 NC_016818.1 2184121 2185290 D putative N-acetylglucosaminyl transferase 2184121..2185290 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791565 YP_005200080.1 CDS Rahaq2_2079 NC_016818.1 2185377 2185664 R hypothetical protein complement(2185377..2185664) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791566 YP_005200081.1 CDS Rahaq2_2080 NC_016818.1 2185856 2186584 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; orotidine 5''-phosphate decarboxylase, subfamily 1 2185856..2186584 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791567 YP_005200082.1 CDS Rahaq2_2081 NC_016818.1 2186596 2186925 D PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; translation initiation factor SUI1, putative, prokaryotic 2186596..2186925 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791568 YP_005200083.1 CDS Rahaq2_2082 NC_016818.1 2187155 2187373 R hypothetical protein complement(2187155..2187373) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791569 YP_005200084.1 CDS Rahaq2_2083 NC_016818.1 2187646 2188341 D PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; L-ribulose-5-phosphate 4-epimerase 2187646..2188341 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791570 YP_005200085.1 CDS Rahaq2_2084 NC_016818.1 2188373 2189116 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(2188373..2189116) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791571 YP_005200086.1 CDS Rahaq2_2085 NC_016818.1 2189177 2191609 R PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; pyruvate formate-lyase complement(2189177..2191609) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791572 YP_005200087.1 CDS Rahaq2_2086 NC_016818.1 2191615 2192514 R PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family; glycyl-radical enzyme activator family protein complement(2191615..2192514) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791573 YP_005200088.1 CDS Rahaq2_2087 NC_016818.1 2192663 2193328 D PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; fructose-6-phosphate aldolase, TalC/MipB family 2192663..2193328 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791574 YP_005200089.1 CDS Rahaq2_2088 NC_016818.1 2193588 2194586 D PFAM: 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; 2-keto-3-deoxygluconate transporter 2193588..2194586 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791575 YP_005200090.1 CDS Rahaq2_2089 NC_016818.1 2194719 2196149 R PFAM: Alkaline phosphatase; alkaline phosphatase complement(2194719..2196149) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791576 YP_005200091.1 CDS Rahaq2_2090 NC_016818.1 2196578 2196925 R putative transcriptional regulator complement(2196578..2196925) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791577 YP_005200092.1 CDS Rahaq2_2091 NC_016818.1 2197385 2198110 R PFAM: Pirin; Pirin-like protein complement(2197385..2198110) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791578 YP_005200093.1 CDS Rahaq2_2092 NC_016818.1 2198266 2199162 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2198266..2199162 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791579 YP_005200094.1 CDS Rahaq2_2093 NC_016818.1 2199310 2200077 D PFAM: Phytanoyl-CoA dioxygenase (PhyH); mitomycin antibiotics/polyketide fumonisin biosynthesis protein 2199310..2200077 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791580 YP_005200095.1 CDS Rahaq2_2094 NC_016818.1 2200243 2201091 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 2200243..2201091 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791581 YP_005200096.1 CDS Rahaq2_2095 NC_016818.1 2201354 2202448 D PFAM: ABC transporter; proline/glycine betaine ABC transporter ATPase 2201354..2202448 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791582 YP_005200097.1 CDS Rahaq2_2096 NC_016818.1 2202453 2203103 D PFAM: Binding-protein-dependent transport system inner membrane component; proline/glycine betaine ABC transporter permease 2202453..2203103 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791583 YP_005200098.1 CDS Rahaq2_2097 NC_016818.1 2203100 2203807 D PFAM: Binding-protein-dependent transport system inner membrane component; proline/glycine betaine ABC transporter permease 2203100..2203807 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791584 YP_005200099.1 CDS Rahaq2_2098 NC_016818.1 2203842 2204726 D PFAM: Substrate binding domain of ABC-type glycine betaine transport system; glycine betaine/choline ABC transporter substrate-binding protein 2203842..2204726 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791585 YP_005200100.1 CDS Rahaq2_2099 NC_016818.1 2204723 2206267 D PFAM: Phenylalanine and histidine ammonia-lyase; histidine ammonia-lyase 2204723..2206267 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791586 YP_005200101.1 CDS Rahaq2_2100 NC_016818.1 2206264 2207466 D PFAM: CoA-transferase family III; putative acyl-CoA transferase/carnitine dehydratase 2206264..2207466 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794001 YP_005200102.1 CDS Rahaq2_2101 NC_016818.1 2207482 2208375 D PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase 2207482..2208375 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791587 YP_005200103.1 CDS Rahaq2_2102 NC_016818.1 2208372 2209142 D PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/carnithine racemase 2208372..2209142 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791588 YP_005200104.1 CDS Rahaq2_2103 NC_016818.1 2209211 2209960 D PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial; histidine utilization repressor 2209211..2209960 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794002 YP_005200105.1 CDS Rahaq2_2104 NC_016818.1 2210060 2211118 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent alcohol dehydrogenase 2210060..2211118 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791589 YP_005200106.1 CDS Rahaq2_2105 NC_016818.1 2211168 2212094 R PFAM: EamA-like transporter family; putative permease, DMT superfamily complement(2211168..2212094) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791590 YP_005200107.1 CDS Rahaq2_2106 NC_016818.1 2212091 2212678 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(2212091..2212678) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791591 YP_005200108.1 CDS Rahaq2_2107 NC_016818.1 2212885 2213316 D PFAM: Uncharacterised protein family (UPF0093); hypothetical protein 2212885..2213316 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791592 YP_005200109.1 CDS Rahaq2_2108 NC_016818.1 2213669 2215486 D PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase; 6-phosphogluconate dehydratase 2213669..2215486 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791593 YP_005200110.1 CDS Rahaq2_2109 NC_016818.1 2215617 2216777 D glycosyl transferase family protein 2215617..2216777 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791594 YP_005200111.1 CDS Rahaq2_2110 NC_016818.1 2216785 2217354 D PFAM: SNARE associated Golgi protein; putative membrane-associated protein 2216785..2217354 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791595 YP_005200112.1 CDS Rahaq2_2111 NC_016818.1 2217351 2218028 D PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 2217351..2218028 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791596 YP_005200113.1 CDS Rahaq2_2112 NC_016818.1 2218233 2219255 R PFAM: L,D-transpeptidase catalytic domain; hypothetical protein complement(2218233..2219255) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794003 YP_005200114.1 CDS Rahaq2_2113 NC_016818.1 2219415 2220968 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter complement(2219415..2220968) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791597 YP_005200115.1 CDS Rahaq2_2114 NC_016818.1 2221050 2222174 D PFAM: HlyD family secretion protein; multidrug resistance efflux pump 2221050..2222174 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791598 YP_005200116.1 CDS Rahaq2_2115 NC_016818.1 2222212 2222802 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 2222212..2222802 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794004 YP_005200117.1 CDS Rahaq2_2116 NC_016818.1 2222956 2225238 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2222956..2225238) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791599 YP_005200118.1 CDS Rahaq2_2117 NC_016818.1 2225428 2226111 D PFAM: O-methyltransferase; putative O-methyltransferase 2225428..2226111 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794005 YP_005200119.1 CDS Rahaq2_2118 NC_016818.1 2226118 2228079 R PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase complement(2226118..2228079) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791600 YP_005200120.1 CDS Rahaq2_2119 NC_016818.1 2228174 2228692 R PFAM: Chromate transporter; chromate transport protein ChrA complement(2228174..2228692) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791601 YP_005200121.1 CDS Rahaq2_2120 NC_016818.1 2228692 2229279 R PFAM: Chromate transporter; chromate transport protein ChrA complement(2228692..2229279) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791602 YP_005200122.1 CDS Rahaq2_2121 NC_016818.1 2229409 2230320 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2229409..2230320 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791603 YP_005200123.1 CDS Rahaq2_2122 NC_016818.1 2230317 2230670 R putative transcriptional regulator complement(2230317..2230670) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791604 YP_005200124.1 CDS Rahaq2_2123 NC_016818.1 2230908 2233013 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor EF-G 2230908..2233013 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791605 YP_005200125.1 CDS Rahaq2_2124 NC_016818.1 2233096 2233389 D PFAM: Post-segregation antitoxin CcdA; post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid 2233096..2233389 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791606 YP_005200126.1 CDS Rahaq2_2125 NC_016818.1 2233389 2233700 D PFAM: CcdB protein; CcdB protein 2233389..2233700 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791607 YP_005200127.1 CDS Rahaq2_2126 NC_016818.1 2233737 2234426 R PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; NAD(P)H:quinone oxidoreductase, type IV complement(2233737..2234426) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794006 YP_005200128.1 CDS Rahaq2_2127 NC_016818.1 2234655 2234876 R hypothetical protein complement(2234655..2234876) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791608 YP_005200129.1 CDS Rahaq2_2128 NC_016818.1 2234939 2236201 R PFAM: YadA-like C-terminal region; autotransporter adhesin complement(2234939..2236201) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794007 YP_005200130.1 CDS Rahaq2_2129 NC_016818.1 2236532 2236858 D hypothetical protein 2236532..2236858 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791609 YP_005200131.1 CDS Rahaq2_2130 NC_016818.1 2236958 2237263 R PFAM: EthD protein; TIGRFAM: conserved hypothetical protein; hypothetical protein complement(2236958..2237263) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791610 YP_005200132.1 CDS Rahaq2_2131 NC_016818.1 2237418 2238797 D PFAM: Sodium/hydrogen exchanger family; NhaP-type Na+(K+)/H+ antiporter 2237418..2238797 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794008 YP_005200133.1 CDS Rahaq2_2132 NC_016818.1 2238843 2239628 R PFAM: ABC 3 transport family; Mn2+/Zn2+ ABC transporter permease complement(2238843..2239628) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791611 YP_005200134.1 CDS Rahaq2_2133 NC_016818.1 2239625 2240383 R PFAM: ABC transporter; Mn/Zn ABC transporter ATPase complement(2239625..2240383) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791612 YP_005200135.1 CDS Rahaq2_2134 NC_016818.1 2240479 2241411 D PFAM: Periplasmic solute binding protein family; ABC-type Zn2+ transport system, periplasmic component/surface adhesin 2240479..2241411 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791613 YP_005200136.1 CDS Rahaq2_2135 NC_016818.1 2241432 2242766 D PFAM: Opacity-associated protein A N-terminal motif; Opacity-associated protein A LysM-like domain; Peptidase family M23; metalloendopeptidase-like membrane protein 2241432..2242766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791614 YP_005200137.1 CDS Rahaq2_2136 NC_016818.1 2242860 2243840 D PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2242860..2243840 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791615 YP_005200138.1 CDS Rahaq2_2137 NC_016818.1 2243886 2245106 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(2243886..2245106) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791616 YP_005200139.1 CDS Rahaq2_2138 NC_016818.1 2245189 2247573 R PFAM: Ferric iron reductase FhuF-like transporter; Siderophore biosynthesis protein domain; IucA / IucC family; siderophore synthetase component complement(2245189..2247573) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794009 YP_005200140.1 CDS Rahaq2_2139 NC_016818.1 2247588 2248898 R lysine/ornithine N-monooxygenase complement(2247588..2248898) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791617 YP_005200141.1 CDS Rahaq2_2140 NC_016818.1 2248912 2250480 R PFAM: Pyridoxal-dependent decarboxylase conserved domain; PLP-dependent enzyme, glutamate decarboxylase complement(2248912..2250480) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791618 YP_005200142.1 CDS Rahaq2_2141 NC_016818.1 2251111 2252553 R PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase complement(2251111..2252553) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791619 YP_005200143.1 CDS Rahaq2_2142 NC_016818.1 2252788 2253657 R PFAM: Helix-turn-helix domain, rpiR family; SIS domain; transcriptional regulator complement(2252788..2253657) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791620 YP_005200144.1 CDS Rahaq2_2143 NC_016818.1 2254066 2255541 D PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2254066..2255541 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794010 YP_005200145.1 CDS Rahaq2_2144 NC_016818.1 2255743 2256384 D PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; Entner-Doudoroff aldolase 2255743..2256384 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791621 YP_005200146.1 CDS Rahaq2_2145 NC_016818.1 2256449 2256793 R PFAM: Endoribonuclease L-PSP; putative translation initiation inhibitor, yjgF family complement(2256449..2256793) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791622 YP_005200147.1 CDS Rahaq2_2146 NC_016818.1 2256936 2258849 D PFAM: DEAD_2; DEAD/DEAH box helicase; DNA helicase, Rad3 2256936..2258849 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791623 YP_005200148.1 CDS Rahaq2_2147 NC_016818.1 2259047 2259748 D PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; hypothetical protein 2259047..2259748 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791624 YP_005200149.1 CDS Rahaq2_2148 NC_016818.1 2259811 2260443 D PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family; outer membrane lipoprotein, Slp family 2259811..2260443 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791625 YP_005200150.1 CDS Rahaq2_2149 NC_016818.1 2260764 2262461 D PFAM: AMP-binding enzyme; acyl-CoA synthetase 2260764..2262461 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791626 YP_005200151.1 CDS Rahaq2_2150 NC_016818.1 2262559 2263680 D PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D; ribonuclease D 2262559..2263680 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791627 YP_005200152.1 CDS Rahaq2_2151 NC_016818.1 2264028 2264297 R PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; cell division topological specificity factor MinE complement(2264028..2264297) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791628 YP_005200153.1 CDS Rahaq2_2152 NC_016818.1 2264301 2265113 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD; septum site-determining protein MinD complement(2264301..2265113) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791629 YP_005200154.1 CDS Rahaq2_2153 NC_016818.1 2265138 2265827 R PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC; septum site-determining protein MinC complement(2265138..2265827) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791630 YP_005200155.1 CDS Rahaq2_2154 NC_016818.1 2265964 2266236 D PFAM: YcgL domain; hypothetical protein 2265964..2266236 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791631 YP_005200156.1 CDS Rahaq2_2155 NC_016818.1 2266359 2267534 D TIGRFAM: lytic murein transglycosylase; lytic murein transglycosylase 2266359..2267534 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791632 YP_005200157.1 CDS Rahaq2_2156 NC_016818.1 2267561 2268217 D PFAM: Fumarylacetoacetate (FAA) hydrolase family; 2-keto-4-pentenoate hydratase 2267561..2268217 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791633 YP_005200158.1 CDS Rahaq2_2157 NC_016818.1 2268325 2268774 D PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 2268325..2268774 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791634 YP_005200159.1 CDS Rahaq2_2158 NC_016818.1 2268848 2269189 R PFAM: Sigma-S stabilisation anti-adaptor protein; Sigma-S stabilization anti-adaptor protein complement(2268848..2269189) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791635 YP_005200160.1 CDS Rahaq2_2159 NC_016818.1 2269305 2270414 R PFAM: Domain of unknown function DUF20; putative permease complement(2269305..2270414) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791636 YP_005200161.1 CDS Rahaq2_2160 NC_016818.1 2270937 2271467 R PFAM: Disulfide bond formation protein DsbB; disulfide bond formation protein DsbB complement(2270937..2271467) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791637 YP_005200162.1 CDS Rahaq2_2161 NC_016818.1 2271649 2273226 R PFAM: Bacterial Na+/H+ antiporter B (NhaB); TIGRFAM: Na+/H+ antiporter NhaB; Na+/H+ antiporter NhaB complement(2271649..2273226) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791638 YP_005200163.1 CDS Rahaq2_2162 NC_016818.1 2273471 2274193 D PFAM: FadR C-terminal domain; Bacterial regulatory proteins, gntR family; TIGRFAM: fatty acid metabolism transcriptional regulator FadR; fatty acid metabolism transcriptional regulator FadR 2273471..2274193 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791639 YP_005200164.1 CDS Rahaq2_2163 NC_016818.1 2274260 2275795 R PFAM: SpoVR like protein; hypothetical protein complement(2274260..2275795) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791640 YP_005200165.1 CDS Rahaq2_2164 NC_016818.1 2276049 2276879 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(2276049..2276879) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791641 YP_005200166.1 CDS Rahaq2_2165 NC_016818.1 2277484 2278785 D PFAM: FAD dependent oxidoreductase; glycine/D-amino acid oxidase, deaminating 2277484..2278785 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791642 YP_005200167.1 CDS Rahaq2_2166 NC_016818.1 2278858 2279931 D PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase 2278858..2279931 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794011 YP_005200168.1 CDS Rahaq2_2167 NC_016818.1 2279940 2281145 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; Bcr/CflA family multidrug resistance transporter complement(2279940..2281145) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791643 YP_005200169.1 CDS Rahaq2_2168 NC_016818.1 2281287 2282117 R PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; NAD+ synthetase complement(2281287..2282117) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791644 YP_005200170.1 CDS Rahaq2_2169 NC_016818.1 2282585 2283349 D PFAM: Protein of unknown function, DUF481; putative salt-induced outer membrane protein 2282585..2283349 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794012 YP_005200171.1 CDS Rahaq2_2170 NC_016818.1 2283714 2285438 D PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; hemolysin activation/secretion protein 2283714..2285438 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791645 YP_005200172.1 CDS Rahaq2_2171 NC_016818.1 2285459 2297146 D PFAM: Haemagluttinin repeat; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; adhesin HecA family 20-residue repeat (two copies); filamentous hemagglutinin family N-terminal domain protein 2285459..2297146 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791646 YP_005200173.1 CDS Rahaq2_2172 NC_016818.1 2297149 2297592 D hypothetical protein 2297149..2297592 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794013 YP_005200174.1 CDS Rahaq2_2176 NC_016818.1 2300614 2301051 D hypothetical protein 2300614..2301051 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791650 YP_005200175.1 CDS Rahaq2_2177 NC_016818.1 2301829 2303103 R PFAM: Protein of unknown function (DUF444); hypothetical protein complement(2301829..2303103) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791651 YP_005200176.1 CDS Rahaq2_2178 NC_016818.1 2303138 2305072 R PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain; putative Ser protein kinase complement(2303138..2305072) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791652 YP_005200177.1 CDS Rahaq2_2179 NC_016818.1 2305600 2306349 D PFAM: MltA-interacting protein MipA; outer membrane protein V 2305600..2306349 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791653 YP_005200178.1 CDS Rahaq2_2180 NC_016818.1 2306480 2307334 D PFAM: Aldo/keto reductase family; aldo/keto reductase, diketogulonate reductase 2306480..2307334 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791654 YP_005200179.1 CDS Rahaq2_2181 NC_016818.1 2307416 2308285 R PFAM: Aldose 1-epimerase; aldose 1-epimerase-like enzyme complement(2307416..2308285) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791655 YP_005200180.1 CDS Rahaq2_2182 NC_016818.1 2308452 2309450 R PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I complement(2308452..2309450) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791656 YP_005200181.1 CDS Rahaq2_2183 NC_016818.1 2309801 2310214 D PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 2309801..2310214 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791657 YP_005200182.1 CDS Rahaq2_2184 NC_016818.1 2310309 2310581 D PFAM: Protein of unknown function (DUF1315); hypothetical protein 2310309..2310581 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791658 YP_005200183.1 CDS Rahaq2_2185 NC_016818.1 2310660 2311289 R PFAM: Isochorismatase family; nicotinamidase-like amidase complement(2310660..2311289) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791659 YP_005200184.1 CDS Rahaq2_2186 NC_016818.1 2311302 2312315 R PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; L-asparaginase type I family protein complement(2311302..2312315) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791660 YP_005200185.1 CDS Rahaq2_2187 NC_016818.1 2312464 2314317 R PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 67K type complement(2312464..2314317) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791661 YP_005200186.1 CDS Rahaq2_2188 NC_016818.1 2314497 2315048 D PFAM: Nitroreductase family; nitroreductase 2314497..2315048 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791662 YP_005200187.1 CDS Rahaq2_2189 NC_016818.1 2315272 2317215 D PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; DNA topoisomerase III 2315272..2317215 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794014 YP_005200188.1 CDS Rahaq2_2190 NC_016818.1 2317208 2317522 D PFAM: Protein of unknown function (DUF1496); hypothetical protein 2317208..2317522 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791663 YP_005200189.1 CDS Rahaq2_2191 NC_016818.1 2317609 2318010 R PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; ADP-ribose pyrophosphatase complement(2317609..2318010) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794015 YP_005200190.1 CDS Rahaq2_2192 NC_016818.1 2318010 2318819 R PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); exodeoxyribonuclease III complement(2318010..2318819) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791664 YP_005200191.1 CDS Rahaq2_2193 NC_016818.1 2319075 2320649 D PFAM: Sigma-54 interaction domain; transcriptional regulator of aromatic amino acids metabolism 2319075..2320649 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791665 YP_005200192.1 CDS Rahaq2_2194 NC_016818.1 2320734 2321237 R PFAM: Redoxin; peroxiredoxin complement(2320734..2321237) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791666 YP_005200193.1 CDS Rahaq2_2195 NC_016818.1 2321374 2322351 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; L-alanine-DL-glutamate epimerase-like protein 2321374..2322351 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791667 YP_005200194.1 CDS Rahaq2_2196 NC_016818.1 2322497 2324131 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 2322497..2324131 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791668 YP_005200195.1 CDS Rahaq2_2197 NC_016818.1 2324196 2325398 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(2324196..2325398) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791669 YP_005200196.1 CDS Rahaq2_2198 NC_016818.1 2325511 2326446 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2325511..2326446 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791670 YP_005200197.1 CDS Rahaq2_2199 NC_016818.1 2326526 2327509 D PFAM: CorA-like Mg2+ transporter protein; Mg2+/Co2+ transporter 2326526..2327509 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791671 YP_005200198.1 CDS Rahaq2_2200 NC_016818.1 2327793 2328470 D hypothetical protein 2327793..2328470 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791672 YP_005200199.1 CDS Rahaq2_2201 NC_016818.1 2328530 2329465 R PFAM: PP-loop family; putative ATPase of the PP-loop superfamily implicated in cell cycle control complement(2328530..2329465) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791673 YP_005200200.1 CDS Rahaq2_2203 NC_016818.1 2329922 2330236 D PFAM: Protein of unknown function (DUF1493); hypothetical protein 2329922..2330236 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791675 YP_005200201.1 CDS Rahaq2_2205 NC_016818.1 2331018 2331959 D PFAM: Sulfotransferase family; Sulfotransferase family 2331018..2331959 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791677 YP_005200202.1 CDS Rahaq2_2206 NC_016818.1 2332196 2332429 D PFAM: Bacterial protein of unknown function (DUF903); hypothetical protein 2332196..2332429 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791678 YP_005200203.1 CDS Rahaq2_2207 NC_016818.1 2332462 2332704 D PFAM: Bacterial protein of unknown function (DUF903); hypothetical protein 2332462..2332704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791679 YP_005200204.1 CDS Rahaq2_2208 NC_016818.1 2332845 2333270 D PFAM: NUDIX domain; NTP pyrophosphohydrolase 2332845..2333270 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791680 YP_005200205.1 CDS Rahaq2_2209 NC_016818.1 2333314 2335113 R PFAM: Sodium:solute symporter family; Na+/proline symporter complement(2333314..2335113) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794016 YP_005200206.1 CDS Rahaq2_2210 NC_016818.1 2335212 2335316 D hypothetical protein 2335212..2335316 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791681 YP_005200207.1 CDS Rahaq2_2211 NC_016818.1 2335371 2336705 D PFAM: Alginate lyase; Alginate lyase 2335371..2336705 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791682 YP_005200208.1 CDS Rahaq2_2212 NC_016818.1 2336702 2338840 D PFAM: Heparinase II/III-like protein; Heparinase II/III-like protein 2336702..2338840 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794017 YP_005200209.1 CDS Rahaq2_2213 NC_016818.1 2338851 2339627 D PFAM: short chain dehydrogenase; dehydrogenase 2338851..2339627 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791683 YP_005200210.1 CDS Rahaq2_2214 NC_016818.1 2339728 2340432 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 2339728..2340432 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791684 YP_005200211.1 CDS Rahaq2_2215 NC_016818.1 2340683 2341549 D PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 2340683..2341549 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791685 YP_005200212.1 CDS Rahaq2_2216 NC_016818.1 2341645 2342943 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 2341645..2342943 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794018 YP_005200213.1 CDS Rahaq2_2217 NC_016818.1 2342991 2345648 D PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain; alpha-L-rhamnosidase 2342991..2345648 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791686 YP_005200214.1 CDS Rahaq2_2218 NC_016818.1 2345944 2346771 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 2345944..2346771 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791687 YP_005200215.1 CDS Rahaq2_2219 NC_016818.1 2346796 2347626 D PFAM: ABC transporter; polar amino acid ABC transporter ATPase 2346796..2347626 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791688 YP_005200216.1 CDS Rahaq2_2220 NC_016818.1 2347623 2348396 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 2347623..2348396 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791689 YP_005200217.1 CDS Rahaq2_2221 NC_016818.1 2348386 2349078 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 2348386..2349078 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791690 YP_005200218.1 CDS Rahaq2_2222 NC_016818.1 2349248 2351332 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein complement(2349248..2351332) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791691 YP_005200219.1 CDS Rahaq2_2223 NC_016818.1 2351715 2352464 R hypothetical protein complement(2351715..2352464) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791692 YP_005200220.1 CDS Rahaq2_2224 NC_016818.1 2352478 2354556 R PFAM: Protein of unknown function (DUF3274); hypothetical protein complement(2352478..2354556) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791693 YP_005200221.1 CDS Rahaq2_2225 NC_016818.1 2354651 2355682 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(2354651..2355682) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791694 YP_005200222.1 CDS Rahaq2_2226 NC_016818.1 2355975 2357447 D PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component 2355975..2357447 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791695 YP_005200223.1 CDS Rahaq2_2227 NC_016818.1 2357468 2358898 D PFAM: Glycosyl hydrolase family 1; beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase 2357468..2358898 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791696 YP_005200224.1 CDS Rahaq2_2228 NC_016818.1 2359143 2360237 D PFAM: Cellulase (glycosyl hydrolase family 5); beta-1,4-xylanase 2359143..2360237 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791697 YP_005200225.1 CDS Rahaq2_2229 NC_016818.1 2360215 2360739 R hypothetical protein complement(2360215..2360739) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794019 YP_005200226.1 CDS Rahaq2_2230 NC_016818.1 2361120 2362337 D PFAM: Nitrate and nitrite sensing; ANTAR domain; response regulator with putative antiterminator output domain 2361120..2362337 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791698 YP_005200227.1 CDS Rahaq2_2231 NC_016818.1 2362620 2363882 D nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2362620..2363882 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794020 YP_005200228.1 CDS Rahaq2_2232 NC_016818.1 2363895 2364809 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; nitrate ABC transporter permease 2363895..2364809 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791699 YP_005200229.1 CDS Rahaq2_2233 NC_016818.1 2364819 2365616 D PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; nitrate transport ATP-binding subunits C and D 2364819..2365616 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791700 YP_005200230.1 CDS Rahaq2_2234 NC_016818.1 2365639 2369838 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase [NAD(P)H], large subunit; NAD(P)H-dependent nitrite reductase, large subunit,NAD(P)H-dependent nitrite reductase, small subunit 2365639..2369838 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791701 YP_005200231.1 CDS Rahaq2_2235 NC_016818.1 2369835 2372507 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; anaerobic dehydrogenase, typically selenocysteine-containing 2369835..2372507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791702 YP_005200232.1 CDS Rahaq2_2236 NC_016818.1 2372504 2373406 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2372504..2373406 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791703 YP_005200233.1 CDS Rahaq2_2237 NC_016818.1 2373503 2377033 R PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric complement(2373503..2377033) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791704 YP_005200234.1 CDS Rahaq2_2238 NC_016818.1 2377547 2377828 D PFAM: Domain of unknown function (DUF333); putative hemolysin 2377547..2377828 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791705 YP_005200235.1 CDS Rahaq2_2239 NC_016818.1 2377905 2378327 R PFAM: META domain; heat shock protein complement(2377905..2378327) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794021 YP_005200236.1 CDS Rahaq2_2240 NC_016818.1 2378530 2379633 D PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATPase 2378530..2379633 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794022 YP_005200237.1 CDS Rahaq2_2241 NC_016818.1 2379699 2380979 D PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein 2379699..2380979 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791706 YP_005200238.1 CDS Rahaq2_2242 NC_016818.1 2380997 2381908 D PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease 2380997..2381908 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791707 YP_005200239.1 CDS Rahaq2_2243 NC_016818.1 2381905 2382720 D PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease 2381905..2382720 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791708 YP_005200240.1 CDS Rahaq2_2244 NC_016818.1 2382741 2383670 D PFAM: Calcineurin-like phosphoesterase; putative phosphohydrolase 2382741..2383670 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791709 YP_005200241.1 CDS Rahaq2_2245 NC_016818.1 2383747 2384733 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; lactate dehydrogenase-like oxidoreductase complement(2383747..2384733) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791710 YP_005200242.1 CDS Rahaq2_2246 NC_016818.1 2384976 2387702 D PFAM: Dicarboxylate transport; Dicarboxylate transport 2384976..2387702 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791711 YP_005200243.1 CDS Rahaq2_2247 NC_016818.1 2387699 2387893 D hypothetical protein 2387699..2387893 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791712 YP_005200244.1 CDS Rahaq2_2248 NC_016818.1 2387902 2388270 D PFAM: Protein of unknown function (DUF1318); hypothetical protein 2387902..2388270 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791713 YP_005200245.1 CDS Rahaq2_2249 NC_016818.1 2388393 2389010 R PFAM: Flavodoxin-like fold; acyl carrier protein phosphodiesterase complement(2388393..2389010) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791714 YP_005200246.1 CDS Rahaq2_2250 NC_016818.1 2389309 2393184 D PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA; ATP-dependent helicase HrpA 2389309..2393184 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791715 YP_005200247.1 CDS Rahaq2_2251 NC_016818.1 2393262 2394143 R PFAM: Trypsin; V8-like Glu-specific endopeptidase complement(2393262..2394143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791716 YP_005200248.1 CDS Rahaq2_2252 NC_016818.1 2394483 2394851 R hypothetical protein complement(2394483..2394851) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791717 YP_005200249.1 CDS Rahaq2_2253 NC_016818.1 2395199 2396383 R PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; mannonate dehydratase complement(2395199..2396383) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791718 YP_005200250.1 CDS Rahaq2_2254 NC_016818.1 2396581 2397279 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 2396581..2397279 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791719 YP_005200251.1 CDS Rahaq2_2256 NC_016818.1 2398189 2400528 D PFAM: Bacterial cellulose synthase subunit; cellulose synthase subunit 2398189..2400528 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791721 YP_005200252.1 CDS Rahaq2_2257 NC_016818.1 2400533 2403823 D PFAM: Cellulose synthase operon protein C C-terminus (BCSC_C); Cellulose synthase operon protein C C-terminus (BCSC_C) 2400533..2403823 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791722 YP_005200253.1 CDS Rahaq2_2258 NC_016818.1 2403862 2404038 D hypothetical protein 2403862..2404038 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791723 YP_005200254.1 CDS Rahaq2_2259 NC_016818.1 2404011 2404853 R PFAM: N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(2404011..2404853) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791724 YP_005200255.1 CDS Rahaq2_2260 NC_016818.1 2404853 2406112 R PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase; imidazolonepropionase complement(2404853..2406112) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791725 YP_005200256.1 CDS Rahaq2_2261 NC_016818.1 2406283 2407137 R PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial; histidine utilization repressor complement(2406283..2407137) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791726 YP_005200257.1 CDS Rahaq2_2262 NC_016818.1 2407384 2408757 D PFAM: Amidohydrolase family; TIGRFAM: formiminoglutamate deiminase; formiminoglutamate deiminase 2407384..2408757 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791727 YP_005200258.1 CDS Rahaq2_2263 NC_016818.1 2408754 2409335 D PFAM: HutD; hypothetical protein 2408754..2409335 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791728 YP_005200259.1 CDS Rahaq2_2264 NC_016818.1 2409583 2410563 D PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2409583..2410563 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791729 YP_005200260.1 CDS Rahaq2_2265 NC_016818.1 2410581 2411462 D PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 2410581..2411462 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794023 YP_005200261.1 CDS Rahaq2_2266 NC_016818.1 2411462 2412247 D PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase 2411462..2412247 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791730 YP_005200262.1 CDS Rahaq2_2267 NC_016818.1 2412371 2413921 D PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; histidine ammonia-lyase 2412371..2413921 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794024 YP_005200263.1 CDS Rahaq2_2268 NC_016818.1 2413980 2415668 D PFAM: Urocanase; TIGRFAM: urocanate hydratase; urocanate hydratase 2413980..2415668 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794025 YP_005200264.1 CDS Rahaq2_2269 NC_016818.1 2415841 2417007 D PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 2415841..2417007 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791731 YP_005200265.1 CDS Rahaq2_2270 NC_016818.1 2417004 2418152 D PFAM: FMN-dependent dehydrogenase; alpha-hydroxyacid dehydrogenase 2417004..2418152 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791732 YP_005200266.1 CDS Rahaq2_2271 NC_016818.1 2418234 2419319 D PFAM: Iron-containing alcohol dehydrogenase; glycerol dehydrogenase 2418234..2419319 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791733 YP_005200267.1 CDS Rahaq2_2272 NC_016818.1 2419524 2420030 D hypothetical protein 2419524..2420030 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791734 YP_005200268.1 CDS Rahaq2_2273 NC_016818.1 2420057 2420857 D PFAM: Integrase core domain; transposase 2420057..2420857 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791735 YP_005200269.1 CDS Rahaq2_2274 NC_016818.1 2420994 2421764 R PFAM: short chain dehydrogenase; dehydrogenase complement(2420994..2421764) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791736 YP_005200270.1 CDS Rahaq2_2275 NC_016818.1 2421764 2423086 R hypothetical protein complement(2421764..2423086) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791737 YP_005200271.1 CDS Rahaq2_2276 NC_016818.1 2423089 2424429 R PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase complement(2423089..2424429) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791738 YP_005200272.1 CDS Rahaq2_2277 NC_016818.1 2424446 2425216 R PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase complement(2424446..2425216) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791739 YP_005200273.1 CDS Rahaq2_2278 NC_016818.1 2425216 2426025 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2425216..2426025) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791740 YP_005200274.1 CDS Rahaq2_2279 NC_016818.1 2426022 2427029 R PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2426022..2427029) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794026 YP_005200275.1 CDS Rahaq2_2280 NC_016818.1 2427305 2428285 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2427305..2428285) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794027 YP_005200276.1 CDS Rahaq2_2281 NC_016818.1 2428475 2429902 D PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 2428475..2429902 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791741 YP_005200277.1 CDS Rahaq2_2282 NC_016818.1 2429921 2430793 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 2429921..2430793 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791742 YP_005200278.1 CDS Rahaq2_2283 NC_016818.1 2430807 2431571 D PFAM: ABC transporter; polar amino acid ABC transporter ATPase 2430807..2431571 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791743 YP_005200279.1 CDS Rahaq2_2284 NC_016818.1 2431610 2432431 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 2431610..2432431 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791744 YP_005200280.1 CDS Rahaq2_2285 NC_016818.1 2432453 2433307 D PFAM: Polysaccharide deacetylase; putative xylanase/chitin deacetylase 2432453..2433307 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791745 YP_005200281.1 CDS Rahaq2_2286 NC_016818.1 2433300 2434202 D PFAM: Polysaccharide deacetylase; putative xylanase/chitin deacetylase 2433300..2434202 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791746 YP_005200282.1 CDS Rahaq2_2287 NC_016818.1 2434195 2435556 D PFAM: MmgE/PrpD family; propionate catabolism protein 2434195..2435556 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791747 YP_005200283.1 CDS Rahaq2_2288 NC_016818.1 2435659 2436705 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; putative dehydrogenase 2435659..2436705 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791748 YP_005200284.1 CDS Rahaq2_2289 NC_016818.1 2436785 2437804 D putative Na+-dependent transporter 2436785..2437804 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791749 YP_005200285.1 CDS Rahaq2_2290 NC_016818.1 2437867 2438865 R PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; adenosine deaminase complement(2437867..2438865) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791750 YP_005200286.1 CDS Rahaq2_2291 NC_016818.1 2439073 2440248 R PFAM: Aminotransferase class I and II; bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities complement(2439073..2440248) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791751 YP_005200287.1 CDS Rahaq2_2292 NC_016818.1 2440307 2441920 R PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, maltose and glucose-specific IIBC component; PTS system, maltose and glucose-specific subfamily, IIC component; PTS system, maltose and glucose-specific subfamily, IIC component complement(2440307..2441920) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791752 YP_005200288.1 CDS Rahaq2_2293 NC_016818.1 2442175 2443206 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 2442175..2443206 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794028 YP_005200289.1 CDS Rahaq2_2294 NC_016818.1 2443257 2443550 R PFAM: Protein of unknown function (DUF1161); hypothetical protein complement(2443257..2443550) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791753 YP_005200290.1 CDS Rahaq2_2295 NC_016818.1 2443603 2443971 R PFAM: Protein of unknown function (DUF1283); hypothetical protein complement(2443603..2443971) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791754 YP_005200291.1 CDS Rahaq2_2296 NC_016818.1 2444107 2444433 D PFAM: Uncharacterised BCR, YnfA/UPF0060 family; hypothetical protein 2444107..2444433 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791755 YP_005200292.1 CDS Rahaq2_2297 NC_016818.1 2444440 2445345 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2444440..2445345) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791756 YP_005200293.1 CDS Rahaq2_2298 NC_016818.1 2445657 2446952 D PFAM: Permease family; permease 2445657..2446952 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791757 YP_005200294.1 CDS Rahaq2_2299 NC_016818.1 2446927 2447088 R hypothetical protein complement(2446927..2447088) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791758 YP_005200295.1 CDS Rahaq2_2300 NC_016818.1 2447088 2447837 R PFAM: short chain dehydrogenase; short-chain alcohol dehydrogenase complement(2447088..2447837) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791759 YP_005200296.1 CDS Rahaq2_2301 NC_016818.1 2447965 2449020 R PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein complement(2447965..2449020) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791760 YP_005200297.1 CDS Rahaq2_2302 NC_016818.1 2449046 2450140 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(2449046..2450140) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791761 YP_005200298.1 CDS Rahaq2_2303 NC_016818.1 2450141 2451094 R PFAM: pfkB family carbohydrate kinase; sugar kinase complement(2450141..2451094) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791762 YP_005200299.1 CDS Rahaq2_2304 NC_016818.1 2451121 2451960 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(2451121..2451960) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791763 YP_005200300.1 CDS Rahaq2_2305 NC_016818.1 2451957 2452859 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(2451957..2452859) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794029 YP_005200301.1 CDS Rahaq2_2306 NC_016818.1 2452922 2454172 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(2452922..2454172) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791764 YP_005200302.1 CDS Rahaq2_2308 NC_016818.1 2454591 2455766 D PFAM: ROK family; transcriptional regulator/sugar kinase 2454591..2455766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794031 YP_005200303.1 CDS Rahaq2_2309 NC_016818.1 2455735 2456319 R PFAM: Yersinia/Haemophilus virulence surface antigen; virulence surface antigen complement(2455735..2456319) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791765 YP_005200304.1 CDS Rahaq2_2310 NC_016818.1 2456549 2457901 D PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase; guanine deaminase 2456549..2457901 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791766 YP_005200305.1 CDS Rahaq2_2311 NC_016818.1 2457898 2458569 D PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region; transcriptional regulator 2457898..2458569 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791767 YP_005200306.1 CDS Rahaq2_2312 NC_016818.1 2458581 2459984 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: xanthine dehydrogenase, small subunit; xanthine dehydrogenase small subunit 2458581..2459984 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791768 YP_005200307.1 CDS Rahaq2_2313 NC_016818.1 2459977 2462376 D PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; manually curated; xanthine dehydrogenase molybdopterin binding subunit 2459977..2462376 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791769 YP_005200308.1 CDS Rahaq2_2314 NC_016818.1 2462387 2463178 D PFAM: XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; xanthine dehydrogenase accessory protein XdhC 2462387..2463178 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791770 YP_005200309.1 CDS Rahaq2_2315 NC_016818.1 2463280 2464347 D PFAM: ABC transporter; spermidine/putrescine ABC transporter ATPase 2463280..2464347 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791771 YP_005200310.1 CDS Rahaq2_2316 NC_016818.1 2464372 2465370 D PFAM: Bacterial extracellular solute-binding protein; Fe3+ ABC transporter periplasmic protein 2464372..2465370 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791772 YP_005200311.1 CDS Rahaq2_2317 NC_016818.1 2465390 2467120 D PFAM: Binding-protein-dependent transport system inner membrane component; Fe3+ ABC transporter permease 2465390..2467120 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791773 YP_005200312.1 CDS Rahaq2_2318 NC_016818.1 2467162 2467770 R hypothetical protein complement(2467162..2467770) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791774 YP_005200313.1 CDS Rahaq2_2319 NC_016818.1 2468035 2468730 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 2468035..2468730 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791775 YP_005200314.1 CDS Rahaq2_2320 NC_016818.1 2468782 2469555 R PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein; hypothetical protein complement(2468782..2469555) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791776 YP_005200315.1 CDS Rahaq2_2321 NC_016818.1 2469542 2470213 R PFAM: ABC transporter; ABC transporter ATPase complement(2469542..2470213) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791777 YP_005200316.1 CDS Rahaq2_2322 NC_016818.1 2470279 2471820 R PFAM: Bacterial protein of unknown function (DUF945); hypothetical protein complement(2470279..2471820) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791778 YP_005200317.1 CDS Rahaq2_2323 NC_016818.1 2471955 2473136 R PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; mannose-6-phosphate isomerase complement(2471955..2473136) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791779 YP_005200318.1 CDS Rahaq2_2324 NC_016818.1 2473383 2474780 D PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II; class II fumarate hydratase 2473383..2474780 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791780 YP_005200319.1 CDS Rahaq2_2325 NC_016818.1 2474841 2475776 R PFAM: DNA replication terminus site-binding protein (Ter protein); TIGRFAM: DNA replication terminus site-binding protein; DNA replication terminus site-binding protein complement(2474841..2475776) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791781 YP_005200320.1 CDS Rahaq2_2326 NC_016818.1 2475942 2476490 R hypothetical protein complement(2475942..2476490) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791782 YP_005200321.1 CDS Rahaq2_2327 NC_016818.1 2476601 2477167 D PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; 3-methyladenine DNA glycosylase 2476601..2477167 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794032 YP_005200322.1 CDS Rahaq2_2328 NC_016818.1 2477214 2478665 R PFAM: Fic/DOC family; ASCH domain; hypothetical protein complement(2477214..2478665) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791783 YP_005200323.1 CDS Rahaq2_2329 NC_016818.1 2478758 2479297 R hypothetical protein complement(2478758..2479297) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791784 YP_005200324.1 CDS Rahaq2_2330 NC_016818.1 2479578 2480183 R PFAM: Transglycosylase SLT domain; lytic murein transglycosylase complement(2479578..2480183) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794033 YP_005200325.1 CDS Rahaq2_2331 NC_016818.1 2480403 2481392 D PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family; transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 2480403..2481392 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791785 YP_005200326.1 CDS Rahaq2_2332 NC_016818.1 2481471 2482481 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I 2481471..2482481 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791786 YP_005200327.1 CDS Rahaq2_2333 NC_016818.1 2482619 2483032 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; putative lactoylglutathione lyase complement(2482619..2483032) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791787 YP_005200328.1 CDS Rahaq2_2334 NC_016818.1 2483208 2483666 D transcriptional regulator 2483208..2483666 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791788 YP_005200329.1 CDS Rahaq2_2335 NC_016818.1 2483821 2484702 R PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; beta-hydroxyacid dehydrogenase complement(2483821..2484702) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791789 YP_005200330.1 CDS Rahaq2_2336 NC_016818.1 2484923 2485294 D hypothetical protein 2484923..2485294 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791790 YP_005200331.1 CDS Rahaq2_2337 NC_016818.1 2485424 2485690 D PFAM: Competence regulator Spx (YjbD); Competence regulator Spx (YjbD) 2485424..2485690 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791791 YP_005200332.1 CDS Rahaq2_2338 NC_016818.1 2485735 2487354 R PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase complement(2485735..2487354) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791792 YP_005200333.1 CDS Rahaq2_2339 NC_016818.1 2487347 2487949 R PFAM: Cysteine dioxygenase type I; putative metal-dependent enzyme of the double-stranded beta helix superfamily complement(2487347..2487949) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791793 YP_005200334.1 CDS Rahaq2_2340 NC_016818.1 2488138 2489055 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2488138..2489055 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794034 YP_005200335.1 CDS Rahaq2_2341 NC_016818.1 2489138 2489536 D PFAM: Bacterial OB fold (BOF) protein; TIGRFAM: TIGR00156 family protein; hypothetical protein 2489138..2489536 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791794 YP_005200336.1 CDS Rahaq2_2342 NC_016818.1 2489721 2490818 D PFAM: Luciferase-like monooxygenase; F420-dependent methylene-tetrahydromethanopterin reductase 2489721..2490818 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791795 YP_005200337.1 CDS Rahaq2_2343 NC_016818.1 2490828 2491766 D PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family; ABC transporter, substrate-binding protein, aliphatic sulfonates family 2490828..2491766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791796 YP_005200338.1 CDS Rahaq2_2344 NC_016818.1 2491911 2492609 D PFAM: DJ-1/PfpI family; transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 2491911..2492609 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791797 YP_005200339.1 CDS Rahaq2_2345 NC_016818.1 2492741 2492968 D hypothetical protein 2492741..2492968 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791798 YP_005200340.1 CDS Rahaq2_2346 NC_016818.1 2493104 2493967 D PFAM: Pirin C-terminal cupin domain; Pirin; Pirin-like protein 2493104..2493967 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791799 YP_005200341.1 CDS Rahaq2_2347 NC_016818.1 2494024 2495286 R PFAM: Major Facilitator Superfamily; nitrate/nitrite transporter complement(2494024..2495286) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791800 YP_005200342.1 CDS Rahaq2_2348 NC_016818.1 2495541 2496710 R PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase complement(2495541..2496710) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791801 YP_005200343.1 CDS Rahaq2_2349 NC_016818.1 2497169 2499475 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; molybdopterin-dependent oxidoreductase alpha subunit 2497169..2499475 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791802 YP_005200344.1 CDS Rahaq2_2350 NC_016818.1 2499624 2501567 D PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonucleases; exoribonuclease II 2499624..2501567 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791803 YP_005200345.1 CDS Rahaq2_2351 NC_016818.1 2502285 2503238 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(2502285..2503238) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794035 YP_005200346.1 CDS Rahaq2_2352 NC_016818.1 2503431 2504375 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; lactate dehydrogenase-like oxidoreductase complement(2503431..2504375) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791804 YP_005200347.1 CDS Rahaq2_2353 NC_016818.1 2504588 2506870 D PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; glycogen debranching protein GlgX 2504588..2506870 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791805 YP_005200348.1 CDS Rahaq2_2354 NC_016818.1 2506917 2507957 R PFAM: ApbE family; membrane-associated lipoprotein involved in thiamine biosynthesis complement(2506917..2507957) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794036 YP_005200349.1 CDS Rahaq2_2355 NC_016818.1 2508070 2508636 R PFAM: Smr domain; hypothetical protein complement(2508070..2508636) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791806 YP_005200350.1 CDS Rahaq2_2356 NC_016818.1 2508851 2509666 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase-related protein; mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase, subfamily IIB/mannosyl-3-phosphoglycerate phosphatase family 2508851..2509666 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791807 YP_005200351.1 CDS Rahaq2_2357 NC_016818.1 2509785 2511005 D hypothetical protein 2509785..2511005 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791808 YP_005200352.1 CDS Rahaq2_2358 NC_016818.1 2511085 2512110 R PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family; TerC family integral membrane protein complement(2511085..2512110) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791809 YP_005200353.1 CDS Rahaq2_2359 NC_016818.1 2512549 2513304 D PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; cAMP-binding protein 2512549..2513304 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791810 YP_005200354.1 CDS Rahaq2_2360 NC_016818.1 2513440 2514399 D PFAM: Universal stress protein family; universal stress protein UspA-like protein 2513440..2514399 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791811 YP_005200355.1 CDS Rahaq2_2361 NC_016818.1 2514528 2514986 R PFAM: Transposase IS200 like; transposase complement(2514528..2514986) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791812 YP_005200356.1 CDS Rahaq2_2363 NC_016818.1 2515176 2516567 R PFAM: NAD(P) transhydrogenase beta subunit; NAD/NADP transhydrogenase subunit beta complement(2515176..2516567) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794037 YP_005200357.1 CDS Rahaq2_2364 NC_016818.1 2516577 2518106 R PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; NAD(P) transhydrogenase subunit alpha complement(2516577..2518106) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791814 YP_005200358.1 CDS Rahaq2_2365 NC_016818.1 2518644 2519597 D PFAM: Protein of unknown function (DUF1471); hypothetical protein 2518644..2519597 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791815 YP_005200359.1 CDS Rahaq2_2366 NC_016818.1 2519671 2520783 R PFAM: Membrane dipeptidase (Peptidase family M19); Zn-dependent dipeptidase, microsomal dipeptidase complement(2519671..2520783) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794038 YP_005200360.1 CDS Rahaq2_2367 NC_016818.1 2521034 2522629 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 2521034..2522629 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791816 YP_005200361.1 CDS Rahaq2_2368 NC_016818.1 2522626 2523639 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2522626..2523639 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791817 YP_005200362.1 CDS Rahaq2_2369 NC_016818.1 2523636 2524562 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2523636..2524562 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791818 YP_005200363.1 CDS Rahaq2_2370 NC_016818.1 2524562 2525392 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; dipeptide/oligopeptide/nickel ABC transporter ATPase 2524562..2525392 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791819 YP_005200364.1 CDS Rahaq2_2371 NC_016818.1 2525389 2526162 D PFAM: ABC transporter; dipeptide/oligopeptide/nickel ABC transporter ATPase 2525389..2526162 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791820 YP_005200365.1 CDS Rahaq2_2372 NC_016818.1 2526246 2527805 D PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C 2526246..2527805 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791821 YP_005200366.1 CDS Rahaq2_2373 NC_016818.1 2527978 2529645 D PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; high affinity sulfate transporter 1 2527978..2529645 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791822 YP_005200367.1 CDS Rahaq2_2374 NC_016818.1 2529709 2530563 R PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 3-deoxy-7-phosphoheptulonate synthase complement(2529709..2530563) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791823 YP_005200368.1 CDS Rahaq2_2375 NC_016818.1 2530659 2531468 R hypothetical protein complement(2530659..2531468) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791824 YP_005200369.1 CDS Rahaq2_2376 NC_016818.1 2531471 2531860 R PFAM: Invasion gene expression up-regulator, SirB; hypothetical protein complement(2531471..2531860) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791825 YP_005200370.1 CDS Rahaq2_2377 NC_016818.1 2531907 2532749 R PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-N5) methyltransferase complement(2531907..2532749) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791826 YP_005200371.1 CDS Rahaq2_2378 NC_016818.1 2532749 2533831 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 complement(2532749..2533831) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791827 YP_005200372.1 CDS Rahaq2_2379 NC_016818.1 2533864 2535126 R PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(2533864..2535126) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791828 YP_005200373.1 CDS Rahaq2_2380 NC_016818.1 2535390 2536013 D PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 2535390..2536013 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791829 YP_005200374.1 CDS Rahaq2_2381 NC_016818.1 2536015 2536878 D PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2536015..2536878 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791830 YP_005200375.1 CDS Rahaq2_2382 NC_016818.1 2537041 2537988 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 2537041..2537988 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794039 YP_005200376.1 CDS Rahaq2_2383 NC_016818.1 2538111 2538389 R PFAM: Protein of unknown function (DUF2583); hypothetical protein complement(2538111..2538389) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791831 YP_005200377.1 CDS Rahaq2_2384 NC_016818.1 2538698 2539273 D PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 2538698..2539273 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791832 YP_005200378.1 CDS Rahaq2_2385 NC_016818.1 2539329 2541242 R PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal-translocating P-type ATPase complement(2539329..2541242) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791833 YP_005200379.1 CDS Rahaq2_2386 NC_016818.1 2541255 2542298 R PFAM: SPFH domain / Band 7 family; membrane protease subunit, stomatin/prohibitin complement(2541255..2542298) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791834 YP_005200380.1 CDS Rahaq2_2387 NC_016818.1 2542295 2543335 R PFAM: SPFH domain / Band 7 family; membrane protease subunit, stomatin/prohibitin complement(2542295..2543335) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791835 YP_005200381.1 CDS Rahaq2_2388 NC_016818.1 2543332 2545389 R PFAM: SPFH domain / Band 7 family; membrane protease subunit, stomatin/prohibitin complement(2543332..2545389) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791836 YP_005200382.1 CDS Rahaq2_2389 NC_016818.1 2545591 2546049 R PFAM: Transposase IS200 like; transposase complement(2545591..2546049) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791837 YP_005200383.1 CDS Rahaq2_2391 NC_016818.1 2546233 2547714 R PFAM: Sulfate transporter family; STAS domain; sulfate permease complement(2546233..2547714) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791839 YP_005200384.1 CDS Rahaq2_2392 NC_016818.1 2547933 2549024 D PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein YchF 2547933..2549024 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791840 YP_005200385.1 CDS Rahaq2_2393 NC_016818.1 2549424 2549948 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 2549424..2549948 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794040 YP_005200386.1 CDS Rahaq2_2394 NC_016818.1 2550027 2550551 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 2550027..2550551 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791841 YP_005200387.1 CDS Rahaq2_2395 NC_016818.1 2550644 2551372 D PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD 2550644..2551372 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791842 YP_005200388.1 CDS Rahaq2_2396 NC_016818.1 2551529 2554078 D PFAM: Fimbrial Usher protein; P pilus assembly protein, porin PapC 2551529..2554078 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791843 YP_005200389.1 CDS Rahaq2_2397 NC_016818.1 2554091 2555068 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 2554091..2555068 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791844 YP_005200390.1 CDS Rahaq2_2398 NC_016818.1 2555125 2555763 R cAMP-binding protein complement(2555125..2555763) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791845 YP_005200391.1 CDS Rahaq2_2399 NC_016818.1 2556138 2556485 D PFAM: HNH endonuclease; HNH endonuclease 2556138..2556485 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791846 YP_005200392.1 CDS Rahaq2_2400 NC_016818.1 2556692 2558899 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2556692..2558899 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794041 YP_005200393.1 CDS Rahaq2_2401 NC_016818.1 2558971 2560152 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(2558971..2560152) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791847 YP_005200394.1 CDS Rahaq2_2402 NC_016818.1 2560149 2560847 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(2560149..2560847) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791848 YP_005200395.1 CDS Rahaq2_2403 NC_016818.1 2560988 2569558 R PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family; cellobiose phosphorylase complement(2560988..2569558) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794042 YP_005200396.1 CDS Rahaq2_2404 NC_016818.1 2569904 2570542 D PFAM: Nitroreductase family; nitroreductase 2569904..2570542 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791849 YP_005200397.1 CDS Rahaq2_2405 NC_016818.1 2570766 2572298 D PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2570766..2572298 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791850 YP_005200398.1 CDS Rahaq2_2406 NC_016818.1 2572416 2573267 D PFAM: SIS domain; Helix-turn-helix domain, rpiR family; transcriptional regulator 2572416..2573267 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791851 YP_005200399.1 CDS Rahaq2_2407 NC_016818.1 2573518 2574354 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 2573518..2574354 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791852 YP_005200400.1 CDS Rahaq2_2408 NC_016818.1 2574358 2574987 D PFAM: Domain of unknown function (DUF1989); hypothetical protein 2574358..2574987 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791853 YP_005200401.1 CDS Rahaq2_2409 NC_016818.1 2574971 2575618 D PFAM: Domain of unknown function (DUF1989); hypothetical protein 2574971..2575618 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791854 YP_005200402.1 CDS Rahaq2_2410 NC_016818.1 2575622 2576275 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 2575622..2576275 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791855 YP_005200403.1 CDS Rahaq2_2411 NC_016818.1 2576275 2576940 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 2576275..2576940 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791856 YP_005200404.1 CDS Rahaq2_2412 NC_016818.1 2576954 2577631 D PFAM: Domain of unknown function (DUF1989); hypothetical protein 2576954..2577631 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791857 YP_005200405.1 CDS Rahaq2_2413 NC_016818.1 2577764 2578408 R PFAM: NADP oxidoreductase coenzyme F420-dependent; putative dinucleotide-binding enzyme complement(2577764..2578408) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794043 YP_005200406.1 CDS Rahaq2_2414 NC_016818.1 2578514 2579401 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2578514..2579401 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791858 YP_005200407.1 CDS Rahaq2_2415 NC_016818.1 2579478 2582255 R PFAM: FAD binding domain; NADH:flavin oxidoreductase / NADH oxidase family; FMN-binding domain; TIGRFAM: flavocytochrome c; flavocytochrome c complement(2579478..2582255) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791859 YP_005200408.1 CDS Rahaq2_2416 NC_016818.1 2582863 2584374 D PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; anion transporter 2582863..2584374 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791860 YP_005200409.1 CDS Rahaq2_2417 NC_016818.1 2584460 2585125 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(2584460..2585125) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791861 YP_005200410.1 CDS Rahaq2_2418 NC_016818.1 2585313 2586806 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 2585313..2586806 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791862 YP_005200411.1 CDS Rahaq2_2419 NC_016818.1 2586803 2587648 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2586803..2587648 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791863 YP_005200412.1 CDS Rahaq2_2420 NC_016818.1 2587650 2588564 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 2587650..2588564 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791864 YP_005200413.1 CDS Rahaq2_2421 NC_016818.1 2588561 2589943 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase 2588561..2589943 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791865 YP_005200414.1 CDS Rahaq2_2422 NC_016818.1 2590004 2591005 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; D-cysteine desulfhydrase family pyridoxal phosphate-dependent protein 2590004..2591005 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794044 YP_005200415.1 CDS Rahaq2_2423 NC_016818.1 2591007 2592005 D PFAM: Ornithine cyclodeaminase/mu-crystallin family; putative ornithine cyclodeaminase, mu-crystallin 2591007..2592005 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791866 YP_005200416.1 CDS Rahaq2_2424 NC_016818.1 2591998 2592852 D PFAM: Rhodanese-like domain; rhodanese-related sulfurtransferase 2591998..2592852 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791867 YP_005200417.1 CDS Rahaq2_2425 NC_016818.1 2592849 2594477 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain complement(2592849..2594477) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791868 YP_005200418.1 CDS Rahaq2_2426 NC_016818.1 2594696 2595631 R PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(2594696..2595631) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791869 YP_005200419.1 CDS Rahaq2_2427 NC_016818.1 2595808 2596812 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(2595808..2596812) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791870 YP_005200420.1 CDS Rahaq2_2428 NC_016818.1 2596831 2598417 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(2596831..2598417) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791871 YP_005200421.1 CDS Rahaq2_2429 NC_016818.1 2598666 2599652 R PFAM: family; sugar ABC transporter periplasmic protein complement(2598666..2599652) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791872 YP_005200422.1 CDS Rahaq2_2430 NC_016818.1 2600070 2601749 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; L-ribulokinase 2600070..2601749 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791873 YP_005200423.1 CDS Rahaq2_2431 NC_016818.1 2601786 2603291 D PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain; L-arabinose isomerase 2601786..2603291 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791874 YP_005200424.1 CDS Rahaq2_2432 NC_016818.1 2603386 2604324 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(2603386..2604324) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791875 YP_005200425.1 CDS Rahaq2_2433 NC_016818.1 2604779 2605528 D PFAM: ABC transporter; spermidine/putrescine ABC transporter ATPase 2604779..2605528 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791876 YP_005200426.1 CDS Rahaq2_2434 NC_016818.1 2605546 2606547 D PFAM: Bacterial extracellular solute-binding protein; Fe3+ ABC transporter periplasmic protein 2605546..2606547 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791877 YP_005200427.1 CDS Rahaq2_2435 NC_016818.1 2606596 2608254 D PFAM: Binding-protein-dependent transport system inner membrane component; Fe3+ ABC transporter permease 2606596..2608254 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791878 YP_005200428.1 CDS Rahaq2_2436 NC_016818.1 2608251 2609744 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; arabinose efflux permease family protein complement(2608251..2609744) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791879 YP_005200429.1 CDS Rahaq2_2437 NC_016818.1 2609914 2610417 R hypothetical protein complement(2609914..2610417) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791880 YP_005200430.1 CDS Rahaq2_2438 NC_016818.1 2610457 2611143 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase complement(2610457..2611143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791881 YP_005200431.1 CDS Rahaq2_2439 NC_016818.1 2611376 2612599 R PFAM: ROK family; transcriptional regulator/sugar kinase complement(2611376..2612599) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791882 YP_005200432.1 CDS Rahaq2_2440 NC_016818.1 2612767 2613666 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2612767..2613666) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791883 YP_005200433.1 CDS Rahaq2_2441 NC_016818.1 2613809 2615101 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 2613809..2615101 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794045 YP_005200434.1 CDS Rahaq2_2442 NC_016818.1 2615147 2616241 R PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATPase complement(2615147..2616241) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791884 YP_005200435.1 CDS Rahaq2_2443 NC_016818.1 2616246 2617088 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(2616246..2617088) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791885 YP_005200436.1 CDS Rahaq2_2444 NC_016818.1 2617099 2618022 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(2617099..2618022) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791886 YP_005200437.1 CDS Rahaq2_2445 NC_016818.1 2618086 2619366 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(2618086..2619366) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791887 YP_005200438.1 CDS Rahaq2_2446 NC_016818.1 2619427 2620605 R PFAM: Cys/Met metabolism PLP-dependent enzyme; cystathionine beta-lyase/cystathionine gamma-synthase complement(2619427..2620605) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791888 YP_005200439.1 CDS Rahaq2_2447 NC_016818.1 2620592 2621305 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(2620592..2621305) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791889 YP_005200440.1 CDS Rahaq2_2448 NC_016818.1 2621613 2622818 D PFAM: FAD binding domain; 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase 2621613..2622818 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794046 YP_005200441.1 CDS Rahaq2_2449 NC_016818.1 2623600 2624967 D PFAM: C4-dicarboxylate anaerobic carrier; TIGRFAM: c4-dicarboxylate anaerobic carrier family protein; c4-dicarboxylate anaerobic carrier family protein 2623600..2624967 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791890 YP_005200442.1 CDS Rahaq2_2450 NC_016818.1 2625127 2625567 D PFAM: Protein of unknown function (DUF2569); hypothetical protein 2625127..2625567 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791891 YP_005200443.1 CDS Rahaq2_2451 NC_016818.1 2625608 2626189 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 2625608..2626189 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791892 YP_005200444.1 CDS Rahaq2_2452 NC_016818.1 2626189 2626755 D PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; RnfABCDGE type electron transport complex subunit B 2626189..2626755 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791893 YP_005200445.1 CDS Rahaq2_2453 NC_016818.1 2626757 2628718 D PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 2626757..2628718 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791894 YP_005200446.1 CDS Rahaq2_2454 NC_016818.1 2628719 2629771 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D 2628719..2629771 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791895 YP_005200447.1 CDS Rahaq2_2455 NC_016818.1 2629781 2630413 D PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 2629781..2630413 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791896 YP_005200448.1 CDS Rahaq2_2456 NC_016818.1 2630406 2631104 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; RnfABCDGE type electron transport complex subunit E 2630406..2631104 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791897 YP_005200449.1 CDS Rahaq2_2457 NC_016818.1 2631097 2631735 D PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; endonuclease III 2631097..2631735 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791898 YP_005200450.1 CDS Rahaq2_2458 NC_016818.1 2631990 2632487 R PFAM: Protein of unknown function (DUF2501); hypothetical protein complement(2631990..2632487) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794047 YP_005200451.1 CDS Rahaq2_2459 NC_016818.1 2632586 2633506 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2632586..2633506) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791899 YP_005200452.1 CDS Rahaq2_2460 NC_016818.1 2633555 2634535 R PFAM: alpha/beta hydrolase fold; esterase/lipase complement(2633555..2634535) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791900 YP_005200453.1 CDS Rahaq2_2461 NC_016818.1 2634641 2635636 R PFAM: High-affinity nickel-transport protein; ABC transporter permease complement(2634641..2635636) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794048 YP_005200454.1 CDS Rahaq2_2462 NC_016818.1 2635649 2635921 D PFAM: Uncharacterised BCR, COG1937; hypothetical protein 2635649..2635921 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791901 YP_005200455.1 CDS Rahaq2_2463 NC_016818.1 2635995 2637413 R PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrite extrusion protein, nitrite facilitator complement(2635995..2637413) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791902 YP_005200456.1 CDS Rahaq2_2464 NC_016818.1 2637775 2639565 D PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase, nitrate/nitrite-specific 2637775..2639565 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791903 YP_005200457.1 CDS Rahaq2_2465 NC_016818.1 2639562 2640212 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 2639562..2640212 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794049 YP_005200458.1 CDS Rahaq2_2466 NC_016818.1 2640272 2641714 R PFAM: Protein of unknown function (DUF3442); hypothetical protein complement(2640272..2641714) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791904 YP_005200459.1 CDS Rahaq2_2467 NC_016818.1 2642128 2642877 D hypothetical protein 2642128..2642877 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791905 YP_005200460.1 CDS Rahaq2_2468 NC_016818.1 2642893 2644656 D PFAM: GMC oxidoreductase; choline dehydrogenase-like flavoprotein 2642893..2644656 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794050 YP_005200461.1 CDS Rahaq2_2469 NC_016818.1 2644653 2645888 D PFAM: Cytochrome c; cytochrome c, mono- and diheme variants family 2644653..2645888 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791906 YP_005200462.1 CDS Rahaq2_2470 NC_016818.1 2645955 2646374 R hypothetical protein complement(2645955..2646374) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791907 YP_005200463.1 CDS Rahaq2_2471 NC_016818.1 2646592 2647323 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 2646592..2647323 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791908 YP_005200464.1 CDS Rahaq2_2472 NC_016818.1 2647320 2648663 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 2647320..2648663 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791909 YP_005200465.1 CDS Rahaq2_2473 NC_016818.1 2648647 2650128 D PFAM: Carboxypeptidase Taq (M32) metallopeptidase; Zn-dependent carboxypeptidase 2648647..2650128 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791910 YP_005200466.1 CDS Rahaq2_2474 NC_016818.1 2650642 2651556 D PFAM: Dihydrodipicolinate synthetase family; dihydrodipicolinate synthase/N-acetylneuraminate lyase 2650642..2651556 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791911 YP_005200467.1 CDS Rahaq2_2475 NC_016818.1 2651702 2652466 D PFAM: Ferric iron reductase FhuF-like transporter; FhuF 2Fe-2S C-terminal domain; TIGRFAM: siderophore-iron reductase FhuF; siderophore-iron reductase FhuF 2651702..2652466 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791912 YP_005200468.1 CDS Rahaq2_2476 NC_016818.1 2652572 2652910 D hypothetical protein 2652572..2652910 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791913 YP_005200469.1 CDS Rahaq2_2477 NC_016818.1 2653102 2654421 D PFAM: Sugar (and other) transporter; sugar phosphate permease 2653102..2654421 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791914 YP_005200470.1 CDS Rahaq2_2478 NC_016818.1 2654425 2655279 D PFAM: Helix-turn-helix domain, rpiR family; SIS domain; transcriptional regulator 2654425..2655279 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791915 YP_005200471.1 CDS Rahaq2_2479 NC_016818.1 2655344 2656432 D PFAM: Iron-containing alcohol dehydrogenase; glycerol dehydrogenase 2655344..2656432 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791916 YP_005200472.1 CDS Rahaq2_2480 NC_016818.1 2657041 2658156 R PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro aminopeptidase complement(2657041..2658156) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791917 YP_005200473.1 CDS Rahaq2_2481 NC_016818.1 2658174 2659397 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase complement(2658174..2659397) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794051 YP_005200474.1 CDS Rahaq2_2482 NC_016818.1 2659415 2661049 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain complement(2659415..2661049) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791918 YP_005200475.1 CDS Rahaq2_2483 NC_016818.1 2661049 2661876 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2661049..2661876) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791919 YP_005200476.1 CDS Rahaq2_2484 NC_016818.1 2661869 2662816 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2661869..2662816) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794052 YP_005200477.1 CDS Rahaq2_2485 NC_016818.1 2662832 2664427 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(2662832..2664427) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791920 YP_005200478.1 CDS Rahaq2_2486 NC_016818.1 2664430 2665746 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase complement(2664430..2665746) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791921 YP_005200479.1 CDS Rahaq2_2487 NC_016818.1 2665824 2666597 D PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator 2665824..2666597 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791922 YP_005200480.1 CDS Rahaq2_2488 NC_016818.1 2667051 2667941 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2667051..2667941) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791923 YP_005200481.1 CDS Rahaq2_2489 NC_016818.1 2667949 2668770 R PFAM: D-aminopeptidase; D-aminopeptidase complement(2667949..2668770) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791924 YP_005200482.1 CDS Rahaq2_2490 NC_016818.1 2668855 2669919 R PFAM: Peptidase family S58; L-aminopeptidase/D-esterase complement(2668855..2669919) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791925 YP_005200483.1 CDS Rahaq2_2491 NC_016818.1 2669964 2670875 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2669964..2670875) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791926 YP_005200484.1 CDS Rahaq2_2492 NC_016818.1 2670885 2671805 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2670885..2671805) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791927 YP_005200485.1 CDS Rahaq2_2493 NC_016818.1 2672043 2673587 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(2672043..2673587) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791928 YP_005200486.1 CDS Rahaq2_2494 NC_016818.1 2673624 2675492 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; ATPase component of various ABC-type transport systems with duplicated ATPase domain complement(2673624..2675492) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791929 YP_005200487.1 CDS Rahaq2_2495 NC_016818.1 2675527 2676492 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; L-alanine-DL-glutamate epimerase-like protein complement(2675527..2676492) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791930 YP_005200488.1 CDS Rahaq2_2496 NC_016818.1 2676492 2677502 R PFAM: Protein of unknown function (DUF1611); hypothetical protein complement(2676492..2677502) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791931 YP_005200489.1 CDS Rahaq2_2497 NC_016818.1 2677775 2678884 R PFAM: Gram-negative porin; outer membrane protein (porin) complement(2677775..2678884) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791932 YP_005200490.1 CDS Rahaq2_2498 NC_016818.1 2679661 2681373 R PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase/permease complement(2679661..2681373) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791933 YP_005200491.1 CDS Rahaq2_2499 NC_016818.1 2681479 2681784 R hypothetical protein complement(2681479..2681784) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791934 YP_005200492.1 CDS Rahaq2_2500 NC_016818.1 2681799 2682323 R hypothetical protein complement(2681799..2682323) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791935 YP_005200493.1 CDS Rahaq2_2501 NC_016818.1 2682594 2683502 R PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase complement(2682594..2683502) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791936 YP_005200494.1 CDS Rahaq2_2502 NC_016818.1 2683671 2683910 R TIGRFAM: LPXTG-motif cell wall anchor domain; hypothetical protein complement(2683671..2683910) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791937 YP_005200495.1 CDS Rahaq2_2503 NC_016818.1 2684008 2684688 R PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma complement(2684008..2684688) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791938 YP_005200496.1 CDS Rahaq2_2504 NC_016818.1 2684685 2685407 R PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; nitrate reductase molybdenum cofactor assembly chaperone complement(2684685..2685407) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791939 YP_005200497.1 CDS Rahaq2_2505 NC_016818.1 2685407 2686942 R TIGRFAM: nitrate reductase, beta subunit; nitrate reductase subunit beta complement(2685407..2686942) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791940 YP_005200498.1 CDS Rahaq2_2506 NC_016818.1 2686939 2690703 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; respiratory nitrate reductase subunit alpha complement(2686939..2690703) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791941 YP_005200499.1 CDS Rahaq2_2507 NC_016818.1 2691089 2692108 D PFAM: CorA-like Mg2+ transporter protein; Mg2+/Co2+ transporter 2691089..2692108 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791942 YP_005200500.1 CDS Rahaq2_2508 NC_016818.1 2692131 2693834 R PFAM: Voltage gated chloride channel; chloride channel protein EriC complement(2692131..2693834) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791943 YP_005200501.1 CDS Rahaq2_2509 NC_016818.1 2694057 2695631 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(2694057..2695631) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791944 YP_005200502.1 CDS Rahaq2_2510 NC_016818.1 2695881 2696558 R PFAM: ABC transporter; dipeptide/oligopeptide/nickel ABC transporter ATPase complement(2695881..2696558) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794053 YP_005200503.1 CDS Rahaq2_2511 NC_016818.1 2696551 2697420 R PFAM: ABC transporter; dipeptide/oligopeptide/nickel ABC transporter ATPase complement(2696551..2697420) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791945 YP_005200504.1 CDS Rahaq2_2512 NC_016818.1 2697410 2698288 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2697410..2698288) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791946 YP_005200505.1 CDS Rahaq2_2513 NC_016818.1 2698294 2699346 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(2698294..2699346) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791947 YP_005200506.1 CDS Rahaq2_2514 NC_016818.1 2699346 2700914 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(2699346..2700914) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791948 YP_005200507.1 CDS Rahaq2_2515 NC_016818.1 2701202 2701891 R PFAM: ChaC-like protein; cation transport protein complement(2701202..2701891) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791949 YP_005200508.1 CDS Rahaq2_2516 NC_016818.1 2702243 2702476 R PFAM: ChaB; putative cation transport regulator complement(2702243..2702476) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791950 YP_005200509.1 CDS Rahaq2_2517 NC_016818.1 2702942 2704042 D PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger; calcium/proton exchanger (cax); calcium/proton exchanger 2702942..2704042 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791951 YP_005200510.1 CDS Rahaq2_2518 NC_016818.1 2704155 2704943 R PFAM: PhoH-like protein; phosphate starvation-inducible protein PhoH complement(2704155..2704943) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791952 YP_005200511.1 CDS Rahaq2_2519 NC_016818.1 2705004 2705420 R hypothetical protein complement(2705004..2705420) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791953 YP_005200512.1 CDS Rahaq2_2520 NC_016818.1 2705682 2706977 R PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; Tat-translocated enzyme; Tat-translocated enzyme complement(2705682..2706977) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791954 YP_005200513.1 CDS Rahaq2_2521 NC_016818.1 2707033 2708160 R PFAM: Imelysin; putative periplasmic lipoprotein involved in iron transport complement(2707033..2708160) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794054 YP_005200514.1 CDS Rahaq2_2522 NC_016818.1 2708204 2709055 R PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein; high-affinity Fe2+/Pb2+ permease complement(2708204..2709055) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791955 YP_005200515.1 CDS Rahaq2_2523 NC_016818.1 2709306 2710790 R PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family; sodium/proline symporter complement(2709306..2710790) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791956 YP_005200516.1 CDS Rahaq2_2524 NC_016818.1 2711302 2715276 D PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain); delta-1-pyrroline-5-carboxylate dehydrogenase 2711302..2715276 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794055 YP_005200517.1 CDS Rahaq2_2525 NC_016818.1 2715468 2716220 R PFAM: ABC transporter; polar amino acid ABC transporter ATPase complement(2715468..2716220) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791957 YP_005200518.1 CDS Rahaq2_2526 NC_016818.1 2716217 2716885 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease complement(2716217..2716885) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791958 YP_005200519.1 CDS Rahaq2_2527 NC_016818.1 2716956 2717756 R PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system complement(2716956..2717756) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791959 YP_005200520.1 CDS Rahaq2_2528 NC_016818.1 2717892 2718902 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; D-cysteine desulfhydrase family pyridoxal phosphate-dependent protein complement(2717892..2718902) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791960 YP_005200521.1 CDS Rahaq2_2529 NC_016818.1 2719090 2719596 R PFAM: Phage integrase, N-terminal SAM-like domain; TIGRFAM: flagellar regulatory protein FliZ; flagellar regulatory protein FliZ complement(2719090..2719596) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791961 YP_005200522.1 CDS Rahaq2_2530 NC_016818.1 2719651 2720373 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; FliA/WhiG family RNA polymerase sigma factor complement(2719651..2720373) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791962 YP_005200523.1 CDS Rahaq2_2531 NC_016818.1 2720681 2721631 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin/flagellar hook associated protein complement(2720681..2721631) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791963 YP_005200524.1 CDS Rahaq2_2532 NC_016818.1 2721919 2723340 D PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif; flagellar capping protein 2721919..2723340 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791964 YP_005200525.1 CDS Rahaq2_2533 NC_016818.1 2723350 2723787 D PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar biosynthetic protein FliS 2723350..2723787 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794056 YP_005200526.1 CDS Rahaq2_2534 NC_016818.1 2723762 2724124 D PFAM: Flagellar protein FliT; Flagellar protein FliT 2723762..2724124 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791965 YP_005200527.1 CDS Rahaq2_2535 NC_016818.1 2724336 2725190 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 2724336..2725190 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791966 YP_005200528.1 CDS Rahaq2_2536 NC_016818.1 2725309 2725485 D PFAM: Protein of unknown function (DUF2566); hypothetical protein 2725309..2725485 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794057 YP_005200529.1 CDS Rahaq2_2537 NC_016818.1 2725563 2725721 R PFAM: Uncharacterized protein family UPF0057; hypothetical protein complement(2725563..2725721) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791967 YP_005200530.1 CDS Rahaq2_2538 NC_016818.1 2725805 2726059 R hypothetical protein complement(2725805..2726059) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791968 YP_005200531.1 CDS Rahaq2_2539 NC_016818.1 2726101 2726622 D hypothetical protein 2726101..2726622 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791969 YP_005200532.1 CDS Rahaq2_2540 NC_016818.1 2726861 2727136 D hypothetical protein 2726861..2727136 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791970 YP_005200533.1 CDS Rahaq2_2541 NC_016818.1 2727204 2727473 R hypothetical protein complement(2727204..2727473) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791971 YP_005200534.1 CDS Rahaq2_2542 NC_016818.1 2727632 2727832 D hypothetical protein 2727632..2727832 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791972 YP_005200535.1 CDS Rahaq2_2543 NC_016818.1 2727899 2728072 R hypothetical protein complement(2727899..2728072) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791973 YP_005200536.1 CDS Rahaq2_2544 NC_016818.1 2728404 2728868 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase 2728404..2728868 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791974 YP_005200537.1 CDS Rahaq2_2545 NC_016818.1 2728948 2729187 R hypothetical protein complement(2728948..2729187) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791975 YP_005200538.1 CDS Rahaq2_2546 NC_016818.1 2729332 2730237 R PFAM: Bestrophin; hypothetical protein complement(2729332..2730237) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791976 YP_005200539.1 CDS Rahaq2_2547 NC_016818.1 2730254 2730403 D hypothetical protein 2730254..2730403 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791977 YP_005200540.1 CDS Rahaq2_2548 NC_016818.1 2731346 2731660 R PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE complement(2731346..2731660) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791978 YP_005200541.1 CDS Rahaq2_2549 NC_016818.1 2731943 2733652 D PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF 2731943..2733652 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791979 YP_005200542.1 CDS Rahaq2_2550 NC_016818.1 2733649 2734641 D PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 2733649..2734641 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791980 YP_005200543.1 CDS Rahaq2_2551 NC_016818.1 2734634 2735419 D PFAM: Flagellar assembly protein FliH; flagellar biosynthesis/type III secretory pathway protein 2734634..2735419 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791981 YP_005200544.1 CDS Rahaq2_2552 NC_016818.1 2735419 2736783 D PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; flagellar protein export ATPase FliI 2735419..2736783 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791982 YP_005200545.1 CDS Rahaq2_2553 NC_016818.1 2736806 2737252 D PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar export protein FliJ 2736806..2737252 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791983 YP_005200546.1 CDS Rahaq2_2554 NC_016818.1 2737249 2738631 D PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein 2737249..2738631 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791984 YP_005200547.1 CDS Rahaq2_2555 NC_016818.1 2738839 2739339 D PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein 2738839..2739339 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791985 YP_005200548.1 CDS Rahaq2_2556 NC_016818.1 2739347 2740363 D PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliM 2739347..2740363 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791986 YP_005200549.1 CDS Rahaq2_2557 NC_016818.1 2740356 2740772 D PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; flagellar motor switch protein FliN 2740356..2740772 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791987 YP_005200550.1 CDS Rahaq2_2558 NC_016818.1 2740772 2741209 D PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; flagellar biosynthetic protein FliO 2740772..2741209 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791988 YP_005200551.1 CDS Rahaq2_2559 NC_016818.1 2741206 2741988 D PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; flagellar biosynthetic protein FliP 2741206..2741988 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794058 YP_005200552.1 CDS Rahaq2_2560 NC_016818.1 2742155 2742424 D PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 2742155..2742424 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791989 YP_005200553.1 CDS Rahaq2_2561 NC_016818.1 2742428 2743213 D PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 2742428..2743213 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791990 YP_005200554.1 CDS Rahaq2_2562 NC_016818.1 2743219 2744349 R PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; 23S rRNA (uracil-5-)-methyltransferase RumB; 23S rRNA (uracil-5-)-methyltransferase RumB complement(2743219..2744349) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794059 YP_005200555.1 CDS Rahaq2_2563 NC_016818.1 2744434 2744880 R PFAM: Protein of unknown function (DUF2593); hypothetical protein complement(2744434..2744880) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791991 YP_005200556.1 CDS Rahaq2_2564 NC_016818.1 2744946 2745791 R PFAM: Binding-protein-dependent transport system inner membrane component; spermidine/putrescine ABC transporter permease II complement(2744946..2745791) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791992 YP_005200557.1 CDS Rahaq2_2565 NC_016818.1 2745788 2746741 R PFAM: Binding-protein-dependent transport system inner membrane component; spermidine/putrescine ABC transporter permease I complement(2745788..2746741) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791993 YP_005200558.1 CDS Rahaq2_2566 NC_016818.1 2746753 2747886 R PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; spermidine/putrescine ABC transporter ATP-binding subunit complement(2746753..2747886) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791994 YP_005200559.1 CDS Rahaq2_2567 NC_016818.1 2748154 2749263 R PFAM: Bacterial extracellular solute-binding protein; spermidine/putrescine-binding periplasmic protein complement(2748154..2749263) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791995 YP_005200560.1 CDS Rahaq2_2568 NC_016818.1 2749694 2750176 R PFAM: Putative bacterial sensory transduction regulator; sensory transduction regulator complement(2749694..2750176) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791996 YP_005200561.1 CDS Rahaq2_2569 NC_016818.1 2750324 2751226 R PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; alpha-L-glutamate ligase complement(2750324..2751226) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791997 YP_005200562.1 CDS Rahaq2_2570 NC_016818.1 2751245 2751967 R PFAM: Nitroreductase family; nitroreductase complement(2751245..2751967) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791998 YP_005200563.1 CDS Rahaq2_2571 NC_016818.1 2752254 2752520 D PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxA family; Glutaredoxin, GrxA family 2752254..2752520 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791999 YP_005200564.1 CDS Rahaq2_2572 NC_016818.1 2752597 2752968 R PFAM: Putative inner membrane protein of Enterobacteriaceae; Putative inner membrane protein of Enterobacteriaceae complement(2752597..2752968) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794060 YP_005200565.1 CDS Rahaq2_2573 NC_016818.1 2753293 2754975 D PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain; putative permease 2753293..2754975 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792000 YP_005200566.1 CDS Rahaq2_2575 NC_016818.1 2755191 2755556 R hypothetical protein complement(2755191..2755556) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792002 YP_005200567.1 CDS Rahaq2_2576 NC_016818.1 2755654 2755941 R hypothetical protein complement(2755654..2755941) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792003 YP_005200568.1 CDS Rahaq2_2577 NC_016818.1 2755934 2756449 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(2755934..2756449) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792004 YP_005200569.1 CDS Rahaq2_2578 NC_016818.1 2756730 2757335 D PFAM: PAP2 superfamily; membrane-associated phospholipid phosphatase 2756730..2757335 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792005 YP_005200570.1 CDS Rahaq2_2579 NC_016818.1 2757402 2758613 R PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase complement(2757402..2758613) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792006 YP_005200571.1 CDS Rahaq2_2580 NC_016818.1 2758923 2759264 D PFAM: GlpM protein; putative membrane protein required for alginate biosynthesis 2758923..2759264 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792007 YP_005200572.1 CDS Rahaq2_2581 NC_016818.1 2759285 2760208 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(2759285..2760208) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792008 YP_005200573.1 CDS Rahaq2_2582 NC_016818.1 2760365 2761786 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase 2760365..2761786 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792009 YP_005200574.1 CDS Rahaq2_2583 NC_016818.1 2761783 2763066 D PFAM: Sugar (and other) transporter; arabinose efflux permease family protein 2761783..2763066 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794061 YP_005200575.1 CDS Rahaq2_2584 NC_016818.1 2763110 2764264 R PFAM: Glucose / Sorbosone dehydrogenase; glucose/sorbosone dehydrogenase complement(2763110..2764264) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792010 YP_005200576.1 CDS Rahaq2_2585 NC_016818.1 2764565 2765638 D PFAM: family; sugar ABC transporter periplasmic protein 2764565..2765638 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792011 YP_005200577.1 CDS Rahaq2_2586 NC_016818.1 2765840 2767207 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter 2765840..2767207 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794062 YP_005200578.1 CDS Rahaq2_2587 NC_016818.1 2767385 2769709 D PFAM: Glycosyl hydrolases family 31; family 31 glycosyl hydrolase, alpha-glucosidase 2767385..2769709 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792012 YP_005200579.1 CDS Rahaq2_2588 NC_016818.1 2769778 2770965 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; transcriptional regulator complement(2769778..2770965) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792013 YP_005200580.1 CDS Rahaq2_2589 NC_016818.1 2771147 2772346 R PFAM: Branched-chain amino acid transport system / permease component; xylose ABC transporter permease complement(2771147..2772346) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792014 YP_005200581.1 CDS Rahaq2_2590 NC_016818.1 2772339 2773880 R PFAM: ABC transporter; TIGRFAM: D-xylose ABC transporter, ATP-binding protein; D-xylose ABC transporter ATP-binding protein complement(2772339..2773880) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792015 YP_005200582.1 CDS Rahaq2_2591 NC_016818.1 2773945 2774937 R PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein; D-xylose ABC transporter substrate-binding protein complement(2773945..2774937) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792016 YP_005200583.1 CDS Rahaq2_2592 NC_016818.1 2775319 2776638 D PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; xylose isomerase 2775319..2776638 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792017 YP_005200584.1 CDS Rahaq2_2593 NC_016818.1 2776730 2778181 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase; D-xylulose kinase 2776730..2778181 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792018 YP_005200585.1 CDS Rahaq2_2594 NC_016818.1 2778774 2779064 R PFAM: Antibiotic biosynthesis monooxygenase; hypothetical protein complement(2778774..2779064) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792019 YP_005200586.1 CDS Rahaq2_2595 NC_016818.1 2779068 2779943 R PFAM: DeoC/LacD family aldolase; DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme complement(2779068..2779943) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792020 YP_005200587.1 CDS Rahaq2_2596 NC_016818.1 2779963 2780979 R sugar ABC transporter periplasmic protein complement(2779963..2780979) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792021 YP_005200588.1 CDS Rahaq2_2597 NC_016818.1 2780993 2782018 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(2780993..2782018) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792022 YP_005200589.1 CDS Rahaq2_2598 NC_016818.1 2782018 2783094 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(2782018..2783094) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794063 YP_005200590.1 CDS Rahaq2_2599 NC_016818.1 2783088 2784650 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(2783088..2784650) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792023 YP_005200591.1 CDS Rahaq2_2600 NC_016818.1 2784882 2785856 D PFAM: Putative sugar-binding domain; transcriptional regulator with sigma factor-related N-terminal domain 2784882..2785856 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792024 YP_005200592.1 CDS Rahaq2_2601 NC_016818.1 2785927 2787519 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; pentulose/hexulose kinase 2785927..2787519 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792025 YP_005200593.1 CDS Rahaq2_2602 NC_016818.1 2787620 2787952 D hypothetical protein 2787620..2787952 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792026 YP_005200594.1 CDS Rahaq2_2603 NC_016818.1 2787932 2788843 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(2787932..2788843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792027 YP_005200595.1 CDS Rahaq2_2604 NC_016818.1 2789123 2790313 D PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A); multidrug resistance efflux pump 2789123..2790313 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792028 YP_005200596.1 CDS Rahaq2_2605 NC_016818.1 2790310 2791878 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 2790310..2791878 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792029 YP_005200597.1 CDS Rahaq2_2606 NC_016818.1 2791862 2793544 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family efflux transporter outer membrane lipoprotein 2791862..2793544 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792030 YP_005200598.1 CDS Rahaq2_2607 NC_016818.1 2793580 2794521 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus; DNA-binding domain-containing protein complement(2793580..2794521) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792031 YP_005200599.1 CDS Rahaq2_2608 NC_016818.1 2794685 2795518 D PFAM: short chain dehydrogenase; short-chain dehydrogenase 2794685..2795518 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794064 YP_005200600.1 CDS Rahaq2_2609 NC_016818.1 2795654 2796661 D PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); magnesium Mg(2+) and cobalt Co(2+) transport protein CorA 2795654..2796661 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792032 YP_005200601.1 CDS Rahaq2_2610 NC_016818.1 2796839 2797258 D hypothetical protein 2796839..2797258 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792033 YP_005200602.1 CDS Rahaq2_2611 NC_016818.1 2797360 2797701 D PFAM: Copper binding periplasmic protein CusF; hypothetical protein 2797360..2797701 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794065 YP_005200603.1 CDS Rahaq2_2612 NC_016818.1 2797716 2798969 D PFAM: Outer membrane efflux protein; outer membrane protein 2797716..2798969 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792034 YP_005200604.1 CDS Rahaq2_2613 NC_016818.1 2798969 2800210 D TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 2798969..2800210 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792035 YP_005200605.1 CDS Rahaq2_2614 NC_016818.1 2800207 2803335 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump 2800207..2803335 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792036 YP_005200606.1 CDS Rahaq2_2615 NC_016818.1 2803419 2804219 R PFAM: Integrase core domain; transposase complement(2803419..2804219) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792037 YP_005200607.1 CDS Rahaq2_2616 NC_016818.1 2804246 2804752 R hypothetical protein complement(2804246..2804752) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792038 YP_005200608.1 CDS Rahaq2_2617 NC_016818.1 2804942 2807368 R PFAM: Mechanosensitive ion channel; Protein of unknown function (DUF3772); small-conductance mechanosensitive channel complement(2804942..2807368) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792039 YP_005200609.1 CDS Rahaq2_2618 NC_016818.1 2807510 2808325 R hypothetical protein complement(2807510..2808325) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792040 YP_005200610.1 CDS Rahaq2_2619 NC_016818.1 2808350 2810011 R PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: cyclic peptide transporter; cyclic peptide transporter complement(2808350..2810011) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792041 YP_005200611.1 CDS Rahaq2_2620 NC_016818.1 2810091 2811479 R PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter; D-galactonate transporter complement(2810091..2811479) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792042 YP_005200612.1 CDS Rahaq2_2621 NC_016818.1 2811651 2812595 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2811651..2812595 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792043 YP_005200613.1 CDS Rahaq2_2622 NC_016818.1 2812595 2813881 D PFAM: Protein of unknown function (DUF445); hypothetical protein 2812595..2813881 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794066 YP_005200614.1 CDS Rahaq2_2623 NC_016818.1 2813952 2815049 R PFAM: Iron-containing alcohol dehydrogenase; glycerol dehydrogenase complement(2813952..2815049) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792044 YP_005200615.1 CDS Rahaq2_2624 NC_016818.1 2815440 2815622 D hypothetical protein 2815440..2815622 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792045 YP_005200616.1 CDS Rahaq2_2625 NC_016818.1 2815907 2817565 R PFAM: Periplasmic glucan biosynthesis protein, MdoG; periplasmic glucans biosynthesis protein complement(2815907..2817565) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794067 YP_005200617.1 CDS Rahaq2_2626 NC_016818.1 2817983 2819362 D PFAM: CoA-transferase family III; putative acyl-CoA transferase/carnitine dehydratase 2817983..2819362 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792046 YP_005200618.1 CDS Rahaq2_2627 NC_016818.1 2819359 2820210 R PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(2819359..2820210) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792047 YP_005200619.1 CDS Rahaq2_2628 NC_016818.1 2820471 2822309 D PFAM: Uncharacterized protein conserved in bacteria (DUF2264); hypothetical protein 2820471..2822309 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792048 YP_005200620.1 CDS Rahaq2_2629 NC_016818.1 2822338 2823627 D PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter; oligosaccharide:H+ symporter 2822338..2823627 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792049 YP_005200621.1 CDS Rahaq2_2630 NC_016818.1 2823624 2824814 D PFAM: Glycosyl Hydrolase Family 88; thioredoxin domain-containing protein 2823624..2824814 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792050 YP_005200622.1 CDS Rahaq2_2631 NC_016818.1 2825204 2825818 D PFAM: Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 2825204..2825818 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792051 YP_005200623.1 CDS Rahaq2_2632 NC_016818.1 2826071 2827771 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue; methyl-accepting chemotaxis protein 2826071..2827771 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792052 YP_005200624.1 CDS Rahaq2_2633 NC_016818.1 2827876 2828073 R PFAM: Dextransucrase DSRB; Dextransucrase DSRB complement(2827876..2828073) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792053 YP_005200625.1 CDS Rahaq2_2634 NC_016818.1 2828264 2828473 R PFAM: 'Cold-shock' DNA-binding domain; cold shock protein complement(2828264..2828473) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792054 YP_005200626.1 CDS Rahaq2_2635 NC_016818.1 2828772 2829695 R PFAM: Ion transport protein; Kef-type K+ ransport system NAD-binding protein complement(2828772..2829695) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794068 YP_005200627.1 CDS Rahaq2_2636 NC_016818.1 2829805 2830143 R hypothetical protein complement(2829805..2830143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792055 YP_005200628.1 CDS Rahaq2_2637 NC_016818.1 2830247 2831305 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent alcohol dehydrogenase complement(2830247..2831305) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794069 YP_005200629.1 CDS Rahaq2_2638 NC_016818.1 2831512 2832522 R PFAM: Domain of unknown function DUF20; putative permease complement(2831512..2832522) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792056 YP_005200630.1 CDS Rahaq2_2639 NC_016818.1 2832987 2833676 D PFAM: Protein of unknown function (DUF969); hypothetical protein 2832987..2833676 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792057 YP_005200631.1 CDS Rahaq2_2640 NC_016818.1 2833673 2834623 D PFAM: Protein of unknown function (DUF979); hypothetical protein 2833673..2834623 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792058 YP_005200632.1 CDS Rahaq2_2641 NC_016818.1 2834636 2835658 D PFAM: Protein of unknown function (DUF2891); hypothetical protein 2834636..2835658 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792059 YP_005200633.1 CDS Rahaq2_2642 NC_016818.1 2835702 2836493 R TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl carrier protein)--UDP-N-acetylglucosamine O-acyltransferase complement(2835702..2836493) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792060 YP_005200634.1 CDS Rahaq2_2643 NC_016818.1 2836851 2838485 D PFAM: Sulfatase; Domain of unknown function (DUF1705); putative membrane-associated, metal-dependent hydrolase 2836851..2838485 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792061 YP_005200635.1 CDS Rahaq2_2644 NC_016818.1 2838522 2839418 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2838522..2839418) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792062 YP_005200636.1 CDS Rahaq2_2645 NC_016818.1 2839564 2840070 D PFAM: Phenolic acid decarboxylase (PAD); phenolic acid decarboxylase 2839564..2840070 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792063 YP_005200637.1 CDS Rahaq2_2646 NC_016818.1 2840156 2841169 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(2840156..2841169) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794070 YP_005200638.1 CDS Rahaq2_2647 NC_016818.1 2841473 2842996 D PFAM: EAL domain; manually curated; EAL domain-containing protein 2841473..2842996 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792064 YP_005200639.1 CDS Rahaq2_2648 NC_016818.1 2843245 2844021 D PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator; hypothetical protein 2843245..2844021 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792065 YP_005200640.1 CDS Rahaq2_2650 NC_016818.1 2844402 2845670 D PFAM: Phage integrase family; Integrase 2844402..2845670 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792066 YP_005200641.1 CDS Rahaq2_2652 NC_016818.1 2846308 2847402 R PFAM: Acyltransferase family; putative acyltransferase complement(2846308..2847402) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792067 YP_005200642.1 CDS Rahaq2_2653 NC_016818.1 2847463 2849226 R PFAM: ABC transporter; ABC transporter transmembrane region; fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly complement(2847463..2849226) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792068 YP_005200643.1 CDS Rahaq2_2654 NC_016818.1 2849244 2850155 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(2849244..2850155) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792069 YP_005200644.1 CDS Rahaq2_2655 NC_016818.1 2850175 2851647 R hypothetical protein complement(2850175..2851647) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792070 YP_005200645.1 CDS Rahaq2_2656 NC_016818.1 2851690 2852622 R hypothetical protein complement(2851690..2852622) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792071 YP_005200646.1 CDS Rahaq2_2657 NC_016818.1 2852654 2854123 R hypothetical protein complement(2852654..2854123) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792072 YP_005200647.1 CDS Rahaq2_2658 NC_016818.1 2854380 2854961 D PFAM: Autoinducer synthetase; N-acyl-L-homoserine lactone synthetase 2854380..2854961 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792073 YP_005200648.1 CDS Rahaq2_2659 NC_016818.1 2854954 2855640 R PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain; DNA-binding protein complement(2854954..2855640) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794073 YP_005200649.1 CDS Rahaq2_2662 NC_016818.1 2856915 2857217 D PFAM: TrbM; TrbM 2856915..2857217 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792076 YP_005200650.1 CDS Rahaq2_2663 NC_016818.1 2857236 2857541 D hypothetical protein 2857236..2857541 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792077 YP_005200651.1 CDS Rahaq2_2664 NC_016818.1 2858289 2860163 D hypothetical protein 2858289..2860163 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792078 YP_005200652.1 CDS Rahaq2_2665 NC_016818.1 2860172 2860921 D hypothetical protein 2860172..2860921 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792079 YP_005200653.1 CDS Rahaq2_2666 NC_016818.1 2861029 2861316 D hypothetical protein 2861029..2861316 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792080 YP_005200654.1 CDS Rahaq2_2667 NC_016818.1 2861697 2863193 D hypothetical protein 2861697..2863193 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792081 YP_005200655.1 CDS Rahaq2_2668 NC_016818.1 2863177 2863797 D TIGRFAM: TIGR02646 family protein; hypothetical protein 2863177..2863797 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792082 YP_005200656.1 CDS Rahaq2_2670 NC_016818.1 2864175 2864705 R acetyltransferase, ribosomal protein N-acetylase complement(2864175..2864705) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792084 YP_005200657.1 CDS Rahaq2_2671 NC_016818.1 2865102 2866061 D hypothetical protein 2865102..2866061 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794074 YP_005200658.1 CDS Rahaq2_2672 NC_016818.1 2866484 2867722 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase IS116/IS110/IS902 family 2866484..2867722 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792085 YP_005200659.1 CDS Rahaq2_2673 NC_016818.1 2867811 2868248 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase complement(2867811..2868248) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792086 YP_005200660.1 CDS Rahaq2_2674 NC_016818.1 2868356 2869180 R PFAM: Integrase core domain; manually curated; transposase complement(2868356..2869180) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792087 YP_005200661.1 CDS Rahaq2_2677 NC_016818.1 2869566 2869862 R PFAM: Barstar (barnase inhibitor); Barstar, RNAse (barnase) inhibitor complement(2869566..2869862) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794075 YP_005200662.1 CDS Rahaq2_2678 NC_016818.1 2870060 2870470 R hypothetical protein complement(2870060..2870470) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792089 YP_005200663.1 CDS Rahaq2_2679 NC_016818.1 2871124 2871231 R hypothetical protein complement(2871124..2871231) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792090 YP_005200664.1 CDS Rahaq2_2680 NC_016818.1 2871326 2871556 D hypothetical protein 2871326..2871556 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792091 YP_005200665.1 CDS Rahaq2_2681 NC_016818.1 2871813 2872871 R hypothetical protein complement(2871813..2872871) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792092 YP_005200666.1 CDS Rahaq2_2682 NC_016818.1 2873539 2874543 D PFAM: Taurine catabolism dioxygenase TauD, TfdA family; Taurine catabolism dioxygenase TauD, TfdA family 2873539..2874543 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792093 YP_005200667.1 CDS Rahaq2_2683 NC_016818.1 2874555 2875472 D PFAM: Membrane transport protein; putative permease 2874555..2875472 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794076 YP_005200668.1 CDS Rahaq2_2684 NC_016818.1 2875574 2875963 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase complement(2875574..2875963) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792094 YP_005200669.1 CDS Rahaq2_2685 NC_016818.1 2876056 2876775 R hypothetical protein complement(2876056..2876775) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792095 YP_005200670.1 CDS Rahaq2_2686 NC_016818.1 2877091 2877444 D PFAM: Fels-1 Prophage Protein-like; Fels-1 Prophage Protein 2877091..2877444 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792096 YP_005200671.1 CDS Rahaq2_2687 NC_016818.1 2877627 2878175 R PFAM: Inclusion body protein; Inclusion body protein complement(2877627..2878175) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792097 YP_005200672.1 CDS Rahaq2_2689 NC_016818.1 2879473 2882238 R PFAM: Protein of unknown function (DUF3442); Invasin, domain 3; hypothetical protein complement(2879473..2882238) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794077 YP_005200673.1 CDS Rahaq2_2691 NC_016818.1 2883471 2885012 D hypothetical protein 2883471..2885012 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792100 YP_005200674.1 CDS Rahaq2_2692 NC_016818.1 2885134 2886102 D PFAM: Bacterial Ig-like domain (group 1); Ig-like domain-containing protein 2885134..2886102 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792101 YP_005200675.1 CDS Rahaq2_2693 NC_016818.1 2886104 2886532 D hypothetical protein 2886104..2886532 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792102 YP_005200676.1 CDS Rahaq2_2694 NC_016818.1 2886635 2887330 D hypothetical protein 2886635..2887330 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792103 YP_005200677.1 CDS Rahaq2_2695 NC_016818.1 2887344 2888678 D hypothetical protein 2887344..2888678 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794078 YP_005200678.1 CDS Rahaq2_2697 NC_016818.1 2891539 2892357 D PFAM: Response regulator receiver domain; response regulator containing a CheY-like receiver domain and a GGDEF domain 2891539..2892357 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792105 YP_005200679.1 CDS Rahaq2_2698 NC_016818.1 2892414 2894849 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain; histidine kinase 2892414..2894849 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792106 YP_005200680.1 CDS Rahaq2_2699 NC_016818.1 2895448 2895939 D PFAM: Protein of unknown function (DUF1401); hypothetical protein 2895448..2895939 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792107 YP_005200681.1 CDS Rahaq2_2700 NC_016818.1 2896070 2897008 D PFAM: Putative lysophospholipase; Putative lysophospholipase 2896070..2897008 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794079 YP_005200682.1 CDS Rahaq2_2701 NC_016818.1 2897436 2898347 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2897436..2898347) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792108 YP_005200683.1 CDS Rahaq2_2705 NC_016818.1 2899735 2900235 R PFAM: AsnC family; transcriptional regulator complement(2899735..2900235) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792112 YP_005200684.1 CDS Rahaq2_2706 NC_016818.1 2900469 2901071 D PFAM: LysE type translocator; putative threonine efflux protein 2900469..2901071 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792113 YP_005200685.1 CDS Rahaq2_2708 NC_016818.1 2901580 2902335 R PFAM: short chain dehydrogenase; short-chain dehydrogenase complement(2901580..2902335) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792115 YP_005200686.1 CDS Rahaq2_2709 NC_016818.1 2902452 2903048 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 2902452..2903048 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792116 YP_005200687.1 CDS Rahaq2_2710 NC_016818.1 2904105 2905775 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 2904105..2905775 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792117 YP_005200688.1 CDS Rahaq2_2711 NC_016818.1 2906060 2906341 D hypothetical protein 2906060..2906341 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792118 YP_005200689.1 CDS Rahaq2_2712 NC_016818.1 2906494 2906760 D hypothetical protein 2906494..2906760 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794080 YP_005200690.1 CDS Rahaq2_2713 NC_016818.1 2906854 2907849 R PFAM: alpha/beta hydrolase fold; esterase/lipase complement(2906854..2907849) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792119 YP_005200691.1 CDS Rahaq2_2715 NC_016818.1 2908283 2909209 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2908283..2909209) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792121 YP_005200692.1 CDS Rahaq2_2716 NC_016818.1 2909392 2910555 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; L-alanine-DL-glutamate epimerase-like protein 2909392..2910555 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792122 YP_005200693.1 CDS Rahaq2_2717 NC_016818.1 2910865 2911638 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(2910865..2911638) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792123 YP_005200694.1 CDS Rahaq2_2718 NC_016818.1 2911640 2912389 D PFAM: NADP oxidoreductase coenzyme F420-dependent; putative dinucleotide-binding enzyme 2911640..2912389 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792124 YP_005200695.1 CDS Rahaq2_2719 NC_016818.1 2912512 2913192 R hypothetical protein complement(2912512..2913192) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792125 YP_005200696.1 CDS Rahaq2_2720 NC_016818.1 2913337 2913954 R PFAM: Thymidylate kinase; manually curated; thymidylate kinase complement(2913337..2913954) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792126 YP_005200697.1 CDS Rahaq2_2721 NC_016818.1 2914054 2914452 R PFAM: HxlR-like helix-turn-helix; putative transcriptional regulator complement(2914054..2914452) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792127 YP_005200698.1 CDS Rahaq2_2722 NC_016818.1 2914552 2915283 D PFAM: short chain dehydrogenase; dehydrogenase 2914552..2915283 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792128 YP_005200699.1 CDS Rahaq2_2723 NC_016818.1 2915417 2915659 D hypothetical protein 2915417..2915659 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792129 YP_005200700.1 CDS Rahaq2_2724 NC_016818.1 2915656 2915919 D hypothetical protein 2915656..2915919 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792130 YP_005200701.1 CDS Rahaq2_2725 NC_016818.1 2915922 2916542 D PFAM: Methyltransferase domain; methyltransferase family protein 2915922..2916542 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792131 YP_005200702.1 CDS Rahaq2_2726 NC_016818.1 2916708 2917739 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent oxidoreductase complement(2916708..2917739) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792132 YP_005200703.1 CDS Rahaq2_2727 NC_016818.1 2917815 2918717 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2917815..2918717 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792133 YP_005200704.1 CDS Rahaq2_2728 NC_016818.1 2918877 2919269 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; putative ring-cleavage extradiol dioxygenase complement(2918877..2919269) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794081 YP_005200705.1 CDS Rahaq2_2729 NC_016818.1 2919460 2919897 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase complement(2919460..2919897) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792134 YP_005200706.1 CDS Rahaq2_2730 NC_016818.1 2920160 2920456 D PFAM: Barstar (barnase inhibitor); Barstar, RNAse (barnase) inhibitor 2920160..2920456 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792135 YP_005200707.1 CDS Rahaq2_2731 NC_016818.1 2920793 2921716 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(2920793..2921716) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792136 YP_005200708.1 CDS Rahaq2_2732 NC_016818.1 2921838 2923277 D PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase 2921838..2923277 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792137 YP_005200709.1 CDS Rahaq2_2733 NC_016818.1 2923319 2923645 D PFAM: Carboxymuconolactone decarboxylase family; gamma-carboxymuconolactone decarboxylase subunit like protein 2923319..2923645 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794082 YP_005200710.1 CDS Rahaq2_2734 NC_016818.1 2923686 2924666 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family; putative NAD(P)H quinone oxidoreductase, PIG3 family 2923686..2924666 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792138 YP_005200711.1 CDS Rahaq2_2735 NC_016818.1 2925084 2925614 D acetyltransferase, ribosomal protein N-acetylase 2925084..2925614 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792139 YP_005200712.1 CDS Rahaq2_2736 NC_016818.1 2925614 2925831 D For manual analysis, pseudo or ribosomal slippage, gene with one frameshift, more than 80% of the length of the second shortest homolog; manually curated; hypothetical protein join(2925614..2925673,2925673..2925831) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792140 YP_005200713.1 CDS Rahaq2_2737 NC_016818.1 2926070 2926507 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase 2926070..2926507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792141 YP_005200714.1 CDS Rahaq2_2738 NC_016818.1 2926778 2927167 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; putative lactoylglutathione lyase complement(2926778..2927167) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792142 YP_005200715.1 CDS Rahaq2_2739 NC_016818.1 2927506 2927943 R hypothetical protein complement(2927506..2927943) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792143 YP_005200716.1 CDS Rahaq2_2740 NC_016818.1 2927994 2929382 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(2927994..2929382) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792144 YP_005200717.1 CDS Rahaq2_2741 NC_016818.1 2929382 2930059 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(2929382..2930059) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792145 YP_005200718.1 CDS Rahaq2_2742 NC_016818.1 2930266 2931102 D PFAM: MltA-interacting protein MipA; outer membrane protein V 2930266..2931102 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792146 YP_005200719.1 CDS Rahaq2_2743 NC_016818.1 2931374 2931550 R hypothetical protein complement(2931374..2931550) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792147 YP_005200720.1 CDS Rahaq2_2745 NC_016818.1 2932138 2932290 R hypothetical protein complement(2932138..2932290) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792149 YP_005200721.1 CDS Rahaq2_2746 NC_016818.1 2932318 2935266 R TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(2932318..2935266) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792150 YP_005200722.1 CDS Rahaq2_2747 NC_016818.1 2935319 2939746 R PFAM: Insecticide toxin TcdB middle/C-terminal region; Insecticide toxin TcdB middle/N-terminal region; Salmonella virulence plasmid 65kDa B protein; virulence plasmid B protein complement(2935319..2939746) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792151 YP_005200723.1 CDS Rahaq2_2748 NC_016818.1 2939775 2944229 R hypothetical protein complement(2939775..2944229) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794083 YP_005200724.1 CDS Rahaq2_2749 NC_016818.1 2944341 2947223 R PFAM: Salmonella virulence plasmid 28.1kDa A protein; virulence plasmid 28 protein complement(2944341..2947223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792152 YP_005200725.1 CDS Rahaq2_2750 NC_016818.1 2947491 2948354 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 2947491..2948354 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792153 YP_005200726.1 CDS Rahaq2_2751 NC_016818.1 2948484 2951483 R TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(2948484..2951483) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792154 YP_005200727.1 CDS Rahaq2_2752 NC_016818.1 2951512 2954463 R TIGRFAM: RHS repeat-associated core domain; RHS repeat-associated core domain-containing protein complement(2951512..2954463) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792155 YP_005200728.1 CDS Rahaq2_2753 NC_016818.1 2954497 2958891 R PFAM: Insecticide toxin TcdB middle/C-terminal region; Insecticide toxin TcdB middle/N-terminal region; Salmonella virulence plasmid 65kDa B protein; virulence plasmid B protein complement(2954497..2958891) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794084 YP_005200729.1 CDS Rahaq2_2754 NC_016818.1 2958940 2963391 R hypothetical protein complement(2958940..2963391) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794085 YP_005200730.1 CDS Rahaq2_2755 NC_016818.1 2963432 2967712 R PFAM: Salmonella virulence plasmid 28.1kDa A protein; virulence plasmid 28 protein complement(2963432..2967712) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792156 YP_005200731.1 CDS Rahaq2_2756 NC_016818.1 2968012 2968668 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type metal ion transport system permease complement(2968012..2968668) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792157 YP_005200732.1 CDS Rahaq2_2757 NC_016818.1 2968649 2969815 R PFAM: ABC transporter; NIL domain; metal ion ABC transporter ATPase complement(2968649..2969815) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792158 YP_005200733.1 CDS Rahaq2_2758 NC_016818.1 2969827 2970669 R PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; lipoprotein complement(2969827..2970669) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792159 YP_005200734.1 CDS Rahaq2_2759 NC_016818.1 2970918 2973224 R PFAM: Sulfatase; phosphoglycerol transferase family protein, alkaline phosphatase superfamily complement(2970918..2973224) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792160 YP_005200735.1 CDS Rahaq2_2760 NC_016818.1 2973640 2974356 R PFAM: ABC transporter; branched-chain amino acid ABC transporter ATPase complement(2973640..2974356) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792161 YP_005200736.1 CDS Rahaq2_2761 NC_016818.1 2974353 2975246 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; branched-chain amino acid ABC transporter ATPase complement(2974353..2975246) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792162 YP_005200737.1 CDS Rahaq2_2762 NC_016818.1 2975243 2976532 R PFAM: Domain of unknown function (DUF3382); Branched-chain amino acid transport system / permease component; branched-chain amino acid ABC transporter permease complement(2975243..2976532) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792163 YP_005200738.1 CDS Rahaq2_2763 NC_016818.1 2976543 2977457 R PFAM: Branched-chain amino acid transport system / permease component; branched-chain amino acid ABC transporter permease complement(2976543..2977457) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792164 YP_005200739.1 CDS Rahaq2_2764 NC_016818.1 2977591 2978718 R PFAM: Receptor family ligand binding region; branched-chain amino acid ABC transporter periplasmic protein complement(2977591..2978718) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792165 YP_005200740.1 CDS Rahaq2_2765 NC_016818.1 2979130 2979345 D PFAM: Bacterial protein of unknown function (DUF903); hypothetical protein 2979130..2979345 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792166 YP_005200741.1 CDS Rahaq2_2766 NC_016818.1 2979408 2980382 R PFAM: Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(2979408..2980382) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792167 YP_005200742.1 CDS Rahaq2_2767 NC_016818.1 2980594 2982693 R PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; bacteriocin/lantibiotic ABC transporter complement(2980594..2982693) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792168 YP_005200743.1 CDS Rahaq2_2768 NC_016818.1 2982680 2984026 R PFAM: HlyD family secretion protein; multidrug resistance efflux pump complement(2982680..2984026) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792169 YP_005200744.1 CDS Rahaq2_2769 NC_016818.1 2984392 2984583 D hypothetical protein 2984392..2984583 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792170 YP_005200745.1 CDS Rahaq2_2770 NC_016818.1 2984828 2987338 D PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; Rhs element Vgr protein 2984828..2987338 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792171 YP_005200746.1 CDS Rahaq2_2771 NC_016818.1 2987335 2988597 D PFAM: VRR-NUC domain; VRR-NUC domain-containing protein 2987335..2988597 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792172 YP_005200747.1 CDS Rahaq2_2772 NC_016818.1 2988611 2989810 D PFAM: Protein of unknown function (DUF3396); mevalonate pyrophosphate decarboxylase 2988611..2989810 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794086 YP_005200748.1 CDS Rahaq2_2773 NC_016818.1 2989853 2991055 D PFAM: Protein of unknown function (DUF3396); hypothetical protein 2989853..2991055 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792173 YP_005200749.1 CDS Rahaq2_2775 NC_016818.1 2991393 2992460 R PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein; hypothetical protein complement(2991393..2992460) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792175 YP_005200750.1 CDS Rahaq2_2776 NC_016818.1 2992457 2993854 R PFAM: YcjX-like family, DUF463; putative ATPase complement(2992457..2993854) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792176 YP_005200751.1 CDS Rahaq2_2777 NC_016818.1 2993829 2994080 R PFAM: Phage shock protein PspD (Phageshock_PspD); TIGRFAM: phage shock protein PspD; Phage shock protein PspD (Phageshock_PspD) complement(2993829..2994080) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794087 YP_005200752.1 CDS Rahaq2_2778 NC_016818.1 2994165 2994524 R PFAM: PspC domain; TIGRFAM: phage shock protein C; phage shock protein C complement(2994165..2994524) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792177 YP_005200753.1 CDS Rahaq2_2779 NC_016818.1 2994524 2994751 R PFAM: Phage shock protein B; TIGRFAM: phage shock protein B; phage shock protein B complement(2994524..2994751) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792178 YP_005200754.1 CDS Rahaq2_2780 NC_016818.1 2994843 2995514 R PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A; phage shock protein A complement(2994843..2995514) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792179 YP_005200755.1 CDS Rahaq2_2781 NC_016818.1 2995748 2996749 D PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: psp operon transcriptional activator PspF; psp operon transcriptional activator PspF 2995748..2996749 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792180 YP_005200756.1 CDS Rahaq2_2783 NC_016818.1 2997042 2998796 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 2997042..2998796 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792182 YP_005200757.1 CDS Rahaq2_2784 NC_016818.1 2998793 2999758 D PFAM: Binding-protein-dependent transport system inner membrane component; antimicrobial peptide ABC transporter permease 2998793..2999758 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792183 YP_005200758.1 CDS Rahaq2_2785 NC_016818.1 2999745 3000635 D PFAM: Binding-protein-dependent transport system inner membrane component; antimicrobial peptide ABC transporter permease 2999745..3000635 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792184 YP_005200759.1 CDS Rahaq2_2786 NC_016818.1 3000635 3001627 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 3000635..3001627 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792185 YP_005200760.1 CDS Rahaq2_2787 NC_016818.1 3001627 3002436 D PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 3001627..3002436 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792186 YP_005200761.1 CDS Rahaq2_2788 NC_016818.1 3002643 3003845 D PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; putative peroxidase-related enzyme 3002643..3003845 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792187 YP_005200762.1 CDS Rahaq2_2789 NC_016818.1 3004428 3005939 D PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; amino acid/peptide transporter (peptide:H symporter) 3004428..3005939 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792188 YP_005200763.1 CDS Rahaq2_2790 NC_016818.1 3006283 3006651 R hypothetical protein complement(3006283..3006651) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792189 YP_005200764.1 CDS Rahaq2_2791 NC_016818.1 3006704 3008599 R PFAM: GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein complement(3006704..3008599) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792190 YP_005200765.1 CDS Rahaq2_2792 NC_016818.1 3008765 3009838 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(3008765..3009838) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792191 YP_005200766.1 CDS Rahaq2_2793 NC_016818.1 3010101 3010373 D hypothetical protein 3010101..3010373 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794088 YP_005200767.1 CDS Rahaq2_2794 NC_016818.1 3010945 3012618 D PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 3010945..3012618 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794089 YP_005200768.1 CDS Rahaq2_2795 NC_016818.1 3012743 3013609 D PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 3012743..3013609 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792192 YP_005200769.1 CDS Rahaq2_2796 NC_016818.1 3013773 3014378 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase 3013773..3014378 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792193 YP_005200770.1 CDS Rahaq2_2797 NC_016818.1 3014470 3015330 R PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: pyridoxal kinase; pyridoxal kinase complement(3014470..3015330) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792194 YP_005200771.1 CDS Rahaq2_2798 NC_016818.1 3015435 3016709 R PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(3015435..3016709) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792195 YP_005200772.1 CDS Rahaq2_2799 NC_016818.1 3016873 3017538 R PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; pyridoxamine-phosphate oxidase complement(3016873..3017538) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792196 YP_005200773.1 CDS Rahaq2_2800 NC_016818.1 3017668 3017979 R PFAM: Membrane-bound lysozyme-inhibitor of c-type lysozyme; hypothetical protein complement(3017668..3017979) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794090 YP_005200774.1 CDS Rahaq2_2801 NC_016818.1 3018064 3019182 R PFAM: Uncharacterised protein family (UPF0075); molecular chaperone complement(3018064..3019182) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792197 YP_005200775.1 CDS Rahaq2_2802 NC_016818.1 3019580 3020050 D PFAM: Rickettsia 17 kDa surface antigen; outer membrane lipoprotein 3019580..3020050 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792198 YP_005200776.1 CDS Rahaq2_2803 NC_016818.1 3020163 3020597 R PFAM: MarR family; transcriptional regulator complement(3020163..3020597) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792199 YP_005200777.1 CDS Rahaq2_2804 NC_016818.1 3020705 3021016 D PFAM: Protein of unknown function (DUF1656); hypothetical protein 3020705..3021016 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792200 YP_005200778.1 CDS Rahaq2_2805 NC_016818.1 3021018 3021875 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 3021018..3021875 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792201 YP_005200779.1 CDS Rahaq2_2806 NC_016818.1 3021885 3023927 D PFAM: Fusaric acid resistance protein family; hypothetical protein 3021885..3023927 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792202 YP_005200780.1 CDS Rahaq2_2807 NC_016818.1 3023933 3024829 R PFAM: Aldo/keto reductase family; putative oxidoreductase complement(3023933..3024829) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792203 YP_005200781.1 CDS Rahaq2_2808 NC_016818.1 3024959 3025198 R PFAM: Protein of unknown function (DUF1289); putative Fe-S protein complement(3024959..3025198) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792204 YP_005200782.1 CDS Rahaq2_2809 NC_016818.1 3025612 3026703 D PFAM: NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase 3025612..3026703 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792205 YP_005200783.1 CDS Rahaq2_2810 NC_016818.1 3026866 3027273 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase; lactoylglutathione lyase 3026866..3027273 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794091 YP_005200784.1 CDS Rahaq2_2811 NC_016818.1 3027366 3028082 D PFAM: Exonuclease; TIGRFAM: ribonuclease T; ribonuclease T 3027366..3028082 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794092 YP_005200785.1 CDS Rahaq2_2812 NC_016818.1 3028174 3028515 R PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; monothiol glutaredoxin complement(3028174..3028515) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792206 YP_005200786.1 CDS Rahaq2_2813 NC_016818.1 3028978 3029877 D PFAM: NlpC/P60 family; cell wall-associated hydrolase 3028978..3029877 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792207 YP_005200787.1 CDS Rahaq2_2814 NC_016818.1 3030466 3031491 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 3030466..3031491 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792208 YP_005200788.1 CDS Rahaq2_2815 NC_016818.1 3031527 3032432 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(3031527..3032432) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792209 YP_005200789.1 CDS Rahaq2_2816 NC_016818.1 3032569 3033780 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; Bcr/CflA family multidrug resistance transporter 3032569..3033780 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792210 YP_005200790.1 CDS Rahaq2_2817 NC_016818.1 3034143 3035294 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase, cyclopropane fatty acid synthase 3034143..3035294 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792211 YP_005200791.1 CDS Rahaq2_2818 NC_016818.1 3035367 3036020 R PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(3035367..3036020) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792212 YP_005200792.1 CDS Rahaq2_2819 NC_016818.1 3036275 3037648 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 3036275..3037648 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792213 YP_005200793.1 CDS Rahaq2_2822 NC_016818.1 3038597 3040009 D PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 3038597..3040009 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792216 YP_005200794.1 CDS Rahaq2_2823 NC_016818.1 3040303 3040539 D PFAM: Repeated sequence found in lipoprotein LPP; murein lipoprotein 3040303..3040539 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794093 YP_005200795.1 CDS Rahaq2_2824 NC_016818.1 3040748 3041761 R PFAM: L,D-transpeptidase catalytic domain; hypothetical protein complement(3040748..3041761) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792217 YP_005200796.1 CDS Rahaq2_2825 NC_016818.1 3042023 3042436 R PFAM: Fe-S metabolism associated domain; SufE protein probably involved in Fe-S center assembly complement(3042023..3042436) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792218 YP_005200797.1 CDS Rahaq2_2826 NC_016818.1 3042465 3043685 R PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; cysteine desulfurase-like protein, SufS subfamily complement(3042465..3043685) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792219 YP_005200798.1 CDS Rahaq2_2827 NC_016818.1 3043685 3044986 R PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; FeS assembly protein SufD complement(3043685..3044986) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792220 YP_005200799.1 CDS Rahaq2_2828 NC_016818.1 3044961 3045707 R PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; FeS assembly ATPase SufC complement(3044961..3045707) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794094 YP_005200800.1 CDS Rahaq2_2829 NC_016818.1 3045831 3047354 R PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; FeS assembly protein SufB complement(3045831..3047354) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792221 YP_005200801.1 CDS Rahaq2_2830 NC_016818.1 3047401 3047772 R PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: FeS assembly scaffold SufA; Iron-sulfur cluster assembly accessory protein; FeS assembly scaffold SufA complement(3047401..3047772) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792222 YP_005200802.1 CDS Rahaq2_2831 NC_016818.1 3048230 3048634 D hypothetical protein 3048230..3048634 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792223 YP_005200803.1 CDS Rahaq2_2832 NC_016818.1 3048749 3049168 R PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; hypothetical protein complement(3048749..3049168) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792224 YP_005200804.1 CDS Rahaq2_2833 NC_016818.1 3049188 3052244 R PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; FAD/FMN-dependent dehydrogenase complement(3049188..3052244) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792225 YP_005200805.1 CDS Rahaq2_2834 NC_016818.1 3052327 3052569 R hypothetical protein complement(3052327..3052569) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792226 YP_005200806.1 CDS Rahaq2_2835 NC_016818.1 3052572 3053669 D PFAM: Domain of unknown function DUF20; putative permease 3052572..3053669 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792227 YP_005200807.1 CDS Rahaq2_2836 NC_016818.1 3054102 3056477 R PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; phosphoenolpyruvate synthase complement(3054102..3056477) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792228 YP_005200808.1 CDS Rahaq2_2837 NC_016818.1 3056986 3057807 D PFAM: Domain of unknown function (DUF299); hypothetical protein 3056986..3057807 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792229 YP_005200809.1 CDS Rahaq2_2838 NC_016818.1 3057937 3058983 D PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase 3057937..3058983 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794095 YP_005200810.1 CDS Rahaq2_2839 NC_016818.1 3059322 3060356 D PFAM: Haemin-degrading HenS.ChuX domain; putative heme degradation protein 3059322..3060356 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792230 YP_005200811.1 CDS Rahaq2_2840 NC_016818.1 3060353 3061183 D PFAM: Periplasmic binding protein; hemin ABC transporter periplasmic protein 3060353..3061183 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792231 YP_005200812.1 CDS Rahaq2_2841 NC_016818.1 3061180 3062208 D PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 3061180..3062208 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792232 YP_005200813.1 CDS Rahaq2_2842 NC_016818.1 3062201 3062989 D PFAM: ABC transporter; hemin ABC transporter ATPase 3062201..3062989 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792233 YP_005200814.1 CDS Rahaq2_2843 NC_016818.1 3063036 3064490 R PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein complement(3063036..3064490) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792234 YP_005200815.1 CDS Rahaq2_2844 NC_016818.1 3064629 3065357 R PFAM: EAL domain; EAL domain-containing protein complement(3064629..3065357) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792235 YP_005200816.1 CDS Rahaq2_2845 NC_016818.1 3065944 3066957 R PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase; lipoyltransferase and lipoate-protein ligase complement(3065944..3066957) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792236 YP_005200817.1 CDS Rahaq2_2846 NC_016818.1 3067054 3067533 R PFAM: NlpC/P60 family; cell wall-associated hydrolase complement(3067054..3067533) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792237 YP_005200818.1 CDS Rahaq2_2847 NC_016818.1 3067688 3068077 R PFAM: EamA-like transporter family; EamA-like transporter family complement(3067688..3068077) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792238 YP_005200819.1 CDS Rahaq2_2848 NC_016818.1 3068074 3068406 R PFAM: EamA-like transporter family; EamA-like transporter family complement(3068074..3068406) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792239 YP_005200820.1 CDS Rahaq2_2849 NC_016818.1 3068403 3070073 R PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase complement(3068403..3070073) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792240 YP_005200821.1 CDS Rahaq2_2850 NC_016818.1 3070073 3070972 R PFAM: Polysaccharide deacetylase; putative xylanase/chitin deacetylase complement(3070073..3070972) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794096 YP_005200822.1 CDS Rahaq2_2851 NC_016818.1 3070986 3072968 R PFAM: NAD dependent epimerase/dehydratase family; Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(3070986..3072968) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794097 YP_005200823.1 CDS Rahaq2_2852 NC_016818.1 3072968 3073948 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(3072968..3073948) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792241 YP_005200824.1 CDS Rahaq2_2853 NC_016818.1 3073948 3075090 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; putative PLP-dependent enzyme possibly involved in cell wall biogenesis complement(3073948..3075090) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792242 YP_005200825.1 CDS Rahaq2_2854 NC_016818.1 3075451 3076200 R PFAM: ABC transporter; ABC-type cobalamin transport system, ATPase component complement(3075451..3076200) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792243 YP_005200826.1 CDS Rahaq2_2855 NC_016818.1 3076220 3076771 R PFAM: Glutathione peroxidase; glutathione peroxidase complement(3076220..3076771) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792244 YP_005200827.1 CDS Rahaq2_2856 NC_016818.1 3076845 3077852 R PFAM: FecCD transport family; ABC-type cobalamin transport system, permease component complement(3076845..3077852) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792245 YP_005200828.1 CDS Rahaq2_2857 NC_016818.1 3078005 3078394 R PFAM: Protein of unknown function (DUF2502); hypothetical protein complement(3078005..3078394) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792246 YP_005200829.1 CDS Rahaq2_2858 NC_016818.1 3078667 3078813 D hypothetical protein 3078667..3078813 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792247 YP_005200830.1 CDS Rahaq2_2859 NC_016818.1 3079163 3079459 R PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; integration host factor subunit alpha complement(3079163..3079459) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792248 YP_005200831.1 CDS Rahaq2_2860 NC_016818.1 3079464 3081851 R PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta complement(3079464..3081851) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792249 YP_005200832.1 CDS Rahaq2_2861 NC_016818.1 3081866 3082849 R PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha complement(3081866..3082849) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792250 YP_005200833.1 CDS Rahaq2_2862 NC_016818.1 3083201 3083557 R PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 complement(3083201..3083557) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792251 YP_005200834.1 CDS Rahaq2_2865 NC_016818.1 3083893 3084444 R PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; manually curated; non-canonical start codon; translation initiation factor IF-3 complement(3083893..3084444) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792252 YP_005200835.1 CDS Rahaq2_2866 NC_016818.1 3084448 3086376 R PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; threonyl-tRNA synthetase complement(3084448..3086376) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792253 YP_005200836.1 CDS Rahaq2_2867 NC_016818.1 3086666 3087346 D PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; membrane protein, MarC family 3086666..3087346 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792254 YP_005200837.1 CDS Rahaq2_2868 NC_016818.1 3087370 3088005 R PFAM: Transglycosylase SLT domain; lytic murein transglycosylase complement(3087370..3088005) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792255 YP_005200838.1 CDS Rahaq2_2869 NC_016818.1 3088328 3089197 D PFAM: Fructosamine kinase; fructosamine-3-kinase 3088328..3089197 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792256 YP_005200839.1 CDS Rahaq2_2870 NC_016818.1 3089303 3089851 R hypothetical protein complement(3089303..3089851) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792257 YP_005200840.1 CDS Rahaq2_2871 NC_016818.1 3090046 3090711 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily protein 3090046..3090711 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792258 YP_005200841.1 CDS Rahaq2_2872 NC_016818.1 3091021 3091857 D PFAM: KduI/IolB family; 5-keto 4-deoxyuronate isomerase 3091021..3091857 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792259 YP_005200842.1 CDS Rahaq2_2873 NC_016818.1 3091936 3092697 D PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; 2-deoxy-D-gluconate 3-dehydrogenase 3091936..3092697 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792260 YP_005200843.1 CDS Rahaq2_2874 NC_016818.1 3092850 3093407 D PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); putative membrane-bound metal-dependent hydrolase 3092850..3093407 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792261 YP_005200844.1 CDS Rahaq2_2875 NC_016818.1 3093596 3094987 D PFAM: Sodium:dicarboxylate symporter family; putative Na+/dicarboxylate symporter 3093596..3094987 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792262 YP_005200845.1 CDS Rahaq2_2876 NC_016818.1 3095076 3095867 R PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; transcriptional regulator complement(3095076..3095867) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792263 YP_005200846.1 CDS Rahaq2_2877 NC_016818.1 3096105 3097502 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; arabinose efflux permease family protein 3096105..3097502 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792264 YP_005200847.1 CDS Rahaq2_2878 NC_016818.1 3097559 3098440 R PFAM: Peptidase family M48; Zn-dependent protease with chaperone function complement(3097559..3098440) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792265 YP_005200848.1 CDS Rahaq2_2879 NC_016818.1 3098733 3100805 R PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); C-terminal processing peptidase complement(3098733..3100805) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792266 YP_005200849.1 CDS Rahaq2_2880 NC_016818.1 3100825 3101514 R PFAM: ProQ/FINO family; activator of osmoprotectant transporter ProP complement(3100825..3101514) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792267 YP_005200850.1 CDS Rahaq2_2881 NC_016818.1 3101610 3102107 R GAF domain-containing protein complement(3101610..3102107) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792268 YP_005200851.1 CDS Rahaq2_2882 NC_016818.1 3102365 3103612 D PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; PqiA family integral membrane protein 3102365..3103612 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792269 YP_005200852.1 CDS Rahaq2_2883 NC_016818.1 3103581 3106211 D PFAM: mce related protein; qaraquat-inducible protein B 3103581..3106211 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792270 YP_005200853.1 CDS Rahaq2_2884 NC_016818.1 3106296 3107813 D PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase; NOL1/NOP2/sun family putative RNA methylase 3106296..3107813 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792271 YP_005200854.1 CDS Rahaq2_2885 NC_016818.1 3108184 3109905 D PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 3108184..3109905 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792272 YP_005200855.1 CDS Rahaq2_2886 NC_016818.1 3110099 3110341 D PFAM: Protein of unknown function (DUF1480); hypothetical protein 3110099..3110341 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792273 YP_005200856.1 CDS Rahaq2_2887 NC_016818.1 3110385 3111035 R hypothetical protein complement(3110385..3111035) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792274 YP_005200857.1 CDS Rahaq2_2888 NC_016818.1 3111130 3111522 R PFAM: ASCH domain; hypothetical protein complement(3111130..3111522) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792275 YP_005200858.1 CDS Rahaq2_2889 NC_016818.1 3111620 3114460 R PFAM: KWG Leptospira; KWG repeat-containing protein complement(3111620..3114460) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794099 YP_005200859.1 CDS Rahaq2_2890 NC_016818.1 3114460 3117222 R PFAM: KWG Leptospira; KWG repeat-containing protein complement(3114460..3117222) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792276 YP_005200860.1 CDS Rahaq2_2891 NC_016818.1 3117738 3117995 D PFAM: Domain of unknown function (DUF1883); hypothetical protein 3117738..3117995 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792277 YP_005200861.1 CDS Rahaq2_2892 NC_016818.1 3118305 3119537 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase 3118305..3119537 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792278 YP_005200862.1 CDS Rahaq2_2893 NC_016818.1 3119534 3120232 R PFAM: Extensin-like protein C-terminus; hypothetical protein complement(3119534..3120232) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792279 YP_005200863.1 CDS Rahaq2_2894 NC_016818.1 3120577 3121590 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent alcohol dehydrogenase complement(3120577..3121590) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792280 YP_005200864.1 CDS Rahaq2_2895 NC_016818.1 3121634 3121843 R hypothetical protein complement(3121634..3121843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792281 YP_005200865.1 CDS Rahaq2_2896 NC_016818.1 3122074 3123729 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 3122074..3123729 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792282 YP_005200866.1 CDS Rahaq2_2897 NC_016818.1 3124109 3126088 D PFAM: Metallo-beta-lactamase superfamily; SCP-2 sterol transfer family; alkyl sulfatase-like hydrolase 3124109..3126088 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794100 YP_005200867.1 CDS Rahaq2_2898 NC_016818.1 3126143 3126931 D hypothetical protein 3126143..3126931 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794101 YP_005200868.1 CDS Rahaq2_2899 NC_016818.1 3127256 3127750 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; manually curated; cation diffusion facilitator family transporter complement(3127256..3127750) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792283 YP_005200869.1 CDS Rahaq2_2900 NC_016818.1 3127818 3128390 R PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(N-terminal)/b6/petB complement(3127818..3128390) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792284 YP_005200870.1 CDS Rahaq2_2901 NC_016818.1 3128905 3129318 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(3128905..3129318) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792285 YP_005200871.1 CDS Rahaq2_2905 NC_016818.1 3130078 3130413 R PFAM: Protein of unknown function (DUF2511); hypothetical protein complement(3130078..3130413) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792288 YP_005200872.1 CDS Rahaq2_2906 NC_016818.1 3130464 3131348 R PFAM: Copper resistance protein D; putative copper export protein complement(3130464..3131348) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792289 YP_005200873.1 CDS Rahaq2_2907 NC_016818.1 3131352 3131735 R PFAM: Copper resistance protein CopC; copper resistance protein CopC-like protein complement(3131352..3131735) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792290 YP_005200874.1 CDS Rahaq2_2908 NC_016818.1 3131877 3132383 R PFAM: Ferritin-like domain; ferritin-like protein complement(3131877..3132383) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792291 YP_005200875.1 CDS Rahaq2_2909 NC_016818.1 3132790 3133020 D PFAM: DNA polymerase III, theta subunit; DNA polymerase III subunit theta 3132790..3133020 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792292 YP_005200876.1 CDS Rahaq2_2910 NC_016818.1 3133040 3133996 R PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; proline iminopeptidase complement(3133040..3133996) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792293 YP_005200877.1 CDS Rahaq2_2911 NC_016818.1 3134275 3134376 D hypothetical protein 3134275..3134376 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792294 YP_005200878.1 CDS Rahaq2_2912 NC_016818.1 3134436 3136502 R PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; protease II complement(3134436..3136502) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792295 YP_005200879.1 CDS Rahaq2_2913 NC_016818.1 3136625 3136990 R hypothetical protein complement(3136625..3136990) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792296 YP_005200880.1 CDS Rahaq2_2914 NC_016818.1 3137152 3138534 R PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; DNA/RNA helicase complement(3137152..3138534) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792297 YP_005200881.1 CDS Rahaq2_2915 NC_016818.1 3138794 3139972 D PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 3138794..3139972 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794103 YP_005200882.1 CDS Rahaq2_2916 NC_016818.1 3140061 3140243 R PFAM: Uncharacterised protein family (UPF0181); hypothetical protein complement(3140061..3140243) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792298 YP_005200883.1 CDS Rahaq2_2917 NC_016818.1 3140404 3141780 D PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; aminodeoxychorismate synthase, component I 3140404..3141780 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792299 YP_005200884.1 CDS Rahaq2_2918 NC_016818.1 3141777 3142379 D PFAM: NUDIX domain; NTP pyrophosphohydrolase 3141777..3142379 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792300 YP_005200885.1 CDS Rahaq2_2919 NC_016818.1 3142585 3143949 D PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; iron-sulfur-dependent L-serine dehydratase 3142585..3143949 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792301 YP_005200886.1 CDS Rahaq2_2920 NC_016818.1 3144405 3145997 D PFAM: EAL domain; EAL domain-containing protein 3144405..3145997 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792302 YP_005200887.1 CDS Rahaq2_2921 NC_016818.1 3146075 3147634 R PFAM: Integral membrane protein TerC family; Transporter associated domain; membrane protein TerC, possibly involved in tellurium resistance complement(3146075..3147634) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792303 YP_005200888.1 CDS Rahaq2_2922 NC_016818.1 3148227 3149189 D PFAM: PTS system fructose IIA component; PTS system sorbose subfamily IIB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component; PTS system, mannose/fructose/sorbose family, IIB component; PTS system mannose/fructose/sorbose family transporter subunit IIB 3148227..3149189 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792304 YP_005200889.1 CDS Rahaq2_2923 NC_016818.1 3149280 3150077 D PFAM: PTS system sorbose-specific iic component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC 3149280..3150077 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792305 YP_005200890.1 CDS Rahaq2_2924 NC_016818.1 3150089 3150931 D PFAM: PTS system mannose/fructose/sorbose family IID component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 3150089..3150931 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792306 YP_005200891.1 CDS Rahaq2_2925 NC_016818.1 3151038 3151496 D PFAM: Protein of unknown function (DUF986); hypothetical protein 3151038..3151496 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794104 YP_005200892.1 CDS Rahaq2_2926 NC_016818.1 3151672 3152280 D PFAM: Domain of unknown function DUF; hypothetical protein 3151672..3152280 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794105 YP_005200893.1 CDS Rahaq2_2927 NC_016818.1 3152272 3153093 R PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis complement(3152272..3153093) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792307 YP_005200894.1 CDS Rahaq2_2928 NC_016818.1 3153240 3153941 D PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein 3153240..3153941 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792308 YP_005200895.1 CDS Rahaq2_2929 NC_016818.1 3154001 3154210 R PFAM: 'Cold-shock' DNA-binding domain; cold shock protein complement(3154001..3154210) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792309 YP_005200896.1 CDS Rahaq2_2930 NC_016818.1 3155482 3156471 R PFAM: Metallo-beta-lactamase superfamily; putative Zn-dependent hydrolase of beta-lactamase fold protein complement(3155482..3156471) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792310 YP_005200897.1 CDS Rahaq2_2931 NC_016818.1 3156660 3156950 D hypothetical protein 3156660..3156950 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792311 YP_005200898.1 CDS Rahaq2_2932 NC_016818.1 3157012 3157248 R hypothetical protein complement(3157012..3157248) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792312 YP_005200899.1 CDS Rahaq2_2933 NC_016818.1 3157384 3157686 R PFAM: Protein of unknown function (DUF2591); hypothetical protein complement(3157384..3157686) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792313 YP_005200900.1 CDS Rahaq2_2934 NC_016818.1 3157840 3158112 R hypothetical protein complement(3157840..3158112) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792314 YP_005200901.1 CDS Rahaq2_2935 NC_016818.1 3159165 3161855 D PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain; outer membrane autotransporter barrel domain-containing protein 3159165..3161855 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792315 YP_005200902.1 CDS Rahaq2_2936 NC_016818.1 3162041 3162277 D hypothetical protein 3162041..3162277 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792316 YP_005200903.1 CDS Rahaq2_2937 NC_016818.1 3162340 3162585 R PFAM: Protein of unknown function (DUF2766); hypothetical protein complement(3162340..3162585) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794106 YP_005200904.1 CDS Rahaq2_2938 NC_016818.1 3162787 3162978 D PFAM: Protein of unknown function (DUF1482); hypothetical protein 3162787..3162978 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794107 YP_005200905.1 CDS Rahaq2_2939 NC_016818.1 3163106 3164746 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 3163106..3164746 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792317 YP_005200906.1 CDS Rahaq2_2940 NC_016818.1 3164888 3165103 D hypothetical protein 3164888..3165103 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792318 YP_005200907.1 CDS Rahaq2_2941 NC_016818.1 3165172 3165459 R hypothetical protein complement(3165172..3165459) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792319 YP_005200908.1 CDS Rahaq2_2942 NC_016818.1 3165732 3165989 D hypothetical protein 3165732..3165989 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792320 YP_005200909.1 CDS Rahaq2_2943 NC_016818.1 3166141 3166632 R hypothetical protein complement(3166141..3166632) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792321 YP_005200910.1 CDS Rahaq2_2944 NC_016818.1 3166950 3168203 R PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type; isocitrate dehydrogenase complement(3166950..3168203) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792322 YP_005200911.1 CDS Rahaq2_2945 NC_016818.1 3168336 3168962 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein 3168336..3168962 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792323 YP_005200912.1 CDS Rahaq2_2946 NC_016818.1 3168955 3169401 D PFAM: NUDIX domain; ADP-ribose pyrophosphatase 3168955..3169401 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792324 YP_005200913.1 CDS Rahaq2_2947 NC_016818.1 3169648 3170757 D PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 3169648..3170757 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792325 YP_005200914.1 CDS Rahaq2_2948 NC_016818.1 3170950 3171576 D PFAM: Protein of unknown function (DUF489); hypothetical protein 3170950..3171576 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792326 YP_005200915.1 CDS Rahaq2_2949 NC_016818.1 3171600 3172970 D PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 3171600..3172970 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792327 YP_005200916.1 CDS Rahaq2_2950 NC_016818.1 3173176 3173850 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 3173176..3173850 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792328 YP_005200917.1 CDS Rahaq2_2951 NC_016818.1 3173877 3175334 D PFAM: PhoQ Sensor; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 3173877..3175334 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792329 YP_005200918.1 CDS Rahaq2_2952 NC_016818.1 3175494 3176615 D PFAM: Cupin superfamily protein; hypothetical protein 3175494..3176615 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792330 YP_005200919.1 CDS Rahaq2_2953 NC_016818.1 3176688 3177923 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T; peptidase T complement(3176688..3177923) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792331 YP_005200920.1 CDS Rahaq2_2954 NC_016818.1 3178070 3178897 R PFAM: Sir2 family; NAD-dependent protein deacetylase, SIR2 family complement(3178070..3178897) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792332 YP_005200921.1 CDS Rahaq2_2955 NC_016818.1 3178948 3180198 R PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family; lipoprotein releasing system, transmembrane protein LolE complement(3178948..3180198) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792333 YP_005200922.1 CDS Rahaq2_2956 NC_016818.1 3180198 3180902 R PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; lipoprotein releasing system, ATP-binding protein complement(3180198..3180902) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792334 YP_005200923.1 CDS Rahaq2_2957 NC_016818.1 3180895 3182175 R PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; lipoprotein releasing system transmembrane protein LolC/E family complement(3180895..3182175) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792335 YP_005200924.1 CDS Rahaq2_2958 NC_016818.1 3182336 3185779 D PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor Mfd 3182336..3185779 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792336 YP_005200925.1 CDS Rahaq2_2959 NC_016818.1 3185806 3186420 D putative MobA-like protein 3185806..3186420 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792337 YP_005200926.1 CDS Rahaq2_2960 NC_016818.1 3186407 3187378 D PFAM: XdhC and CoxI family; xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 3186407..3187378 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792338 YP_005200927.1 CDS Rahaq2_2961 NC_016818.1 3187430 3187966 R PFAM: Rickettsia 17 kDa surface antigen; putative outer membrane lipoprotein complement(3187430..3187966) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792339 YP_005200928.1 CDS Rahaq2_2962 NC_016818.1 3188341 3189645 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase, FAD-containing subunit complement(3188341..3189645) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792340 YP_005200929.1 CDS Rahaq2_2963 NC_016818.1 3189969 3190511 R PFAM: Uncharacterised protein family (UPF0227); putative esterase complement(3189969..3190511) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794108 YP_005200930.1 CDS Rahaq2_2964 NC_016818.1 3190564 3191592 R PFAM: Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase complement(3190564..3191592) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794109 YP_005200931.1 CDS Rahaq2_2965 NC_016818.1 3191640 3192497 R PFAM: Phosphotransferase enzyme family; TIGRFAM: thiamine kinase; putative choline kinase involved in LPS biosynthesis complement(3191640..3192497) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792341 YP_005200932.1 CDS Rahaq2_2966 NC_016818.1 3192481 3193083 R TIGRFAM: uncharacterized proteobacterial lipoprotein; putative lipoprotein complement(3192481..3193083) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792342 YP_005200933.1 CDS Rahaq2_2967 NC_016818.1 3193105 3193473 R PFAM: Protein of unknown function (DUF1425); putative periplasmic lipoprotein complement(3193105..3193473) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792343 YP_005200934.1 CDS Rahaq2_2968 NC_016818.1 3193482 3193835 R PFAM: HIT domain; HIT family hydrolase, diadenosine tetraphosphate hydrolase complement(3193482..3193835) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792344 YP_005200935.1 CDS Rahaq2_2969 NC_016818.1 3194022 3195455 R PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-specific IIBC component; PTS system, maltose and glucose-specific subfamily, IIC component; PTS system glucose-specific transporter subunit IIBC complement(3194022..3195455) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792345 YP_005200936.1 CDS Rahaq2_2970 NC_016818.1 3195793 3196587 R PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase complement(3195793..3196587) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792346 YP_005200937.1 CDS Rahaq2_2971 NC_016818.1 3196626 3197645 R PFAM: DNA polymerase III, delta subunit, C terminal; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunit delta' complement(3196626..3197645) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792347 YP_005200938.1 CDS Rahaq2_2972 NC_016818.1 3197642 3198292 R PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase complement(3197642..3198292) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792348 YP_005200939.1 CDS Rahaq2_2973 NC_016818.1 3198282 3199307 R PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; hypothetical protein complement(3198282..3199307) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792349 YP_005200940.1 CDS Rahaq2_2974 NC_016818.1 3199323 3200120 R PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(3199323..3200120) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792350 YP_005200941.1 CDS Rahaq2_2975 NC_016818.1 3200340 3201581 R PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; beta-ketoacyl-acyl-carrier-protein synthase II complement(3200340..3201581) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794110 YP_005200942.1 CDS Rahaq2_2977 NC_016818.1 3202078 3202812 R PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(3202078..3202812) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792352 YP_005200943.1 CDS Rahaq2_2978 NC_016818.1 3202826 3203755 R PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(3202826..3203755) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794111 YP_005200944.1 CDS Rahaq2_2979 NC_016818.1 3203774 3204727 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; manually curated; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(3203774..3204727) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792353 YP_005200945.1 CDS Rahaq2_2980 NC_016818.1 3204734 3205768 R PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX complement(3204734..3205768) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792354 YP_005200946.1 CDS Rahaq2_2981 NC_016818.1 3205817 3205984 R PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 complement(3205817..3205984) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792355 YP_005200947.1 CDS Rahaq2_2982 NC_016818.1 3205997 3206521 R PFAM: Uncharacterized ACR, COG1399; putative metal-binding protein, possibly nucleic-acid binding protein complement(3205997..3206521) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792356 YP_005200948.1 CDS Rahaq2_2983 NC_016818.1 3206664 3207257 D PFAM: Maf-like protein; TIGRFAM: MAF protein; MAF protein 3206664..3207257 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792357 YP_005200949.1 CDS Rahaq2_2984 NC_016818.1 3207301 3208263 R PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase complement(3207301..3208263) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792358 YP_005200950.1 CDS Rahaq2_2986 NC_016818.1 3208863 3212156 D PFAM: Polyribonucleotide phosphorylase C terminal; Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease, Rne/Rng family 3208863..3212156 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792359 YP_005200951.1 CDS Rahaq2_2987 NC_016818.1 3212229 3212516 R PFAM: Antibiotic biosynthesis monooxygenase; hypothetical protein complement(3212229..3212516) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792360 YP_005200952.1 CDS Rahaq2_2988 NC_016818.1 3212740 3213789 D PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type; dihydroorotase, homodimeric type 3212740..3213789 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792361 YP_005200953.1 CDS Rahaq2_2989 NC_016818.1 3213868 3214122 D PFAM: DinI-like family; DinI-like family 3213868..3214122 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792362 YP_005200954.1 CDS Rahaq2_2990 NC_016818.1 3214469 3214723 D hypothetical protein 3214469..3214723 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792363 YP_005200955.1 CDS Rahaq2_2991 NC_016818.1 3214868 3215983 D PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, monomeric form; glycine/D-amino acid oxidase, deaminating 3214868..3215983 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792364 YP_005200956.1 CDS Rahaq2_2992 NC_016818.1 3216185 3216853 D PFAM: Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 3216185..3216853 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792365 YP_005200957.1 CDS Rahaq2_2993 NC_016818.1 3216973 3218016 R PFAM: Domain of unknown function DUF20; putative permease complement(3216973..3218016) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792366 YP_005200958.1 CDS Rahaq2_2994 NC_016818.1 3218044 3221139 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3218044..3221139) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792367 YP_005200959.1 CDS Rahaq2_2995 NC_016818.1 3221149 3222291 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit complement(3221149..3222291) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794113 YP_005200960.1 CDS Rahaq2_2996 NC_016818.1 3222848 3223393 D PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 3222848..3223393 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792368 YP_005200961.1 CDS Rahaq2_2997 NC_016818.1 3223454 3224032 D PFAM: YceI-like domain; hypothetical protein 3223454..3224032 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792369 YP_005200962.1 CDS Rahaq2_2998 NC_016818.1 3224104 3225159 R PFAM: Rhodanese-like domain; putative sulfurtransferase complement(3224104..3225159) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792370 YP_005200963.1 CDS Rahaq2_2999 NC_016818.1 3225390 3226487 D PFAM: NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase 3225390..3226487 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794114 YP_005200964.1 CDS Rahaq2_3000 NC_016818.1 3226859 3227794 D PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase 3226859..3227794 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794115 YP_005200965.1 CDS Rahaq2_3001 NC_016818.1 3228006 3228440 D PFAM: DoxX; hypothetical protein 3228006..3228440 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792371 YP_005200966.1 CDS Rahaq2_3002 NC_016818.1 3228719 3229957 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 3228719..3229957 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794116 YP_005200967.1 CDS Rahaq2_3003 NC_016818.1 3230021 3230419 R hypothetical protein complement(3230021..3230419) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792372 YP_005200968.1 CDS Rahaq2_3004 NC_016818.1 3230586 3231071 R PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(3230586..3231071) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792373 YP_005200969.1 CDS Rahaq2_3005 NC_016818.1 3231087 3231416 R PFAM: Protein of unknown function (DUF1493); hypothetical protein complement(3231087..3231416) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792374 YP_005200970.1 CDS Rahaq2_3006 NC_016818.1 3231410 3231868 R hypothetical protein complement(3231410..3231868) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792375 YP_005200971.1 CDS Rahaq2_3007 NC_016818.1 3232040 3232276 R hypothetical protein complement(3232040..3232276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792376 YP_005200972.1 CDS Rahaq2_3008 NC_016818.1 3233240 3233647 D hypothetical protein 3233240..3233647 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792377 YP_005200973.1 CDS Rahaq2_3009 NC_016818.1 3233654 3233899 R PFAM: Protein of unknown function (DUF1375); putative periplasmic lipoprotein complement(3233654..3233899) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792378 YP_005200974.1 CDS Rahaq2_3010 NC_016818.1 3234096 3236678 R PFAM: Glycosyl transferase family 2; membrane glycosyltransferase complement(3234096..3236678) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792379 YP_005200975.1 CDS Rahaq2_3011 NC_016818.1 3236671 3238206 R PFAM: Periplasmic glucan biosynthesis protein, MdoG; periplasmic glucans biosynthesis protein complement(3236671..3238206) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792380 YP_005200976.1 CDS Rahaq2_3012 NC_016818.1 3238535 3239719 D PFAM: Acyltransferase family; putative acyltransferase 3238535..3239719 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792381 YP_005200977.1 CDS Rahaq2_3013 NC_016818.1 3239792 3240826 R PFAM: HlyD family secretion protein; multidrug resistance efflux pump complement(3239792..3240826) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792382 YP_005200978.1 CDS Rahaq2_3014 NC_016818.1 3240885 3242486 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; arabinose efflux permease family protein complement(3240885..3242486) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792383 YP_005200979.1 CDS Rahaq2_3015 NC_016818.1 3242733 3243521 D PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; transcriptional regulator 3242733..3243521 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792384 YP_005200980.1 CDS Rahaq2_3016 NC_016818.1 3243542 3243988 D PFAM: Universal stress protein family; universal stress protein UspA-like protein 3243542..3243988 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792385 YP_005200981.1 CDS Rahaq2_3017 NC_016818.1 3244067 3244327 R hypothetical protein complement(3244067..3244327) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792386 YP_005200982.1 CDS Rahaq2_3018 NC_016818.1 3244745 3245110 R PFAM: Protein of unknown function (DUF2502); hypothetical protein complement(3244745..3245110) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792387 YP_005200983.1 CDS Rahaq2_3019 NC_016818.1 3245364 3245495 R hypothetical protein complement(3245364..3245495) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794117 YP_005200984.1 CDS Rahaq2_3020 NC_016818.1 3245675 3245887 D hypothetical protein 3245675..3245887 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792388 YP_005200985.1 CDS Rahaq2_3021 NC_016818.1 3245961 3246221 R hypothetical protein complement(3245961..3246221) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792389 YP_005200986.1 CDS Rahaq2_3022 NC_016818.1 3246273 3246548 R hypothetical protein complement(3246273..3246548) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794118 YP_005200987.1 CDS Rahaq2_3023 NC_016818.1 3246676 3247185 R PFAM: Extracytoplasmic function sigma factor YlaC; Extracytoplasmic function sigma factor YlaC complement(3246676..3247185) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792390 YP_005200988.1 CDS Rahaq2_3024 NC_016818.1 3247363 3247839 D PFAM: Bacterial transcription activator, effector binding domain; DNA gyrase inhibitor 3247363..3247839 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792391 YP_005200989.1 CDS Rahaq2_3025 NC_016818.1 3247845 3248609 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(3247845..3248609) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792392 YP_005200990.1 CDS Rahaq2_3026 NC_016818.1 3248694 3249353 R PFAM: Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase complement(3248694..3249353) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792393 YP_005200991.1 CDS Rahaq2_3027 NC_016818.1 3249577 3249843 D hypothetical protein 3249577..3249843 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792394 YP_005200992.1 CDS Rahaq2_3031 NC_016818.1 3250575 3251123 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(3250575..3251123) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792398 YP_005200993.1 CDS Rahaq2_3032 NC_016818.1 3251180 3253015 R PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC subunit C complement(3251180..3253015) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792399 YP_005200994.1 CDS Rahaq2_3033 NC_016818.1 3253008 3253664 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain complement(3253008..3253664) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792400 YP_005200995.1 CDS Rahaq2_3034 NC_016818.1 3254398 3254622 D PFAM: Protein of unknown function (DUF2594); hypothetical protein 3254398..3254622 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792401 YP_005200996.1 CDS Rahaq2_3035 NC_016818.1 3254731 3254904 D hypothetical protein 3254731..3254904 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792402 YP_005200997.1 CDS Rahaq2_3036 NC_016818.1 3254908 3255666 D PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 3254908..3255666 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792403 YP_005200998.1 CDS Rahaq2_3037 NC_016818.1 3255653 3257323 R PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type; 2-isopropylmalate synthase complement(3255653..3257323) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792404 YP_005200999.1 CDS Rahaq2_3038 NC_016818.1 3257486 3257905 R hypothetical protein complement(3257486..3257905) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792405 YP_005201000.1 CDS Rahaq2_3039 NC_016818.1 3258134 3258382 D hypothetical protein 3258134..3258382 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792406 YP_005201001.1 CDS Rahaq2_3041 NC_016818.1 3259102 3260496 D PFAM: Amino acid permease; gamma-aminobutyrate permease 3259102..3260496 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794119 YP_005201002.1 CDS Rahaq2_3042 NC_016818.1 3260778 3265631 D PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Alpha-L-fucosidase; hypothetical protein 3260778..3265631 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792408 YP_005201003.1 CDS Rahaq2_3043 NC_016818.1 3265742 3266731 R PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); putative membrane-bound metal-dependent hydrolase complement(3265742..3266731) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792409 YP_005201004.1 CDS Rahaq2_3044 NC_016818.1 3266741 3267430 R PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region; transcriptional regulator complement(3266741..3267430) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792410 YP_005201005.1 CDS Rahaq2_3045 NC_016818.1 3267766 3268857 D PFAM: Luciferase-like monooxygenase; TIGRFAM: pyrimidine utilization protein A; pyrimidine utilization protein A 3267766..3268857 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792411 YP_005201006.1 CDS Rahaq2_3046 NC_016818.1 3268857 3269606 D PFAM: Isochorismatase family; TIGRFAM: pyrimidine utilization protein B; pyrimidine utilization protein B 3268857..3269606 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792412 YP_005201007.1 CDS Rahaq2_3047 NC_016818.1 3269633 3270019 D PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; pyrimidine utilization protein C; pyrimidine utilization protein C 3269633..3270019 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792413 YP_005201008.1 CDS Rahaq2_3048 NC_016818.1 3270062 3270862 D PFAM: alpha/beta hydrolase fold; TIGRFAM: pyrimidine utilization protein D; pyrimidine utilization protein D 3270062..3270862 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792414 YP_005201009.1 CDS Rahaq2_3049 NC_016818.1 3270894 3271466 D PFAM: Flavin reductase like domain; TIGRFAM: pyrimidine utilization flavin reductase protein F; pyrimidine utilization flavin reductase protein F 3270894..3271466 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792415 YP_005201010.1 CDS Rahaq2_3050 NC_016818.1 3271498 3272844 D PFAM: Permease family; TIGRFAM: uracil-xanthine permease; pyrimidine utilization transport protein G; pyrimidine utilization transport protein G 3271498..3272844 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792416 YP_005201011.1 CDS Rahaq2_3051 NC_016818.1 3273100 3274740 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: ABC transporter substrate binding protein, KPN_01854 family; ABC transporter substrate binding protein, KPN_01854 family 3273100..3274740 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792417 YP_005201012.1 CDS Rahaq2_3052 NC_016818.1 3274757 3275716 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 3274757..3275716 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792418 YP_005201013.1 CDS Rahaq2_3053 NC_016818.1 3275713 3276576 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 3275713..3276576 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794120 YP_005201014.1 CDS Rahaq2_3054 NC_016818.1 3276573 3278192 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain 3276573..3278192 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792419 YP_005201015.1 CDS Rahaq2_3055 NC_016818.1 3278220 3279281 D PFAM: Luciferase-like monooxygenase; TIGRFAM: putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family; putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family 3278220..3279281 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792420 YP_005201016.1 CDS Rahaq2_3056 NC_016818.1 3279278 3280387 D PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase domain protein, Avi_7169 family; uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; putative peroxidase-related enzyme 3279278..3280387 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794121 YP_005201017.1 CDS Rahaq2_3057 NC_016818.1 3280380 3281225 D hypothetical protein 3280380..3281225 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792421 YP_005201018.1 CDS Rahaq2_3058 NC_016818.1 3281527 3283029 D PFAM: ABC transporter; sugar ABC transporter ATPase 3281527..3283029 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792422 YP_005201019.1 CDS Rahaq2_3059 NC_016818.1 3283026 3284036 D PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease 3283026..3284036 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792423 YP_005201020.1 CDS Rahaq2_3060 NC_016818.1 3284677 3285213 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(3284677..3285213) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792424 YP_005201021.1 CDS Rahaq2_3061 NC_016818.1 3285240 3285809 R PFAM: Helix-turn-helix; putative transcriptional regulator complement(3285240..3285809) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792425 YP_005201022.1 CDS Rahaq2_3062 NC_016818.1 3285989 3286849 D PFAM: MerR family regulatory protein; putative transcriptional regulator 3285989..3286849 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792426 YP_005201023.1 CDS Rahaq2_3063 NC_016818.1 3286842 3287294 D PFAM: Uncharacterized conserved protein (DUF2358); hypothetical protein 3286842..3287294 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792427 YP_005201024.1 CDS Rahaq2_3064 NC_016818.1 3287294 3288010 D PFAM: short chain dehydrogenase; short-chain dehydrogenase 3287294..3288010 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794122 YP_005201025.1 CDS Rahaq2_3065 NC_016818.1 3288012 3289367 D PFAM: Flavin containing amine oxidoreductase; putative NAD/FAD-binding protein 3288012..3289367 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792428 YP_005201026.1 CDS Rahaq2_3066 NC_016818.1 3289364 3290080 D PFAM: Protein of unknown function (DUF1365); hypothetical protein 3289364..3290080 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792429 YP_005201027.1 CDS Rahaq2_3067 NC_016818.1 3290083 3291318 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase, cyclopropane fatty acid synthase 3290083..3291318 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794123 YP_005201028.1 CDS Rahaq2_3068 NC_016818.1 3291315 3291818 D PFAM: Protein of unknown function (DUF2878); hypothetical protein 3291315..3291818 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792430 YP_005201029.1 CDS Rahaq2_3069 NC_016818.1 3291815 3292342 D hypothetical protein 3291815..3292342 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792431 YP_005201030.1 CDS Rahaq2_3070 NC_016818.1 3292363 3292899 D hypothetical protein 3292363..3292899 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792432 YP_005201031.1 CDS Rahaq2_3071 NC_016818.1 3292939 3293856 R PFAM: EamA-like transporter family; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter; putative permease, DMT superfamily complement(3292939..3293856) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792433 YP_005201032.1 CDS Rahaq2_3072 NC_016818.1 3294082 3294258 D hypothetical protein 3294082..3294258 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792434 YP_005201033.1 CDS Rahaq2_3073 NC_016818.1 3294247 3295017 R PFAM: Binding-protein-dependent transport system inner membrane component; proline/glycine betaine ABC transporter permease complement(3294247..3295017) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792435 YP_005201034.1 CDS Rahaq2_3074 NC_016818.1 3295014 3295958 R PFAM: ABC transporter; CBS domain; proline/glycine betaine ABC transporter ATPase complement(3295014..3295958) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792436 YP_005201035.1 CDS Rahaq2_3075 NC_016818.1 3295955 3297124 R PFAM: Binding-protein-dependent transport system inner membrane component; proline/glycine betaine ABC transporter permease complement(3295955..3297124) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792437 YP_005201036.1 CDS Rahaq2_3076 NC_016818.1 3297185 3298123 R PFAM: Substrate binding domain of ABC-type glycine betaine transport system; glycine betaine/choline ABC transporter substrate-binding protein complement(3297185..3298123) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794124 YP_005201037.1 CDS Rahaq2_3077 NC_016818.1 3298361 3299425 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent alcohol dehydrogenase 3298361..3299425 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792438 YP_005201038.1 CDS Rahaq2_3078 NC_016818.1 3299541 3301040 D PFAM: Sugar (and other) transporter; arabinose efflux permease family protein 3299541..3301040 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792439 YP_005201039.1 CDS Rahaq2_3079 NC_016818.1 3301228 3302334 R PFAM: Suppressor of fused protein (SUFU); Suppressor of fused protein (SUFU) complement(3301228..3302334) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794125 YP_005201040.1 CDS Rahaq2_3080 NC_016818.1 3302576 3303442 R PFAM: Uncharacterized protein conserved in bacteria (DUF2236); hypothetical protein complement(3302576..3303442) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792440 YP_005201041.1 CDS Rahaq2_3081 NC_016818.1 3303460 3304119 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(3303460..3304119) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792441 YP_005201042.1 CDS Rahaq2_3082 NC_016818.1 3304330 3304587 D hypothetical protein 3304330..3304587 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792442 YP_005201043.1 CDS Rahaq2_3083 NC_016818.1 3305006 3305263 D PFAM: Protein of unknown function (DUF1471); hypothetical protein 3305006..3305263 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792443 YP_005201044.1 CDS Rahaq2_3084 NC_016818.1 3305433 3305690 D PFAM: Protein of unknown function (DUF1471); hypothetical protein 3305433..3305690 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792444 YP_005201045.1 CDS Rahaq2_3085 NC_016818.1 3305842 3306099 D PFAM: Protein of unknown function (DUF1471); hypothetical protein 3305842..3306099 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792445 YP_005201046.1 CDS Rahaq2_3086 NC_016818.1 3306141 3307559 D hypothetical protein 3306141..3307559 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792446 YP_005201047.1 CDS Rahaq2_3087 NC_016818.1 3307737 3308090 D PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 3307737..3308090 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792447 YP_005201048.1 CDS Rahaq2_3088 NC_016818.1 3308074 3308412 D hypothetical protein 3308074..3308412 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792448 YP_005201049.1 CDS Rahaq2_3089 NC_016818.1 3308479 3309576 R PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase complement(3308479..3309576) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792449 YP_005201050.1 CDS Rahaq2_3090 NC_016818.1 3309650 3309979 R hypothetical protein complement(3309650..3309979) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792450 YP_005201051.1 CDS Rahaq2_3091 NC_016818.1 3310314 3311693 D PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase 3310314..3311693 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792451 YP_005201052.1 CDS Rahaq2_3092 NC_016818.1 3311840 3312961 D PFAM: Cupin superfamily protein; hypothetical protein 3311840..3312961 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792452 YP_005201053.1 CDS Rahaq2_3093 NC_016818.1 3313043 3313966 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE; phosphonate ABC transporter, permease protein PhnE complement(3313043..3313966) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792453 YP_005201054.1 CDS Rahaq2_3094 NC_016818.1 3313966 3314829 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE; phosphonate ABC transporter, permease protein PhnE complement(3313966..3314829) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792454 YP_005201055.1 CDS Rahaq2_3095 NC_016818.1 3314894 3315826 R TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter substrate-binding protein complement(3314894..3315826) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792455 YP_005201056.1 CDS Rahaq2_3096 NC_016818.1 3315898 3316734 R PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein; phosphonate ABC transporter ATPase complement(3315898..3316734) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792456 YP_005201057.1 CDS Rahaq2_3097 NC_016818.1 3316941 3318632 D PFAM: D-lactate dehydrogenase, membrane binding; FAD binding domain; FAD/FMN-dependent dehydrogenase 3316941..3318632 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792457 YP_005201058.1 CDS Rahaq2_3098 NC_016818.1 3318729 3319319 R PFAM: Protein of unknown function (DUF1282); hypothetical protein complement(3318729..3319319) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792458 YP_005201059.1 CDS Rahaq2_3099 NC_016818.1 3319497 3320135 R hypothetical protein complement(3319497..3320135) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792459 YP_005201060.1 CDS Rahaq2_3100 NC_016818.1 3320508 3321137 D hypothetical protein 3320508..3321137 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792460 YP_005201061.1 CDS Rahaq2_3101 NC_016818.1 3321521 3322453 R PFAM: D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase complement(3321521..3322453) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792461 YP_005201062.1 CDS Rahaq2_3102 NC_016818.1 3322687 3323112 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase complement(3322687..3323112) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794126 YP_005201063.1 CDS Rahaq2_3103 NC_016818.1 3323164 3324093 R PFAM: Dihydrouridine synthase (Dus); tRNA-dihydrouridine synthase complement(3323164..3324093) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792462 YP_005201064.1 CDS Rahaq2_3104 NC_016818.1 3324152 3325597 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(3324152..3325597) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792463 YP_005201065.1 CDS Rahaq2_3105 NC_016818.1 3325719 3326366 D putative transcriptional regulator 3325719..3326366 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794127 YP_005201066.1 CDS Rahaq2_3106 NC_016818.1 3326439 3327848 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DNA/RNA helicase complement(3326439..3327848) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792464 YP_005201067.1 CDS Rahaq2_3107 NC_016818.1 3328226 3329428 D PFAM: Sugar (and other) transporter; Major Facilitator Superfamily; arabinose efflux permease family protein 3328226..3329428 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792465 YP_005201068.1 CDS Rahaq2_3108 NC_016818.1 3329677 3330387 R PFAM: Uncharacterised protein family UPF0005; FtsH-interacting integral membrane protein complement(3329677..3330387) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792466 YP_005201069.1 CDS Rahaq2_3109 NC_016818.1 3330505 3330957 R PFAM: MoaE protein; molybdopterin converting factor, large subunit complement(3330505..3330957) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792467 YP_005201070.1 CDS Rahaq2_3110 NC_016818.1 3330959 3331204 R PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; molybdopterin converting factor subunit 1 complement(3330959..3331204) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792468 YP_005201071.1 CDS Rahaq2_3111 NC_016818.1 3331201 3331692 R PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein MoaC complement(3331201..3331692) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794128 YP_005201072.1 CDS Rahaq2_3112 NC_016818.1 3331695 3332207 R PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B complement(3331695..3332207) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792469 YP_005201073.1 CDS Rahaq2_3113 NC_016818.1 3332239 3333225 R PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; molybdenum cofactor biosynthesis protein A complement(3332239..3333225) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792470 YP_005201074.1 CDS Rahaq2_3114 NC_016818.1 3333329 3333502 R hypothetical protein complement(3333329..3333502) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794129 YP_005201075.1 CDS Rahaq2_3115 NC_016818.1 3333637 3334545 D PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related; hypothetical protein 3333637..3334545 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792471 YP_005201076.1 CDS Rahaq2_3116 NC_016818.1 3334610 3335134 R PFAM: Isochorismatase family; nicotinamidase-like amidase complement(3334610..3335134) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792472 YP_005201077.1 CDS Rahaq2_3117 NC_016818.1 3335175 3335543 R PFAM: Uncharacterized conserved protein (DUF2132); hypothetical protein complement(3335175..3335543) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794130 YP_005201078.1 CDS Rahaq2_3118 NC_016818.1 3335609 3337615 R PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B complement(3335609..3337615) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792473 YP_005201079.1 CDS Rahaq2_3119 NC_016818.1 3337608 3337853 R hypothetical protein complement(3337608..3337853) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792474 YP_005201080.1 CDS Rahaq2_3120 NC_016818.1 3338772 3339482 D PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; branched-chain amino acid ABC transporter ATPase 3338772..3339482 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792475 YP_005201081.1 CDS Rahaq2_3121 NC_016818.1 3339487 3340167 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase complement(3339487..3340167) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792476 YP_005201082.1 CDS Rahaq2_3122 NC_016818.1 3340280 3341071 R PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; biotin biosynthesis protein BioC complement(3340280..3341071) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792477 YP_005201083.1 CDS Rahaq2_3123 NC_016818.1 3341055 3342206 R PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(3341055..3342206) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792478 YP_005201084.1 CDS Rahaq2_3124 NC_016818.1 3342210 3343247 R PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; biotin synthetase complement(3342210..3343247) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792479 YP_005201085.1 CDS Rahaq2_3125 NC_016818.1 3343377 3344654 D PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate transaminase 3343377..3344654 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792480 YP_005201086.1 CDS Rahaq2_3126 NC_016818.1 3344655 3345608 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(3344655..3345608) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792481 YP_005201087.1 CDS Rahaq2_3127 NC_016818.1 3345766 3346920 D PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 3345766..3346920 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792482 YP_005201088.1 CDS Rahaq2_3128 NC_016818.1 3346962 3347741 D PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; periplasmic component of amino acid ABC-type transporter/signal transduction system 3346962..3347741 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792483 YP_005201089.1 CDS Rahaq2_3129 NC_016818.1 3348049 3348723 D hypothetical protein 3348049..3348723 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792484 YP_005201090.1 CDS Rahaq2_3130 NC_016818.1 3348739 3350172 D hypothetical protein 3348739..3350172 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792485 YP_005201091.1 CDS Rahaq2_3131 NC_016818.1 3350165 3350560 D hypothetical protein 3350165..3350560 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792486 YP_005201092.1 CDS Rahaq2_3132 NC_016818.1 3350969 3352006 D PFAM: Zinc-binding dehydrogenase; putative NADP-dependent oxidoreductase 3350969..3352006 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792487 YP_005201093.1 CDS Rahaq2_3133 NC_016818.1 3352048 3352743 D PFAM: DJ-1/PfpI family; putative intracellular protease/amidase 3352048..3352743 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792488 YP_005201094.1 CDS Rahaq2_3134 NC_016818.1 3352781 3353263 D PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family; Raf kinase inhibitor-like protein, YbhB/YbcL family 3352781..3353263 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794131 YP_005201095.1 CDS Rahaq2_3135 NC_016818.1 3353385 3354665 D PFAM: Pectinesterase; pectin methylesterase 3353385..3354665 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792489 YP_005201096.1 CDS Rahaq2_3136 NC_016818.1 3354733 3356244 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(3354733..3356244) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792490 YP_005201097.1 CDS Rahaq2_3137 NC_016818.1 3356499 3357497 R PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; 3-carboxymuconate cyclase complement(3356499..3357497) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794132 YP_005201098.1 CDS Rahaq2_3138 NC_016818.1 3357668 3358489 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 3357668..3358489 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792491 YP_005201099.1 CDS Rahaq2_3139 NC_016818.1 3358546 3358815 R putative transcriptional regulator complement(3358546..3358815) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792492 YP_005201100.1 CDS Rahaq2_3140 NC_016818.1 3358961 3359224 D PFAM: Helix-turn-helix; putative transcriptional regulator 3358961..3359224 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792493 YP_005201101.1 CDS Rahaq2_3141 NC_016818.1 3359237 3360298 R PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; molybdenum ABC transporter, ATP-binding protein; molybdenum ABC transporter ATP-binding protein complement(3359237..3360298) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792494 YP_005201102.1 CDS Rahaq2_3142 NC_016818.1 3360300 3360989 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdate ABC transporter permease complement(3360300..3360989) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792495 YP_005201103.1 CDS Rahaq2_3143 NC_016818.1 3361167 3361940 R PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(3361167..3361940) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792496 YP_005201104.1 CDS Rahaq2_3144 NC_016818.1 3362120 3362275 R PFAM: Protein of unknown function (DUF2592); hypothetical protein complement(3362120..3362275) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792497 YP_005201105.1 CDS Rahaq2_3145 NC_016818.1 3362465 3363247 D PFAM: TOBE domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdenum-pterin binding domain; ModE molybdate transport repressor domain/molybdenum-pterin binding domain protein 3362465..3363247 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792498 YP_005201106.1 CDS Rahaq2_3146 NC_016818.1 3363371 3364840 D PFAM: ABC transporter; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 3363371..3364840 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794133 YP_005201107.1 CDS Rahaq2_3147 NC_016818.1 3364794 3365624 R hypothetical protein complement(3364794..3365624) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792499 YP_005201108.1 CDS Rahaq2_3148 NC_016818.1 3365762 3366667 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 3365762..3366667 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792500 YP_005201109.1 CDS Rahaq2_3149 NC_016818.1 3366912 3367928 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-glucose-4-epimerase 3366912..3367928 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794134 YP_005201110.1 CDS Rahaq2_3150 NC_016818.1 3367948 3368997 D PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1; galactose-1-phosphate uridylyltransferase 3367948..3368997 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792501 YP_005201111.1 CDS Rahaq2_3151 NC_016818.1 3368997 3370145 D PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; galactokinase 3368997..3370145 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792502 YP_005201112.1 CDS Rahaq2_3152 NC_016818.1 3370139 3371185 D PFAM: Aldose 1-epimerase; TIGRFAM: galactose mutarotase; galactose mutarotase 3370139..3371185 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792503 YP_005201113.1 CDS Rahaq2_3153 NC_016818.1 3371338 3371670 D PFAM: psiF repeat; psiF repeat protein 3371338..3371670 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792504 YP_005201114.1 CDS Rahaq2_3154 NC_016818.1 3371878 3372630 D PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1; phosphoglycerate mutase, BPG-dependent, family 1 3371878..3372630 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792505 YP_005201115.1 CDS Rahaq2_3155 NC_016818.1 3372707 3373180 D PFAM: Acetyltransferase (GNAT) family; putative P-loop ATPase fused to an acetyltransferase 3372707..3373180 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792506 YP_005201116.1 CDS Rahaq2_3156 NC_016818.1 3373247 3374299 R PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3373247..3374299) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792507 YP_005201117.1 CDS Rahaq2_3157 NC_016818.1 3374501 3374830 D hypothetical protein 3374501..3374830 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794135 YP_005201118.1 CDS Rahaq2_3158 NC_016818.1 3374957 3375910 D PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 3374957..3375910 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792508 YP_005201119.1 CDS Rahaq2_3159 NC_016818.1 3375974 3376699 R PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(3375974..3376699) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792509 YP_005201120.1 CDS Rahaq2_3160 NC_016818.1 3376755 3377819 R PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase complex subunit A complement(3376755..3377819) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792510 YP_005201121.1 CDS Rahaq2_3166 NC_016818.1 3378943 3379722 R TIGRFAM: tol-pal system protein YbgF; tol-pal system protein YbgF complement(3378943..3379722) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792516 YP_005201122.1 CDS Rahaq2_3167 NC_016818.1 3379732 3380244 R PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein complement(3379732..3380244) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792517 YP_005201123.1 CDS Rahaq2_3168 NC_016818.1 3380292 3381584 R PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB; tol-pal system beta propeller repeat protein TolB complement(3380292..3381584) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792518 YP_005201124.1 CDS Rahaq2_3169 NC_016818.1 3381717 3382937 R PFAM: TolA C-terminal; TIGRFAM: TolA protein; TolA protein complement(3381717..3382937) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792519 YP_005201125.1 CDS Rahaq2_3170 NC_016818.1 3383051 3383482 R PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TolR protein complement(3383051..3383482) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792520 YP_005201126.1 CDS Rahaq2_3171 NC_016818.1 3383494 3384183 R PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; TolQ protein complement(3383494..3384183) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792521 YP_005201127.1 CDS Rahaq2_3172 NC_016818.1 3384180 3384584 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(3384180..3384584) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792522 YP_005201128.1 CDS Rahaq2_3173 NC_016818.1 3384734 3385027 R PFAM: Cyd operon protein YbgE (Cyd_oper_YbgE); TIGRFAM: cyd operon protein YbgE; cyd operon protein YbgE complement(3384734..3385027) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792523 YP_005201129.1 CDS Rahaq2_3174 NC_016818.1 3385030 3385143 R PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT; cyd operon protein YbgT complement(3385030..3385143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792524 YP_005201130.1 CDS Rahaq2_3175 NC_016818.1 3385154 3386293 R PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); cytochrome d oxidase cyd subunit II complement(3385154..3386293) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792525 YP_005201131.1 CDS Rahaq2_3176 NC_016818.1 3386308 3387876 R PFAM: Bacterial Cytochrome Ubiquinol Oxidase; cytochrome bd-type quinol oxidase subunit 1 complement(3386308..3387876) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792526 YP_005201132.1 CDS Rahaq2_3177 NC_016818.1 3388598 3389470 R PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(3388598..3389470) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792527 YP_005201133.1 CDS Rahaq2_3178 NC_016818.1 3389470 3390636 R PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta complement(3389470..3390636) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792528 YP_005201134.1 CDS Rahaq2_3179 NC_016818.1 3390737 3391966 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase complement(3390737..3391966) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792529 YP_005201135.1 CDS Rahaq2_3180 NC_016818.1 3392012 3394819 R PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase, E1 component complement(3392012..3394819) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792530 YP_005201136.1 CDS Rahaq2_3181 NC_016818.1 3395220 3395936 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(3395220..3395936) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792531 YP_005201137.1 CDS Rahaq2_3182 NC_016818.1 3395956 3397722 R PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; succinate dehydrogenase, flavoprotein subunit complement(3395956..3397722) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792532 YP_005201138.1 CDS Rahaq2_3183 NC_016818.1 3397726 3398073 R PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein complement(3397726..3398073) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794136 YP_005201139.1 CDS Rahaq2_3184 NC_016818.1 3398067 3398456 R PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase, cytochrome b556 subunit complement(3398067..3398456) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792533 YP_005201140.1 CDS Rahaq2_3185 NC_016818.1 3399327 3400610 D PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); citrate synthase I, hexameric type 3399327..3400610 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792534 YP_005201141.1 CDS Rahaq2_3186 NC_016818.1 3400672 3401466 R PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); formamidopyrimidine-DNA glycosylase complement(3400672..3401466) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794137 YP_005201142.1 CDS Rahaq2_3187 NC_016818.1 3401466 3402116 R PFAM: Pyroglutamyl peptidase; TIGRFAM: pyroglutamyl-peptidase I; pyroglutamyl-peptidase I complement(3401466..3402116) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792535 YP_005201143.1 CDS Rahaq2_3188 NC_016818.1 3402142 3402879 R PFAM: LamB/YcsF family; putative lactam utilization protein B-like protein complement(3402142..3402879) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792536 YP_005201144.1 CDS Rahaq2_3189 NC_016818.1 3402869 3403798 R PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; biotin-dependent carboxylase-like protein complement(3402869..3403798) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792537 YP_005201145.1 CDS Rahaq2_3190 NC_016818.1 3403792 3404457 R PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; hypothetical protein complement(3403792..3404457) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792538 YP_005201146.1 CDS Rahaq2_3191 NC_016818.1 3404683 3406116 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 3404683..3406116 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794138 YP_005201147.1 CDS Rahaq2_3192 NC_016818.1 3406113 3406856 R PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; dinuclear metal center protein complement(3406113..3406856) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792539 YP_005201148.1 CDS Rahaq2_3193 NC_016818.1 3406884 3407867 R PFAM: cAMP phosphodiesterases class-II; low-affinity cAMP phosphodiesterase complement(3406884..3407867) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792540 YP_005201149.1 CDS Rahaq2_3194 NC_016818.1 3407901 3409331 R PFAM: FAD binding domain of DNA photolyase; DNA photolyase; deoxyribodipyrimidine photolyase complement(3407901..3409331) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794139 YP_005201150.1 CDS Rahaq2_3195 NC_016818.1 3409342 3410295 R PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722); hypothetical protein complement(3409342..3410295) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792541 YP_005201151.1 CDS Rahaq2_3196 NC_016818.1 3410477 3410683 R PFAM: Protein of unknown function (DUF2517); hypothetical protein complement(3410477..3410683) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792542 YP_005201152.1 CDS Rahaq2_3197 NC_016818.1 3411183 3412871 D PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA; K+-transporting ATPase, KdpA 3411183..3412871 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794140 YP_005201153.1 CDS Rahaq2_3198 NC_016818.1 3412915 3414981 D PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; K+-transporting ATPase subunit B 3412915..3414981 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794141 YP_005201154.1 CDS Rahaq2_3199 NC_016818.1 3415000 3415593 D PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit; K+-transporting ATPase subunit C 3415000..3415593 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792543 YP_005201155.1 CDS Rahaq2_3200 NC_016818.1 3415620 3418316 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel His kinase sensor domain; osmosensitive K+ channel histidine kinase 3415620..3418316 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792544 YP_005201156.1 CDS Rahaq2_3201 NC_016818.1 3418313 3419002 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 3418313..3419002 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792545 YP_005201157.1 CDS Rahaq2_3202 NC_016818.1 3418992 3419708 R PFAM: Transcriptional regulator PadR-like family; putative transcriptional regulator complement(3418992..3419708) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792546 YP_005201158.1 CDS Rahaq2_3203 NC_016818.1 3419891 3421534 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; phosphoglucomutase, alpha-D-glucose phosphate-specific complement(3419891..3421534) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792547 YP_005201159.1 CDS Rahaq2_3204 NC_016818.1 3421559 3422113 R PFAM: SeqA protein; negative regulator of replication initiationR complement(3421559..3422113) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792548 YP_005201160.1 CDS Rahaq2_3205 NC_016818.1 3422235 3423137 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 3422235..3423137 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792549 YP_005201161.1 CDS Rahaq2_3206 NC_016818.1 3423355 3423681 D PFAM: Ribbon-helix-helix protein, copG family; CopG family transcriptional regulator 3423355..3423681 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792550 YP_005201162.1 CDS Rahaq2_3207 NC_016818.1 3423758 3425422 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(3423758..3425422) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792551 YP_005201163.1 CDS Rahaq2_3208 NC_016818.1 3425843 3426370 D PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin, long chain 3425843..3426370 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792552 YP_005201164.1 CDS Rahaq2_3209 NC_016818.1 3426683 3427138 D PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein 3426683..3427138 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792553 YP_005201165.1 CDS Rahaq2_3210 NC_016818.1 3427278 3427619 R hypothetical protein complement(3427278..3427619) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792554 YP_005201166.1 CDS Rahaq2_3211 NC_016818.1 3427627 3429048 R PFAM: outer membrane porin, OprD family; outer membrane porin, OprD family complement(3427627..3429048) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792555 YP_005201167.1 CDS Rahaq2_3212 NC_016818.1 3429481 3431151 R PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase complement(3429481..3431151) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792556 YP_005201168.1 CDS Rahaq2_3213 NC_016818.1 3431344 3433377 R PFAM: Phosphotransferase system, EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; phosphotransferase system, EIIB; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC component; PTS system, glucose-like IIB component; PTS system, glucose subfamily, IIA component; PTS system N-acetylglucosamine-specific transporter subunit IIBC complement(3431344..3433377) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792557 YP_005201169.1 CDS Rahaq2_3214 NC_016818.1 3433761 3434561 D PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 3433761..3434561 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792558 YP_005201170.1 CDS Rahaq2_3216 NC_016818.1 3434702 3435844 D PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 3434702..3435844 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792560 YP_005201171.1 CDS Rahaq2_3217 NC_016818.1 3435865 3437088 D PFAM: ROK family; MarR family; transcriptional regulator/sugar kinase 3435865..3437088 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792561 YP_005201172.1 CDS Rahaq2_3218 NC_016818.1 3437131 3437898 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; putative HAD superfamily sugar phosphatase 3437131..3437898 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792562 YP_005201173.1 CDS Rahaq2_3219 NC_016818.1 3438259 3439923 D PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 3438259..3439923 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792563 YP_005201174.1 CDS Rahaq2_3226 NC_016818.1 3440946 3442130 R PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(3440946..3442130) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794142 YP_005201175.1 CDS Rahaq2_3227 NC_016818.1 3442265 3443743 D PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 3442265..3443743 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792570 YP_005201176.1 CDS Rahaq2_3228 NC_016818.1 3443767 3443916 R hypothetical protein complement(3443767..3443916) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792571 YP_005201177.1 CDS Rahaq2_3229 NC_016818.1 3444023 3445081 D PFAM: PhoH-like protein; phosphate starvation-inducible protein PhoH 3444023..3445081 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792572 YP_005201178.1 CDS Rahaq2_3230 NC_016818.1 3445078 3445551 D PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metalloprotein 3445078..3445551 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792573 YP_005201179.1 CDS Rahaq2_3231 NC_016818.1 3445651 3446529 D PFAM: CBS domain; Transporter associated domain; putative Mg2+ and Co2+ transporter CorC 3445651..3446529 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794143 YP_005201180.1 CDS Rahaq2_3232 NC_016818.1 3446537 3448066 D PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 3446537..3448066 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792574 YP_005201181.1 CDS Rahaq2_3233 NC_016818.1 3448504 3449400 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 3448504..3449400 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792575 YP_005201182.1 CDS Rahaq2_3234 NC_016818.1 3449589 3450329 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 3449589..3450329 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792576 YP_005201183.1 CDS Rahaq2_3235 NC_016818.1 3450332 3451009 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 3450332..3451009 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792577 YP_005201184.1 CDS Rahaq2_3236 NC_016818.1 3451006 3451731 D PFAM: ABC transporter; polar amino acid ABC transporter ATPase 3451006..3451731 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792578 YP_005201185.1 CDS Rahaq2_3237 NC_016818.1 3451791 3452291 R PFAM: Protein of unknown function (DUF1451); hypothetical protein complement(3451791..3452291) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792579 YP_005201186.1 CDS Rahaq2_3238 NC_016818.1 3452559 3455141 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 3452559..3455141 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794144 YP_005201187.1 CDS Rahaq2_3239 NC_016818.1 3455156 3455776 D PFAM: Rare lipoprotein B family; Rare lipoprotein B 3455156..3455776 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792580 YP_005201188.1 CDS Rahaq2_3240 NC_016818.1 3455773 3456813 D PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 3455773..3456813 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792581 YP_005201189.1 CDS Rahaq2_3241 NC_016818.1 3456828 3457505 D PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate/nicotinamide nucleotide adenylyltransferase 3456828..3457505 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794145 YP_005201190.1 CDS Rahaq2_3242 NC_016818.1 3457712 3458029 D PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap-like ribosome-associated protein 3457712..3458029 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792582 YP_005201191.1 CDS Rahaq2_3243 NC_016818.1 3458033 3458503 D PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; manually curated; rRNA large subunit m3Psi methyltransferase RlmH 3458033..3458503 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794146 YP_005201192.1 CDS Rahaq2_3244 NC_016818.1 3458542 3460446 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 3458542..3460446 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792583 YP_005201193.1 CDS Rahaq2_3245 NC_016818.1 3460453 3461565 D PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; manually curated; rod shape-determining protein RodA 3460453..3461565 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792584 YP_005201194.1 CDS Rahaq2_3246 NC_016818.1 3461575 3462726 D PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; rare lipoprotein A 3461575..3462726 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792585 YP_005201195.1 CDS Rahaq2_3247 NC_016818.1 3462883 3464091 D PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 3462883..3464091 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792586 YP_005201196.1 CDS Rahaq2_3248 NC_016818.1 3464217 3464480 D PFAM: Protein of unknown function (DUF493); hypothetical protein 3464217..3464480 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792587 YP_005201197.1 CDS Rahaq2_3249 NC_016818.1 3464539 3465237 D PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; lipoate-protein ligase B 3464539..3465237 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792588 YP_005201198.1 CDS Rahaq2_3250 NC_016818.1 3465577 3466542 D PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; lipoate synthase 3465577..3466542 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794147 YP_005201199.1 CDS Rahaq2_3251 NC_016818.1 3466642 3466848 R PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase, TatA/E family complement(3466642..3466848) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792589 YP_005201200.1 CDS Rahaq2_3252 NC_016818.1 3467063 3467860 R PFAM: ABC transporter; polar amino acid ABC transporter ATPase complement(3467063..3467860) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792590 YP_005201201.1 CDS Rahaq2_3253 NC_016818.1 3467857 3468840 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease complement(3467857..3468840) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794148 YP_005201202.1 CDS Rahaq2_3254 NC_016818.1 3468837 3469745 R PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system complement(3468837..3469745) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792591 YP_005201203.1 CDS Rahaq2_3255 NC_016818.1 3469925 3470719 R PFAM: Carbon-nitrogen hydrolase; putative amidohydrolase complement(3469925..3470719) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792592 YP_005201204.1 CDS Rahaq2_3256 NC_016818.1 3470765 3471823 R hypothetical protein complement(3470765..3471823) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792593 YP_005201205.1 CDS Rahaq2_3257 NC_016818.1 3471932 3473278 D PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; transcriptional regulator with HTH domain and aminotransferase domain 3471932..3473278 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792594 YP_005201206.1 CDS Rahaq2_3258 NC_016818.1 3473283 3473705 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(3473283..3473705) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792595 YP_005201207.1 CDS Rahaq2_3259 NC_016818.1 3473820 3474203 D PFAM: CrcB-like protein; TIGRFAM: crcB protein; crcB protein 3473820..3474203 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792596 YP_005201208.1 CDS Rahaq2_3260 NC_016818.1 3474359 3474451 D hypothetical protein 3474359..3474451 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792597 YP_005201209.1 CDS Rahaq2_3261 NC_016818.1 3474663 3475319 D PFAM: Bacterial regulatory proteins, tetR family; manually curated; transcriptional regulator 3474663..3475319 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792598 YP_005201210.1 CDS Rahaq2_3262 NC_016818.1 3475437 3475646 R PFAM: 'Cold-shock' DNA-binding domain; cold shock protein complement(3475437..3475646) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794149 YP_005201211.1 CDS Rahaq2_3263 NC_016818.1 3475825 3476571 R PFAM: Uncharacterized protein conserved in bacteria (DUF2076); hypothetical protein complement(3475825..3476571) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792599 YP_005201212.1 CDS Rahaq2_3264 NC_016818.1 3476767 3477897 R PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein complement(3476767..3477897) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792600 YP_005201213.1 CDS Rahaq2_3265 NC_016818.1 3478089 3480209 R PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; serine protease, S9A family peptidase complement(3478089..3480209) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792601 YP_005201214.1 CDS Rahaq2_3266 NC_016818.1 3480512 3480757 D PFAM: Polymyxin resistance protein PmrD; Polymyxin resistance protein PmrD 3480512..3480757 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792602 YP_005201215.1 CDS Rahaq2_3267 NC_016818.1 3480797 3481318 R PFAM: Cupin domain; hypothetical protein complement(3480797..3481318) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792603 YP_005201216.1 CDS Rahaq2_3268 NC_016818.1 3481352 3481705 R hypothetical protein complement(3481352..3481705) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792604 YP_005201217.1 CDS Rahaq2_3269 NC_016818.1 3481732 3482808 R PFAM: GGDEF domain; MASE2 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(3481732..3482808) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792605 YP_005201218.1 CDS Rahaq2_3270 NC_016818.1 3483080 3483487 R PFAM: Cupin domain; hypothetical protein complement(3483080..3483487) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792606 YP_005201219.1 CDS Rahaq2_3271 NC_016818.1 3483659 3484552 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 3483659..3484552 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792607 YP_005201220.1 CDS Rahaq2_3272 NC_016818.1 3484739 3485293 R PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats); acetyltransferase complement(3484739..3485293) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792608 YP_005201221.1 CDS Rahaq2_3273 NC_016818.1 3485342 3486757 R PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; MFS transporter, sugar porter family complement(3485342..3486757) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792609 YP_005201222.1 CDS Rahaq2_3275 NC_016818.1 3487380 3488093 D PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; hypothetical protein 3487380..3488093 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792611 YP_005201223.1 CDS Rahaq2_3276 NC_016818.1 3488347 3488544 R hypothetical protein complement(3488347..3488544) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792612 YP_005201224.1 CDS Rahaq2_3277 NC_016818.1 3489058 3490023 D PFAM: Acyltransferase family; acetyltransferase, fucose-4-O-acetylase 3489058..3490023 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792613 YP_005201225.1 CDS Rahaq2_3281 NC_016818.1 3490673 3491545 D PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase 3490673..3491545 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792616 YP_005201226.1 CDS Rahaq2_3282 NC_016818.1 3491520 3491795 D hypothetical protein 3491520..3491795 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792617 YP_005201227.1 CDS Rahaq2_3283 NC_016818.1 3491894 3492961 R PFAM: Protein of unknown function (DUF1176); hypothetical protein complement(3491894..3492961) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792618 YP_005201228.1 CDS Rahaq2_3284 NC_016818.1 3493217 3494392 D hypothetical protein 3493217..3494392 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792619 YP_005201229.1 CDS Rahaq2_3285 NC_016818.1 3494501 3497536 R PFAM: Autotransporter beta-domain; putative autotransporter protein complement(3494501..3497536) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794151 YP_005201230.1 CDS Rahaq2_3286 NC_016818.1 3498119 3498709 R PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; protein containing C-terminal region of TrgB protein complement(3498119..3498709) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792620 YP_005201231.1 CDS Rahaq2_3287 NC_016818.1 3498783 3499073 R PFAM: Uncharacterized protein conserved in bacteria (DUF2131); hypothetical protein complement(3498783..3499073) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792621 YP_005201232.1 CDS Rahaq2_3288 NC_016818.1 3499430 3502585 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3499430..3502585 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792622 YP_005201233.1 CDS Rahaq2_3289 NC_016818.1 3502676 3502819 D hypothetical protein 3502676..3502819 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792623 YP_005201234.1 CDS Rahaq2_3290 NC_016818.1 3503035 3503418 D PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; Spx/MgsR family transcriptional regulator 3503035..3503418 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794152 YP_005201235.1 CDS Rahaq2_3291 NC_016818.1 3503420 3504547 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade; succinyl-diaminopimelate desuccinylase 3503420..3504547 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792624 YP_005201236.1 CDS Rahaq2_3292 NC_016818.1 3504544 3505218 D PFAM: D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 3504544..3505218 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792625 YP_005201237.1 CDS Rahaq2_3293 NC_016818.1 3505229 3505414 D hypothetical protein 3505229..3505414 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792626 YP_005201238.1 CDS Rahaq2_3294 NC_016818.1 3505545 3506825 D hypothetical protein 3505545..3506825 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792627 YP_005201239.1 CDS Rahaq2_3295 NC_016818.1 3506828 3507928 D PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase 3506828..3507928 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792628 YP_005201240.1 CDS Rahaq2_3296 NC_016818.1 3508006 3508656 R PFAM: Phospholipase/Carboxylesterase; putative esterase complement(3508006..3508656) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792629 YP_005201241.1 CDS Rahaq2_3297 NC_016818.1 3508765 3510750 R PFAM: Putative ATPase (DUF699); Acetyltransferase (GNAT) family; Domain of unknown function (DUF1726); putative P-loop ATPase fused to an acetyltransferase complement(3508765..3510750) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792630 YP_005201242.1 CDS Rahaq2_3298 NC_016818.1 3510752 3511204 R PFAM: Protein of unknown function (DUF441); hypothetical protein complement(3510752..3511204) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792631 YP_005201243.1 CDS Rahaq2_3299 NC_016818.1 3511319 3512194 R PFAM: Putative neutral zinc metallopeptidase; putative metalloprotease complement(3511319..3512194) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792632 YP_005201244.1 CDS Rahaq2_3300 NC_016818.1 3512419 3513132 R PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(3512419..3513132) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792633 YP_005201245.1 CDS Rahaq2_3301 NC_016818.1 3513189 3514268 R PFAM: NlpB/DapX lipoprotein; putative lipoprotein complement(3513189..3514268) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792634 YP_005201246.1 CDS Rahaq2_3302 NC_016818.1 3514285 3515166 R PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(3514285..3515166) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792635 YP_005201247.1 CDS Rahaq2_3303 NC_016818.1 3515495 3516127 D PFAM: Protein of unknown function (DUF3121); TIGRFAM: type VI secretion-associated protein, VC_A0118 family; hypothetical protein 3515495..3516127 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792636 YP_005201248.1 CDS Rahaq2_3304 NC_016818.1 3516193 3516435 R PFAM: Ogr/Delta-like zinc finger; Ogr/Delta-like zinc finger complement(3516193..3516435) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792637 YP_005201249.1 CDS Rahaq2_3305 NC_016818.1 3516482 3517609 R PFAM: Phage late control gene D protein (GPD); phage protein D complement(3516482..3517609) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794153 YP_005201250.1 CDS Rahaq2_3306 NC_016818.1 3517770 3518966 D PFAM: Phage tail sheath protein; phage tail sheath protein FI 3517770..3518966 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792638 YP_005201251.1 CDS Rahaq2_3307 NC_016818.1 3518979 3519494 D PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family; phage contractile tail tube protein, P2 family 3518979..3519494 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792639 YP_005201252.1 CDS Rahaq2_3308 NC_016818.1 3519509 3519847 D PFAM: Phage tail protein E; Phage tail protein E 3519509..3519847 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792640 YP_005201253.1 CDS Rahaq2_3309 NC_016818.1 3519856 3519972 D PFAM: Phage P2 GpE; manually curated; Phage P2 GpE 3519856..3519972 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792641 YP_005201254.1 CDS Rahaq2_3310 NC_016818.1 3519973 3522903 D PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region; phage tail tape measure protein, TP901 family 3519973..3522903 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794154 YP_005201255.1 CDS Rahaq2_3311 NC_016818.1 3522915 3523364 D PFAM: Phage P2 GpU; phage protein U 3522915..3523364 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792642 YP_005201256.1 CDS Rahaq2_3312 NC_016818.1 3523481 3524080 R PFAM: Caudovirales tail fibre assembly protein; tail fiber assembly protein complement(3523481..3524080) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792643 YP_005201257.1 CDS Rahaq2_3313 NC_016818.1 3524080 3525174 R PFAM: Phage Tail Collar Domain; phage-related tail fiber protein complement(3524080..3525174) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792644 YP_005201258.1 CDS Rahaq2_3314 NC_016818.1 3525164 3525781 R PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein, P2 protein I family; phage tail protein, P2 protein I family complement(3525164..3525781) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792645 YP_005201259.1 CDS Rahaq2_3315 NC_016818.1 3525774 3526685 R PFAM: Baseplate J-like protein; phage-related baseplate assembly protein complement(3525774..3526685) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792646 YP_005201260.1 CDS Rahaq2_3316 NC_016818.1 3526682 3527047 R PFAM: Gene 25-like lysozyme; phage baseplate assembly protein W complement(3526682..3527047) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792647 YP_005201261.1 CDS Rahaq2_3317 NC_016818.1 3527044 3527679 R PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V; phage baseplate assembly protein V complement(3527044..3527679) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792648 YP_005201262.1 CDS Rahaq2_3318 NC_016818.1 3527859 3528491 R PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein; phage virion morphogenesis protein, putative tail completion complement(3527859..3528491) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792649 YP_005201263.1 CDS Rahaq2_3319 NC_016818.1 3528492 3528959 R PFAM: P2 phage tail completion protein R (GpR); P2 phage tail completion protein R (GpR) complement(3528492..3528959) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792650 YP_005201264.1 CDS Rahaq2_3320 NC_016818.1 3528962 3529498 R PFAM: Protein of unknown function (DUF2514); hypothetical protein complement(3528962..3529498) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792651 YP_005201265.1 CDS Rahaq2_3321 NC_016818.1 3529495 3529884 R hypothetical protein complement(3529495..3529884) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792652 YP_005201266.1 CDS Rahaq2_3322 NC_016818.1 3529877 3530206 R PFAM: Phage holin family (Lysis protein S); TIGRFAM: phage holin, lambda family; phage holin, lambda family complement(3529877..3530206) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792653 YP_005201267.1 CDS Rahaq2_3323 NC_016818.1 3530216 3530419 R PFAM: Phage Tail Protein X; P2-like prophage tail protein X complement(3530216..3530419) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792654 YP_005201268.1 CDS Rahaq2_3324 NC_016818.1 3530419 3530907 R PFAM: Phage head completion protein (GPL); Phage head completion protein (GPL) complement(3530419..3530907) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792655 YP_005201269.1 CDS Rahaq2_3325 NC_016818.1 3531006 3531836 R PFAM: Phage small terminase subunit; Phage small terminase subunit complement(3531006..3531836) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794155 YP_005201270.1 CDS Rahaq2_3326 NC_016818.1 3531881 3532927 R PFAM: Phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; phage major capsid protein, P2 family complement(3531881..3532927) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792656 YP_005201271.1 CDS Rahaq2_3327 NC_016818.1 3532966 3533805 R PFAM: Phage capsid scaffolding protein (GPO) serine peptidase; Phage capsid scaffolding protein (GPO) serine peptidase complement(3532966..3533805) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792657 YP_005201272.1 CDS Rahaq2_3328 NC_016818.1 3533952 3535667 D PFAM: Terminase-like family; Putative ATPase subunit of terminase (gpP-like); manually curated; hypothetical protein 3533952..3535667 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794156 YP_005201273.1 CDS Rahaq2_3329 NC_016818.1 3535670 3536716 D PFAM: Phage portal protein; TIGRFAM: phage portal protein, PBSX family; phage portal protein, PBSX family 3535670..3536716 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792658 YP_005201274.1 CDS Rahaq2_3330 NC_016818.1 3537121 3537429 R hypothetical protein complement(3537121..3537429) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792659 YP_005201275.1 CDS Rahaq2_3331 NC_016818.1 3537538 3540045 R PFAM: Bacteriophage replication gene A protein (GPA); Bacteriophage replication gene A protein (GPA) complement(3537538..3540045) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792660 YP_005201276.1 CDS Rahaq2_3332 NC_016818.1 3540057 3540971 R PFAM: C-5 cytosine-specific DNA methylase; site-specific DNA methylase complement(3540057..3540971) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792661 YP_005201277.1 CDS Rahaq2_3333 NC_016818.1 3540968 3541903 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); DNA adenine methylase Dam complement(3540968..3541903) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794157 YP_005201278.1 CDS Rahaq2_3334 NC_016818.1 3541900 3542469 R hypothetical protein complement(3541900..3542469) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792662 YP_005201279.1 CDS Rahaq2_3335 NC_016818.1 3542571 3542801 R hypothetical protein complement(3542571..3542801) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792663 YP_005201280.1 CDS Rahaq2_3336 NC_016818.1 3542801 3542995 R hypothetical protein complement(3542801..3542995) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792664 YP_005201281.1 CDS Rahaq2_3337 NC_016818.1 3543043 3543303 R hypothetical protein complement(3543043..3543303) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792665 YP_005201282.1 CDS Rahaq2_3338 NC_016818.1 3543410 3543703 D PFAM: Helix-turn-helix; putative transcriptional regulator 3543410..3543703 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792666 YP_005201283.1 CDS Rahaq2_3339 NC_016818.1 3543768 3544742 D PFAM: Phage integrase family; site-specific recombinase XerD 3543768..3544742 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792667 YP_005201284.1 CDS Rahaq2_3340 NC_016818.1 3544787 3545413 R hypothetical protein complement(3544787..3545413) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792668 YP_005201285.1 CDS Rahaq2_3341 NC_016818.1 3545821 3546387 D glycine cleavage system regulatory protein 3545821..3546387 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792669 YP_005201286.1 CDS Rahaq2_3342 NC_016818.1 3546413 3546880 D PFAM: AhpC/TSA family; peroxiredoxin 3546413..3546880 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792670 YP_005201287.1 CDS Rahaq2_3343 NC_016818.1 3546954 3548018 R PFAM: Domain of unknown function DUF20; putative permease complement(3546954..3548018) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792671 YP_005201288.1 CDS Rahaq2_3344 NC_016818.1 3548273 3549811 D PFAM: Peptidase family M48; putative Zn-dependent protease 3548273..3549811 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792672 YP_005201289.1 CDS Rahaq2_3345 NC_016818.1 3549839 3550195 D PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); glutaredoxin-dependent arsenate reductase 3549839..3550195 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792673 YP_005201290.1 CDS Rahaq2_3346 NC_016818.1 3550245 3550952 R PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda; DnaA regulatory inactivator Hda complement(3550245..3550952) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792674 YP_005201291.1 CDS Rahaq2_3347 NC_016818.1 3551129 3552421 R PFAM: Permease family; TIGRFAM: uracil-xanthine permease; uracil-xanthine permease complement(3551129..3552421) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792675 YP_005201292.1 CDS Rahaq2_3348 NC_016818.1 3552632 3553258 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; uracil phosphoribosyltransferase complement(3552632..3553258) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794158 YP_005201293.1 CDS Rahaq2_3349 NC_016818.1 3553607 3554644 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylaminoimidazole synthetase 3553607..3554644 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792676 YP_005201294.1 CDS Rahaq2_3350 NC_016818.1 3554681 3555319 D PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; phosphoribosylformylglycinamidine synthase, clade II 3554681..3555319 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792677 YP_005201295.1 CDS Rahaq2_3351 NC_016818.1 3555540 3556115 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 3555540..3556115 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792678 YP_005201296.1 CDS Rahaq2_3352 NC_016818.1 3556165 3556272 D hypothetical protein 3556165..3556272 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792679 YP_005201297.1 CDS Rahaq2_3353 NC_016818.1 3556426 3558495 D PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase 1 3556426..3558495 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794159 YP_005201298.1 CDS Rahaq2_3354 NC_016818.1 3558518 3560062 D PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase; exopolyphosphatase 3558518..3560062 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792680 YP_005201299.1 CDS Rahaq2_3355 NC_016818.1 3560141 3562372 R PFAM: EAL domain; MASE1; EAL domain-containing protein complement(3560141..3562372) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792681 YP_005201300.1 CDS Rahaq2_3356 NC_016818.1 3562889 3563107 D PFAM: Protein of unknown function (DUF2633); manually curated; hypothetical protein 3562889..3563107 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792682 YP_005201301.1 CDS Rahaq2_3357 NC_016818.1 3563117 3564556 D PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); Mg2+ transporter MgtE 3563117..3564556 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792683 YP_005201302.1 CDS Rahaq2_3358 NC_016818.1 3564760 3567036 D PFAM: GGDEF domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 3564760..3567036 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792684 YP_005201303.1 CDS Rahaq2_3359 NC_016818.1 3567050 3567922 R PFAM: AlkA N-terminal domain; HhH-GPD superfamily base excision DNA repair protein; 3-methyladenine DNA glycosylase complement(3567050..3567922) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792685 YP_005201304.1 CDS Rahaq2_3360 NC_016818.1 3568096 3569487 R PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase complement(3568096..3569487) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794160 YP_005201305.1 CDS Rahaq2_3361 NC_016818.1 3569715 3570209 D PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase 3569715..3570209 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792686 YP_005201306.1 CDS Rahaq2_3362 NC_016818.1 3570221 3570943 D PFAM: Calcineurin-like phosphoesterase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 3570221..3570943 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792687 YP_005201307.1 CDS Rahaq2_3363 NC_016818.1 3570950 3571567 R PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA complement(3570950..3571567) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794161 YP_005201308.1 CDS Rahaq2_3364 NC_016818.1 3571536 3571700 R hypothetical protein complement(3571536..3571700) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792688 YP_005201309.1 CDS Rahaq2_3365 NC_016818.1 3571748 3572257 D PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 3571748..3572257 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792689 YP_005201310.1 CDS Rahaq2_3366 NC_016818.1 3572254 3573318 D PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; phosphoribosylaminoimidazole carboxylase, PurK protein 3572254..3573318 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792690 YP_005201311.1 CDS Rahaq2_3367 NC_016818.1 3573416 3575848 R PFAM: Predicted permease; putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component complement(3573416..3575848) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792691 YP_005201312.1 CDS Rahaq2_3368 NC_016818.1 3575845 3576531 R PFAM: ABC transporter; putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component complement(3575845..3576531) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792692 YP_005201313.1 CDS Rahaq2_3369 NC_016818.1 3576547 3577131 D PFAM: GDSL-like Lipase/Acylhydrolase; lysophospholipase L1-like esterase 3576547..3577131 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792693 YP_005201314.1 CDS Rahaq2_3370 NC_016818.1 3577253 3578029 D PFAM: short chain dehydrogenase; short-chain dehydrogenase 3577253..3578029 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794162 YP_005201315.1 CDS Rahaq2_3371 NC_016818.1 3578238 3579089 D PFAM: Thioredoxin; thioredoxin domain-containing protein 3578238..3579089 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792694 YP_005201316.1 CDS Rahaq2_3372 NC_016818.1 3579327 3580247 D PFAM: SPFH domain / Band 7 family; membrane protease subunit, stomatin/prohibitin 3579327..3580247 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792695 YP_005201317.1 CDS Rahaq2_3373 NC_016818.1 3580247 3580702 D PFAM: NfeD-like; membrane protease regulatory membrane protein 3580247..3580702 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792696 YP_005201318.1 CDS Rahaq2_3374 NC_016818.1 3580699 3581103 R PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Cu(I)-responsive transcriptional regulator; Cu(I)-responsive transcriptional regulator complement(3580699..3581103) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792697 YP_005201319.1 CDS Rahaq2_3375 NC_016818.1 3581195 3583738 D PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper/silver-translocating P-type ATPase 3581195..3583738 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792698 YP_005201320.1 CDS Rahaq2_3376 NC_016818.1 3583788 3584588 D PFAM: GumN protein; manually curated; hypothetical protein 3583788..3584588 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792699 YP_005201321.1 CDS Rahaq2_3378 NC_016818.1 3584843 3585322 D PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; ybaK/ebsC protein 3584843..3585322 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792701 YP_005201322.1 CDS Rahaq2_3379 NC_016818.1 3585368 3586579 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 3585368..3586579 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792702 YP_005201323.1 CDS Rahaq2_3380 NC_016818.1 3586817 3588508 D PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; transporter, monovalent cation:proton antiporter-2 (CPA2) family 3586817..3588508 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794163 YP_005201324.1 CDS Rahaq2_3381 NC_016818.1 3588570 3588830 R putative transcriptional regulator complement(3588570..3588830) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792703 YP_005201325.1 CDS Rahaq2_3383 NC_016818.1 3589359 3590678 R PFAM: pfkB family carbohydrate kinase; sugar kinase complement(3589359..3590678) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794164 YP_005201326.1 CDS Rahaq2_3384 NC_016818.1 3590717 3591679 R PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; ferrochelatase complement(3590717..3591679) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792705 YP_005201327.1 CDS Rahaq2_3385 NC_016818.1 3591949 3592593 R PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase family protein complement(3591949..3592593) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792706 YP_005201328.1 CDS Rahaq2_3386 NC_016818.1 3592846 3594717 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; molecular chaperone of HSP90 family complement(3592846..3594717) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792707 YP_005201329.1 CDS Rahaq2_3387 NC_016818.1 3594879 3595484 R PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; recombination protein RecR complement(3594879..3595484) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792708 YP_005201330.1 CDS Rahaq2_3388 NC_016818.1 3595484 3595813 R PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; YbaB/EbfC family DNA-binding protein complement(3595484..3595813) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792709 YP_005201331.1 CDS Rahaq2_3389 NC_016818.1 3595855 3597798 R PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III tau subunit V interacting with alpha; DNA polymerase III subunits gamma and tau domain III; DNA polymerase III subunits tau domain IV DnaB-binding; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau complement(3595855..3597798) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792710 YP_005201332.1 CDS Rahaq2_3390 NC_016818.1 3598120 3600183 D PFAM: Alpha amylase, catalytic domain; glycosidase 3598120..3600183 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794165 YP_005201333.1 CDS Rahaq2_3391 NC_016818.1 3600248 3600799 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase complement(3600248..3600799) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792711 YP_005201334.1 CDS Rahaq2_3392 NC_016818.1 3600983 3601351 R PFAM: Protein of unknown function (DUF454); hypothetical protein complement(3600983..3601351) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792712 YP_005201335.1 CDS Rahaq2_3393 NC_016818.1 3601466 3602002 D PFAM: Primosomal replication protein priB and priC; primosomal replication protein N'' 3601466..3602002 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792713 YP_005201336.1 CDS Rahaq2_3394 NC_016818.1 3602086 3602271 D PFAM: Protein of unknown function (DUF2496); hypothetical protein 3602086..3602271 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792714 YP_005201337.1 CDS Rahaq2_3395 NC_016818.1 3602332 3605727 R PFAM: Mechanosensitive ion channel; small-conductance mechanosensitive channel complement(3602332..3605727) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792715 YP_005201338.1 CDS Rahaq2_3396 NC_016818.1 3605897 3606571 R PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family; transcriptional regulator complement(3605897..3606571) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792716 YP_005201339.1 CDS Rahaq2_3397 NC_016818.1 3606677 3607852 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 3606677..3607852 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792717 YP_005201340.1 CDS Rahaq2_3398 NC_016818.1 3607869 3611021 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; manually curated; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3607869..3611021 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792718 YP_005201341.1 CDS Rahaq2_3400 NC_016818.1 3611143 3611397 D PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 3611143..3611397 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792720 YP_005201342.1 CDS Rahaq2_3401 NC_016818.1 3611418 3611558 D PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 3611418..3611558 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792721 YP_005201343.1 CDS Rahaq2_3402 NC_016818.1 3611679 3612557 R PFAM: Periplasmic solute binding protein family; metal ion ABC transporter substrate-binding protein complement(3611679..3612557) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792722 YP_005201344.1 CDS Rahaq2_3403 NC_016818.1 3612601 3613458 R PFAM: ABC 3 transport family; Mn2+/Zn2+ ABC transporter permease complement(3612601..3613458) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794166 YP_005201345.1 CDS Rahaq2_3404 NC_016818.1 3613455 3614183 R PFAM: ABC transporter; Mn/Zn ABC transporter ATPase complement(3613455..3614183) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792723 YP_005201346.1 CDS Rahaq2_3405 NC_016818.1 3614566 3614919 D hypothetical protein 3614566..3614919 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792724 YP_005201347.1 CDS Rahaq2_3406 NC_016818.1 3615151 3615519 D PFAM: Biofilm formation regulator YbaJ; Biofilm formation regulator YbaJ 3615151..3615519 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792725 YP_005201348.1 CDS Rahaq2_3407 NC_016818.1 3615565 3615768 D PFAM: Haemolysin expression modulating protein; hemolysin expression modulating protein 3615565..3615768 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792726 YP_005201349.1 CDS Rahaq2_3408 NC_016818.1 3615844 3616800 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(3615844..3616800) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794167 YP_005201350.1 CDS Rahaq2_3409 NC_016818.1 3616940 3618751 D PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase; adenine deaminase 3616940..3618751 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794168 YP_005201351.1 CDS Rahaq2_3410 NC_016818.1 3618803 3620152 D PFAM: Permease family; permease 3618803..3620152 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792727 YP_005201352.1 CDS Rahaq2_3412 NC_016818.1 3620568 3620876 D PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; O-6-methylguanine DNA methyltransferase 3620568..3620876 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792728 YP_005201353.1 CDS Rahaq2_3413 NC_016818.1 3620947 3621528 R hypothetical protein complement(3620947..3621528) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792729 YP_005201354.1 CDS Rahaq2_3414 NC_016818.1 3621798 3622664 D PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II; acyl-CoA thioesterase II 3621798..3622664 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792730 YP_005201355.1 CDS Rahaq2_3415 NC_016818.1 3622805 3624094 R PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; ammonium transporter complement(3622805..3624094) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792731 YP_005201356.1 CDS Rahaq2_3416 NC_016818.1 3624180 3624518 R PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII complement(3624180..3624518) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792732 YP_005201357.1 CDS Rahaq2_3417 NC_016818.1 3624861 3626660 R PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase/permease complement(3624861..3626660) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792733 YP_005201358.1 CDS Rahaq2_3418 NC_016818.1 3626653 3628425 R PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase/permease complement(3626653..3628425) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792734 YP_005201359.1 CDS Rahaq2_3419 NC_016818.1 3628562 3629017 R PFAM: HTH domain; AsnC family; transcriptional regulator complement(3628562..3629017) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792735 YP_005201360.1 CDS Rahaq2_3420 NC_016818.1 3629138 3630181 D PFAM: Pyridoxal-phosphate dependent enzyme; cysteine synthase 3629138..3630181 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792736 YP_005201361.1 CDS Rahaq2_3421 NC_016818.1 3630354 3631175 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase complement(3630354..3631175) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792737 YP_005201362.1 CDS Rahaq2_3422 NC_016818.1 3631368 3633080 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; ABC transporter substrate-binding protein 3631368..3633080 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792738 YP_005201363.1 CDS Rahaq2_3423 NC_016818.1 3633190 3633888 D PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; queuosine biosynthesis protein QueC 3633190..3633888 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792739 YP_005201364.1 CDS Rahaq2_3424 NC_016818.1 3633993 3634394 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; YbgC/YbaW family acyl-CoA thioester hydrolase complement(3633993..3634394) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792740 YP_005201365.1 CDS Rahaq2_3425 NC_016818.1 3634513 3634896 R TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; competence protein ComEA-like protein complement(3634513..3634896) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792741 YP_005201366.1 CDS Rahaq2_3426 NC_016818.1 3635036 3636916 R PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase complement(3635036..3636916) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792742 YP_005201367.1 CDS Rahaq2_3427 NC_016818.1 3637082 3637357 R PFAM: Bacterial DNA-binding protein; nucleoid DNA-binding protein complement(3637082..3637357) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792743 YP_005201368.1 CDS Rahaq2_3428 NC_016818.1 3637574 3639928 R PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent protease La complement(3637574..3639928) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794170 YP_005201369.1 CDS Rahaq2_3429 NC_016818.1 3640120 3641394 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); endopeptidase Clp ATP-binding regulatory subunit ClpX complement(3640120..3641394) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794171 YP_005201370.1 CDS Rahaq2_3430 NC_016818.1 3641600 3642223 R PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP complement(3641600..3642223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792744 YP_005201371.1 CDS Rahaq2_3431 NC_016818.1 3642640 3643944 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; trigger factor complement(3642640..3643944) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794172 YP_005201372.1 CDS Rahaq2_3432 NC_016818.1 3644377 3644691 R PFAM: BolA-like protein; stress-induced morphogen complement(3644377..3644691) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792745 YP_005201373.1 CDS Rahaq2_3433 NC_016818.1 3645020 3645598 D PFAM: Prokaryotic membrane lipoprotein lipid attachment site; Uncharacterized lipoprotein; putative lipoprotein 3645020..3645598 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792746 YP_005201374.1 CDS Rahaq2_3434 NC_016818.1 3645747 3647225 D PFAM: Major Facilitator Superfamily; TIGRFAM: AmpG-related permease; AmpG-related permease 3645747..3647225 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792747 YP_005201375.1 CDS Rahaq2_3435 NC_016818.1 3647658 3648617 D PFAM: COX Aromatic Rich Motif; Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome o ubiquinol oxidase subunit II; cytochrome aa3 quinol oxidase, subunit II; cytochrome o ubiquinol oxidase subunit II 3647658..3648617 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792748 YP_005201376.1 CDS Rahaq2_3436 NC_016818.1 3648621 3650612 D PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; cytochrome o ubiquinol oxidase subunit I 3648621..3650612 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792749 YP_005201377.1 CDS Rahaq2_3437 NC_016818.1 3650602 3651216 D PFAM: Cytochrome c oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; cytochrome o ubiquinol oxidase subunit III 3650602..3651216 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792750 YP_005201378.1 CDS Rahaq2_3438 NC_016818.1 3651216 3651548 D PFAM: Prokaryotic Cytochrome C oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 3651216..3651548 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794173 YP_005201379.1 CDS Rahaq2_3439 NC_016818.1 3651567 3652451 D PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 3651567..3652451 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792751 YP_005201380.1 CDS Rahaq2_3440 NC_016818.1 3652624 3653988 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 3652624..3653988 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792752 YP_005201381.1 CDS Rahaq2_3441 NC_016818.1 3654159 3655457 D PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 3654159..3655457 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792753 YP_005201382.1 CDS Rahaq2_3442 NC_016818.1 3655515 3656006 R PFAM: Protein of unknown function (DUF520); hypothetical protein complement(3655515..3656006) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792754 YP_005201383.1 CDS Rahaq2_3443 NC_016818.1 3656247 3657158 D PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 3656247..3657158 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792755 YP_005201384.1 CDS Rahaq2_3444 NC_016818.1 3657121 3657729 D PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; DJ-1 family protein 3657121..3657729 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792756 YP_005201385.1 CDS Rahaq2_3445 NC_016818.1 3657856 3658314 R PFAM: Transposase IS200 like; transposase complement(3657856..3658314) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792757 YP_005201386.1 CDS Rahaq2_3447 NC_016818.1 3658510 3659958 R PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; thiazole biosynthesis/tRNA modification protein ThiI complement(3658510..3659958) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794174 YP_005201387.1 CDS Rahaq2_3448 NC_016818.1 3660234 3660476 D PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 3660234..3660476 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792759 YP_005201388.1 CDS Rahaq2_3449 NC_016818.1 3660483 3661412 D PFAM: Polyprenyl synthetase; geranylgeranyl pyrophosphate synthase 3660483..3661412 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792760 YP_005201389.1 CDS Rahaq2_3450 NC_016818.1 3661431 3663293 D PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 3661431..3663293 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794175 YP_005201390.1 CDS Rahaq2_3451 NC_016818.1 3663477 3664451 D PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein 3663477..3664451 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792761 YP_005201391.1 CDS Rahaq2_3452 NC_016818.1 3664522 3665082 R PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A complement(3664522..3665082) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792762 YP_005201392.1 CDS Rahaq2_3453 NC_016818.1 3665079 3666065 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; thiamine-monophosphate kinase complement(3665079..3666065) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792763 YP_005201393.1 CDS Rahaq2_3454 NC_016818.1 3666230 3666643 R PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; transcription antitermination factor NusB complement(3666230..3666643) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792764 YP_005201394.1 CDS Rahaq2_3455 NC_016818.1 3666664 3667134 R PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(3666664..3667134) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792765 YP_005201395.1 CDS Rahaq2_3456 NC_016818.1 3667258 3668406 R PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD complement(3667258..3668406) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792766 YP_005201396.1 CDS Rahaq2_3457 NC_016818.1 3668416 3668865 R PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; transcriptional regulator NrdR complement(3668416..3668865) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794176 YP_005201397.1 CDS Rahaq2_3458 NC_016818.1 3669026 3669586 D PFAM: Protein of unknown function (DUF3251); hypothetical protein 3669026..3669586 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792767 YP_005201398.1 CDS Rahaq2_3459 NC_016818.1 3669660 3670631 R PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family complement(3669660..3670631) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794177 YP_005201399.1 CDS Rahaq2_3460 NC_016818.1 3670642 3672456 R PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein, SecD/SecF family complement(3670642..3672456) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792768 YP_005201400.1 CDS Rahaq2_3461 NC_016818.1 3672517 3672849 R PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC complement(3672517..3672849) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792769 YP_005201401.1 CDS Rahaq2_3462 NC_016818.1 3673012 3674136 R PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase, queuosine-34-forming complement(3673012..3674136) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794178 YP_005201402.1 CDS Rahaq2_3463 NC_016818.1 3674251 3675321 R PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3674251..3675321) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792770 YP_005201403.1 CDS Rahaq2_3464 NC_016818.1 3675456 3676037 D PFAM: Protein of unknown function, DUF479; hypothetical protein 3675456..3676037 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792771 YP_005201404.1 CDS Rahaq2_3465 NC_016818.1 3676262 3676864 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; peroxiredoxin 3676262..3676864 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792772 YP_005201405.1 CDS Rahaq2_3466 NC_016818.1 3677120 3678871 D PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltranspeptidase 3677120..3678871 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792773 YP_005201406.1 CDS Rahaq2_3467 NC_016818.1 3678941 3680371 R PFAM: Amino acid permease; gamma-aminobutyrate permease complement(3678941..3680371) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792774 YP_005201407.1 CDS Rahaq2_3468 NC_016818.1 3680529 3681848 R PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier; branched-chain amino acid uptake carrier complement(3680529..3681848) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792775 YP_005201408.1 CDS Rahaq2_3469 NC_016818.1 3682292 3683395 R PFAM: Cobalamin-independent synthase, Catalytic domain; methionine synthase II (cobalamin-independent) complement(3682292..3683395) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792776 YP_005201409.1 CDS Rahaq2_3470 NC_016818.1 3683669 3684064 D PFAM: Protein of unknown function (DUF1044); hypothetical protein 3683669..3684064 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792777 YP_005201410.1 CDS Rahaq2_3471 NC_016818.1 3684057 3684389 D PFAM: Helix-turn-helix; putative transcriptional regulator 3684057..3684389 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792778 YP_005201411.1 CDS Rahaq2_3472 NC_016818.1 3684423 3685742 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); PAS fold; TIGRFAM: PAS domain S-box; phosphate regulon sensor kinase PhoR; phosphate regulon sensor kinase PhoR complement(3684423..3685742) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792779 YP_005201412.1 CDS Rahaq2_3473 NC_016818.1 3685765 3686454 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; phosphate regulon transcriptional regulatory protein PhoB complement(3685765..3686454) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792780 YP_005201413.1 CDS Rahaq2_3474 NC_016818.1 3686507 3687931 D PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD; exonuclease SbcD 3686507..3687931 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794179 YP_005201414.1 CDS Rahaq2_3475 NC_016818.1 3687928 3691176 D TIGRFAM: exonuclease SbcC; exonuclease SbcC 3687928..3691176 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792781 YP_005201415.1 CDS Rahaq2_3476 NC_016818.1 3691416 3692438 D PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 3691416..3692438 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792782 YP_005201416.1 CDS Rahaq2_3477 NC_016818.1 3692450 3693214 D PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 3692450..3693214 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792783 YP_005201417.1 CDS Rahaq2_3478 NC_016818.1 3693211 3694032 D PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase 3693211..3694032 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792784 YP_005201418.1 CDS Rahaq2_3479 NC_016818.1 3694087 3695007 R PFAM: ROK family; transcriptional regulator/sugar kinase complement(3694087..3695007) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792785 YP_005201419.1 CDS Rahaq2_3480 NC_016818.1 3695217 3696131 D PFAM: Putative exonuclease, RdgC; DNA recombination-dependent growth factor C 3695217..3696131 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792786 YP_005201420.1 CDS Rahaq2_3481 NC_016818.1 3696201 3696491 R PFAM: Protein of unknown function (DUF1255); hypothetical protein complement(3696201..3696491) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792787 YP_005201421.1 CDS Rahaq2_3482 NC_016818.1 3696673 3697350 R PFAM: AroM protein; AroM protein complement(3696673..3697350) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792788 YP_005201422.1 CDS Rahaq2_3483 NC_016818.1 3697355 3698284 R PFAM: Protein of unknown function (DUF1177); hypothetical protein complement(3697355..3698284) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792789 YP_005201423.1 CDS Rahaq2_3484 NC_016818.1 3698420 3699997 R PFAM: OPT oligopeptide transporter protein; hypothetical protein complement(3698420..3699997) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792790 YP_005201424.1 CDS Rahaq2_3485 NC_016818.1 3700071 3700853 R PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; transcriptional regulator complement(3700071..3700853) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792791 YP_005201425.1 CDS Rahaq2_3486 NC_016818.1 3701074 3701190 R hypothetical protein complement(3701074..3701190) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792792 YP_005201426.1 CDS Rahaq2_3487 NC_016818.1 3701400 3701924 R PFAM: Shikimate kinase; shikimate kinase complement(3701400..3701924) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792793 YP_005201427.1 CDS Rahaq2_3488 NC_016818.1 3702200 3702778 R PFAM: Ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase complement(3702200..3702778) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792794 YP_005201428.1 CDS Rahaq2_3489 NC_016818.1 3702943 3703074 D hypothetical protein 3702943..3703074 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792795 YP_005201429.1 CDS Rahaq2_3490 NC_016818.1 3703036 3703311 R PFAM: Protein of unknown function (DUF1471); hypothetical protein complement(3703036..3703311) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792796 YP_005201430.1 CDS Rahaq2_3491 NC_016818.1 3703700 3704620 D PFAM: Protein of unknown function (DUF808); hypothetical protein 3703700..3704620 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792797 YP_005201431.1 CDS Rahaq2_3492 NC_016818.1 3704677 3705447 R PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis complement(3704677..3705447) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792798 YP_005201432.1 CDS Rahaq2_3493 NC_016818.1 3705586 3706377 D hypothetical protein 3705586..3706377 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792799 YP_005201433.1 CDS Rahaq2_3494 NC_016818.1 3706515 3707063 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 3706515..3707063 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792800 YP_005201434.1 CDS Rahaq2_3495 NC_016818.1 3707098 3707943 D PFAM: Rhodanese-like domain; rhodanese-related sulfurtransferase 3707098..3707943 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792801 YP_005201435.1 CDS Rahaq2_3496 NC_016818.1 3707990 3708793 R hypothetical protein complement(3707990..3708793) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792802 YP_005201436.1 CDS Rahaq2_3497 NC_016818.1 3708809 3709816 R PFAM: Fatty acid desaturase; fatty acid desaturase complement(3708809..3709816) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792803 YP_005201437.1 CDS Rahaq2_3498 NC_016818.1 3709918 3711219 R PFAM: Histidine acid phosphatase; Histidine acid phosphatase complement(3709918..3711219) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792804 YP_005201438.1 CDS Rahaq2_3499 NC_016818.1 3711392 3712003 R PFAM: Antimicrobial peptide resistance and lipid A acylation protein PagP; Antimicrobial peptide resistance and lipid A acylation protein PagP complement(3711392..3712003) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792805 YP_005201439.1 CDS Rahaq2_3500 NC_016818.1 3712259 3716149 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; phosphoribosylformylglycinamidine synthase, single chain form complement(3712259..3716149) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792806 YP_005201440.1 CDS Rahaq2_3501 NC_016818.1 3716428 3717888 D PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; manually curated; putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 3716428..3717888 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792807 YP_005201441.1 CDS Rahaq2_3502 NC_016818.1 3717907 3718449 R PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytosine/adenosine deaminase complement(3717907..3718449) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792808 YP_005201442.1 CDS Rahaq2_3503 NC_016818.1 3718506 3719144 R TIGRFAM: haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB; haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB complement(3718506..3719144) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794180 YP_005201443.1 CDS Rahaq2_3504 NC_016818.1 3719149 3720531 R PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component complement(3719149..3720531) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792809 YP_005201444.1 CDS Rahaq2_3505 NC_016818.1 3720548 3721453 R PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; N-acetylmuramic acid 6-phosphate etherase complement(3720548..3721453) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792810 YP_005201445.1 CDS Rahaq2_3506 NC_016818.1 3721596 3722444 D PFAM: SIS domain; Helix-turn-helix domain, rpiR family; transcriptional regulator 3721596..3722444 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792811 YP_005201446.1 CDS Rahaq2_3507 NC_016818.1 3722546 3722800 D hypothetical protein 3722546..3722800 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792812 YP_005201447.1 CDS Rahaq2_3508 NC_016818.1 3722822 3723202 R PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; holo-(acyl-carrier-protein) synthase complement(3722822..3723202) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792813 YP_005201448.1 CDS Rahaq2_3509 NC_016818.1 3723202 3723933 R PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5''-phosphate synthase complement(3723202..3723933) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792814 YP_005201449.1 CDS Rahaq2_3510 NC_016818.1 3724038 3724775 R PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA repair protein RecO complement(3724038..3724775) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792815 YP_005201450.1 CDS Rahaq2_3511 NC_016818.1 3724787 3725692 R PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era complement(3724787..3725692) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792816 YP_005201451.1 CDS Rahaq2_3512 NC_016818.1 3725689 3726369 R PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial; manually curated; ribonuclease III complement(3725689..3726369) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792817 YP_005201452.1 CDS Rahaq2_3513 NC_016818.1 3726580 3727557 R PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I complement(3726580..3727557) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792818 YP_005201453.1 CDS Rahaq2_3514 NC_016818.1 3727586 3729499 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein LepA complement(3727586..3729499) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792819 YP_005201454.1 CDS Rahaq2_3515 NC_016818.1 3729810 3730628 D hypothetical protein 3729810..3730628 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794181 YP_005201455.1 CDS Rahaq2_3516 NC_016818.1 3730682 3731158 R PFAM: Positive regulator of sigma(E), RseC/MucC; Positive regulator of sigma E activity complement(3730682..3731158) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794182 YP_005201456.1 CDS Rahaq2_3517 NC_016818.1 3731208 3732158 R PFAM: MucB/RseB family; negative regulator of sigma E activity complement(3731208..3732158) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792820 YP_005201457.1 CDS Rahaq2_3518 NC_016818.1 3732158 3732805 R PFAM: Anti sigma-E protein RseA, C-terminal domain; Anti sigma-E protein RseA, N-terminal domain; negative regulator of sigma E activity complement(3732158..3732805) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792821 YP_005201458.1 CDS Rahaq2_3519 NC_016818.1 3732836 3733525 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE; RNA polymerase sigma factor RpoE complement(3732836..3733525) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794183 YP_005201459.1 CDS Rahaq2_3520 NC_016818.1 3733590 3735227 D PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase 3733590..3735227 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792822 YP_005201460.1 CDS Rahaq2_3521 NC_016818.1 3735309 3736055 R PFAM: Methyltransferase small domain; manually curated; putative O-methyltransferase complement(3735309..3736055) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792823 YP_005201461.1 CDS Rahaq2_3522 NC_016818.1 3736213 3737541 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DNA/RNA helicase 3736213..3737541 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794184 YP_005201462.1 CDS Rahaq2_3523 NC_016818.1 3737631 3738014 R PFAM: Glycine radical; acid-induced glycyl radical enzyme complement(3737631..3738014) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794185 YP_005201463.1 CDS Rahaq2_3524 NC_016818.1 3738353 3739033 D PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase 3738353..3739033 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792824 YP_005201464.1 CDS Rahaq2_3525 NC_016818.1 3739095 3739682 R PFAM: GrpE; molecular chaperone GrpE complement(3739095..3739682) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792825 YP_005201465.1 CDS Rahaq2_3526 NC_016818.1 3739820 3740698 D PFAM: ATP-NAD kinase; putative sugar kinase 3739820..3740698 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792826 YP_005201466.1 CDS Rahaq2_3527 NC_016818.1 3740795 3742456 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN 3740795..3742456 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792827 YP_005201467.1 CDS Rahaq2_3528 NC_016818.1 3742563 3742913 D PFAM: SmpA / OmlA family; small protein A (tmRNA-binding) 3742563..3742913 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792828 YP_005201468.1 CDS Rahaq2_3529 NC_016818.1 3742991 3743275 R PFAM: Uncharacterised protein family (UPF0125); hypothetical protein complement(3742991..3743275) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792829 YP_005201469.1 CDS Rahaq2_3530 NC_016818.1 3743268 3743702 R PFAM: Polyketide cyclase / dehydrase and lipid transport; oligoketide cyclase/lipid transport protein complement(3743268..3743702) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792830 YP_005201470.1 CDS Rahaq2_3531 NC_016818.1 3743859 3744341 D PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 3743859..3744341 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792831 YP_005201471.1 CDS Rahaq2_3533 NC_016818.1 3744904 3745098 D hypothetical protein 3744904..3745098 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792833 YP_005201472.1 CDS Rahaq2_3535 NC_016818.1 3745548 3747179 R PFAM: Restriction endonuclease; restriction endonuclease complement(3745548..3747179) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792835 YP_005201473.1 CDS Rahaq2_3536 NC_016818.1 3747776 3748123 R hypothetical protein complement(3747776..3748123) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792836 YP_005201474.1 CDS Rahaq2_3537 NC_016818.1 3748587 3749369 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(3748587..3749369) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792837 YP_005201475.1 CDS Rahaq2_3538 NC_016818.1 3749649 3750944 D PFAM: Tagatose 6 phosphate kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; D-tagatose-bisphosphate aldolase non-catalytic subunit 3749649..3750944 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794186 YP_005201476.1 CDS Rahaq2_3539 NC_016818.1 3750937 3751419 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) 3750937..3751419 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794187 YP_005201477.1 CDS Rahaq2_3540 NC_016818.1 3751495 3751779 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; PTS system galactitol-specific transporter subunit IIB 3751495..3751779 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792838 YP_005201478.1 CDS Rahaq2_3541 NC_016818.1 3751783 3753150 D PFAM: PTS system sugar-specific permease component; TIGRFAM: PTS system, galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 3751783..3753150 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792839 YP_005201479.1 CDS Rahaq2_3542 NC_016818.1 3753194 3754243 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; theronine dehydrogenase-like Zn-dependent dehydrogenase 3753194..3754243 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792840 YP_005201480.1 CDS Rahaq2_3543 NC_016818.1 3754248 3755102 D PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; class II aldolase, tagatose bisphosphate family; tagatose bisphosphate family class II aldolase 3754248..3755102 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792841 YP_005201481.1 CDS Rahaq2_3544 NC_016818.1 3755225 3755929 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 3755225..3755929 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792842 YP_005201482.1 CDS Rahaq2_3545 NC_016818.1 3755979 3756512 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(3755979..3756512) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792843 YP_005201483.1 CDS Rahaq2_3546 NC_016818.1 3756566 3757663 R PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase; O-6-methylguanine DNA methyltransferase complement(3756566..3757663) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792844 YP_005201484.1 CDS Rahaq2_3547 NC_016818.1 3757760 3758281 R PFAM: Acetyltransferase (GNAT) family; sortase complement(3757760..3758281) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792845 YP_005201485.1 CDS Rahaq2_3548 NC_016818.1 3758368 3758922 D PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator 3758368..3758922 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792846 YP_005201486.1 CDS Rahaq2_3549 NC_016818.1 3758906 3760591 R PFAM: Peptidase family M28; putative aminopeptidase complement(3758906..3760591) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792847 YP_005201487.1 CDS Rahaq2_3550 NC_016818.1 3760594 3761388 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; periplasmic component of amino acid ABC-type transporter/signal transduction system complement(3760594..3761388) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792848 YP_005201488.1 CDS Rahaq2_3551 NC_016818.1 3761431 3762633 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase complement(3761431..3762633) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792849 YP_005201489.1 CDS Rahaq2_3552 NC_016818.1 3762829 3763698 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 3762829..3763698 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792850 YP_005201490.1 CDS Rahaq2_3553 NC_016818.1 3763699 3764580 R PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family; phenazine biosynthesis protein PhzF family protein complement(3763699..3764580) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792851 YP_005201491.1 CDS Rahaq2_3554 NC_016818.1 3764736 3766025 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; lysine/ornithine N-monooxygenase 3764736..3766025 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792852 YP_005201492.1 CDS Rahaq2_3555 NC_016818.1 3766097 3766747 R PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; hemolysin III family channel protein complement(3766097..3766747) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792853 YP_005201493.1 CDS Rahaq2_3556 NC_016818.1 3767122 3767730 D putative HD superfamily hydrolase 3767122..3767730 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792854 YP_005201494.1 CDS Rahaq2_3557 NC_016818.1 3767771 3769078 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(3767771..3769078) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792855 YP_005201495.1 CDS Rahaq2_3558 NC_016818.1 3769071 3770180 R PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATPase complement(3769071..3770180) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794188 YP_005201496.1 CDS Rahaq2_3559 NC_016818.1 3770177 3771004 R PFAM: Calcineurin-like phosphoesterase; putative phosphohydrolase complement(3770177..3771004) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794189 YP_005201497.1 CDS Rahaq2_3560 NC_016818.1 3771016 3771915 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(3771016..3771915) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792856 YP_005201498.1 CDS Rahaq2_3561 NC_016818.1 3771905 3772777 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(3771905..3772777) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792857 YP_005201499.1 CDS Rahaq2_3562 NC_016818.1 3772939 3773340 R hypothetical protein complement(3772939..3773340) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792858 YP_005201500.1 CDS Rahaq2_3563 NC_016818.1 3773318 3773734 R hypothetical protein complement(3773318..3773734) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792859 YP_005201501.1 CDS Rahaq2_3564 NC_016818.1 3773738 3774223 R PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(3773738..3774223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792860 YP_005201502.1 CDS Rahaq2_3565 NC_016818.1 3774660 3775592 R PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; ribokinase complement(3774660..3775592) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792861 YP_005201503.1 CDS Rahaq2_3566 NC_016818.1 3775589 3776533 R PFAM: ROK family; transcriptional regulator/sugar kinase complement(3775589..3776533) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792862 YP_005201504.1 CDS Rahaq2_3567 NC_016818.1 3776549 3777229 R PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Pentose-5-phosphate-3-epimerase complement(3776549..3777229) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792863 YP_005201505.1 CDS Rahaq2_3568 NC_016818.1 3777268 3778353 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(3777268..3778353) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792864 YP_005201506.1 CDS Rahaq2_3569 NC_016818.1 3778365 3779354 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(3778365..3779354) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792865 YP_005201507.1 CDS Rahaq2_3570 NC_016818.1 3779347 3780879 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(3779347..3780879) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792866 YP_005201508.1 CDS Rahaq2_3571 NC_016818.1 3780882 3781868 R sugar ABC transporter periplasmic protein complement(3780882..3781868) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792867 YP_005201509.1 CDS Rahaq2_3572 NC_016818.1 3781887 3782744 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(3781887..3782744) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792868 YP_005201510.1 CDS Rahaq2_3573 NC_016818.1 3783075 3783818 R PFAM: short chain dehydrogenase; dehydrogenase complement(3783075..3783818) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792869 YP_005201511.1 CDS Rahaq2_3574 NC_016818.1 3783908 3784846 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(3783908..3784846) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792870 YP_005201512.1 CDS Rahaq2_3575 NC_016818.1 3785223 3788096 R PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); glycine dehydrogenase, decarboxylating complement(3785223..3788096) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792871 YP_005201513.1 CDS Rahaq2_3576 NC_016818.1 3788206 3788592 R PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; glycine cleavage system H protein complement(3788206..3788592) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792872 YP_005201514.1 CDS Rahaq2_3577 NC_016818.1 3788647 3789744 R PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: glycine cleavage system T protein; glycine cleavage system T protein complement(3788647..3789744) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794190 YP_005201515.1 CDS Rahaq2_3578 NC_016818.1 3790055 3791281 R PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(3790055..3791281) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792873 YP_005201516.1 CDS Rahaq2_3579 NC_016818.1 3791299 3792477 R PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; manually curated; 2-polyprenyl-6-methoxyphenol 4-hydroxylase complement(3791299..3792477) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792874 YP_005201517.1 CDS Rahaq2_3580 NC_016818.1 3792479 3793795 R PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; Xaa-Pro aminopeptidase complement(3792479..3793795) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792875 YP_005201518.1 CDS Rahaq2_3581 NC_016818.1 3793856 3794434 R PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein; yecA family protein complement(3793856..3794434) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792876 YP_005201519.1 CDS Rahaq2_3582 NC_016818.1 3794682 3795011 D PFAM: Cell division protein ZapA; hypothetical protein 3794682..3795011 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792877 YP_005201520.1 CDS Rahaq2_3584 NC_016818.1 3795282 3795878 D PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5,10-methenyltetrahydrofolate synthetase 3795282..3795878 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792879 YP_005201521.1 CDS Rahaq2_3585 NC_016818.1 3796152 3796565 D hypothetical protein 3796152..3796565 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792880 YP_005201522.1 CDS Rahaq2_3586 NC_016818.1 3796876 3798114 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; phosphoglycerate dehydrogenase-like oxidoreductase complement(3796876..3798114) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792881 YP_005201523.1 CDS Rahaq2_3587 NC_016818.1 3798464 3799126 R PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase complement(3798464..3799126) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792882 YP_005201524.1 CDS Rahaq2_3588 NC_016818.1 3799353 3800255 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family; ArgP family transcriptional regulator 3799353..3800255 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792883 YP_005201525.1 CDS Rahaq2_3589 NC_016818.1 3800284 3801069 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; manually curated; transcriptional regulator complement(3800284..3801069) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792884 YP_005201526.1 CDS Rahaq2_3590 NC_016818.1 3801191 3802021 D PFAM: short chain dehydrogenase; short-chain dehydrogenase 3801191..3802021 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792885 YP_005201527.1 CDS Rahaq2_3591 NC_016818.1 3802087 3804876 R PFAM: Peptidase M66; Peptidase M66 complement(3802087..3804876) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792886 YP_005201528.1 CDS Rahaq2_3592 NC_016818.1 3805112 3805846 R PFAM: Protein of unknown function (DUF541); hypothetical protein complement(3805112..3805846) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792887 YP_005201529.1 CDS Rahaq2_3593 NC_016818.1 3805950 3806567 R PFAM: LysE type translocator; TIGRFAM: L-lysine exporter; L-lysine exporter complement(3805950..3806567) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792888 YP_005201530.1 CDS Rahaq2_3594 NC_016818.1 3806751 3807638 R PFAM: Mechanosensitive ion channel; Conserved TM helix; small-conductance mechanosensitive channel complement(3806751..3807638) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794191 YP_005201531.1 CDS Rahaq2_3595 NC_016818.1 3807775 3809043 R PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter; oligosaccharide:H+ symporter complement(3807775..3809043) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794192 YP_005201532.1 CDS Rahaq2_3596 NC_016818.1 3809104 3812202 R PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain; beta-galactosidase/beta-glucuronidase complement(3809104..3812202) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792889 YP_005201533.1 CDS Rahaq2_3597 NC_016818.1 3812337 3813419 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(3812337..3813419) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794193 YP_005201534.1 CDS Rahaq2_3598 NC_016818.1 3813555 3814634 R PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; fructose-bisphosphate aldolase complement(3813555..3814634) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792890 YP_005201535.1 CDS Rahaq2_3599 NC_016818.1 3814761 3815927 R PFAM: Phosphoglycerate kinase; 3-phosphoglycerate kinase complement(3814761..3815927) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794194 YP_005201536.1 CDS Rahaq2_3600 NC_016818.1 3816000 3817016 R PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I; erythrose-4-phosphate dehydrogenase complement(3816000..3817016) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792891 YP_005201537.1 CDS Rahaq2_3601 NC_016818.1 3817515 3819509 R PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase complement(3817515..3819509) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792892 YP_005201538.1 CDS Rahaq2_3602 NC_016818.1 3819758 3820510 D PFAM: Peptidase family M48; Zn-dependent protease with chaperone function 3819758..3820510 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792893 YP_005201539.1 CDS Rahaq2_3603 NC_016818.1 3821066 3821653 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 3821066..3821653 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792894 YP_005201540.1 CDS Rahaq2_3604 NC_016818.1 3821738 3822472 D PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD 3821738..3822472 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792895 YP_005201541.1 CDS Rahaq2_3605 NC_016818.1 3822432 3825140 D PFAM: Fimbrial Usher protein; P pilus assembly protein, porin PapC 3822432..3825140 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792896 YP_005201542.1 CDS Rahaq2_3606 NC_016818.1 3825171 3825749 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 3825171..3825749 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792897 YP_005201543.1 CDS Rahaq2_3607 NC_016818.1 3825788 3826354 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 3825788..3826354 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792898 YP_005201544.1 CDS Rahaq2_3608 NC_016818.1 3826384 3826986 D PFAM: Fimbrial protein; manually curated; P pilus assembly protein, pilin FimA 3826384..3826986 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792899 YP_005201545.1 CDS Rahaq2_3609 NC_016818.1 3826979 3828088 D PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA 3826979..3828088 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792900 YP_005201546.1 CDS Rahaq2_3610 NC_016818.1 3828157 3830139 R PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic; arginine decarboxylase complement(3828157..3830139) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792901 YP_005201547.1 CDS Rahaq2_3611 NC_016818.1 3831020 3832171 D PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 3831020..3832171 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794195 YP_005201548.1 CDS Rahaq2_3612 NC_016818.1 3832674 3833417 D PFAM: Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD 3832674..3833417 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792902 YP_005201549.1 CDS Rahaq2_3613 NC_016818.1 3833502 3834005 D PFAM: CS1 type fimbrial major subunit; CS1 type fimbrial major subunit 3833502..3834005 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792903 YP_005201550.1 CDS Rahaq2_3614 NC_016818.1 3834095 3836788 D hypothetical protein 3834095..3836788 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792904 YP_005201551.1 CDS Rahaq2_3615 NC_016818.1 3836785 3837939 D PFAM: CblD like pilus biogenesis initiator; CblD like pilus biogenesis initiator 3836785..3837939 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792905 YP_005201552.1 CDS Rahaq2_3617 NC_016818.1 3838263 3839363 D PFAM: CblD like pilus biogenesis initiator; CblD like pilus biogenesis initiator 3838263..3839363 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794196 YP_005201553.1 CDS Rahaq2_3618 NC_016818.1 3839419 3840168 D PFAM: Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD 3839419..3840168 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792907 YP_005201554.1 CDS Rahaq2_3619 NC_016818.1 3840478 3841872 D PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; MFS transporter, sugar porter family 3840478..3841872 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792908 YP_005201555.1 CDS Rahaq2_3620 NC_016818.1 3841913 3842470 D PFAM: SprT-like family; hypothetical protein 3841913..3842470 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792909 YP_005201556.1 CDS Rahaq2_3621 NC_016818.1 3842564 3843277 D PFAM: Endonuclease I; endonuclease I 3842564..3843277 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792910 YP_005201557.1 CDS Rahaq2_3622 NC_016818.1 3843365 3844096 D PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; RsmE family RNA methyltransferase 3843365..3844096 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794197 YP_005201558.1 CDS Rahaq2_3623 NC_016818.1 3844108 3845058 D PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic; glutathione synthetase 3844108..3845058 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792911 YP_005201559.1 CDS Rahaq2_3624 NC_016818.1 3845188 3845751 D PFAM: Uncharacterized ACR, COG1678; putative transcriptional regulator 3845188..3845751 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792912 YP_005201560.1 CDS Rahaq2_3625 NC_016818.1 3845751 3846179 D PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; RNAse H-fold protein YqgF 3845751..3846179 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792913 YP_005201561.1 CDS Rahaq2_3626 NC_016818.1 3846170 3847192 R PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; pilus retraction protein PilT complement(3846170..3847192) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792914 YP_005201562.1 CDS Rahaq2_3627 NC_016818.1 3847215 3847934 D PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; pyridoxal phosphate enzyme, YggS family 3847215..3847934 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792915 YP_005201563.1 CDS Rahaq2_3628 NC_016818.1 3848007 3848828 D PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 3848007..3848828 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792916 YP_005201564.1 CDS Rahaq2_3629 NC_016818.1 3848850 3849404 D PFAM: YGGT family; hypothetical protein 3848850..3849404 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792917 YP_005201565.1 CDS Rahaq2_3630 NC_016818.1 3849389 3849694 D PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: TIGR00251 family protein; hypothetical protein 3849389..3849694 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792918 YP_005201566.1 CDS Rahaq2_3631 NC_016818.1 3849716 3850324 D PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 3849716..3850324 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792919 YP_005201567.1 CDS Rahaq2_3632 NC_016818.1 3850317 3851453 D PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; putative oxygen-independent coproporphyrinogen III oxidase 3850317..3851453 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792920 YP_005201568.1 CDS Rahaq2_3633 NC_016818.1 3851542 3852276 R PFAM: Protein of unknown function (DUF2884); hypothetical protein complement(3851542..3852276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792921 YP_005201569.1 CDS Rahaq2_3634 NC_016818.1 3852301 3853227 R PFAM: Glutaminase; TIGRFAM: glutaminase A; glutaminase A complement(3852301..3853227) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794198 YP_005201570.1 CDS Rahaq2_3635 NC_016818.1 3853305 3853631 R PFAM: Protein with unknown function (DUF469); hypothetical protein complement(3853305..3853631) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792922 YP_005201571.1 CDS Rahaq2_3636 NC_016818.1 3853631 3854440 R PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(3853631..3854440) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792923 YP_005201572.1 CDS Rahaq2_3637 NC_016818.1 3854574 3855650 D PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 3854574..3855650 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792924 YP_005201573.1 CDS Rahaq2_3638 NC_016818.1 3855684 3855956 D PFAM: Bacterial Fe(2+) trafficking; Fe-S cluster protector protein 3855684..3855956 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792925 YP_005201574.1 CDS Rahaq2_3639 NC_016818.1 3856033 3857112 D PFAM: Transglycosylase SLT domain; Domain of unknown function (DUF3393); lytic murein transglycosylase 3856033..3857112 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794199 YP_005201575.1 CDS Rahaq2_3640 NC_016818.1 3857162 3858379 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3857162..3858379) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792926 YP_005201576.1 CDS Rahaq2_3641 NC_016818.1 3858337 3859341 R hypothetical protein complement(3858337..3859341) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792927 YP_005201577.1 CDS Rahaq2_3642 NC_016818.1 3859343 3860527 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3859343..3860527) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792928 YP_005201578.1 CDS Rahaq2_3643 NC_016818.1 3860524 3861105 R acetyltransferase complement(3860524..3861105) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792929 YP_005201579.1 CDS Rahaq2_3644 NC_016818.1 3861098 3862183 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3861098..3862183) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792930 YP_005201580.1 CDS Rahaq2_3645 NC_016818.1 3862170 3863393 R hypothetical protein complement(3862170..3863393) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794200 YP_005201581.1 CDS Rahaq2_3646 NC_016818.1 3863401 3864618 R PFAM: Polysaccharide biosynthesis protein; membrane protein complement(3863401..3864618) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792931 YP_005201582.1 CDS Rahaq2_3647 NC_016818.1 3864722 3866872 R PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide biosynthesis protein complement(3864722..3866872) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792932 YP_005201583.1 CDS Rahaq2_3648 NC_016818.1 3866869 3867318 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; manually curated; protein-tyrosine-phosphatase complement(3866869..3867318) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792933 YP_005201584.1 CDS Rahaq2_3649 NC_016818.1 3867325 3868455 R PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; periplasmic protein involved in polysaccharide export complement(3867325..3868455) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792934 YP_005201585.1 CDS Rahaq2_3650 NC_016818.1 3868538 3868630 D hypothetical protein 3868538..3868630 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792935 YP_005201586.1 CDS Rahaq2_3651 NC_016818.1 3868765 3869838 R PFAM: Glycosyl transferase family 4; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(3868765..3869838) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792936 YP_005201587.1 CDS Rahaq2_3652 NC_016818.1 3870201 3872363 R PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain; arginine/lysine/ornithine decarboxylase complement(3870201..3872363) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792937 YP_005201588.1 CDS Rahaq2_3654 NC_016818.1 3873278 3873388 D hypothetical protein 3873278..3873388 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792939 YP_005201589.1 CDS Rahaq2_3656 NC_016818.1 3874031 3874291 R PFAM: Plasmid protein of unknown function (Plasmid_RAQPRD); TIGRFAM: integrative conjugative element protein, RAQPRD family; hypothetical protein complement(3874031..3874291) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792941 YP_005201590.1 CDS Rahaq2_3657 NC_016818.1 3874857 3877277 D PFAM: S-type Pyocin; hypothetical protein 3874857..3877277 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794201 YP_005201591.1 CDS Rahaq2_3658 NC_016818.1 3877281 3877535 D PFAM: Colicin immunity protein / pyocin immunity protein; Colicin immunity protein / pyocin immunity protein 3877281..3877535 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792942 YP_005201592.1 CDS Rahaq2_3659 NC_016818.1 3877762 3877950 D PFAM: Transposase; transposase 3877762..3877950 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792943 YP_005201593.1 CDS Rahaq2_3660 NC_016818.1 3878131 3878733 D PFAM: Bacterial transferase hexapeptide (three repeats); serine acetyltransferase 3878131..3878733 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792944 YP_005201594.1 CDS Rahaq2_3662 NC_016818.1 3879205 3881193 D PFAM: Acyltransferase family; putative acyltransferase 3879205..3881193 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794202 YP_005201595.1 CDS Rahaq2_3667 NC_016818.1 3881953 3882129 R hypothetical protein complement(3881953..3882129) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792950 YP_005201596.1 CDS Rahaq2_3668 NC_016818.1 3882116 3882265 R hypothetical protein complement(3882116..3882265) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792951 YP_005201597.1 CDS Rahaq2_3669 NC_016818.1 3882401 3883162 D PFAM: Endonuclease/Exonuclease/phosphatase family; metal-dependent hydrolase 3882401..3883162 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792952 YP_005201598.1 CDS Rahaq2_3670 NC_016818.1 3883159 3884406 D PFAM: Phospholipase D Active site motif; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 3883159..3884406 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792953 YP_005201599.1 CDS Rahaq2_3671 NC_016818.1 3884406 3885368 D PFAM: Uncharacterised protein family (UPF0104); hypothetical protein 3884406..3885368 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792954 YP_005201600.1 CDS Rahaq2_3672 NC_016818.1 3885381 3886685 R PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters; natural resistance-associated macrophage protein metal ion transporter NRAMP complement(3885381..3886685) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792955 YP_005201601.1 CDS Rahaq2_3673 NC_016818.1 3887167 3888774 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 3887167..3888774 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792956 YP_005201602.1 CDS Rahaq2_3674 NC_016818.1 3888784 3889797 D PFAM: family; sugar ABC transporter periplasmic protein 3888784..3889797 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794203 YP_005201603.1 CDS Rahaq2_3675 NC_016818.1 3889886 3890956 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-D-mannose dehydratase complement(3889886..3890956) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792957 YP_005201604.1 CDS Rahaq2_3676 NC_016818.1 3891096 3892250 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3891096..3892250) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792958 YP_005201605.1 CDS Rahaq2_3677 NC_016818.1 3892336 3893715 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase complement(3892336..3893715) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792959 YP_005201606.1 CDS Rahaq2_3678 NC_016818.1 3893730 3895151 R PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(3893730..3895151) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792960 YP_005201607.1 CDS Rahaq2_3679 NC_016818.1 3895270 3896259 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(3895270..3896259) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792961 YP_005201608.1 CDS Rahaq2_3680 NC_016818.1 3896268 3897731 R PFAM: Polysaccharide biosynthesis protein; membrane protein complement(3896268..3897731) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794204 YP_005201609.1 CDS Rahaq2_3681 NC_016818.1 3897750 3898766 R PFAM: Polysaccharide pyruvyl transferase; Polysaccharide pyruvyl transferase complement(3897750..3898766) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792962 YP_005201610.1 CDS Rahaq2_3682 NC_016818.1 3898771 3900009 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3898771..3900009) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792963 YP_005201611.1 CDS Rahaq2_3683 NC_016818.1 3900026 3901717 R TIGRFAM: parallel beta-helix repeat (two copies); hypothetical protein complement(3900026..3901717) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794205 YP_005201612.1 CDS Rahaq2_3684 NC_016818.1 3901735 3902973 R hypothetical protein complement(3901735..3902973) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792964 YP_005201613.1 CDS Rahaq2_3685 NC_016818.1 3903049 3904032 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3903049..3904032) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792965 YP_005201614.1 CDS Rahaq2_3686 NC_016818.1 3904058 3905215 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3904058..3905215) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792966 YP_005201615.1 CDS Rahaq2_3687 NC_016818.1 3905296 3907476 R PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide biosynthesis protein complement(3905296..3907476) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792967 YP_005201616.1 CDS Rahaq2_3688 NC_016818.1 3907495 3907929 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine-phosphatase complement(3907495..3907929) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792968 YP_005201617.1 CDS Rahaq2_3689 NC_016818.1 3907932 3909065 R PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; periplasmic protein involved in polysaccharide export complement(3907932..3909065) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792969 YP_005201618.1 CDS Rahaq2_3690 NC_016818.1 3909163 3910593 R PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(3909163..3910593) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792970 YP_005201619.1 CDS Rahaq2_3691 NC_016818.1 3910763 3912856 R PFAM: Bacterial putative lipoprotein (DUF940); putative lipoprotein complement(3910763..3912856) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792971 YP_005201620.1 CDS Rahaq2_3692 NC_016818.1 3912853 3913596 R PFAM: SLBB-domain like (DUF1017); hypothetical protein complement(3912853..3913596) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792972 YP_005201621.1 CDS Rahaq2_3693 NC_016818.1 3913593 3914249 R PFAM: Protein of unknown function (DUF2886); hypothetical protein complement(3913593..3914249) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792973 YP_005201622.1 CDS Rahaq2_3694 NC_016818.1 3914325 3914540 R hypothetical protein complement(3914325..3914540) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792974 YP_005201623.1 CDS Rahaq2_3695 NC_016818.1 3914828 3915514 R PFAM: EAL domain; EAL domain-containing protein complement(3914828..3915514) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792975 YP_005201624.1 CDS Rahaq2_3696 NC_016818.1 3915590 3916186 R PFAM: Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain complement(3915590..3916186) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792976 YP_005201625.1 CDS Rahaq2_3697 NC_016818.1 3917243 3917500 R putative transcriptional regulator complement(3917243..3917500) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792977 YP_005201626.1 CDS Rahaq2_3698 NC_016818.1 3917497 3917946 R hypothetical protein complement(3917497..3917946) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792978 YP_005201627.1 CDS Rahaq2_3700 NC_016818.1 3918266 3918448 R hypothetical protein complement(3918266..3918448) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792980 YP_005201628.1 CDS Rahaq2_3701 NC_016818.1 3918534 3919082 R PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator complement(3918534..3919082) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794206 YP_005201629.1 CDS Rahaq2_3702 NC_016818.1 3919181 3919849 D PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; putative branched-chain amino acid permease (azaleucine resistance) 3919181..3919849 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792981 YP_005201630.1 CDS Rahaq2_3703 NC_016818.1 3919846 3920169 D PFAM: Branched-chain amino acid transport protein (AzlD); Branched-chain amino acid transport protein AzlD 3919846..3920169 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792982 YP_005201631.1 CDS Rahaq2_3704 NC_016818.1 3920221 3921582 R PFAM: Amino acid permease; amino acid transporter complement(3920221..3921582) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794207 YP_005201632.1 CDS Rahaq2_3705 NC_016818.1 3922190 3922996 D PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 3922190..3922996 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792983 YP_005201633.1 CDS Rahaq2_3706 NC_016818.1 3922983 3923621 R PFAM: LysE type translocator; putative threonine efflux protein complement(3922983..3923621) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792984 YP_005201634.1 CDS Rahaq2_3707 NC_016818.1 3923618 3924910 R hypothetical protein complement(3923618..3924910) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792985 YP_005201635.1 CDS Rahaq2_3708 NC_016818.1 3925216 3926034 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 3925216..3926034 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792986 YP_005201636.1 CDS Rahaq2_3709 NC_016818.1 3926034 3926858 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 3926034..3926858 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792987 YP_005201637.1 CDS Rahaq2_3710 NC_016818.1 3926903 3928039 D PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 3926903..3928039 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792988 YP_005201638.1 CDS Rahaq2_3711 NC_016818.1 3928121 3929905 R PFAM: Chitinase class I; Carbohydrate binding domain; chitin-binding domain-containing protein complement(3928121..3929905) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792989 YP_005201639.1 CDS Rahaq2_3712 NC_016818.1 3930570 3931511 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(3930570..3931511) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792990 YP_005201640.1 CDS Rahaq2_3713 NC_016818.1 3931653 3932195 R PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847); putative secretion activating protein complement(3931653..3932195) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792991 YP_005201641.1 CDS Rahaq2_3714 NC_016818.1 3932217 3932663 R DNA-binding protein complement(3932217..3932663) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792992 YP_005201642.1 CDS Rahaq2_3715 NC_016818.1 3933111 3935177 D PFAM: Glycosyl hydrolases family 18; Carbohydrate binding domain; chitinase 3933111..3935177 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792993 YP_005201643.1 CDS Rahaq2_3716 NC_016818.1 3935247 3936143 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(3935247..3936143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792994 YP_005201644.1 CDS Rahaq2_3717 NC_016818.1 3936259 3937779 D PFAM: Major Facilitator Superfamily; sugar phosphate permease 3936259..3937779 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792995 YP_005201645.1 CDS Rahaq2_3718 NC_016818.1 3937788 3938267 R PFAM: 'Cold-shock' DNA-binding domain; cold shock protein complement(3937788..3938267) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792996 YP_005201646.1 CDS Rahaq2_3719 NC_016818.1 3938378 3939031 R TIGRFAM: DNA alkylation damage repair protein AlkB; alkylated DNA repair protein complement(3938378..3939031) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792997 YP_005201647.1 CDS Rahaq2_3720 NC_016818.1 3939169 3939987 D PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 3939169..3939987 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794208 YP_005201648.1 CDS Rahaq2_3721 NC_016818.1 3940825 3943014 D PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain; arginine/lysine/ornithine decarboxylase 3940825..3943014 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792998 YP_005201649.1 CDS Rahaq2_3722 NC_016818.1 3943030 3944346 D PFAM: Amino acid permease; TIGRFAM: transporter, basic amino acid/polyamine antiporter (APA) family; transporter, basic amino acid/polyamine antiporter (APA) family 3943030..3944346 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792999 YP_005201650.1 CDS Rahaq2_3723 NC_016818.1 3944403 3945740 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: glucarate dehydratase; glucarate dehydratase complement(3944403..3945740) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794209 YP_005201651.1 CDS Rahaq2_3724 NC_016818.1 3945769 3947109 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase; L-alanine-DL-glutamate epimerase-like protein complement(3945769..3947109) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793000 YP_005201652.1 CDS Rahaq2_3725 NC_016818.1 3947109 3948482 R PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter; D-galactonate transporter complement(3947109..3948482) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793001 YP_005201653.1 CDS Rahaq2_3726 NC_016818.1 3948710 3949870 R PFAM: Putative sugar diacid recognition; sugar diacid utilization regulator complement(3948710..3949870) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793002 YP_005201654.1 CDS Rahaq2_3727 NC_016818.1 3950170 3950628 R PFAM: Transposase IS200 like; transposase complement(3950170..3950628) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793003 YP_005201655.1 CDS Rahaq2_3729 NC_016818.1 3950822 3952273 R PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; periplasmic serine protease, Do/DeqQ family complement(3950822..3952273) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793005 YP_005201656.1 CDS Rahaq2_3730 NC_016818.1 3952506 3954020 R PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; deoxyguanosinetriphosphate triphosphohydrolase complement(3952506..3954020) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793006 YP_005201657.1 CDS Rahaq2_3731 NC_016818.1 3954204 3954908 D PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3954204..3954908 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793007 YP_005201658.1 CDS Rahaq2_3732 NC_016818.1 3954908 3955720 D PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein 3954908..3955720 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793008 YP_005201659.1 CDS Rahaq2_3733 NC_016818.1 3955818 3956177 R PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Iron-sulfur cluster assembly accessory protein complement(3955818..3956177) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793009 YP_005201660.1 CDS Rahaq2_3734 NC_016818.1 3956266 3957729 R PFAM: Voltage gated chloride channel; chloride channel protein EriC complement(3956266..3957729) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793010 YP_005201661.1 CDS Rahaq2_3735 NC_016818.1 3957915 3959201 D PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 3957915..3959201 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793011 YP_005201662.1 CDS Rahaq2_3736 NC_016818.1 3959340 3962102 D PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain; outer membrane autotransporter barrel domain-containing protein 3959340..3962102 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793012 YP_005201663.1 CDS Rahaq2_3737 NC_016818.1 3962151 3964139 R PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease complement(3962151..3964139) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793013 YP_005201664.1 CDS Rahaq2_3738 NC_016818.1 3964136 3965038 R PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein complement(3964136..3965038) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793014 YP_005201665.1 CDS Rahaq2_3739 NC_016818.1 3965040 3965852 R PFAM: ABC transporter; cobalamin/Fe3+-siderophore ABC transporter ATPase complement(3965040..3965852) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793015 YP_005201666.1 CDS Rahaq2_3740 NC_016818.1 3965948 3968176 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(3965948..3968176) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794210 YP_005201667.1 CDS Rahaq2_3741 NC_016818.1 3968635 3969594 D PFAM: Inosine-uridine preferring nucleoside hydrolase; Inosine-uridine nucleoside N-ribohydrolase 3968635..3969594 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793016 YP_005201668.1 CDS Rahaq2_3742 NC_016818.1 3969615 3970847 D PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; nucleoside permease 3969615..3970847 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793017 YP_005201669.1 CDS Rahaq2_3743 NC_016818.1 3970922 3971077 R hypothetical protein complement(3970922..3971077) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794211 YP_005201670.1 CDS Rahaq2_3744 NC_016818.1 3971205 3971798 R hypothetical protein complement(3971205..3971798) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793018 YP_005201671.1 CDS Rahaq2_3745 NC_016818.1 3971785 3974067 R hypothetical protein complement(3971785..3974067) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793019 YP_005201672.1 CDS Rahaq2_3746 NC_016818.1 3974539 3977163 R PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; penicillin-binding protein 1B complement(3974539..3977163) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794212 YP_005201673.1 CDS Rahaq2_3747 NC_016818.1 3977371 3979815 R PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB; ATP-dependent helicase HrpB complement(3977371..3979815) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793020 YP_005201674.1 CDS Rahaq2_3748 NC_016818.1 3979912 3980454 D PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; 2'-5' RNA ligase 3979912..3980454 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793021 YP_005201675.1 CDS Rahaq2_3749 NC_016818.1 3980503 3981237 D PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 3980503..3981237 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793022 YP_005201676.1 CDS Rahaq2_3750 NC_016818.1 3981468 3981923 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; RNA polymerase-binding protein DksA 3981468..3981923 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793023 YP_005201677.1 CDS Rahaq2_3751 NC_016818.1 3981986 3982867 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; glutamyl-queuosine tRNA(Asp) synthetase 3981986..3982867 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793024 YP_005201678.1 CDS Rahaq2_3752 NC_016818.1 3982991 3984706 D PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; poly(A) polymerase 3982991..3984706 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793025 YP_005201679.1 CDS Rahaq2_3753 NC_016818.1 3984703 3985182 D PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3984703..3985182 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793026 YP_005201680.1 CDS Rahaq2_3754 NC_016818.1 3985188 3986573 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(3985188..3986573) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793027 YP_005201681.1 CDS Rahaq2_3755 NC_016818.1 3986570 3987256 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(3986570..3987256) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793028 YP_005201682.1 CDS Rahaq2_3756 NC_016818.1 3987415 3988209 D PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3987415..3988209 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793029 YP_005201683.1 CDS Rahaq2_3757 NC_016818.1 3988224 3989078 D PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; pantoate--beta-alanine ligase 3988224..3989078 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793030 YP_005201684.1 CDS Rahaq2_3758 NC_016818.1 3989187 3989567 D PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; L-aspartate-alpha-decarboxylase 3989187..3989567 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794213 YP_005201685.1 CDS Rahaq2_3759 NC_016818.1 3989716 3990222 D hypothetical protein 3989716..3990222 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793031 YP_005201686.1 CDS Rahaq2_3760 NC_016818.1 3990249 3991049 D PFAM: Integrase core domain; transposase 3990249..3991049 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793032 YP_005201687.1 CDS Rahaq2_3761 NC_016818.1 3991105 3991875 R PFAM: ABC-2 type transporter; ABC-type polysaccharide/polyol phosphate export systems permease complement(3991105..3991875) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793033 YP_005201688.1 CDS Rahaq2_3762 NC_016818.1 3991875 3992798 R PFAM: ABC transporter; multidrug ABC transporter ATPase complement(3991875..3992798) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793034 YP_005201689.1 CDS Rahaq2_3763 NC_016818.1 3992932 3993588 D PFAM: Carbonic anhydrase; carbonic anhydrase 3992932..3993588 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793035 YP_005201690.1 CDS Rahaq2_3766 NC_016818.1 3994277 3994591 D PFAM: Protein of unknown function (DUF1493); hypothetical protein 3994277..3994591 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794214 YP_005201691.1 CDS Rahaq2_3768 NC_016818.1 3995459 3995914 D hypothetical protein 3995459..3995914 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793039 YP_005201692.1 CDS Rahaq2_3769 NC_016818.1 3996843 3997175 D hypothetical protein 3996843..3997175 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794215 YP_005201693.1 CDS Rahaq2_3771 NC_016818.1 3997780 3998316 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(3997780..3998316) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793041 YP_005201694.1 CDS Rahaq2_3772 NC_016818.1 3998460 3999068 R hypothetical protein complement(3998460..3999068) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793042 YP_005201695.1 CDS Rahaq2_3773 NC_016818.1 3999061 3999834 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(3999061..3999834) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793043 YP_005201696.1 CDS Rahaq2_3774 NC_016818.1 3999914 4000276 R PFAM: Glucitol operon activator protein (GutM); glucitol operon activator complement(3999914..4000276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793044 YP_005201697.1 CDS Rahaq2_3775 NC_016818.1 4000329 4001108 R PFAM: short chain dehydrogenase; dehydrogenase complement(4000329..4001108) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793045 YP_005201698.1 CDS Rahaq2_3776 NC_016818.1 4001131 4001493 R PFAM: PTS system glucitol/sorbitol-specific IIA component; TIGRFAM: PTS system, glucitol/sorbitol-specific IIA component; phosphotransferase system sorbitol-specific component IIA complement(4001131..4001493) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793046 YP_005201699.1 CDS Rahaq2_3777 NC_016818.1 4001503 4002492 R PFAM: Sorbitol phosphotransferase enzyme II C-terminus; Sorbitol phosphotransferase enzyme II N-terminus; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC component; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(4001503..4002492) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793047 YP_005201700.1 CDS Rahaq2_3778 NC_016818.1 4002541 4003089 R PFAM: PTS system enzyme II sorbitol-specific factor; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC component; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(4002541..4003089) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793048 YP_005201701.1 CDS Rahaq2_3779 NC_016818.1 4003347 4004951 R PFAM: Multicopper oxidase; putative multicopper oxidase complement(4003347..4004951) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793049 YP_005201702.1 CDS Rahaq2_3780 NC_016818.1 4005162 4005509 D PFAM: Bacterial chaperone lipoprotein (PulS_OutS); chaperone lipoprotein 4005162..4005509 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793050 YP_005201703.1 CDS Rahaq2_3781 NC_016818.1 4005723 4006598 D PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase; spermidine synthase 4005723..4006598 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793051 YP_005201704.1 CDS Rahaq2_3782 NC_016818.1 4006627 4007421 D PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form; S-adenosylmethionine decarboxylase 4006627..4007421 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793052 YP_005201705.1 CDS Rahaq2_3783 NC_016818.1 4007852 4008727 D hypothetical protein 4007852..4008727 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793053 YP_005201706.1 CDS Rahaq2_3784 NC_016818.1 4008831 4009709 D PFAM: EamA-like transporter family; putative permease, DMT superfamily 4008831..4009709 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793054 YP_005201707.1 CDS Rahaq2_3785 NC_016818.1 4009711 4010076 R PFAM: Uncharacterised protein family (UPF0231); hypothetical protein complement(4009711..4010076) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793055 YP_005201708.1 CDS Rahaq2_3786 NC_016818.1 4010153 4012750 R PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; aconitate hydratase 2 complement(4010153..4012750) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793056 YP_005201709.1 CDS Rahaq2_3787 NC_016818.1 4013355 4013846 D hypothetical protein 4013355..4013846 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793057 YP_005201710.1 CDS Rahaq2_3788 NC_016818.1 4013923 4014909 R PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA complement(4013923..4014909) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793058 YP_005201711.1 CDS Rahaq2_3789 NC_016818.1 4014917 4017424 R PFAM: Fimbrial Usher protein; P pilus assembly protein, porin PapC complement(4014917..4017424) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793059 YP_005201712.1 CDS Rahaq2_3790 NC_016818.1 4017433 4018146 R PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD complement(4017433..4018146) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794216 YP_005201713.1 CDS Rahaq2_3791 NC_016818.1 4018252 4018776 R PFAM: Fimbrial protein; P pilus assembly protein, pilin FimA complement(4018252..4018776) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793060 YP_005201714.1 CDS Rahaq2_3792 NC_016818.1 4019038 4020126 R PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(4019038..4020126) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794217 YP_005201715.1 CDS Rahaq2_3793 NC_016818.1 4020151 4020987 R PFAM: Binding-protein-dependent transport system inner membrane component; spermidine/putrescine ABC transporter permease II complement(4020151..4020987) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794218 YP_005201716.1 CDS Rahaq2_3794 NC_016818.1 4020984 4021847 R PFAM: Binding-protein-dependent transport system inner membrane component; spermidine/putrescine ABC transporter permease I complement(4020984..4021847) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793061 YP_005201717.1 CDS Rahaq2_3795 NC_016818.1 4021834 4022925 R PFAM: ABC transporter; spermidine/putrescine ABC transporter ATPase complement(4021834..4022925) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793062 YP_005201718.1 CDS Rahaq2_3796 NC_016818.1 4023155 4023985 D PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase 4023155..4023985 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793063 YP_005201719.1 CDS Rahaq2_3797 NC_016818.1 4024008 4025120 D PFAM: ROK family; transcriptional regulator/sugar kinase 4024008..4025120 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793064 YP_005201720.1 CDS Rahaq2_3798 NC_016818.1 4025195 4027603 R PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase complement(4025195..4027603) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793065 YP_005201721.1 CDS Rahaq2_3799 NC_016818.1 4027858 4029282 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(4027858..4029282) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793066 YP_005201722.1 CDS Rahaq2_3800 NC_016818.1 4029494 4031389 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form complement(4029494..4031389) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793067 YP_005201723.1 CDS Rahaq2_3801 NC_016818.1 4031403 4034066 R PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type; pyruvate dehydrogenase E1 component, homodimeric type complement(4031403..4034066) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793068 YP_005201724.1 CDS Rahaq2_3802 NC_016818.1 4034230 4035000 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(4034230..4035000) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794219 YP_005201725.1 CDS Rahaq2_3803 NC_016818.1 4035429 4036799 D PFAM: Amino acid permease; gamma-aminobutyrate permease 4035429..4036799 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793069 YP_005201726.1 CDS Rahaq2_3804 NC_016818.1 4037013 4038455 D PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter 4037013..4038455 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794220 YP_005201727.1 CDS Rahaq2_3805 NC_016818.1 4038448 4039422 D PFAM: Glycosyl hydrolases family 43; putative beta-xylosidase 4038448..4039422 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794221 YP_005201728.1 CDS Rahaq2_3806 NC_016818.1 4039491 4040345 R PFAM: CobD/Cbib protein; membrane protein required for beta-lactamase induction complement(4039491..4040345) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793070 YP_005201729.1 CDS Rahaq2_3807 NC_016818.1 4040405 4040977 R PFAM: N-acetylmuramoyl-L-alanine amidase; negative regulator of beta-lactamase expression complement(4040405..4040977) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793071 YP_005201730.1 CDS Rahaq2_3808 NC_016818.1 4041072 4041965 D PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 4041072..4041965 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793072 YP_005201731.1 CDS Rahaq2_3809 NC_016818.1 4042257 4042706 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 4042257..4042706 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793073 YP_005201732.1 CDS Rahaq2_3810 NC_016818.1 4042706 4044202 D PFAM: Type II/IV secretion system protein; type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 4042706..4044202 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793074 YP_005201733.1 CDS Rahaq2_3811 NC_016818.1 4044199 4045419 D PFAM: Bacterial type II secretion system protein F domain; type II secretory pathway, component PulF 4044199..4045419 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793075 YP_005201734.1 CDS Rahaq2_3812 NC_016818.1 4045479 4046519 R PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: guanosine monophosphate reductase, eukaryotic; guanosine monophosphate reductase, eukaryotic complement(4045479..4046519) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794222 YP_005201735.1 CDS Rahaq2_3813 NC_016818.1 4046762 4047358 D PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase 4046762..4047358 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794223 YP_005201736.1 CDS Rahaq2_3814 NC_016818.1 4047384 4048136 D PFAM: Protein of unknown function (DUF1342); hypothetical protein 4047384..4048136 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793076 YP_005201737.1 CDS Rahaq2_3815 NC_016818.1 4048146 4048343 D PFAM: Domain of unknown function (DUF329); hypothetical protein 4048146..4048343 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793077 YP_005201738.1 CDS Rahaq2_3816 NC_016818.1 4048428 4048829 R PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; mutator mutT protein complement(4048428..4048829) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793078 YP_005201739.1 CDS Rahaq2_3817 NC_016818.1 4048944 4051661 R PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; Preprotein translocase subunit SecA complement(4048944..4051661) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793079 YP_005201740.1 CDS Rahaq2_3818 NC_016818.1 4051742 4052269 R PFAM: Secretion monitor precursor protein (SecM); Secretion monitor precursor protein (SecM) complement(4051742..4052269) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793080 YP_005201741.1 CDS Rahaq2_3819 NC_016818.1 4052296 4052820 D PFAM: Protein of unknown function (DUF721); hypothetical protein 4052296..4052820 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793081 YP_005201742.1 CDS Rahaq2_3820 NC_016818.1 4052835 4053779 R PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase complement(4052835..4053779) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793082 YP_005201743.1 CDS Rahaq2_3821 NC_016818.1 4053852 4055006 R PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ complement(4053852..4055006) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793083 YP_005201744.1 CDS Rahaq2_3822 NC_016818.1 4055078 4056334 R PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein FtsA complement(4055078..4056334) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793084 YP_005201745.1 CDS Rahaq2_3823 NC_016818.1 4056331 4057167 R PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type; cell division septal protein complement(4056331..4057167) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793085 YP_005201746.1 CDS Rahaq2_3824 NC_016818.1 4057169 4058089 R PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase complement(4057169..4058089) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793086 YP_005201747.1 CDS Rahaq2_3825 NC_016818.1 4058082 4059569 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(4058082..4059569) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793087 YP_005201748.1 CDS Rahaq2_3826 NC_016818.1 4059636 4060703 R PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase complement(4059636..4060703) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793088 YP_005201749.1 CDS Rahaq2_3827 NC_016818.1 4060700 4061908 R PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; cell division protein FtsW complement(4060700..4061908) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793089 YP_005201750.1 CDS Rahaq2_3828 NC_016818.1 4061908 4063224 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(4061908..4063224) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793090 YP_005201751.1 CDS Rahaq2_3829 NC_016818.1 4063227 4064309 R PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(4063227..4064309) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793091 YP_005201752.1 CDS Rahaq2_3830 NC_016818.1 4064303 4065664 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(4064303..4065664) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793092 YP_005201753.1 CDS Rahaq2_3831 NC_016818.1 4065661 4067148 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl tripeptide synthetase complement(4065661..4067148) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793093 YP_005201754.1 CDS Rahaq2_3832 NC_016818.1 4067135 4068898 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI/penicillin-binding protein 2 complement(4067135..4068898) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793094 YP_005201755.1 CDS Rahaq2_3833 NC_016818.1 4068926 4069246 R PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL; cell division protein FtsL complement(4068926..4069246) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793095 YP_005201756.1 CDS Rahaq2_3834 NC_016818.1 4069243 4070184 R PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(4069243..4070184) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793096 YP_005201757.1 CDS Rahaq2_3835 NC_016818.1 4070187 4070645 R PFAM: MraZ protein; TIGRFAM: mraZ protein; mraZ protein complement(4070187..4070645) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793097 YP_005201758.1 CDS Rahaq2_3836 NC_016818.1 4071352 4072356 R PFAM: Bacterial regulatory proteins, lacI family; family; TIGRFAM: D-fructose-responsive transcription factor; D-fructose-responsive transcription factor complement(4071352..4072356) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793098 YP_005201759.1 CDS Rahaq2_3837 NC_016818.1 4072524 4073015 R PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit complement(4072524..4073015) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793099 YP_005201760.1 CDS Rahaq2_3838 NC_016818.1 4073018 4074736 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(4073018..4074736) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793100 YP_005201761.1 CDS Rahaq2_3839 NC_016818.1 4075157 4076953 R PFAM: AMP-binding enzyme; AMP-forming long-chain acyl-CoA synthetase complement(4075157..4076953) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793101 YP_005201762.1 CDS Rahaq2_3840 NC_016818.1 4077242 4078189 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4077242..4078189) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793102 YP_005201763.1 CDS Rahaq2_3841 NC_016818.1 4078933 4080522 D PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase 4078933..4080522 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793103 YP_005201764.1 CDS Rahaq2_3842 NC_016818.1 4080525 4081616 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4080525..4081616 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794224 YP_005201765.1 CDS Rahaq2_3843 NC_016818.1 4081618 4083018 D PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 4081618..4083018 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793104 YP_005201766.1 CDS Rahaq2_3844 NC_016818.1 4083030 4083632 D PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 4083030..4083632 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793105 YP_005201767.1 CDS Rahaq2_3845 NC_016818.1 4083695 4084858 R PFAM: Major Facilitator Superfamily; TIGRFAM: sugar efflux transporter; arabinose efflux permease family protein complement(4083695..4084858) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793106 YP_005201768.1 CDS Rahaq2_3846 NC_016818.1 4085039 4085224 R hypothetical protein complement(4085039..4085224) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793107 YP_005201769.1 CDS Rahaq2_3847 NC_016818.1 4085327 4086988 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; ABC transporter substrate-binding protein 4085327..4086988 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793108 YP_005201770.1 CDS Rahaq2_3848 NC_016818.1 4087302 4088285 D PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein; thiamine ABC transporter substrate-binding protein 4087302..4088285 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793109 YP_005201771.1 CDS Rahaq2_3849 NC_016818.1 4088261 4089871 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: thiamine ABC transporter, permease protein; thiamine ABC transporter, permease protein 4088261..4089871 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794225 YP_005201772.1 CDS Rahaq2_3850 NC_016818.1 4089855 4090565 D PFAM: ABC transporter; TIGRFAM: thiamine ABC transporter, ATP-binding protein; thiamine ABC transporter ATP-binding protein 4089855..4090565 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793110 YP_005201773.1 CDS Rahaq2_3851 NC_016818.1 4090555 4091322 R PFAM: SNARE associated Golgi protein; putative membrane-associated protein complement(4090555..4091322) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793111 YP_005201774.1 CDS Rahaq2_3852 NC_016818.1 4091630 4093972 D PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; DNA polymerase elongation subunit 4091630..4093972 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793112 YP_005201775.1 CDS Rahaq2_3853 NC_016818.1 4094184 4097081 D PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain; DNA/RNA helicase 4094184..4097081 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793113 YP_005201776.1 CDS Rahaq2_3854 NC_016818.1 4097148 4097849 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase 4097148..4097849 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794226 YP_005201777.1 CDS Rahaq2_3855 NC_016818.1 4097986 4098444 R PFAM: Transposase IS200 like; transposase complement(4097986..4098444) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794227 YP_005201778.1 CDS Rahaq2_3857 NC_016818.1 4098648 4099469 R PFAM: DnaJ domain; Tellurite resistance protein TerB; protein with DnaJ-like domain complement(4098648..4099469) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793115 YP_005201779.1 CDS Rahaq2_3858 NC_016818.1 4099651 4102026 D PFAM: Organic solvent tolerance protein; OstA-like protein; organic solvent tolerance protein OstA 4099651..4102026 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793116 YP_005201780.1 CDS Rahaq2_3859 NC_016818.1 4102113 4103408 D PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase 4102113..4103408 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793117 YP_005201781.1 CDS Rahaq2_3860 NC_016818.1 4103398 4104405 D PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 4103398..4104405 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793118 YP_005201782.1 CDS Rahaq2_3861 NC_016818.1 4104411 4105238 D PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase 4104411..4105238 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793119 YP_005201783.1 CDS Rahaq2_3862 NC_016818.1 4105243 4105620 D PFAM: Protein of unknown function (DUF525); Mg2+/Co2+ transport protein 4105243..4105620 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793120 YP_005201784.1 CDS Rahaq2_3863 NC_016818.1 4105626 4106480 D PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); symmetrical bis(5'-nucleosyl)-tetraphosphatase 4105626..4106480 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793121 YP_005201785.1 CDS Rahaq2_3864 NC_016818.1 4106561 4107046 R PFAM: Dihydrofolate reductase; dihydrofolate reductase complement(4106561..4107046) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793122 YP_005201786.1 CDS Rahaq2_3865 NC_016818.1 4107315 4107779 R PFAM: Protein of unknown function (DUF1212); hypothetical protein complement(4107315..4107779) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793123 YP_005201787.1 CDS Rahaq2_3866 NC_016818.1 4107776 4108585 R PFAM: Protein of unknown function (DUF1212); hypothetical protein complement(4107776..4108585) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793124 YP_005201788.1 CDS Rahaq2_3867 NC_016818.1 4108690 4109304 D PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein; putative threonine efflux protein 4108690..4109304 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793125 YP_005201789.1 CDS Rahaq2_3868 NC_016818.1 4109361 4111214 R PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; transporter, monovalent cation:proton antiporter-2 (CPA2) family complement(4109361..4111214) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793126 YP_005201790.1 CDS Rahaq2_3869 NC_016818.1 4111207 4111761 R PFAM: Flavodoxin-like fold; putative NADPH-quinone reductase (modulator of drug activity B) complement(4111207..4111761) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794228 YP_005201791.1 CDS Rahaq2_3870 NC_016818.1 4111880 4114471 R PFAM: Glycosyl hydrolases family 18; Chitinase A, N-terminal domain; Carbohydrate binding domain; chitinase complement(4111880..4114471) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793127 YP_005201792.1 CDS Rahaq2_3871 NC_016818.1 4114890 4115942 R hypothetical protein complement(4114890..4115942) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793128 YP_005201793.1 CDS Rahaq2_3872 NC_016818.1 4116300 4119524 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(4116300..4119524) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793129 YP_005201794.1 CDS Rahaq2_3873 NC_016818.1 4119541 4120692 R PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(4119541..4120692) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793130 YP_005201795.1 CDS Rahaq2_3874 NC_016818.1 4121171 4121992 R PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(4121171..4121992) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794229 YP_005201796.1 CDS Rahaq2_3875 NC_016818.1 4122682 4123827 D hypothetical protein 4122682..4123827 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793131 YP_005201797.1 CDS Rahaq2_3876 NC_016818.1 4123989 4124864 D PFAM: SMP-30/Gluconolaconase/LRE-like region; gluconolactonase 4123989..4124864 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793132 YP_005201798.1 CDS Rahaq2_3877 NC_016818.1 4124931 4125884 R PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase complement(4124931..4125884) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793133 YP_005201799.1 CDS Rahaq2_3878 NC_016818.1 4125865 4126335 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase complement(4125865..4126335) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793134 YP_005201800.1 CDS Rahaq2_3879 NC_016818.1 4126341 4126847 R PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase complement(4126341..4126847) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793135 YP_005201801.1 CDS Rahaq2_3880 NC_016818.1 4126847 4129663 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(4126847..4129663) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794230 YP_005201802.1 CDS Rahaq2_3881 NC_016818.1 4129725 4130663 R PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin kinase/FMN adenylyltransferase complement(4129725..4130663) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794231 YP_005201803.1 CDS Rahaq2_3882 NC_016818.1 4131103 4131366 D PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 4131103..4131366 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793136 YP_005201804.1 CDS Rahaq2_3883 NC_016818.1 4131439 4132326 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4131439..4132326) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793137 YP_005201805.1 CDS Rahaq2_3884 NC_016818.1 4132363 4133541 R PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(4132363..4133541) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793138 YP_005201806.1 CDS Rahaq2_3885 NC_016818.1 4133772 4134890 R PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ; chaperone protein DnaJ complement(4133772..4134890) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793139 YP_005201807.1 CDS Rahaq2_3886 NC_016818.1 4134990 4136891 R PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein DnaK complement(4134990..4136891) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794232 YP_005201808.1 CDS Rahaq2_3887 NC_016818.1 4137211 4137810 D PFAM: GPR1/FUN34/yaaH family; hypothetical protein 4137211..4137810 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793140 YP_005201809.1 CDS Rahaq2_3888 NC_016818.1 4137888 4139210 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(4137888..4139210) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793141 YP_005201810.1 CDS Rahaq2_3889 NC_016818.1 4139353 4139940 R PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein complement(4139353..4139940) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793142 YP_005201811.1 CDS Rahaq2_3890 NC_016818.1 4140066 4141019 R PFAM: Transaldolase; TIGRFAM: transaldolase; transaldolase complement(4140066..4141019) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793143 YP_005201812.1 CDS Rahaq2_3891 NC_016818.1 4141295 4142722 D PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; amino acid carrier protein 4141295..4142722 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793144 YP_005201813.1 CDS Rahaq2_3892 NC_016818.1 4142835 4143608 D PFAM: Protein of unknown function (DUF328); hypothetical protein 4142835..4143608 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793145 YP_005201814.1 CDS Rahaq2_3893 NC_016818.1 4143676 4144965 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; threonine synthase complement(4143676..4144965) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793146 YP_005201815.1 CDS Rahaq2_3894 NC_016818.1 4144990 4145919 R PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase; homoserine kinase complement(4144990..4145919) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794233 YP_005201816.1 CDS Rahaq2_3895 NC_016818.1 4145921 4148380 R PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; manually curated; aspartate kinase complement(4145921..4148380) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793147 YP_005201817.1 CDS Rahaq2_3897 NC_016818.1 4148755 4149441 R PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1; RNA methyltransferase, TrmH family, group 1 complement(4148755..4149441) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793148 YP_005201818.1 CDS Rahaq2_3898 NC_016818.1 4150108 4150824 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 4150108..4150824 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793149 YP_005201819.1 CDS Rahaq2_3899 NC_016818.1 4150922 4151404 R PFAM: CreA protein; hypothetical protein complement(4150922..4151404) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793150 YP_005201820.1 CDS Rahaq2_3900 NC_016818.1 4151613 4152476 D PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 4151613..4152476 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793151 YP_005201821.1 CDS Rahaq2_3901 NC_016818.1 4152489 4153136 R PFAM: Phosphoglycerate mutase family; fructose-2,6-bisphosphatase complement(4152489..4153136) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793152 YP_005201822.1 CDS Rahaq2_3902 NC_016818.1 4153188 4153721 D PFAM: Protein of unknown function DUF84; TIGRFAM: inosine/xanthosine triphosphatase; inosine/xanthosine triphosphatase 4153188..4153721 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793153 YP_005201823.1 CDS Rahaq2_3903 NC_016818.1 4153745 4154080 R PFAM: Trp repressor protein; TIGRFAM: trp operon repressor, proteobacterial; trp operon repressor complement(4153745..4154080) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793154 YP_005201824.1 CDS Rahaq2_3904 NC_016818.1 4154137 4156065 R PFAM: Transglycosylase SLT domain; lytic murein transglycosylase complement(4154137..4156065) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793155 YP_005201825.1 CDS Rahaq2_3905 NC_016818.1 4156651 4159389 D PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; P-type ATPase, translocating 4156651..4159389 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793156 YP_005201826.1 CDS Rahaq2_3906 NC_016818.1 4159711 4160391 D PFAM: Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 4159711..4160391 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793157 YP_005201827.1 CDS Rahaq2_3907 NC_016818.1 4160502 4162262 D PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; ChvD family ATP-binding protein 4160502..4162262 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793158 YP_005201828.1 CDS Rahaq2_3908 NC_016818.1 4162327 4163235 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4162327..4163235) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793159 YP_005201829.1 CDS Rahaq2_3909 NC_016818.1 4163335 4164336 D PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; zinc-binding alcohol dehydrogenase family protein 4163335..4164336 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793160 YP_005201830.1 CDS Rahaq2_3910 NC_016818.1 4164419 4165276 R PFAM: Protein of unknown function (DUF2950); hypothetical protein complement(4164419..4165276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793161 YP_005201831.1 CDS Rahaq2_3911 NC_016818.1 4165294 4166841 R PFAM: Protein of unknown function (DUF3300); hypothetical protein complement(4165294..4166841) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793162 YP_005201832.1 CDS Rahaq2_3912 NC_016818.1 4167186 4168445 R PFAM: Helix-turn-helix; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain; nicotinamide-nucleotide adenylyltransferase, NadR type complement(4167186..4168445) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793163 YP_005201833.1 CDS Rahaq2_3913 NC_016818.1 4168518 4169900 R PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA complement(4168518..4169900) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793164 YP_005201834.1 CDS Rahaq2_3914 NC_016818.1 4169921 4170889 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB; phosphoserine phosphatase SerB complement(4169921..4170889) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793165 YP_005201835.1 CDS Rahaq2_3916 NC_016818.1 4171136 4171924 D PFAM: Bacterial virulence factor haemolysin; putative membrane protein affecting hemolysin expression 4171136..4171924 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793167 YP_005201836.1 CDS Rahaq2_3917 NC_016818.1 4171926 4173272 R PFAM: Bacterial regulatory protein, arsR family; HipA-like N-terminal domain; regulatory protein, arsR family/HipA-like N-terminal domain protein complement(4171926..4173272) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793168 YP_005201837.1 CDS Rahaq2_3918 NC_016818.1 4173469 4174188 R PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); purine-nucleoside phosphorylase, DeoD family complement(4173469..4174188) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793169 YP_005201838.1 CDS Rahaq2_3919 NC_016818.1 4174272 4175495 R PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase; phosphopentomutase complement(4174272..4175495) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794234 YP_005201839.1 CDS Rahaq2_3920 NC_016818.1 4175584 4176912 R PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; thymidine phosphorylase complement(4175584..4176912) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793170 YP_005201840.1 CDS Rahaq2_3921 NC_016818.1 4177003 4177782 R PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase complement(4177003..4177782) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794235 YP_005201841.1 CDS Rahaq2_3922 NC_016818.1 4177838 4177999 D hypothetical protein 4177838..4177999 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793171 YP_005201842.1 CDS Rahaq2_3923 NC_016818.1 4178331 4179116 R PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; Mg-dependent DNase complement(4178331..4179116) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793172 YP_005201843.1 CDS Rahaq2_3924 NC_016818.1 4179113 4180483 R PFAM: Patatin-like phospholipase; putative esterase of the alpha-beta hydrolase superfamily complement(4179113..4180483) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793173 YP_005201844.1 CDS Rahaq2_3926 NC_016818.1 4181038 4181631 R PFAM: Putative phospholipid-binding domain; putative periplasmic or secreted lipoprotein complement(4181038..4181631) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793175 YP_005201845.1 CDS Rahaq2_3927 NC_016818.1 4181802 4182014 R hypothetical protein complement(4181802..4182014) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793176 YP_005201846.1 CDS Rahaq2_3928 NC_016818.1 4182056 4184611 R PFAM: Carbohydrate binding domain; putative carbohydrate binding protein complement(4182056..4184611) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793177 YP_005201847.1 CDS Rahaq2_3929 NC_016818.1 4185023 4186612 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 complement(4185023..4186612) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793178 YP_005201848.1 CDS Rahaq2_3930 NC_016818.1 4186773 4188032 R PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain; HipA domain-containing protein complement(4186773..4188032) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793179 YP_005201849.1 CDS Rahaq2_3931 NC_016818.1 4188035 4188358 R PFAM: Helix-turn-helix; putative transcriptional regulator with C-terminal CBS domains complement(4188035..4188358) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793180 YP_005201850.1 CDS Rahaq2_3932 NC_016818.1 4188522 4188965 R PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(4188522..4188965) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793181 YP_005201851.1 CDS Rahaq2_3933 NC_016818.1 4188934 4189347 R PFAM: DNA polymerase III psi subunit; TIGRFAM: DNA polymerase III, psi subunit; DNA polymerase III subunit psi complement(4188934..4189347) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793182 YP_005201852.1 CDS Rahaq2_3934 NC_016818.1 4189487 4190533 D PFAM: Methyltransferase small domain; Methyltransferase small domain N-terminal; 16S RNA G1207 methylase RsmC 4189487..4190533 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794236 YP_005201853.1 CDS Rahaq2_3935 NC_016818.1 4190538 4191530 R PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein complement(4190538..4191530) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793183 YP_005201854.1 CDS Rahaq2_3936 NC_016818.1 4191656 4192594 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 4191656..4192594 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793184 YP_005201855.1 CDS Rahaq2_3940 NC_016818.1 4193239 4193523 R PFAM: Protein of unknown function (DUF1435); hypothetical protein complement(4193239..4193523) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793188 YP_005201856.1 CDS Rahaq2_3941 NC_016818.1 4193826 4194920 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 4193826..4194920 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793189 YP_005201857.1 CDS Rahaq2_3942 NC_016818.1 4195523 4196557 D PFAM: L-rhamnose-proton symport protein (RhaT); TIGRFAM: RhaT L-rhamnose-proton symporter family protein; L-rhamnose-proton symport protein (RhaT) 4195523..4196557 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793190 YP_005201858.1 CDS Rahaq2_3943 NC_016818.1 4196586 4197458 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain complement(4196586..4197458) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793191 YP_005201859.1 CDS Rahaq2_3944 NC_016818.1 4197543 4198370 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; DNA-binding domain-containing protein complement(4197543..4198370) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793192 YP_005201860.1 CDS Rahaq2_3945 NC_016818.1 4198710 4200194 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase; rhamnulokinase 4198710..4200194 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793193 YP_005201861.1 CDS Rahaq2_3946 NC_016818.1 4200191 4201447 D PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase; L-rhamnose isomerase 4200191..4201447 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793194 YP_005201862.1 CDS Rahaq2_3947 NC_016818.1 4201500 4202324 D PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: rhamnulose-1-phosphate aldolase; rhamnulose-1-phosphate aldolase 4201500..4202324 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794237 YP_005201863.1 CDS Rahaq2_3948 NC_016818.1 4202460 4203608 D PFAM: Iron-containing alcohol dehydrogenase; TIGRFAM: lactaldehyde reductase; lactaldehyde reductase 4202460..4203608 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793195 YP_005201864.1 CDS Rahaq2_3949 NC_016818.1 4203733 4204047 D PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase; L-rhamnose 1-epimerase 4203733..4204047 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793196 YP_005201865.1 CDS Rahaq2_3950 NC_016818.1 4204022 4206196 R PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; radical SAM protein YgiQ complement(4204022..4206196) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793197 YP_005201866.1 CDS Rahaq2_3951 NC_016818.1 4206602 4208101 D PFAM: Sulfate transporter family; sulfate permease 4206602..4208101 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793198 YP_005201867.1 CDS Rahaq2_3952 NC_016818.1 4208174 4209826 R PFAM: DAK2 domain; Dak1 domain; TIGRFAM: dihydroxyacetone kinase, ATP-dependent; dihydroxyacetone kinase complement(4208174..4209826) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793199 YP_005201868.1 CDS Rahaq2_3953 NC_016818.1 4209980 4211347 R PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; iron-sulfur-dependent L-serine dehydratase complement(4209980..4211347) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793200 YP_005201869.1 CDS Rahaq2_3954 NC_016818.1 4211450 4212733 R PFAM: Tryptophan/tyrosine permease family; TIGRFAM: serine transporter; serine transporter complement(4211450..4212733) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793201 YP_005201870.1 CDS Rahaq2_3955 NC_016818.1 4213208 4213906 D hypothetical protein 4213208..4213906 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793202 YP_005201871.1 CDS Rahaq2_3956 NC_016818.1 4213909 4215189 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 4213909..4215189 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793203 YP_005201872.1 CDS Rahaq2_3957 NC_016818.1 4215205 4215702 D PFAM: OmpA family; outer membrane protein/peptidoglycan-associated (lipo)protein 4215205..4215702 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794238 YP_005201873.1 CDS Rahaq2_3958 NC_016818.1 4215836 4219447 D hypothetical protein 4215836..4219447 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793204 YP_005201874.1 CDS Rahaq2_3959 NC_016818.1 4219453 4220325 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4219453..4220325) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793205 YP_005201875.1 CDS Rahaq2_3960 NC_016818.1 4220428 4221210 D PFAM: Alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 4220428..4221210 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794239 YP_005201876.1 CDS Rahaq2_3961 NC_016818.1 4221238 4222914 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, catabolic; acetolactate synthase, catabolic 4221238..4222914 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793206 YP_005201877.1 CDS Rahaq2_3962 NC_016818.1 4223137 4224561 D PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); DNA-methyltransferase Dcm 4223137..4224561 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793207 YP_005201878.1 CDS Rahaq2_3963 NC_016818.1 4224567 4225037 D PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; DNA mismatch endonuclease Vsr 4224567..4225037 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793208 YP_005201879.1 CDS Rahaq2_3964 NC_016818.1 4225058 4226275 R PFAM: EcoRII C terminal; Restriction endonuclease EcoRII, N-terminal; C terminal/Restriction endonuclease N-terminal complement(4225058..4226275) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793209 YP_005201880.1 CDS Rahaq2_3965 NC_016818.1 4226534 4226650 D hypothetical protein 4226534..4226650 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793210 YP_005201881.1 CDS Rahaq2_3966 NC_016818.1 4226746 4226967 D hypothetical protein 4226746..4226967 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793211 YP_005201882.1 CDS Rahaq2_3967 NC_016818.1 4227094 4227552 R PFAM: Transposase IS200 like; transposase complement(4227094..4227552) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793212 YP_005201883.1 CDS Rahaq2_3969 NC_016818.1 4227746 4228882 R hypothetical protein complement(4227746..4228882) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794240 YP_005201884.1 CDS Rahaq2_3970 NC_016818.1 4229513 4229848 D hypothetical protein 4229513..4229848 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793214 YP_005201885.1 CDS Rahaq2_3971 NC_016818.1 4229826 4230746 R PFAM: alpha/beta hydrolase fold; esterase/lipase complement(4229826..4230746) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793215 YP_005201886.1 CDS Rahaq2_3972 NC_016818.1 4230924 4231175 R hypothetical protein complement(4230924..4231175) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794241 YP_005201887.1 CDS Rahaq2_3973 NC_016818.1 4231394 4232116 D hypothetical protein 4231394..4232116 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793216 YP_005201888.1 CDS Rahaq2_3974 NC_016818.1 4232119 4232745 D hypothetical protein 4232119..4232745 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793217 YP_005201889.1 CDS Rahaq2_3975 NC_016818.1 4232892 4233764 D putative restriction endonuclease 4232892..4233764 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794242 YP_005201890.1 CDS Rahaq2_3976 NC_016818.1 4234292 4234921 R hypothetical protein complement(4234292..4234921) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793218 YP_005201891.1 CDS Rahaq2_3977 NC_016818.1 4235357 4236157 D hypothetical protein 4235357..4236157 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793219 YP_005201892.1 CDS Rahaq2_3978 NC_016818.1 4236189 4237250 R hypothetical protein complement(4236189..4237250) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793220 YP_005201893.1 CDS Rahaq2_3979 NC_016818.1 4237252 4237665 R hypothetical protein complement(4237252..4237665) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793221 YP_005201894.1 CDS Rahaq2_3980 NC_016818.1 4238050 4238229 R hypothetical protein complement(4238050..4238229) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793222 YP_005201895.1 CDS Rahaq2_3981 NC_016818.1 4238534 4238710 R PFAM: Ogr/Delta-like zinc finger; For manual analysis, pseudo, good start found, extended gene length<=100aa and < 90% the length of the second longest homolog. Found common hit with non- adjoining gene: Rahaq2_00007330; manually curated; Ogr/Delta-like zinc finger complement(4238534..4238710) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793223 YP_005201896.1 CDS Rahaq2_3983 NC_016818.1 4239496 4240692 D PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C 4239496..4240692 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793225 YP_005201897.1 CDS Rahaq2_3984 NC_016818.1 4240772 4241842 R PFAM: Predicted permease YjgP/YjgQ family; putative permease complement(4240772..4241842) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793226 YP_005201898.1 CDS Rahaq2_3985 NC_016818.1 4241842 4242936 R PFAM: Predicted permease YjgP/YjgQ family; putative permease complement(4241842..4242936) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793227 YP_005201899.1 CDS Rahaq2_3986 NC_016818.1 4243216 4244727 D PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; leucyl aminopeptidase 4243216..4244727 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793228 YP_005201900.1 CDS Rahaq2_3987 NC_016818.1 4244844 4245329 D PFAM: DNA polymerase III chi subunit, HolC; DNA polymerase III subunit chi 4244844..4245329 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793229 YP_005201901.1 CDS Rahaq2_3988 NC_016818.1 4245322 4248177 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 4245322..4248177 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793230 YP_005201902.1 CDS Rahaq2_3989 NC_016818.1 4248263 4249279 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4248263..4249279) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793231 YP_005201903.1 CDS Rahaq2_3990 NC_016818.1 4249897 4250400 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 4249897..4250400 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793232 YP_005201904.1 CDS Rahaq2_3991 NC_016818.1 4250445 4251185 D PFAM: Helix-turn-helix domain, rpiR family; SIS domain; transcriptional regulator 4250445..4251185 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793233 YP_005201905.1 CDS Rahaq2_3992 NC_016818.1 4251333 4252865 D PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component 4251333..4252865 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793234 YP_005201906.1 CDS Rahaq2_3993 NC_016818.1 4252930 4254363 D PFAM: Glycosyl hydrolase family 1; beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase 4252930..4254363 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793235 YP_005201907.1 CDS Rahaq2_3994 NC_016818.1 4254402 4255961 R PFAM: Glycosyl hydrolases family 43; beta-xylosidase complement(4254402..4255961) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793236 YP_005201908.1 CDS Rahaq2_3995 NC_016818.1 4255975 4257405 R PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter complement(4255975..4257405) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793237 YP_005201909.1 CDS Rahaq2_3996 NC_016818.1 4257605 4258030 R PFAM: Protein of unknown function (DUF1260); hypothetical protein complement(4257605..4258030) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793238 YP_005201910.1 CDS Rahaq2_3997 NC_016818.1 4258199 4259206 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 4258199..4259206 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794243 YP_005201911.1 CDS Rahaq2_3998 NC_016818.1 4259368 4261170 D PFAM: Alpha amylase, catalytic domain; glycosidase 4259368..4261170 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793239 YP_005201912.1 CDS Rahaq2_3999 NC_016818.1 4261151 4261621 R PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family; hypothetical protein complement(4261151..4261621) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793240 YP_005201913.1 CDS Rahaq2_4000 NC_016818.1 4261767 4262015 D hypothetical protein 4261767..4262015 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793241 YP_005201914.1 CDS Rahaq2_4001 NC_016818.1 4262309 4263529 D PFAM: Amidinotransferase; TIGRFAM: arginine deiminase; arginine deiminase 4262309..4263529 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793242 YP_005201915.1 CDS Rahaq2_4002 NC_016818.1 4263552 4264463 D PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase; carbamate kinase 4263552..4264463 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793243 YP_005201916.1 CDS Rahaq2_4003 NC_016818.1 4264500 4265507 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 4264500..4265507 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793244 YP_005201917.1 CDS Rahaq2_4004 NC_016818.1 4265560 4266963 D PFAM: C4-dicarboxylate anaerobic carrier; hypothetical protein 4265560..4266963 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793245 YP_005201918.1 CDS Rahaq2_4005 NC_016818.1 4267025 4267531 D PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor; arginine repressor 4267025..4267531 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793246 YP_005201919.1 CDS Rahaq2_4006 NC_016818.1 4267598 4267711 D hypothetical protein 4267598..4267711 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793247 YP_005201920.1 CDS Rahaq2_4007 NC_016818.1 4267777 4268712 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 4267777..4268712 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793248 YP_005201921.1 CDS Rahaq2_4008 NC_016818.1 4268732 4269196 D PFAM: Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; aspartate carbamoyltransferase, regulatory subunit 4268732..4269196 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793249 YP_005201922.1 CDS Rahaq2_4009 NC_016818.1 4269252 4269638 D PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP 4269252..4269638 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793250 YP_005201923.1 CDS Rahaq2_4010 NC_016818.1 4269746 4270777 R hypothetical protein complement(4269746..4270777) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794244 YP_005201924.1 CDS Rahaq2_4011 NC_016818.1 4270866 4271921 R hypothetical protein complement(4270866..4271921) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793251 YP_005201925.1 CDS Rahaq2_4012 NC_016818.1 4272011 4273060 R hypothetical protein complement(4272011..4273060) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793252 YP_005201926.1 CDS Rahaq2_4013 NC_016818.1 4273060 4274520 R hypothetical protein complement(4273060..4274520) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794245 YP_005201927.1 CDS Rahaq2_4014 NC_016818.1 4274536 4277031 R PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; Rhs element Vgr protein complement(4274536..4277031) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793253 YP_005201928.1 CDS Rahaq2_4015 NC_016818.1 4277426 4278877 D PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404); hypothetical protein 4277426..4278877 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793254 YP_005201929.1 CDS Rahaq2_4016 NC_016818.1 4278871 4279812 D PFAM: Bacterial domain of unknown function (DUF403); hypothetical protein 4278871..4279812 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794246 YP_005201930.1 CDS Rahaq2_4017 NC_016818.1 4279812 4280606 D PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region; transglutaminase 4279812..4280606 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793255 YP_005201931.1 CDS Rahaq2_4018 NC_016818.1 4280633 4281364 D PFAM: Proteasome subunit; putative proteasome-type protease 4280633..4281364 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793256 YP_005201932.1 CDS Rahaq2_4019 NC_016818.1 4281464 4282495 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 4281464..4282495 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793257 YP_005201933.1 CDS Rahaq2_4020 NC_016818.1 4282542 4283552 R PFAM: Outer membrane protein G (OmpG); Outer membrane protein G (OmpG) complement(4282542..4283552) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793258 YP_005201934.1 CDS Rahaq2_4021 NC_016818.1 4283652 4284740 R PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATPase complement(4283652..4284740) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793259 YP_005201935.1 CDS Rahaq2_4022 NC_016818.1 4284750 4285433 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase; beta-phosphoglucomutase complement(4284750..4285433) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793260 YP_005201936.1 CDS Rahaq2_4023 NC_016818.1 4285423 4287669 R PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; trehalose/maltose hydrolase or phosphorylase complement(4285423..4287669) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793261 YP_005201937.1 CDS Rahaq2_4024 NC_016818.1 4287666 4288724 R PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase complement(4287666..4288724) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793262 YP_005201938.1 CDS Rahaq2_4025 NC_016818.1 4288740 4289531 R PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase complement(4288740..4289531) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793263 YP_005201939.1 CDS Rahaq2_4026 NC_016818.1 4289544 4290596 R PFAM: Zinc-binding dehydrogenase; theronine dehydrogenase-like Zn-dependent dehydrogenase complement(4289544..4290596) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793264 YP_005201940.1 CDS Rahaq2_4027 NC_016818.1 4290641 4291486 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(4290641..4291486) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793265 YP_005201941.1 CDS Rahaq2_4028 NC_016818.1 4291473 4292354 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(4291473..4292354) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793266 YP_005201942.1 CDS Rahaq2_4029 NC_016818.1 4292385 4293689 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(4292385..4293689) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793267 YP_005201943.1 CDS Rahaq2_4030 NC_016818.1 4293783 4295462 R PFAM: Alpha amylase, catalytic domain; glycosidase complement(4293783..4295462) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794247 YP_005201944.1 CDS Rahaq2_4031 NC_016818.1 4295652 4296206 R PFAM: Bacterial inner membrane protein; inner membrane protein complement(4295652..4296206) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793268 YP_005201945.1 CDS Rahaq2_4032 NC_016818.1 4296303 4297793 R PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; altronate dehydratase complement(4296303..4297793) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793269 YP_005201946.1 CDS Rahaq2_4033 NC_016818.1 4297804 4299255 R PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; mannitol-1-phosphate/altronate dehydrogenase complement(4297804..4299255) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794248 YP_005201947.1 CDS Rahaq2_4034 NC_016818.1 4299399 4300811 R PFAM: Glucuronate isomerase; glucuronate isomerase complement(4299399..4300811) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793270 YP_005201948.1 CDS Rahaq2_4035 NC_016818.1 4300852 4301013 D hypothetical protein 4300852..4301013 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793271 YP_005201949.1 CDS Rahaq2_4036 NC_016818.1 4301796 4303088 D PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter; D-galactonate transporter 4301796..4303088 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794249 YP_005201950.1 CDS Rahaq2_4037 NC_016818.1 4303279 4304055 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 4303279..4304055 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793272 YP_005201951.1 CDS Rahaq2_4038 NC_016818.1 4304439 4305122 D PFAM: SNARE associated Golgi protein; putative membrane-associated protein 4304439..4305122 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793273 YP_005201952.1 CDS Rahaq2_4039 NC_016818.1 4305119 4305499 D hypothetical protein 4305119..4305499 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793274 YP_005201953.1 CDS Rahaq2_4040 NC_016818.1 4305634 4306011 D PFAM: Protein of unknown function (DUF1090); hypothetical protein 4305634..4306011 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793275 YP_005201954.1 CDS Rahaq2_4041 NC_016818.1 4306159 4306461 D PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein 4306159..4306461 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793276 YP_005201955.1 CDS Rahaq2_4042 NC_016818.1 4306464 4306871 D PFAM: Protein of unknown function (DUF1469); hypothetical protein 4306464..4306871 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793277 YP_005201956.1 CDS Rahaq2_4043 NC_016818.1 4306868 4307152 D hypothetical protein 4306868..4307152 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793278 YP_005201957.1 CDS Rahaq2_4044 NC_016818.1 4307392 4307784 D PFAM: DoxX; hypothetical protein 4307392..4307784 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793279 YP_005201958.1 CDS Rahaq2_4046 NC_016818.1 4308032 4309015 D PFAM: Glutathione S-transferase, C-terminal domain; putative glutathione S-transferase 4308032..4309015 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793281 YP_005201959.1 CDS Rahaq2_4047 NC_016818.1 4309057 4309962 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4309057..4309962) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793282 YP_005201960.1 CDS Rahaq2_4048 NC_016818.1 4310073 4310777 D PFAM: Pirin; Pirin-like protein 4310073..4310777 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793283 YP_005201961.1 CDS Rahaq2_4050 NC_016818.1 4311355 4312224 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; putative S-adenosylmethionine-dependent methyltransferase complement(4311355..4312224) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793285 YP_005201962.1 CDS Rahaq2_4051 NC_016818.1 4312286 4314322 D PFAM: LppC putative lipoprotein; putative lipoprotein 4312286..4314322 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793286 YP_005201963.1 CDS Rahaq2_4052 NC_016818.1 4314388 4314756 D PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; hypothetical protein 4314388..4314756 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794250 YP_005201964.1 CDS Rahaq2_4053 NC_016818.1 4314787 4315377 D PFAM: SIS domain; phosphoheptose isomerase 4314787..4315377 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793287 YP_005201965.1 CDS Rahaq2_4054 NC_016818.1 4315387 4315962 D PFAM: Putative phospholipid-binding domain; putative periplasmic or secreted lipoprotein 4315387..4315962 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793288 YP_005201966.1 CDS Rahaq2_4055 NC_016818.1 4316027 4316749 R PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase complement(4316027..4316749) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794251 YP_005201967.1 CDS Rahaq2_4057 NC_016818.1 4317646 4319985 R PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; PAS domain-containing protein complement(4317646..4319985) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793290 YP_005201968.1 CDS Rahaq2_4058 NC_016818.1 4320858 4325315 D PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase family protein 4320858..4325315 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793291 YP_005201969.1 CDS Rahaq2_4059 NC_016818.1 4325325 4326743 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthase small subunit family protein 4325325..4326743 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793292 YP_005201970.1 CDS Rahaq2_4060 NC_016818.1 4326932 4327435 R PFAM: Stringent starvation protein B; stringent starvation protein B complement(4326932..4327435) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793293 YP_005201971.1 CDS Rahaq2_4061 NC_016818.1 4327439 4328080 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase complement(4327439..4328080) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793294 YP_005201972.1 CDS Rahaq2_4062 NC_016818.1 4328415 4328807 R PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 complement(4328415..4328807) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793295 YP_005201973.1 CDS Rahaq2_4063 NC_016818.1 4328824 4329252 R PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 complement(4328824..4329252) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793296 YP_005201974.1 CDS Rahaq2_4064 NC_016818.1 4329572 4330711 R PFAM: AFG1-like ATPase; putative ATPase complement(4329572..4330711) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793297 YP_005201975.1 CDS Rahaq2_4065 NC_016818.1 4330997 4331398 D PFAM: Protein of unknown function (DUF1043); hypothetical protein 4330997..4331398 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793298 YP_005201976.1 CDS Rahaq2_4066 NC_016818.1 4331553 4332920 D PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; periplasmic serine protease, Do/DeqQ family 4331553..4332920 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793299 YP_005201977.1 CDS Rahaq2_4067 NC_016818.1 4332942 4334075 D PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine pepetdase DegS; periplasmic serine pepetdase DegS 4332942..4334075 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793300 YP_005201978.1 CDS Rahaq2_4068 NC_016818.1 4334152 4335411 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4334152..4335411) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793301 YP_005201979.1 CDS Rahaq2_4069 NC_016818.1 4335479 4335733 R PFAM: BolA-like protein; BolA superfamily transcriptional regulator complement(4335479..4335733) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793302 YP_005201980.1 CDS Rahaq2_4070 NC_016818.1 4335902 4336216 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; putative NTP binding protein (contains STAS domain) complement(4335902..4336216) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793303 YP_005201981.1 CDS Rahaq2_4071 NC_016818.1 4336213 4336848 R PFAM: Toluene tolerance, Ttg2; organic solvent resistance ABC transporter auxiliary protein complement(4336213..4336848) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793304 YP_005201982.1 CDS Rahaq2_4072 NC_016818.1 4336890 4337450 R PFAM: mce related protein; organic solvent resistance ABC transporter periplasmic protein complement(4336890..4337450) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793305 YP_005201983.1 CDS Rahaq2_4073 NC_016818.1 4337454 4338236 R PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein complement(4337454..4338236) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794252 YP_005201984.1 CDS Rahaq2_4074 NC_016818.1 4338252 4339055 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; ABC-type transport system involved in resistance to organic solvents, ATPase component complement(4338252..4339055) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793306 YP_005201985.1 CDS Rahaq2_4075 NC_016818.1 4339363 4340340 D PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; K+dependent Na+ exchanger related-protein 4339363..4340340 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793307 YP_005201986.1 CDS Rahaq2_4076 NC_016818.1 4340360 4341346 D PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; KpsF/GutQ family protein 4340360..4341346 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794253 YP_005201987.1 CDS Rahaq2_4077 NC_016818.1 4341363 4341929 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4341363..4341929 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793308 YP_005201988.1 CDS Rahaq2_4078 NC_016818.1 4341926 4342495 D PFAM: Protein of unknown function (DUF1239); hypothetical protein 4341926..4342495 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793309 YP_005201989.1 CDS Rahaq2_4079 NC_016818.1 4342473 4343030 D PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; autotransporter-associated beta strand repeat; lipopolysaccharide transport periplasmic protein LptA 4342473..4343030 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793310 YP_005201990.1 CDS Rahaq2_4080 NC_016818.1 4343037 4343762 D PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; ABC transporter ATPase 4343037..4343762 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793311 YP_005201991.1 CDS Rahaq2_4081 NC_016818.1 4343864 4345297 D PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma-54 factor 4343864..4345297 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793312 YP_005201992.1 CDS Rahaq2_4082 NC_016818.1 4345321 4345608 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosomal subunit interface protein 4345321..4345608 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794254 YP_005201993.1 CDS Rahaq2_4083 NC_016818.1 4345719 4346189 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 4345719..4346189 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793313 YP_005201994.1 CDS Rahaq2_4084 NC_016818.1 4346246 4347100 D PFAM: P-loop ATPase protein family; putative P-loop-containing kinase 4346246..4347100 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793314 YP_005201995.1 CDS Rahaq2_4085 NC_016818.1 4347097 4347369 D PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system HPr (HPr) family protein 4347097..4347369 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794255 YP_005201996.1 CDS Rahaq2_4086 NC_016818.1 4347395 4349314 R PFAM: HTH domain; Mga helix-turn-helix domain; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; transcriptional antiterminator complement(4347395..4349314) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793315 YP_005201997.1 CDS Rahaq2_4088 NC_016818.1 4349532 4350272 R PFAM: Protein of unknown function (DUF1341); TIGRFAM: conserved hypothetical protein EF_0839/AHA_3917; hypothetical protein complement(4349532..4350272) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794256 YP_005201998.1 CDS Rahaq2_4089 NC_016818.1 4350269 4351396 R PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; putative pyridoxal phosphate-dependent enzyme complement(4350269..4351396) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793317 YP_005201999.1 CDS Rahaq2_4090 NC_016818.1 4351386 4352519 R PFAM: Amidohydrolase family; TIGRFAM: probable amidohydrolase EF_0837/AHA_3915; putative amidohydrolase complement(4351386..4352519) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793318 YP_005202000.1 CDS Rahaq2_4091 NC_016818.1 4352589 4353236 R TIGRFAM: conserved hypothetical protein EF_0833/AHA_3914; hypothetical protein complement(4352589..4353236) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793319 YP_005202001.1 CDS Rahaq2_4092 NC_016818.1 4353249 4354025 R TIGRFAM: conserved hypothetical protein EF_0832/AHA_3913; hypothetical protein complement(4353249..4354025) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793320 YP_005202002.1 CDS Rahaq2_4093 NC_016818.1 4354058 4354357 R TIGRFAM: conserved hypothetical protein EF_0831/AHA_3912; hypothetical protein complement(4354058..4354357) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793321 YP_005202003.1 CDS Rahaq2_4094 NC_016818.1 4354357 4354722 R TIGRFAM: conserved hypothetical protein EF_0830/AHA_3911; hypothetical protein complement(4354357..4354722) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793322 YP_005202004.1 CDS Rahaq2_4095 NC_016818.1 4354758 4355108 R PFAM: PRD domain; TIGRFAM: PRD domain protein EF_0829/AHA_3910; PRD domain-containing protein complement(4354758..4355108) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793323 YP_005202005.1 CDS Rahaq2_4096 NC_016818.1 4355508 4355918 D PFAM: Transcription elongation factor, GreA/GreB, C-term; transcription elongation factor 4355508..4355918 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793324 YP_005202006.1 CDS Rahaq2_4097 NC_016818.1 4356474 4356866 D hypothetical protein 4356474..4356866 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793325 YP_005202007.1 CDS Rahaq2_4098 NC_016818.1 4356863 4357069 D putative transcriptional regulator 4356863..4357069 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793326 YP_005202008.1 CDS Rahaq2_4099 NC_016818.1 4357382 4357768 R PFAM: Cytochrome b562; soluble cytochrome b562 complement(4357382..4357768) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793327 YP_005202009.1 CDS Rahaq2_4100 NC_016818.1 4357916 4359256 R PFAM: Putative modulator of DNA gyrase; putative Zn-dependent protease-like protein complement(4357916..4359256) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793328 YP_005202010.1 CDS Rahaq2_4101 NC_016818.1 4359483 4360034 D PFAM: Protein of unknown function (DUF615); hypothetical protein 4359483..4360034 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793329 YP_005202011.1 CDS Rahaq2_4102 NC_016818.1 4360087 4360380 R PFAM: Barstar (barnase inhibitor); Barstar, RNAse (barnase) inhibitor complement(4360087..4360380) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793330 YP_005202012.1 CDS Rahaq2_4103 NC_016818.1 4360386 4360835 R PFAM: ribonuclease; guanyl-specific ribonuclease Sa complement(4360386..4360835) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793331 YP_005202013.1 CDS Rahaq2_4104 NC_016818.1 4360914 4362374 R PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(4360914..4362374) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793332 YP_005202014.1 CDS Rahaq2_4105 NC_016818.1 4362788 4364386 D PFAM: Amino acid permease; amino acid transporter 4362788..4364386 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793333 YP_005202015.1 CDS Rahaq2_4107 NC_016818.1 4364798 4366756 R PFAM: Fusaric acid resistance protein family; hypothetical protein complement(4364798..4366756) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793334 YP_005202016.1 CDS Rahaq2_4108 NC_016818.1 4366767 4367702 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit complement(4366767..4367702) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793335 YP_005202017.1 CDS Rahaq2_4109 NC_016818.1 4367710 4367913 R PFAM: Protein of unknown function (DUF1656); hypothetical protein complement(4367710..4367913) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794258 YP_005202018.1 CDS Rahaq2_4110 NC_016818.1 4368187 4369125 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 4368187..4369125 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793336 YP_005202019.1 CDS Rahaq2_4111 NC_016818.1 4369172 4370617 R PFAM: Putative modulator of DNA gyrase; putative Zn-dependent protease-like protein complement(4369172..4370617) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793337 YP_005202020.1 CDS Rahaq2_4112 NC_016818.1 4370760 4374587 R TIGRFAM: TIGR02099 family protein; hypothetical protein complement(4370760..4374587) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793338 YP_005202021.1 CDS Rahaq2_4113 NC_016818.1 4374686 4376155 R PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease, Rne/Rng family complement(4374686..4376155) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793339 YP_005202022.1 CDS Rahaq2_4114 NC_016818.1 4376145 4376738 R PFAM: Maf-like protein; TIGRFAM: MAF protein; MAF protein complement(4376145..4376738) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793340 YP_005202023.1 CDS Rahaq2_4115 NC_016818.1 4376746 4377234 R PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; rod shape-determining protein MreD complement(4376746..4377234) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793341 YP_005202024.1 CDS Rahaq2_4116 NC_016818.1 4377231 4378238 R PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; rod shape-determining protein MreC complement(4377231..4378238) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793342 YP_005202025.1 CDS Rahaq2_4117 NC_016818.1 4378494 4379537 R PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; MreB/Mrl family cell shape determining protein complement(4378494..4379537) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793343 YP_005202026.1 CDS Rahaq2_4118 NC_016818.1 4379893 4381827 R PFAM: EAL domain; GGDEF domain; EAL domain-containing protein complement(4379893..4381827) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793344 YP_005202027.1 CDS Rahaq2_4119 NC_016818.1 4382144 4383145 D PFAM: Oxidoreductase molybdopterin binding domain; sulfite oxidase-like oxidoreductase 4382144..4383145 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793345 YP_005202028.1 CDS Rahaq2_4120 NC_016818.1 4383164 4383766 D PFAM: Ferric reductase like transmembrane component; hypothetical protein 4383164..4383766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793346 YP_005202029.1 CDS Rahaq2_4121 NC_016818.1 4384008 4384460 D PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 4384008..4384460 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793347 YP_005202030.1 CDS Rahaq2_4122 NC_016818.1 4384493 4384957 D PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4384493..4384957 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793348 YP_005202031.1 CDS Rahaq2_4123 NC_016818.1 4384969 4386318 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; acetyl-CoA carboxylase, biotin carboxylase subunit 4384969..4386318 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793349 YP_005202032.1 CDS Rahaq2_4124 NC_016818.1 4386483 4388426 D hypothetical protein 4386483..4388426 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793350 YP_005202033.1 CDS Rahaq2_4125 NC_016818.1 4388524 4388766 D PFAM: Protein of unknown function (DUF997); hypothetical protein 4388524..4388766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793351 YP_005202034.1 CDS Rahaq2_4126 NC_016818.1 4388756 4390201 D PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; sodium/pantothenate symporter; sodium/pantothenate symporter 4388756..4390201 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794259 YP_005202035.1 CDS Rahaq2_4127 NC_016818.1 4390245 4391129 D PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 4390245..4391129 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793352 YP_005202036.1 CDS Rahaq2_4128 NC_016818.1 4391277 4392032 D PFAM: Eukaryotic-type carbonic anhydrase; carbonic anhydrase 4391277..4392032 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793353 YP_005202037.1 CDS Rahaq2_4129 NC_016818.1 4392421 4393386 D PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; putative TIM-barrel protein, nifR3 family 4392421..4393386 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794260 YP_005202038.1 CDS Rahaq2_4130 NC_016818.1 4393408 4393704 D PFAM: Bacterial regulatory protein, Fis family; transcriptional activator Fis 4393408..4393704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793354 YP_005202039.1 CDS Rahaq2_4131 NC_016818.1 4393905 4394333 D PFAM: DoxX; hypothetical protein 4393905..4394333 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793355 YP_005202040.1 CDS Rahaq2_4132 NC_016818.1 4394754 4395674 D PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase 4394754..4395674 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794261 YP_005202041.1 CDS Rahaq2_4133 NC_016818.1 4395762 4395947 D hypothetical protein 4395762..4395947 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793356 YP_005202042.1 CDS Rahaq2_4134 NC_016818.1 4396355 4397380 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 4396355..4397380 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793357 YP_005202043.1 CDS Rahaq2_4135 NC_016818.1 4397485 4398663 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 4397485..4398663 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793358 YP_005202044.1 CDS Rahaq2_4136 NC_016818.1 4398679 4399782 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter permease 4398679..4399782 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793359 YP_005202045.1 CDS Rahaq2_4137 NC_016818.1 4399791 4400552 D PFAM: ABC transporter; polar amino acid ABC transporter ATPase 4399791..4400552 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793360 YP_005202046.1 CDS Rahaq2_4138 NC_016818.1 4400739 4401428 R PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; putative effector of murein hydrolase complement(4400739..4401428) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793361 YP_005202047.1 CDS Rahaq2_4139 NC_016818.1 4401421 4401843 R PFAM: LrgA family; putative effector of murein hydrolase LrgA complement(4401421..4401843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793362 YP_005202048.1 CDS Rahaq2_4140 NC_016818.1 4401988 4402866 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 4401988..4402866 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793363 YP_005202049.1 CDS Rahaq2_4141 NC_016818.1 4402939 4404588 R PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form; Na+ antiporter complement(4402939..4404588) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793364 YP_005202050.1 CDS Rahaq2_4142 NC_016818.1 4404904 4406271 R PFAM: Permease family; permease complement(4404904..4406271) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793365 YP_005202051.1 CDS Rahaq2_4143 NC_016818.1 4406681 4407349 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase complement(4406681..4407349) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793366 YP_005202052.1 CDS Rahaq2_4144 NC_016818.1 4407619 4409712 D PFAM: EAL domain; GGDEF domain; Bacterial signalling protein N terminal repeat; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 4407619..4409712 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793367 YP_005202053.1 CDS Rahaq2_4145 NC_016818.1 4409723 4411285 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(4409723..4411285) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794262 YP_005202054.1 CDS Rahaq2_4146 NC_016818.1 4411521 4412324 R PFAM: Inositol monophosphatase family; inositol monophosphatase/fructose-1,6-bisphosphatase family protein complement(4411521..4412324) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793368 YP_005202055.1 CDS Rahaq2_4147 NC_016818.1 4412479 4413111 D PFAM: LysE type translocator; putative threonine efflux protein 4412479..4413111 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793369 YP_005202056.1 CDS Rahaq2_4148 NC_016818.1 4413193 4414281 D PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein 4413193..4414281 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794263 YP_005202057.1 CDS Rahaq2_4149 NC_016818.1 4414329 4415069 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 4414329..4415069 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793370 YP_005202058.1 CDS Rahaq2_4150 NC_016818.1 4415088 4415945 R PFAM: RIO1 family; serine/threonine protein kinase involved in cell cycle control complement(4415088..4415945) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793371 YP_005202059.1 CDS Rahaq2_4151 NC_016818.1 4416396 4417511 D PFAM: Male sterility protein; Male sterility protein 4416396..4417511 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794264 YP_005202060.1 CDS Rahaq2_4152 NC_016818.1 4417600 4418223 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase complement(4417600..4418223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793372 YP_005202061.1 CDS Rahaq2_4153 NC_016818.1 4418343 4419254 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain complement(4418343..4419254) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793373 YP_005202062.1 CDS Rahaq2_4154 NC_016818.1 4419408 4420313 D PFAM: EamA-like transporter family; DMT(drug/metabolite transporter) superfamily permease 4419408..4420313 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793374 YP_005202063.1 CDS Rahaq2_4155 NC_016818.1 4420430 4420810 D PFAM: Tautomerase enzyme; Tautomerase enzyme 4420430..4420810 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793375 YP_005202064.1 CDS Rahaq2_4156 NC_016818.1 4420832 4421176 R PFAM: PemK-like protein; growth inhibitor complement(4420832..4421176) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793376 YP_005202065.1 CDS Rahaq2_4157 NC_016818.1 4421176 4421424 R growth regulator complement(4421176..4421424) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793377 YP_005202066.1 CDS Rahaq2_4158 NC_016818.1 4421547 4422287 R PFAM: short chain dehydrogenase; dehydrogenase complement(4421547..4422287) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793378 YP_005202067.1 CDS Rahaq2_4159 NC_016818.1 4422409 4423311 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 4422409..4423311 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793379 YP_005202068.1 CDS Rahaq2_4160 NC_016818.1 4423367 4423858 D hypothetical protein 4423367..4423858 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793380 YP_005202069.1 CDS Rahaq2_4161 NC_016818.1 4423920 4425506 R hypothetical protein complement(4423920..4425506) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793381 YP_005202070.1 CDS Rahaq2_4162 NC_016818.1 4425634 4426791 R PFAM: FAD binding domain; 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase complement(4425634..4426791) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794265 YP_005202071.1 CDS Rahaq2_4163 NC_016818.1 4426981 4427661 R PFAM: Yersinia/Haemophilus virulence surface antigen; virulence surface antigen complement(4426981..4427661) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793382 YP_005202072.1 CDS Rahaq2_4164 NC_016818.1 4427866 4428720 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 4427866..4428720 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793383 YP_005202073.1 CDS Rahaq2_4165 NC_016818.1 4428834 4430234 D cytosine deaminase 4428834..4430234 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793384 YP_005202074.1 CDS Rahaq2_4166 NC_016818.1 4430323 4430865 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single stranded DNA-binding protein complement(4430323..4430865) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793385 YP_005202075.1 CDS Rahaq2_4167 NC_016818.1 4431193 4434048 D PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 4431193..4434048 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793386 YP_005202076.1 CDS Rahaq2_4168 NC_016818.1 4434099 4434854 R hypothetical protein complement(4434099..4434854) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794266 YP_005202077.1 CDS Rahaq2_4169 NC_016818.1 4434833 4435873 R hypothetical protein complement(4434833..4435873) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793387 YP_005202078.1 CDS Rahaq2_4170 NC_016818.1 4435953 4437134 R PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Putative esterase; enterochelin esterase-like enzyme complement(4435953..4437134) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793388 YP_005202079.1 CDS Rahaq2_4171 NC_016818.1 4437250 4438167 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4437250..4438167) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793389 YP_005202080.1 CDS Rahaq2_4172 NC_016818.1 4438269 4438889 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase 4438269..4438889 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793390 YP_005202081.1 CDS Rahaq2_4173 NC_016818.1 4438896 4439816 D PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4438896..4439816 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793391 YP_005202082.1 CDS Rahaq2_4174 NC_016818.1 4439798 4440151 R PFAM: Protein of unknown function (DUF419); hypothetical protein complement(4439798..4440151) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794267 YP_005202083.1 CDS Rahaq2_4175 NC_016818.1 4440148 4440573 R PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme complement(4440148..4440573) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793392 YP_005202084.1 CDS Rahaq2_4176 NC_016818.1 4440716 4442131 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter complement(4440716..4442131) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793393 YP_005202085.1 CDS Rahaq2_4177 NC_016818.1 4442178 4443563 R PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter complement(4442178..4443563) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793394 YP_005202086.1 CDS Rahaq2_4178 NC_016818.1 4443620 4445656 R PFAM: Glycosyl hydrolases family 31; family 31 glycosyl hydrolase, alpha-glucosidase complement(4443620..4445656) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793395 YP_005202087.1 CDS Rahaq2_4179 NC_016818.1 4445674 4446915 R PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); N-acyl-D-glucosamine 2-epimerase complement(4445674..4446915) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794268 YP_005202088.1 CDS Rahaq2_4180 NC_016818.1 4446931 4447809 R PFAM: DeoC/LacD family aldolase; tagatose-1,6-bisphosphate aldolase complement(4446931..4447809) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793396 YP_005202089.1 CDS Rahaq2_4181 NC_016818.1 4447832 4448728 R PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; beta-hydroxyacid dehydrogenase complement(4447832..4448728) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793397 YP_005202090.1 CDS Rahaq2_4182 NC_016818.1 4448901 4449797 D PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; sugar kinase 4448901..4449797 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793398 YP_005202091.1 CDS Rahaq2_4183 NC_016818.1 4449834 4450619 D PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator 4449834..4450619 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793399 YP_005202092.1 CDS Rahaq2_4184 NC_016818.1 4450784 4451977 R PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase complement(4450784..4451977) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793400 YP_005202093.1 CDS Rahaq2_4185 NC_016818.1 4452204 4452953 D PFAM: short chain dehydrogenase; dehydrogenase 4452204..4452953 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793401 YP_005202094.1 CDS Rahaq2_4186 NC_016818.1 4453032 4453664 R PFAM: Uncharacterized BCR, YitT family COG1284; hypothetical protein complement(4453032..4453664) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793402 YP_005202095.1 CDS Rahaq2_4187 NC_016818.1 4453910 4454374 R PFAM: AsnC family; transcriptional regulator complement(4453910..4454374) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793403 YP_005202096.1 CDS Rahaq2_4188 NC_016818.1 4454522 4455301 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 4454522..4455301 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793404 YP_005202097.1 CDS Rahaq2_4189 NC_016818.1 4455305 4456384 R PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase complement(4455305..4456384) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793405 YP_005202098.1 CDS Rahaq2_4190 NC_016818.1 4456563 4457969 R PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase complement(4456563..4457969) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793406 YP_005202099.1 CDS Rahaq2_4191 NC_016818.1 4458152 4459135 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent oxidoreductase 4458152..4459135 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794269 YP_005202100.1 CDS Rahaq2_4192 NC_016818.1 4459539 4459775 R PFAM: Phage shock protein G (Phageshock_PspG); TIGRFAM: phage shock protein G; phage shock protein G complement(4459539..4459775) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793407 YP_005202101.1 CDS Rahaq2_4193 NC_016818.1 4459969 4460997 R PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A; tRNA dihydrouridine synthase A complement(4459969..4460997) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793408 YP_005202102.1 CDS Rahaq2_4194 NC_016818.1 4461241 4461750 D PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein 4461241..4461750 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793409 YP_005202103.1 CDS Rahaq2_4195 NC_016818.1 4461886 4462095 R PFAM: CsbD-like; hypothetical protein complement(4461886..4462095) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793410 YP_005202104.1 CDS Rahaq2_4196 NC_016818.1 4462493 4463101 R PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; SOS regulatory protein LexA complement(4462493..4463101) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793411 YP_005202105.1 CDS Rahaq2_4197 NC_016818.1 4463221 4463589 R PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase complement(4463221..4463589) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793412 YP_005202106.1 CDS Rahaq2_4198 NC_016818.1 4463707 4466190 D PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase; glycerol-3-phosphate O-acyltransferase 4463707..4466190 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793413 YP_005202107.1 CDS Rahaq2_4199 NC_016818.1 4466294 4467205 R PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial; 4-hydroxybenzoate polyprenyl transferase complement(4466294..4467205) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793414 YP_005202108.1 CDS Rahaq2_4200 NC_016818.1 4467202 4467741 R PFAM: Chorismate lyase; 4-hydroxybenzoate synthetase complement(4467202..4467741) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793415 YP_005202109.1 CDS Rahaq2_4201 NC_016818.1 4467831 4468217 R PFAM: Phosphate-starvation-inducible E; hypothetical protein complement(4467831..4468217) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793416 YP_005202110.1 CDS Rahaq2_4202 NC_016818.1 4468490 4470136 R PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase complement(4468490..4470136) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794270 YP_005202111.1 CDS Rahaq2_4204 NC_016818.1 4470661 4472049 D PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; aspartate kinase 4470661..4472049 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793417 YP_005202112.1 CDS Rahaq2_4205 NC_016818.1 4472141 4473058 D PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; putative Na+-dependent transporter 4472141..4473058 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793418 YP_005202113.1 CDS Rahaq2_4206 NC_016818.1 4473126 4474778 R PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Phosphate:Na+ Symporter (PNaS) Family; Na/Pi-cotransporter complement(4473126..4474778) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793419 YP_005202114.1 CDS Rahaq2_4207 NC_016818.1 4474794 4475450 R TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; HAD-superfamily hydrolase complement(4474794..4475450) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793420 YP_005202115.1 CDS Rahaq2_4208 NC_016818.1 4475447 4476439 R PFAM: ABC transporter; spermidine/putrescine ABC transporter ATPase complement(4475447..4476439) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793421 YP_005202116.1 CDS Rahaq2_4209 NC_016818.1 4476442 4477227 R PFAM: Binding-protein-dependent transport system inner membrane component; spermidine/putrescine ABC transporter permease II complement(4476442..4477227) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793422 YP_005202117.1 CDS Rahaq2_4210 NC_016818.1 4477250 4478092 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC transporter permease complement(4477250..4478092) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793423 YP_005202118.1 CDS Rahaq2_4211 NC_016818.1 4478119 4478916 R PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; putative AP superfamily protein complement(4478119..4478916) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793424 YP_005202119.1 CDS Rahaq2_4212 NC_016818.1 4478992 4480050 R PFAM: Bacterial extracellular solute-binding protein; Fe3+ ABC transporter periplasmic protein complement(4478992..4480050) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793425 YP_005202120.1 CDS Rahaq2_4213 NC_016818.1 4480253 4480963 D PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator 4480253..4480963 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793426 YP_005202121.1 CDS Rahaq2_4215 NC_016818.1 4481199 4484900 R PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; 5-methyltetrahydrofolate--homocysteine methyltransferase complement(4481199..4484900) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793428 YP_005202122.1 CDS Rahaq2_4216 NC_016818.1 4485148 4485990 D PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; transcriptional regulator 4485148..4485990 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793429 YP_005202123.1 CDS Rahaq2_4217 NC_016818.1 4486036 4487748 R PFAM: Isocitrate dehydrogenase kinase/phosphatase (AceK); isocitrate dehydrogenase kinase/phosphatase complement(4486036..4487748) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794271 YP_005202124.1 CDS Rahaq2_4218 NC_016818.1 4487801 4489123 R PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase; isocitrate lyase complement(4487801..4489123) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793430 YP_005202125.1 CDS Rahaq2_4219 NC_016818.1 4489164 4490762 R PFAM: Malate synthase; TIGRFAM: malate synthase A; malate synthase A complement(4489164..4490762) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793431 YP_005202126.1 CDS Rahaq2_4220 NC_016818.1 4491135 4492064 R PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase complement(4491135..4492064) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793432 YP_005202127.1 CDS Rahaq2_4225 NC_016818.1 4498195 4499784 D PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4498195..4499784 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793436 YP_005202128.1 CDS Rahaq2_4226 NC_016818.1 4499831 4501120 D PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 4499831..4501120 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793437 YP_005202129.1 CDS Rahaq2_4227 NC_016818.1 4501185 4501880 R PFAM: Protein of unknown function (DUF1481); manually curated; hypothetical protein complement(4501185..4501880) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793438 YP_005202130.1 CDS Rahaq2_4228 NC_016818.1 4501890 4502162 R PFAM: Bacterial DNA-binding protein; nucleoid DNA-binding protein complement(4501890..4502162) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794273 YP_005202131.1 CDS Rahaq2_4229 NC_016818.1 4502353 4502943 R PFAM: Protein of unknown function, DUF; hypothetical protein complement(4502353..4502943) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793439 YP_005202132.1 CDS Rahaq2_4230 NC_016818.1 4503014 4503694 R PFAM: Endonuclease V; deoxyinosine 3'endonuclease complement(4503014..4503694) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793440 YP_005202133.1 CDS Rahaq2_4231 NC_016818.1 4503704 4504768 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase complement(4503704..4504768) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793441 YP_005202134.1 CDS Rahaq2_4232 NC_016818.1 4504840 4505616 R PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain; Zn-finger containing NTP pyrophosphohydrolase complement(4504840..4505616) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793442 YP_005202135.1 CDS Rahaq2_4233 NC_016818.1 4505716 4506231 D PFAM: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ; regulator of sigma D 4505716..4506231 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793443 YP_005202136.1 CDS Rahaq2_4234 NC_016818.1 4506323 4506487 R hypothetical protein complement(4506323..4506487) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793444 YP_005202137.1 CDS Rahaq2_4235 NC_016818.1 4506554 4508518 D PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 4506554..4508518 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793445 YP_005202138.1 CDS Rahaq2_4236 NC_016818.1 4508515 4509168 D PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine-phosphate pyrophosphorylase 4508515..4509168 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793446 YP_005202139.1 CDS Rahaq2_4237 NC_016818.1 4509161 4509910 D PFAM: MoeZ/MoeB domain; ThiF family; dinucleotide-utilizing protein 4509161..4509910 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793447 YP_005202140.1 CDS Rahaq2_4238 NC_016818.1 4509907 4510107 D PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 4509907..4510107 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793448 YP_005202141.1 CDS Rahaq2_4239 NC_016818.1 4510109 4510888 D PFAM: Thiazole biosynthesis protein ThiG; putative enzyme of thiazole biosynthesis 4510109..4510888 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793449 YP_005202142.1 CDS Rahaq2_4240 NC_016818.1 4510885 4512063 D PFAM: Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH; thiazole biosynthesis protein ThiH 4510885..4512063 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793450 YP_005202143.1 CDS Rahaq2_4241 NC_016818.1 4512294 4516514 R PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta'' complement(4512294..4516514) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793451 YP_005202144.1 CDS Rahaq2_4242 NC_016818.1 4516606 4520634 R PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta complement(4516606..4520634) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793452 YP_005202145.1 CDS Rahaq2_4244 NC_016818.1 4520967 4521332 R PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(4520967..4521332) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793454 YP_005202146.1 CDS Rahaq2_4245 NC_016818.1 4521399 4521896 R PFAM: Ribosomal protein L10; 50S ribosomal protein L10 complement(4521399..4521896) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793455 YP_005202147.1 CDS Rahaq2_4246 NC_016818.1 4522234 4522938 R PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 complement(4522234..4522938) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793456 YP_005202148.1 CDS Rahaq2_4247 NC_016818.1 4522942 4523370 R PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 complement(4522942..4523370) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794274 YP_005202149.1 CDS Rahaq2_4248 NC_016818.1 4523549 4524094 R PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription termination/antitermination factor NusG complement(4523549..4524094) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794275 YP_005202150.1 CDS Rahaq2_4249 NC_016818.1 4524095 4524478 R PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; Preprotein translocase subunit SecE complement(4524095..4524478) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793457 YP_005202151.1 CDS Rahaq2_4250 NC_016818.1 4524732 4525916 R PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor TU complement(4524732..4525916) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793458 YP_005202152.1 CDS Rahaq2_4255 NC_016818.1 4526880 4527416 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 4526880..4527416 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793461 YP_005202153.1 CDS Rahaq2_4256 NC_016818.1 4527637 4528587 D PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: pantothenate kinase, bacterial type; manually curated; pantothenate kinase 4527637..4528587 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793462 YP_005202154.1 CDS Rahaq2_4257 NC_016818.1 4528641 4529600 R PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain; biotin-(acetyl-CoA-carboxylase) ligase BirA complement(4528641..4529600) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793463 YP_005202155.1 CDS Rahaq2_4258 NC_016818.1 4529597 4530634 R PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(4529597..4530634) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793464 YP_005202156.1 CDS Rahaq2_4263 NC_016818.1 4536416 4536955 R flavodoxin complement(4536416..4536955) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793469 YP_005202157.1 CDS Rahaq2_4264 NC_016818.1 4536978 4538429 R PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; TrkH family potassium uptake protein complement(4536978..4538429) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793470 YP_005202158.1 CDS Rahaq2_4265 NC_016818.1 4538467 4539078 R PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein complement(4538467..4539078) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793471 YP_005202159.1 CDS Rahaq2_4266 NC_016818.1 4539078 4540409 R PFAM: Metallopeptidase family M24; Xaa-Pro aminopeptidase complement(4539078..4540409) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793472 YP_005202160.1 CDS Rahaq2_4267 NC_016818.1 4540599 4542791 D PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; TIGRFAM: fatty oxidation complex, alpha subunit FadB; fatty acid oxidation complex subunit FadB 4540599..4542791 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793473 YP_005202161.1 CDS Rahaq2_4268 NC_016818.1 4542803 4543966 D PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; fatty oxidation complex, beta subunit FadA; fatty oxidation complex, beta subunit FadA 4542803..4543966 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793474 YP_005202162.1 CDS Rahaq2_4269 NC_016818.1 4544084 4544785 R PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; 2-polyprenylphenol 6-hydroxylase complement(4544084..4544785) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793475 YP_005202163.1 CDS Rahaq2_4270 NC_016818.1 4544834 4546324 R PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; UbiD family decarboxylase complement(4544834..4546324) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793476 YP_005202164.1 CDS Rahaq2_4271 NC_016818.1 4546519 4547244 R PFAM: Peptidase family S51; peptidase E complement(4546519..4547244) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794278 YP_005202165.1 CDS Rahaq2_4272 NC_016818.1 4547366 4547905 D PFAM: Transcription termination factor nusG; TIGRFAM: transcriptional activator RfaH; transcriptional activator RfaH 4547366..4547905 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793477 YP_005202166.1 CDS Rahaq2_4273 NC_016818.1 4547981 4548772 R PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; Mg-dependent DNase complement(4547981..4548772) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793478 YP_005202167.1 CDS Rahaq2_4274 NC_016818.1 4548832 4549599 R PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; twin arginine targeting protein translocase subunit TatC complement(4548832..4549599) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794279 YP_005202168.1 CDS Rahaq2_4275 NC_016818.1 4549602 4550252 R TIGRFAM: twin arginine-targeting protein translocase TatB; twin arginine-targeting protein translocase TatB complement(4549602..4550252) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793479 YP_005202169.1 CDS Rahaq2_4276 NC_016818.1 4550256 4550522 R PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase, TatA/E family complement(4550256..4550522) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793480 YP_005202170.1 CDS Rahaq2_4277 NC_016818.1 4550596 4552227 R PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase complement(4550596..4552227) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793481 YP_005202171.1 CDS Rahaq2_4278 NC_016818.1 4552224 4552832 R PFAM: SCP-2 sterol transfer family; hypothetical protein complement(4552224..4552832) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793482 YP_005202172.1 CDS Rahaq2_4279 NC_016818.1 4552846 4553601 R PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase complement(4552846..4553601) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793483 YP_005202173.1 CDS Rahaq2_4280 NC_016818.1 4553733 4555274 R PFAM: RmuC family; hypothetical protein complement(4553733..4555274) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793484 YP_005202174.1 CDS Rahaq2_4281 NC_016818.1 4555431 4555958 R PFAM: SNARE associated Golgi protein; putative membrane-associated protein complement(4555431..4555958) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793485 YP_005202175.1 CDS Rahaq2_4282 NC_016818.1 4556119 4556883 R PFAM: Phosphorylase superfamily; TIGRFAM: uridine phosphorylase; uridine phosphorylase complement(4556119..4556883) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793486 YP_005202176.1 CDS Rahaq2_4283 NC_016818.1 4557108 4559450 R PFAM: Catalase; Catalase-related immune-responsive; catalase complement(4557108..4559450) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793487 YP_005202177.1 CDS Rahaq2_4284 NC_016818.1 4559575 4560402 D PFAM: Dienelactone hydrolase family; dienelactone hydrolase-like enzyme 4559575..4560402 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793488 YP_005202178.1 CDS Rahaq2_4285 NC_016818.1 4560490 4561152 R PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; fructose-6-phosphate aldolase, TalC/MipB family complement(4560490..4561152) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793489 YP_005202179.1 CDS Rahaq2_4286 NC_016818.1 4561164 4563668 R PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PTS HPr component phosphorylation site; PEP-utilising enzyme, N-terminal; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase System HPr (HPr) Family; PTS system, fructose subfamily, IIA component; phosphoenolpyruvate-protein phosphotransferase complement(4561164..4563668) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793490 YP_005202180.1 CDS Rahaq2_4287 NC_016818.1 4564035 4565114 D PFAM: Phosphotransferase system, EIIC; TIGRFAM: PTS system, fructose subfamily, IIC component; PTS system, fructose subfamily, IIC component 4564035..4565114 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793491 YP_005202181.1 CDS Rahaq2_4288 NC_016818.1 4565144 4565473 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system fructose-specific transporter subunit IIB 4565144..4565473 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793492 YP_005202182.1 CDS Rahaq2_4289 NC_016818.1 4565490 4567787 D PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; pyruvate formate-lyase 4565490..4567787 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793493 YP_005202183.1 CDS Rahaq2_4290 NC_016818.1 4567753 4568640 D PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family; glycyl-radical enzyme activator family protein 4567753..4568640 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793494 YP_005202184.1 CDS Rahaq2_4291 NC_016818.1 4568666 4569010 D PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system fructose-specific transporter subunit IIB 4568666..4569010 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793495 YP_005202185.1 CDS Rahaq2_4292 NC_016818.1 4569196 4571475 R PFAM: Cobalamin-independent synthase, Catalytic domain; Cobalamin-independent synthase, N-terminal domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(4569196..4571475) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794280 YP_005202186.1 CDS Rahaq2_4293 NC_016818.1 4571580 4572515 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 4571580..4572515 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793496 YP_005202187.1 CDS Rahaq2_4294 NC_016818.1 4572421 4573320 R PFAM: EamA-like transporter family; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter; Carboxylate/Amino Acid/Amine Transporter complement(4572421..4573320) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793497 YP_005202188.1 CDS Rahaq2_4295 NC_016818.1 4573534 4573836 D PFAM: Protein of unknown function (DUF2756); hypothetical protein 4573534..4573836 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794281 YP_005202189.1 CDS Rahaq2_4296 NC_016818.1 4573897 4574637 R PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase complement(4573897..4574637) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793498 YP_005202190.1 CDS Rahaq2_4297 NC_016818.1 4574640 4575713 R PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATPase complement(4574640..4575713) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793499 YP_005202191.1 CDS Rahaq2_4298 NC_016818.1 4575720 4576565 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(4575720..4576565) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794282 YP_005202192.1 CDS Rahaq2_4299 NC_016818.1 4576562 4577449 R PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease complement(4576562..4577449) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793500 YP_005202193.1 CDS Rahaq2_4300 NC_016818.1 4577593 4578906 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(4577593..4578906) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793501 YP_005202194.1 CDS Rahaq2_4301 NC_016818.1 4579119 4580306 R PFAM: Aminotransferase class I and II; transcriptional regulator with HTH domain and aminotransferase domain complement(4579119..4580306) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793502 YP_005202195.1 CDS Rahaq2_4302 NC_016818.1 4580438 4581139 R PFAM: ABC transporter; branched-chain amino acid ABC transporter ATPase complement(4580438..4581139) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793503 YP_005202196.1 CDS Rahaq2_4303 NC_016818.1 4581167 4581937 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; branched-chain amino acid ABC transporter ATPase complement(4581167..4581937) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793504 YP_005202197.1 CDS Rahaq2_4304 NC_016818.1 4581934 4583223 R PFAM: Branched-chain amino acid transport system / permease component; Domain of unknown function (DUF3382); branched-chain amino acid ABC transporter permease complement(4581934..4583223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793505 YP_005202198.1 CDS Rahaq2_4305 NC_016818.1 4583220 4584146 R PFAM: Branched-chain amino acid transport system / permease component; branched-chain amino acid ABC transporter permease complement(4583220..4584146) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793506 YP_005202199.1 CDS Rahaq2_4306 NC_016818.1 4584361 4585473 R PFAM: Receptor family ligand binding region; branched-chain amino acid ABC transporter periplasmic protein complement(4584361..4585473) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793507 YP_005202200.1 CDS Rahaq2_4307 NC_016818.1 4585877 4586257 D PFAM: Acetyltransferase (GNAT) family; Acetyltransferase, GNAT family; acetyltransferase, N-acetylglutamate synthase 4585877..4586257 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793508 YP_005202201.1 CDS Rahaq2_4308 NC_016818.1 4586339 4587196 R PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH; alternative sigma factor RpoH complement(4586339..4587196) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793509 YP_005202202.1 CDS Rahaq2_4309 NC_016818.1 4587517 4588497 R PFAM: Predicted permease; TIGRFAM: putative protein insertion permease FtsX; putative protein insertion permease FtsX complement(4587517..4588497) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793510 YP_005202203.1 CDS Rahaq2_4310 NC_016818.1 4588497 4589159 R PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE complement(4588497..4589159) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793511 YP_005202204.1 CDS Rahaq2_4311 NC_016818.1 4589165 4590637 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY complement(4589165..4590637) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793512 YP_005202205.1 CDS Rahaq2_4312 NC_016818.1 4590864 4591475 D PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; RsmD family RNA methyltransferase 4590864..4591475 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793513 YP_005202206.1 CDS Rahaq2_4313 NC_016818.1 4591477 4591755 D PFAM: Protein of unknown function (DUF1145); hypothetical protein 4591477..4591755 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793514 YP_005202207.1 CDS Rahaq2_4314 NC_016818.1 4591966 4592592 D PFAM: YhhN-like protein; hypothetical protein 4591966..4592592 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793515 YP_005202208.1 CDS Rahaq2_4315 NC_016818.1 4592705 4595059 D PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 4592705..4595059 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793516 YP_005202209.1 CDS Rahaq2_4316 NC_016818.1 4595078 4595338 R PFAM: SirA-like protein; putative redox protein, regulator of disulfide bond formation complement(4595078..4595338) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793517 YP_005202210.1 CDS Rahaq2_4317 NC_016818.1 4595598 4596269 D PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 4595598..4596269 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793518 YP_005202211.1 CDS Rahaq2_4318 NC_016818.1 4596395 4596961 D hypothetical protein 4596395..4596961 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793519 YP_005202212.1 CDS Rahaq2_4319 NC_016818.1 4597186 4597878 D hypothetical protein 4597186..4597878 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793520 YP_005202213.1 CDS Rahaq2_4320 NC_016818.1 4598450 4599802 D PFAM: Major Facilitator Superfamily; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter family protein; glycerol-3-phosphate transporter 4598450..4599802 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793521 YP_005202214.1 CDS Rahaq2_4321 NC_016818.1 4599852 4600928 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(4599852..4600928) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794283 YP_005202215.1 CDS Rahaq2_4322 NC_016818.1 4600959 4602323 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase complement(4600959..4602323) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793522 YP_005202216.1 CDS Rahaq2_4323 NC_016818.1 4602378 4603412 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(4602378..4603412) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794284 YP_005202217.1 CDS Rahaq2_4324 NC_016818.1 4603679 4604941 D PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein 4603679..4604941 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793523 YP_005202218.1 CDS Rahaq2_4325 NC_016818.1 4604945 4605814 D PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease 4604945..4605814 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793524 YP_005202219.1 CDS Rahaq2_4326 NC_016818.1 4605814 4606692 D PFAM: Binding-protein-dependent transport system inner membrane component; sugar ABC transporter permease 4605814..4606692 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793525 YP_005202220.1 CDS Rahaq2_4327 NC_016818.1 4606705 4608255 D PFAM: Alpha amylase, catalytic domain; glycosidase 4606705..4608255 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793526 YP_005202221.1 CDS Rahaq2_4328 NC_016818.1 4608236 4609303 D PFAM: Domain of unknown function (DUF377); putative glycosylase 4608236..4609303 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793527 YP_005202222.1 CDS Rahaq2_4329 NC_016818.1 4609276 4610214 D PFAM: Protein of unknown function (DUF1861); hypothetical protein 4609276..4610214 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793528 YP_005202223.1 CDS Rahaq2_4330 NC_016818.1 4610229 4611407 D hypothetical protein 4610229..4611407 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793529 YP_005202224.1 CDS Rahaq2_4331 NC_016818.1 4611519 4612787 D hypothetical protein 4611519..4612787 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793530 YP_005202225.1 CDS Rahaq2_4332 NC_016818.1 4613083 4614675 D PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; hemolysin activation/secretion protein 4613083..4614675 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793531 YP_005202226.1 CDS Rahaq2_4333 NC_016818.1 4614728 4616053 D PFAM: Haemagluttinin repeat; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; filamentous hemagglutinin family N-terminal domain protein 4614728..4616053 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793532 YP_005202227.1 CDS Rahaq2_4334 NC_016818.1 4616068 4618248 D PFAM: Possible hemagglutinin (DUF638); putative hemagglutinin 4616068..4618248 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793533 YP_005202228.1 CDS Rahaq2_4335 NC_016818.1 4618245 4618511 D hypothetical protein 4618245..4618511 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793534 YP_005202229.1 CDS Rahaq2_4337 NC_016818.1 4618815 4619624 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase complement(4618815..4619624) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793536 YP_005202230.1 CDS Rahaq2_4338 NC_016818.1 4619673 4620665 R PFAM: Putative lysophospholipase; lysophospholipase complement(4619673..4620665) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793537 YP_005202231.1 CDS Rahaq2_4339 NC_016818.1 4620787 4621407 D PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein; putative threonine efflux protein 4620787..4621407 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793538 YP_005202232.1 CDS Rahaq2_4340 NC_016818.1 4621472 4622089 R PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein; RhtB family protein, resistance to homoserine/threonine complement(4621472..4622089) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793539 YP_005202233.1 CDS Rahaq2_4341 NC_016818.1 4622127 4623959 R PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ complement(4622127..4623959) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793540 YP_005202234.1 CDS Rahaq2_4342 NC_016818.1 4624090 4624968 R PFAM: Phospholipase A1; outer membrane phospholipase A complement(4624090..4624968) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793541 YP_005202235.1 CDS Rahaq2_4343 NC_016818.1 4625223 4625705 D PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; hypothetical protein 4625223..4625705 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794285 YP_005202236.1 CDS Rahaq2_4344 NC_016818.1 4625754 4626659 D PFAM: EamA-like transporter family; TIGRFAM: rarD protein; rarD protein 4625754..4626659 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793542 YP_005202237.1 CDS Rahaq2_4345 NC_016818.1 4626633 4627667 R PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; membrane protein AbrB complement(4626633..4627667) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793543 YP_005202238.1 CDS Rahaq2_4346 NC_016818.1 4627698 4628648 R PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); magnesium Mg(2+) and cobalt Co(2+) transport protein CorA complement(4627698..4628648) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793544 YP_005202239.1 CDS Rahaq2_4347 NC_016818.1 4629069 4629545 D PFAM: WxcM-like, C-terminal; WxcM-like protein 4629069..4629545 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793545 YP_005202240.1 CDS Rahaq2_4348 NC_016818.1 4629688 4631850 R PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II; DNA helicase II complement(4629688..4631850) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793546 YP_005202241.1 CDS Rahaq2_4349 NC_016818.1 4631948 4632664 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein complement(4631948..4632664) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793547 YP_005202242.1 CDS Rahaq2_4350 NC_016818.1 4632664 4633575 R PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerC complement(4632664..4633575) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794286 YP_005202243.1 CDS Rahaq2_4351 NC_016818.1 4633572 4634276 R PFAM: Protein of unknown function, DUF484; hypothetical protein complement(4633572..4634276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793548 YP_005202244.1 CDS Rahaq2_4352 NC_016818.1 4634273 4635097 R PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(4634273..4635097) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793549 YP_005202245.1 CDS Rahaq2_4353 NC_016818.1 4635200 4635403 R Untagged, good start found, extended gene length<=100aa and >= 90% the length of the second longest homolog; manually curated; putative small periplasmic lipoprotein complement(4635200..4635403) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793550 YP_005202246.1 CDS Rahaq2_4354 NC_016818.1 4635562 4638120 R PFAM: Adenylate cyclase, class-I; adenylate cyclase complement(4635562..4638120) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793551 YP_005202247.1 CDS Rahaq2_4355 NC_016818.1 4638451 4639392 D PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; porphobilinogen deaminase 4638451..4639392 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793552 YP_005202248.1 CDS Rahaq2_4356 NC_016818.1 4639389 4640138 D PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen-III synthase 4639389..4640138 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794287 YP_005202249.1 CDS Rahaq2_4357 NC_016818.1 4640152 4641303 D PFAM: HemX; putative enzyme of heme biosynthesis 4640152..4641303 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793553 YP_005202250.1 CDS Rahaq2_4358 NC_016818.1 4641307 4642503 D PFAM: HemY protein N-terminus; Tetratricopeptide repeat; TIGRFAM: hemY protein; hemY protein 4641307..4642503 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793554 YP_005202251.1 CDS Rahaq2_4365 NC_016818.1 4643882 4645276 R PFAM: Amino acid permease; gamma-aminobutyrate permease complement(4643882..4645276) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793560 YP_005202252.1 CDS Rahaq2_4366 NC_016818.1 4645518 4646258 R PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; WecB/TagA/CpsF family exopolysaccharide biosynthesis protein complement(4645518..4646258) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793561 YP_005202253.1 CDS Rahaq2_4367 NC_016818.1 4646242 4647621 R PFAM: WzyE protein; WzyE protein complement(4646242..4647621) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793562 YP_005202254.1 CDS Rahaq2_4368 NC_016818.1 4647618 4648700 R PFAM: 4-alpha-L-fucosyltransferase (Fuc4NAc transferase); 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) complement(4647618..4648700) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794289 YP_005202255.1 CDS Rahaq2_4369 NC_016818.1 4648697 4649947 R PFAM: Polysaccharide biosynthesis protein; membrane protein complement(4648697..4649947) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793563 YP_005202256.1 CDS Rahaq2_4370 NC_016818.1 4649949 4651079 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; TDP-4-keto-6-deoxy-D-glucose transaminase complement(4649949..4651079) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793564 YP_005202257.1 CDS Rahaq2_4371 NC_016818.1 4651084 4651818 R PFAM: Acetyltransferase (GNAT) family; TIGRFAM: TDP-D-fucosamine acetyltransferase; TDP-D-fucosamine acetyltransferase complement(4651084..4651818) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794290 YP_005202258.1 CDS Rahaq2_4372 NC_016818.1 4651785 4653047 R PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(4651785..4653047) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793565 YP_005202259.1 CDS Rahaq2_4373 NC_016818.1 4653044 4654174 R PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; UDP-N-acetylglucosamine 2-epimerase complement(4653044..4654174) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793566 YP_005202260.1 CDS Rahaq2_4374 NC_016818.1 4654171 4655223 R PFAM: Chain length determinant protein; chain length determinant protein complement(4654171..4655223) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793567 YP_005202261.1 CDS Rahaq2_4375 NC_016818.1 4655268 4656338 R PFAM: Glycosyl transferase family 4; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(4655268..4656338) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793568 YP_005202262.1 CDS Rahaq2_4376 NC_016818.1 4656641 4657900 R PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho complement(4656641..4657900) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793569 YP_005202263.1 CDS Rahaq2_4377 NC_016818.1 4658316 4658642 R PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin complement(4658316..4658642) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793570 YP_005202264.1 CDS Rahaq2_4378 NC_016818.1 4658760 4660052 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DNA/RNA helicase 4658760..4660052 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793571 YP_005202265.1 CDS Rahaq2_4379 NC_016818.1 4660059 4661549 D PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase; exopolyphosphatase 4660059..4661549 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793572 YP_005202266.1 CDS Rahaq2_4380 NC_016818.1 4661639 4663663 R PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep complement(4661639..4663663) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793573 YP_005202267.1 CDS Rahaq2_4381 NC_016818.1 4663840 4664121 D PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase 4663840..4664121 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793574 YP_005202268.1 CDS Rahaq2_4382 NC_016818.1 4664316 4665791 R PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(4664316..4665791) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793575 YP_005202269.1 CDS Rahaq2_4383 NC_016818.1 4665978 4666859 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 4665978..4666859 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794291 YP_005202270.1 CDS Rahaq2_4384 NC_016818.1 4666909 4668453 R PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine ammonia-lyase, biosynthetic, long form complement(4666909..4668453) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793576 YP_005202271.1 CDS Rahaq2_4385 NC_016818.1 4668459 4670309 R PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase complement(4668459..4670309) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793577 YP_005202272.1 CDS Rahaq2_4386 NC_016818.1 4670383 4671312 R PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; branched-chain amino acid aminotransferase, group I complement(4670383..4671312) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793578 YP_005202273.1 CDS Rahaq2_4387 NC_016818.1 4671330 4671593 R acetolactate synthase (isozyme II), small (regulatory) subunit complement(4671330..4671593) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793579 YP_005202274.1 CDS Rahaq2_4388 NC_016818.1 4671590 4673236 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(4671590..4673236) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793580 YP_005202275.1 CDS Rahaq2_4389 NC_016818.1 4673383 4673484 R PFAM: IlvGEDA operon leader peptide; manually curated; IlvGEDA operon leader peptide complement(4673383..4673484) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793581 YP_005202276.1 CDS Rahaq2_4390 NC_016818.1 4673617 4674855 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(4673617..4674855) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794292 YP_005202277.1 CDS Rahaq2_4391 NC_016818.1 4675221 4676756 D PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; Mg chelatase-like protein 4675221..4676756 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793582 YP_005202278.1 CDS Rahaq2_4392 NC_016818.1 4676782 4677120 R PFAM: Protein of unknown function, DUF; hypothetical protein complement(4676782..4677120) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793583 YP_005202279.1 CDS Rahaq2_4393 NC_016818.1 4677239 4678063 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 4677239..4678063 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793584 YP_005202280.1 CDS Rahaq2_4394 NC_016818.1 4678076 4679062 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(4678076..4679062) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793585 YP_005202281.1 CDS Rahaq2_4395 NC_016818.1 4679062 4680060 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(4679062..4680060) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793586 YP_005202282.1 CDS Rahaq2_4396 NC_016818.1 4680092 4681600 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(4680092..4681600) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794293 YP_005202283.1 CDS Rahaq2_4397 NC_016818.1 4681684 4682640 R PFAM: family; sugar ABC transporter periplasmic protein complement(4681684..4682640) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793587 YP_005202284.1 CDS Rahaq2_4405 NC_016818.1 4689026 4689907 R PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; glutamate racemase complement(4689026..4689907) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793594 YP_005202285.1 CDS Rahaq2_4406 NC_016818.1 4689852 4691729 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; TonB-dependent vitamin B12 receptor complement(4689852..4691729) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793595 YP_005202286.1 CDS Rahaq2_4407 NC_016818.1 4692209 4693309 D PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; tRNA (uracil-5-)-methyltransferase 4692209..4693309 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793596 YP_005202287.1 CDS Rahaq2_4408 NC_016818.1 4693393 4694532 R PFAM: Glycosyl Hydrolase Family 88; putative unsaturated glucuronyl hydrolase complement(4693393..4694532) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793597 YP_005202288.1 CDS Rahaq2_4409 NC_016818.1 4694557 4696143 R PFAM: Major Facilitator Superfamily; Na+/melibiose symporter-like transporter complement(4694557..4696143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793599 YP_005202289.1 CDS Rahaq2_4410 NC_016818.1 4696239 4696358 D hypothetical protein 4696239..4696358 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793601 YP_005202290.1 CDS Rahaq2_4411 NC_016818.1 4696416 4696775 R PFAM: Protein of unknown function (DUF1422); hypothetical protein complement(4696416..4696775) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793603 YP_005202291.1 CDS Rahaq2_4412 NC_016818.1 4696750 4697430 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(4696750..4697430) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794295 YP_005202292.1 CDS Rahaq2_4413 NC_016818.1 4697642 4699042 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component 4697642..4699042 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793606 YP_005202293.1 CDS Rahaq2_4414 NC_016818.1 4699025 4699948 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(4699025..4699948) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793607 YP_005202294.1 CDS Rahaq2_4415 NC_016818.1 4700109 4700870 D PFAM: Glutaredoxin; Redoxin; TIGRFAM: Glutaredoxin-family domain; Glutaredoxin-family domain protein 4700109..4700870 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793608 YP_005202295.1 CDS Rahaq2_4416 NC_016818.1 4700926 4702299 R PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase complement(4700926..4702299) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793609 YP_005202296.1 CDS Rahaq2_4417 NC_016818.1 4702386 4703159 R PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; acetylglutamate kinase complement(4702386..4703159) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793610 YP_005202297.1 CDS Rahaq2_4418 NC_016818.1 4703291 4704295 R PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase, common form complement(4703291..4704295) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793611 YP_005202298.1 CDS Rahaq2_4419 NC_016818.1 4704440 4705585 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase (ArgE); acetylornithine deacetylase ArgE 4704440..4705585 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793612 YP_005202299.1 CDS Rahaq2_4420 NC_016818.1 4705892 4708537 D PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 4705892..4708537 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793613 YP_005202300.1 CDS Rahaq2_4421 NC_016818.1 4708610 4709518 R PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase complement(4708610..4709518) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793614 YP_005202301.1 CDS Rahaq2_4422 NC_016818.1 4709797 4712232 R PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; Amino acid kinase family; TIGRFAM: aspartate kinase; aspartokinase complement(4709797..4712232) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793615 YP_005202302.1 CDS Rahaq2_4423 NC_016818.1 4712235 4713395 R PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine (thiol)-lyase; O-succinylhomoserine (thiol)-lyase complement(4712235..4713395) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793616 YP_005202303.1 CDS Rahaq2_4425 NC_016818.1 4713725 4714042 D PFAM: Met Apo-repressor, MetJ; transcriptional regulator 4713725..4714042 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793618 YP_005202304.1 CDS Rahaq2_4426 NC_016818.1 4714195 4714407 R PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(4714195..4714407) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793619 YP_005202305.1 CDS Rahaq2_4427 NC_016818.1 4714609 4716804 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; primosomal protein N'' 4714609..4716804 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793620 YP_005202306.1 CDS Rahaq2_4428 NC_016818.1 4716966 4718036 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 4716966..4718036 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794297 YP_005202307.1 CDS Rahaq2_4429 NC_016818.1 4718136 4719080 D PFAM: Sporulation related domain; TIGRFAM: cell division protein FtsN; manually curated; cell division protein FtsN 4718136..4719080 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793621 YP_005202308.1 CDS Rahaq2_4430 NC_016818.1 4719196 4719726 D PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease HslVU, peptidase subunit 4719196..4719726 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794298 YP_005202309.1 CDS Rahaq2_4431 NC_016818.1 4719739 4721073 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; ATP-dependent carboxylate-amine ligase 4719739..4721073 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793622 YP_005202310.1 CDS Rahaq2_4432 NC_016818.1 4721168 4722094 D PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4721168..4722094 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793623 YP_005202311.1 CDS Rahaq2_4433 NC_016818.1 4722215 4722700 D PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy; regulator of ribonuclease activity A; ribonuclease activity A regulator 4722215..4722700 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794299 YP_005202312.1 CDS Rahaq2_4434 NC_016818.1 4722765 4723004 R PFAM: Protein of unknown function (DUF904); hypothetical protein complement(4722765..4723004) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793624 YP_005202313.1 CDS Rahaq2_4435 NC_016818.1 4723583 4724431 D PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; MIP family channel protein 4723583..4724431 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793625 YP_005202314.1 CDS Rahaq2_4436 NC_016818.1 4724477 4726000 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; glycerol kinase 4724477..4726000 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793626 YP_005202315.1 CDS Rahaq2_4437 NC_016818.1 4726144 4727154 D PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II; fructose-1,6-bisphosphatase 4726144..4727154 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793627 YP_005202316.1 CDS Rahaq2_4438 NC_016818.1 4727212 4728405 R PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; arabinose efflux permease family protein complement(4727212..4728405) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793628 YP_005202317.1 CDS Rahaq2_4439 NC_016818.1 4728729 4729475 D PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; flavodoxin reductase family protein 4728729..4729475 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793629 YP_005202318.1 CDS Rahaq2_4440 NC_016818.1 4729491 4729913 R PFAM: Protein of unknown function (DUF805); hypothetical protein complement(4729491..4729913) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793630 YP_005202319.1 CDS Rahaq2_4441 NC_016818.1 4730072 4730683 D PFAM: Protein of unknown function (DUF1454); hypothetical protein 4730072..4730683 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793631 YP_005202320.1 CDS Rahaq2_4442 NC_016818.1 4730811 4731578 D PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 4730811..4731578 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793632 YP_005202321.1 CDS Rahaq2_4443 NC_016818.1 4731677 4732666 R PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein; sulfate/thiosulfate-binding protein complement(4731677..4732666) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793633 YP_005202322.1 CDS Rahaq2_4444 NC_016818.1 4732850 4733836 R PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase complement(4732850..4733836) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793634 YP_005202323.1 CDS Rahaq2_4445 NC_016818.1 4734183 4734692 R P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein complement(4734183..4734692) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793635 YP_005202324.1 CDS Rahaq2_4446 NC_016818.1 4734845 4735546 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 4734845..4735546 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793636 YP_005202325.1 CDS Rahaq2_4447 NC_016818.1 4735543 4736913 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 4735543..4736913 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793637 YP_005202326.1 CDS Rahaq2_4448 NC_016818.1 4736951 4737424 D PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; rRNA methylase 4736951..4737424 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793638 YP_005202327.1 CDS Rahaq2_4449 NC_016818.1 4737477 4738298 R PFAM: Serine acetyltransferase, N-terminal; TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase complement(4737477..4738298) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793639 YP_005202328.1 CDS Rahaq2_4450 NC_016818.1 4738386 4739405 R PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase complement(4738386..4739405) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794300 YP_005202329.1 CDS Rahaq2_4451 NC_016818.1 4739405 4739875 R PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB; protein-export chaperone SecB complement(4739405..4739875) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793640 YP_005202330.1 CDS Rahaq2_4452 NC_016818.1 4739940 4740191 R PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family; glutaredoxin, GrxC family complement(4739940..4740191) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793641 YP_005202331.1 CDS Rahaq2_4453 NC_016818.1 4740245 4740676 R PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase complement(4740245..4740676) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794301 YP_005202332.1 CDS Rahaq2_4454 NC_016818.1 4740981 4742525 D PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 4740981..4742525 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793642 YP_005202333.1 CDS Rahaq2_4455 NC_016818.1 4742698 4743963 D PFAM: Peptidase family M23; membrane-bound metallopeptidase 4742698..4743963 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793643 YP_005202334.1 CDS Rahaq2_4456 NC_016818.1 4743966 4744922 D PFAM: Divergent polysaccharide deacetylase; hypothetical protein 4743966..4744922 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793644 YP_005202335.1 CDS Rahaq2_4457 NC_016818.1 4745077 4746300 D PFAM: Glycosyl transferases group 1; glycosyltransferase 4745077..4746300 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793645 YP_005202336.1 CDS Rahaq2_4458 NC_016818.1 4746303 4747232 D hypothetical protein 4746303..4747232 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793646 YP_005202337.1 CDS Rahaq2_4459 NC_016818.1 4747301 4748323 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; L-threonine 3-dehydrogenase complement(4747301..4748323) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793647 YP_005202338.1 CDS Rahaq2_4460 NC_016818.1 4748333 4749529 R PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate coenzyme A ligase complement(4748333..4749529) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793648 YP_005202339.1 CDS Rahaq2_4461 NC_016818.1 4749772 4750704 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 4749772..4750704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793649 YP_005202340.1 CDS Rahaq2_4462 NC_016818.1 4750735 4751784 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II 4750735..4751784 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793650 YP_005202341.1 CDS Rahaq2_4463 NC_016818.1 4751784 4752767 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 4751784..4752767 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793651 YP_005202342.1 CDS Rahaq2_4464 NC_016818.1 4752770 4753867 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); ADP-heptose--LPS heptosyltransferase 4752770..4753867 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793652 YP_005202343.1 CDS Rahaq2_4465 NC_016818.1 4753860 4754864 D PFAM: Glycosyl transferase family 8 C-terminal; Glycosyl transferase family 8; LPS:glycosyltransferase 4753860..4754864 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793653 YP_005202344.1 CDS Rahaq2_4466 NC_016818.1 4754861 4756147 D hypothetical protein 4754861..4756147 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793654 YP_005202345.1 CDS Rahaq2_4467 NC_016818.1 4756217 4757224 D PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 4756217..4757224 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793655 YP_005202346.1 CDS Rahaq2_4468 NC_016818.1 4757385 4758467 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; lipopolysaccharide heptosyltransferase II; manually curated; lipopolysaccharide heptosyltransferase III, putative 4757385..4758467 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793656 YP_005202347.1 CDS Rahaq2_4469 NC_016818.1 4758460 4759605 D PFAM: Glycosyl transferases group 1; glycosyltransferase 4758460..4759605 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793657 YP_005202348.1 CDS Rahaq2_4470 NC_016818.1 4759726 4761000 D PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); 3-deoxy-D-manno-octulosonic-acid transferase 4759726..4761000 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794302 YP_005202349.1 CDS Rahaq2_4471 NC_016818.1 4761000 4761767 D PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 4761000..4761767 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793658 YP_005202350.1 CDS Rahaq2_4472 NC_016818.1 4761774 4762256 D PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; pantetheine-phosphate adenylyltransferase 4761774..4762256 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793659 YP_005202351.1 CDS Rahaq2_4473 NC_016818.1 4762265 4763074 R PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); formamidopyrimidine-DNA glycosylase Fpg complement(4762265..4763074) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794303 YP_005202352.1 CDS Rahaq2_4474 NC_016818.1 4763215 4763382 R PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 complement(4763215..4763382) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793660 YP_005202353.1 CDS Rahaq2_4475 NC_016818.1 4763394 4763630 R PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 complement(4763394..4763630) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793661 YP_005202354.1 CDS Rahaq2_4476 NC_016818.1 4763897 4764577 R PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein radc complement(4763897..4764577) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793662 YP_005202355.1 CDS Rahaq2_4477 NC_016818.1 4764762 4765979 D PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 4764762..4765979 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793663 YP_005202356.1 CDS Rahaq2_4478 NC_016818.1 4765957 4766415 D PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 4765957..4766415 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793664 YP_005202357.1 CDS Rahaq2_4479 NC_016818.1 4766587 4767183 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 4766587..4767183 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794304 YP_005202358.1 CDS Rahaq2_4480 NC_016818.1 4767242 4767778 R putative membrane-anchored protein complement(4767242..4767778) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793665 YP_005202359.1 CDS Rahaq2_4481 NC_016818.1 4767765 4769972 R PFAM: Predicted membrane protein (DUF2157); hypothetical protein complement(4767765..4769972) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793666 YP_005202360.1 CDS Rahaq2_4482 NC_016818.1 4770005 4770646 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(4770005..4770646) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794305 YP_005202361.1 CDS Rahaq2_4483 NC_016818.1 4770730 4771446 R PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; ribonuclease PH complement(4770730..4771446) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793667 YP_005202362.1 CDS Rahaq2_4484 NC_016818.1 4771573 4772436 D PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; hypothetical protein 4771573..4772436 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793668 YP_005202363.1 CDS Rahaq2_4485 NC_016818.1 4772517 4773791 R PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; beta-ketoacyl-acyl-carrier-protein synthase II complement(4772517..4773791) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793669 YP_005202364.1 CDS Rahaq2_4486 NC_016818.1 4773936 4774556 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(4773936..4774556) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794306 YP_005202365.1 CDS Rahaq2_4487 NC_016818.1 4774903 4775520 D PFAM: UPF0126 domain; hypothetical protein 4774903..4775520 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793670 YP_005202366.1 CDS Rahaq2_4488 NC_016818.1 4775542 4777239 R PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase complement(4775542..4777239) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793671 YP_005202367.1 CDS Rahaq2_4489 NC_016818.1 4777518 4778141 D PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase 4777518..4778141 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794307 YP_005202368.1 CDS Rahaq2_4490 NC_016818.1 4778196 4778471 D PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 4778196..4778471 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793672 YP_005202369.1 CDS Rahaq2_4491 NC_016818.1 4778491 4780599 D PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; RelA/SpoT family (p)ppGpp synthetase 4778491..4780599 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793673 YP_005202370.1 CDS Rahaq2_4492 NC_016818.1 4780605 4781303 D PFAM: SpoU rRNA Methylase family; SpoU, rRNA methylase, C-terminal; rRNA methylase 4780605..4781303 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794308 YP_005202371.1 CDS Rahaq2_4493 NC_016818.1 4781300 4783381 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG 4781300..4783381 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793674 YP_005202372.1 CDS Rahaq2_4494 NC_016818.1 4783613 4784938 D PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component; PTS system, lactose/cellobiose family IIC component 4783613..4784938 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793675 YP_005202373.1 CDS Rahaq2_4495 NC_016818.1 4784992 4786203 R PFAM: Sodium/glutamate symporter; TIGRFAM: sodium--glutamate symport carrier (gltS); sodium--glutamate symport carrier GltS complement(4784992..4786203) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793676 YP_005202374.1 CDS Rahaq2_4496 NC_016818.1 4786442 4787833 D PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease; xanthine permease 4786442..4787833 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793677 YP_005202375.1 CDS Rahaq2_4497 NC_016818.1 4787987 4789681 D PFAM: AsmA family; AsmA family protein 4787987..4789681 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793678 YP_005202376.1 CDS Rahaq2_4498 NC_016818.1 4789750 4790682 R PFAM: Putative thioesterase (yiiD_Cterm); Acetyltransferase (GNAT) family; TIGRFAM: thioesterase domain, putative; thioesterase-like protein complement(4789750..4790682) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793679 YP_005202377.1 CDS Rahaq2_4499 NC_016818.1 4790716 4791153 R PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(4790716..4791153) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793680 YP_005202378.1 CDS Rahaq2_4500 NC_016818.1 4791172 4792041 R PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); hypothetical protein complement(4791172..4792041) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793681 YP_005202379.1 CDS Rahaq2_4501 NC_016818.1 4792053 4792640 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; Epoxide hydrolase N-terminal domain-like phosphatase; haloacid dehalogenase superfamily protein complement(4792053..4792640) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793682 YP_005202380.1 CDS Rahaq2_4502 NC_016818.1 4792805 4794628 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA/BipA complement(4792805..4794628) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793683 YP_005202381.1 CDS Rahaq2_4503 NC_016818.1 4795100 4796509 D PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase, type I 4795100..4796509 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793684 YP_005202382.1 CDS Rahaq2_4504 NC_016818.1 4796750 4797799 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; signal transduction histidine kinase, nitrogen specific 4796750..4797799 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793685 YP_005202383.1 CDS Rahaq2_4505 NC_016818.1 4797807 4799219 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I); nitrogen regulation protein NR(I) 4797807..4799219 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793686 YP_005202384.1 CDS Rahaq2_4506 NC_016818.1 4799301 4800674 R PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase complement(4799301..4800674) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793687 YP_005202385.1 CDS Rahaq2_4507 NC_016818.1 4800862 4801413 R PFAM: Protein of unknown function, DUF414; hypothetical protein complement(4800862..4801413) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793688 YP_005202386.1 CDS Rahaq2_4508 NC_016818.1 4801994 4802644 D PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; ribosome biogenesis GTP-binding protein YsxC/EngB 4801994..4802644 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793689 YP_005202387.1 CDS Rahaq2_4510 NC_016818.1 4803007 4805799 R PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I complement(4803007..4805799) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793691 YP_005202388.1 CDS Rahaq2_4511 NC_016818.1 4806188 4806811 R PFAM: DSBA-like thioredoxin domain; protein-disulfide isomerase complement(4806188..4806811) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793692 YP_005202389.1 CDS Rahaq2_4512 NC_016818.1 4806857 4807843 R PFAM: Phosphotransferase enzyme family; putative homoserine kinase type II (protein kinase fold) complement(4806857..4807843) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793693 YP_005202390.1 CDS Rahaq2_4513 NC_016818.1 4807936 4808205 R PFAM: Protein of unknown function (DUF1040); hypothetical protein complement(4807936..4808205) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793694 YP_005202391.1 CDS Rahaq2_4514 NC_016818.1 4808359 4808946 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial; molybdopterin-guanine dinucleotide biosynthesis protein A 4808359..4808946 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793695 YP_005202392.1 CDS Rahaq2_4515 NC_016818.1 4808943 4809473 D PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB 4808943..4809473 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793696 YP_005202393.1 CDS Rahaq2_4520 NC_016818.1 4815227 4815916 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 4815227..4815916 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793702 YP_005202394.1 CDS Rahaq2_4521 NC_016818.1 4815899 4816909 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(4815899..4816909) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793703 YP_005202395.1 CDS Rahaq2_4522 NC_016818.1 4816910 4817839 R PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; ribokinase complement(4816910..4817839) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793704 YP_005202396.1 CDS Rahaq2_4523 NC_016818.1 4817907 4818797 R PFAM: family; sugar ABC transporter periplasmic protein complement(4817907..4818797) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793705 YP_005202397.1 CDS Rahaq2_4524 NC_016818.1 4818821 4819792 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(4818821..4819792) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793706 YP_005202398.1 CDS Rahaq2_4525 NC_016818.1 4819799 4821304 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(4819799..4821304) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794309 YP_005202399.1 CDS Rahaq2_4526 NC_016818.1 4821312 4821731 R PFAM: RbsD / FucU transport protein family; ABC-type ribose transport system, auxiliary component complement(4821312..4821731) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793708 YP_005202400.1 CDS Rahaq2_4527 NC_016818.1 4821947 4823815 R PFAM: K+ potassium transporter; TIGRFAM: potassium uptake protein; potassium uptake protein complement(4821947..4823815) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793709 YP_005202401.1 CDS Rahaq2_4528 NC_016818.1 4824083 4825591 D PFAM: Protein of unknown function (DUF3763); AAA domain (dynein-related subfamily); MoxR-like ATPase 4824083..4825591 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794311 YP_005202402.1 CDS Rahaq2_4529 NC_016818.1 4825594 4827063 D PFAM: VWA domain containing CoxE-like protein; hypothetical protein 4825594..4827063 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794312 YP_005202403.1 CDS Rahaq2_4530 NC_016818.1 4827084 4827545 D PFAM: AsnC family; transcriptional regulator 4827084..4827545 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793711 YP_005202404.1 CDS Rahaq2_4531 NC_016818.1 4827634 4828077 D PFAM: Flavodoxin; flavodoxin 4827634..4828077 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793712 YP_005202405.1 CDS Rahaq2_4532 NC_016818.1 4828457 4830346 D PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; glucose-inhibited division protein A 4828457..4830346 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794313 YP_005202406.1 CDS Rahaq2_4533 NC_016818.1 4830478 4831098 D PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 4830478..4831098 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793713 YP_005202407.1 CDS Rahaq2_4534 NC_016818.1 4831748 4832146 D PFAM: ATP synthase I chain; F0F1-type ATP synthase subunit I 4831748..4832146 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793714 YP_005202408.1 CDS Rahaq2_4535 NC_016818.1 4832169 4832951 D PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); F0F1-type ATP synthase subunit alpha 4832169..4832951 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793715 YP_005202409.1 CDS Rahaq2_4536 NC_016818.1 4833001 4833240 D PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase F0 subunit c 4833001..4833240 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793716 YP_005202410.1 CDS Rahaq2_4537 NC_016818.1 4833306 4833776 D PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase F0 subunit b 4833306..4833776 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793717 YP_005202411.1 CDS Rahaq2_4538 NC_016818.1 4833791 4834324 D PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase F1 subunit delta 4833791..4834324 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793718 YP_005202412.1 CDS Rahaq2_4539 NC_016818.1 4834337 4835878 D PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; proton translocating ATP synthase, F1 alpha subunit 4834337..4835878 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793719 YP_005202413.1 CDS Rahaq2_4540 NC_016818.1 4835950 4836813 D PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase F1 subunit gamma 4835950..4836813 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793720 YP_005202414.1 CDS Rahaq2_4541 NC_016818.1 4836846 4838228 D PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase F1 subunit beta 4836846..4838228 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793721 YP_005202415.1 CDS Rahaq2_4542 NC_016818.1 4838256 4838678 D PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase F1 subunit epsilon 4838256..4838678 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794314 YP_005202416.1 CDS Rahaq2_4543 NC_016818.1 4838787 4838966 D hypothetical protein 4838787..4838966 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793722 YP_005202417.1 CDS Rahaq2_4544 NC_016818.1 4838948 4840318 D PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4838948..4840318 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793723 YP_005202418.1 CDS Rahaq2_4545 NC_016818.1 4840451 4842280 D PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase 4840451..4842280 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794315 YP_005202419.1 CDS Rahaq2_4546 NC_016818.1 4842458 4843330 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein 4842458..4843330 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793724 YP_005202420.1 CDS Rahaq2_4547 NC_016818.1 4843547 4844587 D TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein 4843547..4844587 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793725 YP_005202421.1 CDS Rahaq2_4548 NC_016818.1 4844780 4845736 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease PstC 4844780..4845736 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794316 YP_005202422.1 CDS Rahaq2_4549 NC_016818.1 4845738 4846625 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter permease PstA 4845738..4846625 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793726 YP_005202423.1 CDS Rahaq2_4550 NC_016818.1 4846716 4847492 D PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATP-binding protein 4846716..4847492 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794317 YP_005202424.1 CDS Rahaq2_4551 NC_016818.1 4847503 4848234 D PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate transport system regulatory protein PhoU 4847503..4848234 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794318 YP_005202425.1 CDS Rahaq2_4552 NC_016818.1 4848319 4849011 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(4848319..4849011) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793727 YP_005202426.1 CDS Rahaq2_4553 NC_016818.1 4849122 4849952 D PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase 4849122..4849952 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793728 YP_005202427.1 CDS Rahaq2_4554 NC_016818.1 4849942 4850160 R hypothetical protein complement(4849942..4850160) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793729 YP_005202428.1 CDS Rahaq2_4555 NC_016818.1 4850313 4851650 D PFAM: Permease family; permease 4850313..4851650 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793730 YP_005202429.1 CDS Rahaq2_4556 NC_016818.1 4851712 4852281 R PFAM: NADPH-dependent FMN reductase; putative flavoprotein complement(4851712..4852281) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793731 YP_005202430.1 CDS Rahaq2_4557 NC_016818.1 4852373 4853098 R phosphopantetheinyl transferase complement(4852373..4853098) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794319 YP_005202431.1 CDS Rahaq2_4558 NC_016818.1 4853422 4855317 D PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 4853422..4855317 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793732 YP_005202432.1 CDS Rahaq2_4559 NC_016818.1 4855392 4856279 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(4855392..4856279) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793733 YP_005202433.1 CDS Rahaq2_4560 NC_016818.1 4856380 4856979 D PFAM: short chain dehydrogenase; dehydrogenase 4856380..4856979 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794320 YP_005202434.1 CDS Rahaq2_4561 NC_016818.1 4857051 4858415 R PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; tRNA modification GTPase TrmE complement(4857051..4858415) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793734 YP_005202435.1 CDS Rahaq2_4562 NC_016818.1 4858528 4860162 R PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; membrane protein insertase complement(4858528..4860162) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793735 YP_005202436.1 CDS Rahaq2_4563 NC_016818.1 4860165 4860422 R PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein complement(4860165..4860422) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793736 YP_005202437.1 CDS Rahaq2_4564 NC_016818.1 4860386 4860712 R PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease P protein component complement(4860386..4860712) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793737 YP_005202438.1 CDS Rahaq2_4565 NC_016818.1 4860764 4860904 R PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; IMG reference gene:2506707033_SP; 50S ribosomal protein L34 complement(4860764..4860904) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793738 YP_005202439.1 CDS Rahaq2_4995 NC_016819.1 584 1585 R PFAM: Uncharacterized protein conserved in bacteria (DUF2186); hypothetical protein complement(584..1585) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789753 YP_005202440.1 CDS Rahaq2_4996 NC_016819.1 1582 1749 R hypothetical protein complement(1582..1749) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789754 YP_005202441.1 CDS Rahaq2_4997 NC_016819.1 2464 2739 R hypothetical protein complement(2464..2739) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789755 YP_005202442.1 CDS Rahaq2_4998 NC_016819.1 2739 3374 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase complement(2739..3374) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789756 YP_005202443.1 CDS Rahaq2_5000 NC_016819.1 4092 4499 R hypothetical protein complement(4092..4499) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789758 YP_005202444.1 CDS Rahaq2_5001 NC_016819.1 4660 5610 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 4660..5610 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789759 YP_005202445.1 CDS Rahaq2_5002 NC_016819.1 6252 7301 R PFAM: Initiator Replication protein; Initiator Replication protein complement(6252..7301) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789760 YP_005202446.1 CDS Rahaq2_5003 NC_016819.1 8095 8802 R acetyltransferase, ribosomal protein N-acetylase complement(8095..8802) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789761 YP_005202447.1 CDS Rahaq2_5004 NC_016819.1 8877 9251 R hypothetical protein complement(8877..9251) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789762 YP_005202448.1 CDS Rahaq2_5007 NC_016819.1 10255 11262 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(10255..11262) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789646 YP_005202449.1 CDS Rahaq2_5008 NC_016819.1 11507 12748 D PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter; oligosaccharide:H+ symporter 11507..12748 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789647 YP_005202450.1 CDS Rahaq2_5009 NC_016819.1 12767 14200 D PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain; TIGRFAM: sucrose-6-phosphate hydrolase; sucrose-6-phosphate hydrolase 12767..14200 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789648 YP_005202451.1 CDS Rahaq2_5010 NC_016819.1 14323 15675 D hypothetical protein 14323..15675 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789649 YP_005202452.1 CDS Rahaq2_5011 NC_016819.1 15743 16300 D PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats); acetyltransferase 15743..16300 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789650 YP_005202453.1 CDS Rahaq2_5012 NC_016819.1 16342 16665 R hypothetical protein complement(16342..16665) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789651 YP_005202454.1 CDS Rahaq2_5013 NC_016819.1 16980 17867 D hypothetical protein 16980..17867 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789652 YP_005202455.1 CDS Rahaq2_5014 NC_016819.1 18132 18917 R PFAM: MltA-interacting protein MipA; outer membrane protein V complement(18132..18917) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789653 YP_005202456.1 CDS Rahaq2_5015 NC_016819.1 19237 20379 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 19237..20379 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789654 YP_005202457.1 CDS Rahaq2_5016 NC_016819.1 20454 23450 D PFAM: AcrB/AcrD/AcrF family; cation/multidrug efflux pump 20454..23450 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789655 YP_005202458.1 CDS Rahaq2_5017 NC_016819.1 23631 23798 R PFAM: Stress-induced bacterial acidophilic repeat motif; stress-induced acidophilic repeat motif-containing protein complement(23631..23798) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789656 YP_005202459.1 CDS Rahaq2_5018 NC_016819.1 24142 24630 D PFAM: Domain of unknown function (DUF892); hypothetical protein 24142..24630 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789657 YP_005202460.1 CDS Rahaq2_5019 NC_016819.1 24693 25208 D PFAM: Domain of unknown function (DUF892); hypothetical protein 24693..25208 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789658 YP_005202461.1 CDS Rahaq2_5020 NC_016819.1 25284 25793 R PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; competence/damage-inducible protein CinA-like protein complement(25284..25793) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789659 YP_005202462.1 CDS Rahaq2_5022 NC_016819.1 26338 26601 D PFAM: Sodium/hydrogen exchanger family; Sodium/hydrogen exchanger family 26338..26601 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789661 YP_005202463.1 CDS Rahaq2_5023 NC_016819.1 26618 28246 D PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase; glycosidase 26618..28246 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789662 YP_005202464.1 CDS Rahaq2_5024 NC_016819.1 28269 29235 R PFAM: short chain dehydrogenase; manually curated; short-chain alcohol dehydrogenase complement(join(28269..29096,29095..29235)) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789663 YP_005202465.1 CDS Rahaq2_5025 NC_016819.1 29320 30225 R PFAM: Manganese containing catalase; Mn-containing catalase complement(29320..30225) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789664 YP_005202466.1 CDS Rahaq2_5026 NC_016819.1 30380 30751 R PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein; death-on-curing family protein complement(30380..30751) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789665 YP_005202467.1 CDS Rahaq2_5027 NC_016819.1 30748 30969 R PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(30748..30969) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789666 YP_005202468.1 CDS Rahaq2_5028 NC_016819.1 31093 31761 D hypothetical protein 31093..31761 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789667 YP_005202469.1 CDS Rahaq2_5029 NC_016819.1 32009 33409 R PFAM: Amino acid permease; amino acid transporter complement(32009..33409) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789668 YP_005202470.1 CDS Rahaq2_5030 NC_016819.1 33549 34364 R hypothetical protein complement(33549..34364) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789669 YP_005202471.1 CDS Rahaq2_5031 NC_016819.1 34543 35682 D PFAM: Ornithine cyclodeaminase/mu-crystallin family; putative ornithine cyclodeaminase, mu-crystallin 34543..35682 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789670 YP_005202472.1 CDS Rahaq2_5032 NC_016819.1 35736 36158 D PFAM: Endoribonuclease L-PSP; putative translation initiation inhibitor, yjgF family 35736..36158 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789671 YP_005202473.1 CDS Rahaq2_5033 NC_016819.1 36212 37504 D PFAM: FAD dependent oxidoreductase; glycine/D-amino acid oxidase, deaminating 36212..37504 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789672 YP_005202474.1 CDS Rahaq2_5035 NC_016819.1 37994 39241 R PFAM: Levansucrase/Invertase; Levansucrase/Invertase complement(37994..39241) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789674 YP_005202475.1 CDS Rahaq2_5036 NC_016819.1 39882 40094 D PFAM: Ogr/Delta-like zinc finger; Ogr/Delta-like zinc finger 39882..40094 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789675 YP_005202476.1 CDS Rahaq2_5037 NC_016819.1 40613 41503 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(40613..41503) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789676 YP_005202477.1 CDS Rahaq2_5038 NC_016819.1 41608 42402 D PFAM: short chain dehydrogenase; dehydrogenase 41608..42402 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789677 YP_005202478.1 CDS Rahaq2_5039 NC_016819.1 42479 43588 R PFAM: Epoxide hydrolase N terminus; alpha/beta hydrolase complement(42479..43588) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789678 YP_005202479.1 CDS Rahaq2_5040 NC_016819.1 43640 45202 R PFAM: Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(43640..45202) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789679 YP_005202480.1 CDS Rahaq2_5041 NC_016819.1 45418 45942 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(45418..45942) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789680 YP_005202481.1 CDS Rahaq2_5042 NC_016819.1 45946 46215 R PFAM: Protein of unknown function (DUF1778); hypothetical protein complement(45946..46215) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789681 YP_005202482.1 CDS Rahaq2_5043 NC_016819.1 46471 46770 D PFAM: Transposase; transposase 46471..46770 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789682 YP_005202483.1 CDS Rahaq2_5044 NC_016819.1 46830 47363 R hypothetical protein complement(46830..47363) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789683 YP_005202484.1 CDS Rahaq2_5045 NC_016819.1 47415 47786 R hypothetical protein complement(47415..47786) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789684 YP_005202485.1 CDS Rahaq2_5047 NC_016819.1 48472 50007 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein; EmrB/QacA subfamily drug resistance transporter complement(48472..50007) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789686 YP_005202486.1 CDS Rahaq2_5048 NC_016819.1 50018 51196 R PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A); multidrug resistance efflux pump complement(50018..51196) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789687 YP_005202487.1 CDS Rahaq2_5049 NC_016819.1 51221 51676 R PFAM: MarR family; transcriptional regulator complement(51221..51676) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789688 YP_005202488.1 CDS Rahaq2_5051 NC_016819.1 52604 53653 D PFAM: Phage integrase family; site-specific recombinase XerD 52604..53653 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789690 YP_005202489.1 CDS Rahaq2_5052 NC_016819.1 53743 54222 R hypothetical protein complement(53743..54222) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789691 YP_005202490.1 CDS Rahaq2_5053 NC_016819.1 54219 54479 R PFAM: Protein of unknown function (DUF1778); hypothetical protein complement(54219..54479) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789692 YP_005202491.1 CDS Rahaq2_5055 NC_016819.1 54906 55511 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(54906..55511) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789694 YP_005202492.1 CDS Rahaq2_5057 NC_016819.1 55667 56488 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(55667..56488) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789696 YP_005202493.1 CDS Rahaq2_5058 NC_016819.1 56622 57377 R hypothetical protein complement(56622..57377) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789697 YP_005202494.1 CDS Rahaq2_5059 NC_016819.1 57533 58213 R PFAM: DJ-1/PfpI family; putative intracellular protease/amidase complement(57533..58213) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789698 YP_005202495.1 CDS Rahaq2_5060 NC_016819.1 58542 59957 R PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase complement(58542..59957) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789699 YP_005202496.1 CDS Rahaq2_5061 NC_016819.1 60057 60869 R PFAM: Helix-turn-helix; putative transcriptional regulator complement(60057..60869) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789700 YP_005202497.1 CDS Rahaq2_5063 NC_016819.1 61254 62177 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(61254..62177) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789702 YP_005202498.1 CDS Rahaq2_5064 NC_016819.1 62331 63029 D PFAM: Glutathione S-transferase, C-terminal domain; glutathione S-transferase 62331..63029 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789703 YP_005202499.1 CDS Rahaq2_5065 NC_016819.1 63296 66280 R PFAM: Transposase; transposase, TnpA family complement(63296..66280) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789704 YP_005202500.1 CDS Rahaq2_5066 NC_016819.1 66440 67024 D PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase; site-specific recombinase, DNA invertase Pin 66440..67024 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789705 YP_005202501.1 CDS Rahaq2_5067 NC_016819.1 67137 67706 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(67137..67706) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789706 YP_005202502.1 CDS Rahaq2_5068 NC_016819.1 67812 68648 R PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/carnithine racemase complement(67812..68648) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789707 YP_005202503.1 CDS Rahaq2_5069 NC_016819.1 69400 69726 R hypothetical protein complement(69400..69726) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789708 YP_005202504.1 CDS Rahaq2_5070 NC_016819.1 69970 70122 D hypothetical protein 69970..70122 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789709 YP_005202505.1 CDS Rahaq2_5071 NC_016819.1 70481 73453 D PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; formate dehydrogenase, alpha subunit, archaeal-type 70481..73453 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789710 YP_005202506.1 CDS Rahaq2_5072 NC_016819.1 73453 73944 D PFAM: Protein of unknown function (DUF1641); hypothetical protein 73453..73944 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789711 YP_005202507.1 CDS Rahaq2_5073 NC_016819.1 73937 75304 D PFAM: Bacterial Cytochrome Ubiquinol Oxidase; cytochrome bd-type quinol oxidase subunit 1 73937..75304 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789712 YP_005202508.1 CDS Rahaq2_5074 NC_016819.1 75315 76274 D PFAM: Cytochrome oxidase subunit II; cytochrome bd-type quinol oxidase, subunit 2 75315..76274 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789713 YP_005202509.1 CDS Rahaq2_5075 NC_016819.1 76467 76592 D hypothetical protein 76467..76592 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789714 YP_005202510.1 CDS Rahaq2_5076 NC_016819.1 76870 77037 D PFAM: Stress-induced bacterial acidophilic repeat motif; stress-induced acidophilic repeat motif-containing protein 76870..77037 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789715 YP_005202511.1 CDS Rahaq2_5077 NC_016819.1 77280 78638 R hypothetical protein complement(77280..78638) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789716 YP_005202512.1 CDS Rahaq2_5078 NC_016819.1 78722 80143 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; Na+/melibiose symporter-like transporter complement(78722..80143) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789717 YP_005202513.1 CDS Rahaq2_5079 NC_016819.1 80270 81280 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(80270..81280) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789718 YP_005202514.1 CDS Rahaq2_5080 NC_016819.1 81446 81787 R PFAM: HxlR-like helix-turn-helix; putative transcriptional regulator complement(81446..81787) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789719 YP_005202515.1 CDS Rahaq2_5081 NC_016819.1 81937 82920 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zn-dependent oxidoreductase 81937..82920 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789720 YP_005202516.1 CDS Rahaq2_5082 NC_016819.1 83021 83296 R hypothetical protein complement(83021..83296) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789721 YP_005202517.1 CDS Rahaq2_5083 NC_016819.1 83490 84869 R PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II; transcriptional regulator with HTH domain and aminotransferase domain complement(83490..84869) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789722 YP_005202518.1 CDS Rahaq2_5084 NC_016819.1 85015 85494 D PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; alkylhydroperoxidase 85015..85494 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789723 YP_005202519.1 CDS Rahaq2_5085 NC_016819.1 85681 86694 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(85681..86694) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789724 YP_005202520.1 CDS Rahaq2_5086 NC_016819.1 86725 87561 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 86725..87561 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789725 YP_005202521.1 CDS Rahaq2_5087 NC_016819.1 87561 88904 D PFAM: Amidase; amidase 87561..88904 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789726 YP_005202522.1 CDS Rahaq2_5088 NC_016819.1 89197 89820 R PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable FMN-dependent enzyme, DR_2398 family; PPOX class F420-dependent protein complement(89197..89820) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789727 YP_005202523.1 CDS Rahaq2_5089 NC_016819.1 90091 90879 D hypothetical protein 90091..90879 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789728 YP_005202524.1 CDS Rahaq2_5091 NC_016819.1 91483 95007 D PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 91483..95007 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789730 YP_005202525.1 CDS Rahaq2_5092 NC_016819.1 95073 95606 D PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin, long chain 95073..95606 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789731 YP_005202526.1 CDS Rahaq2_5093 NC_016819.1 95743 96258 R PFAM: NifQ; protein NifQ complement(95743..96258) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789732 YP_005202527.1 CDS Rahaq2_5094 NC_016819.1 96258 97652 R PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB complement(96258..97652) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789733 YP_005202528.1 CDS Rahaq2_5095 NC_016819.1 97846 99402 R PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein; Nif-specific regulatory protein complement(97846..99402) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789734 YP_005202529.1 CDS Rahaq2_5096 NC_016819.1 99399 100886 R PFAM: PAS fold; TIGRFAM: PAS domain S-box; nitrogen fixation negative regulator NifL; nitrogen fixation negative regulator NifL complement(99399..100886) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789735 YP_005202530.1 CDS Rahaq2_5097 NC_016819.1 101189 101983 R PFAM: PPIC-type PPIASE domain; TIGRFAM: nitrogen fixation protein NifM; nitrogen fixation protein NifM complement(101189..101983) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789736 YP_005202531.1 CDS Rahaq2_5098 NC_016819.1 101980 102423 R PFAM: NifZ domain; NifZ domain-containing protein complement(101980..102423) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789737 YP_005202532.1 CDS Rahaq2_5099 NC_016819.1 102420 102758 R PFAM: Nitrogen fixation protein NifW; Nitrogen fixation protein NifW complement(102420..102758) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789738 YP_005202533.1 CDS Rahaq2_5100 NC_016819.1 102760 103962 R PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; homocitrate synthase NifV complement(102760..103962) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789739 YP_005202534.1 CDS Rahaq2_5101 NC_016819.1 103978 105183 R PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase NifS complement(103978..105183) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789740 YP_005202535.1 CDS Rahaq2_5102 NC_016819.1 105229 106056 R PFAM: NifU-like N terminal domain; BFD-like [2Fe-2S] binding domain; NifU-like domain; TIGRFAM: Fe-S cluster assembly protein NifU; Fe-S cluster assembly protein NifU complement(105229..106056) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789741 YP_005202536.1 CDS Rahaq2_5103 NC_016819.1 106074 106412 R hypothetical protein complement(106074..106412) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789742 YP_005202537.1 CDS Rahaq2_5104 NC_016819.1 106567 107031 R PFAM: Dinitrogenase iron-molybdenum cofactor; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(106567..107031) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789743 YP_005202538.1 CDS Rahaq2_5105 NC_016819.1 107018 108403 R PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN complement(107018..108403) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789744 YP_005202539.1 CDS Rahaq2_5106 NC_016819.1 108453 109826 R PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; nitrogenase molybdenum-iron cofactor biosynthesis protein NifE complement(108453..109826) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789745 YP_005202540.1 CDS Rahaq2_5107 NC_016819.1 109998 110672 R PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(109998..110672) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789746 YP_005202541.1 CDS Rahaq2_5108 NC_016819.1 110687 110902 R PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT; putative nitrogen fixation protein FixT complement(110687..110902) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789747 YP_005202542.1 CDS Rahaq2_5109 NC_016819.1 110978 112546 R PFAM: Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; nitrogenase molybdenum-iron protein subunit beta complement(110978..112546) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789748 YP_005202543.1 CDS Rahaq2_5110 NC_016819.1 112603 114051 R PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain; nitrogenase molybdenum-iron protein subunit alpha complement(112603..114051) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789749 YP_005202544.1 CDS Rahaq2_5111 NC_016819.1 114125 115000 R PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; nitrogenase subunit NifH (ATPase) complement(114125..115000) Rahnella aquatilis CIP 78.65 = ATCC 33071 11789750 YP_005220307.1 CDS Rahaq2_4567 NC_016835.1 22 2739 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family; manually curated; type VI secretion ATPase, ClpV1 family 22..2739 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818502 YP_005220308.1 CDS Rahaq2_4568 NC_016835.1 2739 5126 D PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; Rhs element Vgr protein 2739..5126 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818503 YP_005220309.1 CDS Rahaq2_4569 NC_016835.1 5143 7794 D PFAM: Chitinase class I; putative chitinase 5143..7794 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818504 YP_005220310.1 CDS Rahaq2_4570 NC_016835.1 7796 8731 D hypothetical protein 7796..8731 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818505 YP_005220311.1 CDS Rahaq2_4572 NC_016835.1 9315 9830 D hypothetical protein 9315..9830 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818507 YP_005220312.1 CDS Rahaq2_4573 NC_016835.1 9847 11844 D hypothetical protein 9847..11844 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818508 YP_005220313.1 CDS Rahaq2_4574 NC_016835.1 12145 12621 D hypothetical protein 12145..12621 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818509 YP_005220314.1 CDS Rahaq2_4575 NC_016835.1 12812 13252 D hypothetical protein 12812..13252 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818510 YP_005220315.1 CDS Rahaq2_4576 NC_016835.1 13273 15705 D PFAM: Chitinase class I; putative chitinase 13273..15705 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818511 YP_005220316.1 CDS Rahaq2_4577 NC_016835.1 15702 16244 D hypothetical protein 15702..16244 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818512 YP_005220317.1 CDS Rahaq2_4578 NC_016835.1 16428 18251 D hypothetical protein 16428..18251 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818087 YP_005220318.1 CDS Rahaq2_4579 NC_016835.1 18251 18622 D PFAM: Protein of unknown function (DUF1311); hypothetical protein 18251..18622 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818088 YP_005220319.1 CDS Rahaq2_4581 NC_016835.1 19315 19557 D hypothetical protein 19315..19557 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818090 YP_005220320.1 CDS Rahaq2_4582 NC_016835.1 19621 19884 D PFAM: PAAR motif; hypothetical protein 19621..19884 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818091 YP_005220321.1 CDS Rahaq2_4583 NC_016835.1 19887 21089 D hypothetical protein 19887..21089 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818092 YP_005220322.1 CDS Rahaq2_4584 NC_016835.1 21086 24502 D PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; hypothetical protein 21086..24502 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818093 YP_005220323.1 CDS Rahaq2_4585 NC_016835.1 24602 26371 D PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family; type VI secretion protein 24602..26371 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818094 YP_005220324.1 CDS Rahaq2_4586 NC_016835.1 26335 27417 D PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family; type VI secretion protein 26335..27417 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818095 YP_005220325.1 CDS Rahaq2_4587 NC_016835.1 27481 28023 D TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; type VI secretion lipoprotein 27481..28023 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818096 YP_005220326.1 CDS Rahaq2_4588 NC_016835.1 28036 30391 D PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; manually curated; Rhs element Vgr protein join(28036..29919,29921..30391) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818097 YP_005220327.1 CDS Rahaq2_4589 NC_016835.1 30412 30897 D manually curated; hypothetical protein 30412..30897 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818098 YP_005220328.1 CDS Rahaq2_4590 NC_016835.1 30926 31282 D hypothetical protein 30926..31282 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818099 YP_005220329.1 CDS Rahaq2_4591 NC_016835.1 31275 31946 D hypothetical protein 31275..31946 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818100 YP_005220330.1 CDS Rahaq2_4592 NC_016835.1 31955 32647 D hypothetical protein 31955..32647 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818101 YP_005220331.1 CDS Rahaq2_4595 NC_016835.1 33642 35246 D PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; type VI secretion-associated protein 33642..35246 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818104 YP_005220332.1 CDS Rahaq2_4596 NC_016835.1 35265 35696 D PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein; type VI secretion system lysozyme-like protein 35265..35696 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818105 YP_005220333.1 CDS Rahaq2_4597 NC_016835.1 35857 36666 D PFAM: Protein of unknown function (DUF1311); hypothetical protein 35857..36666 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818106 YP_005220334.1 CDS Rahaq2_4598 NC_016835.1 36749 38146 D PFAM: ImpA-related N-terminal; ImpA domain protein; hypothetical protein 36749..38146 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818107 YP_005220335.1 CDS Rahaq2_4599 NC_016835.1 38212 38682 D hypothetical protein 38212..38682 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818108 YP_005220336.1 CDS Rahaq2_4600 NC_016835.1 39230 40654 D PFAM: Bacterial Cytochrome Ubiquinol Oxidase; cytochrome bd-type quinol oxidase subunit 1 39230..40654 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818109 YP_005220337.1 CDS Rahaq2_4601 NC_016835.1 40657 41664 D PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); cytochrome d oxidase cyd subunit II 40657..41664 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818110 YP_005220338.1 CDS Rahaq2_4602 NC_016835.1 41676 41840 D PFAM: Protein of unknown function (DUF2474); hypothetical protein 41676..41840 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818111 YP_005220339.1 CDS Rahaq2_4603 NC_016835.1 42034 43548 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(42034..43548) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818112 YP_005220340.1 CDS Rahaq2_4604 NC_016835.1 43529 44578 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(43529..44578) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818113 YP_005220341.1 CDS Rahaq2_4605 NC_016835.1 44562 45539 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(44562..45539) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818114 YP_005220342.1 CDS Rahaq2_4606 NC_016835.1 45536 46396 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(45536..46396) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818115 YP_005220343.1 CDS Rahaq2_4607 NC_016835.1 46393 47331 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(46393..47331) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818116 YP_005220344.1 CDS Rahaq2_4608 NC_016835.1 47560 48315 D PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 47560..48315 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818117 YP_005220345.1 CDS Rahaq2_4609 NC_016835.1 48406 49305 D PFAM: alpha/beta hydrolase fold; TIGRFAM: proline-specific peptidases, Bacillus coagulans-type subfamily; proline-specific peptidase 48406..49305 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818118 YP_005220346.1 CDS Rahaq2_4610 NC_016835.1 49384 50370 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(49384..50370) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818119 YP_005220347.1 CDS Rahaq2_4611 NC_016835.1 50431 51669 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 50431..51669 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818120 YP_005220348.1 CDS Rahaq2_4612 NC_016835.1 52204 53637 D PFAM: Bacterial Cytochrome Ubiquinol Oxidase; cytochrome bd-type quinol oxidase subunit 1 52204..53637 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818121 YP_005220349.1 CDS Rahaq2_4613 NC_016835.1 53630 54634 D PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); cytochrome d oxidase cyd subunit II 53630..54634 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818122 YP_005220350.1 CDS Rahaq2_4614 NC_016835.1 54696 54845 D PFAM: Protein of unknown function (DUF2474); hypothetical protein 54696..54845 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818123 YP_005220351.1 CDS Rahaq2_4615 NC_016835.1 54874 55635 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(54874..55635) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818124 YP_005220352.1 CDS Rahaq2_4616 NC_016835.1 55859 56599 D PFAM: short chain dehydrogenase; dehydrogenase 55859..56599 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818125 YP_005220353.1 CDS Rahaq2_4617 NC_016835.1 56663 57505 D PFAM: Fumarylacetoacetate (FAA) hydrolase family; 2-keto-4-pentenoate hydratase 56663..57505 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818126 YP_005220354.1 CDS Rahaq2_4618 NC_016835.1 57532 58809 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; L-alanine-DL-glutamate epimerase-like protein 57532..58809 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818127 YP_005220355.1 CDS Rahaq2_4619 NC_016835.1 58838 59704 D PFAM: Amidohydrolase; COG3618; putative TIM-barrel fold metal-dependent hydrolase 58838..59704 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818128 YP_005220356.1 CDS Rahaq2_4620 NC_016835.1 59682 60458 D PFAM: short chain dehydrogenase; dehydrogenase 59682..60458 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818129 YP_005220357.1 CDS Rahaq2_4621 NC_016835.1 60455 60799 D PFAM: Domain of unknown function (DUF718); hypothetical protein 60455..60799 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818130 YP_005220358.1 CDS Rahaq2_4622 NC_016835.1 61093 62331 D PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease; L-fucose:H+ symporter permease 61093..62331 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818131 YP_005220359.1 CDS Rahaq2_4624 NC_016835.1 62963 63946 D PFAM: Domain of unknown function (DUF1852); hypothetical protein 62963..63946 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818133 YP_005220360.1 CDS Rahaq2_4625 NC_016835.1 63978 65009 D PFAM: Cobalamin-independent synthase, Catalytic domain; methionine synthase II (cobalamin-independent) 63978..65009 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818134 YP_005220361.1 CDS Rahaq2_4626 NC_016835.1 65157 65885 R PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-S-sulfoxide reductase complement(65157..65885) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818135 YP_005220362.1 CDS Rahaq2_4627 NC_016835.1 65904 66410 R PFAM: SelR domain; TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase complement(65904..66410) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818136 YP_005220363.1 CDS Rahaq2_4628 NC_016835.1 67137 69176 R PFAM: Glycosyl hydrolases family 31; family 31 glycosyl hydrolase, alpha-glucosidase complement(67137..69176) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818137 YP_005220364.1 CDS Rahaq2_4629 NC_016835.1 69173 70552 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; glycoside/pentoside/hexuronide transporter complement(69173..70552) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818138 YP_005220365.1 CDS Rahaq2_4630 NC_016835.1 70919 71401 D PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector 70919..71401 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818139 YP_005220366.1 CDS Rahaq2_4631 NC_016835.1 71398 71873 D PFAM: Protein of unknown function (DUF2778); manually curated; hypothetical protein join(71398..71577,71577..71873) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818140 YP_005220367.1 CDS Rahaq2_4632 NC_016835.1 71873 72115 D hypothetical protein 71873..72115 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818141 YP_005220368.1 CDS Rahaq2_4633 NC_016835.1 72164 72490 D PFAM: Protein of unknown function (DUF1493); hypothetical protein 72164..72490 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818142 YP_005220369.1 CDS Rahaq2_4634 NC_016835.1 72759 73292 D PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; isopentenyl-diphosphate delta-isomerase 72759..73292 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818143 YP_005220370.1 CDS Rahaq2_4635 NC_016835.1 73245 73781 R PFAM: Shikimate kinase; adenylate kinase-like kinase complement(73245..73781) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818144 YP_005220371.1 CDS Rahaq2_4636 NC_016835.1 74287 74544 D PFAM: Biofilm development protein YmgB/AriR; Biofilm development protein YmgB/AriR 74287..74544 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818145 YP_005220372.1 CDS Rahaq2_4637 NC_016835.1 74604 75461 R PFAM: NmrA-like family; putative nucleoside-diphosphate sugar epimerase complement(74604..75461) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818146 YP_005220373.1 CDS Rahaq2_4638 NC_016835.1 75576 75992 D PFAM: HxlR-like helix-turn-helix; putative transcriptional regulator 75576..75992 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818147 YP_005220374.1 CDS Rahaq2_4639 NC_016835.1 76111 76677 D PFAM: Antibiotic biosynthesis monooxygenase; hypothetical protein 76111..76677 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818148 YP_005220375.1 CDS Rahaq2_4640 NC_016835.1 76692 78572 D PFAM: Amidohydrolase family; putative TIM-barrel fold metal-dependent hydrolase 76692..78572 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818149 YP_005220376.1 CDS Rahaq2_4641 NC_016835.1 78699 79607 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 78699..79607 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818150 YP_005220377.1 CDS Rahaq2_4642 NC_016835.1 79683 80510 D PFAM: EamA-like transporter family; hypothetical protein 79683..80510 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818151 YP_005220378.1 CDS Rahaq2_4643 NC_016835.1 80531 81421 D PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 80531..81421 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818152 YP_005220379.1 CDS Rahaq2_4644 NC_016835.1 81486 82244 R PFAM: YdjC-like protein; hypothetical protein complement(81486..82244) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818153 YP_005220380.1 CDS Rahaq2_4645 NC_016835.1 82290 83633 R PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain; family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase complement(82290..83633) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818154 YP_005220381.1 CDS Rahaq2_4646 NC_016835.1 83694 84530 R PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(83694..84530) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818155 YP_005220382.1 CDS Rahaq2_4647 NC_016835.1 84545 84892 R PFAM: PTS system, Lactose/Cellobiose specific IIA subunit; TIGRFAM: phosphotransferase system enzyme II, lactose-specific, factor III; PTS system cellobiose-specific transporter subunit IIA complement(84545..84892) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818156 YP_005220383.1 CDS Rahaq2_4648 NC_016835.1 84956 86314 R PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component; PTS system cellobiose-specific transporter subunit IIC complement(84956..86314) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818157 YP_005220384.1 CDS Rahaq2_4649 NC_016835.1 86437 86757 R PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component; PTS system cellobiose-specific transporter subunit IIB complement(86437..86757) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818158 YP_005220385.1 CDS Rahaq2_4650 NC_016835.1 87104 88138 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 87104..88138 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818159 YP_005220386.1 CDS Rahaq2_4651 NC_016835.1 88666 89391 D hypothetical protein 88666..89391 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818160 YP_005220387.1 CDS Rahaq2_4652 NC_016835.1 89437 91206 D PFAM: GMC oxidoreductase; choline dehydrogenase-like flavoprotein 89437..91206 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818161 YP_005220388.1 CDS Rahaq2_4653 NC_016835.1 91222 92493 D PFAM: Cytochrome c; cytochrome c, mono- and diheme variants family 91222..92493 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818162 YP_005220389.1 CDS Rahaq2_4654 NC_016835.1 92550 92939 R hypothetical protein complement(92550..92939) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818163 YP_005220390.1 CDS Rahaq2_4655 NC_016835.1 92936 94324 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; arabinose efflux permease family protein complement(92936..94324) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818164 YP_005220391.1 CDS Rahaq2_4656 NC_016835.1 94441 95355 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 94441..95355 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818165 YP_005220392.1 CDS Rahaq2_4657 NC_016835.1 95384 95926 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 95384..95926 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818166 YP_005220393.1 CDS Rahaq2_4658 NC_016835.1 96095 96334 D hypothetical protein 96095..96334 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818167 YP_005220394.1 CDS Rahaq2_4659 NC_016835.1 96518 96811 D hypothetical protein 96518..96811 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818168 YP_005220395.1 CDS Rahaq2_4660 NC_016835.1 96756 97127 D PFAM: Biofilm development protein YmgB/AriR; Biofilm development protein YmgB/AriR 96756..97127 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818169 YP_005220396.1 CDS Rahaq2_4661 NC_016835.1 97227 97484 D PFAM: Biofilm development protein YmgB/AriR; Biofilm development protein YmgB/AriR 97227..97484 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818170 YP_005220397.1 CDS Rahaq2_4662 NC_016835.1 97596 98837 R PFAM: EAL domain; Sensors of blue-light using FAD; EAL domain-containing protein complement(97596..98837) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818171 YP_005220398.1 CDS Rahaq2_4663 NC_016835.1 99041 99640 D PFAM: Tellurite resistance protein TehB; TIGRFAM: tellurite resistance protein TehB; tellurite resistance protein TehB 99041..99640 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818172 YP_005220399.1 CDS Rahaq2_4664 NC_016835.1 99723 99995 D PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein 99723..99995 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818173 YP_005220400.1 CDS Rahaq2_4665 NC_016835.1 100157 100354 R hypothetical protein complement(100157..100354) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818174 YP_005220401.1 CDS Rahaq2_4666 NC_016835.1 100535 102934 D PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain; phosphoketolase 100535..102934 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818175 YP_005220402.1 CDS Rahaq2_4667 NC_016835.1 103139 103570 R PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily; OsmC subfamily peroxiredoxin complement(103139..103570) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818176 YP_005220403.1 CDS Rahaq2_4668 NC_016835.1 103705 103884 D hypothetical protein 103705..103884 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818177 YP_005220404.1 CDS Rahaq2_4669 NC_016835.1 104012 104347 D hypothetical protein 104012..104347 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818178 YP_005220405.1 CDS Rahaq2_4670 NC_016835.1 104487 104945 R PFAM: Transposase IS200 like; transposase complement(104487..104945) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818179 YP_005220406.1 CDS Rahaq2_4672 NC_016835.1 105148 105960 R PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; lipoprotein complement(105148..105960) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818181 YP_005220407.1 CDS Rahaq2_4673 NC_016835.1 106204 107415 R PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein complement(106204..107415) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818182 YP_005220408.1 CDS Rahaq2_4674 NC_016835.1 107727 108062 R PFAM: Small Multidrug Resistance protein; cation/cationic drug transporter complement(107727..108062) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818183 YP_005220409.1 CDS Rahaq2_4675 NC_016835.1 108256 110055 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain complement(108256..110055) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818184 YP_005220410.1 CDS Rahaq2_4676 NC_016835.1 110058 110975 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(110058..110975) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818185 YP_005220411.1 CDS Rahaq2_4677 NC_016835.1 110975 111949 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(110975..111949) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818186 YP_005220412.1 CDS Rahaq2_4678 NC_016835.1 111946 112920 R PFAM: Inosine-uridine preferring nucleoside hydrolase; Inosine-uridine nucleoside N-ribohydrolase complement(111946..112920) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818187 YP_005220413.1 CDS Rahaq2_4679 NC_016835.1 112925 113875 R PFAM: Inosine-uridine preferring nucleoside hydrolase; Inosine-uridine nucleoside N-ribohydrolase complement(112925..113875) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818188 YP_005220414.1 CDS Rahaq2_4680 NC_016835.1 113872 114756 R PFAM: Dihydrodipicolinate synthetase family; dihydrodipicolinate synthase/N-acetylneuraminate lyase complement(113872..114756) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818189 YP_005220415.1 CDS Rahaq2_4681 NC_016835.1 114838 116397 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(114838..116397) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818190 YP_005220416.1 CDS Rahaq2_4682 NC_016835.1 116539 117426 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 116539..117426 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818191 YP_005220417.1 CDS Rahaq2_4683 NC_016835.1 117823 120312 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; membrane-bound PQQ-dependent dehydrogenase 117823..120312 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818192 YP_005220418.1 CDS Rahaq2_4684 NC_016835.1 120372 121667 R PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain; HipA domain-containing protein complement(120372..121667) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818193 YP_005220419.1 CDS Rahaq2_4685 NC_016835.1 121671 121922 R PFAM: Helix-turn-helix; Helix-turn-helix protein complement(121671..121922) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818194 YP_005220420.1 CDS Rahaq2_4686 NC_016835.1 122175 122885 D PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator 122175..122885 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818195 YP_005220421.1 CDS Rahaq2_4687 NC_016835.1 122891 124090 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; L-alanine-DL-glutamate epimerase-like protein complement(122891..124090) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818196 YP_005220422.1 CDS Rahaq2_4688 NC_016835.1 124400 125815 D PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; manually curated; glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component 124400..125815 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818197 YP_005220423.1 CDS Rahaq2_4689 NC_016835.1 125822 126694 R PFAM: Fumarylacetoacetate (FAA) hydrolase family; 2-keto-4-pentenoate hydratase complement(125822..126694) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818198 YP_005220424.1 CDS Rahaq2_4690 NC_016835.1 126853 127776 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 126853..127776 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818199 YP_005220425.1 CDS Rahaq2_4691 NC_016835.1 127795 128760 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(127795..128760) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818200 YP_005220426.1 CDS Rahaq2_4692 NC_016835.1 128757 129761 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(128757..129761) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818201 YP_005220427.1 CDS Rahaq2_4693 NC_016835.1 129758 130705 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(129758..130705) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818202 YP_005220428.1 CDS Rahaq2_4694 NC_016835.1 130705 131664 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(130705..131664) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818203 YP_005220429.1 CDS Rahaq2_4695 NC_016835.1 131716 133428 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(131716..133428) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818204 YP_005220430.1 CDS Rahaq2_4696 NC_016835.1 133759 133980 R PFAM: Ogr/Delta-like zinc finger; manually curated; Ogr/Delta-like zinc finger complement(133759..133980) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818205 YP_005220431.1 CDS Rahaq2_4698 NC_016835.1 134604 136040 R PFAM: SEFIR domain; SEFIR domain-containing protein complement(134604..136040) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818207 YP_005220432.1 CDS Rahaq2_4699 NC_016835.1 136193 136327 R hypothetical protein complement(136193..136327) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818208 YP_005220433.1 CDS Rahaq2_4700 NC_016835.1 136517 136705 R hypothetical protein complement(136517..136705) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818209 YP_005220434.1 CDS Rahaq2_4701 NC_016835.1 136918 137409 D PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector 136918..137409 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818210 YP_005220435.1 CDS Rahaq2_4702 NC_016835.1 137422 137778 D manually curated; hypothetical protein 137422..137778 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818211 YP_005220436.1 CDS Rahaq2_4703 NC_016835.1 137775 138281 D hypothetical protein 137775..138281 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818212 YP_005220437.1 CDS Rahaq2_4705 NC_016835.1 139994 140980 R PFAM: Initiator Replication protein; protein involved in initiation of plasmid replication complement(139994..140980) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818214 YP_005220438.1 CDS Rahaq2_4706 NC_016835.1 142357 142566 R PFAM: ParG; ParG complement(142357..142566) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818215 YP_005220439.1 CDS Rahaq2_4707 NC_016835.1 142563 143189 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase complement(142563..143189) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818216 YP_005220440.1 CDS Rahaq2_4708 NC_016835.1 144564 145649 R PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; spermidine/putrescine ABC transporter ATP-binding subunit complement(144564..145649) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818217 YP_005220441.1 CDS Rahaq2_4709 NC_016835.1 145911 147455 R PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; transcriptional regulator with HTH domain and aminotransferase domain complement(145911..147455) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818218 YP_005220442.1 CDS Rahaq2_4710 NC_016835.1 147601 148869 D PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; 4-aminobutyrate aminotransferase 147601..148869 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818219 YP_005220443.1 CDS Rahaq2_4711 NC_016835.1 149143 150171 D PFAM: Bacterial extracellular solute-binding protein; spermidine/putrescine-binding periplasmic protein 149143..150171 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818220 YP_005220444.1 CDS Rahaq2_4712 NC_016835.1 150342 151607 D PFAM: Binding-protein-dependent transport system inner membrane component; spermidine/putrescine ABC transporter permease I 150342..151607 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818221 YP_005220445.1 CDS Rahaq2_4713 NC_016835.1 151619 152458 D PFAM: Binding-protein-dependent transport system inner membrane component; spermidine/putrescine ABC transporter permease II 151619..152458 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818222 YP_005220446.1 CDS Rahaq2_4714 NC_016835.1 152546 153289 D PFAM: short chain dehydrogenase; dehydrogenase 152546..153289 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818223 YP_005220447.1 CDS Rahaq2_4715 NC_016835.1 153282 154346 D PFAM: Phosphotransferase enzyme family; putative homoserine kinase type II (protein kinase fold) 153282..154346 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818224 YP_005220448.1 CDS Rahaq2_4716 NC_016835.1 154358 155614 D PFAM: Aminotransferase class-III; 4-aminobutyrate aminotransferase 154358..155614 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818225 YP_005220449.1 CDS Rahaq2_4717 NC_016835.1 155744 156490 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(155744..156490) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818226 YP_005220450.1 CDS Rahaq2_4718 NC_016835.1 156593 158050 R PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; MFS transporter, sugar porter family complement(156593..158050) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818227 YP_005220451.1 CDS Rahaq2_4719 NC_016835.1 158387 160762 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; anaerobic dimethyl sulfoxide reductase subunit A 158387..160762 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818228 YP_005220452.1 CDS Rahaq2_4720 NC_016835.1 160759 161379 D PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit; DMSO reductase, iron-sulfur subunit 160759..161379 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818229 YP_005220453.1 CDS Rahaq2_4721 NC_016835.1 161379 162227 D PFAM: DMSO reductase anchor subunit (DmsC); DMSO reductase anchor subunit 161379..162227 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818230 YP_005220454.1 CDS Rahaq2_4722 NC_016835.1 162227 163102 D hypothetical protein 162227..163102 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818231 YP_005220455.1 CDS Rahaq2_4723 NC_016835.1 163300 164496 D PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain; putative paraquat-inducible protein B 163300..164496 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818232 YP_005220456.1 CDS Rahaq2_4724 NC_016835.1 164641 164943 R PFAM: TM2 domain; hypothetical protein complement(164641..164943) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818233 YP_005220457.1 CDS Rahaq2_4725 NC_016835.1 165285 165545 R putative transcriptional regulator complement(165285..165545) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818234 YP_005220458.1 CDS Rahaq2_4727 NC_016835.1 166122 166427 R PFAM: Protein of unknown function (DUF1471); hypothetical protein complement(166122..166427) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818236 YP_005220459.1 CDS Rahaq2_4728 NC_016835.1 167067 168344 D PFAM: PTS system sugar-specific permease component; hypothetical protein 167067..168344 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818237 YP_005220460.1 CDS Rahaq2_4729 NC_016835.1 168474 169859 R PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase complement(168474..169859) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818238 YP_005220461.1 CDS Rahaq2_4730 NC_016835.1 169960 170844 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 169960..170844 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818239 YP_005220462.1 CDS Rahaq2_4731 NC_016835.1 171390 171797 D PFAM: H-NS histone family; DNA-binding protein H-NS 171390..171797 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818240 YP_005220463.1 CDS Rahaq2_4732 NC_016835.1 172003 172536 D PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 172003..172536 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818241 YP_005220464.1 CDS Rahaq2_4733 NC_016835.1 172697 173161 D hypothetical protein 172697..173161 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818242 YP_005220465.1 CDS Rahaq2_4734 NC_016835.1 173161 173490 D PFAM: Protein of unknown function (DUF1493); hypothetical protein 173161..173490 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818243 YP_005220466.1 CDS Rahaq2_4735 NC_016835.1 173512 173994 R PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(173512..173994) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818244 YP_005220467.1 CDS Rahaq2_4736 NC_016835.1 174174 175097 R PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase complement(174174..175097) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818245 YP_005220468.1 CDS Rahaq2_4737 NC_016835.1 175254 176027 D PFAM: Fic/DOC family; hypothetical protein 175254..176027 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818246 YP_005220469.1 CDS Rahaq2_4738 NC_016835.1 176080 177102 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(176080..177102) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818247 YP_005220470.1 CDS Rahaq2_4739 NC_016835.1 177099 178112 R PFAM: Branched-chain amino acid transport system / permease component; ribose/xylose/arabinose/galactoside ABC transporter permease complement(177099..178112) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818248 YP_005220471.1 CDS Rahaq2_4740 NC_016835.1 178109 179623 R PFAM: ABC transporter; sugar ABC transporter ATPase complement(178109..179623) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818249 YP_005220472.1 CDS Rahaq2_4741 NC_016835.1 179691 180683 R PFAM: family; TIGRFAM: rhamnose ABC transporter, rhamnose-binding protein; rhamnose ABC transporter, rhamnose-binding protein complement(179691..180683) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818250 YP_005220473.1 CDS Rahaq2_4742 NC_016835.1 181085 181900 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; DNA-binding domain-containing protein 181085..181900 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818251 YP_005220474.1 CDS Rahaq2_4743 NC_016835.1 182134 183573 D PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase 182134..183573 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818252 YP_005220475.1 CDS Rahaq2_4744 NC_016835.1 183645 184226 D PFAM: Uncharacterised ACR, YkgG family COG1556; hypothetical protein 183645..184226 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818253 YP_005220476.1 CDS Rahaq2_4745 NC_016835.1 184367 185437 D hypothetical protein 184367..185437 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818254 YP_005220477.1 CDS Rahaq2_4746 NC_016835.1 185456 186214 R hypothetical protein complement(185456..186214) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818255 YP_005220478.1 CDS Rahaq2_4747 NC_016835.1 187004 189157 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; outer membrane receptor for Fe3+-dicitrate 187004..189157 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818256 YP_005220479.1 CDS Rahaq2_4748 NC_016835.1 189324 191723 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; membrane-bound PQQ-dependent dehydrogenase 189324..191723 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818257 YP_005220480.1 CDS Rahaq2_4749 NC_016835.1 191805 192155 R PFAM: Variant SH3 domain; SH3 domain-containing protein complement(191805..192155) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818258 YP_005220481.1 CDS Rahaq2_4750 NC_016835.1 192197 192655 R hypothetical protein complement(192197..192655) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818259 YP_005220482.1 CDS Rahaq2_4751 NC_016835.1 192870 193232 D PFAM: Protein of unknown function, DUF596; hypothetical protein 192870..193232 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818260 YP_005220483.1 CDS Rahaq2_4752 NC_016835.1 193239 193883 R hypothetical protein complement(193239..193883) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818261 YP_005220484.1 CDS Rahaq2_4753 NC_016835.1 194021 194401 D hypothetical protein 194021..194401 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818262 YP_005220485.1 CDS Rahaq2_4754 NC_016835.1 194408 194647 R PFAM: Protein of unknown function (DUF1272); hypothetical protein complement(194408..194647) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818263 YP_005220486.1 CDS Rahaq2_4755 NC_016835.1 194679 196097 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; arabinose efflux permease family protein complement(194679..196097) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818264 YP_005220487.1 CDS Rahaq2_4756 NC_016835.1 196232 197137 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 196232..197137 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818265 YP_005220488.1 CDS Rahaq2_4757 NC_016835.1 197141 197803 R PFAM: Exonuclease; DNA polymerase III epsilon subunit-like 3'-5' exonuclease complement(197141..197803) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818266 YP_005220489.1 CDS Rahaq2_4758 NC_016835.1 198191 199345 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; L-alanine-DL-glutamate epimerase-like protein 198191..199345 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818267 YP_005220490.1 CDS Rahaq2_4759 NC_016835.1 199397 201040 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 199397..201040 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818268 YP_005220491.1 CDS Rahaq2_4760 NC_016835.1 201037 202098 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 201037..202098 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818269 YP_005220492.1 CDS Rahaq2_4761 NC_016835.1 202095 203000 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 202095..203000 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818270 YP_005220493.1 CDS Rahaq2_4762 NC_016835.1 202972 203838 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; dipeptide/oligopeptide/nickel ABC transporter ATPase 202972..203838 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818271 YP_005220494.1 CDS Rahaq2_4763 NC_016835.1 203848 204633 D PFAM: ABC transporter; dipeptide/oligopeptide/nickel ABC transporter ATPase 203848..204633 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818272 YP_005220495.1 CDS Rahaq2_4764 NC_016835.1 205077 205328 D hypothetical protein 205077..205328 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818273 YP_005220496.1 CDS Rahaq2_4765 NC_016835.1 205343 205450 R hypothetical protein complement(205343..205450) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818274 YP_005220497.1 CDS Rahaq2_4766 NC_016835.1 205434 206525 R PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family; type VI secretion protein complement(205434..206525) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818275 YP_005220498.1 CDS Rahaq2_4767 NC_016835.1 206489 208264 R PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family; type VI secretion protein complement(206489..208264) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818276 YP_005220499.1 CDS Rahaq2_4768 NC_016835.1 208264 208797 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; type VI secretion lipoprotein complement(208264..208797) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818277 YP_005220500.1 CDS Rahaq2_4769 NC_016835.1 208784 212152 R PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; hypothetical protein complement(208784..212152) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818278 YP_005220501.1 CDS Rahaq2_4770 NC_016835.1 212145 213557 R hypothetical protein complement(212145..213557) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818279 YP_005220502.1 CDS Rahaq2_4771 NC_016835.1 213557 213811 R hypothetical protein complement(213557..213811) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818280 YP_005220503.1 CDS Rahaq2_4772 NC_016835.1 213880 214626 R hypothetical protein complement(213880..214626) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818281 YP_005220504.1 CDS Rahaq2_4773 NC_016835.1 214623 215369 R hypothetical protein complement(214623..215369) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818282 YP_005220505.1 CDS Rahaq2_4774 NC_016835.1 215382 217499 R PFAM: Protein of unknown function (DUF3274); hypothetical protein complement(215382..217499) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818283 YP_005220506.1 CDS Rahaq2_4775 NC_016835.1 217499 220009 R PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; Rhs element Vgr protein complement(217499..220009) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818284 YP_005220507.1 CDS Rahaq2_4777 NC_016835.1 220500 222299 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(220500..222299) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818286 YP_005220508.1 CDS Rahaq2_4778 NC_016835.1 222299 223807 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein complement(222299..223807) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818287 YP_005220509.1 CDS Rahaq2_4779 NC_016835.1 223821 225059 R PFAM: Major Facilitator Superfamily; major facilitator superfamily transporter complement(223821..225059) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818288 YP_005220510.1 CDS Rahaq2_4780 NC_016835.1 225064 225879 R PFAM: ABC transporter; ATPase component of various ABC-type transport systems with duplicated ATPase domain complement(225064..225879) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818289 YP_005220511.1 CDS Rahaq2_4781 NC_016835.1 225879 226697 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain complement(225879..226697) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818290 YP_005220512.1 CDS Rahaq2_4782 NC_016835.1 226955 228010 R PFAM: Bacterial regulatory proteins, lacI family; TIGRFAM: D-fructose-responsive transcription factor; D-fructose-responsive transcription factor complement(226955..228010) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818291 YP_005220513.1 CDS Rahaq2_4783 NC_016835.1 228011 229420 R PFAM: Glycosyl hydrolases family 32 N-terminal domain; TIGRFAM: sucrose-6-phosphate hydrolase; sucrose-6-phosphate hydrolase complement(228011..229420) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818292 YP_005220514.1 CDS Rahaq2_4784 NC_016835.1 229417 230790 R PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, sucrose-specific IIBC component; PTS system, glucose-like IIB component; PTS system, maltose and glucose-specific subfamily, IIC component; PTS system, maltose and glucose-specific subfamily, IIC component complement(229417..230790) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818293 YP_005220515.1 CDS Rahaq2_4785 NC_016835.1 230866 232446 R PFAM: LamB porin; maltoporin (phage lambda and maltose receptor) complement(230866..232446) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818294 YP_005220516.1 CDS Rahaq2_4786 NC_016835.1 232697 233629 D PFAM: pfkB family carbohydrate kinase; sugar kinase 232697..233629 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818295 YP_005220517.1 CDS Rahaq2_4787 NC_016835.1 233851 236274 D PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein 233851..236274 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818296 YP_005220518.1 CDS Rahaq2_4788 NC_016835.1 236486 236872 R PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; hypothetical protein complement(236486..236872) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818297 YP_005220519.1 CDS Rahaq2_4790 NC_016835.1 237187 238221 R PFAM: Bacterial extracellular solute-binding protein, family 7; TRAP-type C4-dicarboxylate transport system, periplasmic component complement(237187..238221) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818299 YP_005220520.1 CDS Rahaq2_4791 NC_016835.1 238370 240790 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; outer membrane receptor for ferrienterochelin and colicins complement(238370..240790) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818300 YP_005220521.1 CDS Rahaq2_4792 NC_016835.1 241157 241969 D PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain; siderophore-interacting protein 241157..241969 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818301 YP_005220522.1 CDS Rahaq2_4793 NC_016835.1 241978 242457 D PFAM: Transcriptional regulator PadR-like family; manually curated; putative transcriptional regulator 241978..242457 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818302 YP_005220523.1 CDS Rahaq2_4794 NC_016835.1 242642 245575 D TIGRFAM: RHS repeat-associated core domain; RHS repeat-associated core domain-containing protein 242642..245575 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818303 YP_005220524.1 CDS Rahaq2_4795 NC_016835.1 245673 246473 R PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase complement(245673..246473) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818304 YP_005220525.1 CDS Rahaq2_4796 NC_016835.1 246466 246720 R PFAM: Protein of unknown function (DUF3423); hypothetical protein complement(246466..246720) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818305 YP_005220526.1 CDS Rahaq2_4797 NC_016835.1 246880 247269 D hypothetical protein 246880..247269 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818306 YP_005220527.1 CDS Rahaq2_4798 NC_016835.1 247382 247633 R TIGRFAM: pentapeptide MXKDX repeat protein; pentapeptide MXKDX repeat-containing protein complement(247382..247633) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818307 YP_005220528.1 CDS Rahaq2_4799 NC_016835.1 247684 248487 R PFAM: Oxidoreductase molybdopterin binding domain; sulfite oxidase-like oxidoreductase complement(247684..248487) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818308 YP_005220529.1 CDS Rahaq2_4800 NC_016835.1 248497 249123 R PFAM: Cytochrome b(N-terminal)/b6/petB; thiosulfate reductase cytochrome B subunit (membrane anchoring protein) complement(248497..249123) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818309 YP_005220530.1 CDS Rahaq2_4801 NC_016835.1 249277 249999 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 249277..249999 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818310 YP_005220531.1 CDS Rahaq2_4802 NC_016835.1 250003 251469 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 250003..251469 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818311 YP_005220532.1 CDS Rahaq2_4803 NC_016835.1 251598 251918 D PFAM: Small Multidrug Resistance protein; cation/cationic drug transporter 251598..251918 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818312 YP_005220533.1 CDS Rahaq2_4804 NC_016835.1 251978 252451 R PFAM: Helix-turn-helix; Helix-turn-helix protein complement(251978..252451) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818313 YP_005220534.1 CDS Rahaq2_4807 NC_016835.1 253354 253572 D PFAM: Bacterial protein of unknown function (DUF903); hypothetical protein 253354..253572 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818316 YP_005220535.1 CDS Rahaq2_4808 NC_016835.1 253800 254318 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; DNA-directed RNA polymerase subunit sigma24 253800..254318 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818317 YP_005220536.1 CDS Rahaq2_4809 NC_016835.1 254324 255295 D PFAM: FecR protein; Fe2+-dicitrate sensor membrane protein 254324..255295 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818318 YP_005220537.1 CDS Rahaq2_4810 NC_016835.1 255431 257791 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 255431..257791 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818319 YP_005220538.1 CDS Rahaq2_4811 NC_016835.1 257843 258748 D PFAM: Periplasmic binding protein; ABC-type Fe3+-citrate transport system, periplasmic component 257843..258748 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818320 YP_005220539.1 CDS Rahaq2_4812 NC_016835.1 258745 259749 D PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 258745..259749 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818321 YP_005220540.1 CDS Rahaq2_4813 NC_016835.1 259746 260708 D PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 259746..260708 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818322 YP_005220541.1 CDS Rahaq2_4814 NC_016835.1 260711 261478 D PFAM: ABC transporter; cobalamin/Fe3+-siderophore ABC transporter ATPase 260711..261478 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818323 YP_005220542.1 CDS Rahaq2_4815 NC_016835.1 261503 261988 R PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(261503..261988) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818324 YP_005220543.1 CDS Rahaq2_4816 NC_016835.1 262179 262706 D PFAM: Protein of unknown function (DUF2778); hypothetical protein 262179..262706 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818325 YP_005220544.1 CDS Rahaq2_4817 NC_016835.1 262675 262941 D hypothetical protein 262675..262941 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818326 YP_005220545.1 CDS Rahaq2_4818 NC_016835.1 263144 264307 D PFAM: FMN-dependent dehydrogenase; alpha-hydroxyacid dehydrogenase 263144..264307 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818327 YP_005220546.1 CDS Rahaq2_4819 NC_016835.1 264350 265480 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(264350..265480) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818328 YP_005220547.1 CDS Rahaq2_4820 NC_016835.1 265489 267699 R PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); TIGRFAM: coenzyme PQQ biosynthesis probable peptidase PqqF; coenzyme PQQ biosynthesis peptidase PqqF complement(265489..267699) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818329 YP_005220548.1 CDS Rahaq2_4821 NC_016835.1 267707 268840 R PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein E; radical SAM additional 4Fe4S-binding domain; coenzyme PQQ biosynthesis protein E complement(267707..268840) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818330 YP_005220549.1 CDS Rahaq2_4822 NC_016835.1 268827 269114 R PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; coenzyme PQQ biosynthesis protein PqqD complement(268827..269114) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818331 YP_005220550.1 CDS Rahaq2_4823 NC_016835.1 269111 269878 R PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C; coenzyme PQQ biosynthesis protein C complement(269111..269878) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818332 YP_005220551.1 CDS Rahaq2_4824 NC_016835.1 269891 270802 R TIGRFAM: coenzyme PQQ biosynthesis protein B; coenzyme PQQ biosynthesis protein B complement(269891..270802) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818333 YP_005220552.1 CDS Rahaq2_4825 NC_016835.1 270860 270931 R PFAM: PqqA family; TIGRFAM: coenzyme PQQ biosynthesis protein A; manually curated; coenzyme PQQ biosynthesis protein A complement(270860..270931) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818334 YP_005220553.1 CDS Rahaq2_4826 NC_016835.1 271102 272139 R PFAM: Membrane dipeptidase (Peptidase family M19); Zn-dependent dipeptidase, microsomal dipeptidase complement(271102..272139) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818335 YP_005220554.1 CDS Rahaq2_4827 NC_016835.1 272863 275088 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(272863..275088) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818336 YP_005220555.1 CDS Rahaq2_4828 NC_016835.1 275983 276885 D PFAM: Homocysteine S-methyltransferase; homocysteine/selenocysteine methylase 275983..276885 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818337 YP_005220556.1 CDS Rahaq2_4829 NC_016835.1 276969 278513 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter substrate-binding protein 276969..278513 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818338 YP_005220557.1 CDS Rahaq2_4830 NC_016835.1 278473 279546 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 278473..279546 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818339 YP_005220558.1 CDS Rahaq2_4831 NC_016835.1 279565 280383 D PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 279565..280383 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818340 YP_005220559.1 CDS Rahaq2_4832 NC_016835.1 280376 281962 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ATPase component of various ABC-type transport systems with duplicated ATPase domain 280376..281962 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818341 YP_005220560.1 CDS Rahaq2_4833 NC_016835.1 282205 283869 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 282205..283869 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818342 YP_005220561.1 CDS Rahaq2_4834 NC_016835.1 283994 284881 D PFAM: Beta-lactamase; beta-lactamase class A 283994..284881 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818343 YP_005220562.1 CDS Rahaq2_4835 NC_016835.1 285035 285385 D hypothetical protein 285035..285385 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818344 YP_005220563.1 CDS Rahaq2_4836 NC_016835.1 286156 287538 D PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; 2,4-diaminobutyrate 4-transaminase 286156..287538 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818345 YP_005220564.1 CDS Rahaq2_4837 NC_016835.1 287557 289029 D PFAM: Pyridoxal-dependent decarboxylase conserved domain; PLP-dependent enzyme, glutamate decarboxylase 287557..289029 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818346 YP_005220565.1 CDS Rahaq2_4838 NC_016835.1 289379 290491 D PFAM: Mechanosensitive ion channel; small-conductance mechanosensitive channel 289379..290491 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818347 YP_005220566.1 CDS Rahaq2_4839 NC_016835.1 290602 291048 R PFAM: Protein of unknown function (DUF421); hypothetical protein complement(290602..291048) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818348 YP_005220567.1 CDS Rahaq2_4840 NC_016835.1 291061 291579 R hypothetical protein complement(291061..291579) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818349 YP_005220568.1 CDS Rahaq2_4841 NC_016835.1 291745 292938 D PFAM: Alcohol dehydrogenase GroES-like domain; theronine dehydrogenase-like Zn-dependent dehydrogenase 291745..292938 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818350 YP_005220569.1 CDS Rahaq2_4842 NC_016835.1 292972 295482 R PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase; malto-oligosyltrehalose synthase complement(292972..295482) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818351 YP_005220570.1 CDS Rahaq2_4843 NC_016835.1 295479 297266 R PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase; malto-oligosyltrehalose trehalohydrolase complement(295479..297266) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818352 YP_005220571.1 CDS Rahaq2_4844 NC_016835.1 297412 297603 R hypothetical protein complement(297412..297603) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818353 YP_005220572.1 CDS Rahaq2_4845 NC_016835.1 297910 299016 D PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein 297910..299016 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818354 YP_005220573.1 CDS Rahaq2_4846 NC_016835.1 299414 301102 D PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; putative regulator of cell autolysis 299414..301102 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818355 YP_005220574.1 CDS Rahaq2_4847 NC_016835.1 301096 301815 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family 301096..301815 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818356 YP_005220575.1 CDS Rahaq2_4848 NC_016835.1 301837 302826 R PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain; putative GTPase, G3E family complement(301837..302826) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818357 YP_005220576.1 CDS Rahaq2_4849 NC_016835.1 302856 303059 R PFAM: Protein of unknown function (DUF466); hypothetical protein complement(302856..303059) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818358 YP_005220577.1 CDS Rahaq2_4850 NC_016835.1 303119 305302 R PFAM: Carbon starvation protein CstA; carbon starvation membrane protein complement(303119..305302) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818359 YP_005220578.1 CDS Rahaq2_4852 NC_016835.1 305805 306284 R PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(305805..306284) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818361 YP_005220579.1 CDS Rahaq2_4853 NC_016835.1 306522 307172 R hypothetical protein complement(306522..307172) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818362 YP_005220580.1 CDS Rahaq2_4854 NC_016835.1 307586 308017 D PFAM: Peptidase S24-like; SOS response transcriptional repressor, RecA-mediated autopeptidase 307586..308017 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818363 YP_005220581.1 CDS Rahaq2_4855 NC_016835.1 308020 309285 D PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; nucleotidyltransferase/DNA polymerase involved in DNA repair 308020..309285 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818364 YP_005220582.1 CDS Rahaq2_4856 NC_016835.1 309609 311267 D PFAM: Mechanosensitive ion channel; small-conductance mechanosensitive channel 309609..311267 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818365 YP_005220583.1 CDS Rahaq2_4857 NC_016835.1 311310 311753 R PFAM: SnoaL-like polyketide cyclase; putative ester cyclase complement(311310..311753) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818366 YP_005220584.1 CDS Rahaq2_4858 NC_016835.1 311872 312786 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 311872..312786 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818367 YP_005220585.1 CDS Rahaq2_4859 NC_016835.1 312875 313735 R PFAM: Aldo/keto reductase family; putative oxidoreductase, aryl-alcohol dehydrogenase like protein complement(312875..313735) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818368 YP_005220586.1 CDS Rahaq2_4860 NC_016835.1 313831 314766 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 313831..314766 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818369 YP_005220587.1 CDS Rahaq2_4862 NC_016835.1 315069 315644 R PFAM: Domain of unknown function DUF; hypothetical protein complement(315069..315644) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818371 YP_005220588.1 CDS Rahaq2_4863 NC_016835.1 316147 316626 D PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family; manually curated; type VI secretion protein 316147..316626 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818372 YP_005220589.1 CDS Rahaq2_4864 NC_016835.1 316623 318104 D PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; type VI secretion protein EvpB 316623..318104 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818373 YP_005220590.1 CDS Rahaq2_4865 NC_016835.1 318129 318623 D PFAM: Protein of unknown function (DUF796); hemolysin-coregulated protein 318129..318623 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818374 YP_005220591.1 CDS Rahaq2_4866 NC_016835.1 318677 319093 D PFAM: Gene 25-like lysozyme; hypothetical protein 318677..319093 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818375 YP_005220592.1 CDS Rahaq2_4867 NC_016835.1 319106 320908 D PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family; type VI secretion protein 319106..320908 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818376 YP_005220593.1 CDS Rahaq2_4868 NC_016835.1 320899 321846 D PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family; type VI secretion protein 320899..321846 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818377 YP_005220594.1 CDS Rahaq2_4869 NC_016835.1 321850 323763 D PFAM: Phage-related baseplate assembly protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; Rhs element Vgr protein 321850..323763 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818378 YP_005220595.1 CDS Rahaq2_4870 NC_016835.1 323777 324292 D hypothetical protein 323777..324292 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818379 YP_005220596.1 CDS Rahaq2_4871 NC_016835.1 324292 324591 D PFAM: PAAR motif; hypothetical protein 324292..324591 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818380 YP_005220597.1 CDS Rahaq2_4872 NC_016835.1 324603 325667 D PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, ImpA family; type VI secretion-associated protein, ImpA family 324603..325667 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818381 YP_005220598.1 CDS Rahaq2_4873 NC_016835.1 325694 326239 D hypothetical protein 325694..326239 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818382 YP_005220599.1 CDS Rahaq2_4874 NC_016835.1 326239 327633 D PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family; type VI secretion protein 326239..327633 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818383 YP_005220600.1 CDS Rahaq2_4875 NC_016835.1 327630 328253 D PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family; hypothetical protein 327630..328253 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818384 YP_005220601.1 CDS Rahaq2_4876 NC_016835.1 328257 331694 D hypothetical protein 328257..331694 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818385 YP_005220602.1 CDS Rahaq2_4877 NC_016835.1 331740 334310 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family; type VI secretion ATPase, ClpV1 family 331740..334310 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818386 YP_005220603.1 CDS Rahaq2_4878 NC_016835.1 334331 335668 D PFAM: ImpA-related N-terminal; ImpA domain protein; hypothetical protein 334331..335668 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818387 YP_005220604.1 CDS Rahaq2_4879 NC_016835.1 335739 336494 D hypothetical protein 335739..336494 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818388 YP_005220605.1 CDS Rahaq2_4880 NC_016835.1 336657 338531 D PFAM: K+ potassium transporter; TIGRFAM: potassium uptake protein; potassium uptake protein 336657..338531 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818389 YP_005220606.1 CDS Rahaq2_4881 NC_016835.1 338577 339374 R hypothetical protein complement(338577..339374) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818390 YP_005220607.1 CDS Rahaq2_4882 NC_016835.1 339446 339676 D hypothetical protein 339446..339676 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818391 YP_005220608.1 CDS Rahaq2_4883 NC_016835.1 339763 340650 D PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C 339763..340650 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818392 YP_005220609.1 CDS Rahaq2_4884 NC_016835.1 340835 341833 D PFAM: ROK family; transcriptional regulator/sugar kinase 340835..341833 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818393 YP_005220610.1 CDS Rahaq2_4885 NC_016835.1 341922 343094 D PFAM: Major Facilitator Superfamily; major facilitator superfamily transporter 341922..343094 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818394 YP_005220611.1 CDS Rahaq2_4886 NC_016835.1 343124 343951 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 343124..343951 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818395 YP_005220612.1 CDS Rahaq2_4887 NC_016835.1 344016 344555 R hypothetical protein complement(344016..344555) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818396 YP_005220613.1 CDS Rahaq2_4888 NC_016835.1 344570 344920 R hypothetical protein complement(344570..344920) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818397 YP_005220614.1 CDS Rahaq2_4889 NC_016835.1 345179 345622 R PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; Mn-dependent transcriptional regulator complement(345179..345622) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818398 YP_005220615.1 CDS Rahaq2_4890 NC_016835.1 345810 346751 D PFAM: Periplasmic solute binding protein family; metal ion ABC transporter substrate-binding protein 345810..346751 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818399 YP_005220616.1 CDS Rahaq2_4891 NC_016835.1 346748 347527 D PFAM: ABC transporter; Mn/Zn ABC transporter ATPase 346748..347527 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818400 YP_005220617.1 CDS Rahaq2_4892 NC_016835.1 347524 348378 D PFAM: ABC 3 transport family; Mn2+/Zn2+ ABC transporter permease 347524..348378 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818401 YP_005220618.1 CDS Rahaq2_4893 NC_016835.1 348375 349229 D PFAM: ABC 3 transport family; Mn2+/Zn2+ ABC transporter permease 348375..349229 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818402 YP_005220619.1 CDS Rahaq2_4894 NC_016835.1 349369 349548 D hypothetical protein 349369..349548 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818403 YP_005220620.1 CDS Rahaq2_4895 NC_016835.1 349728 350972 R PFAM: Tryptophan/tyrosine permease family; TIGRFAM: aromatic amino acid transport protein; aromatic amino acid transport protein complement(349728..350972) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818404 YP_005220621.1 CDS Rahaq2_4896 NC_016835.1 351208 351396 R hypothetical protein complement(351208..351396) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818405 YP_005220622.1 CDS Rahaq2_4897 NC_016835.1 351934 352668 R PFAM: Pirin; Pirin-like protein complement(351934..352668) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818406 YP_005220623.1 CDS Rahaq2_4898 NC_016835.1 352739 354472 R PFAM: ABC transporter; ABC transporter ATPase complement(352739..354472) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818407 YP_005220624.1 CDS Rahaq2_4899 NC_016835.1 354761 355999 R PFAM: Bacterial protein of unknown function (DUF894); arabinose efflux permease family protein complement(354761..355999) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818408 YP_005220625.1 CDS Rahaq2_4900 NC_016835.1 356137 357060 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(356137..357060) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818409 YP_005220626.1 CDS Rahaq2_4901 NC_016835.1 357135 357737 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(357135..357737) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818410 YP_005220627.1 CDS Rahaq2_4902 NC_016835.1 357825 358502 R PFAM: short chain dehydrogenase; dehydrogenase complement(357825..358502) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818411 YP_005220628.1 CDS Rahaq2_4903 NC_016835.1 358838 359611 D PFAM: Protein of unknown function (DUF3750); hypothetical protein 358838..359611 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818412 YP_005220629.1 CDS Rahaq2_4904 NC_016835.1 359775 361421 R PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily complement(359775..361421) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818413 YP_005220630.1 CDS Rahaq2_4905 NC_016835.1 361612 363045 R PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; anion transporter complement(361612..363045) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818414 YP_005220631.1 CDS Rahaq2_4906 NC_016835.1 363862 366639 D PFAM: FAD binding domain; NADH:flavin oxidoreductase / NADH oxidase family; FMN-binding domain; TIGRFAM: flavocytochrome c; flavocytochrome c 363862..366639 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818415 YP_005220632.1 CDS Rahaq2_4907 NC_016835.1 366664 367626 D PFAM: ApbE family; membrane-associated lipoprotein involved in thiamine biosynthesis 366664..367626 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818416 YP_005220633.1 CDS Rahaq2_4908 NC_016835.1 367637 368356 R PFAM: Response regulator receiver domain; response regulator of citrate/malate metabolism complement(367637..368356) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818417 YP_005220634.1 CDS Rahaq2_4909 NC_016835.1 368353 369972 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; signal transduction histidine kinase regulating citrate/malate metabolism complement(368353..369972) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818418 YP_005220635.1 CDS Rahaq2_4910 NC_016835.1 370213 370530 R PFAM: Domain of unknown function (DUF3315); hypothetical protein complement(370213..370530) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818419 YP_005220636.1 CDS Rahaq2_4911 NC_016835.1 370897 373305 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; membrane-bound PQQ-dependent dehydrogenase 370897..373305 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818420 YP_005220637.1 CDS Rahaq2_4912 NC_016835.1 373411 374316 D PFAM: short chain dehydrogenase; dehydrogenase 373411..374316 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818421 YP_005220638.1 CDS Rahaq2_4913 NC_016835.1 374531 374956 D PFAM: Predicted membrane protein (DUF2231); hypothetical protein 374531..374956 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818422 YP_005220639.1 CDS Rahaq2_4914 NC_016835.1 374969 376273 D PFAM: Glucose / Sorbosone dehydrogenase; Membrane bound L-sorbosone dehydrogenase; glucose/sorbosone dehydrogenase 374969..376273 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818423 YP_005220640.1 CDS Rahaq2_4915 NC_016835.1 376541 376762 D hypothetical protein 376541..376762 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818424 YP_005220641.1 CDS Rahaq2_4916 NC_016835.1 376834 377745 R PFAM: Helix-turn-helix domain, rpiR family; SIS domain; transcriptional regulator complement(376834..377745) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818425 YP_005220642.1 CDS Rahaq2_4917 NC_016835.1 378030 380216 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 378030..380216 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818426 YP_005220643.1 CDS Rahaq2_4918 NC_016835.1 380206 381360 D PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein 380206..381360 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818427 YP_005220644.1 CDS Rahaq2_4919 NC_016835.1 381625 383178 D PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; amino acid/peptide transporter (peptide:H symporter) 381625..383178 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818428 YP_005220645.1 CDS Rahaq2_4920 NC_016835.1 383248 383679 R PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); glutaredoxin-dependent arsenate reductase complement(383248..383679) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818429 YP_005220646.1 CDS Rahaq2_4921 NC_016835.1 383731 385020 R PFAM: Arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; arsenical pump membrane protein complement(383731..385020) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818430 YP_005220647.1 CDS Rahaq2_4922 NC_016835.1 385065 385385 R PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator complement(385065..385385) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818431 YP_005220648.1 CDS Rahaq2_4923 NC_016835.1 385538 385711 R hypothetical protein complement(385538..385711) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818432 YP_005220649.1 CDS Rahaq2_4924 NC_016835.1 385767 387041 D PFAM: Uncharacterised BCR, COG1649; hypothetical protein 385767..387041 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818433 YP_005220650.1 CDS Rahaq2_4925 NC_016835.1 387109 387696 R hypothetical protein complement(387109..387696) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818434 YP_005220651.1 CDS Rahaq2_4926 NC_016835.1 387950 388285 D hypothetical protein 387950..388285 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818435 YP_005220652.1 CDS Rahaq2_4927 NC_016835.1 388531 389163 D cAMP-binding protein 388531..389163 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818436 YP_005220653.1 CDS Rahaq2_4928 NC_016835.1 389220 389606 R PFAM: YebG protein; hypothetical protein complement(389220..389606) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818437 YP_005220654.1 CDS Rahaq2_4930 NC_016835.1 389930 390619 D PFAM: B3/4 domain; hypothetical protein 389930..390619 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818439 YP_005220655.1 CDS Rahaq2_4931 NC_016835.1 390632 391030 R TIGRFAM: conserved hypothetical protein; hypothetical protein complement(390632..391030) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818440 YP_005220656.1 CDS Rahaq2_4932 NC_016835.1 391034 391759 R PFAM: Sulfite exporter TauE/SafE; putative permease complement(391034..391759) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818441 YP_005220657.1 CDS Rahaq2_4933 NC_016835.1 391867 392757 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 391867..392757 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818442 YP_005220658.1 CDS Rahaq2_4934 NC_016835.1 392748 394418 R PFAM: Trehalase; neutral trehalase complement(392748..394418) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818443 YP_005220659.1 CDS Rahaq2_4935 NC_016835.1 394447 395853 R PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; UDP-forming alpha,alpha-trehalose-phosphate synthase complement(394447..395853) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818444 YP_005220660.1 CDS Rahaq2_4936 NC_016835.1 395850 396644 R PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase complement(395850..396644) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818445 YP_005220661.1 CDS Rahaq2_4937 NC_016835.1 396857 397537 R PFAM: Oligogalacturonate-specific porin protein (KdgM); Oligogalacturonate-specific porin protein (KdgM) complement(396857..397537) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818446 YP_005220662.1 CDS Rahaq2_4938 NC_016835.1 397606 399774 R hypothetical protein complement(397606..399774) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818447 YP_005220663.1 CDS Rahaq2_4939 NC_016835.1 399861 401426 R PFAM: Major Facilitator Superfamily; Na+/melibiose symporter-like transporter complement(399861..401426) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818448 YP_005220664.1 CDS Rahaq2_4940 NC_016835.1 401815 402795 R PFAM: Protein of unknown function (DUF535); hypothetical protein complement(401815..402795) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818449 YP_005220665.1 CDS Rahaq2_4941 NC_016835.1 403091 403828 D PFAM: PAP2 superfamily; membrane-associated phospholipid phosphatase 403091..403828 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818450 YP_005220666.1 CDS Rahaq2_4942 NC_016835.1 403997 404488 D PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; type VI secretion system effector 403997..404488 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818451 YP_005220667.1 CDS Rahaq2_4943 NC_016835.1 404501 405025 D PFAM: Protein of unknown function (DUF2778); hypothetical protein 404501..405025 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818452 YP_005220668.1 CDS Rahaq2_4944 NC_016835.1 405003 405305 D hypothetical protein 405003..405305 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818453 YP_005220669.1 CDS Rahaq2_4945 NC_016835.1 405482 406564 R PFAM: Iron-containing alcohol dehydrogenase; glycerol dehydrogenase complement(405482..406564) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818454 YP_005220670.1 CDS Rahaq2_4946 NC_016835.1 406786 407853 D PFAM: family; sugar ABC transporter periplasmic protein 406786..407853 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818455 YP_005220671.1 CDS Rahaq2_4947 NC_016835.1 407869 409110 D PFAM: LVIVD repeat; hypothetical protein 407869..409110 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818456 YP_005220672.1 CDS Rahaq2_4948 NC_016835.1 409131 410054 R PFAM: EamA-like transporter family; DMT(drug/metabolite transporter) superfamily permease complement(409131..410054) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818457 YP_005220673.1 CDS Rahaq2_4949 NC_016835.1 410194 410916 D PFAM: 2-phosphosulpholactate phosphatase; phosphosulfolactate phosphohydrolase-like enzyme 410194..410916 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818458 YP_005220674.1 CDS Rahaq2_4950 NC_016835.1 411047 412492 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; arabinose efflux permease family protein 411047..412492 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818459 YP_005220675.1 CDS Rahaq2_4951 NC_016835.1 412543 413433 D PFAM: Dihydrodipicolinate synthetase family; dihydrodipicolinate synthase/N-acetylneuraminate lyase 412543..413433 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818460 YP_005220676.1 CDS Rahaq2_4952 NC_016835.1 413675 414082 D hypothetical protein 413675..414082 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818461 YP_005220677.1 CDS Rahaq2_4953 NC_016835.1 414207 415343 R PFAM: CblD like pilus biogenesis initiator; CblD like pilus biogenesis initiator complement(414207..415343) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818462 YP_005220678.1 CDS Rahaq2_4954 NC_016835.1 415343 418030 R hypothetical protein complement(415343..418030) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818463 YP_005220679.1 CDS Rahaq2_4955 NC_016835.1 418216 418746 R PFAM: CS1 type fimbrial major subunit; CS1 type fimbrial major subunit complement(418216..418746) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818464 YP_005220680.1 CDS Rahaq2_4956 NC_016835.1 418827 419549 R PFAM: Gram-negative pili assembly chaperone, N-terminal domain; P pilus assembly protein, chaperone PapD complement(418827..419549) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818465 YP_005220681.1 CDS Rahaq2_4957 NC_016835.1 420074 421426 D hypothetical protein 420074..421426 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818466 YP_005220682.1 CDS Rahaq2_4958 NC_016835.1 421431 424403 D PFAM: Virulence factor SrfB; hypothetical protein 421431..424403 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818467 YP_005220683.1 CDS Rahaq2_4959 NC_016835.1 424400 426775 D PFAM: Putative bacterial virulence factor; hypothetical protein 424400..426775 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818468 YP_005220684.1 CDS Rahaq2_4960 NC_016835.1 426963 428012 D PFAM: DeoC/LacD family aldolase; DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme 426963..428012 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818469 YP_005220685.1 CDS Rahaq2_4962 NC_016835.1 428335 430020 D PFAM: Hsp70 protein; molecular chaperone 428335..430020 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818471 YP_005220686.1 CDS Rahaq2_4963 NC_016835.1 430025 430597 D hypothetical protein 430025..430597 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818472 YP_005220687.1 CDS Rahaq2_4964 NC_016835.1 430638 431969 D hypothetical protein 430638..431969 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818473 YP_005220688.1 CDS Rahaq2_4965 NC_016835.1 432002 433483 R PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939); glycosidase complement(432002..433483) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818474 YP_005220689.1 CDS Rahaq2_4966 NC_016835.1 433607 435109 R PFAM: Sugar (and other) transporter; Osmosensory transporter coiled coil; TIGRFAM: metabolite-proton symporter; metabolite-proton symporter complement(433607..435109) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818475 YP_005220690.1 CDS Rahaq2_4967 NC_016835.1 435402 436583 D hypothetical protein 435402..436583 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818476 YP_005220691.1 CDS Rahaq2_4968 NC_016835.1 436587 436907 D PFAM: Cupin domain; cupin domain-containing protein 436587..436907 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818477 YP_005220692.1 CDS Rahaq2_4969 NC_016835.1 436977 437615 R PFAM: Ribose-5-phosphate isomerase; Ribose/Galactose Isomerase; ribose 5-phosphate isomerase RpiB complement(436977..437615) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818478 YP_005220693.1 CDS Rahaq2_4970 NC_016835.1 437684 438445 R PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; 2-deoxy-D-gluconate 3-dehydrogenase complement(437684..438445) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818479 YP_005220694.1 CDS Rahaq2_4971 NC_016835.1 438839 439195 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(438839..439195) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818480 YP_005220695.1 CDS Rahaq2_4972 NC_016835.1 439553 440776 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter, MFP subunit 439553..440776 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818481 YP_005220696.1 CDS Rahaq2_4973 NC_016835.1 440793 443945 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 440793..443945 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818482 YP_005220697.1 CDS Rahaq2_4974 NC_016835.1 444035 444520 R PFAM: Transcriptional regulator; putative transcriptional regulator complement(444035..444520) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818483 YP_005220698.1 CDS Rahaq2_4975 NC_016835.1 444733 445890 R PFAM: Gram-negative porin; outer membrane protein (porin) complement(444733..445890) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818484 YP_005220699.1 CDS Rahaq2_4976 NC_016835.1 446502 446690 R hypothetical protein complement(446502..446690) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818485 YP_005220700.1 CDS Rahaq2_4978 NC_016835.1 447492 448271 D PFAM: short chain dehydrogenase; TIGRFAM: acetoin reductases; acetoin reductase family protein 447492..448271 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818487 YP_005220701.1 CDS Rahaq2_4979 NC_016835.1 448337 449203 R PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(448337..449203) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818488 YP_005220702.1 CDS Rahaq2_4980 NC_016835.1 449293 449919 R PFAM: Bacterial regulatory proteins, tetR family; hypothetical protein complement(449293..449919) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818489 YP_005220703.1 CDS Rahaq2_4981 NC_016835.1 450089 451795 R PFAM: Tannase and feruloyl esterase; tannase and feruloyl esterase complement(450089..451795) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818490 YP_005220704.1 CDS Rahaq2_4982 NC_016835.1 452022 452189 D hypothetical protein 452022..452189 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818491 YP_005220705.1 CDS Rahaq2_4983 NC_016835.1 452218 452391 D hypothetical protein 452218..452391 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818492 YP_005220706.1 CDS Rahaq2_4984 NC_016835.1 452484 454625 R PFAM: Methyltransferase domain; Formylglycine-generating sulfatase enzyme; hypothetical protein complement(452484..454625) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818493 YP_005220707.1 CDS Rahaq2_4985 NC_016835.1 454772 454909 R hypothetical protein complement(454772..454909) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818494 YP_005220708.1 CDS Rahaq2_4986 NC_016835.1 455123 456670 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue; methyl-accepting chemotaxis protein complement(455123..456670) Rahnella aquatilis CIP 78.65 = ATCC 33071 11818495 YP_005220709.1 CDS Rahaq2_4987 NC_016835.1 457520 458014 D PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family; type VI secretion protein 457520..458014 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818496 YP_005220710.1 CDS Rahaq2_4988 NC_016835.1 458052 459593 D PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; type VI secretion protein EvpB 458052..459593 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818497 YP_005220711.1 CDS Rahaq2_4989 NC_016835.1 459609 460958 D PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family; hypothetical protein 459609..460958 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818498 YP_005220712.1 CDS Rahaq2_4990 NC_016835.1 460955 461629 D PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family; DotU family type IV/VI secretion system protein 460955..461629 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818499 YP_005220713.1 CDS Rahaq2_4991 NC_016835.1 461631 463307 D PFAM: OmpA family; outer membrane protein/peptidoglycan-associated (lipo)protein 461631..463307 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818500 YP_005220714.1 CDS Rahaq2_4992 NC_016835.1 463340 463831 D PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; IMG reference gene:2506711594_SP; type VI secretion system effector 463340..463831 Rahnella aquatilis CIP 78.65 = ATCC 33071 11818501 YP_005459729.1 CDS Rahaq2_5114 NC_017092.1 167 598 D PFAM: Domain of unknown function DUF29; manually curated; hypothetical protein 167..598 Rahnella aquatilis CIP 78.65 = ATCC 33071 11954049 YP_005459730.1 CDS Rahaq2_5115 NC_017092.1 1524 1934 R hypothetical protein complement(1524..1934) Rahnella aquatilis CIP 78.65 = ATCC 33071 11954042 YP_005459731.1 CDS Rahaq2_5116 NC_017092.1 4109 4813 R serine/threonine protein phosphatase complement(4109..4813) Rahnella aquatilis CIP 78.65 = ATCC 33071 11954043 YP_005459732.1 CDS Rahaq2_5117 NC_017092.1 4823 5692 R PFAM: Domain of unknown function (DUF1814); hypothetical protein complement(4823..5692) Rahnella aquatilis CIP 78.65 = ATCC 33071 11954044 YP_005459733.1 CDS Rahaq2_5118 NC_017092.1 5705 6602 R manually curated; hypothetical protein complement(join(5705..6196,6198..6602)) Rahnella aquatilis CIP 78.65 = ATCC 33071 11954045 YP_005459734.1 CDS Rahaq2_5119 NC_017092.1 7164 7451 D hypothetical protein 7164..7451 Rahnella aquatilis CIP 78.65 = ATCC 33071 11954046 YP_005459735.1 CDS Rahaq2_5120 NC_017092.1 7684 7905 D PFAM: Protein of unknown function (DUF1471); manually curated; hypothetical protein 7684..7905 Rahnella aquatilis CIP 78.65 = ATCC 33071 11954047 YP_005459736.1 CDS Rahaq2_5121 NC_017092.1 8112 8366 R IMG reference gene:2506712142_SP; hypothetical protein complement(8112..8366) Rahnella aquatilis CIP 78.65 = ATCC 33071 11954048 Rahaq2_0102 tRNA Rahaq2_0102 NC_016818.1 108558 108634 D tRNA-Pro 108558..108634 Rahnella aquatilis CIP 78.65 = ATCC 33071 11789843 Rahaq2_0403 tRNA Rahaq2_0403 NC_016818.1 413192 413268 D tRNA-Ile 413192..413268 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793787 Rahaq2_0404 tRNA Rahaq2_0404 NC_016818.1 413402 413477 D tRNA-Ala 413402..413477 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790107 Rahaq2_0407 tRNA Rahaq2_0407 NC_016818.1 416899 416974 D tRNA-Thr 416899..416974 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790109 Rahaq2_0422 tRNA Rahaq2_0422 NC_016818.1 432689 432764 R tRNA-Phe complement(432689..432764) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790123 Rahaq2_0446 tRNA Rahaq2_0446 NC_016818.1 456302 456377 D tRNA-Gly 456302..456377 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790144 Rahaq2_0447 tRNA Rahaq2_0447 NC_016818.1 456437 456512 D tRNA-Gly 456437..456512 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790145 Rahaq2_0448 tRNA Rahaq2_0448 NC_016818.1 456573 456648 D tRNA-Gly 456573..456648 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790146 Rahaq2_0510 tRNA Rahaq2_0510 NC_016818.1 520870 520956 D tRNA-Leu 520870..520956 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790199 Rahaq2_0511 tRNA Rahaq2_0511 NC_016818.1 521016 521092 D tRNA-Met 521016..521092 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790200 Rahaq2_0631 tRNA Rahaq2_0631 NC_016818.1 667950 668026 R tRNA-Met complement(667950..668026) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790303 Rahaq2_0720 tRNA Rahaq2_0720 NC_016818.1 773138 773230 D tRNA-Ser 773138..773230 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790381 Rahaq2_0721 tRNA Rahaq2_0721 NC_016818.1 773239 773315 D tRNA-Arg 773239..773315 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790382 Rahaq2_0722 tRNA Rahaq2_0722 NC_016818.1 773426 773502 D tRNA-Arg 773426..773502 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790383 Rahaq2_0724 tRNA Rahaq2_0724 NC_016818.1 773683 773759 D tRNA-Arg 773683..773759 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790385 Rahaq2_0770 tRNA Rahaq2_0770 NC_016818.1 810503 810579 D tRNA-Ile 810503..810579 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790424 Rahaq2_0771 tRNA Rahaq2_0771 NC_016818.1 810713 810788 D tRNA-Ala 810713..810788 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793835 Rahaq2_0823 tRNA Rahaq2_0823 NC_016818.1 865544 865617 D tRNA-Gly 865544..865617 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793843 Rahaq2_0900 tRNA Rahaq2_0900 NC_016818.1 948152 948228 R tRNA-Met complement(948152..948228) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790537 Rahaq2_0901 tRNA Rahaq2_0901 NC_016818.1 948302 948378 R tRNA-Met complement(948302..948378) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790538 Rahaq2_0902 tRNA Rahaq2_0902 NC_016818.1 948441 948517 R tRNA-Met complement(948441..948517) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790539 Rahaq2_0960 tRNA Rahaq2_0960 NC_016818.1 1004319 1004394 D tRNA-Glu 1004319..1004394 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790592 Rahaq2_0963 tRNA Rahaq2_0963 NC_016818.1 1007894 1007970 D tRNA-Asp 1007894..1007970 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790595 Rahaq2_0990 tRNA Rahaq2_0990 NC_016818.1 1031564 1031640 D tRNA-Asp 1031564..1031640 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790619 Rahaq2_1039 tRNA Rahaq2_1039 NC_016818.1 1076636 1076711 D tRNA-Thr 1076636..1076711 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790663 Rahaq2_1190 tRNA Rahaq2_1190 NC_016818.1 1236647 1236722 R tRNA-Lys complement(1236647..1236722) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790793 Rahaq2_1191 tRNA Rahaq2_1191 NC_016818.1 1236730 1236805 R tRNA-Val complement(1236730..1236805) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790794 Rahaq2_1192 tRNA Rahaq2_1192 NC_016818.1 1236849 1236924 R tRNA-Val complement(1236849..1236924) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793886 Rahaq2_1193 tRNA Rahaq2_1193 NC_016818.1 1236971 1237046 R tRNA-Val complement(1236971..1237046) Rahnella aquatilis CIP 78.65 = ATCC 33071 11790795 Rahaq2_1196 tRNA Rahaq2_1196 NC_016818.1 1239964 1240039 D tRNA-Ala 1239964..1240039 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790798 Rahaq2_1197 tRNA Rahaq2_1197 NC_016818.1 1240111 1240186 D tRNA-Ala 1240111..1240186 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790799 Rahaq2_1266 tRNA Rahaq2_1266 NC_016818.1 1305460 1305534 R tRNA-Arg complement(1305460..1305534) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793896 Rahaq2_1623 tRNA Rahaq2_1623 NC_016818.1 1717033 1717120 D tRNA-Ser 1717033..1717120 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791167 Rahaq2_1624 tRNA Rahaq2_1624 NC_016818.1 1717320 1717407 D tRNA-Ser 1717320..1717407 Rahnella aquatilis CIP 78.65 = ATCC 33071 11791168 Rahaq2_1749 tRNA Rahaq2_1749 NC_016818.1 1849163 1849238 R tRNA-Asn complement(1849163..1849238) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793963 Rahaq2_1769 tRNA Rahaq2_1769 NC_016818.1 1870603 1870692 R tRNA-Ser complement(1870603..1870692) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791293 Rahaq2_1770 tRNA Rahaq2_1770 NC_016818.1 1870887 1870976 R tRNA-Ser complement(1870887..1870976) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791294 Rahaq2_2007 tRNA Rahaq2_2007 NC_016818.1 2112395 2112470 R tRNA-Asn complement(2112395..2112470) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791502 Rahaq2_2024 tRNA Rahaq2_2024 NC_016818.1 2130615 2130699 R tRNA-Tyr complement(2130615..2130699) Rahnella aquatilis CIP 78.65 = ATCC 33071 11791517 Rahaq2_2649 tRNA Rahaq2_2649 NC_016818.1 2844165 2844240 D tRNA-Asn 2844165..2844240 Rahnella aquatilis CIP 78.65 = ATCC 33071 11794071 Rahaq2_2820 tRNA Rahaq2_2820 NC_016818.1 3037868 3037944 D tRNA-Val 3037868..3037944 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792214 Rahaq2_2821 tRNA Rahaq2_2821 NC_016818.1 3037974 3038050 D tRNA-Val 3037974..3038050 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792215 Rahaq2_3028 tRNA Rahaq2_3028 NC_016818.1 3250122 3250207 R tRNA-Leu complement(3250122..3250207) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792395 Rahaq2_3029 tRNA Rahaq2_3029 NC_016818.1 3250219 3250292 R tRNA-Cys complement(3250219..3250292) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792396 Rahaq2_3030 tRNA Rahaq2_3030 NC_016818.1 3250351 3250426 R tRNA-Gly complement(3250351..3250426) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792397 Rahaq2_3040 tRNA Rahaq2_3040 NC_016818.1 3258655 3258730 R tRNA-Lys complement(3258655..3258730) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792407 Rahaq2_3162 tRNA Rahaq2_3162 NC_016818.1 3378250 3378325 R tRNA-Lys complement(3378250..3378325) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792512 Rahaq2_3163 tRNA Rahaq2_3163 NC_016818.1 3378391 3378466 R tRNA-Lys complement(3378391..3378466) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792513 Rahaq2_3165 tRNA Rahaq2_3165 NC_016818.1 3378670 3378745 R tRNA-Lys complement(3378670..3378745) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792515 Rahaq2_3220 tRNA Rahaq2_3220 NC_016818.1 3440152 3440228 D tRNA-Met 3440152..3440228 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792564 Rahaq2_3221 tRNA Rahaq2_3221 NC_016818.1 3440237 3440321 D tRNA-Leu 3440237..3440321 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792565 Rahaq2_3222 tRNA Rahaq2_3222 NC_016818.1 3440345 3440419 D tRNA-Gln 3440345..3440419 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792566 Rahaq2_3223 tRNA Rahaq2_3223 NC_016818.1 3440490 3440564 D tRNA-Gln 3440490..3440564 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792567 Rahaq2_3224 tRNA Rahaq2_3224 NC_016818.1 3440657 3440733 D tRNA-Met 3440657..3440733 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792568 Rahaq2_3225 tRNA Rahaq2_3225 NC_016818.1 3440778 3440852 D tRNA-Gln 3440778..3440852 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792569 Rahaq2_3279 tRNA Rahaq2_3279 NC_016818.1 3490190 3490266 R tRNA-Arg complement(3490190..3490266) Rahnella aquatilis CIP 78.65 = ATCC 33071 11792615 Rahaq2_3653 tRNA Rahaq2_3653 NC_016818.1 3873068 3873143 D tRNA-Phe 3873068..3873143 Rahnella aquatilis CIP 78.65 = ATCC 33071 11792938 Rahaq2_3937 tRNA Rahaq2_3937 NC_016818.1 4192789 4192874 D tRNA-Leu 4192789..4192874 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793185 Rahaq2_3938 tRNA Rahaq2_3938 NC_016818.1 4192911 4192996 D tRNA-Leu 4192911..4192996 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793186 Rahaq2_3939 tRNA Rahaq2_3939 NC_016818.1 4193038 4193124 D tRNA-Leu 4193038..4193124 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793187 Rahaq2_3982 tRNA Rahaq2_3982 NC_016818.1 4239250 4239334 R tRNA-Leu complement(4239250..4239334) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793224 Rahaq2_4223 tRNA Rahaq2_4223 NC_016818.1 4495754 4495829 R tRNA-Glu complement(4495754..4495829) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793434 Rahaq2_4251 tRNA Rahaq2_4251 NC_016818.1 4526025 4526100 R tRNA-Thr complement(4526025..4526100) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794276 Rahaq2_4252 tRNA Rahaq2_4252 NC_016818.1 4526108 4526182 R tRNA-Gly complement(4526108..4526182) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793459 Rahaq2_4253 tRNA Rahaq2_4253 NC_016818.1 4526313 4526397 R tRNA-Tyr complement(4526313..4526397) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793460 Rahaq2_4254 tRNA Rahaq2_4254 NC_016818.1 4526417 4526492 R tRNA-Thr complement(4526417..4526492) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794277 Rahaq2_4261 tRNA Rahaq2_4261 NC_016818.1 4534222 4534297 R tRNA-Glu complement(4534222..4534297) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793467 Rahaq2_4361 tRNA Rahaq2_4361 NC_016818.1 4643270 4643346 R tRNA-Pro complement(4643270..4643346) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793557 Rahaq2_4362 tRNA Rahaq2_4362 NC_016818.1 4643406 4643491 R tRNA-Leu complement(4643406..4643491) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794288 Rahaq2_4363 tRNA Rahaq2_4363 NC_016818.1 4643521 4643596 R tRNA-His complement(4643521..4643596) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793558 Rahaq2_4364 tRNA Rahaq2_4364 NC_016818.1 4643662 4643738 R tRNA-Arg complement(4643662..4643738) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793559 Rahaq2_4398 tRNA Rahaq2_4398 NC_016818.1 4683044 4683119 R tRNA-Trp complement(4683044..4683119) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793588 Rahaq2_4399 tRNA Rahaq2_4399 NC_016818.1 4683173 4683249 R tRNA-Asp complement(4683173..4683249) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793589 Rahaq2_4402 tRNA Rahaq2_4402 NC_016818.1 4686723 4686798 R tRNA-Ala complement(4686723..4686798) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794294 Rahaq2_4403 tRNA Rahaq2_4403 NC_016818.1 4686932 4687008 R tRNA-Ile complement(4686932..4687008) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793592 Rahaq2_4518 tRNA Rahaq2_4518 NC_016818.1 4812952 4813027 R tRNA-Glu complement(4812952..4813027) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793699 Rahaq2_0402 rRNA Rahaq2_0402 NC_016818.1 411596 413020 D 16S ribosomal RNA 411596..413020 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790106 Rahaq2_0405 rRNA Rahaq2_0405 NC_016818.1 413690 416594 D 23S ribosomal RNA 413690..416594 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790108 Rahaq2_0406 rRNA Rahaq2_0406 NC_016818.1 416733 416848 D 5S ribosomal RNA 416733..416848 Rahnella aquatilis CIP 78.65 = ATCC 33071 11793788 Rahaq2_0408 rRNA Rahaq2_0408 NC_016818.1 417011 417126 D 5S ribosomal RNA 417011..417126 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790110 Rahaq2_0769 rRNA Rahaq2_0769 NC_016818.1 808907 810331 D 16S ribosomal RNA 808907..810331 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790423 Rahaq2_0772 rRNA Rahaq2_0772 NC_016818.1 811001 813905 D 23S ribosomal RNA 811001..813905 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790425 Rahaq2_0773 rRNA Rahaq2_0773 NC_016818.1 814044 814159 D 5S ribosomal RNA 814044..814159 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790426 Rahaq2_0959 rRNA Rahaq2_0959 NC_016818.1 1002651 1004075 D 16S ribosomal RNA 1002651..1004075 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790591 Rahaq2_0961 rRNA Rahaq2_0961 NC_016818.1 1004633 1007537 D 23S ribosomal RNA 1004633..1007537 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790593 Rahaq2_0962 rRNA Rahaq2_0962 NC_016818.1 1007675 1007790 D 5S ribosomal RNA 1007675..1007790 Rahnella aquatilis CIP 78.65 = ATCC 33071 11790594 Rahaq2_4221 rRNA Rahaq2_4221 NC_016818.1 4492357 4492472 R 5S ribosomal RNA complement(4492357..4492472) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793433 Rahaq2_4222 rRNA Rahaq2_4222 NC_016818.1 4492611 4495515 R 23S ribosomal RNA complement(4492611..4495515) Rahnella aquatilis CIP 78.65 = ATCC 33071 11794272 Rahaq2_4224 rRNA Rahaq2_4224 NC_016818.1 4496073 4497497 R 16S ribosomal RNA complement(4496073..4497497) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793435 Rahaq2_4259 rRNA Rahaq2_4259 NC_016818.1 4530826 4530941 R 5S ribosomal RNA complement(4530826..4530941) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793465 Rahaq2_4260 rRNA Rahaq2_4260 NC_016818.1 4531080 4533983 R 23S ribosomal RNA complement(4531080..4533983) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793466 Rahaq2_4262 rRNA Rahaq2_4262 NC_016818.1 4534541 4535965 R 16S ribosomal RNA complement(4534541..4535965) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793468 Rahaq2_4400 rRNA Rahaq2_4400 NC_016818.1 4683353 4683468 R 5S ribosomal RNA complement(4683353..4683468) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793590 Rahaq2_4401 rRNA Rahaq2_4401 NC_016818.1 4683606 4686510 R 23S ribosomal RNA complement(4683606..4686510) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793591 Rahaq2_4404 rRNA Rahaq2_4404 NC_016818.1 4687180 4688604 R 16S ribosomal RNA complement(4687180..4688604) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793593 Rahaq2_4516 rRNA Rahaq2_4516 NC_016818.1 4809555 4809670 R 5S ribosomal RNA complement(4809555..4809670) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793697 Rahaq2_4517 rRNA Rahaq2_4517 NC_016818.1 4809809 4812713 R 23S ribosomal RNA complement(4809809..4812713) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793698 Rahaq2_4519 rRNA Rahaq2_4519 NC_016818.1 4813271 4814695 R 16S ribosomal RNA complement(4813271..4814695) Rahnella aquatilis CIP 78.65 = ATCC 33071 11793701