-- dump date 20120504_160147 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 395491000001 SEQ_END SEQ_END NC_012848.1 828924 828924 DR NC_012848.1; contig end 828924..828924 Rhizobium leguminosarum bv. trifolii WSM1325 395491000002 SEQ_END SEQ_END NC_012850.1 4767043 4767043 DR NC_012850.1; contig end 4767043..4767043 Rhizobium leguminosarum bv. trifolii WSM1325 395491000003 SEQ_END SEQ_END NC_012852.1 350312 350312 DR NC_012852.1; contig end 350312..350312 Rhizobium leguminosarum bv. trifolii WSM1325 395491000004 SEQ_END SEQ_END NC_012853.1 516088 516088 DR NC_012853.1; contig end 516088..516088 Rhizobium leguminosarum bv. trifolii WSM1325 395491000005 SEQ_END SEQ_END NC_012854.1 294782 294782 DR NC_012854.1; contig end 294782..294782 Rhizobium leguminosarum bv. trifolii WSM1325 395491000006 SEQ_END SEQ_END NC_012858.1 660973 660973 DR NC_012858.1; contig end 660973..660973 Rhizobium leguminosarum bv. trifolii WSM1325 YP_002972839.1 CDS Rleg_4642 NC_012848.1 1 1239 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ret:RHE_PF00480 two-component sensor histidine kinase protein; putative signal transduction histidine kinase complement(1..1239) Rhizobium leguminosarum bv. trifolii WSM1325 8007401 YP_002972840.1 CDS Rleg_4643 NC_012848.1 1520 2536 D KEGG: ret:RHE_PF00481 sugar ABC transporter, substrate-binding protein; sugar ABC transporter substrate-binding protein 1520..2536 Rhizobium leguminosarum bv. trifolii WSM1325 8007122 YP_002972841.1 CDS Rleg_4644 NC_012848.1 2609 4057 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PF00482 sugar ABC transporter, ATP binding protein; ABC transporter-like protein 2609..4057 Rhizobium leguminosarum bv. trifolii WSM1325 8007123 YP_002972842.1 CDS Rleg_4645 NC_012848.1 4054 5001 D PFAM: inner-membrane translocator; KEGG: ret:RHE_PF00483 sugar ABC transporter, permease protein; inner-membrane translocator 4054..5001 Rhizobium leguminosarum bv. trifolii WSM1325 8007124 YP_002972843.1 CDS Rleg_4646 NC_012848.1 4998 5948 D PFAM: inner-membrane translocator; KEGG: ret:RHE_PF00484 sugar ABC transporter, permease protein; inner-membrane translocator 4998..5948 Rhizobium leguminosarum bv. trifolii WSM1325 8007125 YP_002972844.1 CDS Rleg_4647 NC_012848.1 5963 6877 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ret:RHE_PF00485 gluconolactonase precursor protein; Gluconolactonase 5963..6877 Rhizobium leguminosarum bv. trifolii WSM1325 8007126 YP_002972845.1 CDS Rleg_4648 NC_012848.1 7276 12411 D KEGG: vei:Veis_3689 hypothetical protein; hypothetical protein 7276..12411 Rhizobium leguminosarum bv. trifolii WSM1325 8007127 YP_002972846.1 CDS Rleg_4649 NC_012848.1 12598 13041 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sil:SPO2584 glyoxalase family protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(12598..13041) Rhizobium leguminosarum bv. trifolii WSM1325 8007128 YP_002972847.1 CDS Rleg_4651 NC_012848.1 14781 15134 R PFAM: IS66 Orf2 family protein; KEGG: transposase; IS66 Orf2 family protein complement(14781..15134) Rhizobium leguminosarum bv. trifolii WSM1325 8007370 YP_002972848.1 CDS Rleg_4652 NC_012848.1 15131 15538 R PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PD00122 hypothetical protein; transposase IS3/IS911 family protein complement(15131..15538) Rhizobium leguminosarum bv. trifolii WSM1325 8007130 YP_002972849.1 CDS Rleg_4653 NC_012848.1 15736 16962 R PFAM: major facilitator superfamily MFS_1; KEGG: sme:SM_b20338 putative efflux protein; major facilitator superfamily protein complement(15736..16962) Rhizobium leguminosarum bv. trifolii WSM1325 8007131 YP_002972850.1 CDS Rleg_4654 NC_012848.1 17082 17681 D PFAM: regulatory protein TetR; KEGG: sme:SM_b20337 putative transcriptional regulator protein; TetR family transcriptional regulator 17082..17681 Rhizobium leguminosarum bv. trifolii WSM1325 8007132 YP_002972851.1 CDS Rleg_4655 NC_012848.1 17868 19205 D PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: rec:RHECIAT_PA0000198 putative epoxide hydrolase protein; Epoxide hydrolase domain-containing protein 17868..19205 Rhizobium leguminosarum bv. trifolii WSM1325 8007133 YP_002972852.1 CDS Rleg_4656 NC_012848.1 19330 19941 R KEGG: atc:AGR_pAT_742 conserved hypothetical protein; hypothetical protein complement(19330..19941) Rhizobium leguminosarum bv. trifolii WSM1325 8007134 YP_002972853.1 CDS Rleg_4657 NC_012848.1 19934 20863 R PFAM: protein of unknown function DUF182; KEGG: hypothetical protein ; K07402 xanthine dehydrogenase accessory factor; hypothetical protein complement(19934..20863) Rhizobium leguminosarum bv. trifolii WSM1325 8007135 YP_002972854.1 CDS Rleg_4658 NC_012848.1 20920 23118 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dehydrogenase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(20920..23118) Rhizobium leguminosarum bv. trifolii WSM1325 8007136 YP_002972855.1 CDS Rleg_4659 NC_012848.1 23122 24072 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: oxidoreductase; molybdopterin dehydrogenase FAD-binding complement(23122..24072) Rhizobium leguminosarum bv. trifolii WSM1325 8007137 YP_002972856.1 CDS Rleg_4660 NC_012848.1 24069 24716 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: oxidoreductase with iron-sulfur subunit; putative xanthine dehydrogenase iron-sulfur-binding subunit complement(24069..24716) Rhizobium leguminosarum bv. trifolii WSM1325 8007138 YP_002972857.1 CDS Rleg_4661 NC_012848.1 24949 25815 D PFAM: Creatininase; KEGG: rec:RHECIAT_PC0000101 probable creatininase protein; Creatininase 24949..25815 Rhizobium leguminosarum bv. trifolii WSM1325 8007139 YP_002972858.1 CDS Rleg_4662 NC_012848.1 25778 26767 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH02047 LysR family transcriptional regulator; LysR family transcriptional regulator complement(25778..26767) Rhizobium leguminosarum bv. trifolii WSM1325 8007140 YP_002972859.1 CDS Rleg_4663 NC_012848.1 26952 27968 D PFAM: NMT1/THI5 like domain protein; KEGG: ret:RHE_CH02046 nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein; NMT1/THI5 like domain-containing protein 26952..27968 Rhizobium leguminosarum bv. trifolii WSM1325 8007141 YP_002972860.1 CDS Rleg_4664 NC_012848.1 28036 28860 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH02045 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; ABC transporter-like protein 28036..28860 Rhizobium leguminosarum bv. trifolii WSM1325 8007142 YP_002972861.1 CDS Rleg_4665 NC_012848.1 28860 29714 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02044 nitrate/sulfonate/bicarbonate ABC transporter permease; binding-protein-dependent transport systems inner membrane component 28860..29714 Rhizobium leguminosarum bv. trifolii WSM1325 8007143 YP_002972862.1 CDS Rleg_4666 NC_012848.1 29714 31027 D PFAM: Amidohydrolase 3; amidohydrolase; KEGG: ret:RHE_CH02043 cytosine deaminase; cytosine deaminase-like protein 29714..31027 Rhizobium leguminosarum bv. trifolii WSM1325 8007144 YP_002972863.1 CDS Rleg_4667 NC_012848.1 31029 32438 D PFAM: FAD linked oxidase domain protein; KEGG: rec:RHECIAT_PC0000095 putative FAD linked oxidase protein; FAD linked oxidase domain-containing protein 31029..32438 Rhizobium leguminosarum bv. trifolii WSM1325 8007145 YP_002972864.1 CDS Rleg_4668 NC_012848.1 32435 33016 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: ret:RHE_CH02041 NAD(P)H dehydrogenase protein; NAD(P)H dehydrogenase (quinone) 32435..33016 Rhizobium leguminosarum bv. trifolii WSM1325 8007146 YP_002972865.1 CDS Rleg_4669 NC_012848.1 33013 33402 R PFAM: Endoribonuclease L-PSP; KEGG: translation initiation inhibitor protein; Endoribonuclease L-PSP complement(33013..33402) Rhizobium leguminosarum bv. trifolii WSM1325 8007147 YP_002972866.1 CDS Rleg_4670 NC_012848.1 33592 35469 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_PC0000675 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(33592..35469) Rhizobium leguminosarum bv. trifolii WSM1325 8007148 YP_002972867.1 CDS Rleg_4672 NC_012848.1 36362 37144 R PFAM: ferric iron reductase; KEGG: ret:RHE_PF00468 ferric iron reductase protein; ferric iron reductase complement(36362..37144) Rhizobium leguminosarum bv. trifolii WSM1325 8007371 YP_002972868.1 CDS Rleg_4673 NC_012848.1 37154 39337 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ret:RHE_PF00469 ferrichrome-iron transporter, receptor protein; TonB-dependent siderophore receptor complement(37154..39337) Rhizobium leguminosarum bv. trifolii WSM1325 8007150 YP_002972869.1 CDS Rleg_4674 NC_012848.1 39576 40001 R PFAM: PilT protein domain protein; KEGG: gox:GOX2696 plasmid stabilization protein; PilT protein domain-containing protein complement(39576..40001) Rhizobium leguminosarum bv. trifolii WSM1325 8007151 YP_002972870.1 CDS Rleg_4675 NC_012848.1 39998 40261 R KEGG: swi:Swit_3888 hypothetical protein; hypothetical protein complement(39998..40261) Rhizobium leguminosarum bv. trifolii WSM1325 8007152 YP_002972871.1 CDS Rleg_4676 NC_012848.1 40559 41131 R PFAM: regulatory protein TetR; KEGG: bja:blr7984 transcriptional regulatory protein; TetR family transcriptional regulator complement(40559..41131) Rhizobium leguminosarum bv. trifolii WSM1325 8007153 YP_002972872.1 CDS Rleg_4678 NC_012848.1 41636 41863 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ret:RHE_PA00005 hypothetical protein; Peptidoglycan-binding domain 1 protein 41636..41863 Rhizobium leguminosarum bv. trifolii WSM1325 8007372 YP_002972873.1 CDS Rleg_4679 NC_012848.1 42228 43664 D PFAM: AAA-4 family protein; KEGG: hypothetical cytosolic protein; putative transcriptional regulator 42228..43664 Rhizobium leguminosarum bv. trifolii WSM1325 8007155 YP_002972874.1 CDS Rleg_4680 NC_012848.1 43925 45142 D KEGG: sme:SMa2301 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 43925..45142 Rhizobium leguminosarum bv. trifolii WSM1325 8007156 YP_002972875.1 CDS Rleg_4681 NC_012848.1 45293 46036 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator protein; GntR domain-containing protein 45293..46036 Rhizobium leguminosarum bv. trifolii WSM1325 8007157 YP_002972876.1 CDS Rleg_4682 NC_012848.1 46020 47618 D PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_CH00609 oligopeptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein 46020..47618 Rhizobium leguminosarum bv. trifolii WSM1325 8007158 YP_002972877.1 CDS Rleg_4683 NC_012848.1 47732 48649 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: appB; oligopeptide ABC transporter ; K02033 peptide/nickel transport system permease protein; binding-protein-dependent transport systems inner membrane component 47732..48649 Rhizobium leguminosarum bv. trifolii WSM1325 8007159 YP_002972878.1 CDS Rleg_4684 NC_012848.1 48652 49530 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: appC; oligopeptide ABC transporter ; K02034 peptide/nickel transport system permease protein; binding-protein-dependent transport systems inner membrane component 48652..49530 Rhizobium leguminosarum bv. trifolii WSM1325 8007160 YP_002972879.1 CDS Rleg_4685 NC_012848.1 49549 50466 D PFAM: dihydrodipicolinate synthetase; KEGG: dapAch1; dihydrodipicolinate synthase protein ; K01714 dihydrodipicolinate synthase; dihydrodipicolinate synthetase 49549..50466 Rhizobium leguminosarum bv. trifolii WSM1325 8007161 YP_002972880.1 CDS Rleg_4686 NC_012848.1 50475 51491 D KEGG: ret:RHE_CH00605 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 50475..51491 Rhizobium leguminosarum bv. trifolii WSM1325 8007162 YP_002972881.1 CDS Rleg_4687 NC_012848.1 51492 52445 D KEGG: ret:RHE_CH00604 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 51492..52445 Rhizobium leguminosarum bv. trifolii WSM1325 8007163 YP_002972882.1 CDS Rleg_4688 NC_012848.1 52472 53407 D PFAM: dihydrodipicolinate synthetase; KEGG: rec:RHECIAT_CH0000678 putative N-acetylneuraminate lyase subunit protein; dihydrodipicolinate synthetase 52472..53407 Rhizobium leguminosarum bv. trifolii WSM1325 8007164 YP_002972883.1 CDS Rleg_4689 NC_012848.1 53512 54276 R PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: reh:H16_A1299 transcriptional regulator, IclR-family; IclR family transcriptional regulator complement(53512..54276) Rhizobium leguminosarum bv. trifolii WSM1325 8007165 YP_002972884.1 CDS Rleg_4690 NC_012848.1 54470 56044 D PFAM: extracellular solute-binding protein family 5; KEGG: pol:Bpro_2532 extracellular solute-binding protein, family 5; family 5 extracellular solute-binding protein 54470..56044 Rhizobium leguminosarum bv. trifolii WSM1325 8007166 YP_002972885.1 CDS Rleg_4691 NC_012848.1 56192 57046 D KEGG: bav:BAV2615 poly(aspartic acid) hydrolase; poly(aspartic acid) hydrolase 56192..57046 Rhizobium leguminosarum bv. trifolii WSM1325 8007167 YP_002972886.1 CDS Rleg_4692 NC_012848.1 57043 58653 D KEGG: rpd:RPD_2474 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 57043..58653 Rhizobium leguminosarum bv. trifolii WSM1325 8007168 YP_002972887.1 CDS Rleg_4693 NC_012848.1 58718 59692 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1563 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 58718..59692 Rhizobium leguminosarum bv. trifolii WSM1325 8007169 YP_002972888.1 CDS Rleg_4694 NC_012848.1 59697 60611 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1562 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 59697..60611 Rhizobium leguminosarum bv. trifolii WSM1325 8007170 YP_002972889.1 CDS Rleg_4695 NC_012848.1 60608 61585 D KEGG: bav:BAV1561 ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 60608..61585 Rhizobium leguminosarum bv. trifolii WSM1325 8007171 YP_002972890.1 CDS Rleg_4696 NC_012848.1 61585 62589 D KEGG: bav:BAV1560 ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 61585..62589 Rhizobium leguminosarum bv. trifolii WSM1325 8007172 YP_002972891.1 CDS Rleg_4697 NC_012848.1 62809 63483 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_PF00470 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 62809..63483 Rhizobium leguminosarum bv. trifolii WSM1325 8007173 YP_002972892.1 CDS Rleg_4698 NC_012848.1 63480 64034 D PFAM: OmpA/MotB domain protein; KEGG: rec:RHECIAT_PC0000696 probable outer membrane lipoprotein; OmpA/MotB domain-containing protein 63480..64034 Rhizobium leguminosarum bv. trifolii WSM1325 8007174 YP_002972893.1 CDS Rleg_4700 NC_012848.1 66731 67405 D PFAM: regulatory protein TetR; KEGG: ret:RHE_PF00474 TetR family transcriptional regulator; TetR family transcriptional regulator 66731..67405 Rhizobium leguminosarum bv. trifolii WSM1325 8007373 YP_002972894.1 CDS Rleg_4701 NC_012848.1 67414 68256 R KEGG: rec:RHECIAT_PC0000707 putative hydrolase protein; putative hydrolase protein complement(67414..68256) Rhizobium leguminosarum bv. trifolii WSM1325 8007176 YP_002972895.1 CDS Rleg_4702 NC_012848.1 68381 69298 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PF00476 transcriptional regulator protein; LysR family transcriptional regulator 68381..69298 Rhizobium leguminosarum bv. trifolii WSM1325 8007177 YP_002972896.1 CDS Rleg_4703 NC_012848.1 69352 69951 R PFAM: RES domain protein; KEGG: mes:Meso_4168 hypothetical protein; RES domain-containing protein complement(69352..69951) Rhizobium leguminosarum bv. trifolii WSM1325 8007178 YP_002972897.1 CDS Rleg_4704 NC_012848.1 69948 70670 R KEGG: hypothetical protein; hypothetical protein complement(69948..70670) Rhizobium leguminosarum bv. trifolii WSM1325 8007179 YP_002972898.1 CDS Rleg_4705 NC_012848.1 70820 73846 R PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: rec:RHECIAT_PC0000709 putative alpha-mannosidase protein; glycoside hydrolase family protein complement(70820..73846) Rhizobium leguminosarum bv. trifolii WSM1325 8007180 YP_002972899.1 CDS Rleg_4706 NC_012848.1 74121 75140 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ret:RHE_PE00360 LacI family transcriptional regulator; LacI family transcriptional regulator complement(74121..75140) Rhizobium leguminosarum bv. trifolii WSM1325 8007181 YP_002972900.1 CDS Rleg_4707 NC_012848.1 75310 76569 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PE00359 sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein 75310..76569 Rhizobium leguminosarum bv. trifolii WSM1325 8007182 YP_002972901.1 CDS Rleg_4708 NC_012848.1 76633 77514 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00358 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 76633..77514 Rhizobium leguminosarum bv. trifolii WSM1325 8007183 YP_002972902.1 CDS Rleg_4709 NC_012848.1 77507 78343 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00357 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 77507..78343 Rhizobium leguminosarum bv. trifolii WSM1325 8007184 YP_002972903.1 CDS Rleg_4710 NC_012848.1 78357 79499 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00356 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein 78357..79499 Rhizobium leguminosarum bv. trifolii WSM1325 8007185 YP_002972904.1 CDS Rleg_4711 NC_012848.1 79641 81014 D KEGG: ret:RHE_PE00355 putative inulin fructotransferase protein; Inulin fructotransferase 79641..81014 Rhizobium leguminosarum bv. trifolii WSM1325 8007186 YP_002972905.1 CDS Rleg_4712 NC_012848.1 81071 82795 D PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: ret:RHE_PE00354 putative beta-fructofuranosidase protein; Glycosyl hydrolase family 32 domain-containing protein 81071..82795 Rhizobium leguminosarum bv. trifolii WSM1325 8007187 YP_002972906.1 CDS Rleg_4713 NC_012848.1 82936 83127 D hypothetical protein 82936..83127 Rhizobium leguminosarum bv. trifolii WSM1325 8007188 YP_002972907.1 CDS Rleg_4714 NC_012848.1 83261 84400 D KEGG: rec:RHECIAT_PC0000979 putative transcriptional regulator protein, ROK family; ROK family transcriptional regulator 83261..84400 Rhizobium leguminosarum bv. trifolii WSM1325 8007189 YP_002972908.1 CDS Rleg_4715 NC_012848.1 84412 85470 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_PF00564 oxidoreductase protein; oxidoreductase domain-containing protein complement(84412..85470) Rhizobium leguminosarum bv. trifolii WSM1325 8007190 YP_002972909.1 CDS Rleg_4716 NC_012848.1 85828 87126 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_PC0000981 putative sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein 85828..87126 Rhizobium leguminosarum bv. trifolii WSM1325 8007191 YP_002972910.1 CDS Rleg_4717 NC_012848.1 87197 88126 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000982 putative sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 87197..88126 Rhizobium leguminosarum bv. trifolii WSM1325 8007192 YP_002972911.1 CDS Rleg_4718 NC_012848.1 88123 88965 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000983 putative sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 88123..88965 Rhizobium leguminosarum bv. trifolii WSM1325 8007193 YP_002972912.1 CDS Rleg_4719 NC_012848.1 89004 90242 D PFAM: ROK family protein; KEGG: rec:RHECIAT_PC0000984 probable transcriptional regulator protein, ROK family; ROK family protein 89004..90242 Rhizobium leguminosarum bv. trifolii WSM1325 8007194 YP_002972913.1 CDS Rleg_4720 NC_012848.1 90290 91144 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rec:RHECIAT_PC0000985 putative xylose isomerase domain protein; xylose isomerase domain-containing protein 90290..91144 Rhizobium leguminosarum bv. trifolii WSM1325 8007195 YP_002972914.1 CDS Rleg_4721 NC_012848.1 91167 92228 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00570 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein 91167..92228 Rhizobium leguminosarum bv. trifolii WSM1325 8007196 YP_002972915.1 CDS Rleg_4722 NC_012848.1 92344 92817 R PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: rec:RHECIAT_PC0000003 hypothetical protein; ProQ activator of osmoprotectant transporter ProP complement(92344..92817) Rhizobium leguminosarum bv. trifolii WSM1325 8007197 YP_002972916.1 CDS panC NC_012848.1 93095 94024 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 93095..94024 Rhizobium leguminosarum bv. trifolii WSM1325 8007198 YP_002972917.1 CDS panB NC_012848.1 94021 94842 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 94021..94842 Rhizobium leguminosarum bv. trifolii WSM1325 8007199 YP_002972918.1 CDS Rleg_4725 NC_012848.1 94864 95778 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_PC0000006 hydrogen peroxide sensing transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(94864..95778) Rhizobium leguminosarum bv. trifolii WSM1325 8007200 YP_002972919.1 CDS Rleg_4726 NC_012848.1 95922 98111 D TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: ret:RHE_PF00004 catalase protein; catalase/peroxidase HPI 95922..98111 Rhizobium leguminosarum bv. trifolii WSM1325 8007201 YP_002972920.1 CDS Rleg_4728 NC_012848.1 98461 99018 R KEGG: rec:RHECIAT_PC0000010 hypothetical protein; hypothetical protein complement(98461..99018) Rhizobium leguminosarum bv. trifolii WSM1325 8007374 YP_002972921.1 CDS Rleg_4729 NC_012848.1 99151 99420 D KEGG: scl:sce1418 sensor histidine kinase; hypothetical protein 99151..99420 Rhizobium leguminosarum bv. trifolii WSM1325 8007500 YP_002972922.1 CDS Rleg_4731 NC_012848.1 99894 100361 R PFAM: protein of unknown function DUF1486; Limonene-12-epoxide hydrolase; KEGG: rec:RHECIAT_PC0000014 hypothetical protein; hypothetical protein complement(99894..100361) Rhizobium leguminosarum bv. trifolii WSM1325 8007375 YP_002972923.1 CDS Rleg_4732 NC_012848.1 100480 100866 D PFAM: helix-turn-helix HxlR type; KEGG: rec:RHECIAT_PC0000015 putative transcriptional regulator protein; HxlR family transcriptional regulator 100480..100866 Rhizobium leguminosarum bv. trifolii WSM1325 8007281 YP_002972924.1 CDS Rleg_4733 NC_012848.1 100879 101847 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_PC0000016 probable zinc-dependent oxidoreductase protein; alcohol dehydrogenase GroES domain-containing protein complement(100879..101847) Rhizobium leguminosarum bv. trifolii WSM1325 8007469 YP_002972925.1 CDS Rleg_4734 NC_012848.1 101900 102316 D PFAM: thioesterase superfamily protein; KEGG: ret:RHE_PF00012 thioesterase protein; thioesterase superfamily protein 101900..102316 Rhizobium leguminosarum bv. trifolii WSM1325 8007470 YP_002972926.1 CDS Rleg_4735 NC_012848.1 102346 103875 D PFAM: AMP-dependent synthetase and ligase; KEGG: rec:RHECIAT_PC0000018 putative long-chain-fatty-acid--CoA ligase protein; AMP-dependent synthetase and ligase 102346..103875 Rhizobium leguminosarum bv. trifolii WSM1325 8007471 YP_002972927.1 CDS Rleg_4736 NC_012848.1 103853 105058 D KEGG: ret:RHE_PF00014 acetyl-CoA acetyltransferase (beta-ketothiolase) protein; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 103853..105058 Rhizobium leguminosarum bv. trifolii WSM1325 8007472 YP_002972928.1 CDS Rleg_4737 NC_012848.1 105079 105537 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:blr7595 hypothetical protein; alkylhydroperoxidase-like protein complement(105079..105537) Rhizobium leguminosarum bv. trifolii WSM1325 8006959 YP_002972929.1 CDS Rleg_4738 NC_012848.1 105922 106686 D PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_PF00017 hypothetical protein; NmrA family protein 105922..106686 Rhizobium leguminosarum bv. trifolii WSM1325 8006960 YP_002972930.1 CDS Rleg_4739 NC_012848.1 106730 107143 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_PF00018 hypothetical protein; Cupin 2 conserved barrel domain-containing protein 106730..107143 Rhizobium leguminosarum bv. trifolii WSM1325 8006961 YP_002972931.1 CDS Rleg_4740 NC_012848.1 107194 108477 R catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase complement(107194..108477) Rhizobium leguminosarum bv. trifolii WSM1325 8006962 YP_002972932.1 CDS Rleg_4741 NC_012848.1 108551 109630 R TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: rec:RHECIAT_PC0000025 putative ribonuclease protein; ribonuclease BN complement(108551..109630) Rhizobium leguminosarum bv. trifolii WSM1325 8006963 YP_002972933.1 CDS Rleg_4742 NC_012848.1 111695 112336 D hypothetical protein 111695..112336 Rhizobium leguminosarum bv. trifolii WSM1325 8006964 YP_002972934.1 CDS Rleg_4743 NC_012848.1 112352 112612 D hypothetical protein 112352..112612 Rhizobium leguminosarum bv. trifolii WSM1325 8006965 YP_002972935.1 CDS Rleg_4745 NC_012848.1 113441 114331 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: oca:OCAR_7492 protein-L-isoaspartate; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(113441..114331) Rhizobium leguminosarum bv. trifolii WSM1325 8007376 YP_002972936.1 CDS Rleg_4746 NC_012848.1 114573 115082 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_PC0000167 putative acetyltransferase protein; GCN5-like N-acetyltransferase complement(114573..115082) Rhizobium leguminosarum bv. trifolii WSM1325 8006967 YP_002972937.1 CDS Rleg_4747 NC_012848.1 115236 116306 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sugar ABC transporter; ABC transporter-like protein complement(115236..116306) Rhizobium leguminosarum bv. trifolii WSM1325 8006968 YP_002972938.1 CDS Rleg_4748 NC_012848.1 116318 117838 R KEGG: hypothetical protein; hypothetical protein complement(116318..117838) Rhizobium leguminosarum bv. trifolii WSM1325 8006969 YP_002972939.1 CDS Rleg_4749 NC_012848.1 117873 118757 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter ; K02026 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component complement(117873..118757) Rhizobium leguminosarum bv. trifolii WSM1325 8006970 YP_002972940.1 CDS Rleg_4750 NC_012848.1 118754 119653 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter ; K02025 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component complement(118754..119653) Rhizobium leguminosarum bv. trifolii WSM1325 8007473 YP_002972941.1 CDS Rleg_4751 NC_012848.1 119746 120999 R PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter; family 1 extracellular solute-binding protein complement(119746..120999) Rhizobium leguminosarum bv. trifolii WSM1325 8007004 YP_002972942.1 CDS Rleg_4752 NC_012848.1 121071 121715 R TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rec:RHECIAT_PC0000976 probable dihydroxyacetone kinase protein, phosphatase domain; dihydroxyacetone kinase, L subunit complement(121071..121715) Rhizobium leguminosarum bv. trifolii WSM1325 8007005 YP_002972943.1 CDS Rleg_4753 NC_012848.1 121719 122723 R PFAM: Dak kinase; KEGG: rec:RHECIAT_PC0000975 probable dihydroxyacetone kinase protein, kinase domain; Glycerone kinase complement(121719..122723) Rhizobium leguminosarum bv. trifolii WSM1325 8007006 YP_002972944.1 CDS Rleg_4754 NC_012848.1 122779 124641 R KEGG: rec:RHECIAT_PC0000974 hypothetical protein; hypothetical protein complement(122779..124641) Rhizobium leguminosarum bv. trifolii WSM1325 8007007 YP_002972945.1 CDS Rleg_4755 NC_012848.1 124638 125672 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_PF00033 oxidoreductase protein; oxidoreductase domain-containing protein complement(124638..125672) Rhizobium leguminosarum bv. trifolii WSM1325 8007008 YP_002972946.1 CDS Rleg_4756 NC_012848.1 125674 126738 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000972 putative ribose ABC transporter, permease protein; inner-membrane translocator complement(125674..126738) Rhizobium leguminosarum bv. trifolii WSM1325 8007009 YP_002972947.1 CDS Rleg_4757 NC_012848.1 126735 128285 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000971 probable ribose ABC transporter, ATP-binding protein; ABC transporter-like protein complement(126735..128285) Rhizobium leguminosarum bv. trifolii WSM1325 8007010 YP_002972948.1 CDS Rleg_4758 NC_012848.1 128282 128926 R KEGG: rec:RHECIAT_PC0000970 hypothetical protein; hypothetical protein complement(128282..128926) Rhizobium leguminosarum bv. trifolii WSM1325 8007011 YP_002972949.1 CDS Rleg_4759 NC_012848.1 129000 129941 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rec:RHECIAT_PC0000969 probable ribose ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(129000..129941) Rhizobium leguminosarum bv. trifolii WSM1325 8007012 YP_002972950.1 CDS Rleg_4760 NC_012848.1 130017 130844 R KEGG: ret:RHE_PF00038 hypothetical protein; hypothetical protein complement(130017..130844) Rhizobium leguminosarum bv. trifolii WSM1325 8007013 YP_002972951.1 CDS Rleg_4761 NC_012848.1 130991 132337 R PFAM: type III effector Hrp-dependent outers; KEGG: rec:RHECIAT_PC0000965 hypothetical protein; Hrp-dependent type III effector protein complement(130991..132337) Rhizobium leguminosarum bv. trifolii WSM1325 8007014 YP_002972952.1 CDS Rleg_4762 NC_012848.1 132334 133590 R PFAM: ribulose bisphosphate carboxylase large chain; KEGG: rec:RHECIAT_PC0000964 ribulose bisphosphate carboxylaseoxygenase protein, large subunit; RuBisCO-like protein complement(132334..133590) Rhizobium leguminosarum bv. trifolii WSM1325 8007015 YP_002972953.1 CDS Rleg_4763 NC_012848.1 133764 134471 D Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; transcriptional regulator NanR 133764..134471 Rhizobium leguminosarum bv. trifolii WSM1325 8007016 YP_002972954.1 CDS Rleg_4764 NC_012848.1 134649 134969 D KEGG: rec:RHECIAT_PC0000032 hypothetical protein; hypothetical protein 134649..134969 Rhizobium leguminosarum bv. trifolii WSM1325 8007017 YP_002972955.1 CDS Rleg_4765 NC_012848.1 135639 136373 R KEGG: rec:RHECIAT_PC0000054 hypothetical protein; putative Crp/Fnr family transcriptional regulator complement(135639..136373) Rhizobium leguminosarum bv. trifolii WSM1325 8007018 YP_002972956.1 CDS Rleg_4766 NC_012848.1 136527 137912 R KEGG: ret:RHE_PF00065 putative two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase complement(136527..137912) Rhizobium leguminosarum bv. trifolii WSM1325 8007019 YP_002972957.1 CDS Rleg_4767 NC_012848.1 138499 139257 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_PC0000057 probable transcriptional regulator protein, GntR family; GntR domain-containing protein 138499..139257 Rhizobium leguminosarum bv. trifolii WSM1325 8007020 YP_002972958.1 CDS Rleg_4768 NC_012848.1 139281 140255 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ret:RHE_PF00068 C4-dicarboxylate ABC transporter, substrate-binding protein; TRAP dicarboxylate transporter subunit DctP 139281..140255 Rhizobium leguminosarum bv. trifolii WSM1325 8007021 YP_002972959.1 CDS Rleg_4769 NC_012848.1 140374 140946 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ret:RHE_PF00069 C4-dicarboxylate ABC transporter permease; Tripartite ATP-independent periplasmic transporter DctQ component 140374..140946 Rhizobium leguminosarum bv. trifolii WSM1325 8007022 YP_002972960.1 CDS Rleg_4770 NC_012848.1 140951 142357 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rec:RHECIAT_PC0000060 probable C4-dicarboxylate ABC transporter, permease protein; TRAP dicarboxylate transporter subunit DctM 140951..142357 Rhizobium leguminosarum bv. trifolii WSM1325 8007023 YP_002972961.1 CDS Rleg_4771 NC_012848.1 142367 143401 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_PC0000061 probable zinc-dependent alcohol dehydrogenase protein; alcohol dehydrogenase GroES domain-containing protein 142367..143401 Rhizobium leguminosarum bv. trifolii WSM1325 8007024 YP_002972962.1 CDS Rleg_4772 NC_012848.1 143624 144331 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_PC0000064 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator 143624..144331 Rhizobium leguminosarum bv. trifolii WSM1325 8007025 YP_002972963.1 CDS Rleg_4773 NC_012848.1 144379 145266 D PFAM: dihydrodipicolinate synthetase; KEGG: rec:RHECIAT_PC0000063 putative dihydrodipicolinate synthetase protein; dihydrodipicolinate synthetase 144379..145266 Rhizobium leguminosarum bv. trifolii WSM1325 8007026 YP_002972964.1 CDS Rleg_4774 NC_012848.1 145268 146614 D PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_PC0000062 putative oxidoreductase protein, NAD-binding site; FAD dependent oxidoreductase 145268..146614 Rhizobium leguminosarum bv. trifolii WSM1325 8007027 YP_002972965.1 CDS Rleg_4775 NC_012848.1 146710 147174 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ret:RHE_PF00438 alanine catabolic operon transcription regulator; AsnC family transcriptional regulator complement(146710..147174) Rhizobium leguminosarum bv. trifolii WSM1325 8007028 YP_002972966.1 CDS Rleg_4776 NC_012848.1 147300 148433 D KEGG: ret:RHE_PF00437 alanine racemase protein; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 147300..148433 Rhizobium leguminosarum bv. trifolii WSM1325 8007029 YP_002972967.1 CDS Rleg_4777 NC_012848.1 148463 149713 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 148463..149713 Rhizobium leguminosarum bv. trifolii WSM1325 8007030 YP_002972968.1 CDS Rleg_4778 NC_012848.1 149797 150819 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_PF00435 AraC family transcriptional regulator; AraC family transcriptional regulator 149797..150819 Rhizobium leguminosarum bv. trifolii WSM1325 8007031 YP_002972969.1 CDS Rleg_4779 NC_012848.1 150893 152053 R KEGG: rec:RHECIAT_CH0002235 probable hippurate hydrolase protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; amidohydrolase complement(150893..152053) Rhizobium leguminosarum bv. trifolii WSM1325 8007032 YP_002972970.1 CDS Rleg_4780 NC_012848.1 152050 153297 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(152050..153297) Rhizobium leguminosarum bv. trifolii WSM1325 8007033 YP_002972971.1 CDS Rleg_4781 NC_012848.1 153294 154505 R catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase complement(153294..154505) Rhizobium leguminosarum bv. trifolii WSM1325 8007034 YP_002972972.1 CDS Rleg_4782 NC_012848.1 154611 155093 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: smd:Smed_5075 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 154611..155093 Rhizobium leguminosarum bv. trifolii WSM1325 8007035 YP_002972973.1 CDS Rleg_4783 NC_012848.1 155142 156476 R catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase complement(155142..156476) Rhizobium leguminosarum bv. trifolii WSM1325 8007036 YP_002972974.1 CDS Rleg_4784 NC_012848.1 156621 157169 D PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ret:RHE_PF00433 MerR family transcriptional regulator; XRE family transcriptional regulator 156621..157169 Rhizobium leguminosarum bv. trifolii WSM1325 8007037 YP_002972975.1 CDS Rleg_4785 NC_012848.1 157166 157948 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(157166..157948) Rhizobium leguminosarum bv. trifolii WSM1325 8007038 YP_002972976.1 CDS Rleg_4786 NC_012848.1 158262 158846 R KEGG: rec:RHECIAT_PC0000636 hypothetical protein; hypothetical protein complement(158262..158846) Rhizobium leguminosarum bv. trifolii WSM1325 8007039 YP_002972977.1 CDS Rleg_4787 NC_012848.1 158848 159378 R PFAM: TadE family protein; KEGG: rec:RHECIAT_PC0000635 hypothetical protein; TadE family protein complement(158848..159378) Rhizobium leguminosarum bv. trifolii WSM1325 8007040 YP_002972978.1 CDS Rleg_4788 NC_012848.1 159375 160760 R KEGG: ret:RHE_PF00423 hypothetical protein; hypothetical protein complement(159375..160760) Rhizobium leguminosarum bv. trifolii WSM1325 8007041 YP_002972979.1 CDS Rleg_4789 NC_012848.1 160901 161002 D hypothetical protein 160901..161002 Rhizobium leguminosarum bv. trifolii WSM1325 8007042 YP_002972980.1 CDS Rleg_4790 NC_012848.1 161143 161856 R member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(161143..161856) Rhizobium leguminosarum bv. trifolii WSM1325 8007474 YP_002972981.1 CDS Rleg_4791 NC_012848.1 161903 162229 R KEGG: ret:RHE_PF00421 putative amicyanin protein; putative amicyanin protein complement(161903..162229) Rhizobium leguminosarum bv. trifolii WSM1325 8007475 YP_002972982.1 CDS Rleg_4792 NC_012848.1 162239 162760 R KEGG: ret:RHE_PF00420 hypothetical protein; hypothetical protein complement(162239..162760) Rhizobium leguminosarum bv. trifolii WSM1325 8007476 YP_002972983.1 CDS Rleg_4793 NC_012848.1 162901 163248 R PFAM: protein of unknown function DUF488; KEGG: rec:RHECIAT_PC0000611 hypothetical protein; hypothetical protein complement(162901..163248) Rhizobium leguminosarum bv. trifolii WSM1325 8007477 YP_002972984.1 CDS Rleg_4794 NC_012848.1 163538 164386 D KEGG: rec:RHECIAT_PC0000608 hypothetical protein; hypothetical protein 163538..164386 Rhizobium leguminosarum bv. trifolii WSM1325 8007478 YP_002972985.1 CDS Rleg_4795 NC_012848.1 164510 165955 R PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000932 putative salicylaldehyde dehydrogenase protein; aldehyde dehydrogenase complement(164510..165955) Rhizobium leguminosarum bv. trifolii WSM1325 8007479 YP_002972986.1 CDS Rleg_4796 NC_012848.1 165979 166764 R catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin.; 3-alpha-hydroxysteroid dehydrogenase complement(165979..166764) Rhizobium leguminosarum bv. trifolii WSM1325 8007480 YP_002972987.1 CDS Rleg_4797 NC_012848.1 166805 167842 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000930 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(166805..167842) Rhizobium leguminosarum bv. trifolii WSM1325 8007481 YP_002972988.1 CDS Rleg_4798 NC_012848.1 167839 168753 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000929 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(167839..168753) Rhizobium leguminosarum bv. trifolii WSM1325 8007482 YP_002972989.1 CDS Rleg_4799 NC_012848.1 168750 169478 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000928 putative branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein complement(168750..169478) Rhizobium leguminosarum bv. trifolii WSM1325 8007483 YP_002972990.1 CDS Rleg_4800 NC_012848.1 169475 170230 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000927 putative branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein complement(169475..170230) Rhizobium leguminosarum bv. trifolii WSM1325 8007484 YP_002972991.1 CDS Rleg_4801 NC_012848.1 170237 171556 R KEGG: rec:RHECIAT_PC0000926 putative branched-chain amino acid ABC transporter, substrate-binding protein; putative branched-chain amino acid ABC transporter substrate-binding protein complement(170237..171556) Rhizobium leguminosarum bv. trifolii WSM1325 8007485 YP_002972992.1 CDS Rleg_4802 NC_012848.1 171623 173119 R PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000925 putative short-chain dehydrogenase protein; aldehyde dehydrogenase complement(171623..173119) Rhizobium leguminosarum bv. trifolii WSM1325 8007486 YP_002972993.1 CDS Rleg_4803 NC_012848.1 173336 174235 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_PC0000924 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator 173336..174235 Rhizobium leguminosarum bv. trifolii WSM1325 8007487 YP_002972994.1 CDS Rleg_4804 NC_012848.1 174477 175817 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: two component sensor kinase; histidine kinase complement(174477..175817) Rhizobium leguminosarum bv. trifolii WSM1325 8007488 YP_002972995.1 CDS Rleg_4805 NC_012848.1 175814 176479 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: two component response regulator; winged helix family two component transcriptional regulator complement(175814..176479) Rhizobium leguminosarum bv. trifolii WSM1325 8007489 YP_002972996.1 CDS Rleg_4806 NC_012848.1 176484 177089 R KEGG: hypothetical protein LOC100019413; hypothetical protein complement(176484..177089) Rhizobium leguminosarum bv. trifolii WSM1325 8007490 YP_002972997.1 CDS Rleg_4807 NC_012848.1 177099 177674 R KEGG: hypothetical protein LOC687617; hypothetical protein complement(177099..177674) Rhizobium leguminosarum bv. trifolii WSM1325 8007491 YP_002972998.1 CDS Rleg_4808 NC_012848.1 177997 179403 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rec:RHECIAT_CH0002087 adenylate/guanylate cyclase protein; adenylate/guanylate cyclase complement(177997..179403) Rhizobium leguminosarum bv. trifolii WSM1325 8007492 YP_002972999.1 CDS Rleg_4809 NC_012848.1 179528 180013 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_PC0000923 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator complement(179528..180013) Rhizobium leguminosarum bv. trifolii WSM1325 8007493 YP_002973000.1 CDS Rleg_4810 NC_012848.1 180213 181799 D PFAM: AMP-dependent synthetase and ligase; KEGG: rec:RHECIAT_PC0000922 feruloyl-CoA synthetase protein; AMP-dependent synthetase and ligase 180213..181799 Rhizobium leguminosarum bv. trifolii WSM1325 8007494 YP_002973001.1 CDS Rleg_4811 NC_012848.1 181842 182666 D catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase 181842..182666 Rhizobium leguminosarum bv. trifolii WSM1325 8007495 YP_002973002.1 CDS Rleg_4812 NC_012848.1 182705 183811 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_PC0000920 putative aryl-alcohol dehydrogenase protein; alcohol dehydrogenase zinc-binding domain-containing protein 182705..183811 Rhizobium leguminosarum bv. trifolii WSM1325 8007496 YP_002973003.1 CDS Rleg_4813 NC_012848.1 183833 185272 D PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000919 coniferyl-aldehyde dehydrogenase protein; aldehyde dehydrogenase 183833..185272 Rhizobium leguminosarum bv. trifolii WSM1325 8007497 YP_002973004.1 CDS Rleg_4814 NC_012848.1 185726 187612 D KEGG: ret:RHE_PF00417 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type transmembrane region; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 185726..187612 Rhizobium leguminosarum bv. trifolii WSM1325 8007498 YP_002973005.1 CDS Rleg_4815 NC_012848.1 187695 189989 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ret:RHE_PF00416 formate dehydrogenase alpha chain protein; oxidoreductase alpha (molybdopterin) subunit 187695..189989 Rhizobium leguminosarum bv. trifolii WSM1325 8007630 YP_002973006.1 CDS Rleg_4816 NC_012848.1 189986 190270 D KEGG: ret:RHE_PF00415 hypothetical protein; hypothetical protein 189986..190270 Rhizobium leguminosarum bv. trifolii WSM1325 8007204 YP_002973007.1 CDS Rleg_4817 NC_012848.1 190295 191296 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_PC0000597 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator complement(190295..191296) Rhizobium leguminosarum bv. trifolii WSM1325 8007205 YP_002973008.1 CDS Rleg_4818 NC_012848.1 192294 193298 R PFAM: Malate/L-lactate dehydrogenase; KEGG: rec:RHECIAT_PC0000640 putative malate dehydrogenase protein; Malate/L-lactate dehydrogenase complement(192294..193298) Rhizobium leguminosarum bv. trifolii WSM1325 8007206 YP_002973009.1 CDS Rleg_4819 NC_012848.1 193298 195283 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sil:SPO0164 oxidoreductase, FMN-binding/pyridine nucleotide-disulfide oxidoreductase; NADH:flavin oxidoreductase/NADH oxidase complement(193298..195283) Rhizobium leguminosarum bv. trifolii WSM1325 8007207 YP_002973010.1 CDS Rleg_4820 NC_012848.1 195388 196467 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000594 probable glycine betaine/L-proline ABC transporter, ATP-binding protein; ABC transporter-like protein complement(195388..196467) Rhizobium leguminosarum bv. trifolii WSM1325 8007208 YP_002973011.1 CDS Rleg_4821 NC_012848.1 196460 197347 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000593 probable glycine betaine/L-proline ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(196460..197347) Rhizobium leguminosarum bv. trifolii WSM1325 8007209 YP_002973012.1 CDS Rleg_4822 NC_012848.1 197443 198444 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ret:RHE_PF00410 amino acid ABC transporter substrate-binding protein; glycine betaine ABC transporter substrate-binding protein complement(197443..198444) Rhizobium leguminosarum bv. trifolii WSM1325 8007210 YP_002973013.1 CDS Rleg_4823 NC_012848.1 198512 199306 R PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ret:RHE_PF00409 putative pyrroline-5-carboxylate reductase protein; Pyrroline-5-carboxylate reductase complement(198512..199306) Rhizobium leguminosarum bv. trifolii WSM1325 8007211 YP_002973014.1 CDS Rleg_4824 NC_012848.1 199318 199947 R PFAM: regulatory protein TetR; KEGG: ret:RHE_PF00408 TetR family transcriptional regulator; TetR family transcriptional regulator complement(199318..199947) Rhizobium leguminosarum bv. trifolii WSM1325 8007212 YP_002973015.1 CDS Rleg_4825 NC_012848.1 200094 202130 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rec:RHECIAT_PC0000589 2,4-dienoyl-CoA reductase (NADPH) protein; NADH:flavin oxidoreductase/NADH oxidase 200094..202130 Rhizobium leguminosarum bv. trifolii WSM1325 8007213 YP_002973016.1 CDS Rleg_4826 NC_012848.1 202179 202784 D KEGG: ret:RHE_PF00406 putative transcriptional regulator protein; putative transcriptional regulator protein 202179..202784 Rhizobium leguminosarum bv. trifolii WSM1325 8007214 YP_002973017.1 CDS Rleg_4827 NC_012848.1 202804 203553 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rec:RHECIAT_CH0004062 electron transport flavoprotein, beta subunit; electron transfer flavoprotein subunit alpha/beta 202804..203553 Rhizobium leguminosarum bv. trifolii WSM1325 8007215 YP_002973018.1 CDS Rleg_4828 NC_012848.1 203579 204508 D PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: electron transfer flavoprotein alpha-subunit alpha-etf flavoprotein ; K03522 electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha 203579..204508 Rhizobium leguminosarum bv. trifolii WSM1325 8007216 YP_002973019.1 CDS Rleg_4829 NC_012848.1 204524 205219 D KEGG: ret:RHE_PF00403 hypothetical protein; hypothetical protein 204524..205219 Rhizobium leguminosarum bv. trifolii WSM1325 8007217 YP_002973020.1 CDS Rleg_4830 NC_012848.1 205371 206498 D TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: atc:AGR_C_3072 alcohol dehydrogenase / formaldehyde dehydrogenase (glutathione); S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 205371..206498 Rhizobium leguminosarum bv. trifolii WSM1325 8007218 YP_002973021.1 CDS Rleg_4831 NC_012848.1 206502 207338 D KEGG: ret:RHE_PF00401 S-formylglutathione hydrolase protein; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 206502..207338 Rhizobium leguminosarum bv. trifolii WSM1325 8007219 YP_002973022.1 CDS Rleg_4832 NC_012848.1 207393 207965 D catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 207393..207965 Rhizobium leguminosarum bv. trifolii WSM1325 8007220 YP_002973023.1 CDS Rleg_4833 NC_012848.1 208420 209136 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_PC0000580 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator 208420..209136 Rhizobium leguminosarum bv. trifolii WSM1325 8007221 YP_002973024.1 CDS Rleg_4834 NC_012848.1 209133 210044 D PFAM: dihydrodipicolinate synthetase; KEGG: rec:RHECIAT_PC0000579 dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase 209133..210044 Rhizobium leguminosarum bv. trifolii WSM1325 8007222 YP_002973025.1 CDS Rleg_4835 NC_012848.1 210037 211554 D PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000578 aldehyde dehydrogenase protein; Betaine-aldehyde dehydrogenase 210037..211554 Rhizobium leguminosarum bv. trifolii WSM1325 8007223 YP_002973026.1 CDS Rleg_4836 NC_012848.1 211551 212897 D PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_PC0000577 putative oxidoreductase protein; FAD dependent oxidoreductase 211551..212897 Rhizobium leguminosarum bv. trifolii WSM1325 8007224 YP_002973027.1 CDS Rleg_4837 NC_012848.1 212975 213826 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ret:RHE_PF00395 glycine betaine/L-proline ABC transporter, substrate-binding protein; glycine betaine ABC transporter substrate-binding protein 212975..213826 Rhizobium leguminosarum bv. trifolii WSM1325 8007225 YP_002973028.1 CDS Rleg_4838 NC_012848.1 213912 215018 D KEGG: rec:RHECIAT_PC0000575 probable glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase subunit 213912..215018 Rhizobium leguminosarum bv. trifolii WSM1325 8007226 YP_002973029.1 CDS Rleg_4839 NC_012848.1 215024 215872 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000574 probable glycine betaine/L-proline ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 215024..215872 Rhizobium leguminosarum bv. trifolii WSM1325 8007227 YP_002973030.1 CDS Rleg_4840 NC_012848.1 215869 216720 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00392 glycine betaine/L-proline ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 215869..216720 Rhizobium leguminosarum bv. trifolii WSM1325 8007228 YP_002973031.1 CDS Rleg_4841 NC_012848.1 216737 217735 D PFAM: proline racemase; KEGG: rec:RHECIAT_PC0000572 putative proline racemase protein; hydroxyproline-2-epimerase 216737..217735 Rhizobium leguminosarum bv. trifolii WSM1325 8007229 YP_002973032.1 CDS Rleg_4842 NC_012848.1 217791 218804 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_PF00390 AraC family transcriptional regulator; AraC family transcriptional regulator 217791..218804 Rhizobium leguminosarum bv. trifolii WSM1325 8007230 YP_002973033.1 CDS Rleg_4843 NC_012848.1 218921 220201 R PFAM: peptidase M24; creatinase; KEGG: rec:RHECIAT_PC0000570 putative proline dipeptidase protein; peptidase M24 complement(218921..220201) Rhizobium leguminosarum bv. trifolii WSM1325 8007231 YP_002973034.1 CDS Rleg_4844 NC_012848.1 220248 221318 R PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: ret:RHE_PF00389 putative ferredoxin oxidoreductase protein; Oxidoreductase FAD-binding domain-containing protein complement(220248..221318) Rhizobium leguminosarum bv. trifolii WSM1325 8007232 YP_002973035.1 CDS Rleg_4845 NC_012848.1 221329 222582 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: rec:RHECIAT_PC0000568 putative Rieske [2Fe-2S] dioxygenase protein; Rieske (2Fe-2S) domain-containing protein complement(221329..222582) Rhizobium leguminosarum bv. trifolii WSM1325 8007233 YP_002973036.1 CDS Rleg_4846 NC_012848.1 222694 223581 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_PC0000567 putative transcriptional regulator protein, LysR family; LysR family transcriptional regulator 222694..223581 Rhizobium leguminosarum bv. trifolii WSM1325 8007234 YP_002973037.1 CDS Rleg_4847 NC_012848.1 223593 225245 R PFAM: transferase hexapeptide repeat containing protein; KEGG: ret:RHE_PF00386 hypothetical protein; transferase hexapeptide repeat containing protein complement(223593..225245) Rhizobium leguminosarum bv. trifolii WSM1325 8007235 YP_002973038.1 CDS Rleg_4848 NC_012848.1 225527 227524 R KEGG: rec:RHECIAT_PC0000125 putative sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(225527..227524) Rhizobium leguminosarum bv. trifolii WSM1325 8007236 YP_002973039.1 CDS Rleg_4849 NC_012848.1 227705 228742 D KEGG: rec:RHECIAT_PC0000126 hypothetical protein; hypothetical protein 227705..228742 Rhizobium leguminosarum bv. trifolii WSM1325 8007237 YP_002973040.1 CDS Rleg_4850 NC_012848.1 228866 229723 R PFAM: NmrA family protein; KEGG: ret:RHE_PE00142 hypothetical protein; NmrA family protein complement(228866..229723) Rhizobium leguminosarum bv. trifolii WSM1325 8007238 YP_002973041.1 CDS Rleg_4851 NC_012848.1 229853 230749 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PE00143 LysR family transcriptional regulator; LysR family transcriptional regulator 229853..230749 Rhizobium leguminosarum bv. trifolii WSM1325 8007239 YP_002973042.1 CDS Rleg_4852 NC_012848.1 230880 231350 R KEGG: sme:SMa5009 hypothetical protein; hypothetical protein complement(230880..231350) Rhizobium leguminosarum bv. trifolii WSM1325 8007240 YP_002973043.1 CDS Rleg_4853 NC_012848.1 231364 232110 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: zmo:ZMO1576 short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR complement(231364..232110) Rhizobium leguminosarum bv. trifolii WSM1325 8007241 YP_002973044.1 CDS Rleg_4854 NC_012848.1 232142 233329 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0002789 putative transporter protein, MFS family; major facilitator superfamily protein complement(232142..233329) Rhizobium leguminosarum bv. trifolii WSM1325 8007242 YP_002973045.1 CDS Rleg_4855 NC_012848.1 233423 234319 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_2350 transcriptional regulator, LysR family; LysR family transcriptional regulator 233423..234319 Rhizobium leguminosarum bv. trifolii WSM1325 8007243 YP_002973046.1 CDS Rleg_4856 NC_012848.1 234438 234932 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_PC0000565 proline dehydrogenase transcriptional activator protein; AsnC family transcriptional regulator complement(234438..234932) Rhizobium leguminosarum bv. trifolii WSM1325 8007244 YP_002973047.1 CDS Rleg_4857 NC_012848.1 235083 235289 D KEGG: rec:RHECIAT_PC0000564 hypothetical protein; hypothetical protein 235083..235289 Rhizobium leguminosarum bv. trifolii WSM1325 8007245 YP_002973048.1 CDS Rleg_4858 NC_012848.1 235317 239024 D proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 235317..239024 Rhizobium leguminosarum bv. trifolii WSM1325 8007246 YP_002973049.1 CDS Rleg_4859 NC_012848.1 239182 240381 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mlo:mll2320 hypothetical protein; Mandelate racemase/muconate lactonizing protein complement(239182..240381) Rhizobium leguminosarum bv. trifolii WSM1325 8007247 YP_002973050.1 CDS Rleg_4860 NC_012848.1 240399 241760 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PE00103 putative mandelate racemase/muconate lactonizing enzyme protein; Mandelate racemase/muconate lactonizing protein complement(240399..241760) Rhizobium leguminosarum bv. trifolii WSM1325 8007248 YP_002973051.1 CDS Rleg_4861 NC_012848.1 241837 243003 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PE00102 hypothetical protein; Mandelate racemase/muconate lactonizing protein complement(241837..243003) Rhizobium leguminosarum bv. trifolii WSM1325 8007249 YP_002973052.1 CDS Rleg_4862 NC_012848.1 243057 243767 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PE00101 GntR family transcriptional regulator; GntR family transcriptional regulator complement(243057..243767) Rhizobium leguminosarum bv. trifolii WSM1325 8007250 YP_002973053.1 CDS Rleg_4863 NC_012848.1 243972 245450 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PE00100 sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein 243972..245450 Rhizobium leguminosarum bv. trifolii WSM1325 8007251 YP_002973054.1 CDS Rleg_4864 NC_012848.1 245524 246483 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr2327 permease protein of sugar ABC transporter; binding-protein-dependent transport systems inner membrane component 245524..246483 Rhizobium leguminosarum bv. trifolii WSM1325 8007252 YP_002973055.1 CDS Rleg_4865 NC_012848.1 246480 247370 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr2328 permease protein of sugar ABC transporter; binding-protein-dependent transport systems inner membrane component 246480..247370 Rhizobium leguminosarum bv. trifolii WSM1325 8007253 YP_002973056.1 CDS Rleg_4866 NC_012848.1 247382 248479 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00097 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein 247382..248479 Rhizobium leguminosarum bv. trifolii WSM1325 8007254 YP_002973057.1 CDS Rleg_4867 NC_012848.1 248513 249676 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PE00096 putative galactonate dehydratase protein; Mandelate racemase/muconate lactonizing protein 248513..249676 Rhizobium leguminosarum bv. trifolii WSM1325 8007255 YP_002973058.1 CDS Rleg_4868 NC_012848.1 249696 250439 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: ret:RHE_PE00095 hypothetical protein; hypothetical protein 249696..250439 Rhizobium leguminosarum bv. trifolii WSM1325 8007256 YP_002973059.1 CDS Rleg_4870 NC_012848.1 250842 251852 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_PC0000033 sucrose operon repressor, transcriptional regulator protein, LacI family; LacI family transcriptional regulator 250842..251852 Rhizobium leguminosarum bv. trifolii WSM1325 8007377 YP_002973060.1 CDS Rleg_4871 NC_012848.1 251888 253192 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PF00047 sucrose ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein 251888..253192 Rhizobium leguminosarum bv. trifolii WSM1325 8007258 YP_002973061.1 CDS Rleg_4872 NC_012848.1 253266 254198 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00048 sucrose ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 253266..254198 Rhizobium leguminosarum bv. trifolii WSM1325 8007259 YP_002973062.1 CDS Rleg_4873 NC_012848.1 254191 255084 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00049 sucrose ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 254191..255084 Rhizobium leguminosarum bv. trifolii WSM1325 8007260 YP_002973063.1 CDS Rleg_4874 NC_012848.1 255087 256787 D PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: rec:RHECIAT_PC0000037 beta-fructofuranosidase protein; Glycosyl hydrolase family 32 domain-containing protein 255087..256787 Rhizobium leguminosarum bv. trifolii WSM1325 8007261 YP_002973064.1 CDS Rleg_4875 NC_012848.1 256921 257307 D PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PD00122 hypothetical protein; transposase IS3/IS911 family protein 256921..257307 Rhizobium leguminosarum bv. trifolii WSM1325 8007262 YP_002973065.1 CDS Rleg_4876 NC_012848.1 257304 257627 D PFAM: IS66 Orf2 family protein; KEGG: transposase; IS66 Orf2 family protein 257304..257627 Rhizobium leguminosarum bv. trifolii WSM1325 8007263 YP_002973066.1 CDS Rleg_4877 NC_012848.1 257620 259209 D PFAM: transposase IS66; KEGG: transposase; transposase IS66 257620..259209 Rhizobium leguminosarum bv. trifolii WSM1325 8007264 YP_002973067.1 CDS Rleg_4878 NC_012848.1 259248 259610 R KEGG: bur:Bcep18194_A4938 hypothetical protein; hypothetical protein complement(259248..259610) Rhizobium leguminosarum bv. trifolii WSM1325 8007265 YP_002973068.1 CDS Rleg_4880 NC_012848.1 260314 262455 R PFAM: helicase domain protein; SMART: helicase domain protein; KEGG: kpe:KPK_1760 putative helicase; helicase domain-containing protein complement(260314..262455) Rhizobium leguminosarum bv. trifolii WSM1325 8007378 YP_002973069.1 CDS Rleg_4881 NC_012848.1 262458 264083 R KEGG: kpe:KPK_1759 hypothetical protein; hypothetical protein complement(262458..264083) Rhizobium leguminosarum bv. trifolii WSM1325 8007267 YP_002973070.1 CDS Rleg_4882 NC_012848.1 264545 265168 R PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: pde:Pden_3350 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein complement(264545..265168) Rhizobium leguminosarum bv. trifolii WSM1325 8007268 YP_002973071.1 CDS Rleg_4886 NC_012848.1 268316 268603 R hypothetical protein complement(268316..268603) Rhizobium leguminosarum bv. trifolii WSM1325 8007381 YP_002973072.1 CDS Rleg_4887 NC_012848.1 269579 270406 D KEGG: rec:RHECIAT_PB0000023 hypothetical protein; hypothetical protein 269579..270406 Rhizobium leguminosarum bv. trifolii WSM1325 8007270 YP_002973073.1 CDS Rleg_4888 NC_012848.1 270403 271170 D PFAM: Domain of unknown function DUF1814; KEGG: rpe:RPE_3256 hypothetical protein; hypothetical protein 270403..271170 Rhizobium leguminosarum bv. trifolii WSM1325 8007271 YP_002973074.1 CDS Rleg_4889 NC_012848.1 271547 272248 R KEGG: atc:AGR_pTi_287 hypothetical protein; hypothetical protein complement(271547..272248) Rhizobium leguminosarum bv. trifolii WSM1325 8007272 YP_002973075.1 CDS Rleg_4891 NC_012848.1 273858 274787 R PFAM: Integrase catalytic region; KEGG: atc:AGR_L_547 hypothetical protein; Integrase catalytic region complement(273858..274787) Rhizobium leguminosarum bv. trifolii WSM1325 8007382 YP_002973076.1 CDS Rleg_4892 NC_012848.1 274781 275047 R PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PD00313 insertion sequence transposase protein; transposase IS3/IS911 family protein complement(274781..275047) Rhizobium leguminosarum bv. trifolii WSM1325 8007274 YP_002973077.1 CDS Rleg_4893 NC_012848.1 275591 276520 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rec:RHECIAT_CH0004273 rhizopine ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 275591..276520 Rhizobium leguminosarum bv. trifolii WSM1325 8007275 YP_002973078.1 CDS Rleg_4895 NC_012848.1 276942 277097 R KEGG: vsa:VSAL_I0028 hypothetical protein; hypothetical protein complement(276942..277097) Rhizobium leguminosarum bv. trifolii WSM1325 8007383 YP_002973079.1 CDS Rleg_4896 NC_012848.1 277727 277984 D SMART: helix-turn-helix domain protein; KEGG: smd:Smed_6375 transcriptional regulator, XRE family; XRE family transcriptional regulator 277727..277984 Rhizobium leguminosarum bv. trifolii WSM1325 8007277 YP_002973080.1 CDS Rleg_4897 NC_012848.1 278256 278474 R hypothetical protein complement(278256..278474) Rhizobium leguminosarum bv. trifolii WSM1325 8007278 YP_002973081.1 CDS Rleg_4899 NC_012848.1 279476 280138 D KEGG: ret:RHE_PD00012 hypothetical protein; hypothetical protein 279476..280138 Rhizobium leguminosarum bv. trifolii WSM1325 8007384 YP_002973082.1 CDS Rleg_4900 NC_012848.1 280267 280824 D KEGG: rec:RHECIAT_PB0000304 hypothetical protein; hypothetical protein 280267..280824 Rhizobium leguminosarum bv. trifolii WSM1325 8007280 YP_002973083.1 CDS Rleg_4902 NC_012848.1 281173 281466 R TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mlo:mlr5930 ferredoxin 2[4Fe-4S] III, FdxB; ferredoxin III, nif-specific complement(281173..281466) Rhizobium leguminosarum bv. trifolii WSM1325 8007385 YP_002973084.1 CDS Rleg_4903 NC_012848.1 281995 283584 R PFAM: transposase IS66; KEGG: smd:Smed_6340 transposase IS66; transposase IS66 complement(281995..283584) Rhizobium leguminosarum bv. trifolii WSM1325 8007629 YP_002973085.1 CDS Rleg_4905 NC_012848.1 283792 285447 R PFAM: transposase IS66; KEGG: xau:Xaut_5015 transposase IS66; transposase IS66 complement(283792..285447) Rhizobium leguminosarum bv. trifolii WSM1325 8007386 YP_002973086.1 CDS Rleg_4906 NC_012848.1 285493 285840 R PFAM: IS66 Orf2 family protein; KEGG: ret:RHE_CH00774 insertion sequence transposase protein; IS66 Orf2 family protein complement(285493..285840) Rhizobium leguminosarum bv. trifolii WSM1325 8007502 YP_002973087.1 CDS Rleg_4907 NC_012848.1 285837 286247 R PFAM: transposase IS3/IS911 family protein; KEGG: xau:Xaut_4842 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(285837..286247) Rhizobium leguminosarum bv. trifolii WSM1325 8007503 YP_002973088.1 CDS Rleg_4908 NC_012848.1 287288 288391 R PFAM: acyltransferase 3; KEGG: bbt:BBta_p0211 hypothetical protein; acyltransferase 3 complement(287288..288391) Rhizobium leguminosarum bv. trifolii WSM1325 8007504 YP_002973089.1 CDS Rleg_4909 NC_012848.1 288676 289167 R PFAM: MaoC domain protein dehydratase; KEGG: sme:SMa0874 NodN dehydratase; Enoyl-CoA hydratase complement(288676..289167) Rhizobium leguminosarum bv. trifolii WSM1325 8007505 YP_002973090.1 CDS Rleg_4910 NC_012848.1 289247 291073 R TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: sme:SMc00231 D-fructose-6-phosphate amidotransferase; glucosamine/fructose-6-phosphate aminotransferase complement(289247..291073) Rhizobium leguminosarum bv. trifolii WSM1325 8007506 YP_002973091.1 CDS Rleg_4911 NC_012848.1 291504 292055 R KEGG: smd:Smed_6263 maltose O-acetyltransferase; maltose O-acetyltransferase complement(291504..292055) Rhizobium leguminosarum bv. trifolii WSM1325 8007507 YP_002973092.1 CDS Rleg_4912 NC_012848.1 292194 292454 R hypothetical protein complement(292194..292454) Rhizobium leguminosarum bv. trifolii WSM1325 8007508 YP_002973093.1 CDS Rleg_4913 NC_012848.1 292544 293752 R PFAM: Beta-ketoacyl synthase; KEGG: smd:Smed_6194 beta-ketoacyl synthase; Beta-ketoacyl synthase complement(292544..293752) Rhizobium leguminosarum bv. trifolii WSM1325 8007509 YP_002973094.1 CDS Rleg_4914 NC_012848.1 293752 294030 R PFAM: phosphopantetheine-binding; KEGG: sme:SMa0852 NodF acyl carrier protein; phosphopantetheine-binding complement(293752..294030) Rhizobium leguminosarum bv. trifolii WSM1325 8007510 YP_002973095.1 CDS Rleg_4915 NC_012848.1 294503 295450 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_6183 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(294503..295450) Rhizobium leguminosarum bv. trifolii WSM1325 8007511 YP_002973096.1 CDS Rleg_4916 NC_012848.1 295685 296275 D catalyzes the transfer of a fatty acyl group onto Nod factor, beta-(1,4)-N-acetylglucosamine oligosaccharide; acyltransferase NodA 295685..296275 Rhizobium leguminosarum bv. trifolii WSM1325 8007512 YP_002973097.1 CDS Rleg_4917 NC_012848.1 296272 296910 D PFAM: polysaccharide deacetylase; KEGG: sme:SMa0868 NodB chitooligosaccharide deacetylase; polysaccharide deacetylase 296272..296910 Rhizobium leguminosarum bv. trifolii WSM1325 8007513 YP_002973098.1 CDS Rleg_4918 NC_012848.1 296931 298211 D PFAM: glycosyl transferase family 2; chitin synthase; KEGG: smd:Smed_6186 glycosyl transferase family 2; glycosyl transferase family 2 296931..298211 Rhizobium leguminosarum bv. trifolii WSM1325 8007514 YP_002973099.1 CDS Rleg_4919 NC_012848.1 298242 299270 D ATP-binding subunit; with NodJ is involved in the export of lipo-chitin oligosaccharide; involved in nodulation induction; nodulation factor exporter subunit NodI 298242..299270 Rhizobium leguminosarum bv. trifolii WSM1325 8007515 YP_002973100.1 CDS Rleg_4920 NC_012848.1 299267 300055 D TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: smd:Smed_6188 ABC-2 type transporter, NodJ family; NodJ family ABC-2 type transporter 299267..300055 Rhizobium leguminosarum bv. trifolii WSM1325 8007516 YP_002973101.1 CDS Rleg_4922 NC_012848.1 300689 300901 R TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: mlo:msl5852 hypothetical protein; nitrogen fixation protein FixT complement(300689..300901) Rhizobium leguminosarum bv. trifolii WSM1325 8007387 YP_002973102.1 CDS Rleg_4923 NC_012848.1 301086 301280 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bbt:BBta_5932 ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein complement(301086..301280) Rhizobium leguminosarum bv. trifolii WSM1325 8007518 YP_002973103.1 CDS Rleg_4924 NC_012848.1 301314 302786 R TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: mlo:mll5855 nitrogen fixation protein NifB; nitrogenase cofactor biosynthesis protein NifB complement(301314..302786) Rhizobium leguminosarum bv. trifolii WSM1325 8007519 YP_002973104.1 CDS Rleg_4925 NC_012848.1 303029 304111 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mlo:mll5857 nif-specific regulatory protein,NifA; Fis family sigma-54 specific transcriptional regulator complement(303029..304111) Rhizobium leguminosarum bv. trifolii WSM1325 8007520 YP_002973105.1 CDS Rleg_4926 NC_012848.1 304306 304602 R KEGG: sme:SMa0816 FixX ferredoxin-like protein; FixX ferredoxin-like protein complement(304306..304602) Rhizobium leguminosarum bv. trifolii WSM1325 8007521 YP_002973106.1 CDS Rleg_4927 NC_012848.1 304615 305922 R PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll5860 nitrogen fixation protein,FixC; Electron-transferring-flavoprotein dehydrogenase complement(304615..305922) Rhizobium leguminosarum bv. trifolii WSM1325 8007522 YP_002973107.1 CDS Rleg_4928 NC_012848.1 305933 307045 R PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ret:RHE_PD00225 electron transfer flavoprotein alpha subunit protein; electron transfer flavoprotein subunit alpha complement(305933..307045) Rhizobium leguminosarum bv. trifolii WSM1325 8007523 YP_002973108.1 CDS Rleg_4929 NC_012848.1 307062 307910 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rec:RHECIAT_PB0000268 electron transfer flavoprotein, beta subunit; electron transfer flavoprotein subunit alpha/beta complement(307062..307910) Rhizobium leguminosarum bv. trifolii WSM1325 8007524 YP_002973109.1 CDS nifH NC_012848.1 308462 309349 D nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 308462..309349 Rhizobium leguminosarum bv. trifolii WSM1325 8007525 YP_002973110.1 CDS Rleg_4931 NC_012848.1 309442 310953 D TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; KEGG: ret:RHE_PD00201 nitrogenase, iron-molybdenum alpha chain protein; nitrogenase molybdenum-iron protein alpha chain 309442..310953 Rhizobium leguminosarum bv. trifolii WSM1325 8007526 YP_002973111.1 CDS Rleg_4932 NC_012848.1 311031 312563 D KEGG: ret:RHE_PD00306 nitrogenase, iron-molybdenum beta chain protein; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein beta chain 311031..312563 Rhizobium leguminosarum bv. trifolii WSM1325 8007527 YP_002973112.1 CDS Rleg_4933 NC_012848.1 312617 314059 D TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mlo:mlr5908 nitrogenase molybdenum-cofactor synthesis protein NifE; nitrogenase MoFe cofactor biosynthesis protein NifE 312617..314059 Rhizobium leguminosarum bv. trifolii WSM1325 8007528 YP_002973113.1 CDS Rleg_4934 NC_012848.1 314065 315396 D KEGG: mlo:mlr5909 nitrogenase molybdenum-iron protein beta chain, NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 314065..315396 Rhizobium leguminosarum bv. trifolii WSM1325 8007529 YP_002973114.1 CDS Rleg_4935 NC_012848.1 315559 315654 R hypothetical protein complement(315559..315654) Rhizobium leguminosarum bv. trifolii WSM1325 8007530 YP_002973115.1 CDS Rleg_4937 NC_012848.1 315785 316006 R hypothetical protein complement(315785..316006) Rhizobium leguminosarum bv. trifolii WSM1325 8007388 YP_002973116.1 CDS Rleg_4939 NC_012848.1 316886 318145 R PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon; ROK family protein complement(316886..318145) Rhizobium leguminosarum bv. trifolii WSM1325 8007389 YP_002973117.1 CDS Rleg_4940 NC_012848.1 318427 319881 D PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter; family 1 extracellular solute-binding protein 318427..319881 Rhizobium leguminosarum bv. trifolii WSM1325 8007533 YP_002973118.1 CDS Rleg_4941 NC_012848.1 319952 320881 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypm:YP_1499 putative binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transport systems inner membrane component 319952..320881 Rhizobium leguminosarum bv. trifolii WSM1325 8007534 YP_002973119.1 CDS Rleg_4942 NC_012848.1 320883 321716 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3638 sugar ABC transporter, permease protein, putative; binding-protein-dependent transport systems inner membrane component 320883..321716 Rhizobium leguminosarum bv. trifolii WSM1325 8007535 YP_002973120.1 CDS Rleg_4943 NC_012848.1 321744 322769 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: stm:STM2753 putative dehydrogenase; oxidoreductase domain-containing protein 321744..322769 Rhizobium leguminosarum bv. trifolii WSM1325 8007536 YP_002973121.1 CDS Rleg_4944 NC_012848.1 322849 324015 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xcv:XCV2238 sugar ABC transporter ATP-binding protein; ABC transporter-like protein 322849..324015 Rhizobium leguminosarum bv. trifolii WSM1325 8007537 YP_002973122.1 CDS Rleg_4945 NC_012848.1 324194 326101 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: mcpA; methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 324194..326101 Rhizobium leguminosarum bv. trifolii WSM1325 8007538 YP_002973123.1 CDS Rleg_4946 NC_012848.1 326162 327436 R PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon; ROK family protein complement(326162..327436) Rhizobium leguminosarum bv. trifolii WSM1325 8007539 YP_002973124.1 CDS Rleg_4947 NC_012848.1 327889 329175 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bxe:Bxe_B1456 putative DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 327889..329175 Rhizobium leguminosarum bv. trifolii WSM1325 8007540 YP_002973125.1 CDS Rleg_4948 NC_012848.1 329311 329982 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO0040 putative haloacid dehalogenase-like hydrolase; putative phosphatase; HAD-superfamily hydrolase 329311..329982 Rhizobium leguminosarum bv. trifolii WSM1325 8007541 YP_002973126.1 CDS Rleg_4949 NC_012848.1 330129 330617 D PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1014 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 330129..330617 Rhizobium leguminosarum bv. trifolii WSM1325 8007542 YP_002973127.1 CDS Rleg_4950 NC_012848.1 330895 331581 D KEGG: ypm:YP_1878 glycerophosphoryl diester phosphodiesterase; Glycerophosphoryl diester phosphodiesterase-like protein 330895..331581 Rhizobium leguminosarum bv. trifolii WSM1325 8007543 YP_002973128.1 CDS Rleg_4951 NC_012848.1 331626 332108 D hypothetical protein 331626..332108 Rhizobium leguminosarum bv. trifolii WSM1325 8007544 YP_002973129.1 CDS Rleg_4952 NC_012848.1 332142 333221 D hypothetical protein 332142..333221 Rhizobium leguminosarum bv. trifolii WSM1325 8007545 YP_002973130.1 CDS Rleg_4953 NC_012848.1 333587 335143 D PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: atu:Atu5094 ISL3 family transposase; transposase IS204/IS1001/IS1096/IS1165 family protein 333587..335143 Rhizobium leguminosarum bv. trifolii WSM1325 8007546 YP_002973131.1 CDS Rleg_4954 NC_012848.1 335279 335950 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ret:RHE_PF00499 CRP family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(335279..335950) Rhizobium leguminosarum bv. trifolii WSM1325 8007547 YP_002973132.1 CDS Rleg_4955 NC_012848.1 335985 336143 R TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: ret:RHE_PF00500 membrane protein precursor; cytochrome oxidase maturation protein, cbb3-type complement(335985..336143) Rhizobium leguminosarum bv. trifolii WSM1325 8007548 YP_002973133.1 CDS Rleg_4956 NC_012848.1 336140 338425 R TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_PF00501 cation transport ATPase protein; heavy metal translocating P-type ATPase complement(336140..338425) Rhizobium leguminosarum bv. trifolii WSM1325 8007549 YP_002973134.1 CDS Rleg_4957 NC_012848.1 338422 338907 R PFAM: FixH family protein; KEGG: rec:RHECIAT_PB0000326 cation pump membrane (nitrogen fixation) protein; FixH family protein complement(338422..338907) Rhizobium leguminosarum bv. trifolii WSM1325 8007550 YP_002973135.1 CDS Rleg_4958 NC_012848.1 338904 340472 R TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ret:RHE_PF00503 ferrodoxin oxidase protein; cytochrome c oxidase accessory protein CcoG complement(338904..340472) Rhizobium leguminosarum bv. trifolii WSM1325 8007551 YP_002973136.1 CDS Rleg_4959 NC_012848.1 340868 341731 R TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: ret:RHE_PF00504 cytochrome c oxidase, FixP chain (cbb3-type subunit III) protein; cytochrome c oxidase, cbb3-type, subunit III complement(340868..341731) Rhizobium leguminosarum bv. trifolii WSM1325 8007552 YP_002973137.1 CDS Rleg_4960 NC_012848.1 341733 341885 R PFAM: Cbb3-type cytochrome oxidase component; KEGG: ret:RHE_PF00505 cytochrome c oxidase, FixQ chain protein; Cbb3-type cytochrome oxidase component complement(341733..341885) Rhizobium leguminosarum bv. trifolii WSM1325 8007553 YP_002973138.1 CDS Rleg_4961 NC_012848.1 341894 342628 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(341894..342628) Rhizobium leguminosarum bv. trifolii WSM1325 8007554 YP_002973139.1 CDS Rleg_4962 NC_012848.1 342637 344259 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(342637..344259) Rhizobium leguminosarum bv. trifolii WSM1325 8007555 YP_002973140.1 CDS Rleg_4963 NC_012848.1 345038 345742 R PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mno:Mnod_8476 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(345038..345742) Rhizobium leguminosarum bv. trifolii WSM1325 8007556 YP_002973141.1 CDS Rleg_4964 NC_012848.1 345888 346043 R hypothetical protein complement(345888..346043) Rhizobium leguminosarum bv. trifolii WSM1325 8007557 YP_002973142.1 CDS Rleg_4967 NC_012848.1 348358 348666 D PFAM: Protein of unknown function DUF1778; KEGG: maq:Maqu_4288 hypothetical protein; hypothetical protein 348358..348666 Rhizobium leguminosarum bv. trifolii WSM1325 8007391 YP_002973143.1 CDS Rleg_4968 NC_012848.1 348666 349208 D KEGG: maq:Maqu_4287 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 348666..349208 Rhizobium leguminosarum bv. trifolii WSM1325 8007559 YP_002973144.1 CDS Rleg_4969 NC_012848.1 349568 349828 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hypothetical transcription regulator protein; XRE family transcriptional regulator complement(349568..349828) Rhizobium leguminosarum bv. trifolii WSM1325 8007560 YP_002973145.1 CDS Rleg_4970 NC_012848.1 349931 350821 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator 349931..350821 Rhizobium leguminosarum bv. trifolii WSM1325 8007561 YP_002973146.1 CDS Rleg_4971 NC_012848.1 351226 351561 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: xau:Xaut_2262 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein complement(351226..351561) Rhizobium leguminosarum bv. trifolii WSM1325 8007562 YP_002973147.1 CDS Rleg_4972 NC_012848.1 351659 352549 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator 351659..352549 Rhizobium leguminosarum bv. trifolii WSM1325 8007563 YP_002973148.1 CDS Rleg_4973 NC_012848.1 352819 353739 D PFAM: domain of unknown function DUF1738; KEGG: rec:RHECIAT_PB0000154 probable DNA conjugal transfer antirestriction protein; hypothetical protein 352819..353739 Rhizobium leguminosarum bv. trifolii WSM1325 8007564 YP_002973149.1 CDS Rleg_4974 NC_012848.1 353802 354047 R PFAM: WGR domain protein; SMART: WGR domain protein; KEGG: hypothetical protein; WGR domain-containing protein complement(353802..354047) Rhizobium leguminosarum bv. trifolii WSM1325 8007565 YP_002973150.1 CDS Rleg_4975 NC_012848.1 354139 355821 R PFAM: TRAG family protein; KEGG: traG; Ti-type conjugative transfer system protein TraG ; K03205 type IV secretion system protein VirD4; TRAG family protein complement(354139..355821) Rhizobium leguminosarum bv. trifolii WSM1325 8007566 YP_002973151.1 CDS Rleg_4976 NC_012848.1 355821 356144 R KEGG: mobilization protein C; hypothetical protein complement(355821..356144) Rhizobium leguminosarum bv. trifolii WSM1325 8007567 YP_002973152.1 CDS Rleg_4977 NC_012848.1 356424 359720 D TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: traA; Ti-type conjugative transfer relaxase TraA; Ti-type conjugative transfer relaxase TraA 356424..359720 Rhizobium leguminosarum bv. trifolii WSM1325 8007568 YP_002973153.1 CDS Rleg_4978 NC_012848.1 360193 362733 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_PC0000562 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 360193..362733 Rhizobium leguminosarum bv. trifolii WSM1325 8007569 YP_002973154.1 CDS Rleg_4979 NC_012848.1 362904 363755 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PF00383 putative epimerase protein; xylose isomerase domain-containing protein complement(362904..363755) Rhizobium leguminosarum bv. trifolii WSM1325 8007570 YP_002973155.1 CDS Rleg_4980 NC_012848.1 364098 364985 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PF00382 putative epimerase protein; xylose isomerase domain-containing protein 364098..364985 Rhizobium leguminosarum bv. trifolii WSM1325 8007571 YP_002973156.1 CDS Rleg_4981 NC_012848.1 365045 366214 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PF00381 putative mandelate racemase protein; Mandelate racemase/muconate lactonizing protein 365045..366214 Rhizobium leguminosarum bv. trifolii WSM1325 8007572 YP_002973157.1 CDS Rleg_4982 NC_012848.1 366217 366906 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PF00380 GntR family transcriptional regulator; GntR domain-containing protein 366217..366906 Rhizobium leguminosarum bv. trifolii WSM1325 8007573 YP_002973158.1 CDS Rleg_4983 NC_012848.1 366932 367906 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ret:RHE_PF00379 putative phosphoglycerate dehydrogenase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 366932..367906 Rhizobium leguminosarum bv. trifolii WSM1325 8007574 YP_002973159.1 CDS Rleg_4984 NC_012848.1 367986 369062 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00378 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein complement(367986..369062) Rhizobium leguminosarum bv. trifolii WSM1325 8007575 YP_002973160.1 CDS Rleg_4985 NC_012848.1 369062 370171 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00377 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein complement(369062..370171) Rhizobium leguminosarum bv. trifolii WSM1325 8007576 YP_002973161.1 CDS Rleg_4986 NC_012848.1 370168 370371 R KEGG: smd:Smed_5861 hypothetical protein; hypothetical protein complement(370168..370371) Rhizobium leguminosarum bv. trifolii WSM1325 8007577 YP_002973162.1 CDS Rleg_4987 NC_012848.1 370368 371327 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00376 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(370368..371327) Rhizobium leguminosarum bv. trifolii WSM1325 8007578 YP_002973163.1 CDS Rleg_4988 NC_012848.1 371329 372234 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00375 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(371329..372234) Rhizobium leguminosarum bv. trifolii WSM1325 8007579 YP_002973164.1 CDS Rleg_4989 NC_012848.1 372390 373700 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PF00374 putative sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein complement(372390..373700) Rhizobium leguminosarum bv. trifolii WSM1325 8007580 YP_002973165.1 CDS Rleg_4990 NC_012848.1 374070 374708 R PFAM: regulatory protein TetR; KEGG: ret:RHE_PF00373 TetR family transcriptional regulator; TetR family transcriptional regulator complement(374070..374708) Rhizobium leguminosarum bv. trifolii WSM1325 8007581 YP_002973166.1 CDS Rleg_4991 NC_012848.1 374808 376004 D PFAM: protein of unknown function UPF0261; KEGG: ret:RHE_PF00372 hypothetical protein; hypothetical protein 374808..376004 Rhizobium leguminosarum bv. trifolii WSM1325 8007582 YP_002973167.1 CDS Rleg_4992 NC_012848.1 376016 376858 D KEGG: sme:SMa1332 hypothetical protein; hypothetical protein 376016..376858 Rhizobium leguminosarum bv. trifolii WSM1325 8007583 YP_002973168.1 CDS Rleg_4993 NC_012848.1 376884 377297 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_PF00370 hypothetical protein; Cupin 2 conserved barrel domain-containing protein 376884..377297 Rhizobium leguminosarum bv. trifolii WSM1325 8007584 YP_002973169.1 CDS Rleg_4994 NC_012848.1 377330 378520 D PFAM: peptidase M24; creatinase; KEGG: ret:RHE_PF00369 proline M24 family dipeptidase; peptidase M24 377330..378520 Rhizobium leguminosarum bv. trifolii WSM1325 8007585 YP_002973170.1 CDS Rleg_4995 NC_012848.1 378592 379185 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ret:RHE_PF00368 hypothetical protein; intracellular protease, PfpI family complement(378592..379185) Rhizobium leguminosarum bv. trifolii WSM1325 8007586 YP_002973171.1 CDS Rleg_4996 NC_012848.1 379242 379940 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PF00367 GntR family transcriptional regulator; GntR family transcriptional regulator complement(379242..379940) Rhizobium leguminosarum bv. trifolii WSM1325 8007587 YP_002973172.1 CDS Rleg_4997 NC_012848.1 380037 381071 D PFAM: Malate/L-lactate dehydrogenase; KEGG: ret:RHE_PF00366 putative malate dehydrogenase protein; (R)-2-hydroxyacid dehydrogenase 380037..381071 Rhizobium leguminosarum bv. trifolii WSM1325 8007588 YP_002973173.1 CDS Rleg_4998 NC_012848.1 381068 382297 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ret:RHE_PF00365 putative alcohol dehydrogenase protein; iron-containing alcohol dehydrogenase 381068..382297 Rhizobium leguminosarum bv. trifolii WSM1325 8007589 YP_002973174.1 CDS Rleg_4999 NC_012848.1 382312 383799 D PFAM: Aldehyde Dehydrogenase; KEGG: ret:RHE_PF00364 succinate-semialdehyde dehydrogenase protein; succinate-semialdehyde dehydrogenase 382312..383799 Rhizobium leguminosarum bv. trifolii WSM1325 8007590 YP_002973175.1 CDS Rleg_5000 NC_012848.1 383811 384659 D KEGG: ret:RHE_PF00363 putative esterase/lipase/thiestherase protein; putative esterase/lipase/thiestherase protein 383811..384659 Rhizobium leguminosarum bv. trifolii WSM1325 8007591 YP_002973176.1 CDS Rleg_5001 NC_012848.1 384773 386098 R PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_PF00361 deaminase protein; FAD dependent oxidoreductase complement(384773..386098) Rhizobium leguminosarum bv. trifolii WSM1325 8007592 YP_002973177.1 CDS Rleg_5002 NC_012848.1 386332 386808 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_PC0000560 probable transcriptional regulator protein (leucine-responsive), AsnC family; AsnC family transcriptional regulator 386332..386808 Rhizobium leguminosarum bv. trifolii WSM1325 8007593 YP_002973178.1 CDS Rleg_5003 NC_012848.1 387141 388796 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000559 probable oligopeptide ABC transporter, ATP-binding protein; ABC transporter-like protein complement(387141..388796) Rhizobium leguminosarum bv. trifolii WSM1325 8007594 YP_002973179.1 CDS Rleg_5004 NC_012848.1 388793 389659 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000558 probable oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(388793..389659) Rhizobium leguminosarum bv. trifolii WSM1325 8007595 YP_002973180.1 CDS Rleg_5005 NC_012848.1 389656 390606 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000557 probable oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(389656..390606) Rhizobium leguminosarum bv. trifolii WSM1325 8007596 YP_002973181.1 CDS Rleg_5006 NC_012848.1 390696 392306 R PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PC0000556 probable oligopeptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein complement(390696..392306) Rhizobium leguminosarum bv. trifolii WSM1325 8007597 YP_002973182.1 CDS Rleg_5007 NC_012848.1 392370 393083 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); KEGG: rec:RHECIAT_PC0000555 putative 2-haloacid dehalogenase protein; HAD-superfamily hydrolase complement(392370..393083) Rhizobium leguminosarum bv. trifolii WSM1325 8007598 YP_002973183.1 CDS Rleg_5008 NC_012848.1 393300 394676 R PFAM: aminotransferase class-III; KEGG: ret:RHE_PF00349 hypothetical protein; hypothetical protein complement(393300..394676) Rhizobium leguminosarum bv. trifolii WSM1325 8007599 YP_002973184.1 CDS Rleg_5009 NC_012848.1 394690 395526 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_PC0000553 putative acetyltransferase protein; GCN5-like N-acetyltransferase complement(394690..395526) Rhizobium leguminosarum bv. trifolii WSM1325 8007600 YP_002973185.1 CDS Rleg_5010 NC_012848.1 395682 396962 R PFAM: type III effector Hrp-dependent outers; KEGG: rec:RHECIAT_PC0000552 hypothetical protein; Hrp-dependent type III effector protein complement(395682..396962) Rhizobium leguminosarum bv. trifolii WSM1325 8007601 YP_002973186.1 CDS Rleg_5011 NC_012848.1 396966 397742 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PF00346 putative hydroxypyruvate isomerase protein; Hydroxypyruvate isomerase complement(396966..397742) Rhizobium leguminosarum bv. trifolii WSM1325 8007602 YP_002973187.1 CDS Rleg_5012 NC_012848.1 397757 398701 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rec:RHECIAT_PC0000550 putative 3-hydroxyisobutyrate dehydrogenase protein; 3-hydroxyisobutyrate dehydrogenase complement(397757..398701) Rhizobium leguminosarum bv. trifolii WSM1325 8007603 YP_002973188.1 CDS Rleg_5013 NC_012848.1 398956 399954 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: transcriptional regulator protein ; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor; LacI family transcriptional regulator 398956..399954 Rhizobium leguminosarum bv. trifolii WSM1325 8007604 YP_002973189.1 CDS Rleg_5014 NC_012848.1 399971 400645 D PFAM: class II aldolase/adducin family protein; KEGG: rec:RHECIAT_PC0000547 putative aldolase protein; putative aldolase 399971..400645 Rhizobium leguminosarum bv. trifolii WSM1325 8007605 YP_002973190.1 CDS Rleg_5015 NC_012848.1 400817 401485 D TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMa1851 putative dehalogenase; haloacid dehalogenase, type II 400817..401485 Rhizobium leguminosarum bv. trifolii WSM1325 8007606 YP_002973191.1 CDS Rleg_5016 NC_012848.1 401499 402773 D PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_PF00341 FAD-dependent oxidoreductase protein; FAD dependent oxidoreductase 401499..402773 Rhizobium leguminosarum bv. trifolii WSM1325 8007607 YP_002973192.1 CDS Rleg_5017 NC_012848.1 402837 403142 R PFAM: protein of unknown function DUF982; KEGG: ret:RHE_CH01582 hypothetical protein; hypothetical protein complement(402837..403142) Rhizobium leguminosarum bv. trifolii WSM1325 8007608 YP_002973193.1 CDS Rleg_5018 NC_012848.1 403220 403468 R KEGG: rec:RHECIAT_PA0000245 hypothetical protein; hypothetical protein complement(403220..403468) Rhizobium leguminosarum bv. trifolii WSM1325 8007609 YP_002973194.1 CDS Rleg_5019 NC_012848.1 403478 404422 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: hpp:HPP12_p02 MccB; UBA/THIF-type NAD/FAD binding protein complement(403478..404422) Rhizobium leguminosarum bv. trifolii WSM1325 8007610 YP_002973195.1 CDS Rleg_5020 NC_012848.1 404422 405867 R hypothetical protein complement(404422..405867) Rhizobium leguminosarum bv. trifolii WSM1325 8007611 YP_002973196.1 CDS Rleg_5021 NC_012848.1 406110 407786 R KEGG: rsh:Rsph17029_2960 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(406110..407786) Rhizobium leguminosarum bv. trifolii WSM1325 8007612 YP_002973197.1 CDS Rleg_5022 NC_012848.1 407838 408866 R PFAM: phosphoesterase PA-phosphatase related; KEGG: rsp:RSP_1300 hypothetical protein; PA-phosphatase-like phosphoesterase complement(407838..408866) Rhizobium leguminosarum bv. trifolii WSM1325 8007613 YP_002973198.1 CDS Rleg_5023 NC_012848.1 408908 410779 R KEGG: rsh:Rsph17029_2958 SARP family transcriptional regulator; SARP family transcriptional regulator complement(408908..410779) Rhizobium leguminosarum bv. trifolii WSM1325 8007614 YP_002973199.1 CDS Rleg_5024 NC_012848.1 411094 412551 R KEGG: rec:RHECIAT_PC0000544 succinate-semialdehyde dehydrogenase (NAD(P)(+)) protein; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinic semialdehyde dehydrogenase complement(411094..412551) Rhizobium leguminosarum bv. trifolii WSM1325 8007615 YP_002973200.1 CDS Rleg_5025 NC_012848.1 412567 413610 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(412567..413610) Rhizobium leguminosarum bv. trifolii WSM1325 8007616 YP_002973201.1 CDS Rleg_5026 NC_012848.1 413620 415083 R PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000542 putative aldehyde dehydrogenase (NAD(+)) protein; Betaine-aldehyde dehydrogenase complement(413620..415083) Rhizobium leguminosarum bv. trifolii WSM1325 8007617 YP_002973202.1 CDS Rleg_5027 NC_012848.1 415213 415566 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: rec:RHECIAT_PC0000541 hypothetical protein; hypothetical protein complement(415213..415566) Rhizobium leguminosarum bv. trifolii WSM1325 8007618 YP_002973203.1 CDS Rleg_5028 NC_012848.1 415592 416515 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rec:RHECIAT_PC0000540 putative D-2-hydroxyacid dehydrogenase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(415592..416515) Rhizobium leguminosarum bv. trifolii WSM1325 8007619 YP_002973204.1 CDS Rleg_5029 NC_012848.1 416542 417663 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase complement(416542..417663) Rhizobium leguminosarum bv. trifolii WSM1325 8007620 YP_002973205.1 CDS Rleg_5030 NC_012848.1 417994 418896 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_PC0000538 putative acetyltransferase protein; GCN5-like N-acetyltransferase 417994..418896 Rhizobium leguminosarum bv. trifolii WSM1325 8007621 YP_002973206.1 CDS Rleg_5031 NC_012848.1 418942 419148 R KEGG: rec:RHECIAT_PC0000537 hypothetical protein; hypothetical protein complement(418942..419148) Rhizobium leguminosarum bv. trifolii WSM1325 8007622 YP_002973207.1 CDS Rleg_5032 NC_012848.1 419170 419859 R TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mlo:mll0364 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase complement(419170..419859) Rhizobium leguminosarum bv. trifolii WSM1325 8007623 YP_002973208.1 CDS Rleg_5033 NC_012848.1 420386 420643 R KEGG: ret:RHE_PF00333 hypothetical protein; hypothetical protein complement(420386..420643) Rhizobium leguminosarum bv. trifolii WSM1325 8007624 YP_002973209.1 CDS Rleg_5034 NC_012848.1 420957 421862 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_PC0000534 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 420957..421862 Rhizobium leguminosarum bv. trifolii WSM1325 8007625 YP_002973210.1 CDS Rleg_5035 NC_012848.1 422015 423049 D PFAM: HPP family protein; CBS domain containing protein; KEGG: ret:RHE_PF00331 hypothetical protein; CBS domain containing membrane protein 422015..423049 Rhizobium leguminosarum bv. trifolii WSM1325 8007626 YP_002973211.1 CDS Rleg_5036 NC_012848.1 423085 423363 D KEGG: sme:SMa1192 hypothetical protein; hypothetical protein 423085..423363 Rhizobium leguminosarum bv. trifolii WSM1325 8007627 YP_002973212.1 CDS Rleg_5037 NC_012848.1 423416 423652 R KEGG: rec:RHECIAT_PC0000531 hypothetical protein; hypothetical protein complement(423416..423652) Rhizobium leguminosarum bv. trifolii WSM1325 8007628 YP_002973213.1 CDS groEL NC_012848.1 423707 425335 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(423707..425335) Rhizobium leguminosarum bv. trifolii WSM1325 8007631 YP_002973214.1 CDS Rleg_5039 NC_012848.1 425485 425799 R PFAM: chaperonin Cpn10; KEGG: ret:RHE_PF00329 10 kDa chaperonin, heat shock protein; chaperonin Cpn10 complement(425485..425799) Rhizobium leguminosarum bv. trifolii WSM1325 8007632 YP_002973215.1 CDS Rleg_5040 NC_012848.1 426261 426551 D KEGG: ret:RHE_PF00328 hypothetical protein; hypothetical protein 426261..426551 Rhizobium leguminosarum bv. trifolii WSM1325 8007633 YP_002973216.1 CDS Rleg_5041 NC_012848.1 426661 427017 D KEGG: rec:RHECIAT_PC0000527 hypothetical protein; hypothetical protein 426661..427017 Rhizobium leguminosarum bv. trifolii WSM1325 8007634 YP_002973217.1 CDS Rleg_5042 NC_012848.1 427054 427398 D KEGG: rec:RHECIAT_PC0000525 hypothetical protein; hypothetical protein 427054..427398 Rhizobium leguminosarum bv. trifolii WSM1325 8007635 YP_002973218.1 CDS Rleg_5043 NC_012848.1 427404 427820 D KEGG: ret:RHE_PF00325 hypothetical protein; hypothetical protein 427404..427820 Rhizobium leguminosarum bv. trifolii WSM1325 8007636 YP_002973219.1 CDS Rleg_5044 NC_012848.1 427920 428189 R hypothetical protein complement(427920..428189) Rhizobium leguminosarum bv. trifolii WSM1325 8007637 YP_002973220.1 CDS Rleg_5045 NC_012848.1 428234 428497 R KEGG: rec:RHECIAT_CH0001117 hypothetical protein; hypothetical protein complement(428234..428497) Rhizobium leguminosarum bv. trifolii WSM1325 8007638 YP_002973221.1 CDS Rleg_5046 NC_012848.1 428785 429216 D PFAM: histidine triad (HIT) protein; KEGG: pde:Pden_2683 histidine triad (HIT) protein; histidine triad (HIT) protein 428785..429216 Rhizobium leguminosarum bv. trifolii WSM1325 8007639 YP_002973222.1 CDS Rleg_5047 NC_012848.1 429264 431114 R KEGG: ret:RHE_PF00322 hypothetical protein; hypothetical protein complement(429264..431114) Rhizobium leguminosarum bv. trifolii WSM1325 8007640 YP_002973223.1 CDS Rleg_5048 NC_012848.1 431192 432466 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_PC0000519 putative sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein complement(431192..432466) Rhizobium leguminosarum bv. trifolii WSM1325 8007641 YP_002973224.1 CDS Rleg_5049 NC_012848.1 432507 433232 R PFAM: protein of unknown function DUF624; KEGG: ret:RHE_PF00320 hypothetical protein; hypothetical protein complement(432507..433232) Rhizobium leguminosarum bv. trifolii WSM1325 8007642 YP_002973225.1 CDS Rleg_5050 NC_012848.1 433253 434362 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00319 putative sugar ABC transporter, ATP-binding protein; ABC transporter-like protein complement(433253..434362) Rhizobium leguminosarum bv. trifolii WSM1325 8007643 YP_002973226.1 CDS Rleg_5051 NC_012848.1 434378 435550 R PFAM: glycosyl hydrolase family 88; KEGG: rec:RHECIAT_PC0000516 putative glucoronyl hydrolase protein; glycoside hydrolase family protein complement(434378..435550) Rhizobium leguminosarum bv. trifolii WSM1325 8007644 YP_002973227.1 CDS Rleg_5052 NC_012848.1 435555 436391 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000515 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(435555..436391) Rhizobium leguminosarum bv. trifolii WSM1325 8007645 YP_002973228.1 CDS Rleg_5053 NC_012848.1 436388 437344 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00316 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(436388..437344) Rhizobium leguminosarum bv. trifolii WSM1325 8007646 YP_002973229.1 CDS Rleg_5054 NC_012848.1 437508 439304 D PFAM: Heparinase II/III family protein; KEGG: rec:RHECIAT_PC0000513 hypothetical protein; Heparinase II/III family protein 437508..439304 Rhizobium leguminosarum bv. trifolii WSM1325 8007647 YP_002973230.1 CDS Rleg_5055 NC_012848.1 439431 440216 D KEGG: rec:RHECIAT_PC0000512 hypothetical protein; hypothetical protein 439431..440216 Rhizobium leguminosarum bv. trifolii WSM1325 8007648 YP_002973231.1 CDS Rleg_5056 NC_012848.1 440247 441257 R PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_PF00313 AraC family transcriptional regulator; AraC family transcriptional regulator complement(440247..441257) Rhizobium leguminosarum bv. trifolii WSM1325 8007649 YP_002973232.1 CDS Rleg_5057 NC_012848.1 441254 441820 R PFAM: isochorismatase hydrolase; KEGG: ret:RHE_PF00312 isochorismatase protein; isochorismatase hydrolase complement(441254..441820) Rhizobium leguminosarum bv. trifolii WSM1325 8007650 YP_002973233.1 CDS Rleg_5058 NC_012848.1 441807 441917 R hypothetical protein complement(441807..441917) Rhizobium leguminosarum bv. trifolii WSM1325 8007651 YP_002973234.1 CDS Rleg_5059 NC_012848.1 441990 442658 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_PC0000511 probable two-component response regulator protein; winged helix family two component transcriptional regulator 441990..442658 Rhizobium leguminosarum bv. trifolii WSM1325 8007652 YP_002973235.1 CDS Rleg_5060 NC_012848.1 442648 444051 D PFAM: ATP-binding region ATPase domain protein; Two-component sensor kinase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_PF00310 two-component sensor histidine kinase protein; histidine kinase 442648..444051 Rhizobium leguminosarum bv. trifolii WSM1325 8007653 YP_002973236.1 CDS Rleg_5061 NC_012848.1 444132 445013 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00309 amino acid ABC transporter permease; binding-protein-dependent transport systems inner membrane component complement(444132..445013) Rhizobium leguminosarum bv. trifolii WSM1325 8007654 YP_002973237.1 CDS Rleg_5062 NC_012848.1 445025 445843 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000508 probable ABC transporter, ATP-binding protein; ABC transporter-like protein complement(445025..445843) Rhizobium leguminosarum bv. trifolii WSM1325 8007655 YP_002973238.1 CDS Rleg_5063 NC_012848.1 445940 446953 R KEGG: rec:RHECIAT_PC0000507 probable ABC transporter, substrate-binding protein; putative ABC transporter substrate-binding protein complement(445940..446953) Rhizobium leguminosarum bv. trifolii WSM1325 8007656 YP_002973239.1 CDS Rleg_5064 NC_012848.1 447326 448054 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_PC0000506 probable transcriptional regulator protein, GntR family; regulatory protein GntR complement(447326..448054) Rhizobium leguminosarum bv. trifolii WSM1325 8007657 YP_002973240.1 CDS Rleg_5065 NC_012848.1 448358 448618 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: rec:RHECIAT_PC0000505 hypothetical protein; CopG family transcriptional regulator 448358..448618 Rhizobium leguminosarum bv. trifolii WSM1325 8007658 YP_002973241.1 CDS Rleg_5066 NC_012848.1 448618 448893 D PFAM: plasmid stabilization system; KEGG: rec:RHECIAT_PC0000504 putative plasmid stabilization protein; plasmid stabilization system 448618..448893 Rhizobium leguminosarum bv. trifolii WSM1325 8007659 YP_002973242.1 CDS Rleg_5067 NC_012848.1 448900 449490 R KEGG: rec:RHECIAT_PC0000503 putative transcriptional regulator protein, LacI family; putative LacI family transcriptional regulator complement(448900..449490) Rhizobium leguminosarum bv. trifolii WSM1325 8007660 YP_002973243.1 CDS Rleg_5068 NC_012848.1 449589 450518 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_PF00300 rhizopine ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 449589..450518 Rhizobium leguminosarum bv. trifolii WSM1325 8007661 YP_002973244.1 CDS Rleg_5069 NC_012848.1 450535 452679 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: ret:RHE_PF00299 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 450535..452679 Rhizobium leguminosarum bv. trifolii WSM1325 8007662 YP_002973245.1 CDS Rleg_5070 NC_012848.1 452755 454017 R KEGG: rec:RHECIAT_PC0000496 hypothetical protein; hypothetical protein complement(452755..454017) Rhizobium leguminosarum bv. trifolii WSM1325 8007663 YP_002973246.1 CDS Rleg_5071 NC_012848.1 454239 455696 R PFAM: major facilitator superfamily MFS_1; General substrate transporter; protein of unknown function DUF1228; KEGG: bcn:Bcen_1565 major facilitator transporter; major facilitator superfamily protein complement(454239..455696) Rhizobium leguminosarum bv. trifolii WSM1325 8007664 YP_002973247.1 CDS Rleg_5072 NC_012848.1 455760 456605 R PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_5020 3-oxoadipate enol-lactonase; alpha/beta hydrolase fold protein complement(455760..456605) Rhizobium leguminosarum bv. trifolii WSM1325 8007665 YP_002973248.1 CDS Rleg_5073 NC_012848.1 456610 457770 R PFAM: monooxygenase FAD-binding; KEGG: bmj:BMULJ_03963 salicylate hydroxylase; Salicylate 1-monooxygenase complement(456610..457770) Rhizobium leguminosarum bv. trifolii WSM1325 8007666 YP_002973249.1 CDS Rleg_5074 NC_012848.1 457885 458808 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator LysR family; LysR family transcriptional regulator 457885..458808 Rhizobium leguminosarum bv. trifolii WSM1325 8007667 YP_002973250.1 CDS Rleg_5075 NC_012848.1 458813 460174 R PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_04338 permease of the major facilitator superfamily; major facilitator superfamily protein complement(458813..460174) Rhizobium leguminosarum bv. trifolii WSM1325 8007668 YP_002973251.1 CDS Rleg_5076 NC_012848.1 460429 461712 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PF00297 sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein complement(460429..461712) Rhizobium leguminosarum bv. trifolii WSM1325 8007669 YP_002973252.1 CDS Rleg_5077 NC_012848.1 461904 464426 D KEGG: ret:RHE_PF00296 hypothetical protein; hypothetical protein 461904..464426 Rhizobium leguminosarum bv. trifolii WSM1325 8007670 YP_002973253.1 CDS Rleg_5078 NC_012848.1 464444 465538 D PFAM: glycosyl hydrolase family 88; KEGG: ret:RHE_PF00295 hypothetical protein; glycoside hydrolase family protein 464444..465538 Rhizobium leguminosarum bv. trifolii WSM1325 8007671 YP_002973254.1 CDS Rleg_5079 NC_012848.1 465535 466899 D SMART: Parallel beta-helix repeat; KEGG: rec:RHECIAT_PC0000491 probable polygalacturonase protein; Parallel beta-helix repeat-containing protein 465535..466899 Rhizobium leguminosarum bv. trifolii WSM1325 8007672 YP_002973255.1 CDS Rleg_5080 NC_012848.1 466887 467993 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00293 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein 466887..467993 Rhizobium leguminosarum bv. trifolii WSM1325 8007673 YP_002973256.1 CDS Rleg_5081 NC_012848.1 467996 468991 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00292 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 467996..468991 Rhizobium leguminosarum bv. trifolii WSM1325 8007674 YP_002973257.1 CDS Rleg_5082 NC_012848.1 468993 470039 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000488 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 468993..470039 Rhizobium leguminosarum bv. trifolii WSM1325 8007675 YP_002973258.1 CDS Rleg_5083 NC_012848.1 470319 471470 R PFAM: ROK family protein; KEGG: rec:RHECIAT_PC0000487 probable transcriptional regulator protein, ROK family; ROK family protein complement(470319..471470) Rhizobium leguminosarum bv. trifolii WSM1325 8007676 YP_002973259.1 CDS Rleg_5084 NC_012848.1 471738 472769 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_PC0000486 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator 471738..472769 Rhizobium leguminosarum bv. trifolii WSM1325 8007677 YP_002973260.1 CDS Rleg_5085 NC_012848.1 472816 473895 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_PC0000485 probable transcriptional regulator protein, LacI family; LacI family transcriptional regulator complement(472816..473895) Rhizobium leguminosarum bv. trifolii WSM1325 8007678 YP_002973261.1 CDS Rleg_5086 NC_012848.1 473971 474603 R PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_PC0000484 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(473971..474603) Rhizobium leguminosarum bv. trifolii WSM1325 8007679 YP_002973262.1 CDS Rleg_5087 NC_012848.1 474715 475788 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_PC0000483 probable protein secretion protein, HlyD family; RND family efflux transporter MFP subunit 474715..475788 Rhizobium leguminosarum bv. trifolii WSM1325 8007680 YP_002973263.1 CDS Rleg_5088 NC_012848.1 475785 476870 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_PC0000482 probable protein secretion protein, HlyD family; RND family efflux transporter MFP subunit 475785..476870 Rhizobium leguminosarum bv. trifolii WSM1325 8007681 YP_002973264.1 CDS Rleg_5089 NC_012848.1 476867 479938 D PFAM: acriflavin resistance protein; KEGG: ret:RHE_PF00284 efflux transporter protein; acriflavin resistance protein 476867..479938 Rhizobium leguminosarum bv. trifolii WSM1325 8007682 YP_002973265.1 CDS Rleg_5090 NC_012848.1 480015 481196 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: rec:RHECIAT_PC0000480 hypothetical protein; hypothetical protein 480015..481196 Rhizobium leguminosarum bv. trifolii WSM1325 8007683 YP_002973266.1 CDS Rleg_5091 NC_012848.1 481346 482797 D PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rec:RHECIAT_PC0000479 probable nucleotide permease protein; permease for cytosine/purines uracil thiamine allantoin 481346..482797 Rhizobium leguminosarum bv. trifolii WSM1325 8007684 YP_002973267.1 CDS Rleg_5092 NC_012848.1 482863 484743 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_PC0000478 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(482863..484743) Rhizobium leguminosarum bv. trifolii WSM1325 8007685 YP_002973268.1 CDS Rleg_5093 NC_012848.1 485218 486261 D PFAM: Mg2 transporter protein CorA family protein; KEGG: rec:RHECIAT_PC0000476 magnesium/cobalt transporter protein; Mg2 transporter protein CorA family protein 485218..486261 Rhizobium leguminosarum bv. trifolii WSM1325 8007686 YP_002973269.1 CDS Rleg_5095 NC_012848.1 487212 488093 R PFAM: beta-lactamase domain protein; KEGG: ret:RHE_PF00279 beta-lactamase-like domain-containing protein; beta-lactamase domain-containing protein complement(487212..488093) Rhizobium leguminosarum bv. trifolii WSM1325 8007392 YP_002973270.1 CDS Rleg_5096 NC_012848.1 488126 488566 R KEGG: rec:RHECIAT_PC0000471 hypothetical protein; hypothetical protein complement(488126..488566) Rhizobium leguminosarum bv. trifolii WSM1325 8007688 YP_002973271.1 CDS Rleg_5097 NC_012848.1 488783 492007 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rec:RHECIAT_PC0000470 putative alpha amylase protein; alpha amylase catalytic subunit 488783..492007 Rhizobium leguminosarum bv. trifolii WSM1325 8007689 YP_002973272.1 CDS Rleg_5098 NC_012848.1 492008 495289 D KEGG: rec:RHECIAT_PC0000469 probable trehalose synthase protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; SMART: alpha amylase catalytic sub domain; trehalose synthase 492008..495289 Rhizobium leguminosarum bv. trifolii WSM1325 8007690 YP_002973273.1 CDS Rleg_5099 NC_012848.1 495286 497496 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 495286..497496 Rhizobium leguminosarum bv. trifolii WSM1325 8007691 YP_002973274.1 CDS Rleg_5100 NC_012848.1 497539 498300 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PF00271 iron ABC transporter, ATP-binding protein; ABC transporter-like protein complement(497539..498300) Rhizobium leguminosarum bv. trifolii WSM1325 8007692 YP_002973275.1 CDS Rleg_5101 NC_012848.1 498297 499337 R PFAM: transport system permease protein; ABC-3 protein; KEGG: rec:RHECIAT_PC0000463 putative iron ABC transporter, permease protein; transport system permease complement(498297..499337) Rhizobium leguminosarum bv. trifolii WSM1325 8007693 YP_002973276.1 CDS Rleg_5102 NC_012848.1 499334 500359 R PFAM: periplasmic binding protein; KEGG: ret:RHE_PF00269 iron ABC transporter, substrate-binding protein; periplasmic binding protein complement(499334..500359) Rhizobium leguminosarum bv. trifolii WSM1325 8007694 YP_002973277.1 CDS Rleg_5103 NC_012848.1 500513 500620 R hypothetical protein complement(500513..500620) Rhizobium leguminosarum bv. trifolii WSM1325 8007695 YP_002973278.1 CDS Rleg_5104 NC_012848.1 500625 501140 R KEGG: hypothetical protein LOC100080937; hypothetical protein complement(500625..501140) Rhizobium leguminosarum bv. trifolii WSM1325 8007696 YP_002973279.1 CDS Rleg_5105 NC_012848.1 501150 501761 R KEGG: sus:Acid_0190 hypothetical protein; hypothetical protein complement(501150..501761) Rhizobium leguminosarum bv. trifolii WSM1325 8007697 YP_002973280.1 CDS Rleg_5106 NC_012848.1 501835 502698 R PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PF00268 putative hydrolase protein; alpha/beta hydrolase fold protein complement(501835..502698) Rhizobium leguminosarum bv. trifolii WSM1325 8007698 YP_002973281.1 CDS Rleg_5107 NC_012848.1 502701 502982 R KEGG: ret:RHE_PF00267 hypothetical protein; hypothetical protein complement(502701..502982) Rhizobium leguminosarum bv. trifolii WSM1325 8007699 YP_002973282.1 CDS Rleg_5108 NC_012848.1 503059 503508 R KEGG: rec:RHECIAT_PC0000459 hypothetical protein; hypothetical protein complement(503059..503508) Rhizobium leguminosarum bv. trifolii WSM1325 8007700 YP_002973283.1 CDS Rleg_5109 NC_012848.1 503730 510029 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_PC0000458 probable two-component sensor histidine kinase/response regulator hybrid protein; GAF sensor hybrid histidine kinase 503730..510029 Rhizobium leguminosarum bv. trifolii WSM1325 8007701 YP_002973284.1 CDS Rleg_5110 NC_012848.1 510040 511716 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: rec:RHECIAT_PC0000457 probable two-component sensor histidine kinase/response regulator hybrid protein; histidine kinase 510040..511716 Rhizobium leguminosarum bv. trifolii WSM1325 8007702 YP_002973285.1 CDS Rleg_5111 NC_012848.1 511780 512247 R KEGG: sme:SM_b20121 hypothetical protein; putative CopG/Arc/MetJ family transcriptional regulator complement(511780..512247) Rhizobium leguminosarum bv. trifolii WSM1325 8006972 YP_002973286.1 CDS Rleg_5112 NC_012848.1 512457 514217 D KEGG: ret:RHE_PF00263 1,4-alpha-glucan branching protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 512457..514217 Rhizobium leguminosarum bv. trifolii WSM1325 8006973 YP_002973287.1 CDS Rleg_5113 NC_012848.1 514247 516106 D KEGG: rec:RHECIAT_PC0000455 4-alpha-glucanotransferase protein; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 514247..516106 Rhizobium leguminosarum bv. trifolii WSM1325 8006974 YP_002973288.1 CDS Rleg_5114 NC_012848.1 516299 516460 D KEGG: rec:RHECIAT_PC0000451 hypothetical protein; hypothetical protein 516299..516460 Rhizobium leguminosarum bv. trifolii WSM1325 8006975 YP_002973289.1 CDS Rleg_5115 NC_012848.1 516534 517034 R hypothetical protein complement(516534..517034) Rhizobium leguminosarum bv. trifolii WSM1325 8006976 YP_002973290.1 CDS Rleg_5116 NC_012848.1 517327 517617 D KEGG: ret:RHE_PF00258 hypothetical protein; hypothetical protein 517327..517617 Rhizobium leguminosarum bv. trifolii WSM1325 8006977 YP_002973291.1 CDS Rleg_5117 NC_012848.1 517717 518124 D KEGG: ret:RHE_PF00257 hypothetical protein; hypothetical protein 517717..518124 Rhizobium leguminosarum bv. trifolii WSM1325 8006978 YP_002973292.1 CDS Rleg_5118 NC_012848.1 518191 518439 D hypothetical protein 518191..518439 Rhizobium leguminosarum bv. trifolii WSM1325 8006979 YP_002973293.1 CDS Rleg_5119 NC_012848.1 518619 518846 D KEGG: rec:RHECIAT_PC0000447 hypothetical protein; hypothetical protein 518619..518846 Rhizobium leguminosarum bv. trifolii WSM1325 8006980 YP_002973294.1 CDS Rleg_5120 NC_012848.1 518980 519243 D KEGG: rec:RHECIAT_PC0000446 hypothetical protein; hypothetical protein 518980..519243 Rhizobium leguminosarum bv. trifolii WSM1325 8006981 YP_002973295.1 CDS Rleg_5122 NC_012848.1 520669 521739 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_PC0000445 probable transcriptional regulator protein, LacI family; LacI family transcriptional regulator complement(520669..521739) Rhizobium leguminosarum bv. trifolii WSM1325 8007393 YP_002973296.1 CDS Rleg_5123 NC_012848.1 521917 522744 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rec:RHECIAT_PC0000444 glutamine ABC transporter, substrate binding protein; family 3 extracellular solute-binding protein 521917..522744 Rhizobium leguminosarum bv. trifolii WSM1325 8006983 YP_002973297.1 CDS Rleg_5124 NC_012848.1 522835 524367 D KEGG: glutamine ABC transporter; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; SMART: AAA ATPase; polar amino acid ABC transporter inner membrane subunit 522835..524367 Rhizobium leguminosarum bv. trifolii WSM1325 8006984 YP_002973298.1 CDS Rleg_5125 NC_012848.1 524464 525600 D PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_PF00253 D-amino acid oxidase protein; FAD dependent oxidoreductase 524464..525600 Rhizobium leguminosarum bv. trifolii WSM1325 8006985 YP_002973299.1 CDS Rleg_5126 NC_012848.1 525675 526187 D KEGG: rec:RHECIAT_PC0000441 hypothetical protein; hypothetical protein 525675..526187 Rhizobium leguminosarum bv. trifolii WSM1325 8006986 YP_002973300.1 CDS Rleg_5127 NC_012848.1 526191 526919 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ret:RHE_PF00249 putative metal-dependent hydrolase protein; Endonuclease/exonuclease/phosphatase complement(526191..526919) Rhizobium leguminosarum bv. trifolii WSM1325 8006987 YP_002973301.1 CDS Rleg_5128 NC_012848.1 527059 528021 D KEGG: rec:RHECIAT_PC0000437 hypothetical protein; hypothetical protein 527059..528021 Rhizobium leguminosarum bv. trifolii WSM1325 8006988 YP_002973302.1 CDS Rleg_5129 NC_012848.1 527968 529479 R PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: rec:RHECIAT_PC0000436 probable phospholipase D protein; phospholipase D/Transphosphatidylase complement(527968..529479) Rhizobium leguminosarum bv. trifolii WSM1325 8006989 YP_002973303.1 CDS Rleg_5130 NC_012848.1 529597 530841 D PFAM: protein of unknown function DUF763; KEGG: rec:RHECIAT_PC0000435 hypothetical protein; hypothetical protein 529597..530841 Rhizobium leguminosarum bv. trifolii WSM1325 8006990 YP_002973304.1 CDS Rleg_5131 NC_012848.1 530863 531312 R KEGG: smd:Smed_5578 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(530863..531312) Rhizobium leguminosarum bv. trifolii WSM1325 8006991 YP_002973305.1 CDS Rleg_5132 NC_012848.1 531512 532588 R KEGG: hypothetical protein; hypothetical protein complement(531512..532588) Rhizobium leguminosarum bv. trifolii WSM1325 8006992 YP_002973306.1 CDS Rleg_5133 NC_012848.1 532588 534564 R PFAM: MscS Mechanosensitive ion channel; KEGG: small-conductance mechanosensitive channel transmembrane protein; mechanosensitive ion channel MscS complement(532588..534564) Rhizobium leguminosarum bv. trifolii WSM1325 8006993 YP_002973307.1 CDS Rleg_5134 NC_012848.1 534577 535590 R KEGG: nonspecific acid phosphatase precursor; nonspecific acid phosphatase complement(534577..535590) Rhizobium leguminosarum bv. trifolii WSM1325 8006994 YP_002973308.1 CDS Rleg_5135 NC_012848.1 535587 536561 R PFAM: protein of unknown function DUF323; KEGG: hypothetical protein; hypothetical protein complement(535587..536561) Rhizobium leguminosarum bv. trifolii WSM1325 8006995 YP_002973309.1 CDS Rleg_5136 NC_012848.1 536652 537944 R KEGG: hypothetical protein; hypothetical protein complement(536652..537944) Rhizobium leguminosarum bv. trifolii WSM1325 8006996 YP_002973310.1 CDS Rleg_5137 NC_012848.1 537941 539494 R PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; von Willebrand factor type A; SMART: Tetratricopeptide domain protein; von Willebrand factor type A; KEGG: tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat-containing protein complement(537941..539494) Rhizobium leguminosarum bv. trifolii WSM1325 8006997 YP_002973311.1 CDS Rleg_5138 NC_012848.1 539491 540480 R PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: von Willebrand factor, type A; von Willebrand factor type A complement(539491..540480) Rhizobium leguminosarum bv. trifolii WSM1325 8006998 YP_002973312.1 CDS Rleg_5139 NC_012848.1 540467 540988 R KEGG: hypothetical protein; hypothetical protein complement(540467..540988) Rhizobium leguminosarum bv. trifolii WSM1325 8006999 YP_002973313.1 CDS Rleg_5140 NC_012848.1 540988 541926 R PFAM: protein of unknown function DUF58; KEGG: hypothetical protein; hypothetical protein complement(540988..541926) Rhizobium leguminosarum bv. trifolii WSM1325 8007000 YP_002973314.1 CDS Rleg_5141 NC_012848.1 541923 542900 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: methanol dehydrogenase regulator MoxR-like protein ; K03924 MoxR-like ATPase; ATPase complement(541923..542900) Rhizobium leguminosarum bv. trifolii WSM1325 8007001 YP_002973315.1 CDS Rleg_5142 NC_012848.1 542959 544593 R PFAM: sulfatase; KEGG: sulfatase (sulfuric ester hydrolase) protein; sulfatase complement(542959..544593) Rhizobium leguminosarum bv. trifolii WSM1325 8007002 YP_002973316.1 CDS Rleg_5143 NC_012848.1 544747 545982 R PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: hypothetical protein; hypothetical protein complement(544747..545982) Rhizobium leguminosarum bv. trifolii WSM1325 8007003 YP_002973317.1 CDS Rleg_5144 NC_012848.1 545992 546987 R KEGG: hypothetical protein; hypothetical protein complement(545992..546987) Rhizobium leguminosarum bv. trifolii WSM1325 8006971 YP_002973318.1 CDS Rleg_5145 NC_012848.1 547070 548779 R KEGG: hypothetical protein; hypothetical protein complement(547070..548779) Rhizobium leguminosarum bv. trifolii WSM1325 8007043 YP_002973319.1 CDS Rleg_5146 NC_012848.1 548751 549047 R hypothetical protein complement(548751..549047) Rhizobium leguminosarum bv. trifolii WSM1325 8007044 YP_002973320.1 CDS Rleg_5150 NC_012848.1 551524 552918 D PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: smd:Smed_5642 protein of unknown function DUF1214; hypothetical protein 551524..552918 Rhizobium leguminosarum bv. trifolii WSM1325 8007394 YP_002973321.1 CDS Rleg_5151 NC_012848.1 553128 554045 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_PF00245 multidrug ABC transporter permease; hypothetical protein complement(553128..554045) Rhizobium leguminosarum bv. trifolii WSM1325 8007047 YP_002973322.1 CDS Rleg_5152 NC_012848.1 554144 555067 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: atu:Atu0672 LysR family transcriptional regulator; LysR family transcriptional regulator complement(554144..555067) Rhizobium leguminosarum bv. trifolii WSM1325 8007048 YP_002973323.1 CDS Rleg_5153 NC_012848.1 555168 556193 D PFAM: conserved hypothetical protein; KEGG: atc:AGR_C_1202 hypothetical protein; hypothetical protein 555168..556193 Rhizobium leguminosarum bv. trifolii WSM1325 8007049 YP_002973324.1 CDS Rleg_5154 NC_012848.1 556675 557703 D KEGG: oan:Oant_3072 putative ABC transporter periplasmic sugar-binding protein; putative ABC transporter periplasmic sugar-binding protein 556675..557703 Rhizobium leguminosarum bv. trifolii WSM1325 8007050 YP_002973325.1 CDS Rleg_5155 NC_012848.1 557772 559310 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sugar ABC transporter ; K10441 ribose transport system ATP-binding protein; ABC transporter-like protein 557772..559310 Rhizobium leguminosarum bv. trifolii WSM1325 8007051 YP_002973326.1 CDS Rleg_5156 NC_012848.1 559339 560331 D PFAM: inner-membrane translocator; KEGG: sugar ABC transporter ; K10440 ribose transport system permease protein; inner-membrane translocator 559339..560331 Rhizobium leguminosarum bv. trifolii WSM1325 8007052 YP_002973327.1 CDS Rleg_5157 NC_012848.1 560333 561337 D PFAM: putative sugar-binding domain protein; KEGG: ret:RHE_PB00075 CRP family transcriptional regulator; DeoR family transcriptional regulator 560333..561337 Rhizobium leguminosarum bv. trifolii WSM1325 8007053 YP_002973328.1 CDS Rleg_5158 NC_012848.1 561334 562329 D PFAM: aldo/keto reductase; KEGG: aldoketo reductase protein; aldo/keto reductase 561334..562329 Rhizobium leguminosarum bv. trifolii WSM1325 8007054 YP_002973329.1 CDS Rleg_5159 NC_012848.1 562342 564090 D PFAM: FAD dependent oxidoreductase; KEGG: glycerol-3-phosphate dehydrogenase protein ; K00111 glycerol-3-phosphate dehydrogenase; Glycerol-3-phosphate dehydrogenase 562342..564090 Rhizobium leguminosarum bv. trifolii WSM1325 8007055 YP_002973330.1 CDS Rleg_5160 NC_012848.1 564063 564905 D PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: oan:Oant_3078 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 564063..564905 Rhizobium leguminosarum bv. trifolii WSM1325 8007056 YP_002973331.1 CDS Rleg_5161 NC_012848.1 564937 566466 D PFAM: carbohydrate kinase FGGY; KEGG: ret:RHE_PB00071 L-xylulose kinase protein; carbohydrate kinase FGGY 564937..566466 Rhizobium leguminosarum bv. trifolii WSM1325 8007057 YP_002973332.1 CDS Rleg_5162 NC_012848.1 566463 568088 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sme:SM_b20496 GMC oxidoreductase protein; Choline dehydrogenase 566463..568088 Rhizobium leguminosarum bv. trifolii WSM1325 8007058 YP_002973333.1 CDS Rleg_5163 NC_012848.1 568447 568650 R PFAM: Cold-shock protein DNA-binding; Ribonuclease B OB region domain; SMART: Cold shock protein; KEGG: cspA; cold shock protein ; K03704 cold shock protein (beta-ribbon, CspA family); cold-shock DNA-binding domain-containing protein complement(568447..568650) Rhizobium leguminosarum bv. trifolii WSM1325 8007059 YP_002973334.1 CDS Rleg_5164 NC_012848.1 568763 569383 R KEGG: hypothetical protein; hypothetical protein complement(568763..569383) Rhizobium leguminosarum bv. trifolii WSM1325 8007060 YP_002973335.1 CDS Rleg_5165 NC_012848.1 569648 570760 D KEGG: ret:RHE_PF00244 hypothetical protein; hypothetical protein 569648..570760 Rhizobium leguminosarum bv. trifolii WSM1325 8007061 YP_002973336.1 CDS Rleg_5166 NC_012848.1 571171 573180 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: mcpGd; methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 571171..573180 Rhizobium leguminosarum bv. trifolii WSM1325 8007062 YP_002973337.1 CDS Rleg_5167 NC_012848.1 573365 573754 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: oan:Oant_4408 glutathione-dependent formaldehyde-activating GFA; glutathione-dependent formaldehyde-activating protein 573365..573754 Rhizobium leguminosarum bv. trifolii WSM1325 8007063 YP_002973338.1 CDS Rleg_5168 NC_012848.1 574198 575043 D PFAM: alpha/beta hydrolase fold; KEGG: hydrolase protein; alpha/beta hydrolase fold protein 574198..575043 Rhizobium leguminosarum bv. trifolii WSM1325 8007064 YP_002973339.1 CDS Rleg_5169 NC_012848.1 575086 575829 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000432 dipeptide ABC transporter, ATP-binding protein; ABC transporter-like protein complement(575086..575829) Rhizobium leguminosarum bv. trifolii WSM1325 8007065 YP_002973340.1 CDS Rleg_5170 NC_012848.1 575826 576683 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000431 dipeptide ABC transporter, ATP-binding protein; ABC transporter-like protein complement(575826..576683) Rhizobium leguminosarum bv. trifolii WSM1325 8007066 YP_002973341.1 CDS Rleg_5171 NC_012848.1 576680 577615 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000430 dipeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(576680..577615) Rhizobium leguminosarum bv. trifolii WSM1325 8007067 YP_002973342.1 CDS Rleg_5172 NC_012848.1 577620 578717 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000429 dipeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(577620..578717) Rhizobium leguminosarum bv. trifolii WSM1325 8007068 YP_002973343.1 CDS Rleg_5173 NC_012848.1 578724 580310 R PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PC0000428 dipeptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein complement(578724..580310) Rhizobium leguminosarum bv. trifolii WSM1325 8007069 YP_002973344.1 CDS Rleg_5174 NC_012848.1 580457 581410 R PFAM: dihydrodipicolinate synthetase; KEGG: rec:RHECIAT_PC0000427 dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase complement(580457..581410) Rhizobium leguminosarum bv. trifolii WSM1325 8007070 YP_002973345.1 CDS Rleg_5175 NC_012848.1 581471 582361 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ret:RHE_PF00237 calcium-binding protein, regucalcin; SMP-30/Gluconolaconase/LRE domain-containing protein complement(581471..582361) Rhizobium leguminosarum bv. trifolii WSM1325 8007071 YP_002973346.1 CDS Rleg_5176 NC_012848.1 582358 583188 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_PC0000425 putative UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase complement(582358..583188) Rhizobium leguminosarum bv. trifolii WSM1325 8007072 YP_002973347.1 CDS Rleg_5177 NC_012848.1 583210 583926 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PF00235 GntR family transcriptional regulator; regulatory protein GntR complement(583210..583926) Rhizobium leguminosarum bv. trifolii WSM1325 8007073 YP_002973348.1 CDS Rleg_5178 NC_012848.1 584225 586162 D PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PC0000423 probable oligopeptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein 584225..586162 Rhizobium leguminosarum bv. trifolii WSM1325 8007074 YP_002973349.1 CDS Rleg_5179 NC_012848.1 586286 587272 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00233 oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 586286..587272 Rhizobium leguminosarum bv. trifolii WSM1325 8007075 YP_002973350.1 CDS Rleg_5180 NC_012848.1 587282 588403 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000421 probable oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 587282..588403 Rhizobium leguminosarum bv. trifolii WSM1325 8007076 YP_002973351.1 CDS Rleg_5181 NC_012848.1 588411 590132 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00231 oligopeptide ABC transporter, ATP-binding protein; ABC transporter-like protein 588411..590132 Rhizobium leguminosarum bv. trifolii WSM1325 8007077 YP_002973352.1 CDS Rleg_5182 NC_012848.1 590129 591340 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rec:RHECIAT_PC0000419 putative racemase protein; Mandelate racemase/muconate lactonizing protein 590129..591340 Rhizobium leguminosarum bv. trifolii WSM1325 8007078 YP_002973353.1 CDS Rleg_5183 NC_012848.1 591353 592540 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PF00229 putative isomerase protein; Mandelate racemase/muconate lactonizing protein 591353..592540 Rhizobium leguminosarum bv. trifolii WSM1325 8007079 YP_002973354.1 CDS Rleg_5184 NC_012848.1 592718 593290 R PFAM: NADPH-dependent FMN reductase; KEGG: rec:RHECIAT_PC0000417 putative NADPH:quinone reductase protein; NADPH-dependent FMN reductase complement(592718..593290) Rhizobium leguminosarum bv. trifolii WSM1325 8007080 YP_002973355.1 CDS Rleg_5185 NC_012848.1 593375 594040 R PFAM: nitroreductase; KEGG: ret:RHE_PF00227 nitroreductase protein; nitroreductase complement(593375..594040) Rhizobium leguminosarum bv. trifolii WSM1325 8007081 YP_002973356.1 CDS Rleg_5186 NC_012848.1 594432 594785 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ret:RHE_PF00226 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(594432..594785) Rhizobium leguminosarum bv. trifolii WSM1325 8007082 YP_002973357.1 CDS Rleg_5187 NC_012848.1 595002 595694 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rec:RHECIAT_PC0000414 probable transcriptional regulator protein (NodW-like); LuxR family two component transcriptional regulator complement(595002..595694) Rhizobium leguminosarum bv. trifolii WSM1325 8007083 YP_002973358.1 CDS Rleg_5188 NC_012848.1 595696 596073 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ret:RHE_PF00224 putative two-component response regulator protein; response regulator receiver protein complement(595696..596073) Rhizobium leguminosarum bv. trifolii WSM1325 8007084 YP_002973359.1 CDS Rleg_5189 NC_012848.1 596076 596717 R PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rec:RHECIAT_PC0000412 two-component response regulator protein - NodW mutant supressor protein; LuxR family two component transcriptional regulator complement(596076..596717) Rhizobium leguminosarum bv. trifolii WSM1325 8007085 YP_002973360.1 CDS Rleg_5190 NC_012848.1 596714 600349 R KEGG: ret:RHE_PF00222 two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: MASE1 domain protein; ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(596714..600349) Rhizobium leguminosarum bv. trifolii WSM1325 8007086 YP_002973361.1 CDS Rleg_5191 NC_012848.1 600701 601453 D PFAM: NmrA family protein; KEGG: rec:RHECIAT_PC0000410 hypothetical protein; NmrA family protein 600701..601453 Rhizobium leguminosarum bv. trifolii WSM1325 8007087 YP_002973362.1 CDS Rleg_5193 NC_012848.1 603773 604966 D TIGRFAM: plasmid partitioning protein RepA; PFAM: Cobyrinic acid ac-diamide synthase; regulatory protein MerR; KEGG: rec:RHECIAT_PC0000407 plasmid partitioning protein RepAc1; plasmid partitioning protein RepA 603773..604966 Rhizobium leguminosarum bv. trifolii WSM1325 8007395 YP_002973363.1 CDS Rleg_5194 NC_012848.1 604971 605972 D KEGG: rec:RHECIAT_PC0000406 plasmid partitioning protein RepBc1; TIGRFAM: plasmid partitioning protein RepB; parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; SMART: ParB domain protein nuclease; plasmid partitioning protein RepB 604971..605972 Rhizobium leguminosarum bv. trifolii WSM1325 8007089 YP_002973364.1 CDS Rleg_5195 NC_012848.1 606127 607431 D PFAM: replication protein C; KEGG: ret:RHE_PF00212 plasmid replication protein RepCf2; replication initiation protein RepC 606127..607431 Rhizobium leguminosarum bv. trifolii WSM1325 8007090 YP_002973365.1 CDS Rleg_5196 NC_012848.1 607540 608424 D PFAM: dihydrodipicolinate synthetase; KEGG: rec:RHECIAT_PC0000127 dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase 607540..608424 Rhizobium leguminosarum bv. trifolii WSM1325 8007091 YP_002973366.1 CDS Rleg_5197 NC_012848.1 608450 609109 D PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: rec:RHECIAT_PC0000128 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator 608450..609109 Rhizobium leguminosarum bv. trifolii WSM1325 8007092 YP_002973367.1 CDS Rleg_5198 NC_012848.1 609165 610493 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_PC0000129 probable sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein 609165..610493 Rhizobium leguminosarum bv. trifolii WSM1325 8007093 YP_002973368.1 CDS Rleg_5199 NC_012848.1 610493 611431 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00097 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 610493..611431 Rhizobium leguminosarum bv. trifolii WSM1325 8007094 YP_002973369.1 CDS Rleg_5200 NC_012848.1 611431 612246 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000131 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 611431..612246 Rhizobium leguminosarum bv. trifolii WSM1325 8007095 YP_002973370.1 CDS Rleg_5201 NC_012848.1 612265 613245 D PFAM: PfkB domain protein; KEGG: rec:RHECIAT_PC0000132 probable carbohydrate kinase protein, PfkB family; PfkB domain-containing protein 612265..613245 Rhizobium leguminosarum bv. trifolii WSM1325 8007096 YP_002973371.1 CDS Rleg_5202 NC_012848.1 613354 614358 R PFAM: phosphate transporter; KEGG: pit; phosphate transporter protein ; K03306 inorganic phosphate transporter, PiT family; phosphate transporter complement(613354..614358) Rhizobium leguminosarum bv. trifolii WSM1325 8007097 YP_002973372.1 CDS Rleg_5203 NC_012848.1 614358 614999 R PFAM: protein of unknown function DUF47; KEGG: rec:RHECIAT_CH0001043 probable phosphate transporter regulator protein; hypothetical protein complement(614358..614999) Rhizobium leguminosarum bv. trifolii WSM1325 8007098 YP_002973373.1 CDS Rleg_5204 NC_012848.1 615295 616617 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PC00078 sn-glycerol-3-phosphate ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein 615295..616617 Rhizobium leguminosarum bv. trifolii WSM1325 8007099 YP_002973374.1 CDS Rleg_5205 NC_012848.1 616683 617567 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00079 sn-glycerol-3-phosphate ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 616683..617567 Rhizobium leguminosarum bv. trifolii WSM1325 8007100 YP_002973375.1 CDS Rleg_5206 NC_012848.1 617580 618428 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00080 sn-glycerol-3-phosphate ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 617580..618428 Rhizobium leguminosarum bv. trifolii WSM1325 8007101 YP_002973376.1 CDS ugpC NC_012848.1 618430 619476 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 618430..619476 Rhizobium leguminosarum bv. trifolii WSM1325 8007102 YP_002973377.1 CDS Rleg_5208 NC_012848.1 619532 620281 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ret:RHE_PC00082 glycerophosphoryldiester phosphodiesterase protein; glycerophosphoryl diester phosphodiesterase 619532..620281 Rhizobium leguminosarum bv. trifolii WSM1325 8007103 YP_002973378.1 CDS Rleg_5209 NC_012848.1 620291 621076 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: ret:RHE_PC00083 glycerol-3-phosphate transcriptional regulator protein; DeoR family transcriptional regulator 620291..621076 Rhizobium leguminosarum bv. trifolii WSM1325 8007104 YP_002973379.1 CDS Rleg_5210 NC_012848.1 621073 621918 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: ret:RHE_PC00084 hypothetical protein; HAD-superfamily hydrolase 621073..621918 Rhizobium leguminosarum bv. trifolii WSM1325 8007105 YP_002973380.1 CDS Rleg_5211 NC_012848.1 621876 622721 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter ; K02026 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component complement(621876..622721) Rhizobium leguminosarum bv. trifolii WSM1325 8007106 YP_002973381.1 CDS Rleg_5212 NC_012848.1 622727 623665 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter ; K02025 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component complement(622727..623665) Rhizobium leguminosarum bv. trifolii WSM1325 8007107 YP_002973382.1 CDS Rleg_5213 NC_012848.1 623753 625000 R PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter; family 1 extracellular solute-binding protein complement(623753..625000) Rhizobium leguminosarum bv. trifolii WSM1325 8007108 YP_002973383.1 CDS Rleg_5214 NC_012848.1 625573 626607 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: mlo:mlr7217 transcriptional regulator; LacI family transcriptional regulator 625573..626607 Rhizobium leguminosarum bv. trifolii WSM1325 8007109 YP_002973384.1 CDS Rleg_5215 NC_012848.1 626628 627563 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: lipase protein; Alpha/beta hydrolase fold-3 domain-containing protein complement(626628..627563) Rhizobium leguminosarum bv. trifolii WSM1325 8007110 YP_002973385.1 CDS Rleg_5216 NC_012848.1 627560 628708 R PFAM: oxidoreductase domain protein; KEGG: oxidoreductase protein; oxidoreductase domain-containing protein complement(627560..628708) Rhizobium leguminosarum bv. trifolii WSM1325 8007111 YP_002973386.1 CDS Rleg_5217 NC_012848.1 628989 629807 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr7228 hypothetical protein; xylose isomerase domain-containing protein 628989..629807 Rhizobium leguminosarum bv. trifolii WSM1325 8007112 YP_002973387.1 CDS Rleg_5218 NC_012848.1 629900 630661 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: transcriptional regulator protein; DeoR family transcriptional regulator complement(629900..630661) Rhizobium leguminosarum bv. trifolii WSM1325 8007113 YP_002973388.1 CDS Rleg_5219 NC_012848.1 630918 631718 D PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: aldolase ; K01623 fructose-bisphosphate aldolase, class I; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 630918..631718 Rhizobium leguminosarum bv. trifolii WSM1325 8007114 YP_002973389.1 CDS Rleg_5220 NC_012848.1 631722 632663 D PFAM: PfkB domain protein; KEGG: fructokinase protein; PfkB domain-containing protein 631722..632663 Rhizobium leguminosarum bv. trifolii WSM1325 8007115 YP_002973390.1 CDS Rleg_5221 NC_012848.1 633004 634149 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sugar ABC transporter ; K10112 maltose/maltodextrin transport system ATP-binding protein; ABC transporter-like protein 633004..634149 Rhizobium leguminosarum bv. trifolii WSM1325 8007116 YP_002973391.1 CDS Rleg_5222 NC_012848.1 634285 635361 D PFAM: oxidoreductase domain protein; KEGG: sme:SMc03812 putative oxidoreductase protein; oxidoreductase domain-containing protein 634285..635361 Rhizobium leguminosarum bv. trifolii WSM1325 8007117 YP_002973392.1 CDS Rleg_5223 NC_012848.1 635361 636206 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc03811 hypothetical protein; xylose isomerase domain-containing protein 635361..636206 Rhizobium leguminosarum bv. trifolii WSM1325 8007118 YP_002973393.1 CDS Rleg_5224 NC_012848.1 636203 637012 D PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc03810 hypothetical protein; alpha/beta hydrolase fold protein 636203..637012 Rhizobium leguminosarum bv. trifolii WSM1325 8007119 YP_002973394.1 CDS Rleg_5225 NC_012848.1 637017 637718 D PFAM: ribulose-phosphate 3-epimerase; KEGG: mlo:mlr7233 ribulose-5-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 637017..637718 Rhizobium leguminosarum bv. trifolii WSM1325 8007120 YP_002973395.1 CDS Rleg_5226 NC_012848.1 637733 638698 D PFAM: ROK family protein; KEGG: transcriptional regulator protein ; K00845 glucokinase; ROK family protein 637733..638698 Rhizobium leguminosarum bv. trifolii WSM1325 8007121 YP_002973396.1 CDS Rleg_5228 NC_012848.1 639186 640223 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rec:RHECIAT_PC0000398 myo-inositol 2-dehydrogenase protein; oxidoreductase domain-containing protein 639186..640223 Rhizobium leguminosarum bv. trifolii WSM1325 8007396 YP_002973397.1 CDS Rleg_5229 NC_012848.1 640356 640751 R KEGG: ret:RHE_PF00204 hypothetical protein; hypothetical protein complement(640356..640751) Rhizobium leguminosarum bv. trifolii WSM1325 8007403 YP_002973398.1 CDS Rleg_5230 NC_012848.1 640923 641996 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_PC0000396 probable adenosylmethionine--8-amino-7-oxononanoate aminotransferase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(640923..641996) Rhizobium leguminosarum bv. trifolii WSM1325 8007404 YP_002973399.1 CDS Rleg_5231 NC_012848.1 642011 643390 R PFAM: aminotransferase class-III; KEGG: ret:RHE_PF00202 hypothetical protein; hypothetical protein complement(642011..643390) Rhizobium leguminosarum bv. trifolii WSM1325 8007405 YP_002973400.1 CDS Rleg_5232 NC_012848.1 643434 644930 R PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000395 probable succinate-semialdehyde dehydrogenase (NAD(P)(+)) protein; succinate-semialdehyde dehydrogenase complement(643434..644930) Rhizobium leguminosarum bv. trifolii WSM1325 8007406 YP_002973401.1 CDS Rleg_5233 NC_012848.1 645051 645548 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ret:RHE_PF00200 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(645051..645548) Rhizobium leguminosarum bv. trifolii WSM1325 8007407 YP_002973402.1 CDS Rleg_5234 NC_012848.1 645650 647035 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PF00188 GntR family transcriptional regulator; GntR family transcriptional regulator with aminotransferase domain 645650..647035 Rhizobium leguminosarum bv. trifolii WSM1325 8007408 YP_002973403.1 CDS Rleg_5235 NC_012848.1 647158 647943 D KEGG: ret:RHE_PF00187 amino acid ABC transporter ATP-binding protein; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ectoine/hydroxyectoine ABC transporter ATP-binding protein 647158..647943 Rhizobium leguminosarum bv. trifolii WSM1325 8007409 YP_002973404.1 CDS Rleg_5236 NC_012848.1 647999 648847 D KEGG: rec:RHECIAT_PC0000380 probable amino acid ABC transporter, substrate-binding protein; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ectoine/hydroxyectoine ABC transporter solute-binding protein 647999..648847 Rhizobium leguminosarum bv. trifolii WSM1325 8007410 YP_002973405.1 CDS Rleg_5237 NC_012848.1 649028 649687 D TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuC; polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000379 probable amino acid ABC transporter, permease protein; ectoine/hydroxyectoine ABC transporter permease EhuC 649028..649687 Rhizobium leguminosarum bv. trifolii WSM1325 8007411 YP_002973406.1 CDS Rleg_5238 NC_012848.1 649692 650351 D TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuD; polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000378 probable amino acid ABC transporter, permease protein; ectoine/hydroxyectoine ABC transporter permease EhuD 649692..650351 Rhizobium leguminosarum bv. trifolii WSM1325 8007412 YP_002973407.1 CDS Rleg_5239 NC_012848.1 650354 651133 D TIGRFAM: ectoine utilization protein EutA; PFAM: Asp/Glu/hydantoin racemase; KEGG: rec:RHECIAT_PC0000377 putative arylmalonate decarboxylase protein; ectoine utilization protein EutA 650354..651133 Rhizobium leguminosarum bv. trifolii WSM1325 8007413 YP_002973408.1 CDS eutB NC_012848.1 651138 652139 D catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization; threonine dehydratase 651138..652139 Rhizobium leguminosarum bv. trifolii WSM1325 8007414 YP_002973409.1 CDS Rleg_5241 NC_012848.1 652136 653128 D putative cyclodeaminase; ectoine utilization protein EutC 652136..653128 Rhizobium leguminosarum bv. trifolii WSM1325 8007415 YP_002973410.1 CDS Rleg_5242 NC_012848.1 653161 654342 D TIGRFAM: ectoine utilization protein EutD; PFAM: creatinase; peptidase M24; KEGG: rec:RHECIAT_PC0000374 probable Xaa-Pro dipeptidase protein; ectoine utilization protein EutD 653161..654342 Rhizobium leguminosarum bv. trifolii WSM1325 8007416 YP_002973411.1 CDS Rleg_5243 NC_012848.1 654350 655357 D TIGRFAM: ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: rec:RHECIAT_PC0000373 putative succinylglutamate desuccinylase/aspartoacylase family protein; ectoine utilization protein EutE 654350..655357 Rhizobium leguminosarum bv. trifolii WSM1325 8007417 YP_002973412.1 CDS Rleg_5244 NC_012848.1 655378 657132 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_PC0000372 probable methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(655378..657132) Rhizobium leguminosarum bv. trifolii WSM1325 8007418 YP_002973413.1 CDS Rleg_5245 NC_012848.1 657603 657851 R KEGG: ret:RHE_PF00177 hypothetical protein; hypothetical protein complement(657603..657851) Rhizobium leguminosarum bv. trifolii WSM1325 8007419 YP_002973414.1 CDS Rleg_5246 NC_012848.1 658106 659179 R KEGG: ret:RHE_PF00176 hypothetical protein; hypothetical protein complement(658106..659179) Rhizobium leguminosarum bv. trifolii WSM1325 8007420 YP_002973415.1 CDS Rleg_5247 NC_012848.1 659176 660069 R KEGG: ret:RHE_PF00175 hypothetical protein; hypothetical protein complement(659176..660069) Rhizobium leguminosarum bv. trifolii WSM1325 8007421 YP_002973416.1 CDS Rleg_5248 NC_012848.1 660225 660599 R hypothetical protein complement(660225..660599) Rhizobium leguminosarum bv. trifolii WSM1325 8007422 YP_002973417.1 CDS flgL NC_012848.1 660611 661657 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL complement(660611..661657) Rhizobium leguminosarum bv. trifolii WSM1325 8007423 YP_002973418.1 CDS flgK NC_012848.1 661660 663120 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(661660..663120) Rhizobium leguminosarum bv. trifolii WSM1325 8007424 YP_002973419.1 CDS flgE NC_012848.1 663134 664426 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(663134..664426) Rhizobium leguminosarum bv. trifolii WSM1325 8007425 YP_002973420.1 CDS Rleg_5252 NC_012848.1 664754 665632 R SMART: Calcium-binding EF-hand-containing protein; KEGG: ret:RHE_PF00170 calcium-binding protein; putative signal transduction protein with EFhand domain complement(664754..665632) Rhizobium leguminosarum bv. trifolii WSM1325 8007426 YP_002973421.1 CDS Rleg_5253 NC_012848.1 665796 666443 D PFAM: regulatory protein TetR; KEGG: ret:RHE_PF00169 transcription regulator TetR; TetR family transcriptional regulator 665796..666443 Rhizobium leguminosarum bv. trifolii WSM1325 8007427 YP_002973422.1 CDS Rleg_5254 NC_012848.1 666653 668836 D PFAM: protein of unknown function DUF1217; KEGG: ret:RHE_PF00168 hypothetical protein; hypothetical protein 666653..668836 Rhizobium leguminosarum bv. trifolii WSM1325 8007428 YP_002973423.1 CDS Rleg_5255 NC_012848.1 669089 670846 D KEGG: atc:AGR_L_3430 putative McpA; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 669089..670846 Rhizobium leguminosarum bv. trifolii WSM1325 8007429 YP_002973424.1 CDS Rleg_5256 NC_012848.1 670886 671689 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(670886..671689) Rhizobium leguminosarum bv. trifolii WSM1325 8007430 YP_002973425.1 CDS Rleg_5257 NC_012848.1 671778 672362 D PFAM: regulatory protein TetR; KEGG: msl:Msil_1985 transcriptional regulator, TetR family; TetR family transcriptional regulator 671778..672362 Rhizobium leguminosarum bv. trifolii WSM1325 8007431 YP_002973426.1 CDS Rleg_5258 NC_012848.1 672633 673472 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rec:RHECIAT_PC0000366 probable amino acid ABC transporter, substrate-binding protein; family 3 extracellular solute-binding protein 672633..673472 Rhizobium leguminosarum bv. trifolii WSM1325 8007432 YP_002973427.1 CDS Rleg_5259 NC_012848.1 673590 674252 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00166 amino acid ABC transporter permease; polar amino acid ABC transporter inner membrane subunit 673590..674252 Rhizobium leguminosarum bv. trifolii WSM1325 8007433 YP_002973428.1 CDS Rleg_5260 NC_012848.1 674258 674917 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000364 probable amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 674258..674917 Rhizobium leguminosarum bv. trifolii WSM1325 8007434 YP_002973429.1 CDS Rleg_5261 NC_012848.1 674930 675700 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PF00164 amino acid ABC transporter ATP-binding protein; ABC transporter-like protein 674930..675700 Rhizobium leguminosarum bv. trifolii WSM1325 8007435 YP_002973430.1 CDS Rleg_5262 NC_012848.1 675737 676165 R PFAM: PilT protein domain protein; KEGG: mes:Meso_4581 PilT protein-like; PilT protein domain-containing protein complement(675737..676165) Rhizobium leguminosarum bv. trifolii WSM1325 8007436 YP_002973431.1 CDS Rleg_5263 NC_012848.1 676162 676428 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: mes:Meso_4580 prevent-host-death family protein; prevent-host-death family protein complement(676162..676428) Rhizobium leguminosarum bv. trifolii WSM1325 8007437 YP_002973432.1 CDS Rleg_5265 NC_012848.1 677441 678226 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rec:RHECIAT_PC0000361 probable amino acid ABC transporter, substrate-binding protein; family 3 extracellular solute-binding protein 677441..678226 Rhizobium leguminosarum bv. trifolii WSM1325 8007397 YP_002973433.1 CDS Rleg_5266 NC_012848.1 678306 678977 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00161 amino acid ABC transporter permease; polar amino acid ABC transporter inner membrane subunit 678306..678977 Rhizobium leguminosarum bv. trifolii WSM1325 8007439 YP_002973434.1 CDS Rleg_5267 NC_012848.1 678974 679633 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000360 probable amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 678974..679633 Rhizobium leguminosarum bv. trifolii WSM1325 8007440 YP_002973435.1 CDS Rleg_5268 NC_012848.1 679611 680336 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000359 probable amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 679611..680336 Rhizobium leguminosarum bv. trifolii WSM1325 8007441 YP_002973436.1 CDS Rleg_5269 NC_012848.1 680544 680978 R PFAM: plasmid stabilization system; KEGG: rec:RHECIAT_PC0000823 probable plasmid stabilization protein; plasmid stabilization system complement(680544..680978) Rhizobium leguminosarum bv. trifolii WSM1325 8007442 YP_002973437.1 CDS Rleg_5270 NC_012848.1 680978 681235 R KEGG: gdj:Gdia_1735 putative addiction module antidote protein, CopG/Arc/MetJ family; CopG/Arc/MetJ family putative addiction module antidote protein complement(680978..681235) Rhizobium leguminosarum bv. trifolii WSM1325 8007443 YP_002973438.1 CDS Rleg_5271 NC_012848.1 681345 681851 R PFAM: RES domain protein; KEGG: sme:SM_b20695 hypothetical protein; RES domain-containing protein complement(681345..681851) Rhizobium leguminosarum bv. trifolii WSM1325 8007444 YP_002973439.1 CDS Rleg_5272 NC_012848.1 681848 682333 R KEGG: sme:SM_b20696 hypothetical protein; hypothetical protein complement(681848..682333) Rhizobium leguminosarum bv. trifolii WSM1325 8007445 YP_002973440.1 CDS Rleg_5273 NC_012848.1 682604 683338 R PFAM: PspA/IM30 family protein; KEGG: rec:RHECIAT_PC0000357 probable negative regulator protein PspA family (suppresses sigma54-dependent transcription); phage shock protein PspA complement(682604..683338) Rhizobium leguminosarum bv. trifolii WSM1325 8007446 YP_002973441.1 CDS Rleg_5274 NC_012848.1 683335 683769 R KEGG: rec:RHECIAT_PC0000356 hypothetical protein; hypothetical protein complement(683335..683769) Rhizobium leguminosarum bv. trifolii WSM1325 8007447 YP_002973442.1 CDS Rleg_5275 NC_012848.1 683906 684940 D PFAM: Ion transport 2 domain protein; KEGG: rec:RHECIAT_PC0000355 putative cation transporter (potassium channel) protein; Ion transport 2 domain-containing protein 683906..684940 Rhizobium leguminosarum bv. trifolii WSM1325 8007448 YP_002973443.1 CDS Rleg_5276 NC_012848.1 684937 685593 D KEGG: rec:RHECIAT_PC0000354 hypothetical protein; hypothetical protein 684937..685593 Rhizobium leguminosarum bv. trifolii WSM1325 8007449 YP_002973444.1 CDS Rleg_5277 NC_012848.1 685629 686030 D PFAM: protein of unknown function DUF350; KEGG: rec:RHECIAT_PC0000353 hypothetical protein; hypothetical protein 685629..686030 Rhizobium leguminosarum bv. trifolii WSM1325 8007450 YP_002973445.1 CDS Rleg_5278 NC_012848.1 686043 686639 D PFAM: protein of unknown function DUF1190; KEGG: rec:RHECIAT_PC0000352 hypothetical protein; hypothetical protein 686043..686639 Rhizobium leguminosarum bv. trifolii WSM1325 8007451 YP_002973446.1 CDS Rleg_5279 NC_012848.1 686641 687798 D PFAM: glutathionylspermidine synthase; KEGG: rec:RHECIAT_PC0000351 putative glutathionylspermidine synthetase protein; glutathionylspermidine synthase 686641..687798 Rhizobium leguminosarum bv. trifolii WSM1325 8007452 YP_002973447.1 CDS Rleg_5280 NC_012848.1 688079 688915 D KEGG: ret:RHE_PD00189 hypothetical protein; hypothetical protein 688079..688915 Rhizobium leguminosarum bv. trifolii WSM1325 8007453 YP_002973448.1 CDS Rleg_5281 NC_012848.1 688922 689173 R KEGG: ret:RHE_PD00190 putative insertion sequence transposase protein; hypothetical protein complement(688922..689173) Rhizobium leguminosarum bv. trifolii WSM1325 8007454 YP_002973449.1 CDS Rleg_5282 NC_012848.1 689482 690855 R PFAM: Integrase catalytic region; KEGG: smd:Smed_4886 integrase catalytic region; Integrase catalytic region complement(689482..690855) Rhizobium leguminosarum bv. trifolii WSM1325 8007455 YP_002973450.1 CDS Rleg_5283 NC_012848.1 691166 691903 D KEGG: ret:RHE_PD00189 hypothetical protein; hypothetical protein 691166..691903 Rhizobium leguminosarum bv. trifolii WSM1325 8007456 YP_002973451.1 CDS Rleg_5284 NC_012848.1 691910 693334 R PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00190 putative insertion sequence transposase protein; Integrase catalytic region complement(691910..693334) Rhizobium leguminosarum bv. trifolii WSM1325 8007457 YP_002973452.1 CDS Rleg_5285 NC_012848.1 693609 694772 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: hypothetical protein; Mandelate racemase/muconate lactonizing protein complement(693609..694772) Rhizobium leguminosarum bv. trifolii WSM1325 8007458 YP_002973453.1 CDS Rleg_5286 NC_012848.1 694861 695175 D hypothetical protein 694861..695175 Rhizobium leguminosarum bv. trifolii WSM1325 8007459 YP_002973454.1 CDS Rleg_5287 NC_012848.1 695189 696106 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator 695189..696106 Rhizobium leguminosarum bv. trifolii WSM1325 8007460 YP_002973455.1 CDS Rleg_5288 NC_012848.1 696297 696665 R PFAM: helix-turn-helix HxlR type; KEGG: eca:ECA2934 putative transcriptional regulator; HxlR family transcriptional regulator complement(696297..696665) Rhizobium leguminosarum bv. trifolii WSM1325 8007461 YP_002973456.1 CDS Rleg_5289 NC_012848.1 696766 697512 D PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bcm:Bcenmc03_2497 NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent 696766..697512 Rhizobium leguminosarum bv. trifolii WSM1325 8007462 YP_002973457.1 CDS Rleg_5290 NC_012848.1 697677 698669 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_CH02362 LacI family transcription regulator; LacI family transcriptional regulator complement(697677..698669) Rhizobium leguminosarum bv. trifolii WSM1325 8007463 YP_002973458.1 CDS Rleg_5292 NC_012848.1 699962 701083 D PFAM: inner-membrane translocator; KEGG: sugar ABC transporter; inner-membrane translocator 699962..701083 Rhizobium leguminosarum bv. trifolii WSM1325 8007398 YP_002973459.1 CDS Rleg_5293 NC_012848.1 701086 701886 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sugar ABC transporter; ABC transporter-like protein 701086..701886 Rhizobium leguminosarum bv. trifolii WSM1325 8007465 YP_002973460.1 CDS Rleg_5294 NC_012848.1 701908 702705 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: hydroxypyruvate isomerase protein ; K01816 hydroxypyruvate isomerase; xylose isomerase domain-containing protein 701908..702705 Rhizobium leguminosarum bv. trifolii WSM1325 8007466 YP_002973461.1 CDS Rleg_5295 NC_012848.1 702735 703757 D PFAM: oxidoreductase domain protein; CoA-binding domain protein; Oxidoreductase domain; KEGG: mlo:mll1000 dehydrogenase; oxidoreductase domain-containing protein 702735..703757 Rhizobium leguminosarum bv. trifolii WSM1325 8007467 YP_002973462.1 CDS Rleg_5296 NC_012848.1 703790 704116 D KEGG: hypothetical protein; putative RpiR family transcriptional regulator 703790..704116 Rhizobium leguminosarum bv. trifolii WSM1325 8007468 YP_002973463.1 CDS Rleg_5297 NC_012848.1 704430 704723 R PFAM: plasmid stabilization system; KEGG: hypothetical protein; plasmid stabilization system complement(704430..704723) Rhizobium leguminosarum bv. trifolii WSM1325 8006934 YP_002973464.1 CDS Rleg_5298 NC_012848.1 704723 704977 R TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: hypothetical protein; CopG/Arc/MetJ family putative addiction module antidote protein complement(704723..704977) Rhizobium leguminosarum bv. trifolii WSM1325 8006935 YP_002973465.1 CDS Rleg_5299 NC_012848.1 705025 705315 R KEGG: cti:RALTA_A1335 putative prolyl aminopeptidase, LuxR DNA binding domain C_term; hypothetical protein complement(705025..705315) Rhizobium leguminosarum bv. trifolii WSM1325 8006936 YP_002973466.1 CDS Rleg_5300 NC_012848.1 705453 706637 D PFAM: major facilitator superfamily MFS_1; KEGG: lch:Lcho_4332 major facilitator transporter; major facilitator superfamily protein 705453..706637 Rhizobium leguminosarum bv. trifolii WSM1325 8006937 YP_002973467.1 CDS Rleg_5301 NC_012848.1 707081 707257 D KEGG: hypothetical protein; hypothetical protein 707081..707257 Rhizobium leguminosarum bv. trifolii WSM1325 8006938 YP_002973468.1 CDS Rleg_5302 NC_012848.1 707292 708344 D PFAM: GTPase EngC; KEGG: hypothetical protein ; K06949 ribosome biogenesis GTPase; GTPase EngC 707292..708344 Rhizobium leguminosarum bv. trifolii WSM1325 8006939 YP_002973469.1 CDS Rleg_5303 NC_012848.1 708431 708679 R hypothetical protein complement(708431..708679) Rhizobium leguminosarum bv. trifolii WSM1325 8006940 YP_002973470.1 CDS Rleg_5304 NC_012848.1 709050 709298 D hypothetical protein 709050..709298 Rhizobium leguminosarum bv. trifolii WSM1325 8006941 YP_002973471.1 CDS Rleg_5305 NC_012848.1 709298 709825 D KEGG: rce:RC1_1703 glycerol metabolism activator AgmR; response regulator receiver protein 709298..709825 Rhizobium leguminosarum bv. trifolii WSM1325 8006942 YP_002973472.1 CDS Rleg_5306 NC_012848.1 709972 711201 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bid:Bind_1769 amine oxidase; amine oxidase complement(709972..711201) Rhizobium leguminosarum bv. trifolii WSM1325 8006943 YP_002973473.1 CDS Rleg_5307 NC_012848.1 711302 712843 D PFAM: sodium/hydrogen exchanger; KEGG: ret:RHE_CH03359 Na+/H+ antiporter protein; sodium/hydrogen exchanger 711302..712843 Rhizobium leguminosarum bv. trifolii WSM1325 8006944 YP_002973474.1 CDS Rleg_5308 NC_012848.1 712922 713980 R PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: sme:SM_b20483 putative catabolite repressor protein; LacI family transcriptional regulator complement(712922..713980) Rhizobium leguminosarum bv. trifolii WSM1325 8006945 YP_002973475.1 CDS Rleg_5309 NC_012848.1 714122 714214 D hypothetical protein 714122..714214 Rhizobium leguminosarum bv. trifolii WSM1325 8006946 YP_002973476.1 CDS Rleg_5310 NC_012848.1 714227 715210 D KEGG: smd:Smed_3639 putative ABC transporter periplasmic sugar-binding protein; putative ABC transporter periplasmic sugar-binding protein 714227..715210 Rhizobium leguminosarum bv. trifolii WSM1325 8006947 YP_002973477.1 CDS Rleg_5311 NC_012848.1 715338 716852 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SM_b20485 putative sugar ABC transporter ATP-binding protein; ABC transporter-like protein 715338..716852 Rhizobium leguminosarum bv. trifolii WSM1325 8006948 YP_002973478.1 CDS Rleg_5312 NC_012848.1 716845 717873 D PFAM: inner-membrane translocator; KEGG: sme:SM_b20486 putative sugar ABC transporter permease protein; inner-membrane translocator 716845..717873 Rhizobium leguminosarum bv. trifolii WSM1325 8006949 YP_002973479.1 CDS Rleg_5313 NC_012848.1 717873 718859 D PFAM: inner-membrane translocator; KEGG: smd:Smed_3636 inner-membrane translocator; inner-membrane translocator 717873..718859 Rhizobium leguminosarum bv. trifolii WSM1325 8006950 YP_002973480.1 CDS Rleg_5314 NC_012848.1 718871 719719 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SM_b20488 hypothetical protein; xylose isomerase domain-containing protein 718871..719719 Rhizobium leguminosarum bv. trifolii WSM1325 8006951 YP_002973481.1 CDS Rleg_5315 NC_012848.1 720100 721164 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 720100..721164 Rhizobium leguminosarum bv. trifolii WSM1325 8006952 YP_002973482.1 CDS Rleg_5316 NC_012848.1 721172 722917 R PFAM: FAD dependent oxidoreductase; KEGG: glycerol-3-phosphate dehydrogenase protein ; K00111 glycerol-3-phosphate dehydrogenase; Glycerol-3-phosphate dehydrogenase complement(721172..722917) Rhizobium leguminosarum bv. trifolii WSM1325 8006953 YP_002973483.1 CDS Rleg_5317 NC_012848.1 722961 724490 R PFAM: carbohydrate kinase FGGY; KEGG: lyxX; L-xylulose kinase protein ; K00880 L-xylulokinase; carbohydrate kinase FGGY complement(722961..724490) Rhizobium leguminosarum bv. trifolii WSM1325 8006954 YP_002973484.1 CDS Rleg_5318 NC_012848.1 724528 725370 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: transcriptional regulator protein; DeoR family transcriptional regulator complement(724528..725370) Rhizobium leguminosarum bv. trifolii WSM1325 8006955 YP_002973485.1 CDS Rleg_5319 NC_012848.1 725521 726468 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ribose ABC transporter ; K10439 ribose transport system substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(725521..726468) Rhizobium leguminosarum bv. trifolii WSM1325 8006956 YP_002973486.1 CDS Rleg_5320 NC_012848.1 726580 727632 R PFAM: inner-membrane translocator; KEGG: ribose ABC transporter ; K10440 ribose transport system permease protein; inner-membrane translocator complement(726580..727632) Rhizobium leguminosarum bv. trifolii WSM1325 8006957 YP_002973487.1 CDS Rleg_5321 NC_012848.1 727655 729199 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ribose ABC transporter ; K10441 ribose transport system ATP-binding protein; ABC transporter-like protein complement(727655..729199) Rhizobium leguminosarum bv. trifolii WSM1325 8006958 YP_002973488.1 CDS Rleg_5322 NC_012848.1 729196 729852 R KEGG: hypothetical protein; hypothetical protein complement(729196..729852) Rhizobium leguminosarum bv. trifolii WSM1325 8007282 YP_002973489.1 CDS Rleg_5323 NC_012848.1 730643 732223 D PFAM: carbohydrate kinase FGGY; KEGG: lyxX; L-xylulose kinase protein; carbohydrate kinase FGGY 730643..732223 Rhizobium leguminosarum bv. trifolii WSM1325 8007283 YP_002973490.1 CDS Rleg_5324 NC_012848.1 732250 733761 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 732250..733761 Rhizobium leguminosarum bv. trifolii WSM1325 8007284 YP_002973491.1 CDS Rleg_5325 NC_012848.1 733773 734705 D KEGG: D-erythrulose 4-phosphate dehydrogenase; D-erythrulose 4-phosphate dehydrogenase 733773..734705 Rhizobium leguminosarum bv. trifolii WSM1325 8007285 YP_002973492.1 CDS Rleg_5326 NC_012848.1 734776 735711 D PFAM: putative sugar-binding domain protein; KEGG: smoC; sorbitol/mannitol operon transcriptional regulator protein; DeoR family transcriptional regulator 734776..735711 Rhizobium leguminosarum bv. trifolii WSM1325 8007286 YP_002973493.1 CDS Rleg_5327 NC_012848.1 735813 736589 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: glpRb; glycerol-3-phosphate transcriptional regulator protein; DeoR family transcriptional regulator 735813..736589 Rhizobium leguminosarum bv. trifolii WSM1325 8007287 YP_002973494.1 CDS tpiA NC_012848.1 736586 737356 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 736586..737356 Rhizobium leguminosarum bv. trifolii WSM1325 8007288 YP_002973495.1 CDS Rleg_5329 NC_012848.1 737368 737823 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 737368..737823 Rhizobium leguminosarum bv. trifolii WSM1325 8007289 YP_002973496.1 CDS Rleg_5331 NC_012848.1 738176 739216 D TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: rec:RHECIAT_PA0000196 putative ATP-dependent DNA ligase protein; DNA polymerase LigD, ligase domain-containing protein 738176..739216 Rhizobium leguminosarum bv. trifolii WSM1325 8007399 YP_002973497.1 CDS Rleg_5333 NC_012848.1 739585 739818 D KEGG: hypothetical protein; hypothetical protein 739585..739818 Rhizobium leguminosarum bv. trifolii WSM1325 8007400 YP_002973498.1 CDS Rleg_5334 NC_012848.1 739859 740254 D KEGG: hypothetical protein; hypothetical protein 739859..740254 Rhizobium leguminosarum bv. trifolii WSM1325 8007292 YP_002973499.1 CDS Rleg_5335 NC_012848.1 740346 741245 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00093 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(740346..741245) Rhizobium leguminosarum bv. trifolii WSM1325 8007293 YP_002973500.1 CDS Rleg_5336 NC_012848.1 741258 742190 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000120 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(741258..742190) Rhizobium leguminosarum bv. trifolii WSM1325 8007294 YP_002973501.1 CDS Rleg_5337 NC_012848.1 742275 743579 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_PC0000119 probable sugar ABC transporter, substrate-binding protein; family 1 extracellular solute-binding protein complement(742275..743579) Rhizobium leguminosarum bv. trifolii WSM1325 8007295 YP_002973502.1 CDS Rleg_5338 NC_012848.1 743730 744797 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00090 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein complement(743730..744797) Rhizobium leguminosarum bv. trifolii WSM1325 8007296 YP_002973503.1 CDS Rleg_5339 NC_012848.1 744952 745938 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; KEGG: UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase complement(744952..745938) Rhizobium leguminosarum bv. trifolii WSM1325 8007297 YP_002973504.1 CDS Rleg_5340 NC_012848.1 745960 746685 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator protein; GntR domain-containing protein complement(745960..746685) Rhizobium leguminosarum bv. trifolii WSM1325 8007298 YP_002973505.1 CDS ligD NC_012848.1 746891 749536 R catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase complement(746891..749536) Rhizobium leguminosarum bv. trifolii WSM1325 8007299 YP_002973506.1 CDS Rleg_5342 NC_012848.1 749714 751480 D PFAM: TrkA-C domain protein; Citrate transporter; KEGG: oan:Oant_3754 TrkA-C domain protein; TrkA-C domain-containing protein 749714..751480 Rhizobium leguminosarum bv. trifolii WSM1325 8007300 YP_002973507.1 CDS Rleg_5343 NC_012848.1 751542 752603 R PFAM: Malate/L-lactate dehydrogenase; KEGG: bbr:BB4684 putative malate/L-lactate dehydrogenase; Malate/L-lactate dehydrogenase complement(751542..752603) Rhizobium leguminosarum bv. trifolii WSM1325 8007301 YP_002973508.1 CDS Rleg_5344 NC_012848.1 752674 754194 R PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_pAT_98 chain A, dipeptide binding protein complex with glycyl-L-leucine; family 5 extracellular solute-binding protein complement(752674..754194) Rhizobium leguminosarum bv. trifolii WSM1325 8007302 YP_002973509.1 CDS Rleg_5345 NC_012848.1 754381 755286 R PFAM: dihydrodipicolinate synthetase; KEGG: rsp:RSP_3655 5-dehydro-4-deoxyglucarate dehydratase; 5-dehydro-4-deoxyglucarate dehydratase complement(754381..755286) Rhizobium leguminosarum bv. trifolii WSM1325 8007303 YP_002973510.1 CDS Rleg_5346 NC_012848.1 755304 756821 R PFAM: Aldehyde Dehydrogenase; KEGG: sme:SM_b20262 putative semialdehyde dehydrogenase protein; aldehyde dehydrogenase complement(755304..756821) Rhizobium leguminosarum bv. trifolii WSM1325 8007304 YP_002973511.1 CDS Rleg_5347 NC_012848.1 757002 757712 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: ret:RHE_PC00045 hypothetical protein; hypothetical protein complement(757002..757712) Rhizobium leguminosarum bv. trifolii WSM1325 8007305 YP_002973512.1 CDS Rleg_5348 NC_012848.1 757733 758923 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: reu:Reut_B4643 mandelate racemase/muconate lactonizing protein; Mandelate racemase/muconate lactonizing protein complement(757733..758923) Rhizobium leguminosarum bv. trifolii WSM1325 8007306 YP_002973513.1 CDS Rleg_5349 NC_012848.1 758933 760669 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(758933..760669) Rhizobium leguminosarum bv. trifolii WSM1325 8007307 YP_002973514.1 CDS Rleg_5350 NC_012848.1 760813 761532 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: azc:AZC_2647 transcriptional regulatory protein; GntR family transcriptional regulator 760813..761532 Rhizobium leguminosarum bv. trifolii WSM1325 8007308 YP_002973515.1 CDS Rleg_5351 NC_012848.1 761559 762506 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mpo:Mpop_4878 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(761559..762506) Rhizobium leguminosarum bv. trifolii WSM1325 8007309 YP_002973516.1 CDS Rleg_5352 NC_012848.1 762503 764137 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SM_b20141 putative oligopeptide ABC transporter ATP-binding protein; ABC transporter-like protein complement(762503..764137) Rhizobium leguminosarum bv. trifolii WSM1325 8007310 YP_002973517.1 CDS Rleg_5353 NC_012848.1 764130 765050 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20142 putative oligopeptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component complement(764130..765050) Rhizobium leguminosarum bv. trifolii WSM1325 8007311 YP_002973518.1 CDS Rleg_5354 NC_012848.1 765060 765974 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20143 putative oligopeptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component complement(765060..765974) Rhizobium leguminosarum bv. trifolii WSM1325 8007312 YP_002973519.1 CDS Rleg_5355 NC_012848.1 766142 767008 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SM_b20112 hypothetical protein; hypothetical protein complement(766142..767008) Rhizobium leguminosarum bv. trifolii WSM1325 8007313 YP_002973520.1 CDS Rleg_5356 NC_012848.1 767282 767740 R KEGG: smd:Smed_4426 hypothetical protein; hypothetical protein complement(767282..767740) Rhizobium leguminosarum bv. trifolii WSM1325 8007314 YP_002973521.1 CDS Rleg_5357 NC_012848.1 767737 768201 R PFAM: NUDIX hydrolase; KEGG: ret:RHE_PF00086 putative NTP pyrophosphohydrolase protein; NUDIX hydrolase complement(767737..768201) Rhizobium leguminosarum bv. trifolii WSM1325 8007315 YP_002973522.1 CDS Rleg_5358 NC_012848.1 768226 768393 R KEGG: rec:RHECIAT_PC0000134 hypothetical protein; hypothetical protein complement(768226..768393) Rhizobium leguminosarum bv. trifolii WSM1325 8007316 YP_002973523.1 CDS Rleg_5359 NC_012848.1 768629 769309 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rec:RHECIAT_CH0002612 hypothetical protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 768629..769309 Rhizobium leguminosarum bv. trifolii WSM1325 8007317 YP_002973524.1 CDS Rleg_5360 NC_012848.1 769364 770434 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: azc:AZC_4208 ABC transporter ATP-binding protein; ABC transporter-like protein complement(769364..770434) Rhizobium leguminosarum bv. trifolii WSM1325 8007318 YP_002973525.1 CDS Rleg_5361 NC_012848.1 770502 771800 R TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: sme:SM_b21373 putative sugar kinase protein; D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit complement(770502..771800) Rhizobium leguminosarum bv. trifolii WSM1325 8007319 YP_002973526.1 CDS Rleg_5362 NC_012848.1 771797 772750 R PFAM: sugar isomerase (SIS); KEGG: aeh:Mlg_2865 glutamine--fructose-6-phosphate transaminase; sugar isomerase (SIS) complement(771797..772750) Rhizobium leguminosarum bv. trifolii WSM1325 8007320 YP_002973527.1 CDS Rleg_5363 NC_012848.1 772762 773619 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(772762..773619) Rhizobium leguminosarum bv. trifolii WSM1325 8007321 YP_002973528.1 CDS Rleg_5364 NC_012848.1 773619 774536 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2296 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(773619..774536) Rhizobium leguminosarum bv. trifolii WSM1325 8007322 YP_002973529.1 CDS Rleg_5365 NC_012848.1 774533 775789 R PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4557 extracellular solute-binding protein family 1; family 1 extracellular solute-binding protein complement(774533..775789) Rhizobium leguminosarum bv. trifolii WSM1325 8007323 YP_002973530.1 CDS Rleg_5366 NC_012848.1 775821 776780 R PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: gox:GOX1475 putative N-acetylglucosamine kinase; BadF/BadG/BcrA/BcrD type ATPase complement(775821..776780) Rhizobium leguminosarum bv. trifolii WSM1325 8007324 YP_002973531.1 CDS Rleg_5367 NC_012848.1 776777 777571 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: sml:Smlt4437 putative aga operon DeoR family transcriptional repressor; DeoR family transcriptional regulator complement(776777..777571) Rhizobium leguminosarum bv. trifolii WSM1325 8007325 YP_002973532.1 CDS Rleg_5368 NC_012848.1 777760 779076 R PFAM: glycoside hydrolase family 4; KEGG: pla:Plav_1937 glycoside hydrolase family protein; glycoside hydrolase family protein complement(777760..779076) Rhizobium leguminosarum bv. trifolii WSM1325 8007326 YP_002973533.1 CDS Rleg_5369 NC_012848.1 779173 780039 D PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_2451 transcriptional regulator, AraC family; AraC family transcriptional regulator 779173..780039 Rhizobium leguminosarum bv. trifolii WSM1325 8007327 YP_002973534.1 CDS Rleg_5370 NC_012848.1 780162 780833 R PFAM: flavin reductase domain protein FMN-binding; KEGG: flavin reductase protein; flavin reductase domain-containing protein complement(780162..780833) Rhizobium leguminosarum bv. trifolii WSM1325 8007328 YP_002973535.1 CDS Rleg_5371 NC_012848.1 780835 782259 R PFAM: peptidase M24; KEGG: map1; methionine aminopeptidase protein; peptidase M24 complement(780835..782259) Rhizobium leguminosarum bv. trifolii WSM1325 8007329 YP_002973536.1 CDS Rleg_5372 NC_012848.1 782304 783125 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: potC; spermidine/putrescine ABC transporter; binding-protein-dependent transport systems inner membrane component complement(782304..783125) Rhizobium leguminosarum bv. trifolii WSM1325 8007330 YP_002973537.1 CDS Rleg_5373 NC_012848.1 783118 783945 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: polyamine ABC transporter; binding-protein-dependent transport systems inner membrane component complement(783118..783945) Rhizobium leguminosarum bv. trifolii WSM1325 8007331 YP_002973538.1 CDS Rleg_5374 NC_012848.1 783955 784995 R PFAM: extracellular solute-binding protein family 1; KEGG: ABC transporter, substrate binding protein; family 1 extracellular solute-binding protein complement(783955..784995) Rhizobium leguminosarum bv. trifolii WSM1325 8007332 YP_002973539.1 CDS Rleg_5375 NC_012848.1 785001 786164 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ABC transporter; ABC transporter-like protein complement(785001..786164) Rhizobium leguminosarum bv. trifolii WSM1325 8007333 YP_002973540.1 CDS Rleg_5376 NC_012848.1 786741 787673 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: amino acid ABC transporter; family 3 extracellular solute-binding protein 786741..787673 Rhizobium leguminosarum bv. trifolii WSM1325 8007334 YP_002973541.1 CDS Rleg_5377 NC_012848.1 787739 788569 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amino acid ABC transporter; polar amino acid ABC transporter inner membrane subunit 787739..788569 Rhizobium leguminosarum bv. trifolii WSM1325 8007335 YP_002973542.1 CDS Rleg_5378 NC_012848.1 788638 789768 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: hypothetical protein; xylose isomerase domain-containing protein 788638..789768 Rhizobium leguminosarum bv. trifolii WSM1325 8007336 YP_002973543.1 CDS Rleg_5379 NC_012848.1 789927 790685 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator protein; GntR family transcriptional regulator 789927..790685 Rhizobium leguminosarum bv. trifolii WSM1325 8007337 YP_002973544.1 CDS Rleg_5380 NC_012848.1 790841 791800 R KEGG: psa:PST_0152 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(790841..791800) Rhizobium leguminosarum bv. trifolii WSM1325 8007338 YP_002973545.1 CDS Rleg_5381 NC_012848.1 791885 793699 R KEGG: GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(791885..793699) Rhizobium leguminosarum bv. trifolii WSM1325 8007339 YP_002973546.1 CDS Rleg_5382 NC_012848.1 794060 795595 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: ATP-binding region ATPase domain protein; KEGG: rpc:RPC_3862 signal transduction histidine kinase; signal transduction histidine kinase 794060..795595 Rhizobium leguminosarum bv. trifolii WSM1325 8007340 YP_002973547.1 CDS Rleg_5383 NC_012848.1 795762 796085 D KEGG: aba:Acid345_4767 antibiotic biosynthesis monooxygenase domain protein; hypothetical protein 795762..796085 Rhizobium leguminosarum bv. trifolii WSM1325 8007341 YP_002973548.1 CDS Rleg_5384 NC_012848.1 796232 797242 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: aglR; transcriptional regulator protein ; K02529 LacI family transcriptional regulator; LacI family transcriptional regulator 796232..797242 Rhizobium leguminosarum bv. trifolii WSM1325 8007342 YP_002973549.1 CDS Rleg_5385 NC_012848.1 797285 798559 D PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein; family 1 extracellular solute-binding protein 797285..798559 Rhizobium leguminosarum bv. trifolii WSM1325 8007343 YP_002973550.1 CDS Rleg_5386 NC_012848.1 798632 799483 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter ; K02025 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component 798632..799483 Rhizobium leguminosarum bv. trifolii WSM1325 8007344 YP_002973551.1 CDS Rleg_5387 NC_012848.1 799480 800337 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter ; K02026 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component 799480..800337 Rhizobium leguminosarum bv. trifolii WSM1325 8007345 YP_002973552.1 CDS Rleg_5388 NC_012848.1 800351 801409 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sugar ABC transporter; ABC transporter-like protein 800351..801409 Rhizobium leguminosarum bv. trifolii WSM1325 8007346 YP_002973553.1 CDS Rleg_5389 NC_012848.1 801429 802697 D KEGG: hypothetical protein; hypothetical protein 801429..802697 Rhizobium leguminosarum bv. trifolii WSM1325 8007347 YP_002973554.1 CDS Rleg_5390 NC_012848.1 802821 803096 D KEGG: cti:RALTA_A0065 antitoxin of a toxin/antitoxin system; putative CopG/Arc/MetJ family transcriptional regulator 802821..803096 Rhizobium leguminosarum bv. trifolii WSM1325 8007348 YP_002973555.1 CDS Rleg_5391 NC_012848.1 803211 805838 R PFAM: SMC domain protein; KEGG: nwi:Nwi_0907 hypothetical protein; SMC domain-containing protein complement(803211..805838) Rhizobium leguminosarum bv. trifolii WSM1325 8007349 YP_002973556.1 CDS Rleg_5392 NC_012848.1 805835 806959 R PFAM: metallophosphoesterase; KEGG: nwi:Nwi_0908 exonuclease SbcD; metallophosphoesterase complement(805835..806959) Rhizobium leguminosarum bv. trifolii WSM1325 8007350 YP_002973557.1 CDS Rleg_5393 NC_012848.1 807267 808658 R PFAM: Aldehyde Dehydrogenase; KEGG: pla:Plav_2376 aldehyde dehydrogenase; aldehyde dehydrogenase complement(807267..808658) Rhizobium leguminosarum bv. trifolii WSM1325 8007351 YP_002973558.1 CDS Rleg_5394 NC_012848.1 808660 810306 R catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase complement(808660..810306) Rhizobium leguminosarum bv. trifolii WSM1325 8007352 YP_002973559.1 CDS Rleg_5395 NC_012848.1 810402 811280 R KEGG: ret:RHE_PF00477 hypothetical protein; hypothetical protein complement(810402..811280) Rhizobium leguminosarum bv. trifolii WSM1325 8007353 YP_002973560.1 CDS Rleg_5396 NC_012848.1 811708 812430 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: bpy:Bphyt_4892 dimethylmenaquinone methyltransferase; Dimethylmenaquinone methyltransferase complement(811708..812430) Rhizobium leguminosarum bv. trifolii WSM1325 8007354 YP_002973561.1 CDS Rleg_5397 NC_012848.1 812501 813286 R PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet0874 IclR family transcriptional regulator; IclR family transcriptional regulator complement(812501..813286) Rhizobium leguminosarum bv. trifolii WSM1325 8007355 YP_002973562.1 CDS Rleg_5398 NC_012848.1 813501 815021 D PFAM: extracellular solute-binding protein family 5; KEGG: oca:OCAR_6076 ABC transporter; family 5 extracellular solute-binding protein 813501..815021 Rhizobium leguminosarum bv. trifolii WSM1325 8007356 YP_002973563.1 CDS Rleg_5399 NC_012848.1 815062 815982 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_5079 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 815062..815982 Rhizobium leguminosarum bv. trifolii WSM1325 8007357 YP_002973564.1 CDS Rleg_5400 NC_012848.1 815979 816896 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_3987 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 815979..816896 Rhizobium leguminosarum bv. trifolii WSM1325 8007358 YP_002973565.1 CDS Rleg_5401 NC_012848.1 816896 817867 D KEGG: bce:BC1182 oligopeptide transport ATP-binding protein OppD; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 816896..817867 Rhizobium leguminosarum bv. trifolii WSM1325 8007359 YP_002973566.1 CDS Rleg_5402 NC_012848.1 817864 818880 D KEGG: bav:BAV0997 oligopeptide ABC transporter,ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 817864..818880 Rhizobium leguminosarum bv. trifolii WSM1325 8007360 YP_002973567.1 CDS Rleg_5403 NC_012848.1 818954 821071 R KEGG: rec:RHECIAT_PA0000112 putative C-terminal processing peptidase protein; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(818954..821071) Rhizobium leguminosarum bv. trifolii WSM1325 8007361 YP_002973568.1 CDS Rleg_5404 NC_012848.1 821220 821699 R PFAM: MEKHLA domain protein; KEGG: hypothetical protein; MEKHLA domain-containing protein complement(821220..821699) Rhizobium leguminosarum bv. trifolii WSM1325 8007362 YP_002973569.1 CDS Rleg_5405 NC_012848.1 821818 823008 R TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: hippurate hydrolase protein; amidohydrolase complement(821818..823008) Rhizobium leguminosarum bv. trifolii WSM1325 8007363 YP_002973570.1 CDS Rleg_5406 NC_012848.1 823080 823859 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amino acid ABC transporter; ABC transporter-like protein complement(823080..823859) Rhizobium leguminosarum bv. trifolii WSM1325 8007364 YP_002973571.1 CDS Rleg_5407 NC_012848.1 823856 824785 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amino acid ABC transporter; polar amino acid ABC transporter inner membrane subunit complement(823856..824785) Rhizobium leguminosarum bv. trifolii WSM1325 8007365 YP_002973572.1 CDS Rleg_5408 NC_012848.1 824782 825672 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: amino acid ABC transporter; family 3 extracellular solute-binding protein complement(824782..825672) Rhizobium leguminosarum bv. trifolii WSM1325 8007366 YP_002973573.1 CDS Rleg_5409 NC_012848.1 825748 826710 R KEGG: hypothetical protein; hypothetical protein complement(825748..826710) Rhizobium leguminosarum bv. trifolii WSM1325 8007367 YP_002973574.1 CDS Rleg_5410 NC_012848.1 826809 828134 D PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator protein; GntR family transcriptional regulator with aminotransferase domain 826809..828134 Rhizobium leguminosarum bv. trifolii WSM1325 8007368 YP_002973575.1 CDS Rleg_5411 NC_012848.1 828189 828911 R PFAM: response regulator receiver; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ret:RHE_PF00479 two-component response regulator protein; LuxR family two component transcriptional regulator complement(828189..828911) Rhizobium leguminosarum bv. trifolii WSM1325 8007369 YP_002973852.1 CDS dnaA NC_012850.1 55 1605 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 55..1605 Rhizobium leguminosarum bv. trifolii WSM1325 8015384 YP_002973853.1 CDS Rleg_0002 NC_012850.1 1743 2825 D PFAM: saccharopine dehydrogenase; KEGG: rec:RHECIAT_CH0000398 probable saccharopine dehydrogenase protein (NAD(+), L-lysine-forming); saccharopine dehydrogenase 1743..2825 Rhizobium leguminosarum bv. trifolii WSM1325 8011254 YP_002973854.1 CDS Rleg_0003 NC_012850.1 2893 4095 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(2893..4095) Rhizobium leguminosarum bv. trifolii WSM1325 8011255 YP_002973855.1 CDS Rleg_0004 NC_012850.1 4105 4749 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(4105..4749) Rhizobium leguminosarum bv. trifolii WSM1325 8015385 YP_002973856.1 CDS Rleg_0005 NC_012850.1 4750 5166 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH00362 lactoylglutathione lyase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(4750..5166) Rhizobium leguminosarum bv. trifolii WSM1325 8011256 YP_002973857.1 CDS rph NC_012850.1 5172 5891 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(5172..5891) Rhizobium leguminosarum bv. trifolii WSM1325 8015386 YP_002973858.1 CDS hrcA NC_012850.1 6020 7108 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 6020..7108 Rhizobium leguminosarum bv. trifolii WSM1325 8011257 YP_002973859.1 CDS Rleg_0008 NC_012850.1 7220 7852 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 7220..7852 Rhizobium leguminosarum bv. trifolii WSM1325 8011258 YP_002973860.1 CDS Rleg_0009 NC_012850.1 7917 8861 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rec:RHECIAT_CH0000405 inosine-adenosine-guanosine preferring nucleoside hydrolase protein; inosine/uridine-preferring nucleoside hydrolase complement(7917..8861) Rhizobium leguminosarum bv. trifolii WSM1325 8011259 YP_002973861.1 CDS Rleg_0010 NC_012850.1 9139 9564 D PFAM: heat shock protein Hsp20; KEGG: ret:RHE_CH00367 molecular chaperone small heat shock protein; heat shock protein Hsp20 9139..9564 Rhizobium leguminosarum bv. trifolii WSM1325 8011260 YP_002973862.1 CDS Rleg_0011 NC_012850.1 9612 9869 D PFAM: protein of unknown function DUF1150; KEGG: rec:RHECIAT_CH0000407 hypothetical protein; hypothetical protein 9612..9869 Rhizobium leguminosarum bv. trifolii WSM1325 8011261 YP_002973863.1 CDS Rleg_0012 NC_012850.1 10030 10296 R KEGG: ret:RHE_CH02662 hypothetical protein; hypothetical protein complement(10030..10296) Rhizobium leguminosarum bv. trifolii WSM1325 8011262 YP_002973864.1 CDS Rleg_0013 NC_012850.1 10650 11054 D hypothetical protein 10650..11054 Rhizobium leguminosarum bv. trifolii WSM1325 8015387 YP_002973865.1 CDS trmB NC_012850.1 11244 11945 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(11244..11945) Rhizobium leguminosarum bv. trifolii WSM1325 8011263 YP_002973866.1 CDS Rleg_0015 NC_012850.1 11954 13192 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(11954..13192) Rhizobium leguminosarum bv. trifolii WSM1325 8011264 YP_002973867.1 CDS Rleg_0016 NC_012850.1 13371 13787 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ret:RHE_CH00371 transcriptional regulator protein; XRE family transcriptional regulator complement(13371..13787) Rhizobium leguminosarum bv. trifolii WSM1325 8015388 YP_002973868.1 CDS lnt NC_012850.1 13939 15543 R transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(13939..15543) Rhizobium leguminosarum bv. trifolii WSM1325 8011265 YP_002973869.1 CDS Rleg_0018 NC_012850.1 15910 17172 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rec:RHECIAT_CH0001286 probable adenylate cyclase protein; adenylate/guanylate cyclase 15910..17172 Rhizobium leguminosarum bv. trifolii WSM1325 8011266 YP_002973870.1 CDS Rleg_0019 NC_012850.1 17871 18377 R KEGG: msl:Msil_1919 hypothetical protein; hypothetical protein complement(17871..18377) Rhizobium leguminosarum bv. trifolii WSM1325 8011267 YP_002973871.1 CDS Rleg_0020 NC_012850.1 18450 19442 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bpy:Bphyt_4729 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase complement(18450..19442) Rhizobium leguminosarum bv. trifolii WSM1325 8011268 YP_002973872.1 CDS Rleg_0021 NC_012850.1 19503 20096 R hypothetical protein complement(19503..20096) Rhizobium leguminosarum bv. trifolii WSM1325 8011269 YP_002973873.1 CDS Rleg_0022 NC_012850.1 20099 21478 R PFAM: Acetamidase/Formamidase; KEGG: swi:Swit_0965 formamidase; Formamidase complement(20099..21478) Rhizobium leguminosarum bv. trifolii WSM1325 8011270 YP_002973874.1 CDS Rleg_0023 NC_012850.1 22088 22723 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sbl:Sbal_4073 (acyl-carrier-protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(22088..22723) Rhizobium leguminosarum bv. trifolii WSM1325 8011271 YP_002973875.1 CDS Rleg_0024 NC_012850.1 22950 24371 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: eca:ECA2654 GntR family transcriptional regulator; GntR family transcriptional regulator 22950..24371 Rhizobium leguminosarum bv. trifolii WSM1325 8011272 YP_002973876.1 CDS Rleg_0025 NC_012850.1 24569 25030 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bph:Bphy_6989 alkylhydroperoxidase; alkylhydroperoxidase 24569..25030 Rhizobium leguminosarum bv. trifolii WSM1325 8011273 YP_002973877.1 CDS Rleg_0026 NC_012850.1 25147 25437 D TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: oan:Oant_1078 chorismate mutase; chorismate mutase 25147..25437 Rhizobium leguminosarum bv. trifolii WSM1325 8015389 YP_002973878.1 CDS Rleg_0028 NC_012850.1 25777 26910 R PFAM: CBS domain containing protein; transporter-associated region; KEGG: rec:RHECIAT_CH0000413 hemolysin protein; hypothetical protein complement(25777..26910) Rhizobium leguminosarum bv. trifolii WSM1325 8011275 YP_002973879.1 CDS Rleg_0029 NC_012850.1 26907 27422 R PFAM: protein of unknown function UPF0054; KEGG: rec:RHECIAT_CH0000414 hypothetical protein; hypothetical protein complement(26907..27422) Rhizobium leguminosarum bv. trifolii WSM1325 8011276 YP_002973880.1 CDS Rleg_0030 NC_012850.1 27422 28471 R PFAM: PhoH family protein; KEGG: rec:RHECIAT_CH0000415 phosphate starvation inducible protein; PhoH family protein complement(27422..28471) Rhizobium leguminosarum bv. trifolii WSM1325 8011277 YP_002973881.1 CDS Rleg_0031 NC_012850.1 28490 29911 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(28490..29911) Rhizobium leguminosarum bv. trifolii WSM1325 8011278 YP_002973882.1 CDS Rleg_0032 NC_012850.1 30232 31029 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rec:RHECIAT_CH0000417 1-acyl-sn-glycerol-3-phosphate acyltransferase (phospholipid/glycerol acyltransferase) protein; phospholipid/glycerol acyltransferase complement(30232..31029) Rhizobium leguminosarum bv. trifolii WSM1325 8011279 YP_002973883.1 CDS Rleg_0033 NC_012850.1 31057 31485 R PFAM: ferric-uptake regulator; KEGG: rec:RHECIAT_CH0000418 ferric uptake regulation protein; ferric uptake regulator family protein complement(31057..31485) Rhizobium leguminosarum bv. trifolii WSM1325 8011280 YP_002973884.1 CDS Rleg_0034 NC_012850.1 31568 32062 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0000419 ribosomal-protein-alanine N-acetyltransferase protein; N-acetyltransferase GCN5 complement(31568..32062) Rhizobium leguminosarum bv. trifolii WSM1325 8011281 YP_002973885.1 CDS Rleg_0035 NC_012850.1 32065 32727 R PFAM: peptidase M22 glycoprotease; KEGG: ret:RHE_CH00380 O-sialoglycoprotein endopeptidase protein; peptidase M22 glycoprotease complement(32065..32727) Rhizobium leguminosarum bv. trifolii WSM1325 8011282 YP_002973886.1 CDS Rleg_0036 NC_012850.1 32816 33382 R PFAM: Scaffold protein Nfu/NifU ; nitrogen-fixing NifU domain protein; KEGG: rec:RHECIAT_CH0000421 nitrogen fixation protein; Scaffold protein Nfu/NifU complement(32816..33382) Rhizobium leguminosarum bv. trifolii WSM1325 8011283 YP_002973887.1 CDS Rleg_0037 NC_012850.1 33593 34084 R PFAM: UspA domain protein; KEGG: ret:RHE_CH00382 universal stress protein; UspA domain-containing protein complement(33593..34084) Rhizobium leguminosarum bv. trifolii WSM1325 8011284 YP_002973888.1 CDS Rleg_0038 NC_012850.1 34214 35278 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(34214..35278) Rhizobium leguminosarum bv. trifolii WSM1325 8011285 YP_002973889.1 CDS Rleg_0039 NC_012850.1 35409 35807 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH00384 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(35409..35807) Rhizobium leguminosarum bv. trifolii WSM1325 8011286 YP_002973890.1 CDS Rleg_0040 NC_012850.1 35996 36424 D PFAM: peptidase M15A; protein of unknown function DUF882; KEGG: rec:RHECIAT_CH0000425 hypothetical protein; peptidase M15A 35996..36424 Rhizobium leguminosarum bv. trifolii WSM1325 8011287 YP_002973891.1 CDS Rleg_0041 NC_012850.1 36507 37127 R PFAM: regulatory protein TetR; KEGG: mes:Meso_3334 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(36507..37127) Rhizobium leguminosarum bv. trifolii WSM1325 8011288 YP_002973892.1 CDS Rleg_0042 NC_012850.1 37209 38207 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_3360 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 37209..38207 Rhizobium leguminosarum bv. trifolii WSM1325 8011289 YP_002973893.1 CDS Rleg_0043 NC_012850.1 38256 38660 D KEGG: reh:H16_A1246 hypothetical protein; hypothetical protein 38256..38660 Rhizobium leguminosarum bv. trifolii WSM1325 8011290 YP_002973894.1 CDS Rleg_0044 NC_012850.1 38688 40268 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: rec:RHECIAT_CH0000426 virulence factor transmembrane protein; integral membrane protein MviN complement(38688..40268) Rhizobium leguminosarum bv. trifolii WSM1325 8011291 YP_002973895.1 CDS Rleg_0045 NC_012850.1 40307 43213 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(40307..43213) Rhizobium leguminosarum bv. trifolii WSM1325 8011292 YP_002973896.1 CDS Rleg_0046 NC_012850.1 43368 43643 R KEGG: rec:RHECIAT_CH0000428 hypothetical protein; hypothetical protein complement(43368..43643) Rhizobium leguminosarum bv. trifolii WSM1325 8011293 YP_002973897.1 CDS Rleg_0047 NC_012850.1 43656 46382 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(43656..46382) Rhizobium leguminosarum bv. trifolii WSM1325 8011294 YP_002973898.1 CDS Rleg_0048 NC_012850.1 46496 48781 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 46496..48781 Rhizobium leguminosarum bv. trifolii WSM1325 8011295 YP_002973899.1 CDS Rleg_0049 NC_012850.1 49014 50003 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0000431 transcriptional regulator protein; AraC family transcriptional regulator 49014..50003 Rhizobium leguminosarum bv. trifolii WSM1325 8011296 YP_002973900.1 CDS Rleg_0050 NC_012850.1 50340 51215 R KEGG: rec:RHECIAT_CH0000432 hypothetical protein; hypothetical protein complement(50340..51215) Rhizobium leguminosarum bv. trifolii WSM1325 8011297 YP_002973901.1 CDS Rleg_0051 NC_012850.1 51324 53606 R PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: rec:RHECIAT_CH0000433 two-component sensor histidine kinase/response regulator hybrid protein; histidine kinase complement(51324..53606) Rhizobium leguminosarum bv. trifolii WSM1325 8011298 YP_002973902.1 CDS Rleg_0052 NC_012850.1 53662 54165 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(53662..54165) Rhizobium leguminosarum bv. trifolii WSM1325 8011299 YP_002973903.1 CDS Rleg_0053 NC_012850.1 54162 55022 R PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ret:RHE_CH00393 rRNA methylase; tRNA/rRNA methyltransferase SpoU complement(54162..55022) Rhizobium leguminosarum bv. trifolii WSM1325 8011300 YP_002973904.1 CDS Rleg_0054 NC_012850.1 55019 56116 R KEGG: rec:RHECIAT_CH0000436 probable SAM-dependent methyltransferase protein; SAM-dependent methyltransferase protein complement(55019..56116) Rhizobium leguminosarum bv. trifolii WSM1325 8011301 YP_002973905.1 CDS Rleg_0055 NC_012850.1 56302 56892 R PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0000437 hydrolase protein, MutT/NUDIX family; NUDIX hydrolase complement(56302..56892) Rhizobium leguminosarum bv. trifolii WSM1325 8011302 YP_002973906.1 CDS Rleg_0056 NC_012850.1 57016 57471 D PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rec:RHECIAT_CH0000438 hypothetical protein; carbon monoxide dehydrogenase subunit G 57016..57471 Rhizobium leguminosarum bv. trifolii WSM1325 8011303 YP_002973907.1 CDS Rleg_0057 NC_012850.1 57506 57943 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0000439 acetyltransferase protein; N-acetyltransferase GCN5 57506..57943 Rhizobium leguminosarum bv. trifolii WSM1325 8011304 YP_002973908.1 CDS Rleg_0058 NC_012850.1 57996 58328 R KEGG: ret:RHE_CH00398 hypothetical protein; hypothetical protein complement(57996..58328) Rhizobium leguminosarum bv. trifolii WSM1325 8011305 YP_002973909.1 CDS ihfB NC_012850.1 58490 58789 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(58490..58789) Rhizobium leguminosarum bv. trifolii WSM1325 8011306 YP_002973910.1 CDS Rleg_0060 NC_012850.1 58819 59769 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rec:RHECIAT_CH0000442 proteinase IV protein; signal peptide peptidase SppA, 36K type complement(58819..59769) Rhizobium leguminosarum bv. trifolii WSM1325 8015390 YP_002973911.1 CDS Rleg_0061 NC_012850.1 59995 60660 D PFAM: protein of unknown function DUF1239; KEGG: rec:RHECIAT_CH0000443 hypothetical protein; hypothetical protein 59995..60660 Rhizobium leguminosarum bv. trifolii WSM1325 8011307 YP_002973912.1 CDS Rleg_0062 NC_012850.1 60715 61329 D PFAM: OstA family protein; KEGG: rec:RHECIAT_CH0000444 hypothetical protein; OstA family protein 60715..61329 Rhizobium leguminosarum bv. trifolii WSM1325 8011308 YP_002973913.1 CDS Rleg_0063 NC_012850.1 61370 62146 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000445 probable amino acid ABC transporter, ATP-binding protein; ABC transporter 61370..62146 Rhizobium leguminosarum bv. trifolii WSM1325 8011309 YP_002973914.1 CDS Rleg_0064 NC_012850.1 62320 63879 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 62320..63879 Rhizobium leguminosarum bv. trifolii WSM1325 8011310 YP_002973915.1 CDS Rleg_0065 NC_012850.1 64007 64930 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0000447 permease protein; hypothetical protein 64007..64930 Rhizobium leguminosarum bv. trifolii WSM1325 8011311 YP_002973916.1 CDS Rleg_0066 NC_012850.1 65223 65798 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rec:RHECIAT_CH0000448 probable sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA 65223..65798 Rhizobium leguminosarum bv. trifolii WSM1325 8011312 YP_002973917.1 CDS Rleg_0067 NC_012850.1 65869 66333 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rec:RHECIAT_CH0000449 protein-N(pi)-phosphohistidine-sugar phosphotransferase protein (enzyme II of the phosphotransferase system); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 65869..66333 Rhizobium leguminosarum bv. trifolii WSM1325 8011313 YP_002973918.1 CDS Rleg_0068 NC_012850.1 66479 66673 D hypothetical protein 66479..66673 Rhizobium leguminosarum bv. trifolii WSM1325 8011314 YP_002973919.1 CDS Rleg_0069 NC_012850.1 66833 67732 R PFAM: PfkB domain protein; KEGG: ret:RHE_CH00409 ribose kinase protein; PfkB domain-containing protein complement(66833..67732) Rhizobium leguminosarum bv. trifolii WSM1325 8011315 YP_002973920.1 CDS Rleg_0070 NC_012850.1 67813 69036 R PFAM: protein of unknown function DUF195; KEGG: rec:RHECIAT_CH0000452 DNA recombination protein; hypothetical protein complement(67813..69036) Rhizobium leguminosarum bv. trifolii WSM1325 8015391 YP_002973921.1 CDS Rleg_0071 NC_012850.1 69243 70727 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: rec:RHECIAT_CH0000453 probable methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 69243..70727 Rhizobium leguminosarum bv. trifolii WSM1325 8015392 YP_002973922.1 CDS def NC_012850.1 70825 71340 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 70825..71340 Rhizobium leguminosarum bv. trifolii WSM1325 8011316 YP_002973923.1 CDS Rleg_0073 NC_012850.1 71406 71666 D KEGG: rec:RHECIAT_CH0000455 probable plasmid stabilization protein; plasmid stabilization protein 71406..71666 Rhizobium leguminosarum bv. trifolii WSM1325 8011317 YP_002973924.1 CDS Rleg_0074 NC_012850.1 71663 72082 D PFAM: PilT protein domain protein; KEGG: ret:RHE_CH00413 plasmid stability protein; PilT protein domain-containing protein 71663..72082 Rhizobium leguminosarum bv. trifolii WSM1325 8011318 YP_002973925.1 CDS fmt NC_012850.1 72103 73038 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 72103..73038 Rhizobium leguminosarum bv. trifolii WSM1325 8011319 YP_002973926.1 CDS truA NC_012850.1 73038 73856 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 73038..73856 Rhizobium leguminosarum bv. trifolii WSM1325 8011320 YP_002973927.1 CDS Rleg_0077 NC_012850.1 73863 74459 R KEGG: ret:RHE_CH00416 hypothetical protein; hypothetical protein complement(73863..74459) Rhizobium leguminosarum bv. trifolii WSM1325 8011321 YP_002973928.1 CDS Rleg_0078 NC_012850.1 74446 75639 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(74446..75639) Rhizobium leguminosarum bv. trifolii WSM1325 8011322 YP_002973929.1 CDS dapD NC_012850.1 75741 76601 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(75741..76601) Rhizobium leguminosarum bv. trifolii WSM1325 8011323 YP_002973930.1 CDS Rleg_0080 NC_012850.1 76794 77660 D PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0000462 hypothetical protein; hypothetical protein 76794..77660 Rhizobium leguminosarum bv. trifolii WSM1325 8011324 YP_002973931.1 CDS Rleg_0081 NC_012850.1 77747 78385 R SMART: Calcium-binding EF-hand-containing protein; KEGG: ret:RHE_CH00420 hypothetical protein; calcium-binding domain-containing protein complement(77747..78385) Rhizobium leguminosarum bv. trifolii WSM1325 8011325 YP_002973932.1 CDS Rleg_0082 NC_012850.1 78490 79197 R TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0000464 hydrolase protein; pyrimidine 5'-nucleotidase complement(78490..79197) Rhizobium leguminosarum bv. trifolii WSM1325 8015393 YP_002973933.1 CDS Rleg_0083 NC_012850.1 79300 80376 D KEGG: ret:RHE_CH00423 methylated-DNA-[protein]-cysteine S-methyltransferase protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SMART: helix-turn-helix- domain containing protein AraC type; methylated-DNA--protein-cysteine methyltransferase 79300..80376 Rhizobium leguminosarum bv. trifolii WSM1325 8015394 YP_002973934.1 CDS Rleg_0084 NC_012850.1 80373 81143 D KEGG: ret:RHE_CH00424 carboxyphosphonoenolpyruvate phosphonomutase protein; carboxyphosphonoenolpyruvate phosphonomutase protein 80373..81143 Rhizobium leguminosarum bv. trifolii WSM1325 8011326 YP_002973935.1 CDS Rleg_0085 NC_012850.1 81209 82357 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ret:RHE_CH00425 L-lactate dehydrogenase (cytochrome) protein; FMN-dependent alpha-hydroxy acid dehydrogenase complement(81209..82357) Rhizobium leguminosarum bv. trifolii WSM1325 8011327 YP_002973936.1 CDS Rleg_0086 NC_012850.1 82427 83314 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(82427..83314) Rhizobium leguminosarum bv. trifolii WSM1325 8011328 YP_002973937.1 CDS Rleg_0087 NC_012850.1 83458 83997 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rec:RHECIAT_CH0000470 RNA polymerase sigma-70 factor protein, ECF family; ECF subfamily RNA polymerase sigma-24 subunit 83458..83997 Rhizobium leguminosarum bv. trifolii WSM1325 8011329 YP_002973938.1 CDS Rleg_0088 NC_012850.1 83994 84713 D KEGG: rec:RHECIAT_CH0000471 hypothetical protein; hypothetical protein 83994..84713 Rhizobium leguminosarum bv. trifolii WSM1325 8011330 YP_002973939.1 CDS Rleg_0089 NC_012850.1 84836 85390 D PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: rec:RHECIAT_CH0000472 transforming growth factor-induced protein (and secreted protein MPB70); beta-Ig-H3/fasciclin 84836..85390 Rhizobium leguminosarum bv. trifolii WSM1325 8011331 YP_002973940.1 CDS Rleg_0090 NC_012850.1 85663 86739 R PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rec:RHECIAT_CH0000473 probable two-component sensor histidine kinase protein; signal transduction histidine kinase complement(85663..86739) Rhizobium leguminosarum bv. trifolii WSM1325 8011332 YP_002973941.1 CDS Rleg_0091 NC_012850.1 86861 87136 R KEGG: ret:RHE_CH00433 hypothetical protein; hypothetical protein complement(86861..87136) Rhizobium leguminosarum bv. trifolii WSM1325 8011333 YP_002973942.1 CDS Rleg_0092 NC_012850.1 87257 87481 R KEGG: ret:RHE_CH00434 hypothetical protein; hypothetical protein complement(87257..87481) Rhizobium leguminosarum bv. trifolii WSM1325 8011334 YP_002973943.1 CDS Rleg_0093 NC_012850.1 87615 87824 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rec:RHECIAT_CH0000476 probable cold shock protein; cold-shock protein complement(87615..87824) Rhizobium leguminosarum bv. trifolii WSM1325 8011335 YP_002973944.1 CDS engB NC_012850.1 88092 88745 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(88092..88745) Rhizobium leguminosarum bv. trifolii WSM1325 8015395 YP_002973945.1 CDS Rleg_0095 NC_012850.1 88899 90692 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(88899..90692) Rhizobium leguminosarum bv. trifolii WSM1325 8015396 YP_002973946.1 CDS rnpA NC_012850.1 90692 91093 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(90692..91093) Rhizobium leguminosarum bv. trifolii WSM1325 8011336 YP_002973947.1 CDS rpmH NC_012850.1 91114 91248 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(91114..91248) Rhizobium leguminosarum bv. trifolii WSM1325 8011337 YP_002973948.1 CDS Rleg_0098 NC_012850.1 91668 93665 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0000481 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 91668..93665 Rhizobium leguminosarum bv. trifolii WSM1325 8011338 YP_002973949.1 CDS Rleg_0099 NC_012850.1 93823 95343 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0000482 two-component sensor histidine kinase protein; histidine kinase 93823..95343 Rhizobium leguminosarum bv. trifolii WSM1325 8011339 YP_002973950.1 CDS Rleg_0100 NC_012850.1 96024 97955 D KEGG: hypothetical protein; hypothetical protein 96024..97955 Rhizobium leguminosarum bv. trifolii WSM1325 8011341 YP_002973951.1 CDS Rleg_0101 NC_012850.1 97984 98202 D KEGG: ret:RHE_CH03206 hypothetical protein; hypothetical protein 97984..98202 Rhizobium leguminosarum bv. trifolii WSM1325 8011342 YP_002973952.1 CDS Rleg_0102 NC_012850.1 98295 98540 R PFAM: protein of unknown function DUF982; KEGG: rec:RHECIAT_CH0004115 hypothetical protein; hypothetical protein complement(98295..98540) Rhizobium leguminosarum bv. trifolii WSM1325 8011343 YP_002973953.1 CDS Rleg_0103 NC_012850.1 98779 99300 R KEGG: bur:Bcep18194_A6246 hypothetical protein; hypothetical protein complement(98779..99300) Rhizobium leguminosarum bv. trifolii WSM1325 8011344 YP_002973954.1 CDS Rleg_0104 NC_012850.1 99506 99688 D KEGG: atc:AGR_L_287 hypothetical protein; hypothetical protein 99506..99688 Rhizobium leguminosarum bv. trifolii WSM1325 8011345 YP_002973955.1 CDS Rleg_0105 NC_012850.1 99716 100012 D hypothetical protein 99716..100012 Rhizobium leguminosarum bv. trifolii WSM1325 8015397 YP_002973956.1 CDS Rleg_0106 NC_012850.1 100275 100724 R KEGG: rec:RHECIAT_CH0000509 hypothetical protein; hypothetical protein complement(100275..100724) Rhizobium leguminosarum bv. trifolii WSM1325 8015398 YP_002973957.1 CDS Rleg_0107 NC_012850.1 100978 101565 D KEGG: rec:RHECIAT_CH0000510 hypothetical protein; hypothetical protein 100978..101565 Rhizobium leguminosarum bv. trifolii WSM1325 8011346 YP_002973958.1 CDS Rleg_0108 NC_012850.1 101656 102354 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bja:blr7575 O-methyl transferase; type 11 methyltransferase complement(101656..102354) Rhizobium leguminosarum bv. trifolii WSM1325 8011347 YP_002973959.1 CDS Rleg_0109 NC_012850.1 102554 102874 D KEGG: rec:RHECIAT_CH0000511 hypothetical protein; hypothetical protein 102554..102874 Rhizobium leguminosarum bv. trifolii WSM1325 8011348 YP_002973960.1 CDS Rleg_0110 NC_012850.1 103066 103437 D KEGG: rec:RHECIAT_CH0000512 hypothetical protein; hypothetical protein 103066..103437 Rhizobium leguminosarum bv. trifolii WSM1325 8011349 YP_002973961.1 CDS Rleg_0111 NC_012850.1 103592 103894 D KEGG: rec:RHECIAT_CH0000513 hypothetical protein; hypothetical protein 103592..103894 Rhizobium leguminosarum bv. trifolii WSM1325 8015399 YP_002973962.1 CDS Rleg_0112 NC_012850.1 104191 104862 D PFAM: methyltransferase type 12; KEGG: ret:RHE_CH00448 phospholipid N-methyltransferase protein; type 12 methyltransferase 104191..104862 Rhizobium leguminosarum bv. trifolii WSM1325 8011350 YP_002973963.1 CDS Rleg_0113 NC_012850.1 104882 105517 D PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein; TetR family transcriptional regulator 104882..105517 Rhizobium leguminosarum bv. trifolii WSM1325 8011351 YP_002973964.1 CDS Rleg_0114 NC_012850.1 105825 106706 D PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0000515 probable oxidoreductase protein; aldo/keto reductase 105825..106706 Rhizobium leguminosarum bv. trifolii WSM1325 8011352 YP_002973965.1 CDS Rleg_0115 NC_012850.1 107377 108654 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: rec:RHECIAT_CH0000517 hypothetical protein; hypothetical protein 107377..108654 Rhizobium leguminosarum bv. trifolii WSM1325 8011353 YP_002973966.1 CDS Rleg_0116 NC_012850.1 108839 110089 D PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_CH00451 D-amino acid dehydrogenase protein; D-amino-acid dehydrogenase 108839..110089 Rhizobium leguminosarum bv. trifolii WSM1325 8011354 YP_002973967.1 CDS Rleg_0117 NC_012850.1 110099 110809 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oxidoreductase protein; short-chain dehydrogenase/reductase SDR 110099..110809 Rhizobium leguminosarum bv. trifolii WSM1325 8011355 YP_002973968.1 CDS Rleg_0118 NC_012850.1 110825 111862 D PFAM: proline racemase; KEGG: ret:RHE_CH00452 proline racemase protein; proline racemase 110825..111862 Rhizobium leguminosarum bv. trifolii WSM1325 8011356 YP_002973969.1 CDS Rleg_0119 NC_012850.1 111968 113086 D PFAM: transposase IS4 family protein; KEGG: ecd:ECDH10B_2558 IS186/IS421 transposase; transposase IS4 family protein 111968..113086 Rhizobium leguminosarum bv. trifolii WSM1325 8011357 YP_002973970.1 CDS Rleg_0120 NC_012850.1 113470 114153 R PFAM: regulatory protein TetR; KEGG: rpt:Rpal_2059 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(113470..114153) Rhizobium leguminosarum bv. trifolii WSM1325 8011358 YP_002973971.1 CDS Rleg_0121 NC_012850.1 114235 114975 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_pAT_252 hypothetical protein; short-chain dehydrogenase/reductase SDR 114235..114975 Rhizobium leguminosarum bv. trifolii WSM1325 8011359 YP_002973972.1 CDS Rleg_0122 NC_012850.1 115478 117025 R KEGG: rec:RHECIAT_CH0000527 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(115478..117025) Rhizobium leguminosarum bv. trifolii WSM1325 8011360 YP_002973973.1 CDS Rleg_0123 NC_012850.1 117457 118131 R KEGG: smd:Smed_4441 hypothetical protein; hypothetical protein complement(117457..118131) Rhizobium leguminosarum bv. trifolii WSM1325 8011361 YP_002973974.1 CDS Rleg_0124 NC_012850.1 118384 118860 R PFAM: RbsD or FucU transport; KEGG: ret:RHE_CH00463 fucose dissimilation pathway protein; transporter complement(118384..118860) Rhizobium leguminosarum bv. trifolii WSM1325 8011362 YP_002973975.1 CDS Rleg_0125 NC_012850.1 118844 120091 R PFAM: ROK family protein; KEGG: rec:RHECIAT_CH0000535 sugar transcriptional regulator protein, ROK family; ROK family protein complement(118844..120091) Rhizobium leguminosarum bv. trifolii WSM1325 8011363 YP_002973976.1 CDS Rleg_0126 NC_012850.1 120320 121339 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH00465 fructose ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 120320..121339 Rhizobium leguminosarum bv. trifolii WSM1325 8011364 YP_002973977.1 CDS Rleg_0127 NC_012850.1 121495 122559 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0000537 fructose ABC transporter, permease protein; inner-membrane translocator 121495..122559 Rhizobium leguminosarum bv. trifolii WSM1325 8011365 YP_002973978.1 CDS Rleg_0128 NC_012850.1 122562 123344 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000538 fructose ABC transporter, ATP-binding protein; ABC transporter 122562..123344 Rhizobium leguminosarum bv. trifolii WSM1325 8011366 YP_002973979.1 CDS frcK NC_012850.1 123341 123973 D KEGG: ret:RHE_CH00468 fructose transport system kinase; fructose transport system kinase 123341..123973 Rhizobium leguminosarum bv. trifolii WSM1325 8011367 YP_002973980.1 CDS Rleg_0130 NC_012850.1 124085 125131 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 124085..125131 Rhizobium leguminosarum bv. trifolii WSM1325 8015400 YP_002973981.1 CDS Rleg_0131 NC_012850.1 125305 126483 D KEGG: ret:RHE_CH00470 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 125305..126483 Rhizobium leguminosarum bv. trifolii WSM1325 8011368 YP_002973982.1 CDS Rleg_0132 NC_012850.1 126674 127210 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0000542 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 126674..127210 Rhizobium leguminosarum bv. trifolii WSM1325 8011369 YP_002973983.1 CDS Rleg_0133 NC_012850.1 127443 128390 R PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: hne:HNE_3446 ISHne3, transposase; transposase IS116/IS110/IS902 family protein complement(127443..128390) Rhizobium leguminosarum bv. trifolii WSM1325 8011370 YP_002973984.1 CDS Rleg_0134 NC_012850.1 128895 129524 R PFAM: glutathione S-transferase domain; KEGG: mlo:mlr2042 glutathione S-transferase; glutathione S-transferase domain protein complement(128895..129524) Rhizobium leguminosarum bv. trifolii WSM1325 8011371 YP_002973985.1 CDS Rleg_0135 NC_012850.1 129622 130104 R KEGG: rec:RHECIAT_CH0000543 hypothetical conserved membrane protein; hypothetical protein complement(129622..130104) Rhizobium leguminosarum bv. trifolii WSM1325 8011372 YP_002973986.1 CDS Rleg_0136 NC_012850.1 130107 130931 R PFAM: NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: rpd:RPD_2341 NmrA-like; NmrA family protein complement(130107..130931) Rhizobium leguminosarum bv. trifolii WSM1325 8011373 YP_002973987.1 CDS Rleg_0137 NC_012850.1 131033 131686 D PFAM: regulatory protein TetR; KEGG: ret:RHE_CH00473 TetR family transcriptional regulator; TetR family transcriptional regulator 131033..131686 Rhizobium leguminosarum bv. trifolii WSM1325 8015401 YP_002973988.1 CDS pyrE NC_012850.1 131759 132448 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 131759..132448 Rhizobium leguminosarum bv. trifolii WSM1325 8011374 YP_002973989.1 CDS Rleg_0139 NC_012850.1 132510 133436 D PFAM: PfkB domain protein; KEGG: rec:RHECIAT_CH0000546 fructokinase protein; PfkB domain-containing protein 132510..133436 Rhizobium leguminosarum bv. trifolii WSM1325 8011375 YP_002973990.1 CDS Rleg_0140 NC_012850.1 133611 134018 R PFAM: regulatory protein ArsR; hypothetical protein; SMART: regulatory protein ArsR; KEGG: ret:RHE_CH00427 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(133611..134018) Rhizobium leguminosarum bv. trifolii WSM1325 8015402 YP_002973991.1 CDS Rleg_0141 NC_012850.1 134161 135123 D PFAM: fatty acid desaturase; KEGG: ret:RHE_CH00426 fatty acid desaturase protein; fatty acid desaturase 134161..135123 Rhizobium leguminosarum bv. trifolii WSM1325 8011376 YP_002973992.1 CDS Rleg_0142 NC_012850.1 135199 136614 R KEGG: ret:RHE_CH00476 trehalose-6-phosphate synthase protein; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) complement(135199..136614) Rhizobium leguminosarum bv. trifolii WSM1325 8011377 YP_002973993.1 CDS pgi NC_012850.1 137195 138820 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(137195..138820) Rhizobium leguminosarum bv. trifolii WSM1325 8015403 YP_002973994.1 CDS Rleg_0144 NC_012850.1 138972 140672 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(138972..140672) Rhizobium leguminosarum bv. trifolii WSM1325 8011378 YP_002973995.1 CDS Rleg_0145 NC_012850.1 140918 141310 D PFAM: PRC-barrel domain protein; KEGG: rec:RHECIAT_CH0000550 hypothetical protein; PRC-barrel domain-containing protein 140918..141310 Rhizobium leguminosarum bv. trifolii WSM1325 8011379 YP_002973996.1 CDS Rleg_0146 NC_012850.1 141530 143983 R PFAM: glycoside hydrolase family 2 sugar binding; KEGG: rec:RHECIAT_CH0000551 beta-mannosidase protein; family 2 glycoside hydrolase complement(141530..143983) Rhizobium leguminosarum bv. trifolii WSM1325 8011380 YP_002973997.1 CDS Rleg_0147 NC_012850.1 144065 144460 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH00481 lactoylglutathione lyase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(144065..144460) Rhizobium leguminosarum bv. trifolii WSM1325 8015404 YP_002973998.1 CDS Rleg_0148 NC_012850.1 144509 145258 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000553 probable proline/glycine betaine ABC transporter, permease protein; ABC transporter permease complement(144509..145258) Rhizobium leguminosarum bv. trifolii WSM1325 8011381 YP_002973999.1 CDS Rleg_0149 NC_012850.1 145255 146199 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000554 probable proline/glycine betaine ABC transporter, ATP-binding protein; ABC transporter complement(145255..146199) Rhizobium leguminosarum bv. trifolii WSM1325 8011382 YP_002974000.1 CDS Rleg_0150 NC_012850.1 146196 147362 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000555 probable proline/glycine betaine ABC transporter, permease protein; ABC transporter permease complement(146196..147362) Rhizobium leguminosarum bv. trifolii WSM1325 8011383 YP_002974001.1 CDS Rleg_0151 NC_012850.1 147453 148361 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ret:RHE_CH00485 glycine betaine ABC transporter, substrate binding protein; glycine/betaine ABC transporter substrate-binding protein complement(147453..148361) Rhizobium leguminosarum bv. trifolii WSM1325 8011384 YP_002974002.1 CDS Rleg_0152 NC_012850.1 148783 150003 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0000558 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 148783..150003 Rhizobium leguminosarum bv. trifolii WSM1325 8011385 YP_002974003.1 CDS Rleg_0153 NC_012850.1 150032 150757 D PFAM: CutC family protein; KEGG: rec:RHECIAT_CH0000559 copper homeostasis protein; CutC family protein 150032..150757 Rhizobium leguminosarum bv. trifolii WSM1325 8011386 YP_002974004.1 CDS Rleg_0154 NC_012850.1 150992 152011 R PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_CH0000560 probable Zn-dependent alcohol dehydrogenase protein; alcohol dehydrogenase GroES domain protein complement(150992..152011) Rhizobium leguminosarum bv. trifolii WSM1325 8011387 YP_002974005.1 CDS Rleg_0155 NC_012850.1 152244 153218 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0000561 probable sugar ABC transporter, permease protein; inner-membrane translocator complement(152244..153218) Rhizobium leguminosarum bv. trifolii WSM1325 8011388 YP_002974006.1 CDS Rleg_0156 NC_012850.1 153246 154799 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH00491 sugar ABC transporter, ATP-binding protein; ABC transporter complement(153246..154799) Rhizobium leguminosarum bv. trifolii WSM1325 8011389 YP_002974007.1 CDS Rleg_0157 NC_012850.1 154908 155897 R KEGG: ret:RHE_CH00492 sugar ABC transporter, substrate-binding protein; sugar ABC transporter substrate-binding protein complement(154908..155897) Rhizobium leguminosarum bv. trifolii WSM1325 8015405 YP_002974008.1 CDS Rleg_0158 NC_012850.1 156106 156552 R PFAM: RbsD or FucU transport; KEGG: ret:RHE_CH00493 fucose dissimilation pathway protein; transporter complement(156106..156552) Rhizobium leguminosarum bv. trifolii WSM1325 8011390 YP_002974009.1 CDS Rleg_0159 NC_012850.1 156562 157581 R PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0000565 L-fucose dehydrogenase protein; pyridoxal 4-dehydrogenase complement(156562..157581) Rhizobium leguminosarum bv. trifolii WSM1325 8011391 YP_002974010.1 CDS Rleg_0160 NC_012850.1 157727 159229 R PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: rec:RHECIAT_CH0000566 probable altronate dehydratase protein; galactarate dehydratase complement(157727..159229) Rhizobium leguminosarum bv. trifolii WSM1325 8015406 YP_002974011.1 CDS Rleg_0161 NC_012850.1 159454 160353 D PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0000567 probable transcriptional regulator protein; GntR family transcriptional regulator 159454..160353 Rhizobium leguminosarum bv. trifolii WSM1325 8011392 YP_002974012.1 CDS Rleg_0162 NC_012850.1 160617 161735 D PFAM: transposase IS4 family protein; KEGG: ecl:EcolC_3640 transposase IS4 family protein; transposase IS4 family protein 160617..161735 Rhizobium leguminosarum bv. trifolii WSM1325 8011393 YP_002974013.1 CDS Rleg_0163 NC_012850.1 162020 164020 D PFAM: ABC transporter; ABC transporter; SbmABacA family protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000570 probable ABC transporter, ATP-binding protein; sigma-54 interacting domain-containing protein 162020..164020 Rhizobium leguminosarum bv. trifolii WSM1325 8011394 YP_002974014.1 CDS Rleg_0164 NC_012850.1 164047 164505 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: cak:Caul_1741 MarR family transcriptional regulator; MarR family transcriptional regulator complement(164047..164505) Rhizobium leguminosarum bv. trifolii WSM1325 8015407 YP_002974015.1 CDS Rleg_0165 NC_012850.1 164633 165010 D KEGG: cak:Caul_1742 hypothetical protein; hypothetical protein 164633..165010 Rhizobium leguminosarum bv. trifolii WSM1325 8011395 YP_002974016.1 CDS Rleg_0166 NC_012850.1 165149 165400 R hypothetical protein complement(165149..165400) Rhizobium leguminosarum bv. trifolii WSM1325 8011396 YP_002974017.1 CDS Rleg_0167 NC_012850.1 165675 166520 D PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: reh:H16_A2216 SAM-dependent methyltransferase; type 11 methyltransferase 165675..166520 Rhizobium leguminosarum bv. trifolii WSM1325 8015408 YP_002974018.1 CDS Rleg_0168 NC_012850.1 166709 167284 R KEGG: rec:RHECIAT_PC0000028 hypothetical protein; hypothetical protein complement(166709..167284) Rhizobium leguminosarum bv. trifolii WSM1325 8011397 YP_002974019.1 CDS Rleg_0169 NC_012850.1 167359 168849 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH00498 multidrug transport protein; major facilitator superfamily protein complement(167359..168849) Rhizobium leguminosarum bv. trifolii WSM1325 8011398 YP_002974020.1 CDS Rleg_0170 NC_012850.1 169109 169504 R KEGG: ret:RHE_CH00499 hypothetical protein; hypothetical protein complement(169109..169504) Rhizobium leguminosarum bv. trifolii WSM1325 8011399 YP_002974021.1 CDS Rleg_0171 NC_012850.1 169728 170051 R TIGRFAM: addiction module antidote protein; KEGG: rru:Rru_A3082 transcriptional regulator; addiction module antidote protein complement(169728..170051) Rhizobium leguminosarum bv. trifolii WSM1325 8011400 YP_002974022.1 CDS Rleg_0172 NC_012850.1 170053 170418 R TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: btr:Btr_1092 hypothetical protein; addiction module killer protein complement(170053..170418) Rhizobium leguminosarum bv. trifolii WSM1325 8011401 YP_002974023.1 CDS Rleg_0173 NC_012850.1 170415 170888 R KEGG: rec:RHECIAT_CH0000575 hypothetical protein; hypothetical protein complement(170415..170888) Rhizobium leguminosarum bv. trifolii WSM1325 8011402 YP_002974024.1 CDS Rleg_0174 NC_012850.1 171262 172221 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: rec:RHECIAT_CH0000578 probable dioxygenase protein; 2-nitropropane dioxygenase complement(171262..172221) Rhizobium leguminosarum bv. trifolii WSM1325 8011404 YP_002974025.1 CDS Rleg_0175 NC_012850.1 172508 173692 D KEGG: rec:RHECIAT_CH0000580 transcriptional regulator protein; transcriptional regulator 172508..173692 Rhizobium leguminosarum bv. trifolii WSM1325 8011405 YP_002974026.1 CDS Rleg_0176 NC_012850.1 173746 174627 R PFAM: protein of unknown function DUF344; KEGG: ret:RHE_CH00507 hypothetical protein; hypothetical protein complement(173746..174627) Rhizobium leguminosarum bv. trifolii WSM1325 8011406 YP_002974027.1 CDS Rleg_0177 NC_012850.1 174871 176094 D KEGG: ret:RHE_CH00508 phosphate regulon, two-component sensor histidine kinase protein; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 174871..176094 Rhizobium leguminosarum bv. trifolii WSM1325 8011407 YP_002974028.1 CDS Rleg_0178 NC_012850.1 176678 177712 D KEGG: rec:RHECIAT_CH0000584 phosphate ABC transporter, substrate-binding protein; phosphate ABC transporter substrate-binding protein 176678..177712 Rhizobium leguminosarum bv. trifolii WSM1325 8011408 YP_002974029.1 CDS Rleg_0179 NC_012850.1 177883 179364 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000585 phosphate ABC transporter, permease protein; phosphate ABC transporter permease 177883..179364 Rhizobium leguminosarum bv. trifolii WSM1325 8011409 YP_002974030.1 CDS Rleg_0180 NC_012850.1 179361 180683 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH00511 phosphate ABC transporter, permease protein; phosphate ABC transporter permease 179361..180683 Rhizobium leguminosarum bv. trifolii WSM1325 8011410 YP_002974031.1 CDS Rleg_0181 NC_012850.1 180700 181515 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 180700..181515 Rhizobium leguminosarum bv. trifolii WSM1325 8011411 YP_002974032.1 CDS Rleg_0182 NC_012850.1 181560 182273 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rec:RHECIAT_CH0000588 phosphate uptake transcriptional regulator protein; phosphate uptake regulator PhoU 181560..182273 Rhizobium leguminosarum bv. trifolii WSM1325 8011412 YP_002974033.1 CDS Rleg_0183 NC_012850.1 182408 183091 D KEGG: rec:RHECIAT_CH0000589 phosphate regulon, two-component response regulator protein; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; PhoB family transcriptional regulator 182408..183091 Rhizobium leguminosarum bv. trifolii WSM1325 8015409 YP_002974034.1 CDS Rleg_0184 NC_012850.1 183334 183867 R PFAM: GcrA cell cycle regulator; KEGG: rec:RHECIAT_CH0000590 hypothetical protein; GcrA cell cycle regulator complement(183334..183867) Rhizobium leguminosarum bv. trifolii WSM1325 8011413 YP_002974035.1 CDS argD NC_012850.1 184288 185487 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 184288..185487 Rhizobium leguminosarum bv. trifolii WSM1325 8011414 YP_002974036.1 CDS Rleg_0186 NC_012850.1 185530 186444 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 185530..186444 Rhizobium leguminosarum bv. trifolii WSM1325 8011415 YP_002974037.1 CDS hslO NC_012850.1 186535 187527 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 186535..187527 Rhizobium leguminosarum bv. trifolii WSM1325 8011416 YP_002974038.1 CDS Rleg_0188 NC_012850.1 187660 188247 D KEGG: rec:RHECIAT_CH0000594 hypothetical protein; hypothetical protein 187660..188247 Rhizobium leguminosarum bv. trifolii WSM1325 8011417 YP_002974039.1 CDS apaG NC_012850.1 188383 188775 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(188383..188775) Rhizobium leguminosarum bv. trifolii WSM1325 8011418 YP_002974040.1 CDS Rleg_0190 NC_012850.1 189146 190330 R catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase complement(189146..190330) Rhizobium leguminosarum bv. trifolii WSM1325 8011419 YP_002974041.1 CDS Rleg_0191 NC_012850.1 190525 191619 D Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 190525..191619 Rhizobium leguminosarum bv. trifolii WSM1325 8011420 YP_002974042.1 CDS Rleg_0192 NC_012850.1 191883 193268 D PFAM: integrase family protein; KEGG: oan:Oant_2329 phage integrase family protein; integrase family protein 191883..193268 Rhizobium leguminosarum bv. trifolii WSM1325 8011422 YP_002974043.1 CDS Rleg_0193 NC_012850.1 193698 193910 R hypothetical protein complement(193698..193910) Rhizobium leguminosarum bv. trifolii WSM1325 8011423 YP_002974044.1 CDS Rleg_0194 NC_012850.1 194836 196695 D PFAM: AAA ATPase; peptidase M41; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003340 ATP-dependent hydrolase protein; ATPase AAA 194836..196695 Rhizobium leguminosarum bv. trifolii WSM1325 8011424 YP_002974045.1 CDS Rleg_0195 NC_012850.1 196763 197059 D hypothetical protein 196763..197059 Rhizobium leguminosarum bv. trifolii WSM1325 8011425 YP_002974046.1 CDS Rleg_0196 NC_012850.1 197189 199153 D KEGG: bbt:BBta_3314 hypothetical protein; hypothetical protein 197189..199153 Rhizobium leguminosarum bv. trifolii WSM1325 8011426 YP_002974047.1 CDS Rleg_0197 NC_012850.1 199362 199601 D hypothetical protein 199362..199601 Rhizobium leguminosarum bv. trifolii WSM1325 8011427 YP_002974048.1 CDS Rleg_0198 NC_012850.1 199729 202566 R KEGG: sme:SMc02155 hypothetical protein; hypothetical protein complement(199729..202566) Rhizobium leguminosarum bv. trifolii WSM1325 8011428 YP_002974049.1 CDS Rleg_0199 NC_012850.1 202580 205489 R PFAM: protein of unknown function DUF1156; KEGG: sme:SMc02154 hypothetical protein; hypothetical protein complement(202580..205489) Rhizobium leguminosarum bv. trifolii WSM1325 8011429 YP_002974050.1 CDS Rleg_0200 NC_012850.1 205492 206133 R KEGG: sme:SMc04429 hypothetical protein; hypothetical protein complement(205492..206133) Rhizobium leguminosarum bv. trifolii WSM1325 8011430 YP_002974051.1 CDS Rleg_0201 NC_012850.1 206135 207463 R KEGG: sme:SMc02153 hypothetical protein; hypothetical protein complement(206135..207463) Rhizobium leguminosarum bv. trifolii WSM1325 8011431 YP_002974052.1 CDS Rleg_0202 NC_012850.1 207463 210975 R PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: sme:SMc02152 helicase protein; helicase domain-containing protein complement(207463..210975) Rhizobium leguminosarum bv. trifolii WSM1325 8015410 YP_002974053.1 CDS Rleg_0203 NC_012850.1 211311 213323 R PFAM: protein of unknown function DUF87; KEGG: rsh:Rsph17029_3200 ATPase-like protein; hypothetical protein complement(211311..213323) Rhizobium leguminosarum bv. trifolii WSM1325 8011432 YP_002974054.1 CDS Rleg_0204 NC_012850.1 213320 214357 R KEGG: rsh:Rsph17029_3199 hypothetical protein; hypothetical protein complement(213320..214357) Rhizobium leguminosarum bv. trifolii WSM1325 8011433 YP_002974055.1 CDS Rleg_0205 NC_012850.1 215709 216218 R PFAM: protein of unknown function DUF995; KEGG: smd:Smed_3668 protein of unknown function DUF995; hypothetical protein complement(215709..216218) Rhizobium leguminosarum bv. trifolii WSM1325 8015411 YP_002974056.1 CDS Rleg_0206 NC_012850.1 216237 217202 R KEGG: sme:SM_b20462 cellulase H precursor protein; cellulase H protein complement(216237..217202) Rhizobium leguminosarum bv. trifolii WSM1325 8011434 YP_002974057.1 CDS Rleg_0207 NC_012850.1 217195 219102 R KEGG: sme:SM_b20460 cellulose synthase protein; cellulose synthase protein complement(217195..219102) Rhizobium leguminosarum bv. trifolii WSM1325 8011435 YP_002974058.1 CDS Rleg_0208 NC_012850.1 219099 220085 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: sme:SM_b20459 UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase complement(219099..220085) Rhizobium leguminosarum bv. trifolii WSM1325 8011436 YP_002974059.1 CDS Rleg_0209 NC_012850.1 220085 221131 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: sme:SM_b20458 dTDP-glucose 4,6-dehydratase protein; SNP /replace=T; NAD-dependent epimerase/dehydratase complement(220085..221131) Rhizobium leguminosarum bv. trifolii WSM1325 8015412 YP_002974060.1 CDS Rleg_0210 NC_012850.1 221486 222634 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_PE00361 AraC family transcriptional regulator; AraC family transcriptional regulator 221486..222634 Rhizobium leguminosarum bv. trifolii WSM1325 8011437 YP_002974061.1 CDS Rleg_0211 NC_012850.1 222795 223073 R KEGG: ret:RHE_CH00530 hypothetical protein; hypothetical protein complement(222795..223073) Rhizobium leguminosarum bv. trifolii WSM1325 8011438 YP_002974062.1 CDS Rleg_0212 NC_012850.1 223497 223877 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH00531 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 223497..223877 Rhizobium leguminosarum bv. trifolii WSM1325 8011439 YP_002974063.1 CDS Rleg_0213 NC_012850.1 224243 224782 R KEGG: ecl:EcolC_3640 transposase IS4 family protein; hypothetical protein complement(224243..224782) Rhizobium leguminosarum bv. trifolii WSM1325 8011440 YP_002974064.1 CDS Rleg_0214 NC_012850.1 224903 226894 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH00532 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(224903..226894) Rhizobium leguminosarum bv. trifolii WSM1325 8011441 YP_002974065.1 CDS Rleg_0215 NC_012850.1 227472 228347 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rec:RHECIAT_CH0000603 probable amino acid ABC transporter, substrate-binding protein; family 3 extracellular solute-binding protein 227472..228347 Rhizobium leguminosarum bv. trifolii WSM1325 8011442 YP_002974066.1 CDS Rleg_0216 NC_012850.1 228380 228793 R KEGG: ret:RHE_CH00534 hypothetical protein; hypothetical protein complement(228380..228793) Rhizobium leguminosarum bv. trifolii WSM1325 8011443 YP_002974067.1 CDS Rleg_0217 NC_012850.1 228896 229606 R KEGG: rec:RHECIAT_CH0000605 hypothetical protein; hypothetical protein complement(228896..229606) Rhizobium leguminosarum bv. trifolii WSM1325 8011444 YP_002974068.1 CDS Rleg_0218 NC_012850.1 229618 230295 R PFAM: peptidase S24 and S26 domain protein; KEGG: rec:RHECIAT_CH0000606 phage-related transcriptional regulator protein; phage repressor complement(229618..230295) Rhizobium leguminosarum bv. trifolii WSM1325 8011445 YP_002974069.1 CDS Rleg_0219 NC_012850.1 230418 231065 R PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rec:RHECIAT_CH0000607 probable two-component response regulator protein; LuxR family transcriptional regulator complement(230418..231065) Rhizobium leguminosarum bv. trifolii WSM1325 8015413 YP_002974070.1 CDS Rleg_0220 NC_012850.1 231158 231556 R KEGG: rec:RHECIAT_CH0000608 hypothetical protein; hypothetical protein complement(231158..231556) Rhizobium leguminosarum bv. trifolii WSM1325 8015414 YP_002974071.1 CDS Rleg_0221 NC_012850.1 231692 232045 D PFAM: protein of unknown function DUF952; KEGG: ret:RHE_CH00539 hypothetical protein; hypothetical protein 231692..232045 Rhizobium leguminosarum bv. trifolii WSM1325 8011446 YP_002974072.1 CDS Rleg_0222 NC_012850.1 232042 233130 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 232042..233130 Rhizobium leguminosarum bv. trifolii WSM1325 8011447 YP_002974073.1 CDS Rleg_0223 NC_012850.1 233106 234452 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ret:RHE_CH00541 DNA-damage-inducible F protein (Na+ driven multidrug efflux pump); MATE efflux family protein complement(233106..234452) Rhizobium leguminosarum bv. trifolii WSM1325 8011448 YP_002974074.1 CDS Rleg_0224 NC_012850.1 234538 235035 R PFAM: SCP-like extracellular; KEGG: rec:RHECIAT_CH0000612 hypothetical protein; hypothetical protein complement(234538..235035) Rhizobium leguminosarum bv. trifolii WSM1325 8011449 YP_002974075.1 CDS Rleg_0225 NC_012850.1 235037 235303 R KEGG: rec:RHECIAT_CH0000613 hypothetical protein; hypothetical protein complement(235037..235303) Rhizobium leguminosarum bv. trifolii WSM1325 8015415 YP_002974076.1 CDS Rleg_0226 NC_012850.1 235505 236440 D PFAM: methyltransferase type 12; TPR repeat-containing protein; tetratricopeptide TPR_2 repeat protein; KEGG: rec:RHECIAT_CH0000614 probable methyltransferase protein; type 12 methyltransferase 235505..236440 Rhizobium leguminosarum bv. trifolii WSM1325 8011450 YP_002974077.1 CDS Rleg_0227 NC_012850.1 236652 237287 D PFAM: protein of unknown function DUF161; KEGG: ret:RHE_CH00545 hypothetical protein; hypothetical protein 236652..237287 Rhizobium leguminosarum bv. trifolii WSM1325 8011451 YP_002974078.1 CDS Rleg_0228 NC_012850.1 237441 237608 D hypothetical protein 237441..237608 Rhizobium leguminosarum bv. trifolii WSM1325 8011452 YP_002974079.1 CDS Rleg_0229 NC_012850.1 237674 238135 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: rec:RHECIAT_CH0000617 hypothetical protein; alkylhydroperoxidase complement(237674..238135) Rhizobium leguminosarum bv. trifolii WSM1325 8011453 YP_002974080.1 CDS Rleg_0230 NC_012850.1 238158 238658 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; hypothetical protein; KEGG: rec:RHECIAT_CH0000618 transcriptional regulator protein; BadM/Rrf2 family transcriptional regulator complement(238158..238658) Rhizobium leguminosarum bv. trifolii WSM1325 8011454 YP_002974081.1 CDS Rleg_0231 NC_012850.1 238791 239423 D PFAM: protein of unknown function DUF161; KEGG: rec:RHECIAT_CH0000619 hypothetical protein; hypothetical protein 238791..239423 Rhizobium leguminosarum bv. trifolii WSM1325 8011455 YP_002974082.1 CDS Rleg_0232 NC_012850.1 239420 241981 D PFAM: DEAD/DEAH box helicase; DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: rec:RHECIAT_CH0000620 ATP-dependent RNA/DNA helicase protein; DEAD/DEAH box helicase 239420..241981 Rhizobium leguminosarum bv. trifolii WSM1325 8011456 YP_002974083.1 CDS Rleg_0233 NC_012850.1 242024 242749 D PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0000621 phosphoesterase protein; metallophosphoesterase 242024..242749 Rhizobium leguminosarum bv. trifolii WSM1325 8011457 YP_002974084.1 CDS Rleg_0234 NC_012850.1 242782 243363 R KEGG: ret:RHE_CH00551 hypothetical protein; hypothetical protein complement(242782..243363) Rhizobium leguminosarum bv. trifolii WSM1325 8011458 YP_002974085.1 CDS Rleg_0235 NC_012850.1 243512 244069 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_CH0000623 dihydrofolate reductase protein; bifunctional deaminase-reductase domain-containing protein complement(243512..244069) Rhizobium leguminosarum bv. trifolii WSM1325 8011459 YP_002974086.1 CDS Rleg_0236 NC_012850.1 244271 245071 R KEGG: rec:RHECIAT_CH0000624 hypothetical protein; hypothetical protein complement(244271..245071) Rhizobium leguminosarum bv. trifolii WSM1325 8015416 YP_002974087.1 CDS Rleg_0237 NC_012850.1 245071 245994 R PFAM: protein of unknown function DUF81; KEGG: ret:RHE_CH00554 permease protein; hypothetical protein complement(245071..245994) Rhizobium leguminosarum bv. trifolii WSM1325 8011460 YP_002974088.1 CDS Rleg_0238 NC_012850.1 246309 250100 R PFAM: peptidoglycan-binding domain 1 protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: rec:RHECIAT_CH0000627 hemaglutinin protein; peptidoglycan-binding domain 1 protein complement(246309..250100) Rhizobium leguminosarum bv. trifolii WSM1325 8011461 YP_002974089.1 CDS Rleg_0239 NC_012850.1 250427 250792 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0000628 lactoylglutathione lyase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(250427..250792) Rhizobium leguminosarum bv. trifolii WSM1325 8011462 YP_002974090.1 CDS Rleg_0240 NC_012850.1 250879 251580 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr7900 nodulation protein; short-chain dehydrogenase/reductase SDR complement(250879..251580) Rhizobium leguminosarum bv. trifolii WSM1325 8011463 YP_002974091.1 CDS Rleg_0241 NC_012850.1 251851 253647 D PFAM: acyl-CoA dehydrogenase; KEGG: rec:RHECIAT_CH0000630 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase 251851..253647 Rhizobium leguminosarum bv. trifolii WSM1325 8015417 YP_002974092.1 CDS Rleg_0242 NC_012850.1 253787 254995 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 253787..254995 Rhizobium leguminosarum bv. trifolii WSM1325 8015418 YP_002974093.1 CDS Rleg_0243 NC_012850.1 254998 255381 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bac:BamMC406_6039 cupin 2 domain-containing protein; cupin 254998..255381 Rhizobium leguminosarum bv. trifolii WSM1325 8011464 YP_002974094.1 CDS Rleg_0244 NC_012850.1 255398 257611 D PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase; KEGG: ret:RHE_CH00559 enoyl-CoA hydratase protein; 3-hydroxyacyl-CoA dehydrogenase 255398..257611 Rhizobium leguminosarum bv. trifolii WSM1325 8011465 YP_002974095.1 CDS Rleg_0245 NC_012850.1 257728 258291 D KEGG: mxa:MXAN_3660 hypothetical protein; hypothetical protein 257728..258291 Rhizobium leguminosarum bv. trifolii WSM1325 8011466 YP_002974096.1 CDS Rleg_0246 NC_012850.1 258573 258782 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rec:RHECIAT_CH0000633 cold shock protein; cold-shock protein 258573..258782 Rhizobium leguminosarum bv. trifolii WSM1325 8011467 YP_002974097.1 CDS Rleg_0247 NC_012850.1 258973 259407 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0000634 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator complement(258973..259407) Rhizobium leguminosarum bv. trifolii WSM1325 8011468 YP_002974098.1 CDS Rleg_0248 NC_012850.1 259523 259927 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH00562 hypothetical protein; glutathione-dependent formaldehyde-activating protein 259523..259927 Rhizobium leguminosarum bv. trifolii WSM1325 8011469 YP_002974099.1 CDS Rleg_0249 NC_012850.1 260021 260464 D KEGG: rec:RHECIAT_CH0000636 hypothetical protein; hypothetical protein 260021..260464 Rhizobium leguminosarum bv. trifolii WSM1325 8011470 YP_002974100.1 CDS Rleg_0250 NC_012850.1 260474 261676 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0000637 probable transporter, permease protein; major facilitator superfamily protein complement(260474..261676) Rhizobium leguminosarum bv. trifolii WSM1325 8011471 YP_002974101.1 CDS Rleg_0251 NC_012850.1 261814 262371 D PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0000638 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 261814..262371 Rhizobium leguminosarum bv. trifolii WSM1325 8011472 YP_002974102.1 CDS Rleg_0252 NC_012850.1 262483 266007 R PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: ret:RHE_CH00566 two-component sensor histidine kinase/response regulator hybrid protein; PAS/PAC sensor hybrid histidine kinase complement(262483..266007) Rhizobium leguminosarum bv. trifolii WSM1325 8011473 YP_002974103.1 CDS mscL NC_012850.1 266230 266667 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 266230..266667 Rhizobium leguminosarum bv. trifolii WSM1325 8011474 YP_002974104.1 CDS Rleg_0254 NC_012850.1 266790 267956 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 266790..267956 Rhizobium leguminosarum bv. trifolii WSM1325 8011475 YP_002974105.1 CDS Rleg_0255 NC_012850.1 268177 269211 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH00569 UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase 268177..269211 Rhizobium leguminosarum bv. trifolii WSM1325 8011476 YP_002974106.1 CDS Rleg_0256 NC_012850.1 269319 271280 D KEGG: rec:RHECIAT_CH0000643 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 269319..271280 Rhizobium leguminosarum bv. trifolii WSM1325 8011477 YP_002974107.1 CDS Rleg_0257 NC_012850.1 271364 272416 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 271364..272416 Rhizobium leguminosarum bv. trifolii WSM1325 8011478 YP_002974108.1 CDS Rleg_0258 NC_012850.1 272428 274485 R PFAM: UvrD/REP helicase; KEGG: rec:RHECIAT_CH0000646 ATP-dependent DNA helicase protein; UvrD/REP helicase complement(272428..274485) Rhizobium leguminosarum bv. trifolii WSM1325 8011479 YP_002974109.1 CDS Rleg_0259 NC_012850.1 274593 274859 R KEGG: ret:RHE_CH00574 hypothetical protein; hypothetical protein complement(274593..274859) Rhizobium leguminosarum bv. trifolii WSM1325 8011480 YP_002974110.1 CDS Rleg_0260 NC_012850.1 275038 275298 D PFAM: transport-associated; KEGG: rec:RHECIAT_CH0000648 hypothetical protein; transport-associated 275038..275298 Rhizobium leguminosarum bv. trifolii WSM1325 8011481 YP_002974111.1 CDS Rleg_0261 NC_012850.1 275390 275653 D KEGG: rec:RHECIAT_CH0000649 hypothetical protein; hypothetical protein 275390..275653 Rhizobium leguminosarum bv. trifolii WSM1325 8015419 YP_002974112.1 CDS Rleg_0262 NC_012850.1 275920 276162 R PFAM: protein of unknown function DUF982; KEGG: ret:RHE_CH00575 hypothetical protein; hypothetical protein complement(275920..276162) Rhizobium leguminosarum bv. trifolii WSM1325 8015420 YP_002974113.1 CDS Rleg_0263 NC_012850.1 276526 276888 D KEGG: rec:RHECIAT_CH0000651 hypothetical protein; hypothetical protein 276526..276888 Rhizobium leguminosarum bv. trifolii WSM1325 8011482 YP_002974114.1 CDS Rleg_0264 NC_012850.1 277162 277356 D KEGG: rec:RHECIAT_CH0000653 hypothetical protein; hypothetical protein 277162..277356 Rhizobium leguminosarum bv. trifolii WSM1325 8015421 YP_002974115.1 CDS Rleg_0265 NC_012850.1 277464 278756 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 277464..278756 Rhizobium leguminosarum bv. trifolii WSM1325 8011484 YP_002974116.1 CDS Rleg_0266 NC_012850.1 278865 279296 D KEGG: rec:RHECIAT_CH0000655 hypothetical protein; hypothetical protein 278865..279296 Rhizobium leguminosarum bv. trifolii WSM1325 8011485 YP_002974117.1 CDS hisD NC_012850.1 279413 280711 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 279413..280711 Rhizobium leguminosarum bv. trifolii WSM1325 8011486 YP_002974118.1 CDS Rleg_0268 NC_012850.1 280716 281189 D PFAM: conserved hypothetical protein; KEGG: ret:RHE_CH00582 hypothetical protein; hypothetical protein 280716..281189 Rhizobium leguminosarum bv. trifolii WSM1325 8011487 YP_002974119.1 CDS Rleg_0269 NC_012850.1 281195 281671 D SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: rec:RHECIAT_CH0000658 arsenate reductase (phosphatase) protein; protein-tyrosine phosphatase, low molecular weight 281195..281671 Rhizobium leguminosarum bv. trifolii WSM1325 8011488 YP_002974120.1 CDS infA NC_012850.1 281795 282013 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 281795..282013 Rhizobium leguminosarum bv. trifolii WSM1325 8011489 YP_002974121.1 CDS Rleg_0271 NC_012850.1 282071 282691 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 282071..282691 Rhizobium leguminosarum bv. trifolii WSM1325 8011490 YP_002974122.1 CDS Rleg_0272 NC_012850.1 282827 283039 D PFAM: protein of unknown function DUF329; KEGG: rec:RHECIAT_CH0000661 hypothetical protein; zinc-binding protein 282827..283039 Rhizobium leguminosarum bv. trifolii WSM1325 8011491 YP_002974123.1 CDS Rleg_0273 NC_012850.1 283679 284026 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sme:SMc00089 hypothetical protein; XRE family transcriptional regulator 283679..284026 Rhizobium leguminosarum bv. trifolii WSM1325 8011493 YP_002974124.1 CDS Rleg_0274 NC_012850.1 284185 284463 R PFAM: transposase IS3/IS911 family protein; KEGG: gdj:Gdia_2654 transposase IS3 family protein; transposase IS3/IS911 family protein complement(284185..284463) Rhizobium leguminosarum bv. trifolii WSM1325 8011494 YP_002974125.1 CDS Rleg_0275 NC_012850.1 284471 285916 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0000667 protein secretion protein, HlyD family; HlyD family type I secretion membrane fusion protein complement(284471..285916) Rhizobium leguminosarum bv. trifolii WSM1325 8011495 YP_002974126.1 CDS Rleg_0276 NC_012850.1 285931 287646 R KEGG: rec:RHECIAT_CH0000668 protein ABC transporter protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; SMART: AAA ATPase; type I secretion system ATPase complement(285931..287646) Rhizobium leguminosarum bv. trifolii WSM1325 8011496 YP_002974127.1 CDS Rleg_0277 NC_012850.1 287737 288312 R KEGG: rec:RHECIAT_CH0000669 hypothetical protein; hypothetical protein complement(287737..288312) Rhizobium leguminosarum bv. trifolii WSM1325 8011497 YP_002974128.1 CDS Rleg_0278 NC_012850.1 288902 289996 D KEGG: rec:RHECIAT_CH0000670 hypothetical protein; hypothetical protein 288902..289996 Rhizobium leguminosarum bv. trifolii WSM1325 8015422 YP_002974129.1 CDS Rleg_0279 NC_012850.1 290404 290673 R hypothetical protein complement(290404..290673) Rhizobium leguminosarum bv. trifolii WSM1325 8011498 YP_002974130.1 CDS Rleg_0280 NC_012850.1 290862 291599 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rec:RHECIAT_CH0000671 transcriptional regulator protein, LuxR family; LuxR family transcriptional regulator 290862..291599 Rhizobium leguminosarum bv. trifolii WSM1325 8011499 YP_002974131.1 CDS Rleg_0281 NC_012850.1 291725 291976 D KEGG: hypothetical protein; hypothetical protein 291725..291976 Rhizobium leguminosarum bv. trifolii WSM1325 8011500 YP_002974132.1 CDS Rleg_0282 NC_012850.1 291980 292705 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(291980..292705) Rhizobium leguminosarum bv. trifolii WSM1325 8011501 YP_002974133.1 CDS Rleg_0283 NC_012850.1 292717 293778 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsq:Rsph17025_3579 hypothetical protein; ABC transporter complement(292717..293778) Rhizobium leguminosarum bv. trifolii WSM1325 8015423 YP_002974134.1 CDS Rleg_0284 NC_012850.1 293839 294045 R KEGG: rsq:Rsph17025_3581 hypothetical protein; hypothetical protein complement(293839..294045) Rhizobium leguminosarum bv. trifolii WSM1325 8015424 YP_002974135.1 CDS Rleg_0285 NC_012850.1 294050 294889 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsq:Rsph17025_3582 hypothetical protein; ABC transporter permease complement(294050..294889) Rhizobium leguminosarum bv. trifolii WSM1325 8011502 YP_002974136.1 CDS Rleg_0286 NC_012850.1 294894 295769 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; ABC transporter permease complement(294894..295769) Rhizobium leguminosarum bv. trifolii WSM1325 8011503 YP_002974137.1 CDS Rleg_0287 NC_012850.1 295867 297300 R PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter; extracellular solute-binding protein complement(295867..297300) Rhizobium leguminosarum bv. trifolii WSM1325 8011504 YP_002974138.1 CDS Rleg_0288 NC_012850.1 297598 298482 D PFAM: xylose isomerase; KEGG: xylose isomerase protein; xylose isomerase 297598..298482 Rhizobium leguminosarum bv. trifolii WSM1325 8011505 YP_002974139.1 CDS Rleg_0289 NC_012850.1 298545 299759 D PFAM: ROK family protein; KEGG: transcription regulator protein; ROK family protein 298545..299759 Rhizobium leguminosarum bv. trifolii WSM1325 8011506 YP_002974140.1 CDS Rleg_0290 NC_012850.1 299790 300767 D PFAM: PfkB domain protein; KEGG: fructokinase ; K00847 fructokinase; PfkB domain-containing protein 299790..300767 Rhizobium leguminosarum bv. trifolii WSM1325 8011507 YP_002974141.1 CDS Rleg_0291 NC_012850.1 300767 302044 D PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; D-tagatose-bisphosphate aldolase class II accessory protein AgaZ 300767..302044 Rhizobium leguminosarum bv. trifolii WSM1325 8015425 YP_002974142.1 CDS Rleg_0292 NC_012850.1 302075 302800 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ribitol 2-dehydrogenase; short-chain dehydrogenase/reductase SDR 302075..302800 Rhizobium leguminosarum bv. trifolii WSM1325 8011508 YP_002974143.1 CDS Rleg_0293 NC_012850.1 302812 303585 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02339 oxidoreductase protein; short-chain dehydrogenase/reductase SDR 302812..303585 Rhizobium leguminosarum bv. trifolii WSM1325 8011509 YP_002974144.1 CDS Rleg_0294 NC_012850.1 303723 304547 D PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: aldolase protein ; K01623 fructose-bisphosphate aldolase, class I; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 303723..304547 Rhizobium leguminosarum bv. trifolii WSM1325 8015426 YP_002974145.1 CDS Rleg_0295 NC_012850.1 304570 305724 D PFAM: oxidoreductase domain protein; KEGG: thuBf; myo-inositol 2-dehydrogenase protein; oxidoreductase domain-containing protein 304570..305724 Rhizobium leguminosarum bv. trifolii WSM1325 8011510 YP_002974146.1 CDS Rleg_0296 NC_012850.1 305724 306395 D PFAM: protein of unknown function DUF1498; KEGG: hypothetical protein ; K09988 hypothetical protein; hypothetical protein 305724..306395 Rhizobium leguminosarum bv. trifolii WSM1325 8011511 YP_002974147.1 CDS Rleg_0297 NC_012850.1 306395 307453 D PFAM: PfkB domain protein; KEGG: iolC; myo-inositol catabolism; PfkB domain-containing protein 306395..307453 Rhizobium leguminosarum bv. trifolii WSM1325 8011512 YP_002974148.1 CDS Rleg_0298 NC_012850.1 307589 308377 D Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 307589..308377 Rhizobium leguminosarum bv. trifolii WSM1325 8011513 YP_002974149.1 CDS Rleg_0299 NC_012850.1 308435 309445 D PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: L-iditol 2-dehydrogenase protein; alcohol dehydrogenase GroES domain protein 308435..309445 Rhizobium leguminosarum bv. trifolii WSM1325 8011514 YP_002974150.1 CDS Rleg_0300 NC_012850.1 309461 310480 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: transcriptional regulator protein ; K02529 LacI family transcriptional regulator; LacI family transcriptional regulator complement(309461..310480) Rhizobium leguminosarum bv. trifolii WSM1325 8011515 YP_002974151.1 CDS Rleg_0301 NC_012850.1 310730 311380 D KEGG: ots:OTBS_0057 hypothetical protein; hypothetical protein 310730..311380 Rhizobium leguminosarum bv. trifolii WSM1325 8011516 YP_002974152.1 CDS Rleg_0302 NC_012850.1 311455 312600 D KEGG: ret:RHE_CH00615 polysaccharidase protein; polysaccharidase protein 311455..312600 Rhizobium leguminosarum bv. trifolii WSM1325 8011517 YP_002974153.1 CDS Rleg_0303 NC_012850.1 312632 313738 R PFAM: acyltransferase; KEGG: cak:Caul_4545 acyltransferase; acyltransferase complement(312632..313738) Rhizobium leguminosarum bv. trifolii WSM1325 8011518 YP_002974154.1 CDS Rleg_0304 NC_012850.1 313725 315080 R PFAM: O-antigen polymerase; KEGG: rec:RHECIAT_CH0003464 exopolysaccharide production protein; O-antigen polymerase complement(313725..315080) Rhizobium leguminosarum bv. trifolii WSM1325 8011519 YP_002974155.1 CDS Rleg_0305 NC_012850.1 315124 315858 R KEGG: si:ch211-139a5.3; hypothetical protein complement(315124..315858) Rhizobium leguminosarum bv. trifolii WSM1325 8011520 YP_002974156.1 CDS Rleg_0306 NC_012850.1 316093 316899 D KEGG: rec:RHECIAT_CH0000691 DNA helicase protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 316093..316899 Rhizobium leguminosarum bv. trifolii WSM1325 8011521 YP_002974157.1 CDS Rleg_0307 NC_012850.1 317078 317932 R KEGG: rec:RHECIAT_CH0000693 DNA helicase protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein complement(317078..317932) Rhizobium leguminosarum bv. trifolii WSM1325 8011522 YP_002974158.1 CDS Rleg_0308 NC_012850.1 317950 318183 R KEGG: rec:RHECIAT_CH0000694 hypothetical protein; hypothetical protein complement(317950..318183) Rhizobium leguminosarum bv. trifolii WSM1325 8011523 YP_002974159.1 CDS Rleg_0309 NC_012850.1 318230 318490 R KEGG: ret:RHE_CH00619 hypothetical protein; hypothetical protein complement(318230..318490) Rhizobium leguminosarum bv. trifolii WSM1325 8011524 YP_002974160.1 CDS Rleg_0310 NC_012850.1 318636 319196 D PFAM: OsmC family protein; KEGG: rec:RHECIAT_CH0000696 stress-induced protein; OsmC family protein 318636..319196 Rhizobium leguminosarum bv. trifolii WSM1325 8011525 YP_002974161.1 CDS Rleg_0311 NC_012850.1 319168 320604 D KEGG: rec:RHECIAT_CH0000697 FAD-dependent oxidoreductase protein; FAD-dependent oxidoreductase protein 319168..320604 Rhizobium leguminosarum bv. trifolii WSM1325 8011526 YP_002974162.1 CDS Rleg_0312 NC_012850.1 320820 321725 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0000698 transporter permease protein; hypothetical protein 320820..321725 Rhizobium leguminosarum bv. trifolii WSM1325 8011527 YP_002974163.1 CDS Rleg_0313 NC_012850.1 321738 323294 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; phospholipase/carboxylesterase; KEGG: rec:RHECIAT_CH0000699 glyoxalase/bleomycin resistance protein/dioxygenase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(321738..323294) Rhizobium leguminosarum bv. trifolii WSM1325 8011528 YP_002974164.1 CDS Rleg_0314 NC_012850.1 323379 324974 R PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: rec:RHECIAT_CH0000700 probable two-component sensor histidine kinase/response regulator hybrid protein; histidine kinase complement(323379..324974) Rhizobium leguminosarum bv. trifolii WSM1325 8011529 YP_002974165.1 CDS Rleg_0315 NC_012850.1 324979 325404 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0000701 probable two-component response regulator protein; response regulator receiver protein complement(324979..325404) Rhizobium leguminosarum bv. trifolii WSM1325 8011530 YP_002974166.1 CDS Rleg_0316 NC_012850.1 325391 327532 R KEGG: rec:RHECIAT_CH0000702 probable two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(325391..327532) Rhizobium leguminosarum bv. trifolii WSM1325 8011531 YP_002974167.1 CDS Rleg_0317 NC_012850.1 327726 328103 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0000703 two-component response regulator protein; response regulator receiver protein 327726..328103 Rhizobium leguminosarum bv. trifolii WSM1325 8011532 YP_002974168.1 CDS Rleg_0318 NC_012850.1 328584 329288 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: ret:RHE_CH00628 LuxR family transcriptional regulator; LuxR family transcriptional regulator 328584..329288 Rhizobium leguminosarum bv. trifolii WSM1325 8011533 YP_002974169.1 CDS Rleg_0319 NC_012850.1 329319 329756 D KEGG: rec:RHECIAT_CH0000705 two-component response regulator protein; response regulator receiver protein 329319..329756 Rhizobium leguminosarum bv. trifolii WSM1325 8011534 YP_002974170.1 CDS Rleg_0320 NC_012850.1 329760 330476 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH00630 two-component sensor histidine kinase protein; histidine kinase complement(329760..330476) Rhizobium leguminosarum bv. trifolii WSM1325 8011535 YP_002974171.1 CDS Rleg_0321 NC_012850.1 330635 333181 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF complement(330635..333181) Rhizobium leguminosarum bv. trifolii WSM1325 8015427 YP_002974172.1 CDS Rleg_0322 NC_012850.1 333265 333645 R KEGG: rec:RHECIAT_CH0000708 hypothetical protein; hypothetical protein complement(333265..333645) Rhizobium leguminosarum bv. trifolii WSM1325 8011536 YP_002974173.1 CDS Rleg_0323 NC_012850.1 333700 335520 R PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: ret:RHE_CH00633 potassium-efflux system protein; sodium/hydrogen exchanger complement(333700..335520) Rhizobium leguminosarum bv. trifolii WSM1325 8011537 YP_002974174.1 CDS Rleg_0324 NC_012850.1 335555 335854 D KEGG: ret:RHE_CH00634 hypothetical protein; hypothetical protein 335555..335854 Rhizobium leguminosarum bv. trifolii WSM1325 8015428 YP_002974175.1 CDS Rleg_0325 NC_012850.1 335936 337357 R KEGG: ret:RHE_CH00635 glycosyltransferase protein; glycosyltransferase complement(335936..337357) Rhizobium leguminosarum bv. trifolii WSM1325 8011538 YP_002974176.1 CDS Rleg_0326 NC_012850.1 337641 337754 R hypothetical protein complement(337641..337754) Rhizobium leguminosarum bv. trifolii WSM1325 8011539 YP_002974177.1 CDS Rleg_0327 NC_012850.1 338186 339820 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: rec:RHECIAT_CH0000713 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 338186..339820 Rhizobium leguminosarum bv. trifolii WSM1325 8011540 YP_002974178.1 CDS Rleg_0328 NC_012850.1 339884 340180 D KEGG: rec:RHECIAT_CH0000714 chemotaxis protein CheX; chemotaxis protein CheX 339884..340180 Rhizobium leguminosarum bv. trifolii WSM1325 8011541 YP_002974179.1 CDS Rleg_0329 NC_012850.1 340177 340542 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0000715 chemotaxis two-component response regulator protein; response regulator receiver protein 340177..340542 Rhizobium leguminosarum bv. trifolii WSM1325 8011542 YP_002974180.1 CDS Rleg_0330 NC_012850.1 340560 342836 D KEGG: rec:RHECIAT_CH0000716 chemotaxis two-component sensor histidine kinase protein; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheA signal transduction histidine kinase 340560..342836 Rhizobium leguminosarum bv. trifolii WSM1325 8011543 YP_002974181.1 CDS Rleg_0331 NC_012850.1 342841 343308 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rec:RHECIAT_CH0000717 chemotaxis signal transduction protein; CheW protein 342841..343308 Rhizobium leguminosarum bv. trifolii WSM1325 8011544 YP_002974182.1 CDS Rleg_0332 NC_012850.1 343305 344213 D KEGG: rec:RHECIAT_CH0000718 methyl-accepting chemotaxis protein O-methyltransferase protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 343305..344213 Rhizobium leguminosarum bv. trifolii WSM1325 8011545 YP_002974183.1 CDS Rleg_0333 NC_012850.1 344210 345253 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 344210..345253 Rhizobium leguminosarum bv. trifolii WSM1325 8015429 YP_002974184.1 CDS Rleg_0334 NC_012850.1 345254 345643 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0000720 chemotaxis two-component response regulator protein; response regulator receiver protein 345254..345643 Rhizobium leguminosarum bv. trifolii WSM1325 8011546 YP_002974185.1 CDS Rleg_0335 NC_012850.1 345640 346194 D catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 345640..346194 Rhizobium leguminosarum bv. trifolii WSM1325 8011547 YP_002974186.1 CDS Rleg_0336 NC_012850.1 346211 346600 D KEGG: ret:RHE_CH00645 hypothetical protein; hypothetical protein 346211..346600 Rhizobium leguminosarum bv. trifolii WSM1325 8015430 YP_002974187.1 CDS fliF NC_012850.1 346810 348501 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 346810..348501 Rhizobium leguminosarum bv. trifolii WSM1325 8011548 YP_002974188.1 CDS Rleg_0338 NC_012850.1 348947 349693 D PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: rec:RHECIAT_CH0000724 probable transcriptional regulator protein, LuxR family; LuxR family transcriptional regulator 348947..349693 Rhizobium leguminosarum bv. trifolii WSM1325 8015431 YP_002974189.1 CDS Rleg_0339 NC_012850.1 349702 350448 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rec:RHECIAT_CH0000725 probable transcriptional regulator protein, LuxR family; LuxR family transcriptional regulator 349702..350448 Rhizobium leguminosarum bv. trifolii WSM1325 8011549 YP_002974190.1 CDS Rleg_0340 NC_012850.1 350561 351004 R KEGG: rec:RHECIAT_CH0000726 hypothetical protein; hypothetical protein complement(350561..351004) Rhizobium leguminosarum bv. trifolii WSM1325 8011550 YP_002974191.1 CDS flhB NC_012850.1 351010 352089 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(351010..352089) Rhizobium leguminosarum bv. trifolii WSM1325 8011551 YP_002974192.1 CDS fliG NC_012850.1 352426 353466 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(352426..353466) Rhizobium leguminosarum bv. trifolii WSM1325 8011552 YP_002974193.1 CDS Rleg_0343 NC_012850.1 353495 354079 R TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rec:RHECIAT_CH0000729 flagellar motor switch protein; flagellar motor switch protein FliN complement(353495..354079) Rhizobium leguminosarum bv. trifolii WSM1325 8011553 YP_002974194.1 CDS Rleg_0344 NC_012850.1 354145 355095 R PFAM: surface presentation of antigens (SPOA) protein; KEGG: rec:RHECIAT_CH0000730 flagellar C-ring motor switch protein; surface presentation of antigens (SPOA) protein complement(354145..355095) Rhizobium leguminosarum bv. trifolii WSM1325 8011554 YP_002974195.1 CDS Rleg_0345 NC_012850.1 355096 355968 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(355096..355968) Rhizobium leguminosarum bv. trifolii WSM1325 8015432 YP_002974196.1 CDS flgF NC_012850.1 356223 356957 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgF 356223..356957 Rhizobium leguminosarum bv. trifolii WSM1325 8011555 YP_002974197.1 CDS fliI NC_012850.1 357077 358477 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 357077..358477 Rhizobium leguminosarum bv. trifolii WSM1325 8011556 YP_002974198.1 CDS Rleg_0348 NC_012850.1 358480 359022 D KEGG: ret:RHE_CH00657 hypothetical protein; hypothetical protein 358480..359022 Rhizobium leguminosarum bv. trifolii WSM1325 8015433 YP_002974199.1 CDS flgB NC_012850.1 359289 359681 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 359289..359681 Rhizobium leguminosarum bv. trifolii WSM1325 8011557 YP_002974200.1 CDS flgC NC_012850.1 359686 360102 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 359686..360102 Rhizobium leguminosarum bv. trifolii WSM1325 8011558 YP_002974201.1 CDS fliE NC_012850.1 360105 360446 D forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar hook-basal body protein FliE 360105..360446 Rhizobium leguminosarum bv. trifolii WSM1325 8011559 YP_002974202.1 CDS flgG NC_012850.1 360466 361254 D makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 360466..361254 Rhizobium leguminosarum bv. trifolii WSM1325 8011560 YP_002974203.1 CDS flgA NC_012850.1 361271 361753 D required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body P-ring biosynthesis protein FlgA 361271..361753 Rhizobium leguminosarum bv. trifolii WSM1325 8011561 YP_002974204.1 CDS flgI NC_012850.1 361750 362871 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 361750..362871 Rhizobium leguminosarum bv. trifolii WSM1325 8011562 YP_002974205.1 CDS Rleg_0355 NC_012850.1 362868 363410 D KEGG: rec:RHECIAT_CH0000741 exported flagella related protein; exported flagella-like protein 362868..363410 Rhizobium leguminosarum bv. trifolii WSM1325 8011563 YP_002974206.1 CDS flgH NC_012850.1 363407 364123 D part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 363407..364123 Rhizobium leguminosarum bv. trifolii WSM1325 8011564 YP_002974207.1 CDS Rleg_0357 NC_012850.1 364136 364642 D PFAM: flagellar basal body-associated protein FliL; KEGG: ret:RHE_CH00666 flagellar biosynthesis transmembrane protein; flagellar basal body-associated protein FliL 364136..364642 Rhizobium leguminosarum bv. trifolii WSM1325 8015434 YP_002974208.1 CDS fliP NC_012850.1 364639 365376 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 364639..365376 Rhizobium leguminosarum bv. trifolii WSM1325 8011565 YP_002974209.1 CDS Rleg_0359 NC_012850.1 365518 367491 R KEGG: rec:RHECIAT_CH0000745 hypothetical protein; hypothetical protein complement(365518..367491) Rhizobium leguminosarum bv. trifolii WSM1325 8011566 YP_002974210.1 CDS Rleg_0360 NC_012850.1 367922 368827 D PFAM: flagellin domain protein; KEGG: ret:RHE_CH00669 flagellin C protein; flagellin domain-containing protein 367922..368827 Rhizobium leguminosarum bv. trifolii WSM1325 8015435 YP_002974211.1 CDS Rleg_0361 NC_012850.1 369110 370018 D PFAM: flagellin domain protein; KEGG: rec:RHECIAT_CH0000748 flagellin C protein; flagellin domain-containing protein 369110..370018 Rhizobium leguminosarum bv. trifolii WSM1325 8011567 YP_002974212.1 CDS Rleg_0362 NC_012850.1 370266 371177 D PFAM: flagellin domain protein; KEGG: ret:RHE_CH00671 flagellin C protein; flagellin domain-containing protein 370266..371177 Rhizobium leguminosarum bv. trifolii WSM1325 8011568 YP_002974213.1 CDS Rleg_0363 NC_012850.1 371478 372440 D PFAM: flagellin domain protein; KEGG: rec:RHECIAT_CH0000750 flagellin C protein; flagellin domain-containing protein 371478..372440 Rhizobium leguminosarum bv. trifolii WSM1325 8011569 YP_002974214.1 CDS Rleg_0364 NC_012850.1 372644 373273 D KEGG: rec:RHECIAT_CH0000751 hypothetical protein; hypothetical protein 372644..373273 Rhizobium leguminosarum bv. trifolii WSM1325 8011570 YP_002974215.1 CDS motB NC_012850.1 373270 374601 D with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 373270..374601 Rhizobium leguminosarum bv. trifolii WSM1325 8011571 YP_002974216.1 CDS Rleg_0366 NC_012850.1 374606 375901 D a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation; chemotaxis protein 374606..375901 Rhizobium leguminosarum bv. trifolii WSM1325 8011572 YP_002974217.1 CDS Rleg_0367 NC_012850.1 375898 377331 D KEGG: rec:RHECIAT_CH0000754 chemotaxis motility protein; chemotaxis motility protein 375898..377331 Rhizobium leguminosarum bv. trifolii WSM1325 8011573 YP_002974218.1 CDS Rleg_0368 NC_012850.1 377279 377836 D PFAM: Lytic transglycosylase catalytic; KEGG: ret:RHE_CH00677 hypothetical protein; lytic transglycosylase 377279..377836 Rhizobium leguminosarum bv. trifolii WSM1325 8011574 YP_002974219.1 CDS Rleg_0369 NC_012850.1 378117 378788 D PFAM: transcriptional regulator domain protein; KEGG: ret:RHE_CH00678 two-component response regulator protein; transcriptional regulator 378117..378788 Rhizobium leguminosarum bv. trifolii WSM1325 8011575 YP_002974220.1 CDS flgE NC_012850.1 378912 380210 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 378912..380210 Rhizobium leguminosarum bv. trifolii WSM1325 8011576 YP_002974221.1 CDS flgK NC_012850.1 380230 381717 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 380230..381717 Rhizobium leguminosarum bv. trifolii WSM1325 8011577 YP_002974222.1 CDS flgL NC_012850.1 381721 382773 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 381721..382773 Rhizobium leguminosarum bv. trifolii WSM1325 8011578 YP_002974223.1 CDS flaF NC_012850.1 382808 383155 D acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 382808..383155 Rhizobium leguminosarum bv. trifolii WSM1325 8011579 YP_002974224.1 CDS flbT NC_012850.1 383152 383601 D post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 383152..383601 Rhizobium leguminosarum bv. trifolii WSM1325 8011580 YP_002974225.1 CDS flgD NC_012850.1 383592 384026 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 383592..384026 Rhizobium leguminosarum bv. trifolii WSM1325 8011581 YP_002974226.1 CDS fliQ NC_012850.1 384126 384392 D FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 384126..384392 Rhizobium leguminosarum bv. trifolii WSM1325 8011582 YP_002974227.1 CDS flhA NC_012850.1 384608 386695 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 384608..386695 Rhizobium leguminosarum bv. trifolii WSM1325 8011583 YP_002974228.1 CDS fliR NC_012850.1 386692 387444 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 386692..387444 Rhizobium leguminosarum bv. trifolii WSM1325 8011584 YP_002974229.1 CDS Rleg_0379 NC_012850.1 387452 387865 D KEGG: rec:RHECIAT_CH0000766 hypothetical protein; hypothetical protein 387452..387865 Rhizobium leguminosarum bv. trifolii WSM1325 8011585 YP_002974230.1 CDS Rleg_0380 NC_012850.1 387898 388461 D KEGG: rec:RHECIAT_CH0000767 hypothetical protein; hypothetical protein 387898..388461 Rhizobium leguminosarum bv. trifolii WSM1325 8015436 YP_002974231.1 CDS Rleg_0381 NC_012850.1 388586 388951 D KEGG: ret:RHE_CH00690 hypothetical protein; hypothetical protein 388586..388951 Rhizobium leguminosarum bv. trifolii WSM1325 8011586 YP_002974232.1 CDS Rleg_0382 NC_012850.1 388951 389490 D KEGG: ret:RHE_CH00691 hypothetical protein; hypothetical protein 388951..389490 Rhizobium leguminosarum bv. trifolii WSM1325 8011587 YP_002974233.1 CDS Rleg_0383 NC_012850.1 389782 390621 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rec:RHECIAT_CH0000770 N-acetyl mannosamine transferase protein; WecB/TagA/CpsF family glycosyl transferase 389782..390621 Rhizobium leguminosarum bv. trifolii WSM1325 8011588 YP_002974234.1 CDS Rleg_0384 NC_012850.1 390778 392550 D KEGG: rec:RHECIAT_CH0000771 succinoglycan biosynthesis transport protein; succinoglycan biosynthesis transport protein 390778..392550 Rhizobium leguminosarum bv. trifolii WSM1325 8011589 YP_002974235.1 CDS Rleg_0385 NC_012850.1 392669 393568 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 392669..393568 Rhizobium leguminosarum bv. trifolii WSM1325 8011590 YP_002974236.1 CDS Rleg_0386 NC_012850.1 393619 394644 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_CH0000773 transcriptional regulator protein, LacI family; LacI family transcriptional regulator complement(393619..394644) Rhizobium leguminosarum bv. trifolii WSM1325 8011591 YP_002974237.1 CDS Rleg_0387 NC_012850.1 394953 396314 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH00696 alpha-glucoside ABC transporter, substrate-binding protein; extracellular solute-binding protein 394953..396314 Rhizobium leguminosarum bv. trifolii WSM1325 8011592 YP_002974238.1 CDS Rleg_0388 NC_012850.1 396503 397516 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH00697 alpha-glucoside ABC transporter, permease protein; ABC transporter permease 396503..397516 Rhizobium leguminosarum bv. trifolii WSM1325 8011593 YP_002974239.1 CDS Rleg_0389 NC_012850.1 397518 398681 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000777 alpha-glucoside ABC transporter, permease protein; ABC transporter permease 397518..398681 Rhizobium leguminosarum bv. trifolii WSM1325 8011594 YP_002974240.1 CDS Rleg_0390 NC_012850.1 398715 400367 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ret:RHE_CH00699 alpha-glucosidase protein; alpha amylase 398715..400367 Rhizobium leguminosarum bv. trifolii WSM1325 8011595 YP_002974241.1 CDS Rleg_0391 NC_012850.1 400418 401506 D PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000779 alpha-glucoside ABC transporter, ATP-binding protein; ABC transporter 400418..401506 Rhizobium leguminosarum bv. trifolii WSM1325 8015437 YP_002974242.1 CDS Rleg_0392 NC_012850.1 401623 402036 D KEGG: rec:RHECIAT_CH0000780 hypothetical protein; hypothetical protein 401623..402036 Rhizobium leguminosarum bv. trifolii WSM1325 8011596 YP_002974243.1 CDS Rleg_0393 NC_012850.1 402117 403940 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(402117..403940) Rhizobium leguminosarum bv. trifolii WSM1325 8011597 YP_002974244.1 CDS Rleg_0394 NC_012850.1 404018 404716 R TIGRFAM: 6-phosphogluconolactonase; KEGG: rec:RHECIAT_CH0000784 6-phosphogluconolactonase protein; SNP /replace=G; 6-phosphogluconolactonase complement(404018..404716) Rhizobium leguminosarum bv. trifolii WSM1325 8011598 YP_002974245.1 CDS Rleg_0395 NC_012850.1 404727 406202 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(404727..406202) Rhizobium leguminosarum bv. trifolii WSM1325 8011599 YP_002974246.1 CDS Rleg_0396 NC_012850.1 406337 407635 R PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_CH00705 oxidoreductase protein; FAD dependent oxidoreductase complement(406337..407635) Rhizobium leguminosarum bv. trifolii WSM1325 8011600 YP_002974247.1 CDS Rleg_0397 NC_012850.1 407648 409084 R PFAM: glutamine synthetase catalytic region; KEGG: ret:RHE_CH00706 glutamine synthetase protein; glutamate--putrescine ligase complement(407648..409084) Rhizobium leguminosarum bv. trifolii WSM1325 8011601 YP_002974248.1 CDS Rleg_0398 NC_012850.1 409173 410393 D PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rec:RHECIAT_CH0000788 hypothetical protein; hypothetical protein 409173..410393 Rhizobium leguminosarum bv. trifolii WSM1325 8011602 YP_002974249.1 CDS Rleg_0399 NC_012850.1 410638 410781 D KEGG: hypothetical protein; hypothetical protein 410638..410781 Rhizobium leguminosarum bv. trifolii WSM1325 8011603 YP_002974250.1 CDS Rleg_0400 NC_012850.1 411095 413626 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0000790 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 411095..413626 Rhizobium leguminosarum bv. trifolii WSM1325 8011604 YP_002974251.1 CDS Rleg_0401 NC_012850.1 413858 415705 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH00709 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 413858..415705 Rhizobium leguminosarum bv. trifolii WSM1325 8011605 YP_002974252.1 CDS Rleg_0402 NC_012850.1 415678 415914 R KEGG: rec:RHECIAT_CH0000792 hypothetical protein; hypothetical protein complement(415678..415914) Rhizobium leguminosarum bv. trifolii WSM1325 8011606 YP_002974253.1 CDS Rleg_0403 NC_012850.1 416005 416874 D PFAM: regulatory protein LysR; KEGG: rec:RHECIAT_CH0000793 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 416005..416874 Rhizobium leguminosarum bv. trifolii WSM1325 8011607 YP_002974254.1 CDS Rleg_0404 NC_012850.1 417013 417249 R KEGG: rec:RHECIAT_CH0000794 hypothetical protein; hypothetical protein complement(417013..417249) Rhizobium leguminosarum bv. trifolii WSM1325 8015438 YP_002974255.1 CDS Rleg_0405 NC_012850.1 417271 418560 R TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: ret:RHE_CH00712 isocitrate lyase protein; isocitrate lyase complement(417271..418560) Rhizobium leguminosarum bv. trifolii WSM1325 8011608 YP_002974256.1 CDS Rleg_0406 NC_012850.1 418751 420160 D PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0000796 probable transcriptional regulator protein; XRE family transcriptional regulator 418751..420160 Rhizobium leguminosarum bv. trifolii WSM1325 8011609 YP_002974257.1 CDS Rleg_0407 NC_012850.1 420287 421384 D PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc00770 putrescine-binding periplasmic protein; extracellular solute-binding protein 420287..421384 Rhizobium leguminosarum bv. trifolii WSM1325 8011610 YP_002974258.1 CDS Rleg_0408 NC_012850.1 421498 422640 D KEGG: rec:RHECIAT_CH0000798 spermidine/putrescine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 421498..422640 Rhizobium leguminosarum bv. trifolii WSM1325 8011611 YP_002974259.1 CDS Rleg_0409 NC_012850.1 422645 423556 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH00716 spermidine/putrescine ABC transporter, permease component I protein; ABC transporter permease 422645..423556 Rhizobium leguminosarum bv. trifolii WSM1325 8015439 YP_002974260.1 CDS Rleg_0410 NC_012850.1 423560 424378 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000800 spermidine/putrescine ABC transporter, permease component II protein; ABC transporter permease 423560..424378 Rhizobium leguminosarum bv. trifolii WSM1325 8011612 YP_002974261.1 CDS Rleg_0411 NC_012850.1 424468 426360 R PFAM: AsmA family protein; KEGG: ret:RHE_CH00718 hypothetical protein; AsmA family protein complement(424468..426360) Rhizobium leguminosarum bv. trifolii WSM1325 8011613 YP_002974262.1 CDS Rleg_0412 NC_012850.1 426636 428588 D AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 426636..428588 Rhizobium leguminosarum bv. trifolii WSM1325 8011614 YP_002974263.1 CDS Rleg_0413 NC_012850.1 428804 432634 R KEGG: rec:RHECIAT_CH0000804 probable two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(428804..432634) Rhizobium leguminosarum bv. trifolii WSM1325 8011615 YP_002974264.1 CDS Rleg_0414 NC_012850.1 432848 433297 D TIGRFAM: phasin; KEGG: ret:RHE_CH00721 hypothetical protein; phasin 432848..433297 Rhizobium leguminosarum bv. trifolii WSM1325 8011616 YP_002974265.1 CDS Rleg_0415 NC_012850.1 433597 434040 D KEGG: ret:RHE_CH00727 hypothetical protein; hypothetical protein 433597..434040 Rhizobium leguminosarum bv. trifolii WSM1325 8011617 YP_002974266.1 CDS Rleg_0416 NC_012850.1 434097 434264 D KEGG: ret:RHE_CH00728 hypothetical protein; hypothetical protein 434097..434264 Rhizobium leguminosarum bv. trifolii WSM1325 8011618 YP_002974267.1 CDS Rleg_0417 NC_012850.1 434261 435142 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH00729 LysR family transcriptional regulator; LysR family transcriptional regulator complement(434261..435142) Rhizobium leguminosarum bv. trifolii WSM1325 8011619 YP_002974268.1 CDS Rleg_0418 NC_012850.1 435139 435453 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rec:RHECIAT_CH0000812 antibiotic biosynthesis monooxygenase protein; antibiotic biosynthesis monooxygenase complement(435139..435453) Rhizobium leguminosarum bv. trifolii WSM1325 8011620 YP_002974269.1 CDS Rleg_0419 NC_012850.1 435646 437142 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase; KEGG: rec:RHECIAT_CH0000813 methylmalonate-semialdehyde dehydrogenase (acylating) protein; methylmalonate-semialdehyde dehydrogenase 435646..437142 Rhizobium leguminosarum bv. trifolii WSM1325 8011621 YP_002974270.1 CDS rirA NC_012850.1 437487 437969 D rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons; iron-responsive transcriptional regulator 437487..437969 Rhizobium leguminosarum bv. trifolii WSM1325 8011623 YP_002974271.1 CDS Rleg_0422 NC_012850.1 438308 439903 D PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_CH0000815 dipeptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein 438308..439903 Rhizobium leguminosarum bv. trifolii WSM1325 8011624 YP_002974272.1 CDS Rleg_0423 NC_012850.1 439990 440994 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000816 dipeptide ABC transporter, permease protein; ABC transporter permease 439990..440994 Rhizobium leguminosarum bv. trifolii WSM1325 8011625 YP_002974273.1 CDS Rleg_0424 NC_012850.1 441004 441894 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000817 dipeptide ABC transporter, permease protein; ABC transporter permease 441004..441894 Rhizobium leguminosarum bv. trifolii WSM1325 8011626 YP_002974274.1 CDS Rleg_0425 NC_012850.1 441894 442910 D KEGG: ret:RHE_CH00739 dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 441894..442910 Rhizobium leguminosarum bv. trifolii WSM1325 8011627 YP_002974275.1 CDS dppF NC_012850.1 442907 443860 D Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 442907..443860 Rhizobium leguminosarum bv. trifolii WSM1325 8011628 YP_002974276.1 CDS Rleg_0427 NC_012850.1 443982 444518 D KEGG: rec:RHECIAT_CH0000820 gluconokinase protein; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 443982..444518 Rhizobium leguminosarum bv. trifolii WSM1325 8011629 YP_002974277.1 CDS Rleg_0428 NC_012850.1 444508 445755 R PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_CH0000821 D-amino acid dehydrogenase protein; SNP /replace=C; FAD dependent oxidoreductase complement(444508..445755) Rhizobium leguminosarum bv. trifolii WSM1325 8011630 YP_002974278.1 CDS Rleg_0429 NC_012850.1 445832 446335 R PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: ret:RHE_CH00743 hypothetical protein; isoprenylcysteine carboxyl methyltransferase complement(445832..446335) Rhizobium leguminosarum bv. trifolii WSM1325 8011631 YP_002974279.1 CDS Rleg_0430 NC_012850.1 446332 447384 R PFAM: chalcone and stilbene synthase domain protein; FAE1/Type III polyketide synthase-like protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: rec:RHECIAT_CH0000823 probable chalcone synthase protein; chalcone and stilbene synthase domain-containing protein complement(446332..447384) Rhizobium leguminosarum bv. trifolii WSM1325 8011632 YP_002974280.1 CDS Rleg_0431 NC_012850.1 447553 448089 D SMART: tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0000824 hypothetical protein; hypothetical protein 447553..448089 Rhizobium leguminosarum bv. trifolii WSM1325 8011633 YP_002974281.1 CDS Rleg_0432 NC_012850.1 448138 448743 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rec:RHECIAT_CH0000825 RNA polymerase sigma factor protein (sigma-24); ECF subfamily RNA polymerase sigma-24 subunit 448138..448743 Rhizobium leguminosarum bv. trifolii WSM1325 8011634 YP_002974282.1 CDS Rleg_0433 NC_012850.1 448740 449543 D KEGG: rec:RHECIAT_CH0000826 hypothetical protein; transmembrane anti-sigma factor 448740..449543 Rhizobium leguminosarum bv. trifolii WSM1325 8015441 YP_002974283.1 CDS Rleg_0434 NC_012850.1 449572 450435 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: atc:AGR_L_532 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(449572..450435) Rhizobium leguminosarum bv. trifolii WSM1325 8011635 YP_002974284.1 CDS Rleg_0435 NC_012850.1 450432 451325 R KEGG: atc:AGR_L_531 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase complement(450432..451325) Rhizobium leguminosarum bv. trifolii WSM1325 8011636 YP_002974285.1 CDS Rleg_0437 NC_012850.1 452396 452962 R KEGG: atc:AGR_L_529 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(452396..452962) Rhizobium leguminosarum bv. trifolii WSM1325 8011637 YP_002974286.1 CDS Rleg_0438 NC_012850.1 453209 454129 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH00763 GDP-L-fucose synthase protein; NAD-dependent epimerase/dehydratase complement(453209..454129) Rhizobium leguminosarum bv. trifolii WSM1325 8011638 YP_002974287.1 CDS Rleg_0439 NC_012850.1 454134 455216 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH00762 GDP-mannose 4,6-dehydratase protein; GDP-mannose 4,6-dehydratase complement(454134..455216) Rhizobium leguminosarum bv. trifolii WSM1325 8011639 YP_002974288.1 CDS Rleg_0440 NC_012850.1 455861 456889 D PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: rpe:RPE_4236 N-acetylneuraminate synthase; N-acylneuraminate-9-phosphate synthase 455861..456889 Rhizobium leguminosarum bv. trifolii WSM1325 8011640 YP_002974289.1 CDS Rleg_0441 NC_012850.1 457037 457849 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rce:RC1_3770 oxidoreductase, short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 457037..457849 Rhizobium leguminosarum bv. trifolii WSM1325 8011641 YP_002974290.1 CDS Rleg_0442 NC_012850.1 457852 459312 D PFAM: aldehyde Dehydrogenase; KEGG: rce:RC1_3767 aldehyde dehydrogenase, putative; aldehyde Dehydrogenase 457852..459312 Rhizobium leguminosarum bv. trifolii WSM1325 8011642 YP_002974291.1 CDS Rleg_0443 NC_012850.1 459315 460085 D PFAM: acylneuraminate cytidylyltransferase; KEGG: rce:RC1_3768 acylneuraminate cytidylyltransferase, putative; acylneuraminate cytidylyltransferase 459315..460085 Rhizobium leguminosarum bv. trifolii WSM1325 8011643 YP_002974292.1 CDS Rleg_0444 NC_012850.1 460089 461999 D PFAM: transketolase central region; transketolase domain protein; KEGG: rce:RC1_3769 transketolase, putative; transketolase 460089..461999 Rhizobium leguminosarum bv. trifolii WSM1325 8011644 YP_002974293.1 CDS Rleg_0445 NC_012850.1 462121 463842 D PFAM: Capsule polysaccharide biosynthesis protein; KEGG: rpe:RPE_4251 hypothetical protein; capsule polysaccharide biosynthesis protein 462121..463842 Rhizobium leguminosarum bv. trifolii WSM1325 8011645 YP_002974294.1 CDS Rleg_0446 NC_012850.1 463839 464504 D KEGG: rsq:Rsph17025_4339 hypothetical protein; acetyltransferase (isoleucine patch superfamily)-like protein 463839..464504 Rhizobium leguminosarum bv. trifolii WSM1325 8011646 YP_002974295.1 CDS Rleg_0447 NC_012850.1 464519 465313 D KEGG: dde:Dde_0428 glycosyltransferase-like protein; glycosyltransferase-like protein 464519..465313 Rhizobium leguminosarum bv. trifolii WSM1325 8011647 YP_002974296.1 CDS Rleg_0448 NC_012850.1 465307 466230 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: dvm:DvMF_1854 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 465307..466230 Rhizobium leguminosarum bv. trifolii WSM1325 8011648 YP_002974297.1 CDS Rleg_0449 NC_012850.1 466227 467411 D PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH00756 alpha-glycosyltransferase protein; group 1 glycosyl transferase 466227..467411 Rhizobium leguminosarum bv. trifolii WSM1325 8011649 YP_002974298.1 CDS Rleg_0450 NC_012850.1 467449 468279 D PFAM: ABC transporter; KEGG: sfu:Sfum_3355 ABC transporter; ABC transporter 467449..468279 Rhizobium leguminosarum bv. trifolii WSM1325 8011650 YP_002974299.1 CDS Rleg_0451 NC_012850.1 468284 469552 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rpe:RPE_4248 ABC transporter; ABC transporter 468284..469552 Rhizobium leguminosarum bv. trifolii WSM1325 8011651 YP_002974300.1 CDS Rleg_0452 NC_012850.1 469568 470608 D PFAM: O-methyltransferase family 3; KEGG: rpe:RPE_4247 glycosyl transferase, family 2; O-methyltransferase family protein 469568..470608 Rhizobium leguminosarum bv. trifolii WSM1325 8011652 YP_002974301.1 CDS Rleg_0453 NC_012850.1 470623 471375 D TIGRFAM: methyltransferase FkbM family; KEGG: rpe:RPE_3384 methyltransferase FkbM family; FkbM family methyltransferase 470623..471375 Rhizobium leguminosarum bv. trifolii WSM1325 8011653 YP_002974302.1 CDS Rleg_0454 NC_012850.1 471455 472354 D PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2; family 2 glycosyl transferase 471455..472354 Rhizobium leguminosarum bv. trifolii WSM1325 8011654 YP_002974303.1 CDS Rleg_0455 NC_012850.1 472699 474471 D PFAM: Capsule polysaccharide biosynthesis protein; KEGG: rpe:RPE_4251 hypothetical protein; capsular polysaccharide biosynthesis protein 472699..474471 Rhizobium leguminosarum bv. trifolii WSM1325 8011655 YP_002974304.1 CDS Rleg_0456 NC_012850.1 474468 475568 D PFAM: glycosyl transferase group 1; KEGG: bov:BOV_0533 mannosyltransferase; group 1 glycosyl transferase 474468..475568 Rhizobium leguminosarum bv. trifolii WSM1325 8011656 YP_002974305.1 CDS Rleg_0457 NC_012850.1 475565 476308 D KEGG: neu:NE0499 glycosyl transferase family protein; glycosyl transferase family protein 475565..476308 Rhizobium leguminosarum bv. trifolii WSM1325 8011657 YP_002974306.1 CDS Rleg_0458 NC_012850.1 476561 477409 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH00830 hydrolase, haloacid dehalogenase-like family protein; HAD-superfamily hydrolase 476561..477409 Rhizobium leguminosarum bv. trifolii WSM1325 8011658 YP_002974307.1 CDS Rleg_0459 NC_012850.1 477441 477599 D KEGG: ret:RHE_CH00831 bifunctional riboflavin kinase/FMN adenylyltransferase; hypothetical protein 477441..477599 Rhizobium leguminosarum bv. trifolii WSM1325 8015443 YP_002974308.1 CDS Rleg_0462 NC_012850.1 478291 478515 D KEGG: smd:Smed_6262 hypothetical protein; hypothetical protein 478291..478515 Rhizobium leguminosarum bv. trifolii WSM1325 8011661 YP_002974309.1 CDS Rleg_0463 NC_012850.1 478512 479879 D KEGG: smd:Smed_6261 NoeA host specific nodulation protein; NoeA host specific nodulation protein 478512..479879 Rhizobium leguminosarum bv. trifolii WSM1325 8011662 YP_002974310.1 CDS Rleg_0464 NC_012850.1 479876 481909 D PFAM: sulfatase; sulfatase 479876..481909 Rhizobium leguminosarum bv. trifolii WSM1325 8015444 YP_002974311.1 CDS Rleg_0466 NC_012850.1 482935 483201 R PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(482935..483201) Rhizobium leguminosarum bv. trifolii WSM1325 8011663 YP_002974312.1 CDS Rleg_0467 NC_012850.1 483756 488366 D TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: rec:RHECIAT_PC0000882 conjugal transfer protein A; Ti-type conjugative transfer relaxase TraA 483756..488366 Rhizobium leguminosarum bv. trifolii WSM1325 8011664 YP_002974313.1 CDS Rleg_0468 NC_012850.1 488419 489333 R PFAM: DNA polymerase III subunit beta; SMART: HEPN domain protein; KEGG: sme:SMa0967 hypothetical protein; DNA polymerase III subunit beta complement(488419..489333) Rhizobium leguminosarum bv. trifolii WSM1325 8011665 YP_002974314.1 CDS Rleg_0469 NC_012850.1 489934 490095 R hypothetical protein complement(489934..490095) Rhizobium leguminosarum bv. trifolii WSM1325 8011666 YP_002974315.1 CDS Rleg_0470 NC_012850.1 490166 490300 R hypothetical protein complement(490166..490300) Rhizobium leguminosarum bv. trifolii WSM1325 8011667 YP_002974316.1 CDS Rleg_0471 NC_012850.1 491357 491530 D hypothetical protein 491357..491530 Rhizobium leguminosarum bv. trifolii WSM1325 8011668 YP_002974317.1 CDS Rleg_0472 NC_012850.1 491527 492828 D PFAM: Ppx/GppA phosphatase; KEGG: ret:RHE_CH00788 exopolyphosphatase protein; Ppx/GppA phosphatase 491527..492828 Rhizobium leguminosarum bv. trifolii WSM1325 8011669 YP_002974318.1 CDS Rleg_0473 NC_012850.1 492843 493562 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: rec:RHECIAT_CH0000875 ribosomal RNA methyltransferase/cell division protein; ribosomal RNA methyltransferase RrmJ/FtsJ 492843..493562 Rhizobium leguminosarum bv. trifolii WSM1325 8011670 YP_002974319.1 CDS Rleg_0474 NC_012850.1 493720 494103 D KEGG: ret:RHE_CH00791 lactoylglutathione lyase protein; lactoylglutathione lyase protein 493720..494103 Rhizobium leguminosarum bv. trifolii WSM1325 8011671 YP_002974320.1 CDS Rleg_0475 NC_012850.1 494189 495613 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH00792 efflux transporter, permease protein; major facilitator superfamily protein complement(494189..495613) Rhizobium leguminosarum bv. trifolii WSM1325 8015447 YP_002974321.1 CDS Rleg_0476 NC_012850.1 495862 496854 D PFAM: beta-lactamase; KEGG: rec:RHECIAT_CH0000878 beta-lactamase family protein; beta-lactamase 495862..496854 Rhizobium leguminosarum bv. trifolii WSM1325 8015448 YP_002974322.1 CDS Rleg_0477 NC_012850.1 497135 498619 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 497135..498619 Rhizobium leguminosarum bv. trifolii WSM1325 8011672 YP_002974323.1 CDS Rleg_0478 NC_012850.1 498622 499176 D KEGG: ret:RHE_CH00795 hypothetical protein; hypothetical protein 498622..499176 Rhizobium leguminosarum bv. trifolii WSM1325 8011673 YP_002974324.1 CDS Rleg_0479 NC_012850.1 499341 499757 D PFAM: protein of unknown function DUF1123; KEGG: rec:RHECIAT_CH0000883 hypothetical protein; hypothetical protein 499341..499757 Rhizobium leguminosarum bv. trifolii WSM1325 8011674 YP_002974325.1 CDS Rleg_0480 NC_012850.1 500049 503138 D TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: bpa:BPP0822 autotransporter; outer membrane autotransporter barrel domain-containing protein 500049..503138 Rhizobium leguminosarum bv. trifolii WSM1325 8011675 YP_002974326.1 CDS Rleg_0481 NC_012850.1 503275 503994 D PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0000884 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 503275..503994 Rhizobium leguminosarum bv. trifolii WSM1325 8011676 YP_002974327.1 CDS Rleg_0482 NC_012850.1 504001 504969 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH00800 LysR family transcriptional regulator; LysR family transcriptional regulator complement(504001..504969) Rhizobium leguminosarum bv. trifolii WSM1325 8011677 YP_002974328.1 CDS Rleg_0483 NC_012850.1 505173 505472 D PFAM: protein of unknown function DUF1127; KEGG: ret:RHE_CH00801 hypothetical protein; hypothetical protein 505173..505472 Rhizobium leguminosarum bv. trifolii WSM1325 8011678 YP_002974329.1 CDS Rleg_0484 NC_012850.1 505632 506498 R KEGG: rec:RHECIAT_CH0000887 hypothetical protein; hypothetical protein complement(505632..506498) Rhizobium leguminosarum bv. trifolii WSM1325 8011679 YP_002974330.1 CDS Rleg_0485 NC_012850.1 506844 508217 R KEGG: ret:RHE_CH00803 glutamate-cysteine ligase protein; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; glutamate/cysteine ligase complement(506844..508217) Rhizobium leguminosarum bv. trifolii WSM1325 8011680 YP_002974331.1 CDS Rleg_0486 NC_012850.1 508365 509102 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(508365..509102) Rhizobium leguminosarum bv. trifolii WSM1325 8011681 YP_002974332.1 CDS Rleg_0487 NC_012850.1 509201 510700 R PFAM: phosphate transporter; KEGG: ret:RHE_CH00805 phosphate ABC transporter permease; phosphate transporter complement(509201..510700) Rhizobium leguminosarum bv. trifolii WSM1325 8011682 YP_002974333.1 CDS Rleg_0488 NC_012850.1 510763 511293 R PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0000891 NTP pyrophosphohydrolase protein, MuT/NUDIX family; NUDIX hydrolase complement(510763..511293) Rhizobium leguminosarum bv. trifolii WSM1325 8011683 YP_002974334.1 CDS Rleg_0489 NC_012850.1 511527 512435 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator 511527..512435 Rhizobium leguminosarum bv. trifolii WSM1325 8011684 YP_002974335.1 CDS Rleg_0490 NC_012850.1 512535 513692 D PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; KEGG: ahcY; adenosylhomocysteinase protein ; K01251 adenosylhomocysteinase; adenosylhomocysteinase 512535..513692 Rhizobium leguminosarum bv. trifolii WSM1325 8011685 YP_002974336.1 CDS Rleg_0491 NC_012850.1 513711 514706 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: met:M446_1258 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(513711..514706) Rhizobium leguminosarum bv. trifolii WSM1325 8011686 YP_002974337.1 CDS Rleg_0492 NC_012850.1 514845 515696 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mms:mma_1919 LysR family transcriptional regulator; LysR family transcriptional regulator 514845..515696 Rhizobium leguminosarum bv. trifolii WSM1325 8011687 YP_002974338.1 CDS Rleg_0493 NC_012850.1 515710 516606 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH00807 LysR family transcriptional regulator; LysR family transcriptional regulator complement(515710..516606) Rhizobium leguminosarum bv. trifolii WSM1325 8011688 YP_002974339.1 CDS Rleg_0494 NC_012850.1 516766 518205 D PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00808 glycolate oxidase subunit D protein; D-lactate dehydrogenase 516766..518205 Rhizobium leguminosarum bv. trifolii WSM1325 8011689 YP_002974340.1 CDS Rleg_0495 NC_012850.1 518202 519401 D PFAM: FAD linked oxidase domain protein; KEGG: rec:RHECIAT_CH0000894 glycolate oxidase protein, subunit E; FAD linked oxidase domain-containing protein 518202..519401 Rhizobium leguminosarum bv. trifolii WSM1325 8011690 YP_002974341.1 CDS Rleg_0497 NC_012850.1 519653 520963 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ret:RHE_CH00810 glycolate oxidase subunit F protein; hypothetical protein 519653..520963 Rhizobium leguminosarum bv. trifolii WSM1325 8011692 YP_002974342.1 CDS Rleg_0498 NC_012850.1 521006 521446 D KEGG: rec:RHECIAT_CH0000896 hypothetical protein; hypothetical protein 521006..521446 Rhizobium leguminosarum bv. trifolii WSM1325 8011693 YP_002974343.1 CDS Rleg_0499 NC_012850.1 521474 522148 R KEGG: rec:RHECIAT_CH0000897 lipid A oxidase (involved in formation of 2-aminogluconate) protein; lipid A oxidase complement(521474..522148) Rhizobium leguminosarum bv. trifolii WSM1325 8011694 YP_002974344.1 CDS Rleg_0500 NC_012850.1 522269 522961 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_CH00813 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(522269..522961) Rhizobium leguminosarum bv. trifolii WSM1325 8011695 YP_002974345.1 CDS Rleg_0501 NC_012850.1 523202 523951 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_CH00814 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(523202..523951) Rhizobium leguminosarum bv. trifolii WSM1325 8011696 YP_002974346.1 CDS Rleg_0502 NC_012850.1 524200 524829 D PFAM: methyladenine glycosylase; KEGG: rec:RHECIAT_CH0000900 DNA-3-methyladenine glycosylase I protein; DNA-3-methyladenine glycosylase I 524200..524829 Rhizobium leguminosarum bv. trifolii WSM1325 8011697 YP_002974347.1 CDS Rleg_0503 NC_012850.1 524826 525332 D KEGG: rec:RHECIAT_CH0000901 hypothetical protein; hypothetical protein 524826..525332 Rhizobium leguminosarum bv. trifolii WSM1325 8011698 YP_002974348.1 CDS Rleg_0504 NC_012850.1 525352 526056 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0000902 hydrolase protein, HAD superfamily; haloacid dehalogenase domain-containing protein hydrolase complement(525352..526056) Rhizobium leguminosarum bv. trifolii WSM1325 8011699 YP_002974349.1 CDS Rleg_0505 NC_012850.1 526294 527343 D PFAM: aldo/keto reductase; KEGG: ret:RHE_CH00818 oxidoreductase protein; aldo/keto reductase 526294..527343 Rhizobium leguminosarum bv. trifolii WSM1325 8011700 YP_002974350.1 CDS Rleg_0506 NC_012850.1 527408 527767 R PFAM: protein of unknown function DUF305; KEGG: rec:RHECIAT_CH0000904 hypothetical protein; hypothetical protein complement(527408..527767) Rhizobium leguminosarum bv. trifolii WSM1325 8011701 YP_002974351.1 CDS Rleg_0507 NC_012850.1 527843 528208 R KEGG: rec:RHECIAT_CH0000905 hypothetical protein; hypothetical protein complement(527843..528208) Rhizobium leguminosarum bv. trifolii WSM1325 8011702 YP_002974352.1 CDS Rleg_0508 NC_012850.1 528266 529021 R KEGG: rec:RHECIAT_CH0000906 hypothetical protein; hypothetical protein complement(528266..529021) Rhizobium leguminosarum bv. trifolii WSM1325 8011703 YP_002974353.1 CDS hisS NC_012850.1 529158 530678 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 529158..530678 Rhizobium leguminosarum bv. trifolii WSM1325 8011704 YP_002974354.1 CDS hisZ NC_012850.1 530721 531842 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 530721..531842 Rhizobium leguminosarum bv. trifolii WSM1325 8011705 YP_002974355.1 CDS hisG NC_012850.1 531839 532534 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 531839..532534 Rhizobium leguminosarum bv. trifolii WSM1325 8011706 YP_002974356.1 CDS Rleg_0512 NC_012850.1 532614 533030 R PFAM: DoxX family protein; KEGG: ret:RHE_CH00824 hypothetical protein; DoxX family protein complement(532614..533030) Rhizobium leguminosarum bv. trifolii WSM1325 8011707 YP_002974357.1 CDS Rleg_0513 NC_012850.1 533345 534055 D PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH00825 glutathione S-transferase protein; glutathione S-transferase domain protein 533345..534055 Rhizobium leguminosarum bv. trifolii WSM1325 8011708 YP_002974358.1 CDS Rleg_0514 NC_012850.1 534119 534565 R KEGG: rec:RHECIAT_CH0000912 hypothetical protein; hypothetical protein complement(534119..534565) Rhizobium leguminosarum bv. trifolii WSM1325 8011709 YP_002974359.1 CDS groEL NC_012850.1 535298 536941 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(535298..536941) Rhizobium leguminosarum bv. trifolii WSM1325 8011710 YP_002974360.1 CDS groES NC_012850.1 537014 537310 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(537014..537310) Rhizobium leguminosarum bv. trifolii WSM1325 8015449 YP_002974361.1 CDS Rleg_0517 NC_012850.1 537705 538553 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH00830 hydrolase, haloacid dehalogenase-like family protein; HAD-superfamily hydrolase 537705..538553 Rhizobium leguminosarum bv. trifolii WSM1325 8015450 YP_002974362.1 CDS Rleg_0518 NC_012850.1 538585 539568 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 538585..539568 Rhizobium leguminosarum bv. trifolii WSM1325 8011711 YP_002974363.1 CDS ileS NC_012850.1 539856 542747 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 539856..542747 Rhizobium leguminosarum bv. trifolii WSM1325 8011712 YP_002974364.1 CDS Rleg_0520 NC_012850.1 542881 543510 D KEGG: rec:RHECIAT_CH0000921 hypothetical protein; hypothetical protein 542881..543510 Rhizobium leguminosarum bv. trifolii WSM1325 8011713 YP_002974365.1 CDS Rleg_0521 NC_012850.1 543564 544001 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rec:RHECIAT_CH0000922 cytosine deaminase protein; zinc-binding CMP/dCMP deaminase complement(543564..544001) Rhizobium leguminosarum bv. trifolii WSM1325 8011714 YP_002974366.1 CDS Rleg_0522 NC_012850.1 544092 546188 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: rec:RHECIAT_CH0000923 probable RNA-pseudouridine synthase protein, ribosomal large subunit B; RNA-binding S4 domain-containing protein 544092..546188 Rhizobium leguminosarum bv. trifolii WSM1325 8015451 YP_002974367.1 CDS Rleg_0523 NC_012850.1 546169 546729 D TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase putative; KEGG: rec:RHECIAT_CH0000924 methylase protein; methyltransferase 546169..546729 Rhizobium leguminosarum bv. trifolii WSM1325 8011715 YP_002974368.1 CDS Rleg_0524 NC_012850.1 546742 547623 D PFAM: Patatin; KEGG: rec:RHECIAT_CH0000925 hydrolase protein; patatin 546742..547623 Rhizobium leguminosarum bv. trifolii WSM1325 8011716 YP_002974369.1 CDS Rleg_0525 NC_012850.1 547636 548088 R KEGG: hypothetical protein; hypothetical protein complement(547636..548088) Rhizobium leguminosarum bv. trifolii WSM1325 8011717 YP_002974370.1 CDS Rleg_0526 NC_012850.1 548102 549475 R PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: cysJ; sulfite reductase; propeptide PepSY amd peptidase M4 complement(548102..549475) Rhizobium leguminosarum bv. trifolii WSM1325 8011718 YP_002974371.1 CDS Rleg_0527 NC_012850.1 549565 549972 R KEGG: hypothetical protein; hypothetical protein complement(549565..549972) Rhizobium leguminosarum bv. trifolii WSM1325 8011719 YP_002974372.1 CDS Rleg_0528 NC_012850.1 550064 551878 R TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: rec:RHECIAT_CH0000928 glutathione-regulated potassium-efflux transporter protein; potassium efflux system protein complement(550064..551878) Rhizobium leguminosarum bv. trifolii WSM1325 8011720 YP_002974373.1 CDS Rleg_0529 NC_012850.1 551998 553344 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: rec:RHECIAT_CH0000929 modulator of DNA gyrase protein; peptidase U62 modulator of DNA gyrase 551998..553344 Rhizobium leguminosarum bv. trifolii WSM1325 8011721 YP_002974374.1 CDS Rleg_0530 NC_012850.1 553527 554336 D PFAM: inositol monophosphatase; KEGG: ret:RHE_CH00842 inositol monophosphatase protein; inositol monophosphatase 553527..554336 Rhizobium leguminosarum bv. trifolii WSM1325 8011722 YP_002974375.1 CDS Rleg_0531 NC_012850.1 554398 554643 D KEGG: ret:RHE_CH00843 hypothetical protein; hypothetical protein 554398..554643 Rhizobium leguminosarum bv. trifolii WSM1325 8011723 YP_002974376.1 CDS Rleg_0532 NC_012850.1 554817 556136 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 554817..556136 Rhizobium leguminosarum bv. trifolii WSM1325 8011724 YP_002974377.1 CDS Rleg_0533 NC_012850.1 556146 556868 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH00845 phosphoglycolate phosphatase protein; HAD-superfamily hydrolase 556146..556868 Rhizobium leguminosarum bv. trifolii WSM1325 8011725 YP_002974378.1 CDS lpxK NC_012850.1 557052 558095 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 557052..558095 Rhizobium leguminosarum bv. trifolii WSM1325 8011726 YP_002974379.1 CDS Rleg_0535 NC_012850.1 558179 559084 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sil:SPO2668 LysR family transcriptional regulator; LysR family transcriptional regulator complement(558179..559084) Rhizobium leguminosarum bv. trifolii WSM1325 8011727 YP_002974380.1 CDS Rleg_0536 NC_012850.1 559252 560106 D PFAM: aminotransferase class IV; KEGG: dsh:Dshi_3150 aminotransferase class IV; class IV aminotransferase 559252..560106 Rhizobium leguminosarum bv. trifolii WSM1325 8011728 YP_002974381.1 CDS Rleg_0538 NC_012850.1 560318 560548 R KEGG: rec:RHECIAT_CH0000936 hypothetical protein; hypothetical protein complement(560318..560548) Rhizobium leguminosarum bv. trifolii WSM1325 8011729 YP_002974382.1 CDS mutL NC_012850.1 560667 562469 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(560667..562469) Rhizobium leguminosarum bv. trifolii WSM1325 8011730 YP_002974383.1 CDS Rleg_0540 NC_012850.1 562653 564374 D KEGG: rec:RHECIAT_CH0000938 probable two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; SMART: response regulator receiver; PAS domain containing protein; PAS/PAC sensor protein 562653..564374 Rhizobium leguminosarum bv. trifolii WSM1325 8011731 YP_002974384.1 CDS Rleg_0541 NC_012850.1 564528 565892 D KEGG: ret:RHE_CH00850 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 564528..565892 Rhizobium leguminosarum bv. trifolii WSM1325 8011732 YP_002974385.1 CDS Rleg_0542 NC_012850.1 565964 566569 R PFAM: PRC-barrel domain protein; KEGG: rec:RHECIAT_CH0000940 hypothetical protein; PRC-barrel domain-containing protein complement(565964..566569) Rhizobium leguminosarum bv. trifolii WSM1325 8011733 YP_002974386.1 CDS Rleg_0543 NC_012850.1 566803 567690 R PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: rec:RHECIAT_CH0000941 probable gluconolactonase protein; SMP-30/gluconolaconase/LRE domain protein complement(566803..567690) Rhizobium leguminosarum bv. trifolii WSM1325 8011734 YP_002974387.1 CDS Rleg_0544 NC_012850.1 567687 568328 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(567687..568328) Rhizobium leguminosarum bv. trifolii WSM1325 8011735 YP_002974388.1 CDS Rleg_0545 NC_012850.1 568342 569259 R PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: ret:RHE_CH00854 2-dehydro-3-deoxygalactonokinase protein; 2-dehydro-3-deoxygalactonokinase complement(568342..569259) Rhizobium leguminosarum bv. trifolii WSM1325 8011736 YP_002974389.1 CDS Rleg_0546 NC_012850.1 569259 570032 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH00855 3-oxoacyl-(acyl carrier protein) reductase protein; short-chain dehydrogenase/reductase SDR complement(569259..570032) Rhizobium leguminosarum bv. trifolii WSM1325 8011737 YP_002974390.1 CDS Rleg_0547 NC_012850.1 570135 570932 D PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: ret:RHE_CH00856 IclR family transcriptional regulator; IclR family transcriptional regulator 570135..570932 Rhizobium leguminosarum bv. trifolii WSM1325 8011738 YP_002974391.1 CDS Rleg_0548 NC_012850.1 571190 571924 D PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: rec:RHECIAT_CH0000947 transcriptional regulator protein, LuxR family; LuxR family transcriptional regulator 571190..571924 Rhizobium leguminosarum bv. trifolii WSM1325 8011739 YP_002974392.1 CDS Rleg_0549 NC_012850.1 572458 573624 D PFAM: protein of unknown function DUF59; KEGG: ret:RHE_CH00859 ATP-binding protein (Mrp protein-like); hypothetical protein 572458..573624 Rhizobium leguminosarum bv. trifolii WSM1325 8011740 YP_002974393.1 CDS Rleg_0550 NC_012850.1 574069 575046 D PFAM: Mg2 transporter protein CorA family protein; KEGG: ret:RHE_CH00860 magnesium/cobalt transporter protein; Mg2 transporter protein CorA family protein 574069..575046 Rhizobium leguminosarum bv. trifolii WSM1325 8015453 YP_002974394.1 CDS Rleg_0551 NC_012850.1 575065 576963 D PFAM: K potassium transporter; KEGG: rec:RHECIAT_CH0000951 potassium transporter protein; K potassium transporter 575065..576963 Rhizobium leguminosarum bv. trifolii WSM1325 8011741 YP_002974395.1 CDS Rleg_0552 NC_012850.1 577228 578457 D PFAM: cell wall hydrolase SleB; KEGG: rec:RHECIAT_CH0000952 cell wall hydrolase protein involved in spore germination; cell wall hydrolase SleB 577228..578457 Rhizobium leguminosarum bv. trifolii WSM1325 8011742 YP_002974396.1 CDS Rleg_0553 NC_012850.1 578729 579067 D KEGG: rec:RHECIAT_CH0000953 ATP synthase protein, subunit I; ATP synthase subunit I 578729..579067 Rhizobium leguminosarum bv. trifolii WSM1325 8011743 YP_002974397.1 CDS Rleg_0554 NC_012850.1 579130 579882 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 579130..579882 Rhizobium leguminosarum bv. trifolii WSM1325 8011744 YP_002974398.1 CDS Rleg_0555 NC_012850.1 579950 580177 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 579950..580177 Rhizobium leguminosarum bv. trifolii WSM1325 8011745 YP_002974399.1 CDS Rleg_0556 NC_012850.1 580255 580878 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 580255..580878 Rhizobium leguminosarum bv. trifolii WSM1325 8011746 YP_002974400.1 CDS Rleg_0557 NC_012850.1 580882 581373 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 580882..581373 Rhizobium leguminosarum bv. trifolii WSM1325 8011747 YP_002974401.1 CDS Rleg_0558 NC_012850.1 581407 581652 D hypothetical protein 581407..581652 Rhizobium leguminosarum bv. trifolii WSM1325 8011748 YP_002974402.1 CDS Rleg_0559 NC_012850.1 581854 582972 R PFAM: transposase IS4 family protein; KEGG: ecl:EcolC_3640 transposase IS4 family protein; transposase IS4 family protein complement(581854..582972) Rhizobium leguminosarum bv. trifolii WSM1325 8011749 YP_002974403.1 CDS rnhB NC_012850.1 583112 583801 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(583112..583801) Rhizobium leguminosarum bv. trifolii WSM1325 8011750 YP_002974404.1 CDS Rleg_0561 NC_012850.1 583964 585121 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ret:RHE_CH00869 hypothetical protein; radical SAM protein complement(583964..585121) Rhizobium leguminosarum bv. trifolii WSM1325 8015454 YP_002974405.1 CDS Rleg_0562 NC_012850.1 585222 585779 D KEGG: rec:RHECIAT_CH0000960 glycosyltransferase protein; glycosyltransferase 585222..585779 Rhizobium leguminosarum bv. trifolii WSM1325 8011751 YP_002974406.1 CDS Rleg_0563 NC_012850.1 585961 586296 D KEGG: ret:RHE_CH00871 hypothetical protein; hypothetical protein 585961..586296 Rhizobium leguminosarum bv. trifolii WSM1325 8011752 YP_002974407.1 CDS Rleg_0564 NC_012850.1 586330 586881 R TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: ret:RHE_CH00872 molybdenum cofactor biosynthesis protein; molybdenum cofactor biosynthesis protein B complement(586330..586881) Rhizobium leguminosarum bv. trifolii WSM1325 8015455 YP_002974408.1 CDS Rleg_0565 NC_012850.1 586881 587792 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(586881..587792) Rhizobium leguminosarum bv. trifolii WSM1325 8011753 YP_002974409.1 CDS Rleg_0566 NC_012850.1 587844 589676 R PFAM: TPR repeat-containing protein; tetratricopeptide TPR_2 repeat protein; SMART: tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0000964 hypothetical protein; hypothetical protein complement(587844..589676) Rhizobium leguminosarum bv. trifolii WSM1325 8011754 YP_002974410.1 CDS Rleg_0567 NC_012850.1 589810 590826 R PFAM: Polyprenyl synthetase; KEGG: ret:RHE_CH00875 octaprenyl-diphosphate synthase protein; farnesyltranstransferase complement(589810..590826) Rhizobium leguminosarum bv. trifolii WSM1325 8011755 YP_002974411.1 CDS Rleg_0568 NC_012850.1 590935 591162 D KEGG: rec:RHECIAT_CH0000966 hypothetical protein; hypothetical protein 590935..591162 Rhizobium leguminosarum bv. trifolii WSM1325 8011756 YP_002974412.1 CDS Rleg_0569 NC_012850.1 591169 591939 D PFAM: methyltransferase small; KEGG: rec:RHECIAT_CH0000967 methyltransferase protein; methyltransferase small 591169..591939 Rhizobium leguminosarum bv. trifolii WSM1325 8011757 YP_002974413.1 CDS Rleg_0570 NC_012850.1 591970 593310 R TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: ret:RHE_CH00878 manganese transport protein MntH; manganese transport protein MntH complement(591970..593310) Rhizobium leguminosarum bv. trifolii WSM1325 8011758 YP_002974414.1 CDS Rleg_0571 NC_012850.1 593480 594340 D PFAM: peptidase S49; KEGG: ret:RHE_CH00879 protease protein; peptidase S49 593480..594340 Rhizobium leguminosarum bv. trifolii WSM1325 8011759 YP_002974415.1 CDS Rleg_0572 NC_012850.1 594359 594550 D KEGG: rec:RHECIAT_CH0000970 hypothetical protein; hypothetical protein 594359..594550 Rhizobium leguminosarum bv. trifolii WSM1325 8011760 YP_002974416.1 CDS glyQ NC_012850.1 594938 595873 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 594938..595873 Rhizobium leguminosarum bv. trifolii WSM1325 8011761 YP_002974417.1 CDS Rleg_0574 NC_012850.1 595968 597791 D KEGG: rec:RHECIAT_CH0000973 hypothetical protein; hypothetical protein 595968..597791 Rhizobium leguminosarum bv. trifolii WSM1325 8015456 YP_002974418.1 CDS Rleg_0575 NC_012850.1 597906 598457 D PFAM: LemA family protein; KEGG: rec:RHECIAT_CH0000974 hypothetical protein; LemA family protein 597906..598457 Rhizobium leguminosarum bv. trifolii WSM1325 8011762 YP_002974419.1 CDS Rleg_0576 NC_012850.1 598618 599880 D KEGG: rec:RHECIAT_CH0000975 3-phosphoshikimate 1-carboxyvinyltransferase protein; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 598618..599880 Rhizobium leguminosarum bv. trifolii WSM1325 8011763 YP_002974420.1 CDS Rleg_0577 NC_012850.1 599919 601853 D KEGG: ret:RHE_CH00885 hypothetical protein; hypothetical protein 599919..601853 Rhizobium leguminosarum bv. trifolii WSM1325 8011764 YP_002974421.1 CDS Rleg_0578 NC_012850.1 601919 603196 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 601919..603196 Rhizobium leguminosarum bv. trifolii WSM1325 8011765 YP_002974422.1 CDS Rleg_0579 NC_012850.1 603296 603757 D KEGG: rec:RHECIAT_CH0000978 hypothetical protein; hypothetical protein 603296..603757 Rhizobium leguminosarum bv. trifolii WSM1325 8011766 YP_002974423.1 CDS Rleg_0580 NC_012850.1 604186 606006 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH00888 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 604186..606006 Rhizobium leguminosarum bv. trifolii WSM1325 8011767 YP_002974424.1 CDS Rleg_0581 NC_012850.1 606268 608091 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH00888 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 606268..608091 Rhizobium leguminosarum bv. trifolii WSM1325 8011768 YP_002974425.1 CDS Rleg_0582 NC_012850.1 608170 608658 R PFAM: protein of unknown function DUF523; KEGG: rec:RHECIAT_CH0000979 hypothetical protein; hypothetical protein complement(608170..608658) Rhizobium leguminosarum bv. trifolii WSM1325 8011769 YP_002974426.1 CDS glyS NC_012850.1 608717 610831 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(608717..610831) Rhizobium leguminosarum bv. trifolii WSM1325 8011770 YP_002974427.1 CDS Rleg_0584 NC_012850.1 611051 613360 D PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: rec:RHECIAT_CH0000981 probable transcriptional accessory protein (RNA binding S1 domain); RNA binding S1 domain-containing protein 611051..613360 Rhizobium leguminosarum bv. trifolii WSM1325 8011771 YP_002974428.1 CDS Rleg_0585 NC_012850.1 613494 614753 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase type 11; methyltransferase type 12; KEGG: ret:RHE_CH00892 cyclopropane-fatty-acyl-phospholipid synthase protein; cyclopropane-fatty-acyl-phospholipid synthase 613494..614753 Rhizobium leguminosarum bv. trifolii WSM1325 8011772 YP_002974429.1 CDS Rleg_0586 NC_012850.1 614821 615402 D PFAM: phosphoglycerate mutase; KEGG: ret:RHE_CH00893 phosphoglycerate mutase protein; phosphoglycerate mutase 614821..615402 Rhizobium leguminosarum bv. trifolii WSM1325 8015457 YP_002974430.1 CDS Rleg_0587 NC_012850.1 615531 616343 D PFAM: MltA-interacting MipA family protein; KEGG: rec:RHECIAT_CH0000984 outer membrane scaffold protein, MipA family; MltA-interacting MipA family protein 615531..616343 Rhizobium leguminosarum bv. trifolii WSM1325 8011773 YP_002974431.1 CDS ubiA NC_012850.1 616494 617462 D UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 616494..617462 Rhizobium leguminosarum bv. trifolii WSM1325 8011774 YP_002974432.1 CDS Rleg_0589 NC_012850.1 617511 618488 R PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: threonine dehydratase protein ; K01754 threonine dehydratase; pyridoxal-5'-phosphate-dependent protein beta subunit complement(617511..618488) Rhizobium leguminosarum bv. trifolii WSM1325 8015458 YP_002974433.1 CDS Rleg_0590 NC_012850.1 618578 619039 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: transcriptional regulator protein; AsnC family transcriptional regulator 618578..619039 Rhizobium leguminosarum bv. trifolii WSM1325 8011775 YP_002974434.1 CDS Rleg_0591 NC_012850.1 619209 619775 R KEGG: rec:RHECIAT_CH0000987 hypothetical protein; hypothetical protein complement(619209..619775) Rhizobium leguminosarum bv. trifolii WSM1325 8011776 YP_002974435.1 CDS Rleg_0592 NC_012850.1 620076 623411 D PFAM: protein of unknown function DUF1217; KEGG: ret:RHE_CH00897 hypothetical protein; hypothetical protein 620076..623411 Rhizobium leguminosarum bv. trifolii WSM1325 8011777 YP_002974436.1 CDS Rleg_0593 NC_012850.1 623462 624889 R PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00898 FAD-dependent oxidoreductase protein; FAD linked oxidase domain-containing protein complement(623462..624889) Rhizobium leguminosarum bv. trifolii WSM1325 8011778 YP_002974437.1 CDS Rleg_0594 NC_012850.1 625021 625995 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: rec:RHECIAT_CH0000990 probable translation factor protein; Sua5/YciO/YrdC/YwlC family protein complement(625021..625995) Rhizobium leguminosarum bv. trifolii WSM1325 8011779 YP_002974438.1 CDS Rleg_0595 NC_012850.1 626054 626662 R KEGG: rec:RHECIAT_CH0000991 hypothetical protein; hypothetical protein complement(626054..626662) Rhizobium leguminosarum bv. trifolii WSM1325 8011780 YP_002974439.1 CDS Rleg_0596 NC_012850.1 626710 626982 D KEGG: rec:RHECIAT_CH0000992 hypothetical protein; hypothetical protein 626710..626982 Rhizobium leguminosarum bv. trifolii WSM1325 8011781 YP_002974440.1 CDS Rleg_0597 NC_012850.1 627081 628325 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: ret:RHE_CH00901 dioxygenase protein; Rieske (2Fe-2S) domain-containing protein 627081..628325 Rhizobium leguminosarum bv. trifolii WSM1325 8011782 YP_002974441.1 CDS Rleg_0598 NC_012850.1 628546 629025 D PFAM: BA14K family protein; KEGG: ret:RHE_CH00902 hypothetical protein; BA14K family protein 628546..629025 Rhizobium leguminosarum bv. trifolii WSM1325 8011783 YP_002974442.1 CDS Rleg_0599 NC_012850.1 629257 630252 R PFAM: Mg2 transporter protein CorA family protein; KEGG: rec:RHECIAT_CH0000996 probable magnesium and cobalt transporter protein; Mg2 transporter protein CorA family protein complement(629257..630252) Rhizobium leguminosarum bv. trifolii WSM1325 8011784 YP_002974443.1 CDS Rleg_0600 NC_012850.1 630462 632240 D PFAM: acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 domain; KEGG: ret:RHE_CH00905 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase 630462..632240 Rhizobium leguminosarum bv. trifolii WSM1325 8015459 YP_002974444.1 CDS Rleg_0601 NC_012850.1 632250 633005 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 632250..633005 Rhizobium leguminosarum bv. trifolii WSM1325 8011785 YP_002974445.1 CDS Rleg_0602 NC_012850.1 633048 634058 R KEGG: rec:RHECIAT_CH0000999 hypothetical protein; hypothetical protein complement(633048..634058) Rhizobium leguminosarum bv. trifolii WSM1325 8011786 YP_002974446.1 CDS Rleg_0603 NC_012850.1 634061 635311 R PFAM: (Uracil-5)-methyltransferase; KEGG: rec:RHECIAT_CH0001002 23S rRNA (uracil-5-)-methyltransferase protein; (uracil-5)-methyltransferase complement(634061..635311) Rhizobium leguminosarum bv. trifolii WSM1325 8011787 YP_002974447.1 CDS Rleg_0604 NC_012850.1 635308 636054 R KEGG: rec:RHECIAT_CH0001003 hemolysin protein; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein; hemolysin A complement(635308..636054) Rhizobium leguminosarum bv. trifolii WSM1325 8011788 YP_002974448.1 CDS Rleg_0605 NC_012850.1 636187 637185 D KEGG: mlo:mll1459 hypothetical protein; hypothetical protein 636187..637185 Rhizobium leguminosarum bv. trifolii WSM1325 8011789 YP_002974449.1 CDS Rleg_0606 NC_012850.1 637405 639339 D PFAM: chemotaxis sensory transducer; CHASE3 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH00912 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 637405..639339 Rhizobium leguminosarum bv. trifolii WSM1325 8011790 YP_002974450.1 CDS Rleg_0607 NC_012850.1 639563 641479 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(639563..641479) Rhizobium leguminosarum bv. trifolii WSM1325 8011791 YP_002974451.1 CDS Rleg_0608 NC_012850.1 641724 642647 R PFAM: Pirin domain protein; KEGG: ret:RHE_CH00914 hypothetical protein; Pirin domain-containing protein complement(641724..642647) Rhizobium leguminosarum bv. trifolii WSM1325 8011792 YP_002974452.1 CDS Rleg_0609 NC_012850.1 642784 643551 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0001008 short-chain dehydrogenase protein; short-chain dehydrogenase/reductase SDR complement(642784..643551) Rhizobium leguminosarum bv. trifolii WSM1325 8011793 YP_002974453.1 CDS Rleg_0610 NC_012850.1 643638 643889 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(643638..643889) Rhizobium leguminosarum bv. trifolii WSM1325 8015460 YP_002974454.1 CDS Rleg_0611 NC_012850.1 643892 644827 R PFAM: histone deacetylase superfamily; KEGG: rec:RHECIAT_CH0001010 probable deacetylase protein; histone deacetylase superfamily protein complement(643892..644827) Rhizobium leguminosarum bv. trifolii WSM1325 8011794 YP_002974455.1 CDS Rleg_0612 NC_012850.1 645115 645516 D KEGG: rec:RHECIAT_CH0001011 thioesterase protein; thioesterase protein 645115..645516 Rhizobium leguminosarum bv. trifolii WSM1325 8011795 YP_002974456.1 CDS Rleg_0613 NC_012850.1 645733 646161 R KEGG: rec:RHECIAT_CH0001021 hypothetical protein; hypothetical protein complement(645733..646161) Rhizobium leguminosarum bv. trifolii WSM1325 8011796 YP_002974457.1 CDS Rleg_0614 NC_012850.1 646812 647462 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_CH00919 AsnC/GntR family transcriptional regulator; GntR family transcriptional regulator complement(646812..647462) Rhizobium leguminosarum bv. trifolii WSM1325 8011797 YP_002974458.1 CDS Rleg_0615 NC_012850.1 647640 649064 D PFAM: Malonyl-CoA decarboxylase; KEGG: ret:RHE_CH00920 malonyl-CoA decarboxylase protein; malonyl-CoA decarboxylase 647640..649064 Rhizobium leguminosarum bv. trifolii WSM1325 8011798 YP_002974459.1 CDS Rleg_0616 NC_012850.1 649061 650575 D catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 649061..650575 Rhizobium leguminosarum bv. trifolii WSM1325 8011799 YP_002974460.1 CDS Rleg_0617 NC_012850.1 650671 652017 D PFAM: Dicarboxylate carrier MatC domain protein; citrate transporter; KEGG: ret:RHE_CH00922 dicarboxylate-carrier protein; dicarboxylate carrier MatC domain-containing protein 650671..652017 Rhizobium leguminosarum bv. trifolii WSM1325 8011800 YP_002974461.1 CDS Rleg_0618 NC_012850.1 652293 653837 D PFAM: tRNA synthetase class I (M); KEGG: metS; methionyl-tRNA synthetase protein ; K01874 methionyl-tRNA synthetase; tRNA synthetase class I (M) 652293..653837 Rhizobium leguminosarum bv. trifolii WSM1325 8011801 YP_002974462.1 CDS Rleg_0619 NC_012850.1 654372 655511 R KEGG: psp:PSPPH_1479 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(654372..655511) Rhizobium leguminosarum bv. trifolii WSM1325 8011802 YP_002974463.1 CDS Rleg_0620 NC_012850.1 655508 656299 R PFAM: alpha/beta hydrolase fold; KEGG: mes:Meso_4078 alpha/beta hydrolase fold; alpha/beta hydrolase complement(655508..656299) Rhizobium leguminosarum bv. trifolii WSM1325 8015461 YP_002974464.1 CDS Rleg_0621 NC_012850.1 656429 656938 R KEGG: ret:RHE_PF00083 hypothetical protein; hypothetical protein complement(656429..656938) Rhizobium leguminosarum bv. trifolii WSM1325 8011803 YP_002974465.1 CDS Rleg_0622 NC_012850.1 657077 657640 R PFAM: BioY protein; KEGG: ret:RHE_CH00928 biotin transporter protein; BioY protein complement(657077..657640) Rhizobium leguminosarum bv. trifolii WSM1325 8011804 YP_002974466.1 CDS Rleg_0623 NC_012850.1 657665 658273 R PFAM: cobalt transport protein; KEGG: rec:RHECIAT_CH0001026 probable cobalt/biotin ABC transporter, permease protein; cobalt transport protein complement(657665..658273) Rhizobium leguminosarum bv. trifolii WSM1325 8015462 YP_002974467.1 CDS Rleg_0624 NC_012850.1 658273 658947 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001027 probable cobalt/biotin ABC transporter, ATP-binding protein; ABC transporter complement(658273..658947) Rhizobium leguminosarum bv. trifolii WSM1325 8011805 YP_002974468.1 CDS Rleg_0625 NC_012850.1 659294 660484 D PFAM: protein of unknown function DUF1006; KEGG: rec:RHECIAT_CH0001029 hypothetical protein; hypothetical protein 659294..660484 Rhizobium leguminosarum bv. trifolii WSM1325 8011806 YP_002974469.1 CDS Rleg_0626 NC_012850.1 660668 661771 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: rec:RHECIAT_CH0001030 GTP cyclohydrolase II protein (riboflavin biosynthesis); 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(660668..661771) Rhizobium leguminosarum bv. trifolii WSM1325 8011807 YP_002974470.1 CDS Rleg_0627 NC_012850.1 661784 662881 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(661784..662881) Rhizobium leguminosarum bv. trifolii WSM1325 8011808 YP_002974471.1 CDS Rleg_0628 NC_012850.1 663105 666284 R KEGG: GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(663105..666284) Rhizobium leguminosarum bv. trifolii WSM1325 8011809 YP_002974472.1 CDS Rleg_0629 NC_012850.1 666484 666801 D PFAM: protein of unknown function DUF1344; KEGG: rec:RHECIAT_CH0001032 hypothetical protein; hypothetical protein 666484..666801 Rhizobium leguminosarum bv. trifolii WSM1325 8011810 YP_002974473.1 CDS Rleg_0630 NC_012850.1 667100 667690 R PFAM: phosphoglycerate mutase; KEGG: ret:RHE_CH00937 phosphoglycerate mutase protein; phosphoglycerate mutase complement(667100..667690) Rhizobium leguminosarum bv. trifolii WSM1325 8011811 YP_002974474.1 CDS Rleg_0631 NC_012850.1 667714 668532 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase complement(667714..668532) Rhizobium leguminosarum bv. trifolii WSM1325 8011812 YP_002974475.1 CDS Rleg_0632 NC_012850.1 668654 669871 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: rec:RHECIAT_CH0001036 molecular chaperone protein DnaJ; heat shock protein DnaJ domain-containing protein complement(668654..669871) Rhizobium leguminosarum bv. trifolii WSM1325 8011813 YP_002974476.1 CDS Rleg_0633 NC_012850.1 670137 670595 R KEGG: ret:RHE_CH00940 hypothetical protein; hypothetical protein complement(670137..670595) Rhizobium leguminosarum bv. trifolii WSM1325 8011814 YP_002974477.1 CDS Rleg_0634 NC_012850.1 670661 671281 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 670661..671281 Rhizobium leguminosarum bv. trifolii WSM1325 8011815 YP_002974478.1 CDS Rleg_0635 NC_012850.1 671287 672324 R PFAM: polysaccharide deacetylase; KEGG: rec:RHECIAT_CH0001039 polysaccharide deacetylase protein; polysaccharide deacetylase complement(671287..672324) Rhizobium leguminosarum bv. trifolii WSM1325 8015463 YP_002974479.1 CDS Rleg_0636 NC_012850.1 672575 673858 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Sporulation domain protein; KEGG: rec:RHECIAT_CH0001040 D-alanyl-D-alanine carboxypeptidase protein; serine-type D-Ala-D-Ala carboxypeptidase 672575..673858 Rhizobium leguminosarum bv. trifolii WSM1325 8011816 YP_002974480.1 CDS Rleg_0637 NC_012850.1 673942 674259 D KEGG: rec:RHECIAT_CH0001041 hypothetical protein; hypothetical protein 673942..674259 Rhizobium leguminosarum bv. trifolii WSM1325 8011817 YP_002974481.1 CDS Rleg_0638 NC_012850.1 674413 674793 R hypothetical protein complement(674413..674793) Rhizobium leguminosarum bv. trifolii WSM1325 8015464 YP_002974482.1 CDS Rleg_0639 NC_012850.1 675086 675577 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH00949 acetyltransferase protein; N-acetyltransferase GCN5 complement(675086..675577) Rhizobium leguminosarum bv. trifolii WSM1325 8011818 YP_002974483.1 CDS Rleg_0640 NC_012850.1 675594 677009 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ret:RHE_CH00950 Zn-dependent protease protein; peptidase U62 modulator of DNA gyrase complement(675594..677009) Rhizobium leguminosarum bv. trifolii WSM1325 8011819 YP_002974484.1 CDS Rleg_0641 NC_012850.1 677413 678054 R PFAM: Invasion associated locus B family protein; KEGG: ret:RHE_CH00951 hypothetical protein; invasion associated locus B family protein complement(677413..678054) Rhizobium leguminosarum bv. trifolii WSM1325 8011820 YP_002974485.1 CDS Rleg_0642 NC_012850.1 678395 679279 D KEGG: ret:RHE_CH00952 cytochrome-c oxidase, subunit II protein; TIGRFAM: cytochrome C oxidase, subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome C oxidase, subunit II 678395..679279 Rhizobium leguminosarum bv. trifolii WSM1325 8011821 YP_002974486.1 CDS Rleg_0643 NC_012850.1 679297 681000 D KEGG: ret:RHE_CH00953 cytochrome-c oxidase, subunit I protein; TIGRFAM: cytochrome C oxidase, subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome C oxidase, subunit I 679297..681000 Rhizobium leguminosarum bv. trifolii WSM1325 8011822 YP_002974487.1 CDS Rleg_0644 NC_012850.1 681068 682018 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 681068..682018 Rhizobium leguminosarum bv. trifolii WSM1325 8011823 YP_002974488.1 CDS Rleg_0645 NC_012850.1 682018 682158 D KEGG: rec:RHECIAT_CH0001050 hypothetical protein; hypothetical protein 682018..682158 Rhizobium leguminosarum bv. trifolii WSM1325 8011824 YP_002974489.1 CDS Rleg_0646 NC_012850.1 682155 682763 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 682155..682763 Rhizobium leguminosarum bv. trifolii WSM1325 8011825 YP_002974490.1 CDS Rleg_0647 NC_012850.1 682825 683703 D PFAM: cytochrome C oxidase subunit III; KEGG: rec:RHECIAT_CH0001052 cytochrome C oxidase protein, subunit III; cytochrome-c oxidase 682825..683703 Rhizobium leguminosarum bv. trifolii WSM1325 8015465 YP_002974491.1 CDS Rleg_0648 NC_012850.1 684198 684839 R PFAM: Chloramphenicol phosphotransferase family protein; KEGG: rec:RHECIAT_CH0001053 probable chloramphenicol phosphotransferase protein; chloramphenicol phosphotransferase complement(684198..684839) Rhizobium leguminosarum bv. trifolii WSM1325 8011826 YP_002974492.1 CDS Rleg_0649 NC_012850.1 685076 685456 D PFAM: protein of unknown function DUF983; KEGG: rec:RHECIAT_CH0001054 hypothetical conserved membrane protein; hypothetical protein 685076..685456 Rhizobium leguminosarum bv. trifolii WSM1325 8011827 YP_002974493.1 CDS Rleg_0650 NC_012850.1 685449 686201 D PFAM: Surfeit locus 1 family protein; KEGG: rec:RHECIAT_CH0001055 transmembrane cytochrome oxidase complex biogenesis protein; surfeit locus 1 family protein 685449..686201 Rhizobium leguminosarum bv. trifolii WSM1325 8011828 YP_002974494.1 CDS ispH NC_012850.1 686445 687446 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 686445..687446 Rhizobium leguminosarum bv. trifolii WSM1325 8011829 YP_002974495.1 CDS Rleg_0652 NC_012850.1 687497 688480 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 687497..688480 Rhizobium leguminosarum bv. trifolii WSM1325 8011830 YP_002974496.1 CDS rnhA NC_012850.1 688477 688932 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 688477..688932 Rhizobium leguminosarum bv. trifolii WSM1325 8011831 YP_002974497.1 CDS Rleg_0654 NC_012850.1 688980 689873 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_1771 LysR family transcriptional regulator; LysR family transcriptional regulator complement(688980..689873) Rhizobium leguminosarum bv. trifolii WSM1325 8011832 YP_002974498.1 CDS Rleg_0655 NC_012850.1 690131 691327 D PFAM: carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: smd:Smed_4453 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 690131..691327 Rhizobium leguminosarum bv. trifolii WSM1325 8011833 YP_002974499.1 CDS Rleg_0656 NC_012850.1 691353 691919 D KEGG: pde:Pden_3241 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 691353..691919 Rhizobium leguminosarum bv. trifolii WSM1325 8011834 YP_002974500.1 CDS Rleg_0657 NC_012850.1 692090 693175 R KEGG: ret:RHE_CH00964 hypothetical protein; hypothetical protein complement(692090..693175) Rhizobium leguminosarum bv. trifolii WSM1325 8011835 YP_002974501.1 CDS Rleg_0658 NC_012850.1 693325 693516 R PFAM: CsbD family protein; KEGG: rec:RHECIAT_CH0001060 hypothetical protein; CsbD family protein complement(693325..693516) Rhizobium leguminosarum bv. trifolii WSM1325 8011836 YP_002974502.1 CDS Rleg_0659 NC_012850.1 693631 694236 R PFAM: protein of unknown function DUF179; KEGG: rec:RHECIAT_CH0001061 transcriptional regulator protein; hypothetical protein complement(693631..694236) Rhizobium leguminosarum bv. trifolii WSM1325 8015466 YP_002974503.1 CDS Rleg_0660 NC_012850.1 694378 695241 D KEGG: ret:RHE_CH00967 hypothetical protein; hypothetical protein 694378..695241 Rhizobium leguminosarum bv. trifolii WSM1325 8011837 YP_002974504.1 CDS Rleg_0661 NC_012850.1 695323 695808 D PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rec:RHECIAT_CH0001063 thioredoxin protein; redoxin domain-containing protein 695323..695808 Rhizobium leguminosarum bv. trifolii WSM1325 8011838 YP_002974505.1 CDS Rleg_0662 NC_012850.1 695908 696261 R KEGG: hypothetical protein; hypothetical protein complement(695908..696261) Rhizobium leguminosarum bv. trifolii WSM1325 8015467 YP_002974506.1 CDS Rleg_0663 NC_012850.1 696273 696662 R KEGG: nar:Saro_3538 hypothetical protein; hypothetical protein complement(696273..696662) Rhizobium leguminosarum bv. trifolii WSM1325 8011839 YP_002974507.1 CDS Rleg_0664 NC_012850.1 696806 697540 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A2677 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR complement(696806..697540) Rhizobium leguminosarum bv. trifolii WSM1325 8011840 YP_002974508.1 CDS Rleg_0665 NC_012850.1 697651 698238 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A2672 TetR family transcriptional regulator; TetR family transcriptional regulator complement(697651..698238) Rhizobium leguminosarum bv. trifolii WSM1325 8011841 YP_002974509.1 CDS Rleg_0666 NC_012850.1 698371 698946 R TIGRFAM: uncharacterized peroxidase-related enzyme; PFAM: carboxymuconolactone decarboxylase; KEGG: hypothetical protein; hypothetical protein complement(698371..698946) Rhizobium leguminosarum bv. trifolii WSM1325 8011842 YP_002974510.1 CDS Rleg_0667 NC_012850.1 698943 699425 R KEGG: hypothetical protein; hypothetical protein complement(698943..699425) Rhizobium leguminosarum bv. trifolii WSM1325 8011843 YP_002974511.1 CDS Rleg_0668 NC_012850.1 699587 700585 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator 699587..700585 Rhizobium leguminosarum bv. trifolii WSM1325 8011844 YP_002974512.1 CDS Rleg_0669 NC_012850.1 700582 702072 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 700582..702072 Rhizobium leguminosarum bv. trifolii WSM1325 8011845 YP_002974513.1 CDS Rleg_0670 NC_012850.1 702065 702805 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: amino acid ABC transporter; ABC transporter 702065..702805 Rhizobium leguminosarum bv. trifolii WSM1325 8011846 YP_002974514.1 CDS Rleg_0671 NC_012850.1 702822 703646 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: amino acid ABC transporter; family 3 extracellular solute-binding protein 702822..703646 Rhizobium leguminosarum bv. trifolii WSM1325 8011847 YP_002974515.1 CDS Rleg_0672 NC_012850.1 703703 704410 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amino acid ABC transporter; polar amino acid ABC transcriptional regulator inner membrane protein 703703..704410 Rhizobium leguminosarum bv. trifolii WSM1325 8015468 YP_002974516.1 CDS Rleg_0673 NC_012850.1 704430 705122 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amino acid ABC transporter; polar amino acid ABC transcriptional regulator inner membrane protein 704430..705122 Rhizobium leguminosarum bv. trifolii WSM1325 8011848 YP_002974517.1 CDS Rleg_0674 NC_012850.1 705249 705638 R SNP /replace=T; hypothetical protein complement(705249..705638) Rhizobium leguminosarum bv. trifolii WSM1325 8011849 YP_002974518.1 CDS Rleg_0675 NC_012850.1 705813 705941 D hypothetical protein 705813..705941 Rhizobium leguminosarum bv. trifolii WSM1325 8011850 YP_002974519.1 CDS Rleg_0676 NC_012850.1 705938 706687 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001066 probable zinc ABC transporter, ATP-binding protein; ABC transporter 705938..706687 Rhizobium leguminosarum bv. trifolii WSM1325 8011851 YP_002974520.1 CDS Rleg_0677 NC_012850.1 706684 707556 D PFAM: ABC transporter; KEGG: rec:RHECIAT_CH0001067 probable zinc ABC transporter, permease protein; ABC transporter 706684..707556 Rhizobium leguminosarum bv. trifolii WSM1325 8011852 YP_002974521.1 CDS Rleg_0678 NC_012850.1 707573 708472 D PFAM: periplasmic solute binding protein; KEGG: ret:RHE_CH00971 zinc ABC transporter substrate-binding protein; periplasmic solute binding protein 707573..708472 Rhizobium leguminosarum bv. trifolii WSM1325 8011853 YP_002974522.1 CDS Rleg_0679 NC_012850.1 708585 709169 R KEGG: transporter; transporter complement(708585..709169) Rhizobium leguminosarum bv. trifolii WSM1325 8011854 YP_002974523.1 CDS Rleg_0680 NC_012850.1 709247 709555 R PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: rec:RHECIAT_CH0001069 hypothetical protein; Stress responsive alpha-beta barrel domain protein complement(709247..709555) Rhizobium leguminosarum bv. trifolii WSM1325 8011855 YP_002974524.1 CDS Rleg_0681 NC_012850.1 709690 710115 R KEGG: ret:RHE_CH00975 hypothetical protein; hypothetical protein complement(709690..710115) Rhizobium leguminosarum bv. trifolii WSM1325 8011856 YP_002974525.1 CDS Rleg_0682 NC_012850.1 710257 710742 R PFAM: endoribonuclease L-PSP; KEGG: sme:SMc01714 hypothetical protein; endoribonuclease L-PSP complement(710257..710742) Rhizobium leguminosarum bv. trifolii WSM1325 8011857 YP_002974526.1 CDS Rleg_0683 NC_012850.1 710936 711637 D PFAM: regulatory protein TetR; tetracyclin repressor domain protein; KEGG: sme:SMc01715 hypothetical protein; TetR family transcriptional regulator 710936..711637 Rhizobium leguminosarum bv. trifolii WSM1325 8015469 YP_002974527.1 CDS Rleg_0684 NC_012850.1 711723 712073 R KEGG: ret:RHE_CH01058 hypothetical protein; hypothetical protein complement(711723..712073) Rhizobium leguminosarum bv. trifolii WSM1325 8011858 YP_002974528.1 CDS Rleg_0685 NC_012850.1 712485 713156 D PFAM: protein of unknown function DUF938; KEGG: reu:Reut_B5107 hypothetical protein; hypothetical protein 712485..713156 Rhizobium leguminosarum bv. trifolii WSM1325 8015470 YP_002974529.1 CDS Rleg_0686 NC_012850.1 713468 714577 D PFAM: oxidoreductase molybdopterin binding; KEGG: smd:Smed_6027 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin 713468..714577 Rhizobium leguminosarum bv. trifolii WSM1325 8011859 YP_002974530.1 CDS Rleg_0687 NC_012850.1 714862 715488 D PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: ret:RHE_CH01063 SAM-dependent methyltransferase protein; SNP /replace=T; type 12 methyltransferase 714862..715488 Rhizobium leguminosarum bv. trifolii WSM1325 8011860 YP_002974531.1 CDS Rleg_0688 NC_012850.1 715601 716110 D KEGG: sme:SMa1929 hypothetical protein; hypothetical protein 715601..716110 Rhizobium leguminosarum bv. trifolii WSM1325 8011861 YP_002974532.1 CDS Rleg_0689 NC_012850.1 716136 719033 R KEGG: ret:RHE_CH00976 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; Diverse 7TM receptor transmembrane region; GGDEF domain containing protein; Diverse 7TM receptor extracellular region 2; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(716136..719033) Rhizobium leguminosarum bv. trifolii WSM1325 8011862 YP_002974533.1 CDS Rleg_0690 NC_012850.1 719045 719659 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0001072 ribosomal-protein-alanine N-acetyltransferase protein; N-acetyltransferase GCN5 complement(719045..719659) Rhizobium leguminosarum bv. trifolii WSM1325 8011863 YP_002974534.1 CDS Rleg_0691 NC_012850.1 719689 720987 R PFAM: peptidase M16 domain protein; KEGG: rec:RHECIAT_CH0001073 probable processing peptidase protein; peptidase M16 domain-containing protein complement(719689..720987) Rhizobium leguminosarum bv. trifolii WSM1325 8011864 YP_002974535.1 CDS Rleg_0692 NC_012850.1 720991 722415 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(720991..722415) Rhizobium leguminosarum bv. trifolii WSM1325 8011865 YP_002974536.1 CDS Rleg_0693 NC_012850.1 722691 723335 D KEGG: ret:RHE_CH00980 hypothetical protein; hypothetical protein 722691..723335 Rhizobium leguminosarum bv. trifolii WSM1325 8011866 YP_002974537.1 CDS Rleg_0694 NC_012850.1 723638 724327 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0001077 probable hydrolase phosphatase protein; HAD-superfamily hydrolase complement(723638..724327) Rhizobium leguminosarum bv. trifolii WSM1325 8011867 YP_002974538.1 CDS Rleg_0695 NC_012850.1 724680 726089 R KEGG: hypothetical protein; iron-dependent peroxidase-like protein complement(724680..726089) Rhizobium leguminosarum bv. trifolii WSM1325 8011868 YP_002974539.1 CDS Rleg_0697 NC_012850.1 726506 728338 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: mcpCf; methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(726506..728338) Rhizobium leguminosarum bv. trifolii WSM1325 8011869 YP_002974540.1 CDS Rleg_0698 NC_012850.1 728601 728810 D hypothetical protein 728601..728810 Rhizobium leguminosarum bv. trifolii WSM1325 8011870 YP_002974541.1 CDS Rleg_0699 NC_012850.1 728807 729031 R hypothetical protein complement(728807..729031) Rhizobium leguminosarum bv. trifolii WSM1325 8011871 YP_002974542.1 CDS Rleg_0700 NC_012850.1 729179 729610 D hypothetical protein 729179..729610 Rhizobium leguminosarum bv. trifolii WSM1325 8015472 YP_002974543.1 CDS Rleg_0701 NC_012850.1 729656 730342 R SMART: regulatory protein ArsR; KEGG: rec:RHECIAT_CH0001081 transcriptional regulator protein; ArsR family transcriptional regulator complement(729656..730342) Rhizobium leguminosarum bv. trifolii WSM1325 8011872 YP_002974544.1 CDS Rleg_0702 NC_012850.1 730415 730744 D PFAM: NIPSNAP family containing protein; KEGG: ret:RHE_CH00993 hypothetical protein; NIPSNAP family containing protein 730415..730744 Rhizobium leguminosarum bv. trifolii WSM1325 8015473 YP_002974545.1 CDS Rleg_0703 NC_012850.1 730741 731091 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rec:RHECIAT_CH0001083 antibiotic biosynthesis monooxygenase protein; antibiotic biosynthesis monooxygenase 730741..731091 Rhizobium leguminosarum bv. trifolii WSM1325 8011873 YP_002974546.1 CDS Rleg_0704 NC_012850.1 731270 732409 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ret:RHE_CH00995 site-specific DNA-methyltransferase (adenine-specific) protein; DNA methylase N-4/N-6 domain-containing protein 731270..732409 Rhizobium leguminosarum bv. trifolii WSM1325 8011874 YP_002974547.1 CDS Rleg_0705 NC_012850.1 732509 732874 R KEGG: rec:RHECIAT_CH0001085 hypothetical protein; hypothetical protein complement(732509..732874) Rhizobium leguminosarum bv. trifolii WSM1325 8015474 YP_002974548.1 CDS Rleg_0706 NC_012850.1 732880 733494 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0001086 probable 2-haloacid dehalogenase protein; HAD-superfamily hydrolase complement(732880..733494) Rhizobium leguminosarum bv. trifolii WSM1325 8011875 YP_002974549.1 CDS Rleg_0707 NC_012850.1 733497 734600 R KEGG: ret:RHE_CH00997 A/G-specific adenine glycosylase protein; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; A/G-specific adenine glycosylase complement(733497..734600) Rhizobium leguminosarum bv. trifolii WSM1325 8011876 YP_002974550.1 CDS Rleg_0708 NC_012850.1 734709 735200 D PFAM: protein of unknown function DUF721; KEGG: rec:RHECIAT_CH0001088 hypothetical protein; hypothetical protein 734709..735200 Rhizobium leguminosarum bv. trifolii WSM1325 8011877 YP_002974551.1 CDS Rleg_0709 NC_012850.1 735275 735718 R PFAM: RbsD or FucU transport; KEGG: bxe:Bxe_C1273 sugar binding or transport, RbsD/FucU; transporter complement(735275..735718) Rhizobium leguminosarum bv. trifolii WSM1325 8011878 YP_002974552.1 CDS Rleg_0710 NC_012850.1 735956 736960 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: acr:Acry_0501 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 735956..736960 Rhizobium leguminosarum bv. trifolii WSM1325 8011879 YP_002974553.1 CDS Rleg_0711 NC_012850.1 736962 738449 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mlo:mll1016 ATP-binding protein of sugar ABC transporter; ABC transporter 736962..738449 Rhizobium leguminosarum bv. trifolii WSM1325 8011880 YP_002974554.1 CDS Rleg_0712 NC_012850.1 738463 739395 D PFAM: inner-membrane translocator; KEGG: mlo:mll1013 permease protein of sugar ABC transporter; inner-membrane translocator 738463..739395 Rhizobium leguminosarum bv. trifolii WSM1325 8011881 YP_002974555.1 CDS Rleg_0713 NC_012850.1 739422 740423 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mll1012 periplasmic ribose-binding protein; periplasmic binding protein/LacI transcriptional regulator 739422..740423 Rhizobium leguminosarum bv. trifolii WSM1325 8011882 YP_002974556.1 CDS Rleg_0714 NC_012850.1 740563 740919 R KEGG: rec:RHECIAT_CH0001090 hypothetical protein; hypothetical protein complement(740563..740919) Rhizobium leguminosarum bv. trifolii WSM1325 8011883 YP_002974557.1 CDS Rleg_0715 NC_012850.1 741196 741966 D KEGG: rec:RHECIAT_CH0001093 thiol-disulfide oxidoreductase protein; thiol-disulfide oxidoreductase protein 741196..741966 Rhizobium leguminosarum bv. trifolii WSM1325 8011884 YP_002974558.1 CDS Rleg_0716 NC_012850.1 742186 745647 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rec:RHECIAT_CH0001094 chromosome partition protein; chromosome segregation protein SMC 742186..745647 Rhizobium leguminosarum bv. trifolii WSM1325 8011885 YP_002974559.1 CDS Rleg_0717 NC_012850.1 746487 749192 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 746487..749192 Rhizobium leguminosarum bv. trifolii WSM1325 8011886 YP_002974560.1 CDS Rleg_0718 NC_012850.1 749231 749509 R KEGG: ret:RHE_CH01004 hypothetical protein; hypothetical protein complement(749231..749509) Rhizobium leguminosarum bv. trifolii WSM1325 8011887 YP_002974561.1 CDS Rleg_0719 NC_012850.1 749958 750155 R KEGG: rec:RHECIAT_CH0001103 hypothetical protein; hypothetical protein complement(749958..750155) Rhizobium leguminosarum bv. trifolii WSM1325 8011888 YP_002974562.1 CDS Rleg_0720 NC_012850.1 750279 750524 D KEGG: ret:RHE_CH01005 hypothetical protein; hypothetical protein 750279..750524 Rhizobium leguminosarum bv. trifolii WSM1325 8011889 YP_002974563.1 CDS Rleg_0721 NC_012850.1 750541 750933 R KEGG: ret:RHE_CH01006 hypothetical protein; hypothetical protein complement(750541..750933) Rhizobium leguminosarum bv. trifolii WSM1325 8011890 YP_002974564.1 CDS Rleg_0722 NC_012850.1 751231 752184 D KEGG: ret:RHE_CH01007 hypothetical protein; hypothetical protein 751231..752184 Rhizobium leguminosarum bv. trifolii WSM1325 8011891 YP_002974565.1 CDS Rleg_0723 NC_012850.1 752819 754543 R PFAM: saccharopine dehydrogenase; KEGG: ret:RHE_CH01011 hypothetical protein; saccharopine dehydrogenase complement(752819..754543) Rhizobium leguminosarum bv. trifolii WSM1325 8011892 YP_002974566.1 CDS Rleg_0724 NC_012850.1 754540 754998 R PFAM: thiol-disulphide oxidoreductase DCC; KEGG: ret:RHE_CH01012 hypothetical protein; thiol-disulfide oxidoreductase DCC complement(754540..754998) Rhizobium leguminosarum bv. trifolii WSM1325 8011893 YP_002974567.1 CDS Rleg_0725 NC_012850.1 755029 755940 R PFAM: beta-lactamase; KEGG: rec:RHECIAT_CH0001110 probable beta-lactamase family protein; beta-lactamase complement(755029..755940) Rhizobium leguminosarum bv. trifolii WSM1325 8011894 YP_002974568.1 CDS Rleg_0726 NC_012850.1 757922 758290 D PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMa2191 transposase, fragment; transposase IS3/IS911 family protein 757922..758290 Rhizobium leguminosarum bv. trifolii WSM1325 8011896 YP_002974569.1 CDS Rleg_0727 NC_012850.1 758287 758634 D PFAM: IS66 Orf2 family protein; KEGG: oan:Oant_4787 IS66 Orf2 family protein; IS66 Orf2 family protein 758287..758634 Rhizobium leguminosarum bv. trifolii WSM1325 8011897 YP_002974570.1 CDS Rleg_0728 NC_012850.1 758698 760320 D PFAM: transposase IS66; KEGG: sme:SMa2171 transposase; transposase IS66 758698..760320 Rhizobium leguminosarum bv. trifolii WSM1325 8011898 YP_002974571.1 CDS Rleg_0729 NC_012850.1 760320 760616 D KEGG: sme:SMa1608 hypothetical protein; hypothetical protein 760320..760616 Rhizobium leguminosarum bv. trifolii WSM1325 8011899 YP_002974572.1 CDS Rleg_0731 NC_012850.1 761191 761592 R KEGG: rpb:RPB_3532 hypothetical protein; hypothetical protein complement(761191..761592) Rhizobium leguminosarum bv. trifolii WSM1325 8011901 YP_002974573.1 CDS Rleg_0733 NC_012850.1 762278 763057 R PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_CH0001115 probable oxidoreducatse protein; short-chain dehydrogenase/reductase SDR complement(762278..763057) Rhizobium leguminosarum bv. trifolii WSM1325 8011903 YP_002974574.1 CDS Rleg_0734 NC_012850.1 763562 764170 R KEGG: rec:RHECIAT_CH0001118 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(763562..764170) Rhizobium leguminosarum bv. trifolii WSM1325 8011904 YP_002974575.1 CDS Rleg_0735 NC_012850.1 764282 764968 D PFAM: PspA/IM30 family protein; KEGG: ret:RHE_CH01020 negative regulator protein PspA (suppresses sigma54-dependent transcription); phage shock protein A, PspA 764282..764968 Rhizobium leguminosarum bv. trifolii WSM1325 8011905 YP_002974576.1 CDS Rleg_0736 NC_012850.1 765018 765299 D PFAM: YiaAB two helix domain protein; KEGG: rec:RHECIAT_CH0001120 hypothetical protein; YiaAB two helix domain-containing protein 765018..765299 Rhizobium leguminosarum bv. trifolii WSM1325 8011906 YP_002974577.1 CDS Rleg_0737 NC_012850.1 765392 768787 D Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; acylglycerophosphoethanolamine acyltransferase 765392..768787 Rhizobium leguminosarum bv. trifolii WSM1325 8015475 YP_002974578.1 CDS Rleg_0738 NC_012850.1 769048 769548 R KEGG: ret:RHE_CH01025 hypothetical protein; hypothetical protein complement(769048..769548) Rhizobium leguminosarum bv. trifolii WSM1325 8011907 YP_002974579.1 CDS Rleg_0739 NC_012850.1 769872 771092 R KEGG: hypothetical protein; hypothetical protein complement(769872..771092) Rhizobium leguminosarum bv. trifolii WSM1325 8015476 YP_002974580.1 CDS Rleg_0740 NC_012850.1 771450 771614 D hypothetical protein 771450..771614 Rhizobium leguminosarum bv. trifolii WSM1325 8011909 YP_002974581.1 CDS Rleg_0741 NC_012850.1 771906 772631 D KEGG: rec:RHECIAT_PC0000054 hypothetical protein; Crp/Fnr family transcriptional regulator 771906..772631 Rhizobium leguminosarum bv. trifolii WSM1325 8011910 YP_002974582.1 CDS Rleg_0742 NC_012850.1 772870 773118 D KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein 772870..773118 Rhizobium leguminosarum bv. trifolii WSM1325 8011911 YP_002974583.1 CDS Rleg_0743 NC_012850.1 773178 774764 R hypothetical protein complement(773178..774764) Rhizobium leguminosarum bv. trifolii WSM1325 8011912 YP_002974584.1 CDS Rleg_0744 NC_012850.1 774965 775984 R SMART: regulatory protein LuxR; KEGG: transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(774965..775984) Rhizobium leguminosarum bv. trifolii WSM1325 8011913 YP_002974585.1 CDS Rleg_0745 NC_012850.1 775994 776182 R hypothetical protein complement(775994..776182) Rhizobium leguminosarum bv. trifolii WSM1325 8015477 YP_002974586.1 CDS Rleg_0746 NC_012850.1 776366 776605 D KEGG: rec:RHECIAT_CH0001129 hypothetical protein; hypothetical protein 776366..776605 Rhizobium leguminosarum bv. trifolii WSM1325 8011914 YP_002974587.1 CDS Rleg_0747 NC_012850.1 776632 776856 R KEGG: ret:RHE_CH01031 hypothetical protein; hypothetical protein complement(776632..776856) Rhizobium leguminosarum bv. trifolii WSM1325 8011915 YP_002974588.1 CDS Rleg_0748 NC_012850.1 776853 777086 R hypothetical protein complement(776853..777086) Rhizobium leguminosarum bv. trifolii WSM1325 8011916 YP_002974589.1 CDS Rleg_0749 NC_012850.1 777098 777361 R KEGG: rec:RHECIAT_CH0001131 hypothetical protein; hypothetical protein complement(777098..777361) Rhizobium leguminosarum bv. trifolii WSM1325 8011917 YP_002974590.1 CDS Rleg_0750 NC_012850.1 778062 778166 R hypothetical protein complement(778062..778166) Rhizobium leguminosarum bv. trifolii WSM1325 8011918 YP_002974591.1 CDS Rleg_0751 NC_012850.1 778230 778877 R KEGG: ret:RHE_CH01033 hypothetical protein; SNP /replace=T; hypothetical protein complement(778230..778877) Rhizobium leguminosarum bv. trifolii WSM1325 8011919 YP_002974592.1 CDS Rleg_0752 NC_012850.1 779020 779211 D hypothetical protein 779020..779211 Rhizobium leguminosarum bv. trifolii WSM1325 8011920 YP_002974593.1 CDS Rleg_0753 NC_012850.1 779208 779426 D KEGG: rec:RHECIAT_CH0001134 hypothetical protein; hypothetical protein 779208..779426 Rhizobium leguminosarum bv. trifolii WSM1325 8011921 YP_002974594.1 CDS Rleg_0754 NC_012850.1 779648 779926 D KEGG: rec:RHECIAT_CH0001135 hypothetical protein; hypothetical protein 779648..779926 Rhizobium leguminosarum bv. trifolii WSM1325 8011922 YP_002974595.1 CDS Rleg_0755 NC_012850.1 779959 780324 D KEGG: ret:RHE_CH01035 hypothetical protein; hypothetical protein 779959..780324 Rhizobium leguminosarum bv. trifolii WSM1325 8011923 YP_002974596.1 CDS Rleg_0756 NC_012850.1 780332 780685 D KEGG: ret:RHE_CH01036 hypothetical protein; hypothetical protein 780332..780685 Rhizobium leguminosarum bv. trifolii WSM1325 8015478 YP_002974597.1 CDS Rleg_0757 NC_012850.1 780682 780981 D KEGG: smd:Smed_4846 hypothetical protein; hypothetical protein 780682..780981 Rhizobium leguminosarum bv. trifolii WSM1325 8011924 YP_002974598.1 CDS Rleg_0758 NC_012850.1 780978 781175 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ret:RHE_CH01037 LuxR family transcriptional regulator; LuxR family transcriptional regulator 780978..781175 Rhizobium leguminosarum bv. trifolii WSM1325 8011925 YP_002974599.1 CDS Rleg_0759 NC_012850.1 781189 781782 D KEGG: ret:RHE_CH01038 hypothetical protein; hypothetical protein 781189..781782 Rhizobium leguminosarum bv. trifolii WSM1325 8015479 YP_002974600.1 CDS Rleg_0760 NC_012850.1 782264 782590 D PFAM: NIPSNAP family containing protein; KEGG: mlo:mll2321 hypothetical protein; NIPSNAP family containing protein 782264..782590 Rhizobium leguminosarum bv. trifolii WSM1325 8015480 YP_002974601.1 CDS Rleg_0761 NC_012850.1 782998 783819 R PFAM: aminoglycoside phosphotransferase; KEGG: ret:RHE_PE00141 trifolitoxin immunity protein; aminoglycoside phosphotransferase complement(782998..783819) Rhizobium leguminosarum bv. trifolii WSM1325 8011926 YP_002974602.1 CDS Rleg_0762 NC_012850.1 784413 785987 D PFAM: carboxylesterase type B; KEGG: rpe:RPE_1072 carboxylesterase, type B; carboxylesterase 784413..785987 Rhizobium leguminosarum bv. trifolii WSM1325 8011927 YP_002974603.1 CDS Rleg_0764 NC_012850.1 786191 786424 R KEGG: smd:Smed_4456 hypothetical protein; hypothetical protein complement(786191..786424) Rhizobium leguminosarum bv. trifolii WSM1325 8011929 YP_002974604.1 CDS Rleg_0765 NC_012850.1 786977 787780 D PFAM: glycosyl transferase family 25; KEGG: ret:RHE_CH01041 glycosyltransferase protein; glycosyl transferase family protein 786977..787780 Rhizobium leguminosarum bv. trifolii WSM1325 8011930 YP_002974605.1 CDS Rleg_0766 NC_012850.1 787746 789176 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH01042 two-component sensor histidine kinase protein; histidine kinase complement(787746..789176) Rhizobium leguminosarum bv. trifolii WSM1325 8011931 YP_002974606.1 CDS Rleg_0767 NC_012850.1 789246 789935 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ret:RHE_CH01043 two-component response regulator protein; transcriptional regulator complement(789246..789935) Rhizobium leguminosarum bv. trifolii WSM1325 8011932 YP_002974607.1 CDS Rleg_0768 NC_012850.1 790563 790913 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH01071 hypothetical protein; cupin 790563..790913 Rhizobium leguminosarum bv. trifolii WSM1325 8011933 YP_002974608.1 CDS Rleg_0769 NC_012850.1 790964 791563 R KEGG: bxe:Bxe_B2414 cytochrome C; cytochrome C complement(790964..791563) Rhizobium leguminosarum bv. trifolii WSM1325 8011934 YP_002974609.1 CDS Rleg_0770 NC_012850.1 791698 792489 R PFAM: class II aldolase/adducin family protein; KEGG: adolase/adducin; hypothetical protein complement(791698..792489) Rhizobium leguminosarum bv. trifolii WSM1325 8011935 YP_002974610.1 CDS Rleg_0771 NC_012850.1 792789 793181 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rpb:RPB_2945 response regulator receiver domain-containing protein; response regulator receiver protein complement(792789..793181) Rhizobium leguminosarum bv. trifolii WSM1325 8015481 YP_002974611.1 CDS Rleg_0772 NC_012850.1 793193 794308 R PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sensory transduction regulatory protein; signal transduction histidine kinase complement(793193..794308) Rhizobium leguminosarum bv. trifolii WSM1325 8011936 YP_002974612.1 CDS Rleg_0773 NC_012850.1 794589 795167 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mno:Mnod_5546 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(794589..795167) Rhizobium leguminosarum bv. trifolii WSM1325 8011937 YP_002974613.1 CDS Rleg_0774 NC_012850.1 795177 795431 R KEGG: psb:Psyr_1616 Rieske [2Fe-2S] region; hypothetical protein complement(795177..795431) Rhizobium leguminosarum bv. trifolii WSM1325 8011938 YP_002974614.1 CDS Rleg_0775 NC_012850.1 795428 796486 R KEGG: csa:Csal_0745 cupin 2 protein; hypothetical protein complement(795428..796486) Rhizobium leguminosarum bv. trifolii WSM1325 8011939 YP_002974615.1 CDS Rleg_0776 NC_012850.1 796486 796647 R hypothetical protein complement(796486..796647) Rhizobium leguminosarum bv. trifolii WSM1325 8011940 YP_002974616.1 CDS Rleg_0777 NC_012850.1 796644 797312 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: pst:PSPTO_0835 riboflavin biosynthesis protein RibD domain-containing protein; bifunctional deaminase-reductase domain-containing protein complement(796644..797312) Rhizobium leguminosarum bv. trifolii WSM1325 8011941 YP_002974617.1 CDS Rleg_0778 NC_012850.1 797520 798116 R KEGG: atc:AGR_pAT_413 hypothetical protein; hypothetical protein complement(797520..798116) Rhizobium leguminosarum bv. trifolii WSM1325 8011942 YP_002974618.1 CDS Rleg_0779 NC_012850.1 798135 798452 R KEGG: atc:AGR_pAT_414 hypothetical protein; hypothetical protein complement(798135..798452) Rhizobium leguminosarum bv. trifolii WSM1325 8011943 YP_002974619.1 CDS Rleg_0780 NC_012850.1 798799 799188 R PFAM: endoribonuclease L-PSP; KEGG: atc:AGR_C_2721 hypothetical protein; endoribonuclease L-PSP complement(798799..799188) Rhizobium leguminosarum bv. trifolii WSM1325 8011944 YP_002974620.1 CDS Rleg_0781 NC_012850.1 799344 799937 D PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein; TetR family transcriptional regulator 799344..799937 Rhizobium leguminosarum bv. trifolii WSM1325 8011945 YP_002974621.1 CDS Rleg_0782 NC_012850.1 800108 800395 D KEGG: rec:RHECIAT_CH0001159 transmembrane protein; transmembrane protein 800108..800395 Rhizobium leguminosarum bv. trifolii WSM1325 8011946 YP_002974622.1 CDS Rleg_0784 NC_012850.1 800589 801449 R PFAM: transglutaminase domain protein; KEGG: ret:RHE_PE00204 hypothetical protein; transglutaminase complement(800589..801449) Rhizobium leguminosarum bv. trifolii WSM1325 8011948 YP_002974623.1 CDS Rleg_0785 NC_012850.1 801760 802074 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: transcriptional regulator protein; ArsR family transcriptional regulator 801760..802074 Rhizobium leguminosarum bv. trifolii WSM1325 8011949 YP_002974624.1 CDS Rleg_0786 NC_012850.1 802071 802430 D KEGG: hypothetical protein; hypothetical protein 802071..802430 Rhizobium leguminosarum bv. trifolii WSM1325 8011950 YP_002974625.1 CDS clpP NC_012850.1 802477 803088 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 802477..803088 Rhizobium leguminosarum bv. trifolii WSM1325 8011951 YP_002974626.1 CDS Rleg_0788 NC_012850.1 803428 803646 D KEGG: sme:SMc00958 hypothetical protein; hypothetical protein 803428..803646 Rhizobium leguminosarum bv. trifolii WSM1325 8011952 YP_002974627.1 CDS Rleg_0789 NC_012850.1 803805 804062 D PFAM: transglycosylase-associated protein; KEGG: rec:RHECIAT_CH0001171 hypothetical conserved membrane protein; transglycosylase-associated protein 803805..804062 Rhizobium leguminosarum bv. trifolii WSM1325 8011953 YP_002974628.1 CDS Rleg_0790 NC_012850.1 804172 805056 R PFAM: protein of unknown function DUF1236; KEGG: rec:RHECIAT_CH0001818 hypothetical protein; hypothetical protein complement(804172..805056) Rhizobium leguminosarum bv. trifolii WSM1325 8011954 YP_002974629.1 CDS Rleg_0791 NC_012850.1 805158 805553 R PFAM: protein of unknown function DUF1236; KEGG: rec:RHECIAT_CH0001817 hypothetical protein; hypothetical protein complement(805158..805553) Rhizobium leguminosarum bv. trifolii WSM1325 8011955 YP_002974630.1 CDS Rleg_0792 NC_012850.1 805681 805953 R KEGG: ret:RHE_CH03187 hypothetical protein; hypothetical protein complement(805681..805953) Rhizobium leguminosarum bv. trifolii WSM1325 8011956 YP_002974631.1 CDS Rleg_0793 NC_012850.1 806345 807517 R PFAM: glycosyl transferase family 2; KEGG: rec:RHECIAT_CH0003441 probable glycosyltransferase protein; family 2 glycosyl transferase complement(806345..807517) Rhizobium leguminosarum bv. trifolii WSM1325 8011957 YP_002974632.1 CDS Rleg_0794 NC_012850.1 807779 808189 R hypothetical protein complement(807779..808189) Rhizobium leguminosarum bv. trifolii WSM1325 8011958 YP_002974633.1 CDS Rleg_0795 NC_012850.1 808648 809298 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: atc:AGR_L_779 probable NTP pyrophosphohydrolase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 808648..809298 Rhizobium leguminosarum bv. trifolii WSM1325 8011959 YP_002974634.1 CDS Rleg_0796 NC_012850.1 809532 809984 R KEGG: rec:RHECIAT_CH0000408 hypothetical protein; hypothetical protein complement(809532..809984) Rhizobium leguminosarum bv. trifolii WSM1325 8011960 YP_002974635.1 CDS Rleg_0797 NC_012850.1 810318 810794 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rec:RHECIAT_CH0003680 purine deaminase protein; zinc-binding CMP/dCMP deaminase 810318..810794 Rhizobium leguminosarum bv. trifolii WSM1325 8011961 YP_002974636.1 CDS Rleg_0798 NC_012850.1 810882 811451 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rec:RHECIAT_PC0000011 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(810882..811451) Rhizobium leguminosarum bv. trifolii WSM1325 8015482 YP_002974637.1 CDS Rleg_0799 NC_012850.1 811546 812250 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fabG; 3-oxoacyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR complement(811546..812250) Rhizobium leguminosarum bv. trifolii WSM1325 8011962 YP_002974638.1 CDS Rleg_0800 NC_012850.1 812367 813254 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: oan:Oant_3358 transcriptional regulator, LysR family; SNP /replace=A; LysR family transcriptional regulator 812367..813254 Rhizobium leguminosarum bv. trifolii WSM1325 8011963 YP_002974639.1 CDS Rleg_0801 NC_012850.1 813380 815614 R hypothetical protein complement(813380..815614) Rhizobium leguminosarum bv. trifolii WSM1325 8011964 YP_002974640.1 CDS Rleg_0802 NC_012850.1 815882 816865 R PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO6511 phosphotransferase family protein; aminoglycoside phosphotransferase complement(815882..816865) Rhizobium leguminosarum bv. trifolii WSM1325 8011965 YP_002974641.1 CDS Rleg_0803 NC_012850.1 817166 817456 D KEGG: ret:RHE_CH01070 hypothetical protein; hypothetical protein 817166..817456 Rhizobium leguminosarum bv. trifolii WSM1325 8011966 YP_002974642.1 CDS Rleg_0804 NC_012850.1 817458 817916 D hypothetical protein 817458..817916 Rhizobium leguminosarum bv. trifolii WSM1325 8011967 YP_002974643.1 CDS Rleg_0805 NC_012850.1 818608 818952 R SMART: regulatory protein ArsR; KEGG: ret:RHE_CH01046 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(818608..818952) Rhizobium leguminosarum bv. trifolii WSM1325 8011968 YP_002974644.1 CDS Rleg_0806 NC_012850.1 819060 819806 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0001175 probable 3-oxoacyl-[acyl-carrier protein] reductase protein; short-chain dehydrogenase/reductase SDR 819060..819806 Rhizobium leguminosarum bv. trifolii WSM1325 8011969 YP_002974645.1 CDS Rleg_0807 NC_012850.1 819989 820888 R PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc2598 transcription regulator protein; AraC family transcriptional regulator complement(819989..820888) Rhizobium leguminosarum bv. trifolii WSM1325 8011970 YP_002974646.1 CDS Rleg_0808 NC_012850.1 821040 821798 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA2925 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 821040..821798 Rhizobium leguminosarum bv. trifolii WSM1325 8015483 YP_002974647.1 CDS Rleg_0809 NC_012850.1 821843 822517 D PFAM: glutathione S-transferase domain; KEGG: rso:RSc2594 glutathione-S-transferase protein; glutathione S-transferase domain protein 821843..822517 Rhizobium leguminosarum bv. trifolii WSM1325 8011971 YP_002974648.1 CDS Rleg_0810 NC_012850.1 822474 823394 R PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc2591 transcriptional regulator transcription regulator protein; AraC family transcriptional regulator complement(822474..823394) Rhizobium leguminosarum bv. trifolii WSM1325 8011972 YP_002974649.1 CDS Rleg_0811 NC_012850.1 823549 823935 D PFAM: Limonene-12-epoxide hydrolase; KEGG: rso:RSc2590 hypothetical protein; limonene-12-epoxide hydrolase 823549..823935 Rhizobium leguminosarum bv. trifolii WSM1325 8011973 YP_002974650.1 CDS Rleg_0812 NC_012850.1 824403 824945 R PFAM: BA14K family protein; KEGG: rec:RHECIAT_CH0002901 hypothetical protein; BA14K family protein complement(824403..824945) Rhizobium leguminosarum bv. trifolii WSM1325 8011974 YP_002974651.1 CDS Rleg_0813 NC_012850.1 825503 825751 D hypothetical protein 825503..825751 Rhizobium leguminosarum bv. trifolii WSM1325 8015484 YP_002974652.1 CDS Rleg_0814 NC_012850.1 825840 826244 R KEGG: ccs:CCNA_02774 hypothetical protein; hypothetical protein complement(825840..826244) Rhizobium leguminosarum bv. trifolii WSM1325 8015485 YP_002974653.1 CDS Rleg_0815 NC_012850.1 826403 826837 R hypothetical protein complement(826403..826837) Rhizobium leguminosarum bv. trifolii WSM1325 8011975 YP_002974654.1 CDS Rleg_0816 NC_012850.1 826910 827800 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mex:Mext_1674 LysR substrate-binding; LysR family transcriptional regulator complement(826910..827800) Rhizobium leguminosarum bv. trifolii WSM1325 8011976 YP_002974655.1 CDS Rleg_0817 NC_012850.1 827905 828774 D PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; TrkA-N domain protein; KEGG: mch:Mchl_1991 NmrA family protein; NmrA family protein 827905..828774 Rhizobium leguminosarum bv. trifolii WSM1325 8011977 YP_002974656.1 CDS Rleg_0818 NC_012850.1 828808 829281 D PFAM: Domain of unknown function DUF1857; KEGG: cak:Caul_4034 hypothetical protein; hypothetical protein 828808..829281 Rhizobium leguminosarum bv. trifolii WSM1325 8011978 YP_002974657.1 CDS Rleg_0819 NC_012850.1 829347 830039 R PFAM: ThiJ/PfpI domain protein; KEGG: psb:Psyr_3319 ThiJ/PfpI; ThiJ/PfpI domain-containing protein complement(829347..830039) Rhizobium leguminosarum bv. trifolii WSM1325 8011979 YP_002974658.1 CDS Rleg_0820 NC_012850.1 830161 831093 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_2783 transcriptional regulator; LysR family transcriptional regulator 830161..831093 Rhizobium leguminosarum bv. trifolii WSM1325 8015486 YP_002974659.1 CDS Rleg_0821 NC_012850.1 831315 831689 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lactoylglutathione lyase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(831315..831689) Rhizobium leguminosarum bv. trifolii WSM1325 8011980 YP_002974660.1 CDS Rleg_0822 NC_012850.1 831798 832418 R PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH01074 glutathione S-transferase protein; glutathione S-transferase domain protein complement(831798..832418) Rhizobium leguminosarum bv. trifolii WSM1325 8011981 YP_002974661.1 CDS Rleg_0823 NC_012850.1 832411 832896 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ret:RHE_CH01075 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(832411..832896) Rhizobium leguminosarum bv. trifolii WSM1325 8011982 YP_002974662.1 CDS Rleg_0824 NC_012850.1 832889 833221 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ret:RHE_CH01076 transcriptional regulator protein; ArsR family transcriptional regulator complement(832889..833221) Rhizobium leguminosarum bv. trifolii WSM1325 8011983 YP_002974663.1 CDS Rleg_0825 NC_012850.1 833516 833836 R PFAM: DoxX family protein; KEGG: swi:Swit_0813 hypothetical protein; DoxX family protein complement(833516..833836) Rhizobium leguminosarum bv. trifolii WSM1325 8015487 YP_002974664.1 CDS Rleg_0826 NC_012850.1 833838 834218 R KEGG: scl:sce6646 hypothetical protein; hypothetical protein complement(833838..834218) Rhizobium leguminosarum bv. trifolii WSM1325 8015488 YP_002974665.1 CDS Rleg_0827 NC_012850.1 834342 834944 D PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein; TetR family transcriptional regulator 834342..834944 Rhizobium leguminosarum bv. trifolii WSM1325 8011984 YP_002974666.1 CDS Rleg_0828 NC_012850.1 835237 835599 D SMART: regulatory protein ArsR; KEGG: scl:sce8846 ArsR family transcriptional regulator; ArsR family transcriptional regulator 835237..835599 Rhizobium leguminosarum bv. trifolii WSM1325 8011985 YP_002974667.1 CDS Rleg_0829 NC_012850.1 835580 836074 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cak:Caul_4251 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 835580..836074 Rhizobium leguminosarum bv. trifolii WSM1325 8011986 YP_002974668.1 CDS Rleg_0830 NC_012850.1 836140 836874 R PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(836140..836874) Rhizobium leguminosarum bv. trifolii WSM1325 8011987 YP_002974669.1 CDS Rleg_0831 NC_012850.1 836992 838923 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rec:RHECIAT_PA0000051 adenylate cyclase protein; adenylate/guanylate cyclase complement(836992..838923) Rhizobium leguminosarum bv. trifolii WSM1325 8011988 YP_002974670.1 CDS Rleg_0832 NC_012850.1 839280 839609 R hypothetical protein complement(839280..839609) Rhizobium leguminosarum bv. trifolii WSM1325 8011989 YP_002974671.1 CDS Rleg_0833 NC_012850.1 839695 839991 D PFAM: plasmid maintenance system killer; KEGG: rru:Rru_A1064 plasmid maintenance system killer; plasmid maintenance system killer protein 839695..839991 Rhizobium leguminosarum bv. trifolii WSM1325 8011990 YP_002974672.1 CDS Rleg_0834 NC_012850.1 840001 840309 D KEGG: mlo:mlr1577 hypothetical protein; TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 840001..840309 Rhizobium leguminosarum bv. trifolii WSM1325 8015489 YP_002974673.1 CDS Rleg_0835 NC_012850.1 840438 840785 D KEGG: oan:Oant_0631 hypothetical protein; hypothetical protein 840438..840785 Rhizobium leguminosarum bv. trifolii WSM1325 8011991 YP_002974674.1 CDS Rleg_0836 NC_012850.1 840787 841140 D KEGG: rec:RHECIAT_CH0000572 hypothetical protein; hypothetical protein 840787..841140 Rhizobium leguminosarum bv. trifolii WSM1325 8011992 YP_002974675.1 CDS Rleg_0837 NC_012850.1 841176 841808 R KEGG: bja:blr4007 hypothetical protein; hypothetical protein complement(841176..841808) Rhizobium leguminosarum bv. trifolii WSM1325 8011993 YP_002974676.1 CDS Rleg_0838 NC_012850.1 841991 842620 R KEGG: hypothetical protein; hypothetical protein complement(841991..842620) Rhizobium leguminosarum bv. trifolii WSM1325 8011994 YP_002974677.1 CDS Rleg_0839 NC_012850.1 842692 843282 R PFAM: regulatory protein TetR; KEGG: mlo:mlr4666 TetR family transcriptional regulator; TetR family transcriptional regulator complement(842692..843282) Rhizobium leguminosarum bv. trifolii WSM1325 8011995 YP_002974678.1 CDS Rleg_0840 NC_012850.1 843481 844197 D PFAM: protein of unknown function DUF159; KEGG: rec:RHECIAT_CH0002677 hypothetical protein; hypothetical protein 843481..844197 Rhizobium leguminosarum bv. trifolii WSM1325 8011996 YP_002974679.1 CDS Rleg_0841 NC_012850.1 844272 844592 D KEGG: rec:RHECIAT_CH0002676 hypothetical protein; hypothetical protein 844272..844592 Rhizobium leguminosarum bv. trifolii WSM1325 8011997 YP_002974680.1 CDS Rleg_0842 NC_012850.1 844589 844828 D KEGG: rec:RHECIAT_CH0001154 hypothetical protein; hypothetical protein 844589..844828 Rhizobium leguminosarum bv. trifolii WSM1325 8011998 YP_002974681.1 CDS Rleg_0843 NC_012850.1 844853 845680 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: short-chain dehydrogenase protein; short chain dehydrogenase complement(844853..845680) Rhizobium leguminosarum bv. trifolii WSM1325 8011999 YP_002974682.1 CDS Rleg_0844 NC_012850.1 845760 846698 D PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: transcriptional regulator AraC family; AraC family transcriptional regulator 845760..846698 Rhizobium leguminosarum bv. trifolii WSM1325 8012000 YP_002974683.1 CDS Rleg_0845 NC_012850.1 846707 847309 R PFAM: regulatory protein TetR; HMG-I and HMG-Y DNA-binding domain protein; KEGG: sme:SMa2008 transcriptional regulator; TetR family transcriptional regulator complement(846707..847309) Rhizobium leguminosarum bv. trifolii WSM1325 8012001 YP_002974684.1 CDS Rleg_0846 NC_012850.1 847361 847810 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMa2009 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 847361..847810 Rhizobium leguminosarum bv. trifolii WSM1325 8012002 YP_002974685.1 CDS Rleg_0847 NC_012850.1 848004 848402 D hypothetical protein 848004..848402 Rhizobium leguminosarum bv. trifolii WSM1325 8012003 YP_002974686.1 CDS Rleg_0848 NC_012850.1 848588 848995 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH01040 hypothetical protein; glutathione-dependent formaldehyde-activating protein 848588..848995 Rhizobium leguminosarum bv. trifolii WSM1325 8012004 YP_002974687.1 CDS Rleg_0849 NC_012850.1 849390 849698 D KEGG: ret:RHE_CH01069 hypothetical protein; hypothetical protein 849390..849698 Rhizobium leguminosarum bv. trifolii WSM1325 8012005 YP_002974688.1 CDS Rleg_0850 NC_012850.1 849728 850189 D KEGG: hypothetical protein; hypothetical protein 849728..850189 Rhizobium leguminosarum bv. trifolii WSM1325 8012006 YP_002974689.1 CDS Rleg_0851 NC_012850.1 850277 851122 R PFAM: dienelactone hydrolase; KEGG: rec:RHECIAT_CH0001184 hydrolase protein; dienelactone hydrolase complement(850277..851122) Rhizobium leguminosarum bv. trifolii WSM1325 8012007 YP_002974690.1 CDS Rleg_0852 NC_012850.1 851521 851757 D KEGG: ret:RHE_CH01091 hypothetical protein; hypothetical protein 851521..851757 Rhizobium leguminosarum bv. trifolii WSM1325 8012008 YP_002974691.1 CDS Rleg_0853 NC_012850.1 851780 852253 D KEGG: ret:RHE_CH01092 terminase small subunit protein; terminase small subunit protein 851780..852253 Rhizobium leguminosarum bv. trifolii WSM1325 8012009 YP_002974692.1 CDS Rleg_0854 NC_012850.1 852219 852908 D KEGG: ret:RHE_CH01093 terminase large subunit protein; hypothetical protein 852219..852908 Rhizobium leguminosarum bv. trifolii WSM1325 8012010 YP_002974693.1 CDS Rleg_0855 NC_012850.1 852928 853140 D KEGG: rec:RHECIAT_CH0001190 hypothetical protein; hypothetical protein 852928..853140 Rhizobium leguminosarum bv. trifolii WSM1325 8012011 YP_002974694.1 CDS Rleg_0858 NC_012850.1 855007 855141 R hypothetical protein complement(855007..855141) Rhizobium leguminosarum bv. trifolii WSM1325 8012013 YP_002974695.1 CDS Rleg_0859 NC_012850.1 855262 855690 D KEGG: rec:RHECIAT_CH0001192 hypothetical protein; hypothetical protein 855262..855690 Rhizobium leguminosarum bv. trifolii WSM1325 8012014 YP_002974696.1 CDS Rleg_0860 NC_012850.1 855907 856092 D KEGG: rec:RHECIAT_CH0001193 hypothetical protein; hypothetical protein 855907..856092 Rhizobium leguminosarum bv. trifolii WSM1325 8012015 YP_002974697.1 CDS Rleg_0861 NC_012850.1 856710 856910 R KEGG: rec:RHECIAT_CH0001194 hypothetical protein; hypothetical protein complement(856710..856910) Rhizobium leguminosarum bv. trifolii WSM1325 8012016 YP_002974698.1 CDS Rleg_0862 NC_012850.1 857349 857531 R KEGG: smd:Smed_1340 hypothetical protein; hypothetical protein complement(857349..857531) Rhizobium leguminosarum bv. trifolii WSM1325 8015490 YP_002974699.1 CDS Rleg_0863 NC_012850.1 857762 858073 R hypothetical protein complement(857762..858073) Rhizobium leguminosarum bv. trifolii WSM1325 8012017 YP_002974700.1 CDS Rleg_0864 NC_012850.1 858215 858658 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sme:SMa1223 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(858215..858658) Rhizobium leguminosarum bv. trifolii WSM1325 8015491 YP_002974701.1 CDS Rleg_0865 NC_012850.1 858744 858890 R hypothetical protein complement(858744..858890) Rhizobium leguminosarum bv. trifolii WSM1325 8012018 YP_002974702.1 CDS Rleg_0866 NC_012850.1 858956 859318 R hypothetical protein complement(858956..859318) Rhizobium leguminosarum bv. trifolii WSM1325 8012019 YP_002974703.1 CDS Rleg_0867 NC_012850.1 859400 859663 R PFAM: protein of unknown function DUF1488; KEGG: atu:Atu0470 hypothetical protein; hypothetical protein complement(859400..859663) Rhizobium leguminosarum bv. trifolii WSM1325 8012020 YP_002974704.1 CDS Rleg_0868 NC_012850.1 859809 860111 R hypothetical protein complement(859809..860111) Rhizobium leguminosarum bv. trifolii WSM1325 8012021 YP_002974705.1 CDS Rleg_0869 NC_012850.1 860301 860705 D hypothetical protein 860301..860705 Rhizobium leguminosarum bv. trifolii WSM1325 8012022 YP_002974706.1 CDS Rleg_0870 NC_012850.1 860778 861152 D hypothetical protein 860778..861152 Rhizobium leguminosarum bv. trifolii WSM1325 8012023 YP_002974707.1 CDS Rleg_0871 NC_012850.1 861290 862792 R KEGG: ret:RHE_CH01120 serine protease DO-like protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do complement(861290..862792) Rhizobium leguminosarum bv. trifolii WSM1325 8012024 YP_002974708.1 CDS Rleg_0872 NC_012850.1 863358 864383 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_CH0001198 probable transcriptional regulator protein, LacI family; LacI family transcriptional regulator 863358..864383 Rhizobium leguminosarum bv. trifolii WSM1325 8012025 YP_002974709.1 CDS Rleg_0873 NC_012850.1 864494 865414 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH01122 LysR family transcriptional regulator; LysR family transcriptional regulator 864494..865414 Rhizobium leguminosarum bv. trifolii WSM1325 8012026 YP_002974710.1 CDS Rleg_0874 NC_012850.1 865475 866428 R PFAM: NmrA family protein; KEGG: rec:RHECIAT_CH0001200 hypothetical protein; NmrA family protein complement(865475..866428) Rhizobium leguminosarum bv. trifolii WSM1325 8012027 YP_002974711.1 CDS Rleg_0875 NC_012850.1 866692 867666 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_CH01124 quinone oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(866692..867666) Rhizobium leguminosarum bv. trifolii WSM1325 8012028 YP_002974712.1 CDS Rleg_0876 NC_012850.1 867712 868602 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH01125 LysR family transcriptional regulator; LysR family transcriptional regulator 867712..868602 Rhizobium leguminosarum bv. trifolii WSM1325 8012029 YP_002974713.1 CDS Rleg_0877 NC_012850.1 868754 869155 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SM_b21378 hypothetical protein; glutathione-dependent formaldehyde-activating protein 868754..869155 Rhizobium leguminosarum bv. trifolii WSM1325 8012030 YP_002974714.1 CDS Rleg_0878 NC_012850.1 869255 869659 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMa0112 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(869255..869659) Rhizobium leguminosarum bv. trifolii WSM1325 8012031 YP_002974715.1 CDS Rleg_0879 NC_012850.1 869963 870604 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rec:RHECIAT_CH0001202 peroxiredoxin protein; alkyl hydroperoxide reductase complement(869963..870604) Rhizobium leguminosarum bv. trifolii WSM1325 8012032 YP_002974716.1 CDS cysN NC_012850.1 871096 872592 R may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 complement(871096..872592) Rhizobium leguminosarum bv. trifolii WSM1325 8012033 YP_002974717.1 CDS Rleg_0881 NC_012850.1 872594 873547 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(872594..873547) Rhizobium leguminosarum bv. trifolii WSM1325 8015492 YP_002974718.1 CDS Rleg_0882 NC_012850.1 873700 874476 R KEGG: rec:RHECIAT_CH0001213 phosphoadenosine-phosphosulfate reductase protein; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase complement(873700..874476) Rhizobium leguminosarum bv. trifolii WSM1325 8012034 YP_002974719.1 CDS Rleg_0883 NC_012850.1 874898 875344 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ret:RHE_CH01133 transcriptional regulator protein; BadM/Rrf2 family transcriptional regulator 874898..875344 Rhizobium leguminosarum bv. trifolii WSM1325 8012035 YP_002974720.1 CDS Rleg_0884 NC_012850.1 875451 875939 D KEGG: rec:RHECIAT_CH0001215 hypothetical protein; hypothetical protein 875451..875939 Rhizobium leguminosarum bv. trifolii WSM1325 8015493 YP_002974721.1 CDS Rleg_0885 NC_012850.1 875959 876432 D KEGG: rec:RHECIAT_CH0001216 hypothetical protein; hypothetical protein 875959..876432 Rhizobium leguminosarum bv. trifolii WSM1325 8012036 YP_002974722.1 CDS Rleg_0886 NC_012850.1 876534 877073 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mno:Mnod_6446 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(876534..877073) Rhizobium leguminosarum bv. trifolii WSM1325 8012037 YP_002974723.1 CDS Rleg_0887 NC_012850.1 877163 877963 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_0308 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 877163..877963 Rhizobium leguminosarum bv. trifolii WSM1325 8012038 YP_002974724.1 CDS Rleg_0888 NC_012850.1 878058 879155 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bpy:Bphyt_4395 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 878058..879155 Rhizobium leguminosarum bv. trifolii WSM1325 8012039 YP_002974725.1 CDS Rleg_0889 NC_012850.1 879322 880971 R catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase complement(879322..880971) Rhizobium leguminosarum bv. trifolii WSM1325 8015494 YP_002974726.1 CDS Rleg_0890 NC_012850.1 881222 882685 R catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase complement(881222..882685) Rhizobium leguminosarum bv. trifolii WSM1325 8012040 YP_002974727.1 CDS Rleg_0891 NC_012850.1 882682 883308 R HTH-type; bet1; Repressor involved in choline regulation of the bet genes; BetI family transcriptional regulator complement(882682..883308) Rhizobium leguminosarum bv. trifolii WSM1325 8012041 YP_002974728.1 CDS Rleg_0892 NC_012850.1 883462 884010 D KEGG: ret:RHE_CH01139 hypothetical protein; hypothetical protein 883462..884010 Rhizobium leguminosarum bv. trifolii WSM1325 8012042 YP_002974729.1 CDS Rleg_0893 NC_012850.1 884229 884468 D KEGG: rec:RHECIAT_CH0001223 hypothetical protein; CopG/Arc/MetJ family transcriptional regulator 884229..884468 Rhizobium leguminosarum bv. trifolii WSM1325 8012043 YP_002974730.1 CDS Rleg_0894 NC_012850.1 884876 885874 D TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_CH01141 quinone oxidoreductase protein; NAD(P)H quinone oxidoreductase 884876..885874 Rhizobium leguminosarum bv. trifolii WSM1325 8012044 YP_002974731.1 CDS Rleg_0895 NC_012850.1 886082 887521 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0001227 transporter protein; major facilitator superfamily protein complement(886082..887521) Rhizobium leguminosarum bv. trifolii WSM1325 8012045 YP_002974732.1 CDS Rleg_0896 NC_012850.1 887623 888246 D KEGG: rec:RHECIAT_CH0001228 transcriptional regulator protein; transcriptional regulator 887623..888246 Rhizobium leguminosarum bv. trifolii WSM1325 8012046 YP_002974733.1 CDS Rleg_0897 NC_012850.1 888272 889483 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH01143 transporter, permease protein; major facilitator superfamily protein complement(888272..889483) Rhizobium leguminosarum bv. trifolii WSM1325 8012047 YP_002974734.1 CDS Rleg_0898 NC_012850.1 889671 890246 R KEGG: rec:RHECIAT_CH0001116 hypothetical protein; hypothetical protein complement(889671..890246) Rhizobium leguminosarum bv. trifolii WSM1325 8012048 YP_002974735.1 CDS Rleg_0899 NC_012850.1 890373 891380 D PFAM: L-asparaginase II; KEGG: rec:RHECIAT_CH0001230 L-asparaginase II protein; L-asparaginase II 890373..891380 Rhizobium leguminosarum bv. trifolii WSM1325 8012049 YP_002974736.1 CDS Rleg_0900 NC_012850.1 891512 892252 D KEGG: hypothetical protein; hypothetical protein 891512..892252 Rhizobium leguminosarum bv. trifolii WSM1325 8012050 YP_002974737.1 CDS Rleg_0901 NC_012850.1 892227 892982 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: rec:RHECIAT_CH0001231 probable transcriptional regulator protein, DeoR family; DeoR family transcriptional regulator complement(892227..892982) Rhizobium leguminosarum bv. trifolii WSM1325 8012051 YP_002974738.1 CDS Rleg_0902 NC_012850.1 893126 893482 D KEGG: rec:RHECIAT_CH0001232 hypothetical protein; hypothetical protein 893126..893482 Rhizobium leguminosarum bv. trifolii WSM1325 8015495 YP_002974739.1 CDS Rleg_0903 NC_012850.1 893844 894464 D PFAM: glutathione S-transferase domain; KEGG: rec:RHECIAT_CH0001233 glutathione S-transferase protein; glutathione S-transferase domain protein 893844..894464 Rhizobium leguminosarum bv. trifolii WSM1325 8012052 YP_002974740.1 CDS Rleg_0904 NC_012850.1 894449 894814 R PFAM: protein of unknown function DUF661; KEGG: hypothetical protein; hypothetical protein complement(894449..894814) Rhizobium leguminosarum bv. trifolii WSM1325 8012053 YP_002974741.1 CDS Rleg_0905 NC_012850.1 894853 895053 R KEGG: rec:RHECIAT_CH0001237 hypothetical protein; hypothetical protein complement(894853..895053) Rhizobium leguminosarum bv. trifolii WSM1325 8012054 YP_002974742.1 CDS Rleg_0906 NC_012850.1 895229 896125 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0001238 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 895229..896125 Rhizobium leguminosarum bv. trifolii WSM1325 8015496 YP_002974743.1 CDS Rleg_0907 NC_012850.1 896129 896794 R PFAM: glutathione S-transferase domain; KEGG: rec:RHECIAT_CH0001239 glutathione S-transferase protein; glutathione S-transferase domain protein complement(896129..896794) Rhizobium leguminosarum bv. trifolii WSM1325 8012055 YP_002974744.1 CDS Rleg_0908 NC_012850.1 896893 898242 R KEGG: rec:RHECIAT_CH0001243 hypothetical protein; hypothetical protein complement(896893..898242) Rhizobium leguminosarum bv. trifolii WSM1325 8012056 YP_002974745.1 CDS Rleg_0909 NC_012850.1 898466 900811 D KEGG: ret:RHE_CH01159 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 898466..900811 Rhizobium leguminosarum bv. trifolii WSM1325 8015497 YP_002974746.1 CDS Rleg_0910 NC_012850.1 900917 901888 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rec:RHECIAT_CH0001247 glycerophosphoryl diester phosphodiesterase protein; glycerophosphoryl diester phosphodiesterase complement(900917..901888) Rhizobium leguminosarum bv. trifolii WSM1325 8012057 YP_002974747.1 CDS Rleg_0911 NC_012850.1 901993 902823 D PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH01162 peroxidase protein; alpha/beta hydrolase 901993..902823 Rhizobium leguminosarum bv. trifolii WSM1325 8012058 YP_002974748.1 CDS Rleg_0912 NC_012850.1 903039 904397 D PFAM: tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: tetratricopeptide domain protein; KEGG: gsu:GSU2476 TPR domain-containing protein; hypothetical protein 903039..904397 Rhizobium leguminosarum bv. trifolii WSM1325 8012059 YP_002974749.1 CDS Rleg_0913 NC_012850.1 904595 905605 D KEGG: rec:RHECIAT_CH0001249 exonuclease protein involved in mRNA processing; exonuclease protein involved in mRNA processing 904595..905605 Rhizobium leguminosarum bv. trifolii WSM1325 8012060 YP_002974750.1 CDS Rleg_0915 NC_012850.1 905868 907493 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 905868..907493 Rhizobium leguminosarum bv. trifolii WSM1325 8012062 YP_002974751.1 CDS Rleg_0916 NC_012850.1 907490 907609 D hypothetical protein 907490..907609 Rhizobium leguminosarum bv. trifolii WSM1325 8012063 YP_002974752.1 CDS Rleg_0917 NC_012850.1 907606 908526 D KEGG: ret:RHE_CH01165 aminopeptidase protein; aminopeptidase protein 907606..908526 Rhizobium leguminosarum bv. trifolii WSM1325 8012064 YP_002974753.1 CDS Rleg_0918 NC_012850.1 908606 908809 D KEGG: rec:RHECIAT_CH0001252 hypothetical protein; hypothetical protein 908606..908809 Rhizobium leguminosarum bv. trifolii WSM1325 8012065 YP_002974754.1 CDS Rleg_0919 NC_012850.1 908865 909563 D PFAM: Domain of unknown function DUF1814; KEGG: rec:RHECIAT_CH0001253 hypothetical protein; hypothetical protein 908865..909563 Rhizobium leguminosarum bv. trifolii WSM1325 8012066 YP_002974755.1 CDS Rleg_0920 NC_012850.1 909664 910470 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_CH01167 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 909664..910470 Rhizobium leguminosarum bv. trifolii WSM1325 8012067 YP_002974756.1 CDS Rleg_0921 NC_012850.1 910648 911382 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0001255 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 910648..911382 Rhizobium leguminosarum bv. trifolii WSM1325 8012068 YP_002974757.1 CDS Rleg_0922 NC_012850.1 911709 911918 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ret:RHE_CH01169 cold shock protein; cold-shock protein 911709..911918 Rhizobium leguminosarum bv. trifolii WSM1325 8012069 YP_002974758.1 CDS Rleg_0923 NC_012850.1 912170 912454 D KEGG: ret:RHE_CH01170 hypothetical protein; hypothetical protein 912170..912454 Rhizobium leguminosarum bv. trifolii WSM1325 8012070 YP_002974759.1 CDS rpsU NC_012850.1 912511 912750 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 912511..912750 Rhizobium leguminosarum bv. trifolii WSM1325 8012071 YP_002974760.1 CDS Rleg_0925 NC_012850.1 912976 913200 D KEGG: rec:RHECIAT_CH0001259 hypothetical protein; hypothetical protein 912976..913200 Rhizobium leguminosarum bv. trifolii WSM1325 8012072 YP_002974761.1 CDS Rleg_0926 NC_012850.1 913260 913736 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_CH01173 MarR family transcriptional regulator; MarR family transcriptional regulator complement(913260..913736) Rhizobium leguminosarum bv. trifolii WSM1325 8012073 YP_002974762.1 CDS Rleg_0927 NC_012850.1 913871 914293 D PFAM: OsmC family protein; KEGG: ret:RHE_CH01174 organic hydroperoxide resistance (osmotically inducible) protein; OsmC family protein 913871..914293 Rhizobium leguminosarum bv. trifolii WSM1325 8012074 YP_002974763.1 CDS Rleg_0928 NC_012850.1 914638 915084 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0001262 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator complement(914638..915084) Rhizobium leguminosarum bv. trifolii WSM1325 8012075 YP_002974764.1 CDS Rleg_0929 NC_012850.1 915173 915901 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rec:RHECIAT_CH0001263 hypothetical protein; hypothetical protein 915173..915901 Rhizobium leguminosarum bv. trifolii WSM1325 8012076 YP_002974765.1 CDS Rleg_0930 NC_012850.1 915936 916400 D PFAM: protein of unknown function DUF1579; KEGG: rec:RHECIAT_CH0001264 hypothetical protein; hypothetical protein 915936..916400 Rhizobium leguminosarum bv. trifolii WSM1325 8012077 YP_002974766.1 CDS Rleg_0931 NC_012850.1 916480 917259 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0001265 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 916480..917259 Rhizobium leguminosarum bv. trifolii WSM1325 8012078 YP_002974767.1 CDS Rleg_0932 NC_012850.1 917316 917933 R KEGG: hypothetical protein; hypothetical protein complement(917316..917933) Rhizobium leguminosarum bv. trifolii WSM1325 8012079 YP_002974768.1 CDS Rleg_0933 NC_012850.1 918100 919626 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001266 probable ABC transporter, ATP-binding protein; ABC transporter complement(918100..919626) Rhizobium leguminosarum bv. trifolii WSM1325 8012080 YP_002974769.1 CDS Rleg_0934 NC_012850.1 920010 920507 D KEGG: smd:Smed_1952 membrane-bound metal-dependent hydrolase; membrane-bound metal-dependent hydrolase 920010..920507 Rhizobium leguminosarum bv. trifolii WSM1325 8012081 YP_002974770.1 CDS Rleg_0935 NC_012850.1 920515 922107 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH01180 ABC transporter ATP-binding protein; SNP /replace=C; ABC transporter complement(920515..922107) Rhizobium leguminosarum bv. trifolii WSM1325 8012082 YP_002974771.1 CDS Rleg_0936 NC_012850.1 922455 924020 R PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: rec:RHECIAT_CH0001269 ATP-binding protein; hypothetical protein complement(922455..924020) Rhizobium leguminosarum bv. trifolii WSM1325 8015498 YP_002974772.1 CDS Rleg_0937 NC_012850.1 924244 924636 D KEGG: ret:RHE_CH01182 hypothetical protein; hypothetical protein 924244..924636 Rhizobium leguminosarum bv. trifolii WSM1325 8012083 YP_002974773.1 CDS Rleg_0938 NC_012850.1 924734 925189 D PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0001271 hydrolase protein; NUDIX hydrolase 924734..925189 Rhizobium leguminosarum bv. trifolii WSM1325 8012084 YP_002974774.1 CDS Rleg_0939 NC_012850.1 925321 925608 D KEGG: ret:RHE_CH01184 hypothetical protein; hypothetical protein 925321..925608 Rhizobium leguminosarum bv. trifolii WSM1325 8012085 YP_002974775.1 CDS Rleg_0940 NC_012850.1 925642 927150 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(925642..927150) Rhizobium leguminosarum bv. trifolii WSM1325 8012086 YP_002974776.1 CDS Rleg_0941 NC_012850.1 927288 928058 R catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase complement(927288..928058) Rhizobium leguminosarum bv. trifolii WSM1325 8015499 YP_002974777.1 CDS Rleg_0942 NC_012850.1 928172 929446 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: rec:RHECIAT_CH0001275 hemolysin protein; hypothetical protein complement(928172..929446) Rhizobium leguminosarum bv. trifolii WSM1325 8012087 YP_002974778.1 CDS Rleg_0943 NC_012850.1 930099 932480 D PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: sme:SMc00975 chemoreceptor methyl-accepting chemotaxis transmembrane protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 930099..932480 Rhizobium leguminosarum bv. trifolii WSM1325 8012088 YP_002974779.1 CDS Rleg_0944 NC_012850.1 932656 933198 D KEGG: bam:Bamb_5223 hypothetical protein; hypothetical protein 932656..933198 Rhizobium leguminosarum bv. trifolii WSM1325 8012089 YP_002974780.1 CDS Rleg_0945 NC_012850.1 933195 933608 D PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2205 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 933195..933608 Rhizobium leguminosarum bv. trifolii WSM1325 8012090 YP_002974781.1 CDS Rleg_0946 NC_012850.1 933734 934243 D KEGG: rec:RHECIAT_CH0002440 hypothetical protein; hypothetical protein 933734..934243 Rhizobium leguminosarum bv. trifolii WSM1325 8015500 YP_002974782.1 CDS Rleg_0947 NC_012850.1 934303 934767 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH01188 hypothetical protein; cupin complement(934303..934767) Rhizobium leguminosarum bv. trifolii WSM1325 8012091 YP_002974783.1 CDS Rleg_0948 NC_012850.1 935041 935211 R hypothetical protein complement(935041..935211) Rhizobium leguminosarum bv. trifolii WSM1325 8012092 YP_002974784.1 CDS Rleg_0949 NC_012850.1 935214 936032 D PFAM: xylose isomerase; KEGG: hypothetical protein; xylose isomerase 935214..936032 Rhizobium leguminosarum bv. trifolii WSM1325 8012093 YP_002974785.1 CDS Rleg_0950 NC_012850.1 936282 937325 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_CH01189 alcohol dehydrogenase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(936282..937325) Rhizobium leguminosarum bv. trifolii WSM1325 8012094 YP_002974786.1 CDS Rleg_0951 NC_012850.1 937574 938461 D PFAM: aminotransferase class IV; KEGG: ret:RHE_CH01190 aminotransferase; aminotransferase 937574..938461 Rhizobium leguminosarum bv. trifolii WSM1325 8012095 YP_002974787.1 CDS Rleg_0952 NC_012850.1 938656 939201 R KEGG: rec:RHECIAT_CH0001282 hypothetical protein; hypothetical protein complement(938656..939201) Rhizobium leguminosarum bv. trifolii WSM1325 8012096 YP_002974788.1 CDS Rleg_0953 NC_012850.1 939368 940270 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0001283 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(939368..940270) Rhizobium leguminosarum bv. trifolii WSM1325 8012097 YP_002974789.1 CDS Rleg_0954 NC_012850.1 940408 941649 D PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0001284 probable protein secretion protein, HlyD family; secretion protein HlyD family protein 940408..941649 Rhizobium leguminosarum bv. trifolii WSM1325 8012098 YP_002974790.1 CDS Rleg_0955 NC_012850.1 941748 943367 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0001285 probable multidrug resistance efflux system protein; EmrB/QacA subfamily drug resistance transporter 941748..943367 Rhizobium leguminosarum bv. trifolii WSM1325 8012099 YP_002974791.1 CDS Rleg_0956 NC_012850.1 943398 944603 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH01194 adenylate cyclase protein; adenylate/guanylate cyclase 943398..944603 Rhizobium leguminosarum bv. trifolii WSM1325 8015501 YP_002974792.1 CDS nadE NC_012850.1 944951 945784 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 944951..945784 Rhizobium leguminosarum bv. trifolii WSM1325 8012100 YP_002974793.1 CDS Rleg_0958 NC_012850.1 945827 946510 R PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH01196 glutathione S-transferase protein; glutathione S-transferase domain protein complement(945827..946510) Rhizobium leguminosarum bv. trifolii WSM1325 8012101 YP_002974794.1 CDS Rleg_0959 NC_012850.1 946587 947246 D PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0001289 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 946587..947246 Rhizobium leguminosarum bv. trifolii WSM1325 8012102 YP_002974795.1 CDS Rleg_0960 NC_012850.1 947243 948484 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH01198 multi-drug resistance efflux system protein; major facilitator superfamily protein complement(947243..948484) Rhizobium leguminosarum bv. trifolii WSM1325 8012103 YP_002974796.1 CDS Rleg_0962 NC_012850.1 948818 949162 D KEGG: ret:RHE_CH01199 hypothetical protein; hypothetical protein 948818..949162 Rhizobium leguminosarum bv. trifolii WSM1325 8012104 YP_002974797.1 CDS Rleg_0963 NC_012850.1 949190 949921 R PFAM: protein of unknown function DUF81; KEGG: rec:RHECIAT_CH0001292 hypothetical conserved membrane protein; hypothetical protein complement(949190..949921) Rhizobium leguminosarum bv. trifolii WSM1325 8012105 YP_002974798.1 CDS Rleg_0964 NC_012850.1 949983 950636 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rec:RHECIAT_CH0001293 phosphatidylethanolamine N-methyltransferase protein; phosphatidylethanolamine N-methyltransferase complement(949983..950636) Rhizobium leguminosarum bv. trifolii WSM1325 8012106 YP_002974799.1 CDS Rleg_0965 NC_012850.1 950744 951070 R KEGG: rec:RHECIAT_CH0001294 hypothetical protein; hypothetical protein complement(950744..951070) Rhizobium leguminosarum bv. trifolii WSM1325 8012107 YP_002974800.1 CDS Rleg_0966 NC_012850.1 951296 951898 D PFAM: manganese and iron superoxide dismutase; KEGG: rec:RHECIAT_CH0001295 superoxide dismutase protein; superoxide dismutase 951296..951898 Rhizobium leguminosarum bv. trifolii WSM1325 8015503 YP_002974801.1 CDS Rleg_0967 NC_012850.1 952040 952885 D PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0001296 probable phosphatase protein; metallophosphoesterase 952040..952885 Rhizobium leguminosarum bv. trifolii WSM1325 8012108 YP_002974802.1 CDS Rleg_0968 NC_012850.1 952882 953790 R PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: transcriptional regulator protein; AraC family transcriptional regulator complement(952882..953790) Rhizobium leguminosarum bv. trifolii WSM1325 8012109 YP_002974803.1 CDS Rleg_0969 NC_012850.1 953968 954738 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dehydrogenase/reductase protein; short-chain dehydrogenase/reductase SDR 953968..954738 Rhizobium leguminosarum bv. trifolii WSM1325 8012110 YP_002974804.1 CDS Rleg_0970 NC_012850.1 954761 955453 R PFAM: hypothetical protein; KEGG: rec:RHECIAT_CH0001297 transcriptional regulator protein; hypothetical protein complement(954761..955453) Rhizobium leguminosarum bv. trifolii WSM1325 8012111 YP_002974805.1 CDS Rleg_0971 NC_012850.1 955584 956219 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0001298 amino acid efflux protein, LysE family; lysine exporter protein LysE/YggA 955584..956219 Rhizobium leguminosarum bv. trifolii WSM1325 8012112 YP_002974806.1 CDS Rleg_0972 NC_012850.1 956412 956852 D PFAM: cytochrome C prime; KEGG: rec:RHECIAT_CH0001303 cytochrome C556 signal peptide protein; cytochrome C prime 956412..956852 Rhizobium leguminosarum bv. trifolii WSM1325 8012113 YP_002974807.1 CDS Rleg_0973 NC_012850.1 957016 957930 D KEGG: rec:RHECIAT_CH0001304 diheme cytochrome C signal peptide protein; gluconate 2-dehydrogenase (acceptor) 957016..957930 Rhizobium leguminosarum bv. trifolii WSM1325 8012114 YP_002974808.1 CDS Rleg_0974 NC_012850.1 958057 958686 R PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH01216 glutathione S-transferase protein; glutathione S-transferase domain protein complement(958057..958686) Rhizobium leguminosarum bv. trifolii WSM1325 8012115 YP_002974809.1 CDS Rleg_0975 NC_012850.1 958876 959370 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0001305 acetyltransferase protein; N-acetyltransferase GCN5 complement(958876..959370) Rhizobium leguminosarum bv. trifolii WSM1325 8012116 YP_002974810.1 CDS Rleg_0976 NC_012850.1 959639 959911 D PFAM: protein of unknown function DUF156; KEGG: rec:RHECIAT_CH0001306 hypothetical protein; hypothetical protein 959639..959911 Rhizobium leguminosarum bv. trifolii WSM1325 8012117 YP_002974811.1 CDS Rleg_0977 NC_012850.1 960017 961015 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ret:RHE_CH01219 cation efflux system protein; cation diffusion facilitator family transporter 960017..961015 Rhizobium leguminosarum bv. trifolii WSM1325 8012118 YP_002974812.1 CDS Rleg_0978 NC_012850.1 961162 962076 D PFAM: beta-lactamase; KEGG: rec:RHECIAT_CH0001308 beta-lactamase protein; beta-lactamase 961162..962076 Rhizobium leguminosarum bv. trifolii WSM1325 8012119 YP_002974813.1 CDS Rleg_0979 NC_012850.1 962136 962600 R KEGG: cak:Caul_5096 hypothetical protein; hypothetical protein complement(962136..962600) Rhizobium leguminosarum bv. trifolii WSM1325 8015504 YP_002974814.1 CDS Rleg_0980 NC_012850.1 962672 965011 R KEGG: rec:RHECIAT_CH0001309 glucose dehydrogenase (pyrroloquinoline-quinone) protein; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone; membrane-bound PQQ-dependent dehydrogenase complement(962672..965011) Rhizobium leguminosarum bv. trifolii WSM1325 8012120 YP_002974815.1 CDS Rleg_0981 NC_012850.1 965219 966949 R PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: multidrug resistance ABC transporter; ABC transporter complement(965219..966949) Rhizobium leguminosarum bv. trifolii WSM1325 8012121 YP_002974816.1 CDS Rleg_0982 NC_012850.1 967105 968607 R PFAM: protein of unknown function UPF0061; KEGG: rec:RHECIAT_CH0001310 hypothetical protein; hypothetical protein complement(967105..968607) Rhizobium leguminosarum bv. trifolii WSM1325 8015505 YP_002974817.1 CDS Rleg_0983 NC_012850.1 968849 970303 D PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0001311 probable efflux transporter protein; major facilitator superfamily protein 968849..970303 Rhizobium leguminosarum bv. trifolii WSM1325 8012122 YP_002974818.1 CDS Rleg_0984 NC_012850.1 970401 971348 R PFAM: homocysteine S-methyltransferase; KEGG: smd:Smed_0597 homocysteine S-methyltransferase; homocysteine S-methyltransferase complement(970401..971348) Rhizobium leguminosarum bv. trifolii WSM1325 8012123 YP_002974819.1 CDS Rleg_0985 NC_012850.1 971567 972235 D PFAM: regulatory protein TetR; KEGG: pzu:PHZ_c0609 transcriptional regulator, TetR family; TetR family transcriptional regulator 971567..972235 Rhizobium leguminosarum bv. trifolii WSM1325 8012124 YP_002974820.1 CDS Rleg_0986 NC_012850.1 972247 972771 R PFAM: protein of unknown function DUF1697; KEGG: ret:RHE_CH01225 hypothetical protein; hypothetical protein complement(972247..972771) Rhizobium leguminosarum bv. trifolii WSM1325 8012125 YP_002974821.1 CDS Rleg_0987 NC_012850.1 972998 975106 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: ret:RHE_CH01226 protease II protein; oligopeptidase B complement(972998..975106) Rhizobium leguminosarum bv. trifolii WSM1325 8012126 YP_002974822.1 CDS Rleg_0988 NC_012850.1 975357 975746 D PFAM: protein of unknown function DUF930; KEGG: ret:RHE_CH01227 hypothetical protein; hypothetical protein 975357..975746 Rhizobium leguminosarum bv. trifolii WSM1325 8012127 YP_002974823.1 CDS Rleg_0989 NC_012850.1 975861 976721 D PFAM: polysaccharide deacetylase; KEGG: rec:RHECIAT_CH0001315 polysaccharide deacetylase protein; polysaccharide deacetylase 975861..976721 Rhizobium leguminosarum bv. trifolii WSM1325 8012128 YP_002974824.1 CDS Rleg_0990 NC_012850.1 976807 977364 D KEGG: hypothetical protein; hypothetical protein 976807..977364 Rhizobium leguminosarum bv. trifolii WSM1325 8012129 YP_002974825.1 CDS Rleg_0991 NC_012850.1 977377 978675 R PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_CH0001316 sarcosine oxidase protein; FAD dependent oxidoreductase complement(977377..978675) Rhizobium leguminosarum bv. trifolii WSM1325 8012130 YP_002974826.1 CDS Rleg_0992 NC_012850.1 978694 979884 R PFAM: protein of unknown function UPF0118; KEGG: ret:RHE_CH01230 permease protein; hypothetical protein complement(978694..979884) Rhizobium leguminosarum bv. trifolii WSM1325 8012131 YP_002974827.1 CDS Rleg_0993 NC_012850.1 980061 980921 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0001319 glyoxylase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(980061..980921) Rhizobium leguminosarum bv. trifolii WSM1325 8012132 YP_002974828.1 CDS Rleg_0994 NC_012850.1 981215 981634 D PFAM: UspA domain protein; KEGG: ret:RHE_CH01233 universal stress protein; UspA domain-containing protein 981215..981634 Rhizobium leguminosarum bv. trifolii WSM1325 8012133 YP_002974829.1 CDS Rleg_0995 NC_012850.1 981751 982419 D PFAM: Hly-III family protein; KEGG: ret:RHE_CH01234 hemolysin III protein; Hly-III family protein 981751..982419 Rhizobium leguminosarum bv. trifolii WSM1325 8012134 YP_002974830.1 CDS Rleg_0996 NC_012850.1 982486 983037 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0001322 probable phosphinothricin acetyltransferase (antibiotic resistance) protein; N-acetyltransferase GCN5 982486..983037 Rhizobium leguminosarum bv. trifolii WSM1325 8012135 YP_002974831.1 CDS Rleg_0997 NC_012850.1 983257 983970 D PFAM: pentapeptide repeat protein; KEGG: rec:RHECIAT_CH0001323 hypothetical protein; pentapeptide repeat-containing protein 983257..983970 Rhizobium leguminosarum bv. trifolii WSM1325 8012136 YP_002974832.1 CDS Rleg_0998 NC_012850.1 984066 984479 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(984066..984479) Rhizobium leguminosarum bv. trifolii WSM1325 8012137 YP_002974833.1 CDS Rleg_0999 NC_012850.1 984669 984884 D KEGG: rec:RHECIAT_CH0001337 hypothetical protein; hypothetical protein 984669..984884 Rhizobium leguminosarum bv. trifolii WSM1325 8012138 YP_002974834.1 CDS Rleg_1000 NC_012850.1 985093 987450 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 985093..987450 Rhizobium leguminosarum bv. trifolii WSM1325 8012139 YP_002974835.1 CDS Rleg_1001 NC_012850.1 987455 987874 D subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit B 987455..987874 Rhizobium leguminosarum bv. trifolii WSM1325 8015506 YP_002974836.1 CDS Rleg_1002 NC_012850.1 987871 988251 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 987871..988251 Rhizobium leguminosarum bv. trifolii WSM1325 8012140 YP_002974837.1 CDS Rleg_1003 NC_012850.1 988316 989869 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit D 988316..989869 Rhizobium leguminosarum bv. trifolii WSM1325 8015507 YP_002974838.1 CDS Rleg_1004 NC_012850.1 989866 990339 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 989866..990339 Rhizobium leguminosarum bv. trifolii WSM1325 8012141 YP_002974839.1 CDS Rleg_1005 NC_012850.1 990336 990689 D subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit F 990336..990689 Rhizobium leguminosarum bv. trifolii WSM1325 8012142 YP_002974840.1 CDS Rleg_1006 NC_012850.1 990686 991018 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit G 990686..991018 Rhizobium leguminosarum bv. trifolii WSM1325 8015508 YP_002974841.1 CDS Rleg_1007 NC_012850.1 991459 991890 D PFAM: ROSMUCR transcriptional regulator; KEGG: ret:RHE_CH01249 transcriptional regulator protein - nodulation competitiveness determinant; MucR family transcriptional regulator 991459..991890 Rhizobium leguminosarum bv. trifolii WSM1325 8012143 YP_002974842.1 CDS Rleg_1008 NC_012850.1 992166 992588 R PFAM: Fe-S metabolism associated SufE; KEGG: rec:RHECIAT_CH0001346 Fe-S metabolism associated protein; Fe-S metabolism associated SufE complement(992166..992588) Rhizobium leguminosarum bv. trifolii WSM1325 8012144 YP_002974843.1 CDS Rleg_1009 NC_012850.1 992836 993330 R KEGG: rec:RHECIAT_CH0001347 hypothetical protein; hypothetical protein complement(992836..993330) Rhizobium leguminosarum bv. trifolii WSM1325 8015509 YP_002974844.1 CDS Rleg_1010 NC_012850.1 993812 995323 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rec:RHECIAT_CH0001348 probable two-component sensor histidine kinase protein; histidine kinase 993812..995323 Rhizobium leguminosarum bv. trifolii WSM1325 8015510 YP_002974845.1 CDS Rleg_1011 NC_012850.1 995295 996248 D PFAM: peptidoglycan-binding domain 1 protein; KEGG: rec:RHECIAT_CH0001349 peptidoglycan binding (cell wall degradation) protein; peptidoglycan-binding domain 1 protein 995295..996248 Rhizobium leguminosarum bv. trifolii WSM1325 8012145 YP_002974846.1 CDS Rleg_1012 NC_012850.1 996352 997389 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr1976 transcriptional regulator; AraC family transcriptional regulator complement(996352..997389) Rhizobium leguminosarum bv. trifolii WSM1325 8012146 YP_002974847.1 CDS Rleg_1013 NC_012850.1 997446 998420 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2444 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 997446..998420 Rhizobium leguminosarum bv. trifolii WSM1325 8012147 YP_002974848.1 CDS Rleg_1014 NC_012850.1 998556 1000004 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: ret:RHE_CH01254 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 998556..1000004 Rhizobium leguminosarum bv. trifolii WSM1325 8012148 YP_002974849.1 CDS Rleg_1015 NC_012850.1 1000116 1000460 D PFAM: protein of unknown function DUF1491; KEGG: ret:RHE_CH01255 hypothetical protein; hypothetical protein 1000116..1000460 Rhizobium leguminosarum bv. trifolii WSM1325 8015511 YP_002974850.1 CDS Rleg_1016 NC_012850.1 1000531 1001580 R KEGG: rec:RHECIAT_CH0001352 hypothetical protein; hypothetical protein complement(1000531..1001580) Rhizobium leguminosarum bv. trifolii WSM1325 8012149 YP_002974851.1 CDS Rleg_1017 NC_012850.1 1001829 1002032 R KEGG: hypothetical protein; hypothetical protein complement(1001829..1002032) Rhizobium leguminosarum bv. trifolii WSM1325 8012150 YP_002974852.1 CDS Rleg_1018 NC_012850.1 1002423 1002533 R KEGG: rec:RHECIAT_CH0001354 hypothetical protein; hypothetical protein complement(1002423..1002533) Rhizobium leguminosarum bv. trifolii WSM1325 8012151 YP_002974853.1 CDS Rleg_1019 NC_012850.1 1002573 1002740 D hypothetical protein 1002573..1002740 Rhizobium leguminosarum bv. trifolii WSM1325 8012152 YP_002974854.1 CDS Rleg_1020 NC_012850.1 1002754 1003302 R KEGG: ret:RHE_CH01259 hypothetical protein; hypothetical protein complement(1002754..1003302) Rhizobium leguminosarum bv. trifolii WSM1325 8012153 YP_002974855.1 CDS Rleg_1021 NC_012850.1 1003295 1003882 R PFAM: protein of unknown function DUF1214; KEGG: rec:RHECIAT_CH0001356 hypothetical conserved membrane protein; hypothetical protein complement(1003295..1003882) Rhizobium leguminosarum bv. trifolii WSM1325 8012154 YP_002974856.1 CDS Rleg_1022 NC_012850.1 1004088 1006298 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rec:RHECIAT_CH0001357 cell wall biosynthesis penicillin-binding protein, 1A family; penicillin-binding protein complement(1004088..1006298) Rhizobium leguminosarum bv. trifolii WSM1325 8015512 YP_002974857.1 CDS Rleg_1023 NC_012850.1 1006359 1006460 D hypothetical protein 1006359..1006460 Rhizobium leguminosarum bv. trifolii WSM1325 8012155 YP_002974858.1 CDS Rleg_1024 NC_012850.1 1006502 1006978 D PFAM: protein of unknown function UPF0153; KEGG: rec:RHECIAT_CH0001358 hypothetical protein; hypothetical protein 1006502..1006978 Rhizobium leguminosarum bv. trifolii WSM1325 8012156 YP_002974859.1 CDS Rleg_1025 NC_012850.1 1007205 1008188 D PFAM: Integral membrane protein TerC; KEGG: TerC family protein ; K05794 tellurite resistance protein TerC; integral membrane protein TerC 1007205..1008188 Rhizobium leguminosarum bv. trifolii WSM1325 8015513 YP_002974860.1 CDS Rleg_1026 NC_012850.1 1008233 1008535 D KEGG: hypothetical protein; hypothetical protein 1008233..1008535 Rhizobium leguminosarum bv. trifolii WSM1325 8012157 YP_002974861.1 CDS Rleg_1027 NC_012850.1 1008528 1009190 D PFAM: Exopolysaccharide synthesis ExoD; KEGG: exopolysaccharide biosynthesis protein; Exopolysaccharide synthesis ExoD 1008528..1009190 Rhizobium leguminosarum bv. trifolii WSM1325 8015514 YP_002974862.1 CDS Rleg_1028 NC_012850.1 1009187 1009756 R PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0001359 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(1009187..1009756) Rhizobium leguminosarum bv. trifolii WSM1325 8012158 YP_002974863.1 CDS Rleg_1029 NC_012850.1 1009927 1010841 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH01264 short chain dehydrogenase; short chain dehydrogenase 1009927..1010841 Rhizobium leguminosarum bv. trifolii WSM1325 8012159 YP_002974864.1 CDS Rleg_1030 NC_012850.1 1010942 1012000 R PFAM: fatty acid desaturase; KEGG: rec:RHECIAT_CH0001361 probable fatty acid desaturase protein; fatty acid desaturase complement(1010942..1012000) Rhizobium leguminosarum bv. trifolii WSM1325 8012160 YP_002974865.1 CDS Rleg_1031 NC_012850.1 1012039 1012155 R hypothetical protein complement(1012039..1012155) Rhizobium leguminosarum bv. trifolii WSM1325 8012161 YP_002974866.1 CDS Rleg_1032 NC_012850.1 1012289 1012432 R KEGG: msl:Msil_1057 hypothetical protein; hypothetical protein complement(1012289..1012432) Rhizobium leguminosarum bv. trifolii WSM1325 8012162 YP_002974867.1 CDS Rleg_1033 NC_012850.1 1012902 1013237 R hypothetical protein complement(1012902..1013237) Rhizobium leguminosarum bv. trifolii WSM1325 8012163 YP_002974868.1 CDS Rleg_1034 NC_012850.1 1013334 1013630 R KEGG: rec:RHECIAT_CH0001363 hypothetical protein; hypothetical protein complement(1013334..1013630) Rhizobium leguminosarum bv. trifolii WSM1325 8012164 YP_002974869.1 CDS Rleg_1035 NC_012850.1 1013808 1015208 R PFAM: major facilitator superfamily MFS_1; KEGG: efflux transporter; major facilitator superfamily protein complement(1013808..1015208) Rhizobium leguminosarum bv. trifolii WSM1325 8012165 YP_002974870.1 CDS Rleg_1036 NC_012850.1 1015332 1016294 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nodD3; nod transcriptional regulator protein; LysR family transcriptional regulator 1015332..1016294 Rhizobium leguminosarum bv. trifolii WSM1325 8012166 YP_002974871.1 CDS Rleg_1037 NC_012850.1 1016302 1016682 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0001366 probable lactoylglutathione lyase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(1016302..1016682) Rhizobium leguminosarum bv. trifolii WSM1325 8012167 YP_002974872.1 CDS Rleg_1038 NC_012850.1 1016873 1017715 R PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: transglutaminase-like protein; transglutaminase complement(1016873..1017715) Rhizobium leguminosarum bv. trifolii WSM1325 8012168 YP_002974873.1 CDS Rleg_1039 NC_012850.1 1017743 1018018 R PFAM: protein of unknown function DUF1488; KEGG: sme:SMa1910 hypothetical protein; hypothetical protein complement(1017743..1018018) Rhizobium leguminosarum bv. trifolii WSM1325 8015515 YP_002974874.1 CDS Rleg_1040 NC_012850.1 1018009 1018338 R KEGG: ret:RHE_CH01267 hypothetical protein; hypothetical protein complement(1018009..1018338) Rhizobium leguminosarum bv. trifolii WSM1325 8012169 YP_002974875.1 CDS Rleg_1041 NC_012850.1 1018335 1018670 R KEGG: ret:RHE_CH01268 hypothetical protein; hypothetical protein complement(1018335..1018670) Rhizobium leguminosarum bv. trifolii WSM1325 8012170 YP_002974876.1 CDS Rleg_1042 NC_012850.1 1018667 1018930 R KEGG: ret:RHE_CH01269 hypothetical protein; hypothetical protein complement(1018667..1018930) Rhizobium leguminosarum bv. trifolii WSM1325 8012171 YP_002974877.1 CDS Rleg_1043 NC_012850.1 1019443 1019760 D PFAM: chaperonin Cpn10; KEGG: ret:RHE_CH01270 10 kDa chaperonin, heat shock protein; chaperonin Cpn10 1019443..1019760 Rhizobium leguminosarum bv. trifolii WSM1325 8012172 YP_002974878.1 CDS groEL NC_012850.1 1019810 1021444 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the R. leguminosarum protein in this cluster is transcribed under anaerobic conditions and is not necessary for growth; chaperonin GroEL 1019810..1021444 Rhizobium leguminosarum bv. trifolii WSM1325 8012173 YP_002974879.1 CDS Rleg_1045 NC_012850.1 1021511 1021903 D KEGG: ret:RHE_CH01272 hypothetical protein; hypothetical protein 1021511..1021903 Rhizobium leguminosarum bv. trifolii WSM1325 8012174 YP_002974880.1 CDS Rleg_1046 NC_012850.1 1021969 1022130 D KEGG: sme:SMa0121 hypothetical protein; hypothetical protein 1021969..1022130 Rhizobium leguminosarum bv. trifolii WSM1325 8012175 YP_002974881.1 CDS Rleg_1047 NC_012850.1 1022234 1023400 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: oxidoreductase protein; oxidoreductase domain-containing protein complement(1022234..1023400) Rhizobium leguminosarum bv. trifolii WSM1325 8012176 YP_002974882.1 CDS Rleg_1048 NC_012850.1 1023408 1024331 R PFAM: xylose isomerase; KEGG: myo-inositol catabolism protein ; K03335 myo-inositol catabolism protein IolE; myo-inosose-2 dehydratase complement(1023408..1024331) Rhizobium leguminosarum bv. trifolii WSM1325 8012177 YP_002974883.1 CDS Rleg_1049 NC_012850.1 1024373 1025287 R PFAM: xylose isomerase; KEGG: iolE; myo-inositol catabolism protein ; K06605 myo-inositol catabolism protein IolH; xylose isomerase complement(1024373..1025287) Rhizobium leguminosarum bv. trifolii WSM1325 8012178 YP_002974884.1 CDS Rleg_1050 NC_012850.1 1025457 1026497 D PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: transcriptional regulator protein ; K02529 LacI family transcriptional regulator; LacI family transcriptional regulator 1025457..1026497 Rhizobium leguminosarum bv. trifolii WSM1325 8012179 YP_002974885.1 CDS Rleg_1051 NC_012850.1 1026565 1027470 R SMART: PDZ/DHR/GLGF domain protein; KEGG: rec:RHECIAT_CH0001367 probable serine protease protein; PDZ/DHR/GLGF domain-containing protein complement(1026565..1027470) Rhizobium leguminosarum bv. trifolii WSM1325 8012180 YP_002974886.1 CDS Rleg_1052 NC_012850.1 1027627 1028571 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: transcriptional regulator protein; AraC family transcriptional regulator complement(1027627..1028571) Rhizobium leguminosarum bv. trifolii WSM1325 8012181 YP_002974887.1 CDS Rleg_1053 NC_012850.1 1028698 1029657 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C7081 oxidoreductase; oxidoreductase 1028698..1029657 Rhizobium leguminosarum bv. trifolii WSM1325 8012182 YP_002974888.1 CDS Rleg_1054 NC_012850.1 1030035 1031438 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0001368 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator 1030035..1031438 Rhizobium leguminosarum bv. trifolii WSM1325 8012183 YP_002974889.1 CDS Rleg_1055 NC_012850.1 1031750 1032118 D PFAM: protein of unknown function DUF983; KEGG: rec:RHECIAT_CH0001369 hypothetical conserved membrane protein; hypothetical protein 1031750..1032118 Rhizobium leguminosarum bv. trifolii WSM1325 8012184 YP_002974890.1 CDS Rleg_1056 NC_012850.1 1032228 1033127 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0001370 transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(1032228..1033127) Rhizobium leguminosarum bv. trifolii WSM1325 8012185 YP_002974891.1 CDS Rleg_1057 NC_012850.1 1033270 1033881 D PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH01278 glutathione S-transferase protein; glutathione S-transferase domain protein 1033270..1033881 Rhizobium leguminosarum bv. trifolii WSM1325 8012186 YP_002974892.1 CDS Rleg_1058 NC_012850.1 1033943 1034875 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ret:RHE_CH01279 pyridoxine 5'-phosphate oxidase protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1033943..1034875 Rhizobium leguminosarum bv. trifolii WSM1325 8012187 YP_002974893.1 CDS Rleg_1059 NC_012850.1 1034961 1035422 D PFAM: protein of unknown function DUF1348; KEGG: rec:RHECIAT_CH0001373 hypothetical protein; hypothetical protein 1034961..1035422 Rhizobium leguminosarum bv. trifolii WSM1325 8012188 YP_002974894.1 CDS Rleg_1060 NC_012850.1 1035443 1036003 D PFAM: regulatory protein TetR; KEGG: ret:RHE_CH01281 TetR family transcriptional regulator; TetR family transcriptional regulator 1035443..1036003 Rhizobium leguminosarum bv. trifolii WSM1325 8012189 YP_002974895.1 CDS Rleg_1061 NC_012850.1 1036153 1036284 R KEGG: rec:RHECIAT_CH0001375 hypothetical protein; hypothetical protein complement(1036153..1036284) Rhizobium leguminosarum bv. trifolii WSM1325 8012190 YP_002974896.1 CDS Rleg_1062 NC_012850.1 1036441 1037145 D KEGG: rec:RHECIAT_CH0001376 hypothetical protein; hypothetical protein 1036441..1037145 Rhizobium leguminosarum bv. trifolii WSM1325 8012191 YP_002974897.1 CDS Rleg_1063 NC_012850.1 1037197 1037502 D PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: ret:RHE_CH01283 hypothetical protein; Stress responsive alpha-beta barrel domain protein 1037197..1037502 Rhizobium leguminosarum bv. trifolii WSM1325 8012192 YP_002974898.1 CDS Rleg_1064 NC_012850.1 1037742 1038968 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0001378 transporter, permease protein; SNP /replace=A; major facilitator superfamily protein complement(1037742..1038968) Rhizobium leguminosarum bv. trifolii WSM1325 8012193 YP_002974899.1 CDS Rleg_1065 NC_012850.1 1039342 1039590 D KEGG: ret:RHE_CH01285 hypothetical protein; hypothetical protein 1039342..1039590 Rhizobium leguminosarum bv. trifolii WSM1325 8012194 YP_002974900.1 CDS Rleg_1066 NC_012850.1 1039646 1040317 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0001381 two-component response regulator protein; transcriptional regulator 1039646..1040317 Rhizobium leguminosarum bv. trifolii WSM1325 8015516 YP_002974901.1 CDS Rleg_1067 NC_012850.1 1040307 1041710 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rec:RHECIAT_CH0001382 two-component sensor histidine kinase protein; histidine kinase 1040307..1041710 Rhizobium leguminosarum bv. trifolii WSM1325 8012195 YP_002974902.1 CDS Rleg_1068 NC_012850.1 1041829 1042251 D KEGG: rec:RHECIAT_CH0001383 outer membrane lipoprotein-related protein; outer membrane lipoprotein-related protein 1041829..1042251 Rhizobium leguminosarum bv. trifolii WSM1325 8012196 YP_002974903.1 CDS Rleg_1069 NC_012850.1 1042404 1043612 D TIGRFAM: cytochrome C-type biogenesis protein CcmI; PFAM: tetratricopeptide TPR_2 repeat protein; KEGG: ret:RHE_CH01289 cytochrome-C-type biogenesis protein; cytochrome C-type biogenesis protein CcmI 1042404..1043612 Rhizobium leguminosarum bv. trifolii WSM1325 8015517 YP_002974904.1 CDS Rleg_1070 NC_012850.1 1043609 1044106 D CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome C maturation system; periplasmic protein anchored to the inner membrane; cytochrome C-type biogenesis protein CcmE 1043609..1044106 Rhizobium leguminosarum bv. trifolii WSM1325 8012197 YP_002974905.1 CDS Rleg_1071 NC_012850.1 1044103 1046100 D TIGRFAM: cytochrome C-type biogenesis protein CcmF; PFAM: cytochrome C assembly protein; KEGG: rec:RHECIAT_CH0001386 cytochrome C biosynthesis protein; cytochrome C-type biogenesis protein CcmF 1044103..1046100 Rhizobium leguminosarum bv. trifolii WSM1325 8012198 YP_002974906.1 CDS Rleg_1072 NC_012850.1 1046097 1046552 D PFAM: cytochrome C biogenesis protein; KEGG: rec:RHECIAT_CH0001387 cytochrome C biogenesis protein; cytochrome C biogenesis protein 1046097..1046552 Rhizobium leguminosarum bv. trifolii WSM1325 8012199 YP_002974907.1 CDS Rleg_1073 NC_012850.1 1046768 1048351 D KEGG: rec:RHECIAT_CH0001388 serine protease Do protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do 1046768..1048351 Rhizobium leguminosarum bv. trifolii WSM1325 8012200 YP_002974908.1 CDS Rleg_1074 NC_012850.1 1048427 1049173 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0001389 two-component response regulator protein; transcriptional regulator 1048427..1049173 Rhizobium leguminosarum bv. trifolii WSM1325 8012201 YP_002974909.1 CDS Rleg_1075 NC_012850.1 1049170 1050579 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH01295 two-component sensor histidine kinase protein; histidine kinase 1049170..1050579 Rhizobium leguminosarum bv. trifolii WSM1325 8012202 YP_002974910.1 CDS Rleg_1076 NC_012850.1 1050815 1053772 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1050815..1053772 Rhizobium leguminosarum bv. trifolii WSM1325 8012203 YP_002974911.1 CDS Rleg_1077 NC_012850.1 1053873 1054523 D PFAM: glutathione S-transferase domain; KEGG: rec:RHECIAT_CH0001098 probable glutathione S-transferase protein; glutathione S-transferase domain protein 1053873..1054523 Rhizobium leguminosarum bv. trifolii WSM1325 8012204 YP_002974912.1 CDS Rleg_1078 NC_012850.1 1054536 1056845 R KEGG: rec:RHECIAT_CH0001392 probable two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1054536..1056845) Rhizobium leguminosarum bv. trifolii WSM1325 8015518 YP_002974913.1 CDS pepN NC_012850.1 1057038 1059686 R TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: rec:RHECIAT_CH0001393 aminopeptidase N protein; aminopeptidase N complement(1057038..1059686) Rhizobium leguminosarum bv. trifolii WSM1325 8012205 YP_002974914.1 CDS Rleg_1080 NC_012850.1 1059875 1060981 R KEGG: mcpV2; methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(1059875..1060981) Rhizobium leguminosarum bv. trifolii WSM1325 8012206 YP_002974915.1 CDS Rleg_1081 NC_012850.1 1061329 1062267 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH01299 permease protein; hypothetical protein 1061329..1062267 Rhizobium leguminosarum bv. trifolii WSM1325 8015519 YP_002974916.1 CDS Rleg_1082 NC_012850.1 1062513 1063385 D KEGG: ret:RHE_CH01300 hypothetical protein; hypothetical protein 1062513..1063385 Rhizobium leguminosarum bv. trifolii WSM1325 8012207 YP_002974917.1 CDS Rleg_1083 NC_012850.1 1063386 1063541 R hypothetical protein complement(1063386..1063541) Rhizobium leguminosarum bv. trifolii WSM1325 8012208 YP_002974918.1 CDS Rleg_1084 NC_012850.1 1063586 1063777 R KEGG: rec:RHECIAT_CH0001397 hypothetical protein; hypothetical protein complement(1063586..1063777) Rhizobium leguminosarum bv. trifolii WSM1325 8012209 YP_002974919.1 CDS Rleg_1085 NC_012850.1 1063909 1064808 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rec:RHECIAT_CH0001398 probable DNA-directed DNA polymerase protein (uracil-DNA glycosylase); phage SPO1 DNA polymerase-related protein complement(1063909..1064808) Rhizobium leguminosarum bv. trifolii WSM1325 8012210 YP_002974920.1 CDS Rleg_1086 NC_012850.1 1064878 1066170 R KEGG: rec:RHECIAT_CH0001399 molecular chaperone heat shock protein (HSP70); molecular chaperone heat shock protein (HSP70) complement(1064878..1066170) Rhizobium leguminosarum bv. trifolii WSM1325 8012211 YP_002974921.1 CDS Rleg_1087 NC_012850.1 1066390 1069506 R PFAM: acriflavin resistance protein; KEGG: rec:RHECIAT_CH0001400 probable multidrug efflux transporter protein; acriflavin resistance protein complement(1066390..1069506) Rhizobium leguminosarum bv. trifolii WSM1325 8012212 YP_002974922.1 CDS Rleg_1088 NC_012850.1 1069503 1070798 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0001401 probable protein secretion protein, HlyD family; RND family efflux transporter MFP subunit complement(1069503..1070798) Rhizobium leguminosarum bv. trifolii WSM1325 8012213 YP_002974923.1 CDS Rleg_1089 NC_012850.1 1071094 1071972 D PFAM: aminoglycoside phosphotransferase; KEGG: ret:RHE_CH01306 aminoglycoside phosphotransferase protein (antibiotic resistance protein); aminoglycoside phosphotransferase 1071094..1071972 Rhizobium leguminosarum bv. trifolii WSM1325 8012214 YP_002974924.1 CDS Rleg_1090 NC_012850.1 1071983 1072771 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH01307 3-oxoacyl-[acyl-carrier-protein] reductase protein; short-chain dehydrogenase/reductase SDR complement(1071983..1072771) Rhizobium leguminosarum bv. trifolii WSM1325 8012215 YP_002974925.1 CDS Rleg_1091 NC_012850.1 1073023 1074687 D PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase; KEGG: ret:RHE_CH01308 electrotransfer ubiquinone oxidoreductase protein; electron-transferring-flavoprotein dehydrogenase 1073023..1074687 Rhizobium leguminosarum bv. trifolii WSM1325 8012216 YP_002974926.1 CDS Rleg_1092 NC_012850.1 1074823 1075437 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0001405 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1074823..1075437 Rhizobium leguminosarum bv. trifolii WSM1325 8012217 YP_002974927.1 CDS Rleg_1093 NC_012850.1 1075536 1076441 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0001406 permease membrane protein; hypothetical protein complement(1075536..1076441) Rhizobium leguminosarum bv. trifolii WSM1325 8012218 YP_002974928.1 CDS Rleg_1094 NC_012850.1 1076586 1077059 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_CH0001407 transcriptional regulator protein, AsnC family; AsnC family transcriptional regulator 1076586..1077059 Rhizobium leguminosarum bv. trifolii WSM1325 8015520 YP_002974929.1 CDS Rleg_1095 NC_012850.1 1077083 1078456 R KEGG: ret:RHE_CH01312 magnesium (mg2+) transporter protein; TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; magnesium transporter complement(1077083..1078456) Rhizobium leguminosarum bv. trifolii WSM1325 8012219 YP_002974930.1 CDS Rleg_1096 NC_012850.1 1078771 1079784 R TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: zinc-dependent alcohol dehydrogenase protein; zinc-binding alcohol dehydrogenase family protein complement(1078771..1079784) Rhizobium leguminosarum bv. trifolii WSM1325 8012220 YP_002974931.1 CDS Rleg_1097 NC_012850.1 1079888 1080292 D PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator protein; HxlR family transcriptional regulator 1079888..1080292 Rhizobium leguminosarum bv. trifolii WSM1325 8015521 YP_002974932.1 CDS Rleg_1098 NC_012850.1 1080251 1081477 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0001409 permease protein; major facilitator superfamily protein complement(1080251..1081477) Rhizobium leguminosarum bv. trifolii WSM1325 8012221 YP_002974933.1 CDS Rleg_1099 NC_012850.1 1081777 1082721 D PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: ret:RHE_CH01314 diacylglycerol kinase protein; diacylglycerol kinase catalytic subunit 1081777..1082721 Rhizobium leguminosarum bv. trifolii WSM1325 8012222 YP_002974934.1 CDS Rleg_1100 NC_012850.1 1082740 1084116 R PFAM: glutamine synthetase catalytic region; KEGG: ret:RHE_CH01315 glutamine synthetase protein; glutamate--putrescine ligase complement(1082740..1084116) Rhizobium leguminosarum bv. trifolii WSM1325 8015522 YP_002974935.1 CDS Rleg_1101 NC_012850.1 1084174 1085541 D PFAM: aminotransferase class-III; KEGG: ret:RHE_CH01316 aminotransferase; aminotransferase 1084174..1085541 Rhizobium leguminosarum bv. trifolii WSM1325 8012223 YP_002974936.1 CDS Rleg_1102 NC_012850.1 1085567 1085728 R KEGG: atc:AGR_C_1993 hypothetical protein; hypothetical protein complement(1085567..1085728) Rhizobium leguminosarum bv. trifolii WSM1325 8012224 YP_002974937.1 CDS Rleg_1103 NC_012850.1 1085874 1086125 R PFAM: protein of unknown function UPF0156; KEGG: rec:RHECIAT_CH0001414 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein complement(1085874..1086125) Rhizobium leguminosarum bv. trifolii WSM1325 8012225 YP_002974938.1 CDS Rleg_1104 NC_012850.1 1086304 1087791 R KEGG: rec:RHECIAT_CH0001415 glycosyltransferase protein; glycosyltransferase complement(1086304..1087791) Rhizobium leguminosarum bv. trifolii WSM1325 8012226 YP_002974939.1 CDS Rleg_1105 NC_012850.1 1087793 1089292 R KEGG: rec:RHECIAT_CH0001416 glycosyltransferase protein; glycosyltransferase complement(1087793..1089292) Rhizobium leguminosarum bv. trifolii WSM1325 8012227 YP_002974940.1 CDS Rleg_1106 NC_012850.1 1089305 1090321 R PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH01319 glycosyltransferase; family 2 glycosyl transferase complement(1089305..1090321) Rhizobium leguminosarum bv. trifolii WSM1325 8012228 YP_002974941.1 CDS Rleg_1107 NC_012850.1 1090459 1091949 R PFAM: glycosyl transferase family 39; KEGG: rec:RHECIAT_CH0001418 glycosyltransferase protein; glycosyl transferase family protein complement(1090459..1091949) Rhizobium leguminosarum bv. trifolii WSM1325 8012229 YP_002974942.1 CDS Rleg_1108 NC_012850.1 1092126 1093088 D KEGG: ret:RHE_CH01321 hypothetical protein; hypothetical protein 1092126..1093088 Rhizobium leguminosarum bv. trifolii WSM1325 8012230 YP_002974943.1 CDS Rleg_1109 NC_012850.1 1093056 1094297 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; tetratricopeptide TPR_2 repeat protein; KEGG: ret:RHE_CH01322 RNA polymerase sigma factor protein (sigma-70); ECF subfamily RNA polymerase sigma-24 subunit complement(1093056..1094297) Rhizobium leguminosarum bv. trifolii WSM1325 8012231 YP_002974944.1 CDS Rleg_1110 NC_012850.1 1094307 1094666 R PFAM: YCII-related; KEGG: ret:RHE_CH01323 hypothetical protein; hypothetical protein complement(1094307..1094666) Rhizobium leguminosarum bv. trifolii WSM1325 8012232 YP_002974945.1 CDS Rleg_1111 NC_012850.1 1094669 1095028 R PFAM: YCII-related; KEGG: ret:RHE_CH01324 hypothetical protein; hypothetical protein complement(1094669..1095028) Rhizobium leguminosarum bv. trifolii WSM1325 8012233 YP_002974946.1 CDS Rleg_1112 NC_012850.1 1095039 1095395 R PFAM: YCII-related; KEGG: rec:RHECIAT_CH0001423 hypothetical protein; hypothetical protein complement(1095039..1095395) Rhizobium leguminosarum bv. trifolii WSM1325 8015523 YP_002974947.1 CDS Rleg_1113 NC_012850.1 1095550 1095765 D KEGG: ret:RHE_CH01326 hypothetical protein; hypothetical protein 1095550..1095765 Rhizobium leguminosarum bv. trifolii WSM1325 8012234 YP_002974948.1 CDS Rleg_1114 NC_012850.1 1095775 1097277 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(1095775..1097277) Rhizobium leguminosarum bv. trifolii WSM1325 8012235 YP_002974949.1 CDS Rleg_1115 NC_012850.1 1097462 1097641 R KEGG: rec:RHECIAT_CH0001426 hypothetical protein; hypothetical protein complement(1097462..1097641) Rhizobium leguminosarum bv. trifolii WSM1325 8012236 YP_002974950.1 CDS Rleg_1116 NC_012850.1 1097852 1098148 R PFAM: plasmid stabilization system; KEGG: pde:Pden_0144 plasmid stabilization system; plasmid stabilization system complement(1097852..1098148) Rhizobium leguminosarum bv. trifolii WSM1325 8012237 YP_002974951.1 CDS Rleg_1117 NC_012850.1 1098145 1098414 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: sme:SM_b20628 hypothetical protein; CopG family transcriptional regulator complement(1098145..1098414) Rhizobium leguminosarum bv. trifolii WSM1325 8012238 YP_002974952.1 CDS Rleg_1118 NC_012850.1 1098487 1098825 R KEGG: ret:RHE_CH01328 hypothetical protein; hypothetical protein complement(1098487..1098825) Rhizobium leguminosarum bv. trifolii WSM1325 8012239 YP_002974953.1 CDS Rleg_1119 NC_012850.1 1099270 1099536 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: ret:RHE_CH01329 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 1099270..1099536 Rhizobium leguminosarum bv. trifolii WSM1325 8012240 YP_002974954.1 CDS Rleg_1120 NC_012850.1 1099674 1100789 R catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate; histidinol-phosphate aminotransferase complement(1099674..1100789) Rhizobium leguminosarum bv. trifolii WSM1325 8012241 YP_002974955.1 CDS Rleg_1121 NC_012850.1 1100887 1101288 R KEGG: rec:RHECIAT_CH0001430 hypothetical protein; hypothetical protein complement(1100887..1101288) Rhizobium leguminosarum bv. trifolii WSM1325 8015524 YP_002974956.1 CDS Rleg_1122 NC_012850.1 1101488 1101889 R KEGG: rec:RHECIAT_CH0001431 hypothetical protein; hypothetical protein complement(1101488..1101889) Rhizobium leguminosarum bv. trifolii WSM1325 8012242 YP_002974957.1 CDS Rleg_1123 NC_012850.1 1102051 1102497 D KEGG: rec:RHECIAT_CH0001432 hypothetical protein; hypothetical protein 1102051..1102497 Rhizobium leguminosarum bv. trifolii WSM1325 8012243 YP_002974958.1 CDS Rleg_1124 NC_012850.1 1102545 1103411 R PFAM: regulatory protein LysR; KEGG: ret:RHE_CH01336 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1102545..1103411) Rhizobium leguminosarum bv. trifolii WSM1325 8015525 YP_002974959.1 CDS Rleg_1125 NC_012850.1 1103502 1103765 D hypothetical protein 1103502..1103765 Rhizobium leguminosarum bv. trifolii WSM1325 8012244 YP_002974960.1 CDS Rleg_1126 NC_012850.1 1103716 1104048 R KEGG: ret:RHE_CH01337 hypothetical protein; hypothetical protein complement(1103716..1104048) Rhizobium leguminosarum bv. trifolii WSM1325 8012245 YP_002974961.1 CDS Rleg_1127 NC_012850.1 1104404 1104844 D KEGG: rec:RHECIAT_CH0001436 hypothetical protein; hypothetical protein 1104404..1104844 Rhizobium leguminosarum bv. trifolii WSM1325 8012246 YP_002974962.1 CDS Rleg_1128 NC_012850.1 1104926 1106293 D PFAM: multi antimicrobial extrusion protein MatE; KEGG: rec:RHECIAT_CH0001437 multidrug efflux protein, MatE family; multi antimicrobial extrusion protein MatE 1104926..1106293 Rhizobium leguminosarum bv. trifolii WSM1325 8012247 YP_002974963.1 CDS Rleg_1129 NC_012850.1 1106398 1106559 R KEGG: mlo:msr3035 hypothetical protein; hypothetical protein complement(1106398..1106559) Rhizobium leguminosarum bv. trifolii WSM1325 8012248 YP_002974964.1 CDS Rleg_1130 NC_012850.1 1106763 1107596 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH01340 transcriptional regulator protein; AraC family transcriptional regulator complement(1106763..1107596) Rhizobium leguminosarum bv. trifolii WSM1325 8012249 YP_002974965.1 CDS Rleg_1131 NC_012850.1 1107663 1107872 R PFAM: protein of unknown function DUF1127; KEGG: hypothetical protein; hypothetical protein complement(1107663..1107872) Rhizobium leguminosarum bv. trifolii WSM1325 8012250 YP_002974966.1 CDS Rleg_1132 NC_012850.1 1107962 1108759 R PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ret:RHE_CH01341 myo-inositol catabolism protein; Myo-inositol catabolism IolB domain-containing protein complement(1107962..1108759) Rhizobium leguminosarum bv. trifolii WSM1325 8012251 YP_002974967.1 CDS Rleg_1133 NC_012850.1 1108957 1109874 R PFAM: xylose isomerase; KEGG: iolE; myo-inositol catabolism protein ; K03335 myo-inositol catabolism protein IolE; myo-inosose-2 dehydratase complement(1108957..1109874) Rhizobium leguminosarum bv. trifolii WSM1325 8012252 YP_002974968.1 CDS Rleg_1134 NC_012850.1 1109938 1111788 R PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ret:RHE_CH01343 myo-inositol catabolism, acetolactate synthase protein; thiamine pyrophosphate protein central region complement(1109938..1111788) Rhizobium leguminosarum bv. trifolii WSM1325 8012253 YP_002974969.1 CDS Rleg_1135 NC_012850.1 1111987 1113921 R PFAM: PfkB domain protein; KEGG: rec:RHECIAT_CH0001441 5-dehydro-2-deoxygluconokinase protein (myo-inositol catabolism); PfkB domain-containing protein complement(1111987..1113921) Rhizobium leguminosarum bv. trifolii WSM1325 8012254 YP_002974970.1 CDS Rleg_1136 NC_012850.1 1114014 1114889 R PFAM: sugar isomerase (SIS); KEGG: rec:RHECIAT_CH0001442 transcriptional regulator protein; RpiR family transcriptional regulator complement(1114014..1114889) Rhizobium leguminosarum bv. trifolii WSM1325 8015526 YP_002974971.1 CDS Rleg_1137 NC_012850.1 1115096 1116211 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0001443 dehydrogenase/oxidoreductase protein; oxidoreductase domain-containing protein 1115096..1116211 Rhizobium leguminosarum bv. trifolii WSM1325 8012255 YP_002974972.1 CDS Rleg_1138 NC_012850.1 1116398 1117615 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rec:RHECIAT_CH0001444 probable ferredoxin-NAD(+) reductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1116398..1117615 Rhizobium leguminosarum bv. trifolii WSM1325 8012256 YP_002974973.1 CDS Rleg_1139 NC_012850.1 1118432 1119439 D PFAM: porin; KEGG: ret:RHE_CH01349 porin outer membrane protein; porin 1118432..1119439 Rhizobium leguminosarum bv. trifolii WSM1325 8012258 YP_002974974.1 CDS Rleg_1140 NC_012850.1 1119542 1120438 R PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH01379 hydrolase protein; alpha/beta hydrolase complement(1119542..1120438) Rhizobium leguminosarum bv. trifolii WSM1325 8012259 YP_002974975.1 CDS Rleg_1141 NC_012850.1 1120504 1122579 R PFAM: Lytic transglycosylase catalytic; KEGG: rec:RHECIAT_CH0001448 probable murein transglycosylase protein; lytic transglycosylase complement(1120504..1122579) Rhizobium leguminosarum bv. trifolii WSM1325 8012260 YP_002974976.1 CDS Rleg_1142 NC_012850.1 1122794 1123678 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1122794..1123678 Rhizobium leguminosarum bv. trifolii WSM1325 8012261 YP_002974977.1 CDS smpB NC_012850.1 1123781 1124260 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1123781..1124260 Rhizobium leguminosarum bv. trifolii WSM1325 8012262 YP_002974978.1 CDS Rleg_1144 NC_012850.1 1124329 1124910 R PFAM: protein of unknown function DUF88; KEGG: ret:RHE_CH01383 hypothetical protein; hypothetical protein complement(1124329..1124910) Rhizobium leguminosarum bv. trifolii WSM1325 8012263 YP_002974979.1 CDS Rleg_1145 NC_012850.1 1125208 1125612 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1125208..1125612 Rhizobium leguminosarum bv. trifolii WSM1325 8015527 YP_002974980.1 CDS Rleg_1146 NC_012850.1 1125817 1128051 D KEGG: rec:RHECIAT_CH0001453 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase protein; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 1125817..1128051 Rhizobium leguminosarum bv. trifolii WSM1325 8012264 YP_002974981.1 CDS Rleg_1147 NC_012850.1 1128245 1128394 D KEGG: ret:RHE_CH01386 hypothetical protein; hypothetical protein 1128245..1128394 Rhizobium leguminosarum bv. trifolii WSM1325 8012265 YP_002974982.1 CDS Rleg_1148 NC_012850.1 1128555 1129145 D KEGG: ret:RHE_CH01387 hypothetical protein; hypothetical protein 1128555..1129145 Rhizobium leguminosarum bv. trifolii WSM1325 8015528 YP_002974983.1 CDS acpS NC_012850.1 1129184 1129588 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1129184..1129588 Rhizobium leguminosarum bv. trifolii WSM1325 8012266 YP_002974984.1 CDS Rleg_1150 NC_012850.1 1129746 1130489 D KEGG: rec:RHECIAT_CH0001457 signal peptidase I protein; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1129746..1130489 Rhizobium leguminosarum bv. trifolii WSM1325 8012267 YP_002974985.1 CDS Rleg_1151 NC_012850.1 1130486 1131205 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1130486..1131205 Rhizobium leguminosarum bv. trifolii WSM1325 8012268 YP_002974986.1 CDS era NC_012850.1 1131213 1132154 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1131213..1132154 Rhizobium leguminosarum bv. trifolii WSM1325 8012269 YP_002974987.1 CDS Rleg_1153 NC_012850.1 1132305 1133057 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; KEGG: rec:RHECIAT_CH0001460 probable transcriptional regulator protein, CRP/FNR family; Crp/Fnr family transcriptional regulator 1132305..1133057 Rhizobium leguminosarum bv. trifolii WSM1325 8012270 YP_002974988.1 CDS Rleg_1154 NC_012850.1 1133266 1133751 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ret:RHE_CH01393 two-component response regulator protein; response regulator receiver protein 1133266..1133751 Rhizobium leguminosarum bv. trifolii WSM1325 8012271 YP_002974989.1 CDS recO NC_012850.1 1133873 1134643 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1133873..1134643 Rhizobium leguminosarum bv. trifolii WSM1325 8012272 YP_002974990.1 CDS Rleg_1156 NC_012850.1 1134746 1135741 D PFAM: aldo/keto reductase; KEGG: ret:RHE_CH01395 oxidoreductase protein; aldo/keto reductase 1134746..1135741 Rhizobium leguminosarum bv. trifolii WSM1325 8012273 YP_002974991.1 CDS Rleg_1157 NC_012850.1 1135809 1136666 R PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: rec:RHECIAT_CH0001464 molybdenum cofactor sulfurase protein; MOSC domain-containing protein complement(1135809..1136666) Rhizobium leguminosarum bv. trifolii WSM1325 8012274 YP_002974992.1 CDS Rleg_1158 NC_012850.1 1136676 1137320 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: ret:RHE_CH01397 metal-dependent phosphohydrolase protein; metal dependent phosphohydrolase complement(1136676..1137320) Rhizobium leguminosarum bv. trifolii WSM1325 8012275 YP_002974993.1 CDS Rleg_1159 NC_012850.1 1137472 1139373 R KEGG: rec:RHECIAT_CH0001466 signal-transducer protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1137472..1139373) Rhizobium leguminosarum bv. trifolii WSM1325 8015529 YP_002974994.1 CDS Rleg_1160 NC_012850.1 1139813 1140154 D KEGG: ret:RHE_CH01399 hypothetical protein; hypothetical protein 1139813..1140154 Rhizobium leguminosarum bv. trifolii WSM1325 8012276 YP_002974995.1 CDS Rleg_1161 NC_012850.1 1140293 1140808 D PFAM: superoxide dismutase copper/zinc binding; KEGG: rec:RHECIAT_CH0001468 superoxide dismutase protein; copper/zinc binding superoxide dismutase 1140293..1140808 Rhizobium leguminosarum bv. trifolii WSM1325 8012277 YP_002974996.1 CDS Rleg_1162 NC_012850.1 1140911 1141795 R PFAM: MscS Mechanosensitive ion channel; KEGG: rec:RHECIAT_CH0001469 mechanosensitive ion channel protein; mechanosensitive ion channel protein MscS complement(1140911..1141795) Rhizobium leguminosarum bv. trifolii WSM1325 8012278 YP_002974997.1 CDS Rleg_1163 NC_012850.1 1141854 1142384 R KEGG: ret:RHE_CH01402 tyrosine phosphatase protein; tyrosine phosphatase protein complement(1141854..1142384) Rhizobium leguminosarum bv. trifolii WSM1325 8012279 YP_002974998.1 CDS Rleg_1164 NC_012850.1 1142381 1142989 R KEGG: rec:RHECIAT_CH0001471 hydrolase protein; hydrolase protein complement(1142381..1142989) Rhizobium leguminosarum bv. trifolii WSM1325 8012280 YP_002974999.1 CDS Rleg_1165 NC_012850.1 1142986 1143840 R TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rec:RHECIAT_CH0001472 aminomethyltransferase (glycine cleavage) protein; folate-binding protein YgfZ complement(1142986..1143840) Rhizobium leguminosarum bv. trifolii WSM1325 8012281 YP_002975000.1 CDS Rleg_1166 NC_012850.1 1143938 1144690 R KEGG: ret:RHE_CH01405 hypothetical protein; hypothetical protein complement(1143938..1144690) Rhizobium leguminosarum bv. trifolii WSM1325 8012282 YP_002975001.1 CDS Rleg_1167 NC_012850.1 1144709 1144966 R KEGG: rec:RHECIAT_CH0001474 hypothetical protein; hypothetical protein complement(1144709..1144966) Rhizobium leguminosarum bv. trifolii WSM1325 8012283 YP_002975002.1 CDS Rleg_1168 NC_012850.1 1145070 1145492 R KEGG: rec:RHECIAT_CH0001475 hypothetical protein; hypothetical protein complement(1145070..1145492) Rhizobium leguminosarum bv. trifolii WSM1325 8012284 YP_002975003.1 CDS Rleg_1169 NC_012850.1 1145551 1145967 R PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH01407 ADP-ribose phosphorylase; NUDIX hydrolase complement(1145551..1145967) Rhizobium leguminosarum bv. trifolii WSM1325 8012285 YP_002975004.1 CDS Rleg_1170 NC_012850.1 1146039 1146359 D PFAM: protein of unknown function UPF0060; KEGG: rec:RHECIAT_CH0001477 hypothetical protein; hypothetical protein 1146039..1146359 Rhizobium leguminosarum bv. trifolii WSM1325 8012286 YP_002975005.1 CDS Rleg_1171 NC_012850.1 1146401 1147165 D PFAM: protein of unknown function DUF159; KEGG: ret:RHE_CH01409 hypothetical protein; hypothetical protein 1146401..1147165 Rhizobium leguminosarum bv. trifolii WSM1325 8012287 YP_002975006.1 CDS Rleg_1172 NC_012850.1 1147389 1147535 R KEGG: atc:AGR_C_1959 hypothetical protein; hypothetical protein complement(1147389..1147535) Rhizobium leguminosarum bv. trifolii WSM1325 8015530 YP_002975007.1 CDS Rleg_1173 NC_012850.1 1147846 1148691 R KEGG: rec:RHECIAT_CH0001479 exopolysaccharide production CDP-diacylglycerol-serine O-phosphatidyltransferase protein; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(1147846..1148691) Rhizobium leguminosarum bv. trifolii WSM1325 8012288 YP_002975008.1 CDS Rleg_1174 NC_012850.1 1148771 1149469 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(1148771..1149469) Rhizobium leguminosarum bv. trifolii WSM1325 8015531 YP_002975009.1 CDS Rleg_1175 NC_012850.1 1149603 1151480 R PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001481 ABC transporter, ATP-binding protein; ABC transporter complement(1149603..1151480) Rhizobium leguminosarum bv. trifolii WSM1325 8012289 YP_002975010.1 CDS Rleg_1176 NC_012850.1 1151693 1153723 R PFAM: peptidoglycan-binding LysM; KEGG: ret:RHE_CH01416 peptidoglycan binding protein; peptidoglycan-binding LysM complement(1151693..1153723) Rhizobium leguminosarum bv. trifolii WSM1325 8012290 YP_002975011.1 CDS Rleg_1177 NC_012850.1 1153879 1154502 D PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0001483 hypothetical protein; hypothetical protein 1153879..1154502 Rhizobium leguminosarum bv. trifolii WSM1325 8015532 YP_002975012.1 CDS Rleg_1178 NC_012850.1 1154618 1155532 R TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0001488 permease protein; RarD protein, DMT superfamily transporter complement(1154618..1155532) Rhizobium leguminosarum bv. trifolii WSM1325 8012291 YP_002975013.1 CDS Rleg_1179 NC_012850.1 1155751 1157364 R TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; KEGG: ret:RHE_CH01419 alpha-isopropylmalate/homocitrate synthase family transferase; alpha-isopropylmalate/homocitrate synthase family transferase complement(1155751..1157364) Rhizobium leguminosarum bv. trifolii WSM1325 8012292 YP_002975014.1 CDS Rleg_1180 NC_012850.1 1157547 1158509 R KEGG: rec:RHECIAT_CH0001490 proline iminopeptidase protein; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase complement(1157547..1158509) Rhizobium leguminosarum bv. trifolii WSM1325 8012293 YP_002975015.1 CDS Rleg_1181 NC_012850.1 1158506 1158982 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH01421 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(1158506..1158982) Rhizobium leguminosarum bv. trifolii WSM1325 8012294 YP_002975016.1 CDS Rleg_1182 NC_012850.1 1158979 1159467 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rec:RHECIAT_CH0001492 glutathione-dependent formaldehyde-activating protein; glutathione-dependent formaldehyde-activating protein complement(1158979..1159467) Rhizobium leguminosarum bv. trifolii WSM1325 8012295 YP_002975017.1 CDS Rleg_1183 NC_012850.1 1159464 1159940 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH01423 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(1159464..1159940) Rhizobium leguminosarum bv. trifolii WSM1325 8012296 YP_002975018.1 CDS cysS NC_012850.1 1159937 1161328 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(1159937..1161328) Rhizobium leguminosarum bv. trifolii WSM1325 8012297 YP_002975019.1 CDS Rleg_1185 NC_012850.1 1161683 1162432 D PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: ret:RHE_CH01426 glycosyl hydrolase, lysozyme protein; glycoside hydrolase 1161683..1162432 Rhizobium leguminosarum bv. trifolii WSM1325 8012298 YP_002975020.1 CDS Rleg_1186 NC_012850.1 1162444 1163184 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0001498 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(1162444..1163184) Rhizobium leguminosarum bv. trifolii WSM1325 8015533 YP_002975021.1 CDS Rleg_1187 NC_012850.1 1163263 1164753 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1163263..1164753) Rhizobium leguminosarum bv. trifolii WSM1325 8012299 YP_002975022.1 CDS Rleg_1188 NC_012850.1 1164902 1165528 R PFAM: Colicin V production protein; KEGG: ret:RHE_CH01429 colicin V production protein; colicin V production protein complement(1164902..1165528) Rhizobium leguminosarum bv. trifolii WSM1325 8012300 YP_002975023.1 CDS Rleg_1189 NC_012850.1 1165618 1167018 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1165618..1167018) Rhizobium leguminosarum bv. trifolii WSM1325 8015534 YP_002975024.1 CDS Rleg_1190 NC_012850.1 1167030 1167143 R hypothetical protein complement(1167030..1167143) Rhizobium leguminosarum bv. trifolii WSM1325 8012301 YP_002975025.1 CDS Rleg_1191 NC_012850.1 1167179 1167814 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ret:RHE_CH01431 LysE family amino acid efflux protein; lysine exporter protein LysE/YggA 1167179..1167814 Rhizobium leguminosarum bv. trifolii WSM1325 8012302 YP_002975026.1 CDS Rleg_1192 NC_012850.1 1167824 1168993 R KEGG: alr; alanine racemase ; K01775 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase; alanine racemase complement(1167824..1168993) Rhizobium leguminosarum bv. trifolii WSM1325 8015535 YP_002975027.1 CDS Rleg_1193 NC_012850.1 1169083 1170579 R unwinds double stranded DNA; replicative DNA helicase complement(1169083..1170579) Rhizobium leguminosarum bv. trifolii WSM1325 8012303 YP_002975028.1 CDS rplI NC_012850.1 1170952 1171530 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(1170952..1171530) Rhizobium leguminosarum bv. trifolii WSM1325 8012304 YP_002975029.1 CDS Rleg_1195 NC_012850.1 1171553 1172539 R KEGG: rec:RHECIAT_CH0001506 hypothetical protein; hypothetical protein complement(1171553..1172539) Rhizobium leguminosarum bv. trifolii WSM1325 8012305 YP_002975030.1 CDS rpsR NC_012850.1 1172696 1172944 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(1172696..1172944) Rhizobium leguminosarum bv. trifolii WSM1325 8012306 YP_002975031.1 CDS rpsF NC_012850.1 1172959 1173426 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(1172959..1173426) Rhizobium leguminosarum bv. trifolii WSM1325 8015536 YP_002975032.1 CDS Rleg_1198 NC_012850.1 1173742 1174785 R PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0001509 oxidoreductase protein; aldo/keto reductase complement(1173742..1174785) Rhizobium leguminosarum bv. trifolii WSM1325 8012307 YP_002975033.1 CDS Rleg_1199 NC_012850.1 1175001 1175945 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: ret:RHE_CH01442 [acyl-carrier protein] S-malonyltransferase protein; malonyl CoA-acyl carrier protein transacylase 1175001..1175945 Rhizobium leguminosarum bv. trifolii WSM1325 8012308 YP_002975034.1 CDS Rleg_1200 NC_012850.1 1175997 1176734 D catalyzes the formation of 3-hydroxyacyl-ACP from 3-keto-acyl-ACP; in the rhizobia this protein interacts with NodF to allow for the synthesis of highly polyunsaturated fatty acids necessary for nodulation; 3-ketoacyl-ACP reductase 1175997..1176734 Rhizobium leguminosarum bv. trifolii WSM1325 8015537 YP_002975035.1 CDS acpP NC_012850.1 1177021 1177257 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1177021..1177257 Rhizobium leguminosarum bv. trifolii WSM1325 8012309 YP_002975036.1 CDS Rleg_1202 NC_012850.1 1177351 1178613 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1177351..1178613 Rhizobium leguminosarum bv. trifolii WSM1325 8012310 YP_002975037.1 CDS Rleg_1203 NC_012850.1 1178797 1180014 D PFAM: aminodeoxychorismate lyase; KEGG: rec:RHECIAT_CH0001514 aminodeoxychorismate lyase protein; aminodeoxychorismate lyase 1178797..1180014 Rhizobium leguminosarum bv. trifolii WSM1325 8012311 YP_002975038.1 CDS Rleg_1204 NC_012850.1 1180033 1180920 D PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: ret:RHE_CH01447 hypothetical protein; hypothetical protein 1180033..1180920 Rhizobium leguminosarum bv. trifolii WSM1325 8012312 YP_002975039.1 CDS gmk NC_012850.1 1180924 1181586 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1180924..1181586 Rhizobium leguminosarum bv. trifolii WSM1325 8012313 YP_002975040.1 CDS ksgA NC_012850.1 1181631 1182458 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(1181631..1182458) Rhizobium leguminosarum bv. trifolii WSM1325 8012314 YP_002975041.1 CDS pdxA NC_012850.1 1182458 1183486 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(1182458..1183486) Rhizobium leguminosarum bv. trifolii WSM1325 8012315 YP_002975042.1 CDS Rleg_1208 NC_012850.1 1183493 1184437 R KEGG: rec:RHECIAT_CH0001519 probable peptidyl-prolyl cis-trans isomerase protein; peptidyl-prolyl cis-trans isomerase protein complement(1183493..1184437) Rhizobium leguminosarum bv. trifolii WSM1325 8012316 YP_002975043.1 CDS Rleg_1210 NC_012850.1 1184622 1186952 R PFAM: organic solvent tolerance protein; KEGG: ret:RHE_CH01452 organic solvent tolerance protein OstA; organic solvent tolerance protein complement(1184622..1186952) Rhizobium leguminosarum bv. trifolii WSM1325 8012318 YP_002975044.1 CDS Rleg_1211 NC_012850.1 1186952 1188040 R PFAM: permease YjgP/YjgQ family protein; KEGG: ret:RHE_CH01453 permease protein; YjgP/YjgQ family permease complement(1186952..1188040) Rhizobium leguminosarum bv. trifolii WSM1325 8012319 YP_002975045.1 CDS Rleg_1212 NC_012850.1 1188037 1189218 R PFAM: permease YjgP/YjgQ family protein; KEGG: ret:RHE_CH01454 permease protein; YjgP/YjgQ family permease complement(1188037..1189218) Rhizobium leguminosarum bv. trifolii WSM1325 8015538 YP_002975046.1 CDS Rleg_1213 NC_012850.1 1189319 1190092 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ret:RHE_CH01455 phosphatase protein; PA-phosphatase like phosphoesterase complement(1189319..1190092) Rhizobium leguminosarum bv. trifolii WSM1325 8012320 YP_002975047.1 CDS Rleg_1214 NC_012850.1 1190237 1191727 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1190237..1191727 Rhizobium leguminosarum bv. trifolii WSM1325 8012321 YP_002975048.1 CDS Rleg_1215 NC_012850.1 1191727 1192176 D binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 1191727..1192176 Rhizobium leguminosarum bv. trifolii WSM1325 8012322 YP_002975049.1 CDS Rleg_1216 NC_012850.1 1192292 1192795 R hypothetical protein complement(1192292..1192795) Rhizobium leguminosarum bv. trifolii WSM1325 8012323 YP_002975050.1 CDS Rleg_1217 NC_012850.1 1192868 1193794 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0001526 D-galactose-1-dehydrogenase protein; galactose 1-dehydrogenase complement(1192868..1193794) Rhizobium leguminosarum bv. trifolii WSM1325 8012324 YP_002975051.1 CDS Rleg_1218 NC_012850.1 1193881 1195923 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: rec:RHECIAT_CH0001527 probable prolyl oligopeptidase protein; prolyl oligopeptidase complement(1193881..1195923) Rhizobium leguminosarum bv. trifolii WSM1325 8012325 YP_002975052.1 CDS Rleg_1219 NC_012850.1 1195992 1196837 R PFAM: polysaccharide deacetylase; KEGG: rec:RHECIAT_CH0001535 polysaccharide deacetylase protein; polysaccharide deacetylase complement(1195992..1196837) Rhizobium leguminosarum bv. trifolii WSM1325 8012326 YP_002975053.1 CDS Rleg_1220 NC_012850.1 1197079 1198962 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001536 ABC transporter, ATP-binding protein; ABC transporter complement(1197079..1198962) Rhizobium leguminosarum bv. trifolii WSM1325 8012327 YP_002975054.1 CDS Rleg_1221 NC_012850.1 1199065 1200114 R KEGG: rec:RHECIAT_CH0001537 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1199065..1200114) Rhizobium leguminosarum bv. trifolii WSM1325 8012328 YP_002975055.1 CDS Rleg_1222 NC_012850.1 1200258 1200767 R PFAM: DinB family protein; KEGG: ret:RHE_CH01470 hypothetical protein; DinB family protein complement(1200258..1200767) Rhizobium leguminosarum bv. trifolii WSM1325 8012329 YP_002975056.1 CDS Rleg_1223 NC_012850.1 1200907 1201596 D PFAM: glutathione S-transferase domain; KEGG: rec:RHECIAT_CH0001539 beta-aryl ether cleaving enzyme, lignin degradation protein; glutathione S-transferase domain protein 1200907..1201596 Rhizobium leguminosarum bv. trifolii WSM1325 8012330 YP_002975057.1 CDS ndk NC_012850.1 1201678 1202100 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1201678..1202100 Rhizobium leguminosarum bv. trifolii WSM1325 8012331 YP_002975058.1 CDS Rleg_1225 NC_012850.1 1202185 1202688 R KEGG: ret:RHE_CH01473 hypothetical protein; hypothetical protein complement(1202185..1202688) Rhizobium leguminosarum bv. trifolii WSM1325 8012332 YP_002975059.1 CDS Rleg_1226 NC_012850.1 1202685 1203230 R PFAM: protein of unknown function DUF1470; KEGG: rec:RHECIAT_CH0001542 hypothetical protein; hypothetical protein complement(1202685..1203230) Rhizobium leguminosarum bv. trifolii WSM1325 8012333 YP_002975060.1 CDS Rleg_1227 NC_012850.1 1203297 1204193 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0001543 probable ABC transporter, permease protein; inner-membrane translocator 1203297..1204193 Rhizobium leguminosarum bv. trifolii WSM1325 8012334 YP_002975061.1 CDS Rleg_1228 NC_012850.1 1204194 1204685 R PFAM: molybdopterin biosynthesis MoaE protein; KEGG: rec:RHECIAT_CH0001544 molybdopterin converting factor protein, subunit 2; molybdopterin biosynthesis protein MoaE complement(1204194..1204685) Rhizobium leguminosarum bv. trifolii WSM1325 8012335 YP_002975062.1 CDS Rleg_1230 NC_012850.1 1204902 1205156 R TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rec:RHECIAT_CH0001545 molybdopterin converting factor protein, subunit 1; molybdopterin converting factor subunit 1 complement(1204902..1205156) Rhizobium leguminosarum bv. trifolii WSM1325 8012337 YP_002975063.1 CDS Rleg_1231 NC_012850.1 1205153 1205743 R KEGG: rec:RHECIAT_CH0001546 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase protein; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(1205153..1205743) Rhizobium leguminosarum bv. trifolii WSM1325 8012338 YP_002975064.1 CDS uvrC NC_012850.1 1205959 1208001 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(1205959..1208001) Rhizobium leguminosarum bv. trifolii WSM1325 8012339 YP_002975065.1 CDS Rleg_1233 NC_012850.1 1207998 1208765 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH01480 short chain dehydrogenase; short chain dehydrogenase complement(1207998..1208765) Rhizobium leguminosarum bv. trifolii WSM1325 8012340 YP_002975066.1 CDS Rleg_1234 NC_012850.1 1209131 1209766 D PFAM: porin; OmpA domain protein transmembrane region-containing protein; KEGG: ret:RHE_CH01481 outer membrane protein; porin 1209131..1209766 Rhizobium leguminosarum bv. trifolii WSM1325 8012341 YP_002975067.1 CDS Rleg_1236 NC_012850.1 1210611 1211480 R PFAM: protein of unknown function DUF519; KEGG: rec:RHECIAT_CH0001551 hypothetical protein; hypothetical protein complement(1210611..1211480) Rhizobium leguminosarum bv. trifolii WSM1325 8012342 YP_002975068.1 CDS Rleg_1237 NC_012850.1 1211497 1213701 D PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: ret:RHE_CH01484 anaerobic dehydrogenase protein; nitrate reductase 1211497..1213701 Rhizobium leguminosarum bv. trifolii WSM1325 8012343 YP_002975069.1 CDS Rleg_1238 NC_012850.1 1213698 1214291 D PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0001553 ADP-ribose pyrophosphatase protein; NUDIX hydrolase 1213698..1214291 Rhizobium leguminosarum bv. trifolii WSM1325 8015540 YP_002975070.1 CDS Rleg_1239 NC_012850.1 1214436 1215605 D TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; amidohydrolase; KEGG: rec:RHECIAT_CH0001554 phosphonate metabolism protein; phosphonate metabolism protein PhnM 1214436..1215605 Rhizobium leguminosarum bv. trifolii WSM1325 8012344 YP_002975071.1 CDS purN NC_012850.1 1215602 1216273 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(1215602..1216273) Rhizobium leguminosarum bv. trifolii WSM1325 8012345 YP_002975072.1 CDS Rleg_1241 NC_012850.1 1216270 1217343 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(1216270..1217343) Rhizobium leguminosarum bv. trifolii WSM1325 8012346 YP_002975073.1 CDS Rleg_1242 NC_012850.1 1217590 1218714 D PFAM: protein of unknown function UPF0118; KEGG: rec:RHECIAT_CH0001557 permease protein; hypothetical protein 1217590..1218714 Rhizobium leguminosarum bv. trifolii WSM1325 8012347 YP_002975074.1 CDS Rleg_1243 NC_012850.1 1218707 1219420 D KEGG: rec:RHECIAT_CH0001558 hypothetical protein; hypothetical protein 1218707..1219420 Rhizobium leguminosarum bv. trifolii WSM1325 8012348 YP_002975075.1 CDS Rleg_1244 NC_012850.1 1219486 1221690 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1219486..1221690 Rhizobium leguminosarum bv. trifolii WSM1325 8012349 YP_002975076.1 CDS Rleg_1245 NC_012850.1 1221703 1223223 D PFAM: Ppx/GppA phosphatase; KEGG: rec:RHECIAT_CH0001560 exopolyphosphatase protein; Ppx/GppA phosphatase 1221703..1223223 Rhizobium leguminosarum bv. trifolii WSM1325 8012350 YP_002975077.1 CDS Rleg_1246 NC_012850.1 1223316 1224524 R PFAM: Integrase catalytic region; KEGG: hne:HNE_3190 ISHne2, transposase; integrase catalytic subunit complement(1223316..1224524) Rhizobium leguminosarum bv. trifolii WSM1325 8012351 YP_002975078.1 CDS Rleg_1247 NC_012850.1 1224840 1226198 R KEGG: rec:RHECIAT_CH0001561 hypothetical protein; hypothetical protein complement(1224840..1226198) Rhizobium leguminosarum bv. trifolii WSM1325 8015541 YP_002975079.1 CDS Rleg_1248 NC_012850.1 1226304 1227365 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH01494 adenylate cyclase protein; adenylate/guanylate cyclase complement(1226304..1227365) Rhizobium leguminosarum bv. trifolii WSM1325 8012352 YP_002975080.1 CDS Rleg_1249 NC_012850.1 1227543 1228688 R KEGG: rec:RHECIAT_CH0001563 ribonuclease III protein; TIGRFAM: ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; ribonuclease D complement(1227543..1228688) Rhizobium leguminosarum bv. trifolii WSM1325 8012353 YP_002975081.1 CDS Rleg_1250 NC_012850.1 1228853 1230244 R PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: rec:RHECIAT_CH0001564 probable metallo-oxidoreductase protein; multicopper oxidase type 3 complement(1228853..1230244) Rhizobium leguminosarum bv. trifolii WSM1325 8015542 YP_002975082.1 CDS aspS NC_012850.1 1230498 1232288 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1230498..1232288 Rhizobium leguminosarum bv. trifolii WSM1325 8012354 YP_002975083.1 CDS Rleg_1252 NC_012850.1 1232352 1233521 R PFAM: beta-lactamase; KEGG: beta-lactamase class C protein; beta-lactamase complement(1232352..1233521) Rhizobium leguminosarum bv. trifolii WSM1325 8012355 YP_002975084.1 CDS Rleg_1253 NC_012850.1 1233597 1234229 D PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein; TetR family transcriptional regulator 1233597..1234229 Rhizobium leguminosarum bv. trifolii WSM1325 8012356 YP_002975085.1 CDS Rleg_1254 NC_012850.1 1234288 1235475 R KEGG: ret:RHE_CH01498 hypothetical protein; hypothetical protein complement(1234288..1235475) Rhizobium leguminosarum bv. trifolii WSM1325 8012357 YP_002975086.1 CDS Rleg_1255 NC_012850.1 1235711 1237966 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1235711..1237966 Rhizobium leguminosarum bv. trifolii WSM1325 8012358 YP_002975087.1 CDS Rleg_1256 NC_012850.1 1238225 1238683 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rec:RHECIAT_CH0001568 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 1238225..1238683 Rhizobium leguminosarum bv. trifolii WSM1325 8012359 YP_002975088.1 CDS Rleg_1257 NC_012850.1 1238673 1239065 R TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: rec:RHECIAT_CH0001569 death-on-curing family (prophage maintenance system killer) protein; death-on-curing family protein complement(1238673..1239065) Rhizobium leguminosarum bv. trifolii WSM1325 8012360 YP_002975089.1 CDS Rleg_1258 NC_012850.1 1239062 1239283 R TIGRFAM: addiction module antidote; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: rec:RHECIAT_CH0001570 transcriptional regulator protein; MazE family transcriptional regulator complement(1239062..1239283) Rhizobium leguminosarum bv. trifolii WSM1325 8012361 YP_002975090.1 CDS Rleg_1259 NC_012850.1 1239343 1240230 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH01501 permease protein; hypothetical protein complement(1239343..1240230) Rhizobium leguminosarum bv. trifolii WSM1325 8012362 YP_002975091.1 CDS Rleg_1260 NC_012850.1 1240231 1241007 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1240231..1241007) Rhizobium leguminosarum bv. trifolii WSM1325 8012363 YP_002975092.1 CDS Rleg_1261 NC_012850.1 1241214 1241672 R PFAM: RDD domain containing protein; KEGG: ret:RHE_CH01503 hypothetical protein; RDD domain-containing protein complement(1241214..1241672) Rhizobium leguminosarum bv. trifolii WSM1325 8012364 YP_002975093.1 CDS Rleg_1262 NC_012850.1 1241772 1242785 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1241772..1242785) Rhizobium leguminosarum bv. trifolii WSM1325 8012365 YP_002975094.1 CDS Rleg_1263 NC_012850.1 1242988 1243452 D KEGG: ret:RHE_CH01505 hypothetical protein; hypothetical protein 1242988..1243452 Rhizobium leguminosarum bv. trifolii WSM1325 8012366 YP_002975095.1 CDS Rleg_1264 NC_012850.1 1243581 1244096 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0001576 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator 1243581..1244096 Rhizobium leguminosarum bv. trifolii WSM1325 8012367 YP_002975096.1 CDS Rleg_1265 NC_012850.1 1244542 1245843 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding domain 1 protein; KEGG: ret:RHE_CH01507 peptidoglycan binding protein (involved in cell wall degradation); ErfK/YbiS/YcfS/YnhG family protein 1244542..1245843 Rhizobium leguminosarum bv. trifolii WSM1325 8012368 YP_002975097.1 CDS glyA NC_012850.1 1246060 1247358 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1246060..1247358 Rhizobium leguminosarum bv. trifolii WSM1325 8012369 YP_002975098.1 CDS nrdR NC_012850.1 1247368 1247844 D PFAM: ATP-cone domain protein; KEGG: rec:RHECIAT_CH0001579 hypothetical protein; NrdR family transcriptional regulator 1247368..1247844 Rhizobium leguminosarum bv. trifolii WSM1325 8012370 YP_002975099.1 CDS Rleg_1268 NC_012850.1 1247848 1249164 D TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_CH0001580 5-amino-6-(5-phosphoribosylamino)uracil reductase protein; riboflavin biosynthesis protein RibD 1247848..1249164 Rhizobium leguminosarum bv. trifolii WSM1325 8012371 YP_002975100.1 CDS Rleg_1269 NC_012850.1 1249164 1249775 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1249164..1249775 Rhizobium leguminosarum bv. trifolii WSM1325 8012372 YP_002975101.1 CDS Rleg_1270 NC_012850.1 1249898 1250767 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: rec:RHECIAT_CH0001582 glucose-1-phosphate thymidylyltransferase protein; glucose-1-phosphate thymidylyltransferase complement(1249898..1250767) Rhizobium leguminosarum bv. trifolii WSM1325 8012373 YP_002975102.1 CDS Rleg_1271 NC_012850.1 1250778 1251665 R KEGG: rec:RHECIAT_CH0001583 dTDP-4-dehydrorhamnose reductase protein; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase complement(1250778..1251665) Rhizobium leguminosarum bv. trifolii WSM1325 8012374 YP_002975103.1 CDS Rleg_1272 NC_012850.1 1251669 1252724 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0001584 dTDP-glucose-4,6-dehydratase protein; dTDP-glucose 4,6-dehydratase complement(1251669..1252724) Rhizobium leguminosarum bv. trifolii WSM1325 8012375 YP_002975104.1 CDS Rleg_1273 NC_012850.1 1252731 1253309 R KEGG: rec:RHECIAT_CH0001585 dTDP-4-dehydrorhamnose 3,5-epimerase protein; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1252731..1253309) Rhizobium leguminosarum bv. trifolii WSM1325 8012376 YP_002975105.1 CDS Rleg_1274 NC_012850.1 1253333 1255309 R KEGG: rec:RHECIAT_CH0001586 hypothetical protein; hypothetical protein complement(1253333..1255309) Rhizobium leguminosarum bv. trifolii WSM1325 8015543 YP_002975106.1 CDS Rleg_1275 NC_012850.1 1255560 1256366 R hypothetical protein complement(1255560..1256366) Rhizobium leguminosarum bv. trifolii WSM1325 8012377 YP_002975107.1 CDS Rleg_1276 NC_012850.1 1256683 1257198 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH01522 acetyltransferase protein; N-acetyltransferase GCN5 complement(1256683..1257198) Rhizobium leguminosarum bv. trifolii WSM1325 8015544 YP_002975108.1 CDS Rleg_1277 NC_012850.1 1257209 1257712 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH01523 hypothetical protein; cupin complement(1257209..1257712) Rhizobium leguminosarum bv. trifolii WSM1325 8012378 YP_002975109.1 CDS Rleg_1278 NC_012850.1 1257928 1258287 R KEGG: rec:RHECIAT_CH0001594 hypothetical protein; hypothetical protein complement(1257928..1258287) Rhizobium leguminosarum bv. trifolii WSM1325 8012379 YP_002975110.1 CDS ribH NC_012850.1 1258634 1259089 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1258634..1259089 Rhizobium leguminosarum bv. trifolii WSM1325 8012380 YP_002975111.1 CDS nusB NC_012850.1 1259093 1259575 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1259093..1259575 Rhizobium leguminosarum bv. trifolii WSM1325 8012381 YP_002975112.1 CDS hppA NC_012850.1 1259774 1261912 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1259774..1261912 Rhizobium leguminosarum bv. trifolii WSM1325 8012382 YP_002975113.1 CDS Rleg_1282 NC_012850.1 1262009 1262542 R PFAM: SmpA/OmlA domain protein; KEGG: rec:RHECIAT_CH0001599 outer membrane protein; SmpA/OmlA domain-containing protein complement(1262009..1262542) Rhizobium leguminosarum bv. trifolii WSM1325 8012383 YP_002975114.1 CDS Rleg_1283 NC_012850.1 1262789 1263322 D PFAM: Ubiquinol-cytochrome C chaperone; KEGG: rec:RHECIAT_CH0001600 hypothetical protein; ubiquinol-cytochrome C chaperone 1262789..1263322 Rhizobium leguminosarum bv. trifolii WSM1325 8012384 YP_002975115.1 CDS Rleg_1284 NC_012850.1 1263334 1263888 D PFAM: protein of unknown function DUF177; KEGG: ret:RHE_CH01530 hypothetical protein; hypothetical protein 1263334..1263888 Rhizobium leguminosarum bv. trifolii WSM1325 8012385 YP_002975116.1 CDS Rleg_1285 NC_012850.1 1263987 1265033 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1263987..1265033 Rhizobium leguminosarum bv. trifolii WSM1325 8012386 YP_002975117.1 CDS Rleg_1286 NC_012850.1 1265054 1266025 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1265054..1266025 Rhizobium leguminosarum bv. trifolii WSM1325 8012387 YP_002975118.1 CDS ihfA NC_012850.1 1266131 1266469 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1266131..1266469 Rhizobium leguminosarum bv. trifolii WSM1325 8012388 YP_002975119.1 CDS Rleg_1288 NC_012850.1 1266621 1267160 D PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rec:RHECIAT_CH0001605 probable transcriptional regulator protein, MerR family; MerR family transcriptional regulator 1266621..1267160 Rhizobium leguminosarum bv. trifolii WSM1325 8012389 YP_002975120.1 CDS Rleg_1289 NC_012850.1 1267170 1267529 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ret:RHE_CH01535 two-component response regulator protein; response regulator receiver protein complement(1267170..1267529) Rhizobium leguminosarum bv. trifolii WSM1325 8012390 YP_002975121.1 CDS Rleg_1290 NC_012850.1 1267816 1269537 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: rec:RHECIAT_CH0001607 two-component sensor histidine kinase protein; histidine kinase 1267816..1269537 Rhizobium leguminosarum bv. trifolii WSM1325 8012391 YP_002975122.1 CDS Rleg_1291 NC_012850.1 1269577 1269891 R PFAM: protein of unknown function DUF1236; KEGG: rec:RHECIAT_CH0001608 hypothetical protein; hypothetical protein complement(1269577..1269891) Rhizobium leguminosarum bv. trifolii WSM1325 8012392 YP_002975123.1 CDS Rleg_1292 NC_012850.1 1270216 1271196 D KEGG: rec:RHECIAT_CH0001609 hypothetical protein; hypothetical protein 1270216..1271196 Rhizobium leguminosarum bv. trifolii WSM1325 8012393 YP_002975124.1 CDS Rleg_1293 NC_012850.1 1271255 1273447 D TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: rec:RHECIAT_CH0001610 cellulose synthase protein; cellulose synthase catalytic subunit 1271255..1273447 Rhizobium leguminosarum bv. trifolii WSM1325 8012394 YP_002975125.1 CDS Rleg_1294 NC_012850.1 1273444 1275885 D PFAM: cellulose synthase subunit B; KEGG: ret:RHE_CH01543 cellulose synthase protein; cellulose synthase subunit B 1273444..1275885 Rhizobium leguminosarum bv. trifolii WSM1325 8015545 YP_002975126.1 CDS Rleg_1295 NC_012850.1 1275882 1276928 D PFAM: glycoside hydrolase family 8; KEGG: ret:RHE_CH01544 endoglucanase (glycoside hydrolase) protein; cellulase 1275882..1276928 Rhizobium leguminosarum bv. trifolii WSM1325 8012395 YP_002975127.1 CDS Rleg_1296 NC_012850.1 1276925 1279300 D KEGG: ret:RHE_CH01545 hypothetical protein; hypothetical protein 1276925..1279300 Rhizobium leguminosarum bv. trifolii WSM1325 8012396 YP_002975128.1 CDS Rleg_1297 NC_012850.1 1279414 1280082 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0001614 (DL)-glycerol-3-phosphatase protein; HAD-superfamily hydrolase 1279414..1280082 Rhizobium leguminosarum bv. trifolii WSM1325 8015546 YP_002975129.1 CDS Rleg_1298 NC_012850.1 1280443 1281075 R PFAM: methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; methyltransferase type 12; KEGG: rec:RHECIAT_CH0001616 probable 3-demethylubiquinone-9 3-methyltransferase protein; type 11 methyltransferase complement(1280443..1281075) Rhizobium leguminosarum bv. trifolii WSM1325 8012398 YP_002975130.1 CDS Rleg_1299 NC_012850.1 1281621 1281830 D KEGG: rec:RHECIAT_CH0001617 hypothetical protein; hypothetical protein 1281621..1281830 Rhizobium leguminosarum bv. trifolii WSM1325 8012399 YP_002975131.1 CDS Rleg_1300 NC_012850.1 1281837 1282082 R PFAM: protein of unknown function DUF982; KEGG: mes:Meso_0848 hypothetical protein; hypothetical protein complement(1281837..1282082) Rhizobium leguminosarum bv. trifolii WSM1325 8015547 YP_002975132.1 CDS Rleg_1301 NC_012850.1 1282268 1282480 D KEGG: ret:RHE_CH01550 hypothetical protein; hypothetical protein 1282268..1282480 Rhizobium leguminosarum bv. trifolii WSM1325 8012400 YP_002975133.1 CDS Rleg_1302 NC_012850.1 1282484 1282633 R KEGG: hypothetical protein; hypothetical protein complement(1282484..1282633) Rhizobium leguminosarum bv. trifolii WSM1325 8012401 YP_002975134.1 CDS Rleg_1303 NC_012850.1 1282709 1283002 R KEGG: rec:RHECIAT_CH0001620 hypothetical protein; hypothetical protein complement(1282709..1283002) Rhizobium leguminosarum bv. trifolii WSM1325 8012402 YP_002975135.1 CDS Rleg_1304 NC_012850.1 1283076 1284257 R PFAM: ROK family protein; KEGG: ret:RHE_CH01552 ROK family transcriptional regulator; ROK family protein complement(1283076..1284257) Rhizobium leguminosarum bv. trifolii WSM1325 8012403 YP_002975136.1 CDS Rleg_1305 NC_012850.1 1284808 1285422 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0001623 probable acetyltransferase protein; N-acetyltransferase GCN5 complement(1284808..1285422) Rhizobium leguminosarum bv. trifolii WSM1325 8012404 YP_002975137.1 CDS Rleg_1306 NC_012850.1 1285600 1286937 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0001624 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 1285600..1286937 Rhizobium leguminosarum bv. trifolii WSM1325 8012405 YP_002975138.1 CDS Rleg_1307 NC_012850.1 1287063 1287956 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0001625 sugar ABC transporter, permease protein; ABC transporter permease 1287063..1287956 Rhizobium leguminosarum bv. trifolii WSM1325 8012406 YP_002975139.1 CDS Rleg_1308 NC_012850.1 1287956 1288789 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH01557 sugar ABC transporter, permease protein; ABC transporter permease 1287956..1288789 Rhizobium leguminosarum bv. trifolii WSM1325 8012407 YP_002975140.1 CDS Rleg_1309 NC_012850.1 1288817 1290061 R KEGG: rec:RHECIAT_CH0001627 hypothetical conserved membrane protein; hypothetical protein complement(1288817..1290061) Rhizobium leguminosarum bv. trifolii WSM1325 8012408 YP_002975141.1 CDS Rleg_1310 NC_012850.1 1290058 1291620 R KEGG: rec:RHECIAT_CH0001628 probable glycosyltransferase protein; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate glucose phosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(1290058..1291620) Rhizobium leguminosarum bv. trifolii WSM1325 8012409 YP_002975142.1 CDS Rleg_1311 NC_012850.1 1291678 1292847 R PFAM: glycosyl transferase group 1; KEGG: rec:RHECIAT_CH0001629 probable glycosyltransferase protein; group 1 glycosyl transferase complement(1291678..1292847) Rhizobium leguminosarum bv. trifolii WSM1325 8012410 YP_002975143.1 CDS Rleg_1312 NC_012850.1 1292851 1293426 R PFAM: polysaccharide export protein; KEGG: ret:RHE_CH01561 polysaccharide export system protein; polysaccharide export protein complement(1292851..1293426) Rhizobium leguminosarum bv. trifolii WSM1325 8012411 YP_002975144.1 CDS Rleg_1313 NC_012850.1 1293616 1295796 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: rec:RHECIAT_CH0001631 non-specific protein-tyrosine kinase (lipopolysaccharide biosynthesis) protein; lipopolysaccharide biosynthesis protein 1293616..1295796 Rhizobium leguminosarum bv. trifolii WSM1325 8015548 YP_002975145.1 CDS Rleg_1314 NC_012850.1 1295801 1297042 R KEGG: rec:RHECIAT_CH0001632 hypothetical protein; hypothetical protein complement(1295801..1297042) Rhizobium leguminosarum bv. trifolii WSM1325 8012412 YP_002975146.1 CDS Rleg_1315 NC_012850.1 1297266 1297475 R KEGG: rec:RHECIAT_CH0001633 hypothetical protein; hypothetical protein complement(1297266..1297475) Rhizobium leguminosarum bv. trifolii WSM1325 8012413 YP_002975147.1 CDS Rleg_1316 NC_012850.1 1297590 1298693 D PFAM: cytochrome oxidase assembly; KEGG: rec:RHECIAT_CH0001634 probable cytochrome C oxidase protein; cytochrome oxidase assembly 1297590..1298693 Rhizobium leguminosarum bv. trifolii WSM1325 8012414 YP_002975148.1 CDS Rleg_1317 NC_012850.1 1298719 1299510 R PFAM: protein of unknown function DUF81; KEGG: rec:RHECIAT_CH0001635 hypothetical conserved membrane protein; hypothetical protein complement(1298719..1299510) Rhizobium leguminosarum bv. trifolii WSM1325 8012415 YP_002975149.1 CDS Rleg_1318 NC_012850.1 1299696 1300628 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(1299696..1300628) Rhizobium leguminosarum bv. trifolii WSM1325 8015549 YP_002975150.1 CDS Rleg_1319 NC_012850.1 1300689 1301651 R catalyzes the formation of putrescine from agmatine; agmatinase complement(1300689..1301651) Rhizobium leguminosarum bv. trifolii WSM1325 8012416 YP_002975151.1 CDS Rleg_1320 NC_012850.1 1301868 1303055 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH01569 florfenicol/chloramphenicol resistance transporter protein; Bcr/CflA subfamily drug resistance transporter complement(1301868..1303055) Rhizobium leguminosarum bv. trifolii WSM1325 8012417 YP_002975152.1 CDS rpsI NC_012850.1 1303363 1303830 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(1303363..1303830) Rhizobium leguminosarum bv. trifolii WSM1325 8015550 YP_002975153.1 CDS rplM NC_012850.1 1303832 1304296 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(1303832..1304296) Rhizobium leguminosarum bv. trifolii WSM1325 8012418 YP_002975154.1 CDS Rleg_1323 NC_012850.1 1304612 1305490 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0001640 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(1304612..1305490) Rhizobium leguminosarum bv. trifolii WSM1325 8012419 YP_002975155.1 CDS Rleg_1324 NC_012850.1 1305586 1305816 D KEGG: rec:RHECIAT_CH0001641 hypothetical protein; hypothetical protein 1305586..1305816 Rhizobium leguminosarum bv. trifolii WSM1325 8012420 YP_002975156.1 CDS Rleg_1325 NC_012850.1 1305913 1306746 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1305913..1306746 Rhizobium leguminosarum bv. trifolii WSM1325 8012421 YP_002975157.1 CDS Rleg_1326 NC_012850.1 1306747 1307583 R KEGG: rec:RHECIAT_CH0001643 permease protein; permease protein complement(1306747..1307583) Rhizobium leguminosarum bv. trifolii WSM1325 8012422 YP_002975158.1 CDS Rleg_1327 NC_012850.1 1308059 1308382 R KEGG: rec:RHECIAT_CH0001645 hypothetical protein; hypothetical protein complement(1308059..1308382) Rhizobium leguminosarum bv. trifolii WSM1325 8012423 YP_002975159.1 CDS Rleg_1328 NC_012850.1 1308525 1308953 D PFAM: CoA-binding domain protein; KEGG: ret:RHE_CH01576 hypothetical protein; CoA-binding protein 1308525..1308953 Rhizobium leguminosarum bv. trifolii WSM1325 8012424 YP_002975160.1 CDS Rleg_1329 NC_012850.1 1309071 1310354 D catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1309071..1310354 Rhizobium leguminosarum bv. trifolii WSM1325 8012425 YP_002975161.1 CDS Rleg_1330 NC_012850.1 1310369 1310722 D PFAM: protein of unknown function DUF861 cupin_3; KEGG: rec:RHECIAT_CH0001655 hypothetical protein; hypothetical protein 1310369..1310722 Rhizobium leguminosarum bv. trifolii WSM1325 8012426 YP_002975162.1 CDS Rleg_1331 NC_012850.1 1310992 1313121 D KEGG: rec:RHECIAT_CH0001656 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1310992..1313121 Rhizobium leguminosarum bv. trifolii WSM1325 8012427 YP_002975163.1 CDS Rleg_1332 NC_012850.1 1313423 1314493 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: xac:XAC1577 ABC transporter phosphate binding protein; phosphate ABC transporter substrate-binding protein 1313423..1314493 Rhizobium leguminosarum bv. trifolii WSM1325 8012428 YP_002975164.1 CDS Rleg_1333 NC_012850.1 1314581 1315558 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smt:Smal_1310 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease 1314581..1315558 Rhizobium leguminosarum bv. trifolii WSM1325 8012429 YP_002975165.1 CDS Rleg_1334 NC_012850.1 1315561 1316418 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xoo:XOO2464 ABC transporter phosphate permease; phosphate ABC transporter permease 1315561..1316418 Rhizobium leguminosarum bv. trifolii WSM1325 8012430 YP_002975166.1 CDS Rleg_1335 NC_012850.1 1316415 1317221 D KEGG: smt:Smal_1308 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: AAA ATPase; phosphate ABC transporter ATPase 1316415..1317221 Rhizobium leguminosarum bv. trifolii WSM1325 8012431 YP_002975167.1 CDS Rleg_1336 NC_012850.1 1317247 1318491 R PFAM: cytochrome P450; KEGG: ret:RHE_CH01585 cytochrome P450 hydroxylase protein; cytochrome P450 complement(1317247..1318491) Rhizobium leguminosarum bv. trifolii WSM1325 8012432 YP_002975168.1 CDS Rleg_1337 NC_012850.1 1318553 1319836 R KEGG: ret:RHE_CH01586 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1318553..1319836) Rhizobium leguminosarum bv. trifolii WSM1325 8012433 YP_002975169.1 CDS clpP NC_012850.1 1320259 1320888 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1320259..1320888 Rhizobium leguminosarum bv. trifolii WSM1325 8012434 YP_002975170.1 CDS clpX NC_012850.1 1321192 1322469 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1321192..1322469 Rhizobium leguminosarum bv. trifolii WSM1325 8012435 YP_002975171.1 CDS Rleg_1340 NC_012850.1 1322871 1325288 D KEGG: rec:RHECIAT_CH0001661 ATP-dependent protease La protein; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La 1322871..1325288 Rhizobium leguminosarum bv. trifolii WSM1325 8012436 YP_002975172.1 CDS Rleg_1341 NC_012850.1 1325495 1325770 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: rec:RHECIAT_CH0001662 bacterial nucleoid DNA-binding protein; histone family protein DNA-binding protein 1325495..1325770 Rhizobium leguminosarum bv. trifolii WSM1325 8012437 YP_002975173.1 CDS Rleg_1342 NC_012850.1 1326139 1327050 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0001663 permease protein; hypothetical protein 1326139..1327050 Rhizobium leguminosarum bv. trifolii WSM1325 8012438 YP_002975174.1 CDS Rleg_1343 NC_012850.1 1327136 1329334 D KEGG: ret:RHE_CH01592 alkaline phosphatase protein; alkaline phosphatase protein 1327136..1329334 Rhizobium leguminosarum bv. trifolii WSM1325 8012439 YP_002975175.1 CDS Rleg_1344 NC_012850.1 1329409 1330395 R PFAM: aldo/keto reductase; KEGG: ret:RHE_CH01593 oxidoreductase protein; aldo/keto reductase complement(1329409..1330395) Rhizobium leguminosarum bv. trifolii WSM1325 8012440 YP_002975176.1 CDS Rleg_1345 NC_012850.1 1330633 1331034 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH01594 hypothetical protein; cupin 1330633..1331034 Rhizobium leguminosarum bv. trifolii WSM1325 8012441 YP_002975177.1 CDS Rleg_1346 NC_012850.1 1331040 1331645 R KEGG: ret:RHE_CH01595 hypothetical protein; hypothetical protein complement(1331040..1331645) Rhizobium leguminosarum bv. trifolii WSM1325 8012442 YP_002975178.1 CDS Rleg_1347 NC_012850.1 1331814 1332167 D KEGG: ret:RHE_CH01596 hypothetical protein; hypothetical protein 1331814..1332167 Rhizobium leguminosarum bv. trifolii WSM1325 8012443 YP_002975179.1 CDS Rleg_1348 NC_012850.1 1332298 1332846 D PFAM: glutathione peroxidase; KEGG: rec:RHECIAT_CH0001669 glutathione peroxidase protein; glutathione peroxidase 1332298..1332846 Rhizobium leguminosarum bv. trifolii WSM1325 8012444 YP_002975180.1 CDS Rleg_1349 NC_012850.1 1332958 1333170 R KEGG: rec:RHECIAT_CH0001670 hypothetical protein; hypothetical protein complement(1332958..1333170) Rhizobium leguminosarum bv. trifolii WSM1325 8012445 YP_002975181.1 CDS Rleg_1350 NC_012850.1 1333488 1333886 R hypothetical protein complement(1333488..1333886) Rhizobium leguminosarum bv. trifolii WSM1325 8012446 YP_002975182.1 CDS Rleg_1351 NC_012850.1 1334948 1335316 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1334948..1335316 Rhizobium leguminosarum bv. trifolii WSM1325 8012449 YP_002975183.1 CDS Rleg_1352 NC_012850.1 1335307 1335891 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1335307..1335891 Rhizobium leguminosarum bv. trifolii WSM1325 8015552 YP_002975184.1 CDS Rleg_1353 NC_012850.1 1335910 1336512 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1335910..1336512 Rhizobium leguminosarum bv. trifolii WSM1325 8012450 YP_002975185.1 CDS Rleg_1354 NC_012850.1 1336577 1337767 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1336577..1337767 Rhizobium leguminosarum bv. trifolii WSM1325 8012451 YP_002975186.1 CDS Rleg_1355 NC_012850.1 1337767 1338039 D KEGG: ret:RHE_CH01607 hypothetical protein; hypothetical protein 1337767..1338039 Rhizobium leguminosarum bv. trifolii WSM1325 8015553 YP_002975187.1 CDS Rleg_1356 NC_012850.1 1338056 1339222 D catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit E 1338056..1339222 Rhizobium leguminosarum bv. trifolii WSM1325 8012452 YP_002975188.1 CDS Rleg_1357 NC_012850.1 1339233 1340537 D part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1339233..1340537 Rhizobium leguminosarum bv. trifolii WSM1325 8012453 YP_002975189.1 CDS Rleg_1358 NC_012850.1 1340540 1341220 D KEGG: rec:RHECIAT_CH0001682 protein in NADH-ubiquinone oxidoreductase complex; protein in NADH-ubiquinone oxidoreductase complex 1340540..1341220 Rhizobium leguminosarum bv. trifolii WSM1325 8012454 YP_002975190.1 CDS Rleg_1359 NC_012850.1 1341439 1343520 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1341439..1343520 Rhizobium leguminosarum bv. trifolii WSM1325 8012455 YP_002975191.1 CDS Rleg_1360 NC_012850.1 1343533 1344576 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1343533..1344576 Rhizobium leguminosarum bv. trifolii WSM1325 8012456 YP_002975192.1 CDS Rleg_1361 NC_012850.1 1344617 1345108 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1344617..1345108 Rhizobium leguminosarum bv. trifolii WSM1325 8012457 YP_002975193.1 CDS Rleg_1362 NC_012850.1 1345253 1345867 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1345253..1345867 Rhizobium leguminosarum bv. trifolii WSM1325 8012458 YP_002975194.1 CDS Rleg_1363 NC_012850.1 1345891 1346199 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1345891..1346199 Rhizobium leguminosarum bv. trifolii WSM1325 8012459 YP_002975195.1 CDS Rleg_1364 NC_012850.1 1346207 1348207 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1346207..1348207 Rhizobium leguminosarum bv. trifolii WSM1325 8012460 YP_002975196.1 CDS Rleg_1365 NC_012850.1 1348207 1349718 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1348207..1349718 Rhizobium leguminosarum bv. trifolii WSM1325 8012461 YP_002975197.1 CDS Rleg_1366 NC_012850.1 1349737 1351182 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1349737..1351182 Rhizobium leguminosarum bv. trifolii WSM1325 8012462 YP_002975198.1 CDS Rleg_1367 NC_012850.1 1351182 1351946 D TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; KEGG: rec:RHECIAT_CH0001691 biotin--[acetyl-CoA carboxylase] synthetase protein; biotin--acetyl-CoA-carboxylase ligase 1351182..1351946 Rhizobium leguminosarum bv. trifolii WSM1325 8012463 YP_002975199.1 CDS Rleg_1368 NC_012850.1 1351964 1353634 D PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: rec:RHECIAT_CH0001692 metallo-beta-lactamase family protein; beta-lactamase 1351964..1353634 Rhizobium leguminosarum bv. trifolii WSM1325 8012464 YP_002975200.1 CDS Rleg_1369 NC_012850.1 1353637 1354041 D KEGG: ret:RHE_CH01621 lactoylglutathione lyase protein; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase 1353637..1354041 Rhizobium leguminosarum bv. trifolii WSM1325 8012465 YP_002975201.1 CDS Rleg_1370 NC_012850.1 1354155 1354430 D PFAM: protein of unknown function DUF1467; KEGG: rec:RHECIAT_CH0001694 hypothetical protein; hypothetical protein 1354155..1354430 Rhizobium leguminosarum bv. trifolii WSM1325 8012466 YP_002975202.1 CDS Rleg_1371 NC_012850.1 1355021 1356343 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1355021..1356343 Rhizobium leguminosarum bv. trifolii WSM1325 8012467 YP_002975203.1 CDS Rleg_1372 NC_012850.1 1356359 1357663 D TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: ret:RHE_CH01624 lipoprotein ABC transporter, permease protein; lipoprotein releasing system transmembrane protein LolC/E family 1356359..1357663 Rhizobium leguminosarum bv. trifolii WSM1325 8012468 YP_002975204.1 CDS Rleg_1373 NC_012850.1 1357678 1358361 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001697 probable lipoprotein ABC transporter, ATP-binding protein; ABC transporter 1357678..1358361 Rhizobium leguminosarum bv. trifolii WSM1325 8012469 YP_002975205.1 CDS Rleg_1374 NC_012850.1 1358635 1359099 R KEGG: rec:RHECIAT_CH0001698 hypothetical protein; hypothetical protein complement(1358635..1359099) Rhizobium leguminosarum bv. trifolii WSM1325 8012470 YP_002975206.1 CDS dnaE NC_012850.1 1359604 1363101 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1359604..1363101 Rhizobium leguminosarum bv. trifolii WSM1325 8015554 YP_002975207.1 CDS Rleg_1376 NC_012850.1 1363113 1364372 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_CH01628 hypothetical protein; hypothetical protein complement(1363113..1364372) Rhizobium leguminosarum bv. trifolii WSM1325 8012471 YP_002975208.1 CDS Rleg_1377 NC_012850.1 1364465 1365760 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(1364465..1365760) Rhizobium leguminosarum bv. trifolii WSM1325 8012472 YP_002975209.1 CDS Rleg_1378 NC_012850.1 1365828 1366421 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0001702 acetyltransferase protein; N-acetyltransferase GCN5 1365828..1366421 Rhizobium leguminosarum bv. trifolii WSM1325 8015555 YP_002975210.1 CDS Rleg_1379 NC_012850.1 1366396 1367070 R KEGG: ret:RHE_CH01631 hypothetical protein; hypothetical protein complement(1366396..1367070) Rhizobium leguminosarum bv. trifolii WSM1325 8012473 YP_002975211.1 CDS Rleg_1380 NC_012850.1 1367073 1367381 R KEGG: rec:RHECIAT_CH0001704 hypothetical protein; hypothetical protein complement(1367073..1367381) Rhizobium leguminosarum bv. trifolii WSM1325 8012474 YP_002975212.1 CDS Rleg_1381 NC_012850.1 1367514 1367885 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0001705 two-component response regulator protein; response regulator receiver protein 1367514..1367885 Rhizobium leguminosarum bv. trifolii WSM1325 8015556 YP_002975213.1 CDS pleD NC_012850.1 1367904 1369277 D involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 1367904..1369277 Rhizobium leguminosarum bv. trifolii WSM1325 8012475 YP_002975214.1 CDS rpmG NC_012850.1 1370025 1370192 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(1370025..1370192) Rhizobium leguminosarum bv. trifolii WSM1325 8012476 YP_002975215.1 CDS Rleg_1384 NC_012850.1 1370285 1371469 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH01635 ABC transporter permease; major facilitator superfamily protein complement(1370285..1371469) Rhizobium leguminosarum bv. trifolii WSM1325 8012477 YP_002975216.1 CDS Rleg_1385 NC_012850.1 1371723 1372178 R PFAM: protein of unknown function DUF983; KEGG: rec:RHECIAT_CH0001709 hypothetical protein; hypothetical protein complement(1371723..1372178) Rhizobium leguminosarum bv. trifolii WSM1325 8012478 YP_002975217.1 CDS Rleg_1386 NC_012850.1 1372302 1374674 R KEGG: rec:RHECIAT_CH0001710 exoribonuclease R protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: RNA binding S1 domain protein; SNP /replace=T; ribonuclease R complement(1372302..1374674) Rhizobium leguminosarum bv. trifolii WSM1325 8012479 YP_002975218.1 CDS Rleg_1387 NC_012850.1 1374676 1377330 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(1374676..1377330) Rhizobium leguminosarum bv. trifolii WSM1325 8012480 YP_002975219.1 CDS Rleg_1388 NC_012850.1 1377579 1378721 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rec:RHECIAT_CH0001712 DNA processing chain A protein; DNA protecting protein DprA complement(1377579..1378721) Rhizobium leguminosarum bv. trifolii WSM1325 8012481 YP_002975220.1 CDS Rleg_1389 NC_012850.1 1378721 1379341 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY complement(1378721..1379341) Rhizobium leguminosarum bv. trifolii WSM1325 8012482 YP_002975221.1 CDS Rleg_1390 NC_012850.1 1379420 1380709 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(1379420..1380709) Rhizobium leguminosarum bv. trifolii WSM1325 8012483 YP_002975222.1 CDS pyrB NC_012850.1 1380706 1381662 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(1380706..1381662) Rhizobium leguminosarum bv. trifolii WSM1325 8012484 YP_002975223.1 CDS Rleg_1392 NC_012850.1 1381842 1383500 D PFAM: acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 domain; KEGG: ret:RHE_CH01643 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase 1381842..1383500 Rhizobium leguminosarum bv. trifolii WSM1325 8012485 YP_002975224.1 CDS Rleg_1393 NC_012850.1 1383909 1386770 R TIGRFAM: ribonuclease, Rne/Rng family; KEGG: rec:RHECIAT_CH0001717 probable ribonuclease protein; ribonuclease, Rne/Rng family complement(1383909..1386770) Rhizobium leguminosarum bv. trifolii WSM1325 8012486 YP_002975225.1 CDS Rleg_1394 NC_012850.1 1387323 1388651 D KEGG: ret:RHE_CH01646 N-acetylmuramoyl-L-alanine amidase protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 1387323..1388651 Rhizobium leguminosarum bv. trifolii WSM1325 8012487 YP_002975226.1 CDS Rleg_1395 NC_012850.1 1389042 1391471 D TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rec:RHECIAT_CH0001720 penicillin binding peptidoglycan synthetase protein; penicillin-binding protein 1389042..1391471 Rhizobium leguminosarum bv. trifolii WSM1325 8012488 YP_002975227.1 CDS Rleg_1396 NC_012850.1 1391575 1392706 D catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 join(1391575..1391643,1391645..1392706) Rhizobium leguminosarum bv. trifolii WSM1325 8015557 YP_002975228.1 CDS Rleg_1397 NC_012850.1 1393026 1394504 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sugar ABC transporter ; K10441 ribose transport system ATP-binding protein; ABC transporter 1393026..1394504 Rhizobium leguminosarum bv. trifolii WSM1325 8012489 YP_002975229.1 CDS Rleg_1398 NC_012850.1 1394548 1395552 D PFAM: inner-membrane translocator; KEGG: sugar ABC transporter ; K10440 ribose transport system permease protein; inner-membrane translocator 1394548..1395552 Rhizobium leguminosarum bv. trifolii WSM1325 8012490 YP_002975230.1 CDS Rleg_1399 NC_012850.1 1395641 1396627 D KEGG: bcs:BCAN_A1667 rhizopine-binding protein precursor; rhizopine-binding protein 1395641..1396627 Rhizobium leguminosarum bv. trifolii WSM1325 8015558 YP_002975231.1 CDS Rleg_1400 NC_012850.1 1396686 1397456 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcs:BCAN_A1666 short chain dehydrogenase; short chain dehydrogenase 1396686..1397456 Rhizobium leguminosarum bv. trifolii WSM1325 8012491 YP_002975232.1 CDS Rleg_1401 NC_012850.1 1397479 1398474 D PFAM: Dak kinase; KEGG: smd:Smed_3823 glycerone kinase; Glycerone kinase 1397479..1398474 Rhizobium leguminosarum bv. trifolii WSM1325 8012492 YP_002975233.1 CDS Rleg_1402 NC_012850.1 1398490 1399140 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: sme:SM_b20313 glycerone kinase; dihydroxyacetone kinase subunit DhaL 1398490..1399140 Rhizobium leguminosarum bv. trifolii WSM1325 8015559 YP_002975234.1 CDS Rleg_1403 NC_012850.1 1399297 1401399 D PFAM: Dak kinase; sugar-binding domain protein; KEGG: dihydroxyacetone kinase ; K05878 dihydroxyacetone kinase, N-terminal domain; Glycerone kinase 1399297..1401399 Rhizobium leguminosarum bv. trifolii WSM1325 8012493 YP_002975235.1 CDS Rleg_1404 NC_012850.1 1401461 1402126 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: dihydroxyacetone kinase, L subunit ; K05879 dihydroxyacetone kinase, C-terminal domain; dihydroxyacetone kinase subunit DhaL 1401461..1402126 Rhizobium leguminosarum bv. trifolii WSM1325 8012494 YP_002975236.1 CDS Rleg_1405 NC_012850.1 1402186 1403214 R KEGG: rec:RHECIAT_CH0001722 hypothetical protein; hypothetical protein complement(1402186..1403214) Rhizobium leguminosarum bv. trifolii WSM1325 8012495 YP_002975237.1 CDS Rleg_1406 NC_012850.1 1403249 1403764 R KEGG: rec:RHECIAT_CH0001723 hypothetical protein; hypothetical protein complement(1403249..1403764) Rhizobium leguminosarum bv. trifolii WSM1325 8012496 YP_002975238.1 CDS ppnK NC_012850.1 1403769 1404542 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1403769..1404542) Rhizobium leguminosarum bv. trifolii WSM1325 8012497 YP_002975239.1 CDS Rleg_1408 NC_012850.1 1405214 1405468 D hypothetical protein 1405214..1405468 Rhizobium leguminosarum bv. trifolii WSM1325 8012499 YP_002975240.1 CDS Rleg_1409 NC_012850.1 1405458 1405595 R hypothetical protein complement(1405458..1405595) Rhizobium leguminosarum bv. trifolii WSM1325 8012500 YP_002975241.1 CDS Rleg_1410 NC_012850.1 1405660 1405818 R KEGG: rec:RHECIAT_CH0001727 hypothetical protein; hypothetical protein complement(1405660..1405818) Rhizobium leguminosarum bv. trifolii WSM1325 8012501 YP_002975242.1 CDS Rleg_1411 NC_012850.1 1405944 1406636 R KEGG: ret:RHE_CH01654 metalloprotease inhibitor (transcriptional regulator) protein; metalloprotease inhibitor (transcriptional regulator) protein complement(1405944..1406636) Rhizobium leguminosarum bv. trifolii WSM1325 8012502 YP_002975243.1 CDS Rleg_1412 NC_012850.1 1406730 1407620 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ret:RHE_CH01655 tRNA/rRNA methyltransferase protein; TrmH family RNA methyltransferase complement(1406730..1407620) Rhizobium leguminosarum bv. trifolii WSM1325 8012503 YP_002975244.1 CDS Rleg_1413 NC_012850.1 1408354 1409529 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1408354..1409529 Rhizobium leguminosarum bv. trifolii WSM1325 8012506 YP_002975245.1 CDS Rleg_1414 NC_012850.1 1409732 1409866 D hypothetical protein 1409732..1409866 Rhizobium leguminosarum bv. trifolii WSM1325 8012507 YP_002975246.1 CDS Rleg_1415 NC_012850.1 1410038 1410931 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0001733 probable nucleoside-diphosphate-sugar epimerase protein; NAD-dependent epimerase/dehydratase 1410038..1410931 Rhizobium leguminosarum bv. trifolii WSM1325 8012508 YP_002975247.1 CDS secE NC_012850.1 1411371 1411571 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1411371..1411571 Rhizobium leguminosarum bv. trifolii WSM1325 8012510 YP_002975248.1 CDS nusG NC_012850.1 1411589 1412119 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1411589..1412119 Rhizobium leguminosarum bv. trifolii WSM1325 8012511 YP_002975249.1 CDS rplK NC_012850.1 1412296 1412727 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1412296..1412727 Rhizobium leguminosarum bv. trifolii WSM1325 8012512 YP_002975250.1 CDS rplA NC_012850.1 1412732 1413433 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1412732..1413433 Rhizobium leguminosarum bv. trifolii WSM1325 8012513 YP_002975251.1 CDS rplJ NC_012850.1 1413763 1414281 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1413763..1414281 Rhizobium leguminosarum bv. trifolii WSM1325 8015560 YP_002975252.1 CDS rplL NC_012850.1 1414339 1414716 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1414339..1414716 Rhizobium leguminosarum bv. trifolii WSM1325 8012514 YP_002975253.1 CDS rpoB NC_012850.1 1414979 1419118 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1414979..1419118 Rhizobium leguminosarum bv. trifolii WSM1325 8012515 YP_002975254.1 CDS Rleg_1423 NC_012850.1 1419308 1423516 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1419308..1423516 Rhizobium leguminosarum bv. trifolii WSM1325 8015561 YP_002975255.1 CDS Rleg_1424 NC_012850.1 1423654 1423947 R KEGG: rec:RHECIAT_CH0001743 hypothetical protein; hypothetical protein complement(1423654..1423947) Rhizobium leguminosarum bv. trifolii WSM1325 8012516 YP_002975256.1 CDS rpsL NC_012850.1 1424445 1424816 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1424445..1424816 Rhizobium leguminosarum bv. trifolii WSM1325 8015562 YP_002975257.1 CDS Rleg_1426 NC_012850.1 1424893 1425363 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1424893..1425363 Rhizobium leguminosarum bv. trifolii WSM1325 8012517 YP_002975258.1 CDS Rleg_1427 NC_012850.1 1425393 1427492 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1425393..1427492 Rhizobium leguminosarum bv. trifolii WSM1325 8012518 YP_002975259.1 CDS Rleg_1428 NC_012850.1 1427561 1428736 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1427561..1428736 Rhizobium leguminosarum bv. trifolii WSM1325 8012519 YP_002975260.1 CDS rpsJ NC_012850.1 1428891 1429199 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1428891..1429199 Rhizobium leguminosarum bv. trifolii WSM1325 8012520 YP_002975261.1 CDS rplC NC_012850.1 1429239 1429880 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1429239..1429880 Rhizobium leguminosarum bv. trifolii WSM1325 8012521 YP_002975262.1 CDS rplD NC_012850.1 1429894 1430514 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1429894..1430514 Rhizobium leguminosarum bv. trifolii WSM1325 8012522 YP_002975263.1 CDS rplW NC_012850.1 1430511 1430804 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1430511..1430804 Rhizobium leguminosarum bv. trifolii WSM1325 8012523 YP_002975264.1 CDS rplB NC_012850.1 1430816 1431652 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1430816..1431652 Rhizobium leguminosarum bv. trifolii WSM1325 8012524 YP_002975265.1 CDS rpsS NC_012850.1 1431668 1431946 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1431668..1431946 Rhizobium leguminosarum bv. trifolii WSM1325 8012525 YP_002975266.1 CDS rplV NC_012850.1 1431949 1432338 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1431949..1432338 Rhizobium leguminosarum bv. trifolii WSM1325 8012526 YP_002975267.1 CDS rpsC NC_012850.1 1432338 1433069 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1432338..1433069 Rhizobium leguminosarum bv. trifolii WSM1325 8012527 YP_002975268.1 CDS rplP NC_012850.1 1433106 1433519 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1433106..1433519 Rhizobium leguminosarum bv. trifolii WSM1325 8012528 YP_002975269.1 CDS Rleg_1438 NC_012850.1 1433531 1433731 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1433531..1433731 Rhizobium leguminosarum bv. trifolii WSM1325 8012529 YP_002975270.1 CDS rpsQ NC_012850.1 1433744 1433983 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1433744..1433983 Rhizobium leguminosarum bv. trifolii WSM1325 8012530 YP_002975271.1 CDS rplN NC_012850.1 1434242 1434610 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1434242..1434610 Rhizobium leguminosarum bv. trifolii WSM1325 8012531 YP_002975272.1 CDS rplX NC_012850.1 1434622 1434930 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1434622..1434930 Rhizobium leguminosarum bv. trifolii WSM1325 8015563 YP_002975273.1 CDS rplE NC_012850.1 1434923 1435480 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1434923..1435480 Rhizobium leguminosarum bv. trifolii WSM1325 8012532 YP_002975274.1 CDS rpsN NC_012850.1 1435513 1435818 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1435513..1435818 Rhizobium leguminosarum bv. trifolii WSM1325 8012533 YP_002975275.1 CDS rpsH NC_012850.1 1435831 1436229 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1435831..1436229 Rhizobium leguminosarum bv. trifolii WSM1325 8012534 YP_002975276.1 CDS rplF NC_012850.1 1436272 1436805 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1436272..1436805 Rhizobium leguminosarum bv. trifolii WSM1325 8012535 YP_002975277.1 CDS rplR NC_012850.1 1436818 1437180 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1436818..1437180 Rhizobium leguminosarum bv. trifolii WSM1325 8015564 YP_002975278.1 CDS rpsE NC_012850.1 1437312 1437881 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1437312..1437881 Rhizobium leguminosarum bv. trifolii WSM1325 8012536 YP_002975279.1 CDS rpmD NC_012850.1 1437896 1438105 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1437896..1438105 Rhizobium leguminosarum bv. trifolii WSM1325 8012537 YP_002975280.1 CDS rplO NC_012850.1 1438122 1438598 D late assembly protein; 50S ribosomal protein L15 1438122..1438598 Rhizobium leguminosarum bv. trifolii WSM1325 8012538 YP_002975281.1 CDS secY NC_012850.1 1438834 1440174 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1438834..1440174 Rhizobium leguminosarum bv. trifolii WSM1325 8012539 YP_002975282.1 CDS adk NC_012850.1 1440171 1440821 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1440171..1440821 Rhizobium leguminosarum bv. trifolii WSM1325 8012540 YP_002975283.1 CDS rpsM NC_012850.1 1441043 1441411 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1441043..1441411 Rhizobium leguminosarum bv. trifolii WSM1325 8012541 YP_002975284.1 CDS Rleg_1453 NC_012850.1 1441545 1441934 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1441545..1441934 Rhizobium leguminosarum bv. trifolii WSM1325 8012542 YP_002975285.1 CDS Rleg_1454 NC_012850.1 1442032 1443042 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1442032..1443042 Rhizobium leguminosarum bv. trifolii WSM1325 8012543 YP_002975286.1 CDS rplQ NC_012850.1 1443166 1443588 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1443166..1443588 Rhizobium leguminosarum bv. trifolii WSM1325 8012544 YP_002975287.1 CDS Rleg_1456 NC_012850.1 1443641 1444141 D KEGG: rec:RHECIAT_CH0001776 hypothetical protein; hypothetical protein 1443641..1444141 Rhizobium leguminosarum bv. trifolii WSM1325 8012545 YP_002975288.1 CDS Rleg_1457 NC_012850.1 1444138 1444806 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ complement(1444138..1444806) Rhizobium leguminosarum bv. trifolii WSM1325 8012546 YP_002975289.1 CDS Rleg_1458 NC_012850.1 1444806 1445753 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY complement(1444806..1445753) Rhizobium leguminosarum bv. trifolii WSM1325 8012547 YP_002975290.1 CDS Rleg_1459 NC_012850.1 1446089 1447927 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1446089..1447927 Rhizobium leguminosarum bv. trifolii WSM1325 8012548 YP_002975291.1 CDS Rleg_1460 NC_012850.1 1447952 1448101 D hypothetical protein 1447952..1448101 Rhizobium leguminosarum bv. trifolii WSM1325 8012549 YP_002975292.1 CDS Rleg_1461 NC_012850.1 1448098 1448451 R KEGG: ret:RHE_CH01705 hypothetical protein; hypothetical protein complement(1448098..1448451) Rhizobium leguminosarum bv. trifolii WSM1325 8015565 YP_002975293.1 CDS Rleg_1462 NC_012850.1 1448475 1448855 R PFAM: protein of unknown function DUF1232; KEGG: ret:RHE_CH01706 hypothetical protein; hypothetical protein complement(1448475..1448855) Rhizobium leguminosarum bv. trifolii WSM1325 8012550 YP_002975294.1 CDS Rleg_1463 NC_012850.1 1449112 1450515 D KEGG: rec:RHECIAT_CH0001782 serine protease precursor protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; protease Do 1449112..1450515 Rhizobium leguminosarum bv. trifolii WSM1325 8012551 YP_002975295.1 CDS Rleg_1464 NC_012850.1 1450512 1451828 D PFAM: AAA ATPase; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001783 ATPase protein; recombination factor protein RarA 1450512..1451828 Rhizobium leguminosarum bv. trifolii WSM1325 8012552 YP_002975296.1 CDS Rleg_1465 NC_012850.1 1451842 1452153 R PFAM: Domain of unknown function DUF1883; KEGG: rec:RHECIAT_CH0001785 hypothetical protein; hypothetical protein complement(1451842..1452153) Rhizobium leguminosarum bv. trifolii WSM1325 8012553 YP_002975297.1 CDS Rleg_1466 NC_012850.1 1452286 1452549 R KEGG: hypothetical protein; hypothetical protein complement(1452286..1452549) Rhizobium leguminosarum bv. trifolii WSM1325 8015566 YP_002975298.1 CDS Rleg_1467 NC_012850.1 1452576 1452758 R hypothetical protein complement(1452576..1452758) Rhizobium leguminosarum bv. trifolii WSM1325 8012554 YP_002975299.1 CDS Rleg_1468 NC_012850.1 1453151 1453732 R PFAM: dihydrodipicolinate synthetase; KEGG: dapA; dihydrodipicolinate synthase ; K01714 dihydrodipicolinate synthase; SNP /replace=A; dihydrodipicolinate synthetase complement(1453151..1453732) Rhizobium leguminosarum bv. trifolii WSM1325 8012555 YP_002975300.1 CDS Rleg_1469 NC_012850.1 1453741 1453899 R hypothetical protein complement(1453741..1453899) Rhizobium leguminosarum bv. trifolii WSM1325 8012556 YP_002975301.1 CDS Rleg_1470 NC_012850.1 1454084 1455031 D PFAM: alpha/beta hydrolase fold; KEGG: acp:A2cp1_3368 alpha/beta hydrolase; alpha/beta hydrolase 1454084..1455031 Rhizobium leguminosarum bv. trifolii WSM1325 8015567 YP_002975302.1 CDS Rleg_1471 NC_012850.1 1455073 1456077 R KEGG: ret:RHE_CH01710 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(1455073..1456077) Rhizobium leguminosarum bv. trifolii WSM1325 8012557 YP_002975303.1 CDS Rleg_1472 NC_012850.1 1456226 1457077 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH01711 dehydrogenase protein; short-chain dehydrogenase/reductase SDR complement(1456226..1457077) Rhizobium leguminosarum bv. trifolii WSM1325 8012558 YP_002975304.1 CDS Rleg_1473 NC_012850.1 1457204 1458091 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0001788 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 1457204..1458091 Rhizobium leguminosarum bv. trifolii WSM1325 8012559 YP_002975305.1 CDS Rleg_1474 NC_012850.1 1458066 1458656 R PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: ret:RHE_CH01713 nucleoside 2-deoxyribosyltransferase protein; nucleoside 2-deoxyribosyltransferase complement(1458066..1458656) Rhizobium leguminosarum bv. trifolii WSM1325 8012560 YP_002975306.1 CDS Rleg_1475 NC_012850.1 1459054 1460097 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ret:RHE_CH01714 esterase/lipase/thioesterase family protein; Alpha/beta hydrolase fold-3 domain-containing protein 1459054..1460097 Rhizobium leguminosarum bv. trifolii WSM1325 8012561 YP_002975307.1 CDS Rleg_1476 NC_012850.1 1460138 1460755 R PFAM: carboxymuconolactone decarboxylase; KEGG: rec:RHECIAT_CH0001791 hypothetical protein; carboxymuconolactone decarboxylase complement(1460138..1460755) Rhizobium leguminosarum bv. trifolii WSM1325 8012562 YP_002975308.1 CDS Rleg_1477 NC_012850.1 1460819 1462354 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: rec:RHECIAT_CH0001792 two-component sensor histidine kinase protein; PAS/PAC sensor signal transduction histidine kinase complement(1460819..1462354) Rhizobium leguminosarum bv. trifolii WSM1325 8012563 YP_002975309.1 CDS Rleg_1478 NC_012850.1 1462946 1463992 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_CH0001794 transcriptional regulator protein, LacI family; LacI family transcriptional regulator 1462946..1463992 Rhizobium leguminosarum bv. trifolii WSM1325 8012564 YP_002975310.1 CDS Rleg_1479 NC_012850.1 1464002 1465615 D PFAM: coenzyme A transferase; KEGG: ret:RHE_CH01720 acyl-CoA transferase protein; coenzyme A transferase 1464002..1465615 Rhizobium leguminosarum bv. trifolii WSM1325 8012565 YP_002975311.1 CDS Rleg_1480 NC_012850.1 1465608 1466387 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rec:RHECIAT_CH0001796 probable enoyl-CoA hydratase protein; Enoyl-CoA hydratase/isomerase 1465608..1466387 Rhizobium leguminosarum bv. trifolii WSM1325 8012566 YP_002975312.1 CDS Rleg_1481 NC_012850.1 1466387 1467907 D PFAM: aldehyde Dehydrogenase; KEGG: rec:RHECIAT_CH0001797 probable NAD-dependent L-sorbosone dehydrogenase protein; aldehyde Dehydrogenase 1466387..1467907 Rhizobium leguminosarum bv. trifolii WSM1325 8012567 YP_002975313.1 CDS Rleg_1482 NC_012850.1 1468098 1469360 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0001798 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 1468098..1469360 Rhizobium leguminosarum bv. trifolii WSM1325 8012568 YP_002975314.1 CDS Rleg_1483 NC_012850.1 1469516 1470469 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003982 probable sugar ABC transporter, permease protein; ABC transporter permease 1469516..1470469 Rhizobium leguminosarum bv. trifolii WSM1325 8012569 YP_002975315.1 CDS Rleg_1484 NC_012850.1 1470466 1471410 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH03707 sugar ABC transporter, permease protein; ABC transporter permease 1470466..1471410 Rhizobium leguminosarum bv. trifolii WSM1325 8012570 YP_002975316.1 CDS Rleg_1485 NC_012850.1 1471414 1472529 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003980 probable sugar ABC transporter, ATP-binding protein; ABC transporter 1471414..1472529 Rhizobium leguminosarum bv. trifolii WSM1325 8015568 YP_002975317.1 CDS Rleg_1486 NC_012850.1 1472545 1474083 D PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: ret:RHE_CH01727 dehydrogenase protein; glucose-methanol-choline oxidoreductase 1472545..1474083 Rhizobium leguminosarum bv. trifolii WSM1325 8012571 YP_002975318.1 CDS Rleg_1487 NC_012850.1 1474093 1475748 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sme:SMc04390 L-sorbose dehydrogenase, FAD dependent protein; glucose-methanol-choline oxidoreductase 1474093..1475748 Rhizobium leguminosarum bv. trifolii WSM1325 8012572 YP_002975319.1 CDS Rleg_1488 NC_012850.1 1475773 1476942 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0001804 probable succinate dehydrogenase protein; oxidoreductase domain-containing protein 1475773..1476942 Rhizobium leguminosarum bv. trifolii WSM1325 8012573 YP_002975320.1 CDS Rleg_1489 NC_012850.1 1476949 1479033 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rec:RHECIAT_CH0001805 oxidoreductase protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1476949..1479033 Rhizobium leguminosarum bv. trifolii WSM1325 8012574 YP_002975321.1 CDS Rleg_1490 NC_012850.1 1479079 1479261 R KEGG: rec:RHECIAT_CH0001806 hypothetical protein; hypothetical protein complement(1479079..1479261) Rhizobium leguminosarum bv. trifolii WSM1325 8015569 YP_002975322.1 CDS Rleg_1491 NC_012850.1 1479367 1480161 R TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; KEGG: rec:RHECIAT_CH0001808 exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth complement(1479367..1480161) Rhizobium leguminosarum bv. trifolii WSM1325 8012575 YP_002975323.1 CDS Rleg_1493 NC_012850.1 1480328 1480825 R KEGG: ret:RHE_CH01732 hypothetical protein; hypothetical protein complement(1480328..1480825) Rhizobium leguminosarum bv. trifolii WSM1325 8012577 YP_002975324.1 CDS Rleg_1494 NC_012850.1 1481042 1481548 D KEGG: ret:RHE_CH01733 hypothetical protein; hypothetical protein 1481042..1481548 Rhizobium leguminosarum bv. trifolii WSM1325 8012578 YP_002975325.1 CDS Rleg_1495 NC_012850.1 1481576 1482199 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ret:RHE_CH01734 two-component response regulator protein; LuxR family transcriptional regulator complement(1481576..1482199) Rhizobium leguminosarum bv. trifolii WSM1325 8012579 YP_002975326.1 CDS Rleg_1496 NC_012850.1 1482202 1483590 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rec:RHECIAT_CH0001813 probable two-component sensor histidine kinase protein; signal transduction histidine kinase complement(1482202..1483590) Rhizobium leguminosarum bv. trifolii WSM1325 8012580 YP_002975327.1 CDS Rleg_1497 NC_012850.1 1483653 1483829 R KEGG: rec:RHECIAT_CH0001814 hypothetical protein; hypothetical protein complement(1483653..1483829) Rhizobium leguminosarum bv. trifolii WSM1325 8012581 YP_002975328.1 CDS Rleg_1498 NC_012850.1 1483996 1484154 D KEGG: ret:RHE_CH01736 ubiquinone/menaquinone biosynthesis methyltransferase protein; ubiquinone/menaquinone biosynthesis methyltransferase protein 1483996..1484154 Rhizobium leguminosarum bv. trifolii WSM1325 8012582 YP_002975329.1 CDS Rleg_1499 NC_012850.1 1484225 1484491 R KEGG: rec:RHECIAT_CH0001816 hypothetical protein; hypothetical protein complement(1484225..1484491) Rhizobium leguminosarum bv. trifolii WSM1325 8012583 YP_002975330.1 CDS Rleg_1500 NC_012850.1 1484790 1485188 D PFAM: protein of unknown function DUF1236; KEGG: ret:RHE_CH01737 hypothetical protein; hypothetical protein 1484790..1485188 Rhizobium leguminosarum bv. trifolii WSM1325 8012584 YP_002975331.1 CDS Rleg_1501 NC_012850.1 1485348 1485515 D hypothetical protein 1485348..1485515 Rhizobium leguminosarum bv. trifolii WSM1325 8012585 YP_002975332.1 CDS Rleg_1502 NC_012850.1 1485512 1486093 D PFAM: BA14K family protein; KEGG: rec:RHECIAT_CH0001819 hypothetical protein; BA14K family protein 1485512..1486093 Rhizobium leguminosarum bv. trifolii WSM1325 8012586 YP_002975333.1 CDS Rleg_1503 NC_012850.1 1486215 1486529 D KEGG: rec:RHECIAT_CH0001820 hypothetical protein; hypothetical protein 1486215..1486529 Rhizobium leguminosarum bv. trifolii WSM1325 8012587 YP_002975334.1 CDS Rleg_1504 NC_012850.1 1486601 1487485 D KEGG: rec:RHECIAT_CH0001821 hypothetical protein; hypothetical protein 1486601..1487485 Rhizobium leguminosarum bv. trifolii WSM1325 8012588 YP_002975335.1 CDS Rleg_1505 NC_012850.1 1487533 1488426 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_3272 regulatory protein; LysR family transcriptional regulator complement(1487533..1488426) Rhizobium leguminosarum bv. trifolii WSM1325 8012589 YP_002975336.1 CDS Rleg_1506 NC_012850.1 1488555 1489559 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding domain 1 protein; KEGG: ret:RHE_CH01741 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1488555..1489559 Rhizobium leguminosarum bv. trifolii WSM1325 8012590 YP_002975337.1 CDS phhA NC_012850.1 1489620 1490411 R phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase complement(1489620..1490411) Rhizobium leguminosarum bv. trifolii WSM1325 8012591 YP_002975338.1 CDS Rleg_1508 NC_012850.1 1490535 1490996 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_CH0001824 probable transcriptional regulator protein, AsnC family; AsnC family transcriptional regulator 1490535..1490996 Rhizobium leguminosarum bv. trifolii WSM1325 8012592 YP_002975339.1 CDS Rleg_1509 NC_012850.1 1491048 1491527 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ret:RHE_CH01744 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(1491048..1491527) Rhizobium leguminosarum bv. trifolii WSM1325 8012593 YP_002975340.1 CDS Rleg_1510 NC_012850.1 1491658 1492767 D KEGG: ret:RHE_CH01745 4-hydroxyphenylpyruvate dioxygenase protein; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 1491658..1492767 Rhizobium leguminosarum bv. trifolii WSM1325 8012594 YP_002975341.1 CDS Rleg_1511 NC_012850.1 1492829 1494190 D An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 1492829..1494190 Rhizobium leguminosarum bv. trifolii WSM1325 8012595 YP_002975342.1 CDS Rleg_1512 NC_012850.1 1494230 1495255 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rec:RHECIAT_CH0001828 hydrolase, fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase 1494230..1495255 Rhizobium leguminosarum bv. trifolii WSM1325 8012596 YP_002975343.1 CDS Rleg_1513 NC_012850.1 1495252 1495884 D TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH01748 maleylacetoacetate isomerase protein; maleylacetoacetate isomerase 1495252..1495884 Rhizobium leguminosarum bv. trifolii WSM1325 8012597 YP_002975344.1 CDS Rleg_1514 NC_012850.1 1496071 1496979 R KEGG: rsh:Rsph17029_3205 hypothetical protein; periplasmic protein-like protein complement(1496071..1496979) Rhizobium leguminosarum bv. trifolii WSM1325 8015570 YP_002975345.1 CDS Rleg_1516 NC_012850.1 1501648 1502403 R hypothetical protein complement(1501648..1502403) Rhizobium leguminosarum bv. trifolii WSM1325 8012599 YP_002975346.1 CDS Rleg_1517 NC_012850.1 1502568 1504409 R KEGG: rpb:RPB_2536 hypothetical protein; hypothetical protein complement(1502568..1504409) Rhizobium leguminosarum bv. trifolii WSM1325 8012600 YP_002975347.1 CDS Rleg_1518 NC_012850.1 1504406 1505461 R KEGG: rpe:RPE_2429 hypothetical protein; hypothetical protein complement(1504406..1505461) Rhizobium leguminosarum bv. trifolii WSM1325 8012601 YP_002975348.1 CDS Rleg_1519 NC_012850.1 1505458 1507782 R PFAM: Integrase catalytic region; KEGG: rpe:RPE_2430 integrase, catalytic region; integrase catalytic subunit complement(1505458..1507782) Rhizobium leguminosarum bv. trifolii WSM1325 8015571 YP_002975349.1 CDS Rleg_1520 NC_012850.1 1507787 1508416 R KEGG: pde:Pden_0457 hypothetical protein; hypothetical protein complement(1507787..1508416) Rhizobium leguminosarum bv. trifolii WSM1325 8012602 YP_002975350.1 CDS Rleg_1521 NC_012850.1 1508523 1508654 R hypothetical protein complement(1508523..1508654) Rhizobium leguminosarum bv. trifolii WSM1325 8012603 YP_002975351.1 CDS Rleg_1522 NC_012850.1 1508728 1509096 R hypothetical protein complement(1508728..1509096) Rhizobium leguminosarum bv. trifolii WSM1325 8012604 YP_002975352.1 CDS Rleg_1523 NC_012850.1 1509888 1510697 R hypothetical protein complement(1509888..1510697) Rhizobium leguminosarum bv. trifolii WSM1325 8012605 YP_002975353.1 CDS Rleg_1524 NC_012850.1 1510772 1511368 R KEGG: rec:RHECIAT_CH0003344 hypothetical protein; hypothetical protein complement(1510772..1511368) Rhizobium leguminosarum bv. trifolii WSM1325 8012606 YP_002975354.1 CDS Rleg_1525 NC_012850.1 1511474 1511656 D hypothetical protein 1511474..1511656 Rhizobium leguminosarum bv. trifolii WSM1325 8012607 YP_002975355.1 CDS Rleg_1526 NC_012850.1 1512190 1513311 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pfo:Pfl01_1036 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(1512190..1513311) Rhizobium leguminosarum bv. trifolii WSM1325 8012608 YP_002975356.1 CDS Rleg_1527 NC_012850.1 1513617 1513994 R PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator protein; HxlR family transcriptional regulator complement(1513617..1513994) Rhizobium leguminosarum bv. trifolii WSM1325 8012609 YP_002975357.1 CDS Rleg_1528 NC_012850.1 1514089 1514835 D PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: eca:ECA2935 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 1514089..1514835 Rhizobium leguminosarum bv. trifolii WSM1325 8012610 YP_002975358.1 CDS Rleg_1529 NC_012850.1 1515076 1515372 R hypothetical protein complement(1515076..1515372) Rhizobium leguminosarum bv. trifolii WSM1325 8012611 YP_002975359.1 CDS Rleg_1530 NC_012850.1 1515385 1515711 R KEGG: ret:RHE_CH01240 hypothetical protein; hypothetical protein complement(1515385..1515711) Rhizobium leguminosarum bv. trifolii WSM1325 8012612 YP_002975360.1 CDS Rleg_1531 NC_012850.1 1515956 1516426 D PFAM: heat shock protein Hsp20; KEGG: rec:RHECIAT_PC0000697 probable small heat shock protein; heat shock protein Hsp20 1515956..1516426 Rhizobium leguminosarum bv. trifolii WSM1325 8012613 YP_002975361.1 CDS Rleg_1532 NC_012850.1 1516455 1516724 D KEGG: rec:RHECIAT_PC0000531 hypothetical protein; hypothetical protein 1516455..1516724 Rhizobium leguminosarum bv. trifolii WSM1325 8012614 YP_002975362.1 CDS Rleg_1533 NC_012850.1 1516744 1516932 D hypothetical protein 1516744..1516932 Rhizobium leguminosarum bv. trifolii WSM1325 8012615 YP_002975363.1 CDS Rleg_1534 NC_012850.1 1517108 1518613 R PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: mechanosensitive ion channel protein; cyclic nucleotide-regulated small mechanosensitive ion channel complement(1517108..1518613) Rhizobium leguminosarum bv. trifolii WSM1325 8015572 YP_002975364.1 CDS Rleg_1535 NC_012850.1 1518847 1519362 R PFAM: ferritin Dps family protein; KEGG: atc:AGR_L_212 hypothetical protein; ferritin Dps family protein complement(1518847..1519362) Rhizobium leguminosarum bv. trifolii WSM1325 8012616 YP_002975365.1 CDS Rleg_1536 NC_012850.1 1519467 1519700 R KEGG: atc:AGR_pAT_694 hypothetical protein; hypothetical protein complement(1519467..1519700) Rhizobium leguminosarum bv. trifolii WSM1325 8012617 YP_002975366.1 CDS Rleg_1537 NC_012850.1 1519768 1520292 R KEGG: msl:Msil_3585 cytochrome P460; cytochrome P460 complement(1519768..1520292) Rhizobium leguminosarum bv. trifolii WSM1325 8012618 YP_002975367.1 CDS Rleg_1538 NC_012850.1 1520294 1520989 R PFAM: major intrinsic protein; KEGG: scl:sce5615 MIP family channel protein; major intrinsic protein complement(1520294..1520989) Rhizobium leguminosarum bv. trifolii WSM1325 8012619 YP_002975368.1 CDS Rleg_1539 NC_012850.1 1520971 1521303 R KEGG: lpp:lpp1221 hypothetical protein; hypothetical protein complement(1520971..1521303) Rhizobium leguminosarum bv. trifolii WSM1325 8012620 YP_002975369.1 CDS Rleg_1540 NC_012850.1 1521300 1521947 R PFAM: Nitrile hydratase alpha chain; KEGG: dsh:Dshi_1849 nitrile hydratase; nitrile hydratase complement(1521300..1521947) Rhizobium leguminosarum bv. trifolii WSM1325 8012621 YP_002975370.1 CDS Rleg_1542 NC_012850.1 1522473 1522682 D KEGG: bac:BamMC406_5178 hypothetical protein; hypothetical protein 1522473..1522682 Rhizobium leguminosarum bv. trifolii WSM1325 8012623 YP_002975371.1 CDS Rleg_1543 NC_012850.1 1522693 1523439 D KEGG: bph:Bphy_3436 hypothetical protein; hypothetical protein 1522693..1523439 Rhizobium leguminosarum bv. trifolii WSM1325 8012624 YP_002975372.1 CDS Rleg_1544 NC_012850.1 1523511 1525850 D KEGG: smd:Smed_5524 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1523511..1525850 Rhizobium leguminosarum bv. trifolii WSM1325 8012625 YP_002975373.1 CDS Rleg_1545 NC_012850.1 1525831 1526487 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: atc:AGR_L_218 hypothetical protein; LuxR family transcriptional regulator 1525831..1526487 Rhizobium leguminosarum bv. trifolii WSM1325 8012626 YP_002975374.1 CDS Rleg_1546 NC_012850.1 1526569 1526964 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aba:Acid345_3728 response regulator receiver protein; response regulator receiver protein 1526569..1526964 Rhizobium leguminosarum bv. trifolii WSM1325 8012627 YP_002975375.1 CDS Rleg_1547 NC_012850.1 1527120 1527521 D KEGG: bja:blr7069 hypothetical protein; hypothetical protein 1527120..1527521 Rhizobium leguminosarum bv. trifolii WSM1325 8012628 YP_002975376.1 CDS Rleg_1548 NC_012850.1 1527737 1528285 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: msl:Msil_2566 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(1527737..1528285) Rhizobium leguminosarum bv. trifolii WSM1325 8012629 YP_002975377.1 CDS Rleg_1549 NC_012850.1 1528342 1529292 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:blr6272 transcriptional regulatory protein; AraC family transcriptional regulator complement(1528342..1529292) Rhizobium leguminosarum bv. trifolii WSM1325 8012630 YP_002975378.1 CDS Rleg_1550 NC_012850.1 1529340 1530113 R KEGG: mms:mma_3330 hypothetical protein; hypothetical protein complement(1529340..1530113) Rhizobium leguminosarum bv. trifolii WSM1325 8012631 YP_002975379.1 CDS Rleg_1551 NC_012850.1 1530362 1531195 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ppw:PputW619_0231 two component LuxR family transcriptional regulator; response regulator receiver protein complement(1530362..1531195) Rhizobium leguminosarum bv. trifolii WSM1325 8012632 YP_002975380.1 CDS Rleg_1552 NC_012850.1 1531565 1532554 D PFAM: alpha/beta hydrolase fold; KEGG: met:M446_1520 alpha/beta hydrolase fold; alpha/beta hydrolase 1531565..1532554 Rhizobium leguminosarum bv. trifolii WSM1325 8015573 YP_002975381.1 CDS Rleg_1553 NC_012850.1 1532635 1533603 D PFAM: beta-lactamase; KEGG: bja:blr7067 cyclase; beta-lactamase 1532635..1533603 Rhizobium leguminosarum bv. trifolii WSM1325 8012633 YP_002975382.1 CDS Rleg_1554 NC_012850.1 1533634 1534263 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mlo:mll3525 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1533634..1534263 Rhizobium leguminosarum bv. trifolii WSM1325 8012634 YP_002975383.1 CDS Rleg_1555 NC_012850.1 1534286 1534750 D PFAM: protein of unknown function DUF1348; KEGG: mrd:Mrad2831_4684 hypothetical protein; hypothetical protein 1534286..1534750 Rhizobium leguminosarum bv. trifolii WSM1325 8015574 YP_002975384.1 CDS Rleg_1556 NC_012850.1 1534846 1536306 R PFAM: peptidase C14 caspase catalytic subunit p20; SMART: peptidase C14, caspase precursor p45, core; KEGG: xau:Xaut_0773 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(1534846..1536306) Rhizobium leguminosarum bv. trifolii WSM1325 8012635 YP_002975385.1 CDS Rleg_1557 NC_012850.1 1536628 1538949 R KEGG: smd:Smed_5524 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1536628..1538949) Rhizobium leguminosarum bv. trifolii WSM1325 8015575 YP_002975386.1 CDS Rleg_1558 NC_012850.1 1539124 1539516 D PFAM: protein of unknown function DUF983; KEGG: smd:Smed_1973 protein of unknown function DUF983; hypothetical protein 1539124..1539516 Rhizobium leguminosarum bv. trifolii WSM1325 8012636 YP_002975387.1 CDS Rleg_1559 NC_012850.1 1539529 1539963 D PFAM: protein of unknown function DUF302; KEGG: bav:BAV3286 exported protein; hypothetical protein 1539529..1539963 Rhizobium leguminosarum bv. trifolii WSM1325 8012637 YP_002975388.1 CDS Rleg_1560 NC_012850.1 1539980 1540735 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0813 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1539980..1540735 Rhizobium leguminosarum bv. trifolii WSM1325 8012638 YP_002975389.1 CDS Rleg_1561 NC_012850.1 1540852 1541820 D PFAM: alpha/beta hydrolase fold; KEGG: cak:Caul_0299 alpha/beta hydrolase fold; alpha/beta hydrolase 1540852..1541820 Rhizobium leguminosarum bv. trifolii WSM1325 8012639 YP_002975390.1 CDS Rleg_1562 NC_012850.1 1541984 1542730 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_1098 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1541984..1542730 Rhizobium leguminosarum bv. trifolii WSM1325 8012640 YP_002975391.1 CDS Rleg_1563 NC_012850.1 1542891 1548359 D KEGG: bpy:Bphyt_2428 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; serine/threonine protein kinase; PAC repeat-containing protein; multi-sensor signal transduction multi-kinase 1542891..1548359 Rhizobium leguminosarum bv. trifolii WSM1325 8012641 YP_002975392.1 CDS Rleg_1564 NC_012850.1 1548536 1549411 D PFAM: beta-lactamase; KEGG: mpo:Mpop_4163 beta-lactamase; beta-lactamase 1548536..1549411 Rhizobium leguminosarum bv. trifolii WSM1325 8012642 YP_002975393.1 CDS Rleg_1565 NC_012850.1 1549711 1550334 D KEGG: rec:RHECIAT_CH0003341 hypothetical protein; hypothetical protein 1549711..1550334 Rhizobium leguminosarum bv. trifolii WSM1325 8012643 YP_002975394.1 CDS Rleg_1566 NC_012850.1 1550331 1552208 D PFAM: AAA ATPase; peptidase M41; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003340 ATP-dependent hydrolase protein; ATPase AAA 1550331..1552208 Rhizobium leguminosarum bv. trifolii WSM1325 8012644 YP_002975395.1 CDS Rleg_1567 NC_012850.1 1552205 1552507 D hypothetical protein 1552205..1552507 Rhizobium leguminosarum bv. trifolii WSM1325 8012645 YP_002975396.1 CDS Rleg_1568 NC_012850.1 1552497 1554485 R TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: rec:RHECIAT_CH0003314 DNA-cytosine methyltransferase protein; DNA-cytosine methyltransferase complement(1552497..1554485) Rhizobium leguminosarum bv. trifolii WSM1325 8012646 YP_002975397.1 CDS Rleg_1569 NC_012850.1 1554653 1556023 D PFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 1554653..1556023 Rhizobium leguminosarum bv. trifolii WSM1325 8012647 YP_002975398.1 CDS Rleg_1570 NC_012850.1 1556210 1556788 R hypothetical protein complement(1556210..1556788) Rhizobium leguminosarum bv. trifolii WSM1325 8012648 YP_002975399.1 CDS Rleg_1571 NC_012850.1 1556841 1558526 R KEGG: sme:SMa2012 hypothetical protein; hypothetical protein complement(1556841..1558526) Rhizobium leguminosarum bv. trifolii WSM1325 8012649 YP_002975400.1 CDS Rleg_1572 NC_012850.1 1558941 1561859 R PFAM: UvrD/REP helicase; DNA topoisomerase type IA zn finger domain protein; KEGG: rsq:Rsph17025_1822 UvrD/REP helicase; UvrD/REP helicase complement(1558941..1561859) Rhizobium leguminosarum bv. trifolii WSM1325 8012650 YP_002975401.1 CDS Rleg_1573 NC_012850.1 1562147 1563823 R KEGG: oan:Oant_4527 hypothetical protein; hypothetical protein complement(1562147..1563823) Rhizobium leguminosarum bv. trifolii WSM1325 8012651 YP_002975402.1 CDS Rleg_1575 NC_012850.1 1564210 1565556 D KEGG: mag:amb3763 transposase; hypothetical protein 1564210..1565556 Rhizobium leguminosarum bv. trifolii WSM1325 8012652 YP_002975403.1 CDS Rleg_1576 NC_012850.1 1565602 1566618 R hypothetical protein complement(1565602..1566618) Rhizobium leguminosarum bv. trifolii WSM1325 8012653 YP_002975404.1 CDS Rleg_1577 NC_012850.1 1566646 1567080 R KEGG: smd:Smed_1216 metallophosphoesterase; metallophosphoesterase complement(1566646..1567080) Rhizobium leguminosarum bv. trifolii WSM1325 8012654 YP_002975405.1 CDS Rleg_1578 NC_012850.1 1567189 1567284 R hypothetical protein complement(1567189..1567284) Rhizobium leguminosarum bv. trifolii WSM1325 8012655 YP_002975406.1 CDS Rleg_1579 NC_012850.1 1567406 1567615 D hypothetical protein 1567406..1567615 Rhizobium leguminosarum bv. trifolii WSM1325 8012656 YP_002975407.1 CDS Rleg_1580 NC_012850.1 1567612 1570068 D PFAM: SMC domain protein; KEGG: bja:bll1930 hypothetical protein; SMC domain-containing protein 1567612..1570068 Rhizobium leguminosarum bv. trifolii WSM1325 8012657 YP_002975408.1 CDS Rleg_1581 NC_012850.1 1570110 1571168 R PFAM: peptidase C24 Calicivirus polyprotein ORF 1; KEGG: rpd:RPD_2286 hypothetical protein; peptidase C24 Calicivirus polyprotein ORF 1 complement(1570110..1571168) Rhizobium leguminosarum bv. trifolii WSM1325 8012658 YP_002975409.1 CDS Rleg_1582 NC_012850.1 1571493 1572290 R PFAM: metallophosphoesterase; KEGG: smd:Smed_1216 metallophosphoesterase; metallophosphoesterase complement(1571493..1572290) Rhizobium leguminosarum bv. trifolii WSM1325 8012659 YP_002975410.1 CDS Rleg_1583 NC_012850.1 1572474 1573067 D hypothetical protein 1572474..1573067 Rhizobium leguminosarum bv. trifolii WSM1325 8012660 YP_002975411.1 CDS Rleg_1584 NC_012850.1 1573134 1573811 D KEGG: psa:PST_3923 predicted non-heme iron hydroxylase MppO; hypothetical protein 1573134..1573811 Rhizobium leguminosarum bv. trifolii WSM1325 8012661 YP_002975412.1 CDS Rleg_1585 NC_012850.1 1573796 1574749 D hypothetical protein 1573796..1574749 Rhizobium leguminosarum bv. trifolii WSM1325 8015577 YP_002975413.1 CDS Rleg_1586 NC_012850.1 1574911 1575531 R KEGG: bja:blr0073 hypothetical protein; hypothetical protein complement(1574911..1575531) Rhizobium leguminosarum bv. trifolii WSM1325 8015578 YP_002975414.1 CDS Rleg_1587 NC_012850.1 1575598 1576845 R KEGG: bja:blr0072 hypothetical protein; hypothetical protein complement(1575598..1576845) Rhizobium leguminosarum bv. trifolii WSM1325 8012662 YP_002975415.1 CDS Rleg_1588 NC_012850.1 1576856 1578049 R KEGG: bja:blr0074 hypothetical protein; hypothetical protein complement(1576856..1578049) Rhizobium leguminosarum bv. trifolii WSM1325 8012663 YP_002975416.1 CDS Rleg_1589 NC_012850.1 1578417 1582232 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(1578417..1582232) Rhizobium leguminosarum bv. trifolii WSM1325 8012664 YP_002975417.1 CDS Rleg_1590 NC_012850.1 1582822 1583382 R KEGG: vco:VC0395_0102 hypothetical protein; hypothetical protein complement(1582822..1583382) Rhizobium leguminosarum bv. trifolii WSM1325 8012665 YP_002975418.1 CDS Rleg_1591 NC_012850.1 1583607 1584101 R catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase complement(1583607..1584101) Rhizobium leguminosarum bv. trifolii WSM1325 8012666 YP_002975419.1 CDS Rleg_1592 NC_012850.1 1584282 1585124 R PFAM: UspA domain protein; KEGG: rec:RHECIAT_CH0001841 probable universal stress protein; UspA domain-containing protein complement(1584282..1585124) Rhizobium leguminosarum bv. trifolii WSM1325 8012667 YP_002975420.1 CDS Rleg_1593 NC_012850.1 1585232 1586008 R PFAM: molybdopterin binding domain; KEGG: ret:RHE_CH01756 competence-damage associated protein (nucleotide-utilizing enzyme related tomolybdopterin-biosynthesis enzyme MoeA); molybdopterin binding domain-containing protein complement(1585232..1586008) Rhizobium leguminosarum bv. trifolii WSM1325 8015579 YP_002975421.1 CDS Rleg_1594 NC_012850.1 1586293 1586889 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 1586293..1586889 Rhizobium leguminosarum bv. trifolii WSM1325 8012668 YP_002975422.1 CDS Rleg_1595 NC_012850.1 1587318 1587449 D hypothetical protein 1587318..1587449 Rhizobium leguminosarum bv. trifolii WSM1325 8012670 YP_002975423.1 CDS Rleg_1596 NC_012850.1 1587460 1587996 R PFAM: VanZ family protein; KEGG: ret:RHE_CH01758 hypothetical protein; VanZ family protein complement(1587460..1587996) Rhizobium leguminosarum bv. trifolii WSM1325 8012671 YP_002975424.1 CDS Rleg_1597 NC_012850.1 1588032 1589282 D catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 1588032..1589282 Rhizobium leguminosarum bv. trifolii WSM1325 8012672 YP_002975425.1 CDS Rleg_1598 NC_012850.1 1589320 1589646 D KEGG: ret:RHE_CH01760 hypothetical protein; hypothetical protein 1589320..1589646 Rhizobium leguminosarum bv. trifolii WSM1325 8012673 YP_002975426.1 CDS Rleg_1599 NC_012850.1 1589881 1591152 D KEGG: rec:RHECIAT_CH0001848 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1589881..1591152 Rhizobium leguminosarum bv. trifolii WSM1325 8012674 YP_002975427.1 CDS Rleg_1600 NC_012850.1 1591350 1592579 D PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0001849 major facilitator family transporter protein; major facilitator superfamily protein 1591350..1592579 Rhizobium leguminosarum bv. trifolii WSM1325 8012675 YP_002975428.1 CDS Rleg_1601 NC_012850.1 1592638 1593414 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_CH0001850 3-oxoacyl-[acyl-carrier-protein] reductase protein; short-chain dehydrogenase/reductase SDR complement(1592638..1593414) Rhizobium leguminosarum bv. trifolii WSM1325 8012676 YP_002975429.1 CDS Rleg_1602 NC_012850.1 1593523 1594098 D PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0001851 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 1593523..1594098 Rhizobium leguminosarum bv. trifolii WSM1325 8015580 YP_002975430.1 CDS Rleg_1603 NC_012850.1 1594147 1594761 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ret:RHE_CH01764 [acyl-carrier-protein] phosphodiesterase protein; NAD(P)H dehydrogenase (quinone) complement(1594147..1594761) Rhizobium leguminosarum bv. trifolii WSM1325 8015581 YP_002975431.1 CDS Rleg_1604 NC_012850.1 1594901 1595869 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0001853 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 1594901..1595869 Rhizobium leguminosarum bv. trifolii WSM1325 8012677 YP_002975432.1 CDS cpdB NC_012850.1 1595912 1597900 R periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein complement(1595912..1597900) Rhizobium leguminosarum bv. trifolii WSM1325 8012678 YP_002975433.1 CDS Rleg_1606 NC_012850.1 1597977 1598204 D hypothetical protein 1597977..1598204 Rhizobium leguminosarum bv. trifolii WSM1325 8012679 YP_002975434.1 CDS Rleg_1607 NC_012850.1 1598155 1598559 R PFAM: type IV pilus assembly PilZ; KEGG: rec:RHECIAT_CH0001855 hypothetical protein; type IV pilus assembly PilZ complement(1598155..1598559) Rhizobium leguminosarum bv. trifolii WSM1325 8012680 YP_002975435.1 CDS Rleg_1608 NC_012850.1 1598644 1599525 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0001856 hypothetical conserved membrane protein; hypothetical protein complement(1598644..1599525) Rhizobium leguminosarum bv. trifolii WSM1325 8012681 YP_002975436.1 CDS Rleg_1609 NC_012850.1 1599705 1600166 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_CH0001857 leucine-responsive transcriptional regulator protein, AsnC family; AsnC family transcriptional regulator complement(1599705..1600166) Rhizobium leguminosarum bv. trifolii WSM1325 8012682 YP_002975437.1 CDS Rleg_1610 NC_012850.1 1600323 1601441 D KEGG: rec:RHECIAT_CH0001858 alanine dehydrogenase protein; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 1600323..1601441 Rhizobium leguminosarum bv. trifolii WSM1325 8012683 YP_002975438.1 CDS Rleg_1611 NC_012850.1 1601458 1601961 R PFAM: protein of unknown function DUF1203; KEGG: ret:RHE_CH01771 hypothetical protein; hypothetical protein complement(1601458..1601961) Rhizobium leguminosarum bv. trifolii WSM1325 8012684 YP_002975439.1 CDS Rleg_1612 NC_012850.1 1602354 1603121 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rec:RHECIAT_PC0000208 methyltransferase protein; type 11 methyltransferase 1602354..1603121 Rhizobium leguminosarum bv. trifolii WSM1325 8012685 YP_002975440.1 CDS Rleg_1613 NC_012850.1 1603262 1603429 D hypothetical protein 1603262..1603429 Rhizobium leguminosarum bv. trifolii WSM1325 8012686 YP_002975441.1 CDS Rleg_1614 NC_012850.1 1603461 1604021 R KEGG: rec:RHECIAT_CH0001860 acetyltransferase protein; acetyltransferase complement(1603461..1604021) Rhizobium leguminosarum bv. trifolii WSM1325 8012687 YP_002975442.1 CDS Rleg_1615 NC_012850.1 1604027 1604896 R PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: ret:RHE_CH01773 thiosulfate sulfurtransferase protein; rhodanese domain-containing protein complement(1604027..1604896) Rhizobium leguminosarum bv. trifolii WSM1325 8015582 YP_002975443.1 CDS Rleg_1616 NC_012850.1 1604915 1605652 R PFAM: threonyl/alanyl tRNA synthetase SAD; KEGG: rec:RHECIAT_CH0001862 alanyl-tRNA synthetase protein; threonyl/alanyl tRNA synthetase SAD complement(1604915..1605652) Rhizobium leguminosarum bv. trifolii WSM1325 8012688 YP_002975444.1 CDS Rleg_1617 NC_012850.1 1605659 1606696 R CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A complement(1605659..1606696) Rhizobium leguminosarum bv. trifolii WSM1325 8012689 YP_002975445.1 CDS Rleg_1618 NC_012850.1 1606938 1607582 D TIGRFAM: anti-sigma factor, , ChrR family; KEGG: rec:RHECIAT_CH0001864 anti-sigma factor transcriptional activator protein; anti-ECF sigma factor ChrR 1606938..1607582 Rhizobium leguminosarum bv. trifolii WSM1325 8012690 YP_002975446.1 CDS Rleg_1619 NC_012850.1 1607681 1608514 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0001865 short-chain dehydrogenase/oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1607681..1608514 Rhizobium leguminosarum bv. trifolii WSM1325 8012691 YP_002975447.1 CDS Rleg_1620 NC_012850.1 1608515 1609774 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase type 11; methyltransferase type 12; KEGG: rec:RHECIAT_CH0001866 cyclopropane-fatty-acyl-phospholipid synthase protein; cyclopropane-fatty-acyl-phospholipid synthase complement(1608515..1609774) Rhizobium leguminosarum bv. trifolii WSM1325 8012692 YP_002975448.1 CDS Rleg_1621 NC_012850.1 1609872 1610723 R PFAM: protein of unknown function DUF1365; KEGG: rec:RHECIAT_CH0001867 hypothetical protein; hypothetical protein complement(1609872..1610723) Rhizobium leguminosarum bv. trifolii WSM1325 8012693 YP_002975449.1 CDS Rleg_1622 NC_012850.1 1610720 1612051 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rec:RHECIAT_CH0001868 amine oxidase protein; amine oxidase complement(1610720..1612051) Rhizobium leguminosarum bv. trifolii WSM1325 8012694 YP_002975450.1 CDS Rleg_1623 NC_012850.1 1612048 1613496 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rec:RHECIAT_CH0001869 deoxyribodipyrimidine photo-lyase protein; deoxyribodipyrimidine photo-lyase complement(1612048..1613496) Rhizobium leguminosarum bv. trifolii WSM1325 8012695 YP_002975451.1 CDS Rleg_1624 NC_012850.1 1613759 1614085 R KEGG: rec:RHECIAT_CH0001870 hypothetical protein; hypothetical protein complement(1613759..1614085) Rhizobium leguminosarum bv. trifolii WSM1325 8012696 YP_002975452.1 CDS Rleg_1625 NC_012850.1 1614296 1614613 D KEGG: atc:AGR_L_1503 hypothetical protein; hypothetical protein 1614296..1614613 Rhizobium leguminosarum bv. trifolii WSM1325 8012697 YP_002975453.1 CDS Rleg_1626 NC_012850.1 1614736 1615407 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH01779 haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 1614736..1615407 Rhizobium leguminosarum bv. trifolii WSM1325 8012698 YP_002975454.1 CDS Rleg_1627 NC_012850.1 1615437 1618094 R PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: ret:RHE_CH01780 nitrate reductase large subunit protein; molybdopterin oxidoreductase complement(1615437..1618094) Rhizobium leguminosarum bv. trifolii WSM1325 8012699 YP_002975455.1 CDS Rleg_1628 NC_012850.1 1618095 1618424 R TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rec:RHECIAT_CH0001873 nitrite reductase (NAD(P)H) protein, small subunit; nitrite reductase (NAD(P)H) small subunit complement(1618095..1618424) Rhizobium leguminosarum bv. trifolii WSM1325 8012700 YP_002975456.1 CDS Rleg_1629 NC_012850.1 1618435 1620885 R TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: rec:RHECIAT_CH0001874 nitrite reductase (NAD(P)H) protein, large subunit; nitrite reductase (NAD(P)H) large subunit complement(1618435..1620885) Rhizobium leguminosarum bv. trifolii WSM1325 8012701 YP_002975457.1 CDS Rleg_1630 NC_012850.1 1620903 1622171 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0001875 probable nitrate transporter protein; major facilitator superfamily protein complement(1620903..1622171) Rhizobium leguminosarum bv. trifolii WSM1325 8015583 YP_002975458.1 CDS Rleg_1631 NC_012850.1 1622650 1623924 R KEGG: rec:RHECIAT_CH0001876 nitrate ABC transporter, substrate-binding protein; nitrate ABC transporter, substrate-binding protein complement(1622650..1623924) Rhizobium leguminosarum bv. trifolii WSM1325 8012702 YP_002975459.1 CDS Rleg_1632 NC_012850.1 1623965 1624588 R PFAM: ANTAR domain protein; response regulator receiver; KEGG: ret:RHE_CH01785 two-component response regulator protein; response regulator receiver and ANTAR domain-containing protein complement(1623965..1624588) Rhizobium leguminosarum bv. trifolii WSM1325 8012703 YP_002975460.1 CDS Rleg_1633 NC_012850.1 1624687 1625316 R PFAM: glutathione S-transferase domain; KEGG: sit:TM1040_1931 glutathione S-transferase-like; glutathione S-transferase domain protein complement(1624687..1625316) Rhizobium leguminosarum bv. trifolii WSM1325 8012704 YP_002975461.1 CDS Rleg_1634 NC_012850.1 1625324 1625689 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: nolRch; transcriptional regulator protein (repressor of nodulation genes); ArsR family transcriptional regulator complement(1625324..1625689) Rhizobium leguminosarum bv. trifolii WSM1325 8012705 YP_002975462.1 CDS Rleg_1635 NC_012850.1 1625910 1626776 D KEGG: ABC transporter; ABC transporter 1625910..1626776 Rhizobium leguminosarum bv. trifolii WSM1325 8012706 YP_002975463.1 CDS Rleg_1636 NC_012850.1 1626791 1627921 D PFAM: Luciferase-like monooxygenase; KEGG: ssuD; alkanesulfonate monooxygenase protein; Alkanesulfonate monooxygenase 1626791..1627921 Rhizobium leguminosarum bv. trifolii WSM1325 8012707 YP_002975464.1 CDS Rleg_1637 NC_012850.1 1627946 1629778 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: atc:AGR_L_3113 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 1627946..1629778 Rhizobium leguminosarum bv. trifolii WSM1325 8012708 YP_002975465.1 CDS Rleg_1638 NC_012850.1 1629792 1630790 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: atc:AGR_L_3114 hypothetical protein; TRAP dicarboxylate transporter- DctP subunit 1629792..1630790 Rhizobium leguminosarum bv. trifolii WSM1325 8012709 YP_002975466.1 CDS Rleg_1639 NC_012850.1 1631084 1631743 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rec:RHECIAT_CH0001879 peroxidase protein; peroxidase 1631084..1631743 Rhizobium leguminosarum bv. trifolii WSM1325 8012710 YP_002975467.1 CDS Rleg_1641 NC_012850.1 1632825 1633547 R PFAM: glutathione S-transferase domain; KEGG: swi:Swit_1664 glutathione S-transferase domain-containing protein; glutathione S-transferase domain protein complement(1632825..1633547) Rhizobium leguminosarum bv. trifolii WSM1325 8012712 YP_002975468.1 CDS Rleg_1642 NC_012850.1 1633769 1634725 D PFAM: Lytic transglycosylase catalytic; KEGG: rec:RHECIAT_CH0001880 probable glycosyltransferase protein; lytic transglycosylase 1633769..1634725 Rhizobium leguminosarum bv. trifolii WSM1325 8015584 YP_002975469.1 CDS Rleg_1643 NC_012850.1 1634821 1635774 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: rec:RHECIAT_CH0001881 hypothetical protein; NAD-dependent epimerase/dehydratase 1634821..1635774 Rhizobium leguminosarum bv. trifolii WSM1325 8015585 YP_002975470.1 CDS Rleg_1644 NC_012850.1 1635862 1637127 R PFAM: MOFRL domain protein; KEGG: ret:RHE_CH01794 hydroxypyruvate reductase protein; hydroxypyruvate reductase complement(1635862..1637127) Rhizobium leguminosarum bv. trifolii WSM1325 8012713 YP_002975471.1 CDS Rleg_1645 NC_012850.1 1637266 1638663 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dapE1; succinyl-diaminopimelate desuccinylase protein; hypothetical protein complement(1637266..1638663) Rhizobium leguminosarum bv. trifolii WSM1325 8012714 YP_002975472.1 CDS Rleg_1646 NC_012850.1 1638681 1639739 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: potA; spermidine/putrescine ABC transporter; ABC transporter complement(1638681..1639739) Rhizobium leguminosarum bv. trifolii WSM1325 8012715 YP_002975473.1 CDS Rleg_1647 NC_012850.1 1639747 1640535 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: potC; spermidine/putrescine ABC transporter; ABC transporter permease complement(1639747..1640535) Rhizobium leguminosarum bv. trifolii WSM1325 8012716 YP_002975474.1 CDS Rleg_1648 NC_012850.1 1640535 1641359 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: potB; spermidine/putrescine ABC transporter; ABC transporter permease complement(1640535..1641359) Rhizobium leguminosarum bv. trifolii WSM1325 8012717 YP_002975475.1 CDS Rleg_1649 NC_012850.1 1641491 1642531 R PFAM: extracellular solute-binding protein family 1; KEGG: potD; spermidine/putrescine ABC transporter; extracellular solute-binding protein complement(1641491..1642531) Rhizobium leguminosarum bv. trifolii WSM1325 8012718 YP_002975476.1 CDS Rleg_1650 NC_012850.1 1642756 1644681 D PFAM: amidohydrolase; KEGG: ade; adenine deaminase ; K01486 adenine deaminase; adenine deaminase 1642756..1644681 Rhizobium leguminosarum bv. trifolii WSM1325 8012719 YP_002975477.1 CDS Rleg_1651 NC_012850.1 1644791 1645090 D KEGG: ret:RHE_CH01795 hypothetical protein; hypothetical protein 1644791..1645090 Rhizobium leguminosarum bv. trifolii WSM1325 8012720 YP_002975478.1 CDS Rleg_1652 NC_012850.1 1645132 1645638 R KEGG: rpt:Rpal_2556 hypothetical protein; hypothetical protein complement(1645132..1645638) Rhizobium leguminosarum bv. trifolii WSM1325 8012721 YP_002975479.1 CDS Rleg_1653 NC_012850.1 1645635 1646255 R KEGG: rpa:RPA2311 hypothetical protein; hypothetical protein complement(1645635..1646255) Rhizobium leguminosarum bv. trifolii WSM1325 8012722 YP_002975480.1 CDS Rleg_1654 NC_012850.1 1646252 1646869 R KEGG: cff:CFF8240_1205 hypothetical protein; hypothetical protein complement(1646252..1646869) Rhizobium leguminosarum bv. trifolii WSM1325 8012723 YP_002975481.1 CDS Rleg_1655 NC_012850.1 1646866 1647624 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: pde:Pden_1170 ABC transporter; ABC transporter complement(1646866..1647624) Rhizobium leguminosarum bv. trifolii WSM1325 8012724 YP_002975482.1 CDS Rleg_1656 NC_012850.1 1647621 1648685 R PFAM: transport system permease protein; ABC transporter; KEGG: hmuU; hemin transport system ; K02015 iron complex transport system permease protein; ABC transporter permease complement(1647621..1648685) Rhizobium leguminosarum bv. trifolii WSM1325 8012725 YP_002975483.1 CDS Rleg_1657 NC_012850.1 1648690 1649793 R PFAM: periplasmic binding protein; KEGG: rpa:RPA2308 periplasmic iron siderophore binding protein of ABC transporter; periplasmic binding protein complement(1648690..1649793) Rhizobium leguminosarum bv. trifolii WSM1325 8012726 YP_002975484.1 CDS Rleg_1658 NC_012850.1 1649880 1650971 R TIGRFAM: esterase, PHB depolymerase family; KEGG: sme:SMa1961 polyhydroxybutyrate depolymerase; esterase, PHB depolymerase family complement(1649880..1650971) Rhizobium leguminosarum bv. trifolii WSM1325 8012727 YP_002975485.1 CDS Rleg_1659 NC_012850.1 1651205 1652251 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_2496 helix-turn-helix domain-containing protein; AraC family transcriptional regulator complement(1651205..1652251) Rhizobium leguminosarum bv. trifolii WSM1325 8012728 YP_002975486.1 CDS Rleg_1660 NC_012850.1 1652279 1653277 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_C1266 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 1652279..1653277 Rhizobium leguminosarum bv. trifolii WSM1325 8015586 YP_002975487.1 CDS Rleg_1661 NC_012850.1 1653379 1654128 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr5280 glucose dehydrogenase; short-chain dehydrogenase/reductase SDR 1653379..1654128 Rhizobium leguminosarum bv. trifolii WSM1325 8012729 YP_002975488.1 CDS Rleg_1662 NC_012850.1 1654327 1656444 R PFAM: Catalase domain protein; KEGG: smd:Smed_4123 catalase; catalase complement(1654327..1656444) Rhizobium leguminosarum bv. trifolii WSM1325 8012730 YP_002975489.1 CDS Rleg_1663 NC_012850.1 1656651 1657547 R KEGG: ret:RHE_CH01798 hypothetical protein; hypothetical protein complement(1656651..1657547) Rhizobium leguminosarum bv. trifolii WSM1325 8012731 YP_002975490.1 CDS Rleg_1664 NC_012850.1 1657633 1657809 D hypothetical protein 1657633..1657809 Rhizobium leguminosarum bv. trifolii WSM1325 8012732 YP_002975491.1 CDS Rleg_1665 NC_012850.1 1659718 1660026 D KEGG: ret:RHE_CH01805 hypothetical protein; hypothetical protein 1659718..1660026 Rhizobium leguminosarum bv. trifolii WSM1325 8012734 YP_002975492.1 CDS Rleg_1666 NC_012850.1 1660123 1660446 D KEGG: rec:RHECIAT_CH0001892 hypothetical protein; hypothetical protein 1660123..1660446 Rhizobium leguminosarum bv. trifolii WSM1325 8012735 YP_002975493.1 CDS Rleg_1667 NC_012850.1 1660443 1660781 R KEGG: ret:RHE_CH01807 hypothetical protein; hypothetical protein complement(1660443..1660781) Rhizobium leguminosarum bv. trifolii WSM1325 8012736 YP_002975494.1 CDS Rleg_1668 NC_012850.1 1661237 1661440 R hypothetical protein complement(1661237..1661440) Rhizobium leguminosarum bv. trifolii WSM1325 8012738 YP_002975495.1 CDS Rleg_1669 NC_012850.1 1661922 1662245 R hypothetical protein complement(1661922..1662245) Rhizobium leguminosarum bv. trifolii WSM1325 8012739 YP_002975496.1 CDS Rleg_1670 NC_012850.1 1662634 1662936 R hypothetical protein complement(1662634..1662936) Rhizobium leguminosarum bv. trifolii WSM1325 8012740 YP_002975497.1 CDS Rleg_1671 NC_012850.1 1663098 1663208 R hypothetical protein complement(1663098..1663208) Rhizobium leguminosarum bv. trifolii WSM1325 8015587 YP_002975498.1 CDS Rleg_1672 NC_012850.1 1663419 1664081 D PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: ret:RHE_CH01809 protein-L-isoaspartate O-methyltransferase protein; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1663419..1664081 Rhizobium leguminosarum bv. trifolii WSM1325 8012741 YP_002975499.1 CDS Rleg_1673 NC_012850.1 1664415 1665284 D KEGG: rec:RHECIAT_CH0001896 hypothetical protein; hypothetical protein 1664415..1665284 Rhizobium leguminosarum bv. trifolii WSM1325 8012742 YP_002975500.1 CDS valS NC_012850.1 1665401 1668244 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1665401..1668244 Rhizobium leguminosarum bv. trifolii WSM1325 8012743 YP_002975501.1 CDS Rleg_1675 NC_012850.1 1668642 1669916 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: rec:RHECIAT_CH0001898 probable outer membrane protein; aromatic hydrocarbon degradation membrane protein 1668642..1669916 Rhizobium leguminosarum bv. trifolii WSM1325 8012744 YP_002975502.1 CDS Rleg_1676 NC_012850.1 1670634 1671437 D SMART: Sel1 domain protein repeat-containing protein; KEGG: ret:RHE_CH00733 exopolysaccharide production negative regulator protein; Sel1 domain-containing protein repeat-containing protein 1670634..1671437 Rhizobium leguminosarum bv. trifolii WSM1325 8012745 YP_002975503.1 CDS Rleg_1677 NC_012850.1 1671454 1672245 R TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; KEGG: rec:RHECIAT_CH0001901 exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth complement(1671454..1672245) Rhizobium leguminosarum bv. trifolii WSM1325 8012746 YP_002975504.1 CDS Rleg_1678 NC_012850.1 1672371 1672703 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rec:RHECIAT_CH0001902 hypothetical protein; iron-sulfur cluster assembly accessory protein complement(1672371..1672703) Rhizobium leguminosarum bv. trifolii WSM1325 8012747 YP_002975505.1 CDS Rleg_1679 NC_012850.1 1672926 1674143 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1672926..1674143 Rhizobium leguminosarum bv. trifolii WSM1325 8012748 YP_002975506.1 CDS argS NC_012850.1 1674209 1675966 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1674209..1675966 Rhizobium leguminosarum bv. trifolii WSM1325 8012749 YP_002975507.1 CDS Rleg_1681 NC_012850.1 1676029 1679268 D PFAM: Sporulation domain protein; KEGG: rec:RHECIAT_CH0001905 hypothetical protein; Sporulation domain-containing protein 1676029..1679268 Rhizobium leguminosarum bv. trifolii WSM1325 8012750 YP_002975508.1 CDS Rleg_1682 NC_012850.1 1679394 1680407 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: rec:RHECIAT_CH0001906 probable beta-N-acetylhexosaminidase protein; beta-N-acetylhexosaminidase 1679394..1680407 Rhizobium leguminosarum bv. trifolii WSM1325 8015588 YP_002975509.1 CDS Rleg_1683 NC_012850.1 1680426 1681283 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: rec:RHECIAT_CH0001907 chromosome segregation and condensation protein A; chromosome segregation and condensation protein ScpA 1680426..1681283 Rhizobium leguminosarum bv. trifolii WSM1325 8012751 YP_002975510.1 CDS Rleg_1684 NC_012850.1 1681280 1681996 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rec:RHECIAT_CH0001908 chromosome segregation and condensation protein B; chromosome segregation and condensation protein ScpB 1681280..1681996 Rhizobium leguminosarum bv. trifolii WSM1325 8012752 YP_002975511.1 CDS tatA NC_012850.1 1682179 1682373 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 1682179..1682373 Rhizobium leguminosarum bv. trifolii WSM1325 8015589 YP_002975512.1 CDS Rleg_1686 NC_012850.1 1682425 1683036 D mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 1682425..1683036 Rhizobium leguminosarum bv. trifolii WSM1325 8012753 YP_002975513.1 CDS Rleg_1687 NC_012850.1 1683033 1683860 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rec:RHECIAT_CH0001911 sec-independent protein translocase protein; Sec-independent protein translocase subunit TatC 1683033..1683860 Rhizobium leguminosarum bv. trifolii WSM1325 8012754 YP_002975514.1 CDS Rleg_1688 NC_012850.1 1684060 1685343 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1684060..1685343 Rhizobium leguminosarum bv. trifolii WSM1325 8012755 YP_002975515.1 CDS surE NC_012850.1 1685348 1686121 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1685348..1686121 Rhizobium leguminosarum bv. trifolii WSM1325 8012756 YP_002975516.1 CDS pcm NC_012850.1 1686118 1686771 D catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 1686118..1686771 Rhizobium leguminosarum bv. trifolii WSM1325 8012757 YP_002975517.1 CDS Rleg_1691 NC_012850.1 1687013 1688617 D PFAM: peptidase M23; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: ret:RHE_CH01829 lipoprotein precursor protein; peptidase M23 1687013..1688617 Rhizobium leguminosarum bv. trifolii WSM1325 8012758 YP_002975518.1 CDS Rleg_1692 NC_012850.1 1688782 1689654 R PFAM: protein of unknown function DUF815; KEGG: ret:RHE_CH01830 hypothetical protein; SNP /replace=C; hypothetical protein complement(1688782..1689654) Rhizobium leguminosarum bv. trifolii WSM1325 8012759 YP_002975519.1 CDS Rleg_1693 NC_012850.1 1689861 1690208 D TIGRFAM: preprotein translocase subunit YajC; PFAM: YajC family protein; KEGG: ret:RHE_CH01831 preprotein tranlocase protein; preprotein translocase subunit YajC 1689861..1690208 Rhizobium leguminosarum bv. trifolii WSM1325 8012760 YP_002975520.1 CDS Rleg_1694 NC_012850.1 1690254 1692794 D part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 1690254..1692794 Rhizobium leguminosarum bv. trifolii WSM1325 8012761 YP_002975521.1 CDS Rleg_1695 NC_012850.1 1692799 1693185 D PFAM: protein of unknown function DUF498; KEGG: rec:RHECIAT_CH0001919 hypothetical protein; hypothetical protein 1692799..1693185 Rhizobium leguminosarum bv. trifolii WSM1325 8015590 YP_002975522.1 CDS Rleg_1696 NC_012850.1 1693188 1694045 D PFAM: Squalene/phytoene synthase; KEGG: rec:RHECIAT_CH0001920 phytoene synthase protein; squalene/phytoene synthase 1693188..1694045 Rhizobium leguminosarum bv. trifolii WSM1325 8012762 YP_002975523.1 CDS Rleg_1697 NC_012850.1 1694117 1694584 D KEGG: rec:RHECIAT_CH0001921 hypothetical protein; hypothetical protein 1694117..1694584 Rhizobium leguminosarum bv. trifolii WSM1325 8012763 YP_002975524.1 CDS Rleg_1698 NC_012850.1 1694692 1696125 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(1694692..1696125) Rhizobium leguminosarum bv. trifolii WSM1325 8012764 YP_002975525.1 CDS Rleg_1699 NC_012850.1 1696219 1696362 R PFAM: protein of unknown function DUF1127; KEGG: rec:RHECIAT_CH0001923 hypothetical protein; hypothetical protein complement(1696219..1696362) Rhizobium leguminosarum bv. trifolii WSM1325 8012765 YP_002975526.1 CDS Rleg_1700 NC_012850.1 1696657 1696803 R PFAM: protein of unknown function DUF1127; KEGG: rec:RHECIAT_CH0001924 hypothetical protein; hypothetical protein complement(1696657..1696803) Rhizobium leguminosarum bv. trifolii WSM1325 8012766 YP_002975527.1 CDS Rleg_1701 NC_012850.1 1697482 1698585 D KEGG: rec:RHECIAT_CH0001926 hypothetical conserved membrane protein; hypothetical protein 1697482..1698585 Rhizobium leguminosarum bv. trifolii WSM1325 8012767 YP_002975528.1 CDS Rleg_1702 NC_012850.1 1698582 1699172 D KEGG: rec:RHECIAT_CH0001927 hypothetical conserved membrane protein; hypothetical protein 1698582..1699172 Rhizobium leguminosarum bv. trifolii WSM1325 8012768 YP_002975529.1 CDS tig NC_012850.1 1699610 1701094 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1699610..1701094 Rhizobium leguminosarum bv. trifolii WSM1325 8012770 YP_002975530.1 CDS Rleg_1704 NC_012850.1 1701273 1701698 D KEGG: ret:RHE_CH01843 hypothetical protein; hypothetical protein 1701273..1701698 Rhizobium leguminosarum bv. trifolii WSM1325 8012771 YP_002975531.1 CDS Rleg_1705 NC_012850.1 1701826 1703595 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rec:RHECIAT_CH0001931 hypothetical protein; radical SAM protein complement(1701826..1703595) Rhizobium leguminosarum bv. trifolii WSM1325 8012772 YP_002975532.1 CDS Rleg_1707 NC_012850.1 1704625 1706034 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(1704625..1706034) Rhizobium leguminosarum bv. trifolii WSM1325 8012773 YP_002975533.1 CDS Rleg_1708 NC_012850.1 1706250 1707437 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rec:RHECIAT_CH0001934 L-lactate dehydrogenase (cytochrome) protein; L-lactate dehydrogenase (cytochrome) complement(1706250..1707437) Rhizobium leguminosarum bv. trifolii WSM1325 8012774 YP_002975534.1 CDS radC NC_012850.1 1707639 1708466 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(1707639..1708466) Rhizobium leguminosarum bv. trifolii WSM1325 8015592 YP_002975535.1 CDS Rleg_1710 NC_012850.1 1708474 1709310 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1708474..1709310) Rhizobium leguminosarum bv. trifolii WSM1325 8012775 YP_002975536.1 CDS Rleg_1711 NC_012850.1 1709559 1710218 D PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0001937 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 1709559..1710218 Rhizobium leguminosarum bv. trifolii WSM1325 8012776 YP_002975537.1 CDS Rleg_1712 NC_012850.1 1710349 1710522 D KEGG: rec:RHECIAT_CH0001938 hypothetical protein; hypothetical protein 1710349..1710522 Rhizobium leguminosarum bv. trifolii WSM1325 8015593 YP_002975538.1 CDS Rleg_1713 NC_012850.1 1710519 1710851 D KEGG: ret:RHE_CH01851 hypothetical protein; hypothetical protein 1710519..1710851 Rhizobium leguminosarum bv. trifolii WSM1325 8012777 YP_002975539.1 CDS Rleg_1714 NC_012850.1 1710788 1711282 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(1710788..1711282) Rhizobium leguminosarum bv. trifolii WSM1325 8012778 YP_002975540.1 CDS Rleg_1715 NC_012850.1 1711567 1712271 D catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase 1711567..1712271 Rhizobium leguminosarum bv. trifolii WSM1325 8012779 YP_002975541.1 CDS gatC NC_012850.1 1712341 1712628 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1712341..1712628 Rhizobium leguminosarum bv. trifolii WSM1325 8012780 YP_002975542.1 CDS gatA NC_012850.1 1712686 1714167 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1712686..1714167 Rhizobium leguminosarum bv. trifolii WSM1325 8012781 YP_002975543.1 CDS Rleg_1718 NC_012850.1 1714274 1714549 D KEGG: rec:RHECIAT_CH0001944 hypothetical protein; hypothetical protein 1714274..1714549 Rhizobium leguminosarum bv. trifolii WSM1325 8012782 YP_002975544.1 CDS Rleg_1719 NC_012850.1 1714595 1714852 R KEGG: rec:RHECIAT_CH0001945 hypothetical protein; hypothetical protein complement(1714595..1714852) Rhizobium leguminosarum bv. trifolii WSM1325 8012783 YP_002975545.1 CDS Rleg_1720 NC_012850.1 1715164 1715673 D PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH01860 acetyltransferase protein; N-acetyltransferase GCN5 1715164..1715673 Rhizobium leguminosarum bv. trifolii WSM1325 8012784 YP_002975546.1 CDS Rleg_1721 NC_012850.1 1715678 1715989 R PFAM: protein of unknown function DUF1294; KEGG: ret:RHE_CH01861 inner membrane protein; hypothetical protein complement(1715678..1715989) Rhizobium leguminosarum bv. trifolii WSM1325 8012785 YP_002975547.1 CDS gatB NC_012850.1 1716119 1717621 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1716119..1717621 Rhizobium leguminosarum bv. trifolii WSM1325 8012786 YP_002975548.1 CDS Rleg_1723 NC_012850.1 1717626 1718126 D PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH01863 acetyltransferase protein; N-acetyltransferase GCN5 1717626..1718126 Rhizobium leguminosarum bv. trifolii WSM1325 8012787 YP_002975549.1 CDS Rleg_1724 NC_012850.1 1718123 1718722 R hypothetical protein complement(1718123..1718722) Rhizobium leguminosarum bv. trifolii WSM1325 8012788 YP_002975550.1 CDS Rleg_1725 NC_012850.1 1718781 1719245 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0001950 acetyltransferase protein; N-acetyltransferase GCN5 1718781..1719245 Rhizobium leguminosarum bv. trifolii WSM1325 8012789 YP_002975551.1 CDS Rleg_1726 NC_012850.1 1719349 1719747 D Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 1719349..1719747 Rhizobium leguminosarum bv. trifolii WSM1325 8012790 YP_002975552.1 CDS Rleg_1727 NC_012850.1 1719862 1720302 D KEGG: rec:RHECIAT_CH0001952 hypothetical protein; hypothetical protein 1719862..1720302 Rhizobium leguminosarum bv. trifolii WSM1325 8012791 YP_002975553.1 CDS Rleg_1728 NC_012850.1 1720397 1721320 R KEGG: rec:RHECIAT_CH0001953 hypothetical protein; hypothetical protein complement(1720397..1721320) Rhizobium leguminosarum bv. trifolii WSM1325 8012792 YP_002975554.1 CDS aat NC_012850.1 1721396 1722010 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1721396..1722010) Rhizobium leguminosarum bv. trifolii WSM1325 8012793 YP_002975555.1 CDS Rleg_1730 NC_012850.1 1722018 1723367 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(1722018..1723367) Rhizobium leguminosarum bv. trifolii WSM1325 8015594 YP_002975556.1 CDS Rleg_1731 NC_012850.1 1723378 1723839 R composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(1723378..1723839) Rhizobium leguminosarum bv. trifolii WSM1325 8012794 YP_002975557.1 CDS Rleg_1732 NC_012850.1 1723860 1724297 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(1723860..1724297) Rhizobium leguminosarum bv. trifolii WSM1325 8012795 YP_002975558.1 CDS Rleg_1733 NC_012850.1 1724459 1725217 R PFAM: DSBA oxidoreductase; KEGG: rec:RHECIAT_CH0001958 probable outer membrane protein; DSBA oxidoreductase complement(1724459..1725217) Rhizobium leguminosarum bv. trifolii WSM1325 8015595 YP_002975559.1 CDS Rleg_1734 NC_012850.1 1725429 1726586 D PFAM: aminotransferase class I and II; KEGG: rec:RHECIAT_CH0001959 aspartate transaminase protein; class I and II aminotransferase 1725429..1726586 Rhizobium leguminosarum bv. trifolii WSM1325 8012796 YP_002975560.1 CDS Rleg_1735 NC_012850.1 1726615 1727955 R KEGG: ret:RHE_CH01874 hypothetical protein; hypothetical protein complement(1726615..1727955) Rhizobium leguminosarum bv. trifolii WSM1325 8012797 YP_002975561.1 CDS Rleg_1736 NC_012850.1 1728162 1730042 R TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0001961 poly-beta-hydroxybutyrate polymerase protein; poly(R)-hydroxyalkanoic acid synthase complement(1728162..1730042) Rhizobium leguminosarum bv. trifolii WSM1325 8012798 YP_002975562.1 CDS Rleg_1737 NC_012850.1 1730148 1730561 D KEGG: rec:RHECIAT_CH0001962 hypothetical protein; hypothetical protein 1730148..1730561 Rhizobium leguminosarum bv. trifolii WSM1325 8015596 YP_002975563.1 CDS Rleg_1738 NC_012850.1 1730783 1732000 D PFAM: aminotransferase class I and II; KEGG: rec:RHECIAT_CH0001963 succinyldiaminopimelate aminotransferase protein; aminotransferase 1730783..1732000 Rhizobium leguminosarum bv. trifolii WSM1325 8012799 YP_002975564.1 CDS Rleg_1739 NC_012850.1 1732062 1733387 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1732062..1733387 Rhizobium leguminosarum bv. trifolii WSM1325 8012800 YP_002975565.1 CDS Rleg_1740 NC_012850.1 1733548 1733793 D KEGG: rec:RHECIAT_CH0001965 hypothetical protein; hypothetical protein 1733548..1733793 Rhizobium leguminosarum bv. trifolii WSM1325 8012801 YP_002975566.1 CDS Rleg_1741 NC_012850.1 1733874 1735676 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rec:RHECIAT_CH0001966 single-stranded-DNA-specific exonuclease protein; single-stranded-DNA-specific exonuclease RecJ 1733874..1735676 Rhizobium leguminosarum bv. trifolii WSM1325 8012802 YP_002975567.1 CDS Rleg_1742 NC_012850.1 1736478 1737548 R PFAM: peptidase M15A; protein of unknown function DUF882; KEGG: rec:RHECIAT_CH0001970 hypothetical protein; peptidase M15A complement(1736478..1737548) Rhizobium leguminosarum bv. trifolii WSM1325 8012806 YP_002975568.1 CDS Rleg_1743 NC_012850.1 1737715 1738155 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0001971 lactoylglutathione lyase methylglyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(1737715..1738155) Rhizobium leguminosarum bv. trifolii WSM1325 8012807 YP_002975569.1 CDS Rleg_1744 NC_012850.1 1738351 1738929 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ret:RHE_CH01885 cold shock protein; cold-shock protein 1738351..1738929 Rhizobium leguminosarum bv. trifolii WSM1325 8012808 YP_002975570.1 CDS Rleg_1745 NC_012850.1 1738932 1739420 D PFAM: protein of unknown function DUF192; KEGG: rec:RHECIAT_CH0001973 hypothetical protein; hypothetical protein 1738932..1739420 Rhizobium leguminosarum bv. trifolii WSM1325 8012809 YP_002975571.1 CDS Rleg_1746 NC_012850.1 1739721 1739834 R hypothetical protein complement(1739721..1739834) Rhizobium leguminosarum bv. trifolii WSM1325 8012811 YP_002975572.1 CDS Rleg_1747 NC_012850.1 1740182 1740487 D PFAM: ETC complex I subunit conserved region; KEGG: ret:RHE_CH01888 NADH-ubiquinone oxidoreductase protein; ETC complex I subunit 1740182..1740487 Rhizobium leguminosarum bv. trifolii WSM1325 8015597 YP_002975573.1 CDS Rleg_1748 NC_012850.1 1741420 1743699 R PFAM: Hemolysin-type calcium-binding region; KEGG: ret:RHE_CH01892 RTX toxin hemolysin-type calcium-binding protein; hemolysin-type calcium-binding protein complement(1741420..1743699) Rhizobium leguminosarum bv. trifolii WSM1325 8012813 YP_002975574.1 CDS Rleg_1750 NC_012850.1 1745216 1745671 R KEGG: rec:RHECIAT_CH0000408 hypothetical protein; hypothetical protein complement(1745216..1745671) Rhizobium leguminosarum bv. trifolii WSM1325 8012815 YP_002975575.1 CDS Rleg_1751 NC_012850.1 1745752 1746084 R KEGG: hypothetical protein; hypothetical protein complement(1745752..1746084) Rhizobium leguminosarum bv. trifolii WSM1325 8015598 YP_002975576.1 CDS Rleg_1752 NC_012850.1 1746376 1746639 R PFAM: protein of unknown function DUF982; KEGG: hypothetical protein; hypothetical protein complement(1746376..1746639) Rhizobium leguminosarum bv. trifolii WSM1325 8015599 YP_002975577.1 CDS Rleg_1753 NC_012850.1 1747072 1747251 D KEGG: rec:RHECIAT_CH0002760 hypothetical protein; hypothetical protein 1747072..1747251 Rhizobium leguminosarum bv. trifolii WSM1325 8012816 YP_002975578.1 CDS Rleg_1754 NC_012850.1 1747368 1747679 R KEGG: rec:RHECIAT_CH0001983 hypothetical protein; hypothetical protein complement(1747368..1747679) Rhizobium leguminosarum bv. trifolii WSM1325 8012817 YP_002975579.1 CDS Rleg_1755 NC_012850.1 1747842 1748291 R KEGG: rec:RHECIAT_CH0001984 hypothetical protein; hypothetical protein complement(1747842..1748291) Rhizobium leguminosarum bv. trifolii WSM1325 8012818 YP_002975580.1 CDS Rleg_1756 NC_012850.1 1748796 1749446 D KEGG: rec:RHECIAT_CH0001986 hypothetical protein; hypothetical protein 1748796..1749446 Rhizobium leguminosarum bv. trifolii WSM1325 8012819 YP_002975581.1 CDS Rleg_1757 NC_012850.1 1749505 1750278 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001987 general L-amino acid ABC transporter, ATP-binding protein; ABC transporter complement(1749505..1750278) Rhizobium leguminosarum bv. trifolii WSM1325 8012820 YP_002975582.1 CDS Rleg_1758 NC_012850.1 1750314 1751468 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0001988 general L-amino acid ABC transporter, permease protein; SNP /replace=C; polar amino acid ABC transcriptional regulator inner membrane protein complement(1750314..1751468) Rhizobium leguminosarum bv. trifolii WSM1325 8012821 YP_002975583.1 CDS Rleg_1759 NC_012850.1 1751470 1752672 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0001989 general L-amino acid ABC transporter, permease protein; polar amino acid ABC transcriptional regulator inner membrane protein complement(1751470..1752672) Rhizobium leguminosarum bv. trifolii WSM1325 8012822 YP_002975584.1 CDS Rleg_1760 NC_012850.1 1752776 1753801 R KEGG: rec:RHECIAT_CH0001990 general L-amino acid ABC transporter, substrate-binding protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic-binding protein complement(1752776..1753801) Rhizobium leguminosarum bv. trifolii WSM1325 8012823 YP_002975585.1 CDS Rleg_1761 NC_012850.1 1754163 1755353 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1754163..1755353 Rhizobium leguminosarum bv. trifolii WSM1325 8012824 YP_002975586.1 CDS Rleg_1762 NC_012850.1 1755385 1756539 R PFAM: monooxygenase FAD-binding; KEGG: ret:RHE_CH01900 salicylate hydroxylase protein; monooxygenase FAD-binding complement(1755385..1756539) Rhizobium leguminosarum bv. trifolii WSM1325 8012825 YP_002975587.1 CDS Rleg_1763 NC_012850.1 1756567 1756812 R KEGG: rec:RHECIAT_CH0001994 hypothetical protein; hypothetical protein complement(1756567..1756812) Rhizobium leguminosarum bv. trifolii WSM1325 8012826 YP_002975588.1 CDS Rleg_1764 NC_012850.1 1756958 1757743 D PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH01902 hydrolase protein; alpha/beta hydrolase 1756958..1757743 Rhizobium leguminosarum bv. trifolii WSM1325 8012827 YP_002975589.1 CDS Rleg_1765 NC_012850.1 1757872 1758705 D KEGG: rec:RHECIAT_CH0001996 serine acetyltransferase protein; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein; transferase hexapeptide repeat containing protein; serine O-acetyltransferase 1757872..1758705 Rhizobium leguminosarum bv. trifolii WSM1325 8012828 YP_002975590.1 CDS Rleg_1766 NC_012850.1 1758846 1759049 D KEGG: rec:RHECIAT_CH0001997 hypothetical protein; hypothetical protein 1758846..1759049 Rhizobium leguminosarum bv. trifolii WSM1325 8012829 YP_002975591.1 CDS Rleg_1767 NC_012850.1 1759324 1759695 D TIGRFAM: phasin family protein; KEGG: rec:RHECIAT_CH0001998 hypothetical protein; phasin family protein 1759324..1759695 Rhizobium leguminosarum bv. trifolii WSM1325 8012830 YP_002975592.1 CDS clpS NC_012850.1 1759966 1760322 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1759966..1760322 Rhizobium leguminosarum bv. trifolii WSM1325 8015600 YP_002975593.1 CDS Rleg_1769 NC_012850.1 1760333 1762825 D KEGG: rec:RHECIAT_CH0002000 ATP-dependent Clp protease protein, ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1760333..1762825 Rhizobium leguminosarum bv. trifolii WSM1325 8012831 YP_002975594.1 CDS Rleg_1770 NC_012850.1 1762898 1763188 R PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mlo:mll5499 hypothetical protein; Stress responsive alpha-beta barrel domain protein complement(1762898..1763188) Rhizobium leguminosarum bv. trifolii WSM1325 8012832 YP_002975595.1 CDS Rleg_1771 NC_012850.1 1763246 1763677 R PFAM: histidine triad (HIT) protein; KEGG: ret:RHE_CH01908 HIT family hydrolase; histidine triad (HIT) protein complement(1763246..1763677) Rhizobium leguminosarum bv. trifolii WSM1325 8012833 YP_002975596.1 CDS Rleg_1772 NC_012850.1 1763732 1764922 R PFAM: protein of unknown function DUF482; KEGG: ret:RHE_CH01909 hypothetical protein; hypothetical protein complement(1763732..1764922) Rhizobium leguminosarum bv. trifolii WSM1325 8012834 YP_002975597.1 CDS Rleg_1773 NC_012850.1 1765100 1765819 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rec:RHECIAT_CH0002003 probable glycerophosphoryl diester phosphodiesterase protein; glycerophosphoryl diester phosphodiesterase complement(1765100..1765819) Rhizobium leguminosarum bv. trifolii WSM1325 8015601 YP_002975598.1 CDS Rleg_1774 NC_012850.1 1765816 1766286 R PFAM: endoribonuclease L-PSP; KEGG: ret:RHE_CH01911 translation initiation inhibitor protein; endoribonuclease L-PSP complement(1765816..1766286) Rhizobium leguminosarum bv. trifolii WSM1325 8012835 YP_002975599.1 CDS Rleg_1775 NC_012850.1 1766423 1767259 D PFAM: Domain of unknown function DUF1849; KEGG: rec:RHECIAT_CH0002005 hypothetical protein; hypothetical protein 1766423..1767259 Rhizobium leguminosarum bv. trifolii WSM1325 8012836 YP_002975600.1 CDS rpsB NC_012850.1 1767584 1768351 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1767584..1768351 Rhizobium leguminosarum bv. trifolii WSM1325 8012837 YP_002975601.1 CDS tsf NC_012850.1 1768593 1769519 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1768593..1769519 Rhizobium leguminosarum bv. trifolii WSM1325 8012838 YP_002975602.1 CDS pyrH NC_012850.1 1769616 1770338 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1769616..1770338 Rhizobium leguminosarum bv. trifolii WSM1325 8012839 YP_002975603.1 CDS frr NC_012850.1 1770503 1771063 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1770503..1771063 Rhizobium leguminosarum bv. trifolii WSM1325 8012840 YP_002975604.1 CDS Rleg_1780 NC_012850.1 1771101 1771844 D KEGG: rec:RHECIAT_CH0002014 undecaprenyl pyrophosphate synthetase protein; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase 1771101..1771844 Rhizobium leguminosarum bv. trifolii WSM1325 8012841 YP_002975605.1 CDS Rleg_1781 NC_012850.1 1771844 1772674 D PFAM: phosphatidate cytidylyltransferase; KEGG: ret:RHE_CH01918 phosphatidate cytidylyltransferase protein; phosphatidate cytidylyltransferase 1771844..1772674 Rhizobium leguminosarum bv. trifolii WSM1325 8012842 YP_002975606.1 CDS Rleg_1782 NC_012850.1 1772703 1773836 D KEGG: rec:RHECIAT_CH0002016 metallopeptidase protein; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 1772703..1773836 Rhizobium leguminosarum bv. trifolii WSM1325 8012843 YP_002975607.1 CDS Rleg_1783 NC_012850.1 1774027 1776369 D TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ret:RHE_CH01920 outer membrane lipoprotein; outer membrane protein assembly complex, YaeT protein 1774027..1776369 Rhizobium leguminosarum bv. trifolii WSM1325 8012844 YP_002975608.1 CDS lpxD NC_012850.1 1776420 1777484 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1776420..1777484 Rhizobium leguminosarum bv. trifolii WSM1325 8012845 YP_002975609.1 CDS fabZ NC_012850.1 1777477 1777944 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1777477..1777944 Rhizobium leguminosarum bv. trifolii WSM1325 8012846 YP_002975610.1 CDS Rleg_1786 NC_012850.1 1777941 1778759 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1777941..1778759 Rhizobium leguminosarum bv. trifolii WSM1325 8012847 YP_002975611.1 CDS Rleg_1787 NC_012850.1 1778763 1779644 D PFAM: protein of unknown function DUF1009; KEGG: ret:RHE_CH01924 hypothetical protein; hypothetical protein 1778763..1779644 Rhizobium leguminosarum bv. trifolii WSM1325 8012848 YP_002975612.1 CDS lpxB NC_012850.1 1779641 1780819 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1779641..1780819 Rhizobium leguminosarum bv. trifolii WSM1325 8012849 YP_002975613.1 CDS gltA NC_012850.1 1780852 1782141 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(1780852..1782141) Rhizobium leguminosarum bv. trifolii WSM1325 8012850 YP_002975614.1 CDS Rleg_1790 NC_012850.1 1782599 1784863 D TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: rec:RHECIAT_CH0002024 hypothetical protein; ComEC/Rec2-like protein 1782599..1784863 Rhizobium leguminosarum bv. trifolii WSM1325 8012851 YP_002975615.1 CDS Rleg_1791 NC_012850.1 1784844 1785563 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1784844..1785563) Rhizobium leguminosarum bv. trifolii WSM1325 8015602 YP_002975616.1 CDS Rleg_1792 NC_012850.1 1785762 1786658 D KEGG: ret:RHE_CH01929 hypothetical protein; hypothetical protein 1785762..1786658 Rhizobium leguminosarum bv. trifolii WSM1325 8015603 YP_002975617.1 CDS Rleg_1793 NC_012850.1 1786655 1787500 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1786655..1787500 Rhizobium leguminosarum bv. trifolii WSM1325 8012852 YP_002975618.1 CDS eno NC_012850.1 1787638 1788912 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1787638..1788912 Rhizobium leguminosarum bv. trifolii WSM1325 8012853 YP_002975619.1 CDS Rleg_1795 NC_012850.1 1789050 1789370 D PFAM: Septum formation initiator; KEGG: ret:RHE_CH01932 septum formation initiator protein; septum formation initiator 1789050..1789370 Rhizobium leguminosarum bv. trifolii WSM1325 8012854 YP_002975620.1 CDS Rleg_1796 NC_012850.1 1789516 1790562 D TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; KEGG: rec:RHECIAT_CH0002030 pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 1789516..1790562 Rhizobium leguminosarum bv. trifolii WSM1325 8012855 YP_002975621.1 CDS Rleg_1797 NC_012850.1 1790578 1791969 D catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1790578..1791969 Rhizobium leguminosarum bv. trifolii WSM1325 8015604 YP_002975622.1 CDS Rleg_1798 NC_012850.1 1791985 1793349 D TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: rec:RHECIAT_CH0002032 dihydrolipoamide S-acetyltransferase protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1791985..1793349 Rhizobium leguminosarum bv. trifolii WSM1325 8012856 YP_002975623.1 CDS Rleg_1799 NC_012850.1 1793369 1794010 D PFAM: lipolytic protein G-D-S-L family; KEGG: rec:RHECIAT_CH0002033 probable arylesterase protein; G-D-S-L family lipolytic protein 1793369..1794010 Rhizobium leguminosarum bv. trifolii WSM1325 8012857 YP_002975624.1 CDS Rleg_1800 NC_012850.1 1794013 1794594 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0002034 acetyltransferase protein; N-acetyltransferase GCN5 1794013..1794594 Rhizobium leguminosarum bv. trifolii WSM1325 8012858 YP_002975625.1 CDS Rleg_1801 NC_012850.1 1794611 1796059 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1794611..1796059 Rhizobium leguminosarum bv. trifolii WSM1325 8012859 YP_002975626.1 CDS Rleg_1802 NC_012850.1 1796158 1796412 D KEGG: ret:RHE_CH01939 hypothetical protein; hypothetical protein 1796158..1796412 Rhizobium leguminosarum bv. trifolii WSM1325 8012860 YP_002975627.1 CDS Rleg_1803 NC_012850.1 1796450 1796698 D PFAM: transglycosylase-associated protein; KEGG: rec:RHECIAT_CH0002037 transglycosylase-associated protein; transglycosylase-associated protein 1796450..1796698 Rhizobium leguminosarum bv. trifolii WSM1325 8012861 YP_002975628.1 CDS Rleg_1804 NC_012850.1 1796747 1797718 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1796747..1797718 Rhizobium leguminosarum bv. trifolii WSM1325 8012862 YP_002975629.1 CDS Rleg_1805 NC_012850.1 1797787 1798320 D KEGG: ret:RHE_CH01942 DNA topology modulation kinase FlaR-like protein; DNA topology modulation kinase FlaR-like protein 1797787..1798320 Rhizobium leguminosarum bv. trifolii WSM1325 8012863 YP_002975630.1 CDS Rleg_1806 NC_012850.1 1798361 1798957 D KEGG: DNA topology modulation kinase FlaR-like protein; DNA topology modulation kinase FlaR-like protein 1798361..1798957 Rhizobium leguminosarum bv. trifolii WSM1325 8012864 YP_002975631.1 CDS Rleg_1807 NC_012850.1 1798967 1799419 D PFAM: cyclase/dehydrase; KEGG: rec:RHECIAT_CH0002041 oligoketide cyclase/dehydrase protein; cyclase/dehydrase 1798967..1799419 Rhizobium leguminosarum bv. trifolii WSM1325 8012865 YP_002975632.1 CDS Rleg_1808 NC_012850.1 1799434 1799934 R PFAM: CinA domain protein; KEGG: rec:RHECIAT_CH0002042 competence-damage inducible protein (nucleotide-utilizing enzyme); CinA domain-containing protein complement(1799434..1799934) Rhizobium leguminosarum bv. trifolii WSM1325 8012866 YP_002975633.1 CDS ispDF NC_012850.1 1799934 1801151 R bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(1799934..1801151) Rhizobium leguminosarum bv. trifolii WSM1325 8012867 YP_002975634.1 CDS Rleg_1810 NC_012850.1 1801297 1802313 D TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; NADH:flavin oxidoreductase/NADH oxidase; KEGG: rec:RHECIAT_CH0002044 tRNA-dihydrouridine synthase protein; nifR3 family TIM-barrel protein 1801297..1802313 Rhizobium leguminosarum bv. trifolii WSM1325 8012868 YP_002975635.1 CDS Rleg_1811 NC_012850.1 1802310 1803464 D PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH01947 nitrogen regulation (two-component sensor histidine kinase) protein; signal transduction histidine kinase, nitrogen specific, NtrB 1802310..1803464 Rhizobium leguminosarum bv. trifolii WSM1325 8015605 YP_002975636.1 CDS Rleg_1812 NC_012850.1 1803461 1804912 D KEGG: rec:RHECIAT_CH0002046 two-component response regulator nitrogen regulation protein; TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; Fis family nitrogen metabolism transcriptional regulator NtrC 1803461..1804912 Rhizobium leguminosarum bv. trifolii WSM1325 8012869 YP_002975637.1 CDS Rleg_1813 NC_012850.1 1805518 1806507 D PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0002053 probable aldo/keto reductase protein (voltage-gated potassium channel beta subunit); aldo/keto reductase 1805518..1806507 Rhizobium leguminosarum bv. trifolii WSM1325 8012870 YP_002975638.1 CDS Rleg_1814 NC_012850.1 1806667 1806948 D hypothetical protein 1806667..1806948 Rhizobium leguminosarum bv. trifolii WSM1325 8012871 YP_002975639.1 CDS Rleg_1815 NC_012850.1 1806945 1807286 D hypothetical protein 1806945..1807286 Rhizobium leguminosarum bv. trifolii WSM1325 8012872 YP_002975640.1 CDS Rleg_1816 NC_012850.1 1807627 1809897 D KEGG: rec:RHECIAT_CH0002063 two-component sensor histidine kinase nitrogen regulation protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS/PAC sensor signal transduction histidine kinase 1807627..1809897 Rhizobium leguminosarum bv. trifolii WSM1325 8012873 YP_002975641.1 CDS Rleg_1817 NC_012850.1 1809887 1811251 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: rec:RHECIAT_CH0002064 two-component response regulator nitrogen regulation protein; Fis family transcriptional regulator 1809887..1811251 Rhizobium leguminosarum bv. trifolii WSM1325 8012874 YP_002975642.1 CDS Rleg_1818 NC_012850.1 1811316 1812179 D catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 1811316..1812179 Rhizobium leguminosarum bv. trifolii WSM1325 8012875 YP_002975643.1 CDS hfq NC_012850.1 1812292 1812534 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1812292..1812534 Rhizobium leguminosarum bv. trifolii WSM1325 8012876 YP_002975644.1 CDS Rleg_1820 NC_012850.1 1812612 1813937 D TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: ret:RHE_CH01955 GTP-binding protein; GTP-binding proten HflX 1812612..1813937 Rhizobium leguminosarum bv. trifolii WSM1325 8012877 YP_002975645.1 CDS mazG NC_012850.1 1814119 1814964 R functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase complement(1814119..1814964) Rhizobium leguminosarum bv. trifolii WSM1325 8015606 YP_002975646.1 CDS Rleg_1822 NC_012850.1 1815016 1815603 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rec:RHECIAT_CH0002069 guanine/cytosine deaminase protein; zinc-binding CMP/dCMP deaminase complement(1815016..1815603) Rhizobium leguminosarum bv. trifolii WSM1325 8012878 YP_002975647.1 CDS Rleg_1823 NC_012850.1 1815872 1817308 D KEGG: ret:RHE_CH01958 uroporphyrin-III C-methyltransferase protein; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase 1815872..1817308 Rhizobium leguminosarum bv. trifolii WSM1325 8012879 YP_002975648.1 CDS Rleg_1824 NC_012850.1 1817311 1817625 D KEGG: rec:RHECIAT_CH0002072 hypothetical protein; hypothetical protein 1817311..1817625 Rhizobium leguminosarum bv. trifolii WSM1325 8012880 YP_002975649.1 CDS Rleg_1825 NC_012850.1 1817634 1819304 D PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: ret:RHE_CH01960 sulfite reductase (NADPH) protein; sulfite reductase (ferredoxin) 1817634..1819304 Rhizobium leguminosarum bv. trifolii WSM1325 8012881 YP_002975650.1 CDS Rleg_1826 NC_012850.1 1819315 1819827 D PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0002074 hypothetical protein; hypothetical protein 1819315..1819827 Rhizobium leguminosarum bv. trifolii WSM1325 8012882 YP_002975651.1 CDS Rleg_1827 NC_012850.1 1819866 1821077 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: rec:RHECIAT_CH0002075 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase protein; 2-octaprenyl-6-methoxyphenyl hydroxylase 1819866..1821077 Rhizobium leguminosarum bv. trifolii WSM1325 8012883 YP_002975652.1 CDS Rleg_1828 NC_012850.1 1821045 1822007 R PFAM: Auxin Efflux Carrier; KEGG: rec:RHECIAT_CH0002076 malonate transporter protein; auxin efflux carrier family protein complement(1821045..1822007) Rhizobium leguminosarum bv. trifolii WSM1325 8012884 YP_002975653.1 CDS Rleg_1829 NC_012850.1 1822230 1823165 R PFAM: beta-lactamase; KEGG: atc:AGR_L_1113 hypothetical protein; beta-lactamase complement(1822230..1823165) Rhizobium leguminosarum bv. trifolii WSM1325 8012885 YP_002975654.1 CDS Rleg_1831 NC_012850.1 1823582 1824373 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH01048 3-oxoacyl-[acyl-carrier protein] reductase protein; short-chain dehydrogenase/reductase SDR complement(1823582..1824373) Rhizobium leguminosarum bv. trifolii WSM1325 8012887 YP_002975655.1 CDS Rleg_1832 NC_012850.1 1824486 1825214 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mlo:mlr2206 permease protein of amino acid ABC transporter; ABC transporter complement(1824486..1825214) Rhizobium leguminosarum bv. trifolii WSM1325 8012888 YP_002975656.1 CDS Rleg_1833 NC_012850.1 1825247 1825921 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr2204 permease protein of amino acid ABC transporter; polar amino acid ABC transcriptional regulator inner membrane protein complement(1825247..1825921) Rhizobium leguminosarum bv. trifolii WSM1325 8012889 YP_002975657.1 CDS Rleg_1834 NC_012850.1 1825918 1826595 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0237 amino acid ABC transporter permease; polar amino acid ABC transcriptional regulator inner membrane protein complement(1825918..1826595) Rhizobium leguminosarum bv. trifolii WSM1325 8012890 YP_002975658.1 CDS Rleg_1835 NC_012850.1 1826709 1827497 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mlo:mlr2201 binding protein component of amino acid ABC transporter; family 3 extracellular solute-binding protein complement(1826709..1827497) Rhizobium leguminosarum bv. trifolii WSM1325 8012891 YP_002975659.1 CDS Rleg_1836 NC_012850.1 1827590 1828753 R PFAM: saccharopine dehydrogenase; KEGG: mlo:mlr2199 lysine oxoglutarate reductase/saccharopine dehydrogenase; saccharopine dehydrogenase complement(1827590..1828753) Rhizobium leguminosarum bv. trifolii WSM1325 8012892 YP_002975660.1 CDS Rleg_1837 NC_012850.1 1828750 1829256 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: mlo:mlr2198 transcriptional regulator; AsnC family transcriptional regulator complement(1828750..1829256) Rhizobium leguminosarum bv. trifolii WSM1325 8012893 YP_002975661.1 CDS Rleg_1838 NC_012850.1 1829537 1830331 R PFAM: Ion transport 2 domain protein ; Ion transport protein; KEGG: sme:SM_b20361 ionic voltage-gated channel protein; Ion transport 2 domain-containing protein complement(1829537..1830331) Rhizobium leguminosarum bv. trifolii WSM1325 8012894 YP_002975662.1 CDS Rleg_1839 NC_012850.1 1830443 1831213 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0004013 3-oxoacyl-[acyl-carrier-protein] reductase protein; short-chain dehydrogenase/reductase SDR complement(1830443..1831213) Rhizobium leguminosarum bv. trifolii WSM1325 8012895 YP_002975663.1 CDS Rleg_1840 NC_012850.1 1831429 1832178 R PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: rec:RHECIAT_CH0002077 cytochrome C biogenesis protein; cytochrome C biogenesis protein transmembrane region complement(1831429..1832178) Rhizobium leguminosarum bv. trifolii WSM1325 8015607 YP_002975664.1 CDS Rleg_1841 NC_012850.1 1832637 1833101 D KEGG: shl:Shal_2177 hypothetical protein; hypothetical protein 1832637..1833101 Rhizobium leguminosarum bv. trifolii WSM1325 8012897 YP_002975665.1 CDS Rleg_1842 NC_012850.1 1833119 1833259 D hypothetical protein 1833119..1833259 Rhizobium leguminosarum bv. trifolii WSM1325 8015608 YP_002975666.1 CDS Rleg_1843 NC_012850.1 1833555 1834277 R hypothetical protein complement(1833555..1834277) Rhizobium leguminosarum bv. trifolii WSM1325 8012898 YP_002975667.1 CDS Rleg_1844 NC_012850.1 1834502 1834702 R KEGG: rec:RHECIAT_PC0000147 hypothetical protein; hypothetical protein complement(1834502..1834702) Rhizobium leguminosarum bv. trifolii WSM1325 8012899 YP_002975668.1 CDS Rleg_1845 NC_012850.1 1834829 1835023 R hypothetical protein complement(1834829..1835023) Rhizobium leguminosarum bv. trifolii WSM1325 8015609 YP_002975669.1 CDS Rleg_1846 NC_012850.1 1835292 1835519 D hypothetical protein 1835292..1835519 Rhizobium leguminosarum bv. trifolii WSM1325 8012900 YP_002975670.1 CDS Rleg_1847 NC_012850.1 1835689 1835892 D PFAM: CsbD family protein; KEGG: sme:SM_b21330 hypothetical protein; CsbD family protein 1835689..1835892 Rhizobium leguminosarum bv. trifolii WSM1325 8012901 YP_002975671.1 CDS Rleg_1848 NC_012850.1 1835972 1836199 R KEGG: rec:RHECIAT_CH0000675 hypothetical protein; hypothetical protein complement(1835972..1836199) Rhizobium leguminosarum bv. trifolii WSM1325 8012902 YP_002975672.1 CDS Rleg_1849 NC_012850.1 1836346 1836516 D KEGG: rec:RHECIAT_CH0002084 hypothetical protein; hypothetical protein 1836346..1836516 Rhizobium leguminosarum bv. trifolii WSM1325 8012903 YP_002975673.1 CDS Rleg_1850 NC_012850.1 1836856 1838349 D PFAM: monooxygenase FAD-binding; KEGG: ret:RHE_CH02023 hypothetical protein; hypothetical protein 1836856..1838349 Rhizobium leguminosarum bv. trifolii WSM1325 8012904 YP_002975674.1 CDS Rleg_1851 NC_012850.1 1838369 1839106 R KEGG: ret:RHE_CH02024 hypothetical protein; hypothetical protein complement(1838369..1839106) Rhizobium leguminosarum bv. trifolii WSM1325 8012905 YP_002975675.1 CDS Rleg_1853 NC_012850.1 1839828 1840052 R KEGG: rpe:RPE_0700 hypothetical protein; hypothetical protein complement(1839828..1840052) Rhizobium leguminosarum bv. trifolii WSM1325 8012907 YP_002975676.1 CDS Rleg_1854 NC_012850.1 1840917 1841207 D PFAM: protein of unknown function DUF982; KEGG: ret:RHE_CH02030 hypothetical protein; hypothetical protein 1840917..1841207 Rhizobium leguminosarum bv. trifolii WSM1325 8012908 YP_002975677.1 CDS Rleg_1855 NC_012850.1 1841390 1842217 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH02031 gualylate cyclase protein; adenylate/guanylate cyclase complement(1841390..1842217) Rhizobium leguminosarum bv. trifolii WSM1325 8012909 YP_002975678.1 CDS Rleg_1856 NC_012850.1 1842809 1843024 D PFAM: protein of unknown function DUF982; KEGG: ret:RHE_CH02032 hypothetical protein; hypothetical protein 1842809..1843024 Rhizobium leguminosarum bv. trifolii WSM1325 8012910 YP_002975679.1 CDS Rleg_1857 NC_012850.1 1843126 1843302 D KEGG: hypothetical protein; hypothetical protein 1843126..1843302 Rhizobium leguminosarum bv. trifolii WSM1325 8012911 YP_002975680.1 CDS Rleg_1858 NC_012850.1 1843302 1843553 D KEGG: ret:RHE_CH02033 hypothetical protein; hypothetical protein 1843302..1843553 Rhizobium leguminosarum bv. trifolii WSM1325 8012912 YP_002975681.1 CDS Rleg_1859 NC_012850.1 1843584 1844849 R PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_3045 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1843584..1844849) Rhizobium leguminosarum bv. trifolii WSM1325 8012913 YP_002975682.1 CDS Rleg_1860 NC_012850.1 1845015 1846511 R PFAM: monooxygenase FAD-binding; KEGG: ret:RHE_CH02034 hypothetical protein; hypothetical protein complement(1845015..1846511) Rhizobium leguminosarum bv. trifolii WSM1325 8012914 YP_002975683.1 CDS Rleg_1861 NC_012850.1 1846556 1847080 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_CH02035 MarR family transcriptional regulator; MarR family transcriptional regulator 1846556..1847080 Rhizobium leguminosarum bv. trifolii WSM1325 8012915 YP_002975684.1 CDS Rleg_1862 NC_012850.1 1847192 1847668 D KEGG: ret:RHE_CH02049 hypothetical protein; hypothetical protein 1847192..1847668 Rhizobium leguminosarum bv. trifolii WSM1325 8015610 YP_002975685.1 CDS Rleg_1863 NC_012850.1 1847908 1848549 R KEGG: rec:RHECIAT_CH0002097 hypothetical protein; hypothetical protein complement(1847908..1848549) Rhizobium leguminosarum bv. trifolii WSM1325 8012916 YP_002975686.1 CDS Rleg_1864 NC_012850.1 1848568 1849668 R PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0002098 dehydrogenase protein; oxidoreductase domain-containing protein complement(1848568..1849668) Rhizobium leguminosarum bv. trifolii WSM1325 8012917 YP_002975687.1 CDS Rleg_1865 NC_012850.1 1849714 1850913 R PFAM: ROK family protein; KEGG: rec:RHECIAT_CH0002099 probable transcriptional regulator protein, ROK family; ROK family protein complement(1849714..1850913) Rhizobium leguminosarum bv. trifolii WSM1325 8015611 YP_002975688.1 CDS Rleg_1866 NC_012850.1 1851115 1852419 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH02053 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 1851115..1852419 Rhizobium leguminosarum bv. trifolii WSM1325 8012918 YP_002975689.1 CDS Rleg_1867 NC_012850.1 1852501 1853439 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002101 probable sugar ABC transporter, permease protein; ABC transporter permease 1852501..1853439 Rhizobium leguminosarum bv. trifolii WSM1325 8012919 YP_002975690.1 CDS Rleg_1868 NC_012850.1 1853432 1854280 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02055 sugar ABC transporter, permease protein; ABC transporter permease 1853432..1854280 Rhizobium leguminosarum bv. trifolii WSM1325 8012920 YP_002975691.1 CDS Rleg_1869 NC_012850.1 1854304 1855377 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_CH02056 sugar ABC transporter, ATP-binding protein; ABC transporter 1854304..1855377 Rhizobium leguminosarum bv. trifolii WSM1325 8012921 YP_002975692.1 CDS Rleg_1870 NC_012850.1 1855553 1856242 R KEGG: rec:RHECIAT_CH0000568 hypothetical protein; hypothetical protein complement(1855553..1856242) Rhizobium leguminosarum bv. trifolii WSM1325 8012922 YP_002975693.1 CDS Rleg_1871 NC_012850.1 1856403 1857158 D KEGG: atu:Atu0796 peptidase; dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 1856403..1857158 Rhizobium leguminosarum bv. trifolii WSM1325 8012923 YP_002975694.1 CDS Rleg_1872 NC_012850.1 1857256 1857756 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rec:RHECIAT_CH0001144 glutathione-dependent formaldehyde-activating protein; glutathione-dependent formaldehyde-activating protein 1857256..1857756 Rhizobium leguminosarum bv. trifolii WSM1325 8012924 YP_002975695.1 CDS Rleg_1873 NC_012850.1 1857890 1858660 R KEGG: bid:Bind_3529 hypothetical protein; hypothetical protein complement(1857890..1858660) Rhizobium leguminosarum bv. trifolii WSM1325 8012925 YP_002975696.1 CDS Rleg_1875 NC_012850.1 1859980 1860903 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(1859980..1860903) Rhizobium leguminosarum bv. trifolii WSM1325 8012927 YP_002975697.1 CDS Rleg_1876 NC_012850.1 1860939 1861913 R PFAM: Mannonate dehydratase; KEGG: rec:RHECIAT_CH0002105 mannonate dehydratase protein; mannonate dehydratase complement(1860939..1861913) Rhizobium leguminosarum bv. trifolii WSM1325 8012928 YP_002975698.1 CDS Rleg_1877 NC_012850.1 1861981 1862691 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0002106 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator complement(1861981..1862691) Rhizobium leguminosarum bv. trifolii WSM1325 8012929 YP_002975699.1 CDS Rleg_1878 NC_012850.1 1862826 1864421 D PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_CH02060 dipeptide ABC transporter, substrate-binding protein; peptide ABC transporter substrate-binding protein 1862826..1864421 Rhizobium leguminosarum bv. trifolii WSM1325 8012930 YP_002975700.1 CDS Rleg_1879 NC_012850.1 1864442 1865470 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02061 dipeptide ABC transporter, permease protein; ABC transporter permease 1864442..1865470 Rhizobium leguminosarum bv. trifolii WSM1325 8012931 YP_002975701.1 CDS Rleg_1880 NC_012850.1 1865467 1866369 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02062 dipeptide ABC transporter, permease protein; ABC transporter permease 1865467..1866369 Rhizobium leguminosarum bv. trifolii WSM1325 8012932 YP_002975702.1 CDS Rleg_1881 NC_012850.1 1866356 1867201 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH02063 dipeptide ABC transporter, ATP-binding protein; ABC transporter 1866356..1867201 Rhizobium leguminosarum bv. trifolii WSM1325 8012933 YP_002975703.1 CDS Rleg_1882 NC_012850.1 1867198 1867941 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH02064 dipeptide ABC transporter, ATP-binding protein; ABC transporter 1867198..1867941 Rhizobium leguminosarum bv. trifolii WSM1325 8015612 YP_002975704.1 CDS Rleg_1883 NC_012850.1 1867964 1869016 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ret:RHE_CH02066 LacI family transcription regulator; LacI family transcriptional regulator complement(1867964..1869016) Rhizobium leguminosarum bv. trifolii WSM1325 8012934 YP_002975705.1 CDS Rleg_1884 NC_012850.1 1869261 1871783 D KEGG: ret:RHE_CH02067 hypothetical protein; hypothetical protein 1869261..1871783 Rhizobium leguminosarum bv. trifolii WSM1325 8012935 YP_002975706.1 CDS Rleg_1885 NC_012850.1 1871848 1873107 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH02068 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 1871848..1873107 Rhizobium leguminosarum bv. trifolii WSM1325 8015613 YP_002975707.1 CDS Rleg_1886 NC_012850.1 1873119 1874156 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02069 sugar ABC transporter, permease protein; ABC transporter permease 1873119..1874156 Rhizobium leguminosarum bv. trifolii WSM1325 8012936 YP_002975708.1 CDS Rleg_1887 NC_012850.1 1874153 1875202 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02070 sugar ABC transporter, permease protein; ABC transporter permease 1874153..1875202 Rhizobium leguminosarum bv. trifolii WSM1325 8012937 YP_002975709.1 CDS Rleg_1888 NC_012850.1 1875234 1876313 D PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002118 probable sugar ABC transporter, ATP-binding protein; ABC transporter 1875234..1876313 Rhizobium leguminosarum bv. trifolii WSM1325 8012938 YP_002975710.1 CDS Rleg_1889 NC_012850.1 1876428 1876607 R KEGG: rec:RHECIAT_CH0002119 hypothetical protein; hypothetical protein complement(1876428..1876607) Rhizobium leguminosarum bv. trifolii WSM1325 8012939 YP_002975711.1 CDS Rleg_1890 NC_012850.1 1876986 1877195 D KEGG: rec:RHECIAT_CH0002121 hypothetical protein; hypothetical protein 1876986..1877195 Rhizobium leguminosarum bv. trifolii WSM1325 8012940 YP_002975712.1 CDS Rleg_1891 NC_012850.1 1877204 1877578 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH02073 hypothetical protein; glutathione-dependent formaldehyde-activating protein 1877204..1877578 Rhizobium leguminosarum bv. trifolii WSM1325 8012941 YP_002975713.1 CDS Rleg_1892 NC_012850.1 1877741 1879033 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH02074 HlyD family protein secretion protein; RND family efflux transporter MFP subunit 1877741..1879033 Rhizobium leguminosarum bv. trifolii WSM1325 8012942 YP_002975714.1 CDS Rleg_1893 NC_012850.1 1879046 1879762 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH02075 ABC transporter, ATP-binding protein; ABC transporter 1879046..1879762 Rhizobium leguminosarum bv. trifolii WSM1325 8012943 YP_002975715.1 CDS Rleg_1894 NC_012850.1 1879752 1880954 D PFAM: protein of unknown function DUF214; KEGG: rec:RHECIAT_CH0002125 ABC transporter, permease protein; hypothetical protein 1879752..1880954 Rhizobium leguminosarum bv. trifolii WSM1325 8012944 YP_002975716.1 CDS Rleg_1895 NC_012850.1 1881028 1881387 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1881028..1881387 Rhizobium leguminosarum bv. trifolii WSM1325 8012945 YP_002975717.1 CDS Rleg_1896 NC_012850.1 1881610 1882224 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_CH02077 GntR family transcriptional regulator; GntR family transcriptional regulator 1881610..1882224 Rhizobium leguminosarum bv. trifolii WSM1325 8012946 YP_002975718.1 CDS Rleg_1897 NC_012850.1 1882274 1883086 R PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rec:RHECIAT_CH0002128 ferredoxin-NADP+ reductase protein; oxidoreductase FAD-binding domain-containing protein complement(1882274..1883086) Rhizobium leguminosarum bv. trifolii WSM1325 8012947 YP_002975719.1 CDS Rleg_1898 NC_012850.1 1883443 1884171 D KEGG: rec:RHECIAT_CH0002129 phosphatidylcholine synthase protein; phosphatidylcholine synthase 1883443..1884171 Rhizobium leguminosarum bv. trifolii WSM1325 8015614 YP_002975720.1 CDS Rleg_1899 NC_012850.1 1884182 1885162 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_CH0002130 quinone oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein 1884182..1885162 Rhizobium leguminosarum bv. trifolii WSM1325 8012948 YP_002975721.1 CDS Rleg_1900 NC_012850.1 1885202 1886770 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002131 probable ABC transporter, ATP-binding protein; ABC transporter 1885202..1886770 Rhizobium leguminosarum bv. trifolii WSM1325 8012949 YP_002975722.1 CDS Rleg_1901 NC_012850.1 1886760 1887845 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0002132 probable ABC transporter, permease protein; inner-membrane translocator 1886760..1887845 Rhizobium leguminosarum bv. trifolii WSM1325 8012950 YP_002975723.1 CDS Rleg_1902 NC_012850.1 1887842 1888762 D PFAM: inner-membrane translocator; KEGG: ret:RHE_CH02083 sugar ABC transporter, permease protein; inner-membrane translocator 1887842..1888762 Rhizobium leguminosarum bv. trifolii WSM1325 8015615 YP_002975724.1 CDS Rleg_1903 NC_012850.1 1888817 1889893 D PFAM: basic membrane lipoprotein; KEGG: rec:RHECIAT_CH0002134 ABC transporter, substrate-binding protein; basic membrane lipoprotein 1888817..1889893 Rhizobium leguminosarum bv. trifolii WSM1325 8012951 YP_002975725.1 CDS Rleg_1904 NC_012850.1 1890037 1890999 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rec:RHECIAT_CH0002135 probable sugar ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 1890037..1890999 Rhizobium leguminosarum bv. trifolii WSM1325 8012952 YP_002975726.1 CDS Rleg_1905 NC_012850.1 1891230 1892753 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH02086 sugar ABC transporter, ATP-binding protein; ABC transporter 1891230..1892753 Rhizobium leguminosarum bv. trifolii WSM1325 8012953 YP_002975727.1 CDS Rleg_1906 NC_012850.1 1892750 1893763 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0002137 probable sugar ABC transporter, permease protein; inner-membrane translocator 1892750..1893763 Rhizobium leguminosarum bv. trifolii WSM1325 8012954 YP_002975728.1 CDS Rleg_1907 NC_012850.1 1893760 1894728 D membrane component of a sugar ABC transporter system; inner membrane ABC transporter permease YjfF 1893760..1894728 Rhizobium leguminosarum bv. trifolii WSM1325 8012955 YP_002975729.1 CDS Rleg_1908 NC_012850.1 1894745 1895530 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_CH02089 GntR family transcriptional regulator; GntR family transcriptional regulator 1894745..1895530 Rhizobium leguminosarum bv. trifolii WSM1325 8015616 YP_002975730.1 CDS glmU NC_012850.1 1895696 1897057 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1895696..1897057 Rhizobium leguminosarum bv. trifolii WSM1325 8012956 YP_002975731.1 CDS Rleg_1910 NC_012850.1 1897167 1898993 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1897167..1898993 Rhizobium leguminosarum bv. trifolii WSM1325 8012957 YP_002975732.1 CDS Rleg_1911 NC_012850.1 1899129 1899836 D PFAM: protein of unknown function DUF502; KEGG: rec:RHECIAT_CH0002142 hypothetical protein; hypothetical protein 1899129..1899836 Rhizobium leguminosarum bv. trifolii WSM1325 8012958 YP_002975733.1 CDS Rleg_1912 NC_012850.1 1899918 1902023 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1899918..1902023) Rhizobium leguminosarum bv. trifolii WSM1325 8012959 YP_002975734.1 CDS Rleg_1913 NC_012850.1 1902115 1902420 D PFAM: protein of unknown function DUF339; KEGG: ret:RHE_CH02094 hypothetical protein; hypothetical protein 1902115..1902420 Rhizobium leguminosarum bv. trifolii WSM1325 8015617 YP_002975735.1 CDS Rleg_1914 NC_012850.1 1902417 1905917 D KEGG: ret:RHE_CH02095 transcription-repair coupling factor (TrcF) protein; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; DEAD/DEAH box helicase; TRCF domain protein; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 1902417..1905917 Rhizobium leguminosarum bv. trifolii WSM1325 8012960 YP_002975736.1 CDS Rleg_1915 NC_012850.1 1905982 1906449 D PFAM: OsmC family protein; KEGG: ret:RHE_CH02096 redox protein; OsmC family protein 1905982..1906449 Rhizobium leguminosarum bv. trifolii WSM1325 8015618 YP_002975737.1 CDS Rleg_1916 NC_012850.1 1906467 1907138 R PFAM: DSBA oxidoreductase; KEGG: ret:RHE_CH02098 dithiol-disulfide isomerase protein (involved in polyketide biosynthesis); DSBA oxidoreductase complement(1906467..1907138) Rhizobium leguminosarum bv. trifolii WSM1325 8012961 YP_002975738.1 CDS Rleg_1917 NC_012850.1 1907207 1909012 R PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_CH02099 peptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein complement(1907207..1909012) Rhizobium leguminosarum bv. trifolii WSM1325 8012962 YP_002975739.1 CDS Rleg_1918 NC_012850.1 1909301 1909960 D PFAM: Invasion associated locus B family protein; KEGG: rec:RHECIAT_CH0002151 invasion-associated protein; invasion associated locus B family protein 1909301..1909960 Rhizobium leguminosarum bv. trifolii WSM1325 8012963 YP_002975740.1 CDS Rleg_1919 NC_012850.1 1910075 1910404 R TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: ret:RHE_CH02101 hypothetical protein; hemimethylated DNA binding protein complement(1910075..1910404) Rhizobium leguminosarum bv. trifolii WSM1325 8012964 YP_002975741.1 CDS Rleg_1920 NC_012850.1 1910566 1911975 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rec:RHECIAT_CH0002153 glutamine synthetase protein; glutamine synthetase, type I complement(1910566..1911975) Rhizobium leguminosarum bv. trifolii WSM1325 8015619 YP_002975742.1 CDS Rleg_1921 NC_012850.1 1912054 1912392 R PFAM: nitrogen regulatory protein P-II; KEGG: rec:RHECIAT_CH0002154 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(1912054..1912392) Rhizobium leguminosarum bv. trifolii WSM1325 8012965 YP_002975743.1 CDS Rleg_1922 NC_012850.1 1912736 1914208 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: rec:RHECIAT_CH0002155 carbohydrate kinase protein; carbohydrate kinase 1912736..1914208 Rhizobium leguminosarum bv. trifolii WSM1325 8012966 YP_002975744.1 CDS Rleg_1923 NC_012850.1 1914560 1915576 D PFAM: protein of unknown function DUF808; KEGG: mch:Mchl_2082 protein of unknown function DUF808; hypothetical protein 1914560..1915576 Rhizobium leguminosarum bv. trifolii WSM1325 8012967 YP_002975745.1 CDS Rleg_1924 NC_012850.1 1915607 1916413 R PFAM: protein of unknown function DUF72; KEGG: ret:RHE_CH02105 hypothetical protein; hypothetical protein complement(1915607..1916413) Rhizobium leguminosarum bv. trifolii WSM1325 8012968 YP_002975746.1 CDS Rleg_1925 NC_012850.1 1916438 1916899 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02106 acetyltransferase protein; N-acetyltransferase GCN5 complement(1916438..1916899) Rhizobium leguminosarum bv. trifolii WSM1325 8015620 YP_002975747.1 CDS uvrA NC_012850.1 1916896 1919817 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(1916896..1919817) Rhizobium leguminosarum bv. trifolii WSM1325 8012969 YP_002975748.1 CDS Rleg_1927 NC_012850.1 1920102 1920611 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1920102..1920611 Rhizobium leguminosarum bv. trifolii WSM1325 8012970 YP_002975749.1 CDS Rleg_1928 NC_012850.1 1920740 1921285 D hypothetical protein 1920740..1921285 Rhizobium leguminosarum bv. trifolii WSM1325 8012971 YP_002975750.1 CDS Rleg_1929 NC_012850.1 1921308 1921955 R PFAM: multiple antibiotic resistance (MarC)-related protein; Integral membrane protein TerC; KEGG: ret:RHE_CH02109 multiple antibiotic resistance transporter protein; multiple antibiotic resistance (MarC)-like protein complement(1921308..1921955) Rhizobium leguminosarum bv. trifolii WSM1325 8012972 YP_002975751.1 CDS Rleg_1930 NC_012850.1 1922192 1925029 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1922192..1925029 Rhizobium leguminosarum bv. trifolii WSM1325 8012973 YP_002975752.1 CDS Rleg_1931 NC_012850.1 1925195 1925335 R KEGG: ret:RHE_CH02111 hypothetical protein; hypothetical protein complement(1925195..1925335) Rhizobium leguminosarum bv. trifolii WSM1325 8015621 YP_002975753.1 CDS Rleg_1932 NC_012850.1 1925366 1925521 R KEGG: rec:RHECIAT_CH0002163 hypothetical protein; hypothetical protein complement(1925366..1925521) Rhizobium leguminosarum bv. trifolii WSM1325 8012974 YP_002975754.1 CDS Rleg_1933 NC_012850.1 1925645 1925827 R KEGG: rec:RHECIAT_CH0002164 hypothetical protein; hypothetical protein complement(1925645..1925827) Rhizobium leguminosarum bv. trifolii WSM1325 8012975 YP_002975755.1 CDS coaD NC_012850.1 1926069 1926563 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1926069..1926563 Rhizobium leguminosarum bv. trifolii WSM1325 8015622 YP_002975756.1 CDS Rleg_1935 NC_012850.1 1926606 1927178 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rec:RHECIAT_CH0002166 peptidyl-prolyl cis-trans isomerase A signal peptide protein; cyclophilin type peptidyl-prolyl cis-trans isomerase 1926606..1927178 Rhizobium leguminosarum bv. trifolii WSM1325 8012976 YP_002975757.1 CDS Rleg_1936 NC_012850.1 1927208 1927717 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rec:RHECIAT_CH0002167 peptidyl-prolyl cis-trans isomerase B signal peptide protein; cyclophilin type peptidyl-prolyl cis-trans isomerase 1927208..1927717 Rhizobium leguminosarum bv. trifolii WSM1325 8015623 YP_002975758.1 CDS queA NC_012850.1 1927792 1928877 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1927792..1928877 Rhizobium leguminosarum bv. trifolii WSM1325 8012977 YP_002975759.1 CDS tgt NC_012850.1 1928874 1930004 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1928874..1930004 Rhizobium leguminosarum bv. trifolii WSM1325 8012978 YP_002975760.1 CDS Rleg_1939 NC_012850.1 1930007 1931032 R PFAM: acyltransferase; KEGG: ret:RHE_CH02118 acetyltransferase protein; acyltransferase complement(1930007..1931032) Rhizobium leguminosarum bv. trifolii WSM1325 8012979 YP_002975761.1 CDS Rleg_1940 NC_012850.1 1931202 1931630 R KEGG: ret:RHE_CH02119 hypothetical protein; hypothetical protein complement(1931202..1931630) Rhizobium leguminosarum bv. trifolii WSM1325 8012980 YP_002975762.1 CDS Rleg_1941 NC_012850.1 1931711 1932976 R FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II complement(1931711..1932976) Rhizobium leguminosarum bv. trifolii WSM1325 8012981 YP_002975763.1 CDS Rleg_1942 NC_012850.1 1932990 1933496 R PFAM: helix-turn-helix HxlR type; KEGG: ret:RHE_CH02121 transcriptional regulator protein; HxlR family transcriptional regulator complement(1932990..1933496) Rhizobium leguminosarum bv. trifolii WSM1325 8012982 YP_002975764.1 CDS Rleg_1943 NC_012850.1 1933538 1933840 R KEGG: rec:RHECIAT_CH0002182 hypothetical protein; hypothetical protein complement(1933538..1933840) Rhizobium leguminosarum bv. trifolii WSM1325 8012983 YP_002975765.1 CDS Rleg_1944 NC_012850.1 1933972 1935837 R KEGG: bja:bll2373 hypothetical protein; hypothetical protein complement(1933972..1935837) Rhizobium leguminosarum bv. trifolii WSM1325 8012984 YP_002975766.1 CDS Rleg_1945 NC_012850.1 1936094 1936786 D KEGG: sfu:Sfum_0359 alpha amylase, catalytic region; alpha amylase 1936094..1936786 Rhizobium leguminosarum bv. trifolii WSM1325 8012985 YP_002975767.1 CDS Rleg_1946 NC_012850.1 1936855 1937043 R KEGG: rec:RHECIAT_CH0002184 hypothetical protein; hypothetical protein complement(1936855..1937043) Rhizobium leguminosarum bv. trifolii WSM1325 8012986 YP_002975768.1 CDS Rleg_1947 NC_012850.1 1937188 1937490 R hypothetical protein complement(1937188..1937490) Rhizobium leguminosarum bv. trifolii WSM1325 8012987 YP_002975769.1 CDS Rleg_1948 NC_012850.1 1937646 1938041 D KEGG: rec:RHECIAT_CH0002185 hypothetical protein; hypothetical protein 1937646..1938041 Rhizobium leguminosarum bv. trifolii WSM1325 8015624 YP_002975770.1 CDS Rleg_1949 NC_012850.1 1938055 1938168 R hypothetical protein complement(1938055..1938168) Rhizobium leguminosarum bv. trifolii WSM1325 8012988 YP_002975771.1 CDS Rleg_1950 NC_012850.1 1938519 1941365 D PFAM: peptidase M16 domain protein; KEGG: rec:RHECIAT_CH0002192 probable peptidase/protease protein; peptidase M16 domain-containing protein 1938519..1941365 Rhizobium leguminosarum bv. trifolii WSM1325 8012989 YP_002975772.1 CDS Rleg_1951 NC_012850.1 1941379 1942062 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02133 GNAT family acetyltransferase; N-acetyltransferase GCN5 complement(1941379..1942062) Rhizobium leguminosarum bv. trifolii WSM1325 8012990 YP_002975773.1 CDS Rleg_1952 NC_012850.1 1942059 1942547 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_CH02134 MarR family transcriptional regulator; MarR family transcriptional regulator complement(1942059..1942547) Rhizobium leguminosarum bv. trifolii WSM1325 8012991 YP_002975774.1 CDS Rleg_1953 NC_012850.1 1942664 1943872 R PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_1275 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1942664..1943872) Rhizobium leguminosarum bv. trifolii WSM1325 8012992 YP_002975775.1 CDS Rleg_1954 NC_012850.1 1944071 1944982 D PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: speB2; agmatinase protein ; K01480 agmatinase; Arginase/agmatinase/formiminoglutamase 1944071..1944982 Rhizobium leguminosarum bv. trifolii WSM1325 8012993 YP_002975776.1 CDS Rleg_1955 NC_012850.1 1945137 1945796 R PFAM: protein of unknown function DUF205; KEGG: cak:Caul_3589 hypothetical protein; hypothetical protein complement(1945137..1945796) Rhizobium leguminosarum bv. trifolii WSM1325 8012994 YP_002975777.1 CDS Rleg_1956 NC_012850.1 1945955 1947463 D PFAM: transcriptional regulator domain protein; tetratricopeptide TPR_4; KEGG: ret:RHE_CH02136 adenylate cyclase; transcriptional regulator 1945955..1947463 Rhizobium leguminosarum bv. trifolii WSM1325 8012995 YP_002975778.1 CDS Rleg_1957 NC_012850.1 1947489 1948022 R PFAM: protein of unknown function DUF937; KEGG: ret:RHE_CH01088 hypothetical protein; hypothetical protein complement(1947489..1948022) Rhizobium leguminosarum bv. trifolii WSM1325 8012996 YP_002975779.1 CDS Rleg_1958 NC_012850.1 1948197 1948664 R KEGG: rec:RHECIAT_CH0001182 hypothetical protein; hypothetical protein complement(1948197..1948664) Rhizobium leguminosarum bv. trifolii WSM1325 8012997 YP_002975780.1 CDS Rleg_1959 NC_012850.1 1948705 1949385 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rec:RHECIAT_CH0002195 peroxiredoxin protein; alkyl hydroperoxide reductase complement(1948705..1949385) Rhizobium leguminosarum bv. trifolii WSM1325 8012998 YP_002975781.1 CDS Rleg_1960 NC_012850.1 1949460 1952702 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0002196 adenylate/guanylate cyclase protein; adenylate/guanylate cyclase complement(1949460..1952702) Rhizobium leguminosarum bv. trifolii WSM1325 8012999 YP_002975782.1 CDS Rleg_1961 NC_012850.1 1952907 1954613 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: ret:RHE_CH02790 acetolactate synthase 3 catalytic subunit; acetolactate synthase large subunit complement(1952907..1954613) Rhizobium leguminosarum bv. trifolii WSM1325 8013000 YP_002975783.1 CDS Rleg_1962 NC_012850.1 1954933 1955991 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ret:RHE_PF00218 ribose operon transcriptional regulator; LacI family transcriptional regulator complement(1954933..1955991) Rhizobium leguminosarum bv. trifolii WSM1325 8013001 YP_002975784.1 CDS Rleg_1963 NC_012850.1 1956375 1957337 D KEGG: ret:RHE_PF00217 sugar ABC transporter substrate-binding protein; sugar ABC transporter substrate-binding protein 1956375..1957337 Rhizobium leguminosarum bv. trifolii WSM1325 8013002 YP_002975785.1 CDS Rleg_1964 NC_012850.1 1957419 1958960 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004011 probable sugar ABC transporter, ATP-binding protein; ABC transporter 1957419..1958960 Rhizobium leguminosarum bv. trifolii WSM1325 8013003 YP_002975786.1 CDS Rleg_1965 NC_012850.1 1959002 1960027 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0004010 probable sugar ABC transporter, permease protein; inner-membrane translocator 1959002..1960027 Rhizobium leguminosarum bv. trifolii WSM1325 8013004 YP_002975787.1 CDS Rleg_1967 NC_012850.1 1960455 1961828 R PFAM: Integrase catalytic region; KEGG: smd:Smed_4886 integrase catalytic region; integrase catalytic subunit complement(1960455..1961828) Rhizobium leguminosarum bv. trifolii WSM1325 8013006 YP_002975788.1 CDS Rleg_1968 NC_012850.1 1962139 1962876 D KEGG: ret:RHE_PD00189 hypothetical protein; hypothetical protein 1962139..1962876 Rhizobium leguminosarum bv. trifolii WSM1325 8013007 YP_002975789.1 CDS Rleg_1969 NC_012850.1 1962883 1964307 R PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00190 insertion sequence transposase protein; integrase catalytic subunit complement(1962883..1964307) Rhizobium leguminosarum bv. trifolii WSM1325 8013008 YP_002975790.1 CDS Rleg_1970 NC_012850.1 1964671 1970232 R KEGG: rec:RHECIAT_CH0003310 superfamily I DNA and RNA helicase protein; superfamily I DNA and RNA helicase protein complement(1964671..1970232) Rhizobium leguminosarum bv. trifolii WSM1325 8013009 YP_002975791.1 CDS Rleg_1971 NC_012850.1 1970551 1972701 R PFAM: MscS Mechanosensitive ion channel; KEGG: ret:RHE_CH02151 mechanosensitive ion channel protein; mechanosensitive ion channel protein MscS complement(1970551..1972701) Rhizobium leguminosarum bv. trifolii WSM1325 8015625 YP_002975792.1 CDS Rleg_1973 NC_012850.1 1974218 1974661 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_0439 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1974218..1974661) Rhizobium leguminosarum bv. trifolii WSM1325 8013011 YP_002975793.1 CDS Rleg_1974 NC_012850.1 1974965 1975912 D PFAM: alpha/beta hydrolase fold; KEGG: reh:H16_B0901 predicted hydrolase or acyltransferase; alpha/beta hydrolase 1974965..1975912 Rhizobium leguminosarum bv. trifolii WSM1325 8013012 YP_002975794.1 CDS Rleg_1975 NC_012850.1 1975901 1976809 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_5569 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1975901..1976809) Rhizobium leguminosarum bv. trifolii WSM1325 8013013 YP_002975795.1 CDS Rleg_1976 NC_012850.1 1976915 1977607 R PFAM: protein of unknown function DUF599; KEGG: pzu:PHZ_c2989 hypothetical protein; hypothetical protein complement(1976915..1977607) Rhizobium leguminosarum bv. trifolii WSM1325 8015626 YP_002975796.1 CDS Rleg_1977 NC_012850.1 1977704 1978666 R KEGG: jan:Jann_2804 allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase-like protein complement(1977704..1978666) Rhizobium leguminosarum bv. trifolii WSM1325 8013014 YP_002975797.1 CDS Rleg_1978 NC_012850.1 1978663 1979370 R PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: bid:Bind_3141 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 complement(1978663..1979370) Rhizobium leguminosarum bv. trifolii WSM1325 8013015 YP_002975798.1 CDS Rleg_1979 NC_012850.1 1979372 1979482 R hypothetical protein complement(1979372..1979482) Rhizobium leguminosarum bv. trifolii WSM1325 8013016 YP_002975799.1 CDS Rleg_1980 NC_012850.1 1979482 1980261 R PFAM: LamB/YcsF family protein; KEGG: jan:Jann_2802 hypothetical protein; LamB/YcsF family protein complement(1979482..1980261) Rhizobium leguminosarum bv. trifolii WSM1325 8013017 YP_002975800.1 CDS Rleg_1981 NC_012850.1 1980270 1980389 R hypothetical protein complement(1980270..1980389) Rhizobium leguminosarum bv. trifolii WSM1325 8013018 YP_002975801.1 CDS Rleg_1982 NC_012850.1 1980560 1981084 D PFAM: PAS fold-3 domain protein; KEGG: atc:AGR_pAT_501 hypothetical protein; PAS fold-3 domain-containing protein 1980560..1981084 Rhizobium leguminosarum bv. trifolii WSM1325 8013019 YP_002975802.1 CDS Rleg_1983 NC_012850.1 1981168 1981989 R PFAM: UspA domain protein; KEGG: ret:RHE_PD00016 universal stress UspA protein; UspA domain-containing protein complement(1981168..1981989) Rhizobium leguminosarum bv. trifolii WSM1325 8015627 YP_002975803.1 CDS Rleg_1984 NC_012850.1 1982304 1983566 D KEGG: nha:Nham_1901 membrane protein; membrane protein 1982304..1983566 Rhizobium leguminosarum bv. trifolii WSM1325 8013020 YP_002975804.1 CDS Rleg_1985 NC_012850.1 1983624 1984001 R KEGG: ret:RHE_CH02152 hypothetical protein; hypothetical protein complement(1983624..1984001) Rhizobium leguminosarum bv. trifolii WSM1325 8013021 YP_002975805.1 CDS Rleg_1986 NC_012850.1 1984065 1984742 R KEGG: ret:RHE_CH02153 hypothetical protein; SNP /replace=A; hypothetical protein complement(1984065..1984742) Rhizobium leguminosarum bv. trifolii WSM1325 8013022 YP_002975806.1 CDS Rleg_1987 NC_012850.1 1985003 1985629 D PFAM: Integral membrane protein TerC; KEGG: ret:RHE_CH02154 TerC family transporter; integral membrane protein TerC 1985003..1985629 Rhizobium leguminosarum bv. trifolii WSM1325 8013023 YP_002975807.1 CDS Rleg_1988 NC_012850.1 1985619 1986443 R PFAM: beta-lactamase; KEGG: ret:RHE_CH02155 metal-dependent hydrolase protein; beta-lactamase complement(1985619..1986443) Rhizobium leguminosarum bv. trifolii WSM1325 8013024 YP_002975808.1 CDS Rleg_1989 NC_012850.1 1986448 1987230 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: deoxyribonuclease protein ; K03424 Mg-dependent DNase; TatD family hydrolase complement(1986448..1987230) Rhizobium leguminosarum bv. trifolii WSM1325 8013025 YP_002975809.1 CDS Rleg_1990 NC_012850.1 1987235 1988785 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1987235..1988785) Rhizobium leguminosarum bv. trifolii WSM1325 8013026 YP_002975810.1 CDS Rleg_1991 NC_012850.1 1989020 1989808 D PFAM: protein of unknown function DUF81; KEGG: rec:RHECIAT_CH0002243 hypothetical conserved membrane protein; hypothetical protein 1989020..1989808 Rhizobium leguminosarum bv. trifolii WSM1325 8013027 YP_002975811.1 CDS Rleg_1992 NC_012850.1 1989848 1990873 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(1989848..1990873) Rhizobium leguminosarum bv. trifolii WSM1325 8013028 YP_002975812.1 CDS Rleg_1993 NC_012850.1 1990882 1991592 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(1990882..1991592) Rhizobium leguminosarum bv. trifolii WSM1325 8013029 YP_002975813.1 CDS Rleg_1994 NC_012850.1 1991694 1992887 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rec:RHECIAT_CH0002246 D-alanyl-D-alanine carboxypeptidase protein; serine-type D-Ala-D-Ala carboxypeptidase complement(1991694..1992887) Rhizobium leguminosarum bv. trifolii WSM1325 8013030 YP_002975814.1 CDS Rleg_1995 NC_012850.1 1992959 1994053 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ret:RHE_CH02162 rare lipoprotein A precursor protein; rare lipoprotein A complement(1992959..1994053) Rhizobium leguminosarum bv. trifolii WSM1325 8013031 YP_002975815.1 CDS Rleg_1996 NC_012850.1 1994456 1994659 D hypothetical protein 1994456..1994659 Rhizobium leguminosarum bv. trifolii WSM1325 8013032 YP_002975816.1 CDS Rleg_1997 NC_012850.1 1994757 1995083 R PFAM: GYD family protein; KEGG: ret:RHE_CH03186 hypothetical protein; GYD family protein complement(1994757..1995083) Rhizobium leguminosarum bv. trifolii WSM1325 8013033 YP_002975817.1 CDS Rleg_1998 NC_012850.1 1995298 1996473 D KEGG: atc:AGR_C_3960 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1995298..1996473 Rhizobium leguminosarum bv. trifolii WSM1325 8013034 YP_002975818.1 CDS Rleg_1999 NC_012850.1 1996908 1997222 R KEGG: ret:RHE_CH01803 hypothetical protein; hypothetical protein complement(1996908..1997222) Rhizobium leguminosarum bv. trifolii WSM1325 8013036 YP_002975819.1 CDS Rleg_2000 NC_012850.1 1997351 1997662 D hypothetical protein 1997351..1997662 Rhizobium leguminosarum bv. trifolii WSM1325 8015628 YP_002975820.1 CDS Rleg_2001 NC_012850.1 1998095 1998820 D PFAM: protein of unknown function DUF849; KEGG: mlo:mll1845 hypothetical protein; hypothetical protein 1998095..1998820 Rhizobium leguminosarum bv. trifolii WSM1325 8013037 YP_002975821.1 CDS Rleg_2002 NC_012850.1 1998824 1998967 R hypothetical protein complement(1998824..1998967) Rhizobium leguminosarum bv. trifolii WSM1325 8013038 YP_002975822.1 CDS Rleg_2004 NC_012850.1 1999307 2000737 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0002252 transporter protein; major facilitator superfamily protein complement(1999307..2000737) Rhizobium leguminosarum bv. trifolii WSM1325 8013039 YP_002975823.1 CDS Rleg_2005 NC_012850.1 2000879 2001775 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002253 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 2000879..2001775 Rhizobium leguminosarum bv. trifolii WSM1325 8013040 YP_002975824.1 CDS Rleg_2006 NC_012850.1 2001877 2002098 D PFAM: PhnA protein; KEGG: rec:RHECIAT_CH0002254 alkilphosphonate uptake protein; PhnA protein 2001877..2002098 Rhizobium leguminosarum bv. trifolii WSM1325 8013041 YP_002975825.1 CDS Rleg_2007 NC_012850.1 2002153 2002980 R PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: ret:RHE_CH02168 transglutaminase-like protein; transglutaminase complement(2002153..2002980) Rhizobium leguminosarum bv. trifolii WSM1325 8013042 YP_002975826.1 CDS Rleg_2008 NC_012850.1 2003108 2003980 R PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: rec:RHECIAT_CH0002256 transglutaminase-like protein; transglutaminase complement(2003108..2003980) Rhizobium leguminosarum bv. trifolii WSM1325 8013043 YP_002975827.1 CDS Rleg_2009 NC_012850.1 2004160 2004276 D hypothetical protein 2004160..2004276 Rhizobium leguminosarum bv. trifolii WSM1325 8013044 YP_002975828.1 CDS Rleg_2010 NC_012850.1 2004474 2004629 R PFAM: Entericidin EcnAB; KEGG: ret:RHE_CH02170 hypothetical protein; entericidin EcnAB complement(2004474..2004629) Rhizobium leguminosarum bv. trifolii WSM1325 8015630 YP_002975829.1 CDS Rleg_2011 NC_012850.1 2004827 2004964 D hypothetical protein 2004827..2004964 Rhizobium leguminosarum bv. trifolii WSM1325 8013045 YP_002975830.1 CDS Rleg_2012 NC_012850.1 2005302 2005418 D hypothetical protein 2005302..2005418 Rhizobium leguminosarum bv. trifolii WSM1325 8013046 YP_002975831.1 CDS Rleg_2013 NC_012850.1 2005523 2005777 D PFAM: transglycosylase-associated protein; KEGG: rec:RHECIAT_CH0002258 hypothetical conserved membrane protein; transglycosylase-associated protein 2005523..2005777 Rhizobium leguminosarum bv. trifolii WSM1325 8015631 YP_002975832.1 CDS Rleg_2014 NC_012850.1 2005895 2006308 R KEGG: rec:RHECIAT_CH0002259 hypothetical protein; hypothetical protein complement(2005895..2006308) Rhizobium leguminosarum bv. trifolii WSM1325 8013047 YP_002975833.1 CDS Rleg_2015 NC_012850.1 2006396 2008288 D KEGG: rec:RHECIAT_CH0002260 peptidyl-prolyl cis-trans isomerase D signal peptide protein; peptidyl-prolyl cis-trans isomerase D signal peptide protein 2006396..2008288 Rhizobium leguminosarum bv. trifolii WSM1325 8013048 YP_002975834.1 CDS trpD NC_012850.1 2008297 2009313 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2008297..2009313 Rhizobium leguminosarum bv. trifolii WSM1325 8013049 YP_002975835.1 CDS trpC NC_012850.1 2009323 2010135 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase 2009323..2010135 Rhizobium leguminosarum bv. trifolii WSM1325 8013050 YP_002975836.1 CDS Rleg_2018 NC_012850.1 2010137 2010634 D TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: moaC; molybdenum cofactor biosynthesis protein C ; K03637 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 2010137..2010634 Rhizobium leguminosarum bv. trifolii WSM1325 8013051 YP_002975837.1 CDS Rleg_2019 NC_012850.1 2010631 2011854 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: rec:RHECIAT_CH0002264 molybdopterin biosynthesis protein; molybdenum cofactor synthesis domain-containing protein 2010631..2011854 Rhizobium leguminosarum bv. trifolii WSM1325 8013052 YP_002975838.1 CDS Rleg_2020 NC_012850.1 2011944 2012591 D hypothetical protein 2011944..2012591 Rhizobium leguminosarum bv. trifolii WSM1325 8013053 YP_002975839.1 CDS Rleg_2021 NC_012850.1 2012694 2013359 R PFAM: methyltransferase small; KEGG: ret:RHE_CH02178 SAM-dependent methyltransferease protein; methyltransferase small complement(2012694..2013359) Rhizobium leguminosarum bv. trifolii WSM1325 8013054 YP_002975840.1 CDS Rleg_2022 NC_012850.1 2013385 2013819 R PFAM: GCN5-related N-acetyltransferase; KEGG: pde:Pden_2843 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2013385..2013819) Rhizobium leguminosarum bv. trifolii WSM1325 8013055 YP_002975841.1 CDS Rleg_2023 NC_012850.1 2013885 2015840 R PFAM: DEAD/DEAH box helicase; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: ret:RHE_CH02179 ATP-dependent RNA helicase protein; DEAD/DEAH box helicase complement(2013885..2015840) Rhizobium leguminosarum bv. trifolii WSM1325 8013056 YP_002975842.1 CDS Rleg_2024 NC_012850.1 2015940 2017796 R PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH02180 adenylate cyclase protein; adenylate/guanylate cyclase complement(2015940..2017796) Rhizobium leguminosarum bv. trifolii WSM1325 8013057 YP_002975843.1 CDS Rleg_2025 NC_012850.1 2017802 2018320 R PFAM: FecR protein; KEGG: ret:RHE_CH02181 hypothetical protein; anti-FecI sigma factor FecR complement(2017802..2018320) Rhizobium leguminosarum bv. trifolii WSM1325 8013058 YP_002975844.1 CDS Rleg_2026 NC_012850.1 2018460 2019605 R PFAM: citrate synthase; KEGG: rec:RHECIAT_CH0002269 citrate synthase protein; citrate synthase complement(2018460..2019605) Rhizobium leguminosarum bv. trifolii WSM1325 8013059 YP_002975845.1 CDS Rleg_2027 NC_012850.1 2019689 2020777 D forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle; citrate synthase 2 2019689..2020777 Rhizobium leguminosarum bv. trifolii WSM1325 8013060 YP_002975846.1 CDS Rleg_2028 NC_012850.1 2020815 2021285 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_3391 Aha1 domain family protein; Activator of Hsp90 ATPase 1 family protein complement(2020815..2021285) Rhizobium leguminosarum bv. trifolii WSM1325 8013061 YP_002975847.1 CDS pyrG NC_012850.1 2021357 2022985 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2021357..2022985) Rhizobium leguminosarum bv. trifolii WSM1325 8013062 YP_002975848.1 CDS secG NC_012850.1 2023128 2023661 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rec:RHECIAT_CH0002272 probable protein-export translocase protein; preprotein translocase subunit SecG complement(2023128..2023661) Rhizobium leguminosarum bv. trifolii WSM1325 8015632 YP_002975849.1 CDS tpiA NC_012850.1 2023781 2024551 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(2023781..2024551) Rhizobium leguminosarum bv. trifolii WSM1325 8013063 YP_002975850.1 CDS Rleg_2032 NC_012850.1 2024739 2025638 R KEGG: rec:RHECIAT_CH0002274 hypothetical protein; hypothetical protein complement(2024739..2025638) Rhizobium leguminosarum bv. trifolii WSM1325 8013064 YP_002975851.1 CDS Rleg_2033 NC_012850.1 2025858 2027957 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2025858..2027957 Rhizobium leguminosarum bv. trifolii WSM1325 8015633 YP_002975852.1 CDS Rleg_2034 NC_012850.1 2028070 2029188 R PFAM: acyltransferase; KEGG: bja:blr2157 hypothetical protein; acyltransferase complement(2028070..2029188) Rhizobium leguminosarum bv. trifolii WSM1325 8013065 YP_002975853.1 CDS Rleg_2036 NC_012850.1 2029783 2030922 D KEGG: rec:RHECIAT_CH0002276 hypothetical protein; hypothetical protein 2029783..2030922 Rhizobium leguminosarum bv. trifolii WSM1325 8013067 YP_002975854.1 CDS Rleg_2037 NC_012850.1 2031039 2032256 D PFAM: protein of unknown function UPF0118; KEGG: ret:RHE_CH02189 permease protein; hypothetical protein 2031039..2032256 Rhizobium leguminosarum bv. trifolii WSM1325 8013068 YP_002975855.1 CDS Rleg_2038 NC_012850.1 2032276 2032734 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0002278 probable acetyltransferase protein; N-acetyltransferase GCN5 complement(2032276..2032734) Rhizobium leguminosarum bv. trifolii WSM1325 8013069 YP_002975856.1 CDS Rleg_2039 NC_012850.1 2032864 2033283 D KEGG: ret:RHE_CH02191 hypothetical protein; hypothetical protein 2032864..2033283 Rhizobium leguminosarum bv. trifolii WSM1325 8013070 YP_002975857.1 CDS Rleg_2040 NC_012850.1 2033280 2034422 R KEGG: rec:RHECIAT_CH0002280 hypothetical protein; hypothetical protein complement(2033280..2034422) Rhizobium leguminosarum bv. trifolii WSM1325 8013071 YP_002975858.1 CDS Rleg_2041 NC_012850.1 2034530 2035141 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rec:RHECIAT_CH0002281 hypothetical protein; flavin reductase domain-containing FMN-binding protein complement(2034530..2035141) Rhizobium leguminosarum bv. trifolii WSM1325 8013072 YP_002975859.1 CDS Rleg_2042 NC_012850.1 2035141 2035725 R PFAM: nitroreductase; KEGG: rec:RHECIAT_CH0002282 nitroreductase protein; nitroreductase complement(2035141..2035725) Rhizobium leguminosarum bv. trifolii WSM1325 8013073 YP_002975860.1 CDS Rleg_2043 NC_012850.1 2035839 2036939 D KEGG: rec:RHECIAT_CH0002283 hypothetical protein; hypothetical protein 2035839..2036939 Rhizobium leguminosarum bv. trifolii WSM1325 8013074 YP_002975861.1 CDS thrS NC_012850.1 2037176 2039161 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2037176..2039161) Rhizobium leguminosarum bv. trifolii WSM1325 8013075 YP_002975862.1 CDS Rleg_2045 NC_012850.1 2039314 2041911 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein complement(2039314..2041911) Rhizobium leguminosarum bv. trifolii WSM1325 8013076 YP_002975863.1 CDS Rleg_2046 NC_012850.1 2042030 2042557 R PFAM: protein of unknown function DUF1697; KEGG: rec:RHECIAT_CH0002286 hypothetical protein; hypothetical protein complement(2042030..2042557) Rhizobium leguminosarum bv. trifolii WSM1325 8013077 YP_002975864.1 CDS Rleg_2047 NC_012850.1 2042563 2042967 R PFAM: protein of unknown function DUF37; KEGG: rec:RHECIAT_CH0002287 hypothetical protein; hypothetical protein complement(2042563..2042967) Rhizobium leguminosarum bv. trifolii WSM1325 8015634 YP_002975865.1 CDS Rleg_2048 NC_012850.1 2042973 2043419 R PFAM: nitrogen-fixing NifU domain protein; KEGG: ret:RHE_CH02200 nitrogen fixation protein; nitrogen-fixing NifU domain-containing protein complement(2042973..2043419) Rhizobium leguminosarum bv. trifolii WSM1325 8013078 YP_002975866.1 CDS folE NC_012850.1 2043726 2044340 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2043726..2044340 Rhizobium leguminosarum bv. trifolii WSM1325 8013079 YP_002975867.1 CDS hisI NC_012850.1 2044366 2044818 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 2044366..2044818 Rhizobium leguminosarum bv. trifolii WSM1325 8013080 YP_002975868.1 CDS Rleg_2051 NC_012850.1 2044930 2045892 D PFAM: Patatin; KEGG: rec:RHECIAT_CH0002291 phosphoesterase protein; patatin 2044930..2045892 Rhizobium leguminosarum bv. trifolii WSM1325 8013081 YP_002975869.1 CDS Rleg_2052 NC_012850.1 2045962 2046396 R PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: rec:RHECIAT_CH0002292 inosine-5'-monophosphate dehydrogenase protein; signal transduction protein with CBS domains complement(2045962..2046396) Rhizobium leguminosarum bv. trifolii WSM1325 8013082 YP_002975870.1 CDS Rleg_2053 NC_012850.1 2046490 2047281 R PFAM: Rhomboid family protein; KEGG: rec:RHECIAT_CH0002293 peptidase protein; rhomboid family protein complement(2046490..2047281) Rhizobium leguminosarum bv. trifolii WSM1325 8013083 YP_002975871.1 CDS Rleg_2054 NC_012850.1 2047576 2048193 D PFAM: protein of unknown function DUF1457; KEGG: rec:RHECIAT_CH0002295 hypothetical protein; hypothetical protein 2047576..2048193 Rhizobium leguminosarum bv. trifolii WSM1325 8015635 YP_002975872.1 CDS Rleg_2055 NC_012850.1 2048318 2048929 D PFAM: type IV pilus assembly PilZ; KEGG: rec:RHECIAT_CH0002296 hypothetical protein; type IV pilus assembly PilZ 2048318..2048929 Rhizobium leguminosarum bv. trifolii WSM1325 8013084 YP_002975873.1 CDS Rleg_2056 NC_012850.1 2049305 2050279 D KEGG: ret:RHE_CH02208 proline iminopeptidase protein; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 2049305..2050279 Rhizobium leguminosarum bv. trifolii WSM1325 8013085 YP_002975874.1 CDS Rleg_2057 NC_012850.1 2050655 2051260 D PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rec:RHECIAT_CH0002298 transglutaminase-like cysteine peptidase protein; transglutaminase 2050655..2051260 Rhizobium leguminosarum bv. trifolii WSM1325 8015636 YP_002975875.1 CDS Rleg_2058 NC_012850.1 2051565 2052350 D KEGG: rec:RHECIAT_CH0002299 hypothetical protein; hypothetical protein 2051565..2052350 Rhizobium leguminosarum bv. trifolii WSM1325 8013086 YP_002975876.1 CDS Rleg_2059 NC_012850.1 2052506 2054059 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Sporulation domain protein; KEGG: ret:RHE_CH02211 serine-type D-Ala-D-Ala carboxypeptidase protein; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2052506..2054059 Rhizobium leguminosarum bv. trifolii WSM1325 8013087 YP_002975877.1 CDS Rleg_2060 NC_012850.1 2054173 2054448 D KEGG: ret:RHE_CH02212 hypothetical protein; hypothetical protein 2054173..2054448 Rhizobium leguminosarum bv. trifolii WSM1325 8013088 YP_002975878.1 CDS Rleg_2061 NC_012850.1 2054539 2054976 R PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0002302 hypothetical protein; hypothetical protein complement(2054539..2054976) Rhizobium leguminosarum bv. trifolii WSM1325 8013089 YP_002975879.1 CDS Rleg_2062 NC_012850.1 2055038 2056441 R KEGG: ret:RHE_CH02214 L-serine dehydratase protein; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 complement(2055038..2056441) Rhizobium leguminosarum bv. trifolii WSM1325 8013090 YP_002975880.1 CDS Rleg_2063 NC_012850.1 2056835 2057233 D KEGG: sme:SMa2267 hypothetical protein; hypothetical protein 2056835..2057233 Rhizobium leguminosarum bv. trifolii WSM1325 8013091 YP_002975881.1 CDS Rleg_2064 NC_012850.1 2057235 2058434 R PFAM: acyltransferase; KEGG: rec:RHECIAT_PA0000025 acyltransferase protein; acyltransferase complement(2057235..2058434) Rhizobium leguminosarum bv. trifolii WSM1325 8013092 YP_002975882.1 CDS Rleg_2065 NC_012850.1 2058654 2059103 D KEGG: sil:SPO3180 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 2058654..2059103 Rhizobium leguminosarum bv. trifolii WSM1325 8013093 YP_002975883.1 CDS Rleg_2066 NC_012850.1 2059340 2060104 D PFAM: protein of unknown function DUF599; KEGG: rec:RHECIAT_CH0002324 hypothetical conserved membrane protein; hypothetical protein 2059340..2060104 Rhizobium leguminosarum bv. trifolii WSM1325 8013094 YP_002975884.1 CDS Rleg_2067 NC_012850.1 2060104 2061093 D PFAM: protein of unknown function DUF1624; KEGG: rec:RHECIAT_CH0002325 hypothetical conserved membrane protein; hypothetical protein 2060104..2061093 Rhizobium leguminosarum bv. trifolii WSM1325 8013095 YP_002975885.1 CDS Rleg_2068 NC_012850.1 2061118 2061504 R PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rec:RHECIAT_CH0002326 probable transcriptional regulator protein, MerR family; MerR family transcriptional regulator complement(2061118..2061504) Rhizobium leguminosarum bv. trifolii WSM1325 8013096 YP_002975886.1 CDS Rleg_2069 NC_012850.1 2061575 2062990 R KEGG: ret:RHE_CH02218 magnesium transporter protein; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; SMART: CBS domain containing protein; magnesium transporter complement(2061575..2062990) Rhizobium leguminosarum bv. trifolii WSM1325 8013097 YP_002975887.1 CDS Rleg_2070 NC_012850.1 2063232 2063726 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2063232..2063726 Rhizobium leguminosarum bv. trifolii WSM1325 8015637 YP_002975888.1 CDS Rleg_2071 NC_012850.1 2063810 2064328 D PFAM: transport-associated; KEGG: ret:RHE_CH02220 hypothetical protein; transport-associated 2063810..2064328 Rhizobium leguminosarum bv. trifolii WSM1325 8013098 YP_002975889.1 CDS Rleg_2072 NC_012850.1 2064651 2065016 D KEGG: rec:RHECIAT_CH0002330 hypothetical protein; hypothetical protein 2064651..2065016 Rhizobium leguminosarum bv. trifolii WSM1325 8013099 YP_002975890.1 CDS Rleg_2073 NC_012850.1 2065113 2065757 R KEGG: rec:RHECIAT_CH0002331 hypothetical protein; hypothetical protein complement(2065113..2065757) Rhizobium leguminosarum bv. trifolii WSM1325 8013100 YP_002975891.1 CDS Rleg_2074 NC_012850.1 2065921 2066634 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(2065921..2066634) Rhizobium leguminosarum bv. trifolii WSM1325 8013101 YP_002975892.1 CDS Rleg_2075 NC_012850.1 2067035 2067955 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH02224 permease protein; hypothetical protein 2067035..2067955 Rhizobium leguminosarum bv. trifolii WSM1325 8013102 YP_002975893.1 CDS Rleg_2076 NC_012850.1 2068053 2068757 D KEGG: ret:RHE_CH02225 hypothetical protein; hypothetical protein 2068053..2068757 Rhizobium leguminosarum bv. trifolii WSM1325 8013103 YP_002975894.1 CDS Rleg_2077 NC_012850.1 2068833 2070854 D PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: rec:RHECIAT_CH0002336 propionyl-CoA carboxylase protein, alpha subunit; carbamoyl-phosphate synthase L chain ATP-binding 2068833..2070854 Rhizobium leguminosarum bv. trifolii WSM1325 8013104 YP_002975895.1 CDS Rleg_2078 NC_012850.1 2070961 2071545 D PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02228 acetyltransferase protein; N-acetyltransferase GCN5 2070961..2071545 Rhizobium leguminosarum bv. trifolii WSM1325 8013105 YP_002975896.1 CDS Rleg_2079 NC_012850.1 2071556 2072023 D PFAM: protein of unknown function DUF188; KEGG: ret:RHE_CH02229 hypothetical protein; hypothetical protein 2071556..2072023 Rhizobium leguminosarum bv. trifolii WSM1325 8015639 YP_002975897.1 CDS Rleg_2080 NC_012850.1 2072237 2072551 D PFAM: small multidrug resistance protein; KEGG: ret:RHE_CH02230 chaperone-like transmembrane protein; small multidrug resistance protein 2072237..2072551 Rhizobium leguminosarum bv. trifolii WSM1325 8013106 YP_002975898.1 CDS Rleg_2081 NC_012850.1 2072594 2072986 R PFAM: DoxX family protein; KEGG: ret:RHE_CH02231 hypothetical protein; DoxX family protein complement(2072594..2072986) Rhizobium leguminosarum bv. trifolii WSM1325 8015640 YP_002975899.1 CDS Rleg_2082 NC_012850.1 2073126 2074658 R PFAM: carboxyl transferase; KEGG: ret:RHE_CH02232 propionyl-CoA carboxylase beta chain protein; carboxyl transferase complement(2073126..2074658) Rhizobium leguminosarum bv. trifolii WSM1325 8013107 YP_002975900.1 CDS Rleg_2083 NC_012850.1 2074709 2075167 R KEGG: ret:RHE_CH02233 hypothetical protein; hypothetical protein complement(2074709..2075167) Rhizobium leguminosarum bv. trifolii WSM1325 8013108 YP_002975901.1 CDS Rleg_2084 NC_012850.1 2075236 2076021 R PFAM: ATP12 ATPase; KEGG: ret:RHE_CH02234 hypothetical protein; ATP12 ATPase complement(2075236..2076021) Rhizobium leguminosarum bv. trifolii WSM1325 8015641 YP_002975902.1 CDS Rleg_2085 NC_012850.1 2076031 2076684 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0002344 phosphoglycolate phosphatase protein; HAD-superfamily hydrolase complement(2076031..2076684) Rhizobium leguminosarum bv. trifolii WSM1325 8013109 YP_002975903.1 CDS Rleg_2086 NC_012850.1 2076681 2077673 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: rec:RHECIAT_CH0002345 RNA-pseudouridine synthase protein, ribosomal large subunit C; RluA family pseudouridine synthase complement(2076681..2077673) Rhizobium leguminosarum bv. trifolii WSM1325 8013110 YP_002975904.1 CDS Rleg_2087 NC_012850.1 2077768 2078145 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2077768..2078145) Rhizobium leguminosarum bv. trifolii WSM1325 8013111 YP_002975905.1 CDS Rleg_2088 NC_012850.1 2078267 2078533 D KEGG: ret:RHE_CH02238 hypothetical protein; hypothetical protein 2078267..2078533 Rhizobium leguminosarum bv. trifolii WSM1325 8013112 YP_002975906.1 CDS Rleg_2089 NC_012850.1 2078607 2079620 R PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: rec:RHECIAT_CH0002348 hypothetical protein; hypothetical protein complement(2078607..2079620) Rhizobium leguminosarum bv. trifolii WSM1325 8013113 YP_002975907.1 CDS Rleg_2090 NC_012850.1 2079694 2080074 R KEGG: rec:RHECIAT_CH0002349 hypothetical protein; hypothetical protein complement(2079694..2080074) Rhizobium leguminosarum bv. trifolii WSM1325 8013114 YP_002975908.1 CDS gcvT NC_012850.1 2080482 2081618 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 2080482..2081618 Rhizobium leguminosarum bv. trifolii WSM1325 8013115 YP_002975909.1 CDS Rleg_2092 NC_012850.1 2081642 2082004 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 2081642..2082004 Rhizobium leguminosarum bv. trifolii WSM1325 8013116 YP_002975910.1 CDS Rleg_2093 NC_012850.1 2082004 2084868 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 2082004..2084868 Rhizobium leguminosarum bv. trifolii WSM1325 8013117 YP_002975911.1 CDS Rleg_2094 NC_012850.1 2085176 2086144 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdj:Gdia_1453 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2085176..2086144) Rhizobium leguminosarum bv. trifolii WSM1325 8013118 YP_002975912.1 CDS Rleg_2095 NC_012850.1 2086278 2086862 D PFAM: regulatory protein TetR; KEGG: gdj:Gdia_1452 transcriptional regulator, TetR family; TetR family transcriptional regulator 2086278..2086862 Rhizobium leguminosarum bv. trifolii WSM1325 8013119 YP_002975913.1 CDS Rleg_2097 NC_012850.1 2087274 2088320 D PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: rec:RHECIAT_CH0002353 cell-wall lytic enzyme; glycoside hydrolase 2087274..2088320 Rhizobium leguminosarum bv. trifolii WSM1325 8013121 YP_002975914.1 CDS Rleg_2098 NC_012850.1 2088352 2090637 R KEGG: atc:AGR_L_213 hypothetical protein; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit complement(2088352..2090637) Rhizobium leguminosarum bv. trifolii WSM1325 8013122 YP_002975915.1 CDS Rleg_2099 NC_012850.1 2091122 2091640 D PFAM: ferritin Dps family protein; KEGG: azc:AZC_4121 low temperature-induced protein; ferritin Dps family protein 2091122..2091640 Rhizobium leguminosarum bv. trifolii WSM1325 8013123 YP_002975916.1 CDS Rleg_2100 NC_012850.1 2092103 2092408 D PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ret:RHE_CH02245 flagellar basal body rod protein; hypothetical protein 2092103..2092408 Rhizobium leguminosarum bv. trifolii WSM1325 8013124 YP_002975917.1 CDS Rleg_2101 NC_012850.1 2092475 2092867 R TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rec:RHECIAT_CH0002356 hypothetical protein; FeS assembly scaffold SufA complement(2092475..2092867) Rhizobium leguminosarum bv. trifolii WSM1325 8013125 YP_002975918.1 CDS Rleg_2102 NC_012850.1 2092961 2093341 R TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: ret:RHE_CH02248 hypothetical protein; FeS assembly SUF system protein complement(2092961..2093341) Rhizobium leguminosarum bv. trifolii WSM1325 8013126 YP_002975919.1 CDS Rleg_2103 NC_012850.1 2093354 2094595 R TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rec:RHECIAT_CH0002358 selenocysteine lyase protein; SufS subfamily cysteine desulfurase complement(2093354..2094595) Rhizobium leguminosarum bv. trifolii WSM1325 8013127 YP_002975920.1 CDS Rleg_2104 NC_012850.1 2094608 2095882 R TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: ret:RHE_CH02250 ABC transporter involved in Fe-S cluster assembly, permease protein; FeS assembly protein SufD complement(2094608..2095882) Rhizobium leguminosarum bv. trifolii WSM1325 8013128 YP_002975921.1 CDS Rleg_2105 NC_012850.1 2095908 2096663 R KEGG: rec:RHECIAT_CH0002360 ABC transporter involved in Fe-S cluster assembly, ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: AAA ATPase; FeS assembly ATPase SufC complement(2095908..2096663) Rhizobium leguminosarum bv. trifolii WSM1325 8013129 YP_002975922.1 CDS Rleg_2106 NC_012850.1 2096747 2096992 R KEGG: rec:RHECIAT_CH0002361 hypothetical protein; hypothetical protein complement(2096747..2096992) Rhizobium leguminosarum bv. trifolii WSM1325 8013130 YP_002975923.1 CDS Rleg_2107 NC_012850.1 2096994 2098463 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(2096994..2098463) Rhizobium leguminosarum bv. trifolii WSM1325 8013131 YP_002975924.1 CDS Rleg_2108 NC_012850.1 2098557 2099774 R PFAM: aminotransferase class V; KEGG: rec:RHECIAT_CH0002363 cysteine desulfurase protein (nitrogenase cofactor synthesis protein); class V aminotransferase complement(2098557..2099774) Rhizobium leguminosarum bv. trifolii WSM1325 8013132 YP_002975925.1 CDS Rleg_2109 NC_012850.1 2099992 2100669 D KEGG: ret:RHE_CH02255 alpha/beta hydrolase; alpha/beta hydrolase 2099992..2100669 Rhizobium leguminosarum bv. trifolii WSM1325 8013133 YP_002975926.1 CDS Rleg_2110 NC_012850.1 2100812 2101987 D PFAM: acyltransferase; KEGG: rec:RHECIAT_CH0002365 nodulation protein X (probable sugar acetylase); acyltransferase 2100812..2101987 Rhizobium leguminosarum bv. trifolii WSM1325 8013134 YP_002975927.1 CDS Rleg_2111 NC_012850.1 2101984 2102511 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0002366 acetyltransferase protein; N-acetyltransferase GCN5 complement(2101984..2102511) Rhizobium leguminosarum bv. trifolii WSM1325 8015642 YP_002975928.1 CDS anmK NC_012850.1 2102508 2103626 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(2102508..2103626) Rhizobium leguminosarum bv. trifolii WSM1325 8013135 YP_002975929.1 CDS Rleg_2113 NC_012850.1 2103760 2105016 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2103760..2105016 Rhizobium leguminosarum bv. trifolii WSM1325 8013136 YP_002975930.1 CDS Rleg_2114 NC_012850.1 2105078 2105383 R KEGG: ret:RHE_CH02259 hypothetical protein; hypothetical protein complement(2105078..2105383) Rhizobium leguminosarum bv. trifolii WSM1325 8013137 YP_002975931.1 CDS Rleg_2115 NC_012850.1 2105623 2107284 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rec:RHECIAT_CH0002370 maltose alpha-D-glucosyltransferase protein; alpha amylase 2105623..2107284 Rhizobium leguminosarum bv. trifolii WSM1325 8013138 YP_002975932.1 CDS Rleg_2116 NC_012850.1 2107325 2110723 R KEGG: rec:RHECIAT_CH0002371 hypothetical protein; hypothetical protein complement(2107325..2110723) Rhizobium leguminosarum bv. trifolii WSM1325 8013139 YP_002975933.1 CDS Rleg_2117 NC_012850.1 2110849 2111322 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ret:RHE_CH02262 bacterioferritin comigratory protein; alkyl hydroperoxide reductase 2110849..2111322 Rhizobium leguminosarum bv. trifolii WSM1325 8013140 YP_002975934.1 CDS Rleg_2118 NC_012850.1 2111319 2112146 D PFAM: protein of unknown function DUF455; KEGG: ret:RHE_CH02263 hypothetical protein; hypothetical protein 2111319..2112146 Rhizobium leguminosarum bv. trifolii WSM1325 8013141 YP_002975935.1 CDS Rleg_2119 NC_012850.1 2112251 2113573 D PFAM: peptidase M23; KEGG: rec:RHECIAT_CH0002374 probable metalloendopeptidase protein; peptidase M23 2112251..2113573 Rhizobium leguminosarum bv. trifolii WSM1325 8013142 YP_002975936.1 CDS Rleg_2120 NC_012850.1 2113712 2115277 D PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: ret:RHE_CH02265 ATP dependent RNA helicase protein; DEAD/DEAH box helicase 2113712..2115277 Rhizobium leguminosarum bv. trifolii WSM1325 8013143 YP_002975937.1 CDS Rleg_2121 NC_012850.1 2115286 2115708 D PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0002376 hydrolase protein, MutT/NUDIX family; NUDIX hydrolase 2115286..2115708 Rhizobium leguminosarum bv. trifolii WSM1325 8015643 YP_002975938.1 CDS Rleg_2122 NC_012850.1 2115709 2116026 R PFAM: TfoX domain protein; KEGG: rec:RHECIAT_CH0002377 regulator of competence-specific genes protein, TfoX family; TfoX domain-containing protein complement(2115709..2116026) Rhizobium leguminosarum bv. trifolii WSM1325 8013144 YP_002975939.1 CDS Rleg_2123 NC_012850.1 2116074 2116568 R PFAM: flavin reductase domain protein FMN-binding; KEGG: ret:RHE_CH02268 4-hydroxyphenylacetate 3-monooxygenase small chain protein; flavin reductase domain-containing FMN-binding protein complement(2116074..2116568) Rhizobium leguminosarum bv. trifolii WSM1325 8013145 YP_002975940.1 CDS Rleg_2124 NC_012850.1 2116752 2117834 D PFAM: Extracellular ligand-binding receptor; KEGG: ret:RHE_CH02269 amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor 2116752..2117834 Rhizobium leguminosarum bv. trifolii WSM1325 8015644 YP_002975941.1 CDS Rleg_2125 NC_012850.1 2117899 2118576 D KEGG: ret:RHE_CH02270 D-ribulose-5 phosphate 3-epimerase protein; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 2117899..2118576 Rhizobium leguminosarum bv. trifolii WSM1325 8013146 YP_002975942.1 CDS Rleg_2126 NC_012850.1 2118573 2119298 D KEGG: ret:RHE_CH02271 hypothetical protein; hypothetical protein 2118573..2119298 Rhizobium leguminosarum bv. trifolii WSM1325 8013147 YP_002975943.1 CDS Rleg_2127 NC_012850.1 2119331 2119816 D KEGG: rec:RHECIAT_CH0002382 hypothetical protein; hypothetical protein 2119331..2119816 Rhizobium leguminosarum bv. trifolii WSM1325 8013148 YP_002975944.1 CDS Rleg_2128 NC_012850.1 2119875 2121182 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2119875..2121182 Rhizobium leguminosarum bv. trifolii WSM1325 8013149 YP_002975945.1 CDS Rleg_2129 NC_012850.1 2121430 2121849 D KEGG: ret:RHE_PE00429 hypothetical protein; hypothetical protein 2121430..2121849 Rhizobium leguminosarum bv. trifolii WSM1325 8013150 YP_002975946.1 CDS Rleg_2130 NC_012850.1 2121931 2122347 D KEGG: ret:RHE_PE00428 hypothetical protein; hypothetical protein 2121931..2122347 Rhizobium leguminosarum bv. trifolii WSM1325 8013151 YP_002975947.1 CDS Rleg_2131 NC_012850.1 2122559 2123026 R PFAM: protein of unknown function DUF1452; KEGG: rec:RHECIAT_CH0002384 hypothetical conserved membrane protein; hypothetical protein complement(2122559..2123026) Rhizobium leguminosarum bv. trifolii WSM1325 8015645 YP_002975948.1 CDS Rleg_2132 NC_012850.1 2123176 2123982 R KEGG: rec:RHECIAT_CH0002385 hypothetical conserved membrane protein; hypothetical protein complement(2123176..2123982) Rhizobium leguminosarum bv. trifolii WSM1325 8013152 YP_002975949.1 CDS Rleg_2133 NC_012850.1 2124158 2124712 D PFAM: protein of unknown function DUF1234; KEGG: rec:RHECIAT_CH0002386 hypothetical protein; hypothetical protein 2124158..2124712 Rhizobium leguminosarum bv. trifolii WSM1325 8015646 YP_002975950.1 CDS Rleg_2134 NC_012850.1 2124809 2127100 D KEGG: rec:RHECIAT_CH0002387 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2124809..2127100 Rhizobium leguminosarum bv. trifolii WSM1325 8013153 YP_002975951.1 CDS Rleg_2135 NC_012850.1 2127350 2128114 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 2127350..2128114 Rhizobium leguminosarum bv. trifolii WSM1325 8013154 YP_002975952.1 CDS Rleg_2136 NC_012850.1 2128130 2128372 D With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 2128130..2128372 Rhizobium leguminosarum bv. trifolii WSM1325 8015647 YP_002975953.1 CDS Rleg_2137 NC_012850.1 2128417 2128971 D in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown; RNA 2'-phosphotransferase-like protein 2128417..2128971 Rhizobium leguminosarum bv. trifolii WSM1325 8013155 YP_002975954.1 CDS Rleg_2138 NC_012850.1 2128968 2129639 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 2128968..2129639 Rhizobium leguminosarum bv. trifolii WSM1325 8013156 YP_002975955.1 CDS Rleg_2139 NC_012850.1 2129685 2130080 D KEGG: ret:RHE_CH02282 hypothetical protein; hypothetical protein 2129685..2130080 Rhizobium leguminosarum bv. trifolii WSM1325 8013157 YP_002975956.1 CDS Rleg_2140 NC_012850.1 2130204 2130461 R KEGG: ret:RHE_CH02283 hypothetical protein; hypothetical protein complement(2130204..2130461) Rhizobium leguminosarum bv. trifolii WSM1325 8013158 YP_002975957.1 CDS Rleg_2141 NC_012850.1 2130543 2131961 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0002394 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator 2130543..2131961 Rhizobium leguminosarum bv. trifolii WSM1325 8013159 YP_002975958.1 CDS Rleg_2142 NC_012850.1 2132084 2132662 D KEGG: ret:RHE_CH02285 hypothetical protein; hypothetical protein 2132084..2132662 Rhizobium leguminosarum bv. trifolii WSM1325 8013160 YP_002975959.1 CDS Rleg_2143 NC_012850.1 2132754 2134496 R PFAM: protein of unknown function DUF521; protein of unknown function DUF126; KEGG: hypothetical protein; hypothetical protein complement(2132754..2134496) Rhizobium leguminosarum bv. trifolii WSM1325 8013161 YP_002975960.1 CDS Rleg_2144 NC_012850.1 2134756 2136990 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 2134756..2136990 Rhizobium leguminosarum bv. trifolii WSM1325 8015648 YP_002975961.1 CDS Rleg_2145 NC_012850.1 2137010 2137243 D PFAM: BolA family protein; KEGG: ret:RHE_CH02287 stress-induced morphogen protein; BolA family protein 2137010..2137243 Rhizobium leguminosarum bv. trifolii WSM1325 8013162 YP_002975962.1 CDS Rleg_2146 NC_012850.1 2137278 2138459 R KEGG: rec:RHECIAT_CH0002398 hypothetical protein; hypothetical protein complement(2137278..2138459) Rhizobium leguminosarum bv. trifolii WSM1325 8013163 YP_002975963.1 CDS Rleg_2147 NC_012850.1 2138611 2138841 D KEGG: smd:Smed_1507 hypothetical protein; hypothetical protein 2138611..2138841 Rhizobium leguminosarum bv. trifolii WSM1325 8013164 YP_002975964.1 CDS Rleg_2148 NC_012850.1 2138903 2139724 D KEGG: reu:Reut_A2664 hypothetical protein; hypothetical protein 2138903..2139724 Rhizobium leguminosarum bv. trifolii WSM1325 8013165 YP_002975965.1 CDS Rleg_2149 NC_012850.1 2139869 2140204 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ret:RHE_CH02304 glutaredoxin protein; glutaredoxin-like protein 2139869..2140204 Rhizobium leguminosarum bv. trifolii WSM1325 8015649 YP_002975966.1 CDS Rleg_2150 NC_012850.1 2140342 2141547 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH02305 Bcr/CflA subfamily drug resistance transporter; Bcr/CflA subfamily drug resistance transporter 2140342..2141547 Rhizobium leguminosarum bv. trifolii WSM1325 8013166 YP_002975967.1 CDS Rleg_2151 NC_012850.1 2141583 2142863 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: rec:RHECIAT_CH0002402 probable multidrug resistance transporter protein; major facilitator superfamily protein 2141583..2142863 Rhizobium leguminosarum bv. trifolii WSM1325 8013167 YP_002975968.1 CDS Rleg_2152 NC_012850.1 2143054 2143878 R PFAM: inositol monophosphatase; KEGG: rec:RHECIAT_CH0002404 inositol monophosphatase protein; inositol monophosphatase complement(2143054..2143878) Rhizobium leguminosarum bv. trifolii WSM1325 8013168 YP_002975969.1 CDS Rleg_2153 NC_012850.1 2143919 2144746 R PFAM: inositol monophosphatase; KEGG: rec:RHECIAT_CH0002405 inositol monophosphatase protein; inositol monophosphatase complement(2143919..2144746) Rhizobium leguminosarum bv. trifolii WSM1325 8013169 YP_002975970.1 CDS Rleg_2154 NC_012850.1 2144792 2145661 R TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase complement(2144792..2145661) Rhizobium leguminosarum bv. trifolii WSM1325 8013170 YP_002975971.1 CDS Rleg_2155 NC_012850.1 2145722 2146651 R catalyzes the formation of glutamate from glutamine; glutaminase complement(2145722..2146651) Rhizobium leguminosarum bv. trifolii WSM1325 8013171 YP_002975972.1 CDS rpsD NC_012850.1 2146754 2147371 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(2146754..2147371) Rhizobium leguminosarum bv. trifolii WSM1325 8013172 YP_002975973.1 CDS Rleg_2157 NC_012850.1 2147596 2149110 R SMART: AAA ATPase; KEGG: ret:RHE_CH02313 hypothetical protein; ATPase AAA complement(2147596..2149110) Rhizobium leguminosarum bv. trifolii WSM1325 8013173 YP_002975974.1 CDS Rleg_2158 NC_012850.1 2149144 2149335 R hypothetical protein complement(2149144..2149335) Rhizobium leguminosarum bv. trifolii WSM1325 8013174 YP_002975975.1 CDS Rleg_2159 NC_012850.1 2149332 2150507 R PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce4003 major facilitator superfamily permease; major facilitator superfamily protein complement(2149332..2150507) Rhizobium leguminosarum bv. trifolii WSM1325 8015650 YP_002975976.1 CDS Rleg_2160 NC_012850.1 2150604 2151407 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(2150604..2151407) Rhizobium leguminosarum bv. trifolii WSM1325 8013175 YP_002975977.1 CDS Rleg_2161 NC_012850.1 2151388 2152218 R TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ret:RHE_CH02315 tRNA/rRNA methyltransferase protein; RNA methyltransferase, TrmH family, group 1 complement(2151388..2152218) Rhizobium leguminosarum bv. trifolii WSM1325 8013176 YP_002975978.1 CDS Rleg_2162 NC_012850.1 2152223 2154262 R KEGG: rec:RHECIAT_CH0002412 hypothetical conserved membrane protein; hypothetical protein complement(2152223..2154262) Rhizobium leguminosarum bv. trifolii WSM1325 8013177 YP_002975979.1 CDS Rleg_2163 NC_012850.1 2154360 2154887 R KEGG: rec:RHECIAT_CH0002413 hypothetical protein; hypothetical protein complement(2154360..2154887) Rhizobium leguminosarum bv. trifolii WSM1325 8013178 YP_002975980.1 CDS Rleg_2164 NC_012850.1 2155075 2156286 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2155075..2156286 Rhizobium leguminosarum bv. trifolii WSM1325 8015651 YP_002975981.1 CDS Rleg_2165 NC_012850.1 2156357 2156803 D PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02319 acetyltransferase protein; N-acetyltransferase GCN5 2156357..2156803 Rhizobium leguminosarum bv. trifolii WSM1325 8013179 YP_002975982.1 CDS Rleg_2166 NC_012850.1 2156891 2157517 D PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH02320 glutathione S-transferase protein; glutathione S-transferase domain protein 2156891..2157517 Rhizobium leguminosarum bv. trifolii WSM1325 8013180 YP_002975983.1 CDS Rleg_2167 NC_012850.1 2157563 2158414 R PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0002417 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator complement(2157563..2158414) Rhizobium leguminosarum bv. trifolii WSM1325 8013181 YP_002975984.1 CDS alaS NC_012850.1 2158563 2161217 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2158563..2161217) Rhizobium leguminosarum bv. trifolii WSM1325 8013182 YP_002975985.1 CDS recA NC_012850.1 2161372 2162466 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2161372..2162466) Rhizobium leguminosarum bv. trifolii WSM1325 8015652 YP_002975986.1 CDS Rleg_2170 NC_012850.1 2162696 2163640 D PFAM: PfkB domain protein; KEGG: rec:RHECIAT_CH0002421 ribokinase protein; PfkB domain-containing protein 2162696..2163640 Rhizobium leguminosarum bv. trifolii WSM1325 8013183 YP_002975987.1 CDS Rleg_2171 NC_012850.1 2163729 2164655 D PFAM: Indigoidine synthase A family protein; KEGG: ret:RHE_CH02325 hypothetical protein; Indigoidine synthase A family protein 2163729..2164655 Rhizobium leguminosarum bv. trifolii WSM1325 8013184 YP_002975988.1 CDS Rleg_2172 NC_012850.1 2164767 2165975 R PFAM: Integrase catalytic region; KEGG: hne:HNE_3190 ISHne2, transposase; integrase catalytic subunit complement(2164767..2165975) Rhizobium leguminosarum bv. trifolii WSM1325 8013185 YP_002975989.1 CDS Rleg_2173 NC_012850.1 2166254 2168857 R KEGG: rec:RHECIAT_CH0002423 probable two-component sensor histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(2166254..2168857) Rhizobium leguminosarum bv. trifolii WSM1325 8013186 YP_002975990.1 CDS Rleg_2174 NC_012850.1 2169163 2170218 D KEGG: rec:RHECIAT_CH0002424 hypothetical protein; FHA domain-containing protein 2169163..2170218 Rhizobium leguminosarum bv. trifolii WSM1325 8013187 YP_002975991.1 CDS Rleg_2175 NC_012850.1 2170618 2171253 D PFAM: protein of unknown function DUF1062; KEGG: ret:RHE_CH02328 hypothetical protein; hypothetical protein 2170618..2171253 Rhizobium leguminosarum bv. trifolii WSM1325 8013188 YP_002975992.1 CDS Rleg_2176 NC_012850.1 2171393 2171812 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: rec:RHECIAT_CH0002426 DnaK suppressor protein; TraR/DksA family transcriptional regulator complement(2171393..2171812) Rhizobium leguminosarum bv. trifolii WSM1325 8013189 YP_002975993.1 CDS Rleg_2177 NC_012850.1 2172089 2172583 D PFAM: phosphoglycerate mutase; KEGG: ret:RHE_CH02330 phosphohistidine phosphatase protein; phosphohistidine phosphatase, SixA 2172089..2172583 Rhizobium leguminosarum bv. trifolii WSM1325 8013190 YP_002975994.1 CDS Rleg_2178 NC_012850.1 2172659 2174134 D PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: rec:RHECIAT_CH0002429 hypothetical protein; hypothetical protein 2172659..2174134 Rhizobium leguminosarum bv. trifolii WSM1325 8013191 YP_002975995.1 CDS Rleg_2179 NC_012850.1 2174131 2175210 D PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0002430 hypothetical conserved membrane protein; hypothetical protein 2174131..2175210 Rhizobium leguminosarum bv. trifolii WSM1325 8013192 YP_002975996.1 CDS Rleg_2180 NC_012850.1 2175421 2175972 D KEGG: rec:RHECIAT_CH0002431 hypothetical protein; hypothetical protein 2175421..2175972 Rhizobium leguminosarum bv. trifolii WSM1325 8013193 YP_002975997.1 CDS Rleg_2181 NC_012850.1 2176041 2176544 R KEGG: ret:RHE_CH02334 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinas E protein; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2176041..2176544) Rhizobium leguminosarum bv. trifolii WSM1325 8013194 YP_002975998.1 CDS Rleg_2182 NC_012850.1 2176552 2176917 R TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: ret:RHE_CH02335 dihydroneopterin aldolase protein; dihydroneopterin aldolase complement(2176552..2176917) Rhizobium leguminosarum bv. trifolii WSM1325 8013195 YP_002975999.1 CDS Rleg_2183 NC_012850.1 2176914 2177783 R KEGG: ret:RHE_CH02336 dihydropteroate synthase protein; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(2176914..2177783) Rhizobium leguminosarum bv. trifolii WSM1325 8013196 YP_002976000.1 CDS Rleg_2184 NC_012850.1 2177885 2178511 D PFAM: protein of unknown function DUF922; KEGG: rec:RHECIAT_CH0002435 hypothetical protein; hypothetical protein 2177885..2178511 Rhizobium leguminosarum bv. trifolii WSM1325 8013197 YP_002976001.1 CDS Rleg_2185 NC_012850.1 2178830 2179150 R PFAM: ferredoxin; KEGG: ret:RHE_CH02338 ferredoxin, 2Fe-2S FDII electron transport iron-sulfur protein; ferredoxin complement(2178830..2179150) Rhizobium leguminosarum bv. trifolii WSM1325 8013198 YP_002976002.1 CDS Rleg_2186 NC_012850.1 2179410 2179793 R PFAM: Hpt domain protein; KEGG: rec:RHECIAT_CH0002437 hypothetical protein; Hpt protein complement(2179410..2179793) Rhizobium leguminosarum bv. trifolii WSM1325 8013199 YP_002976003.1 CDS Rleg_2187 NC_012850.1 2180256 2187251 D KEGG: ret:RHE_CH02340 hypothetical protein; hypothetical protein 2180256..2187251 Rhizobium leguminosarum bv. trifolii WSM1325 8013200 YP_002976004.1 CDS Rleg_2188 NC_012850.1 2187343 2187903 D PFAM: isochorismatase hydrolase; KEGG: ret:RHE_CH02341 isochorismatase protein; isochorismatase hydrolase 2187343..2187903 Rhizobium leguminosarum bv. trifolii WSM1325 8015653 YP_002976005.1 CDS Rleg_2189 NC_012850.1 2187959 2188795 R PFAM: tRNA synthetase class II (G H P and S); KEGG: tRNA synthetase class II (G H P and S) ; K01880 glycyl-tRNA synthetase; tRNA synthetase class II (G H P and S) complement(2187959..2188795) Rhizobium leguminosarum bv. trifolii WSM1325 8013201 YP_002976006.1 CDS Rleg_2190 NC_012850.1 2189076 2189954 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; KEGG: ret:RHE_CH02344 D-alanyl-D-alanine carboxypeptidase protein; serine-type D-Ala-D-Ala carboxypeptidase 2189076..2189954 Rhizobium leguminosarum bv. trifolii WSM1325 8013202 YP_002976007.1 CDS Rleg_2191 NC_012850.1 2190067 2191320 R KEGG: rec:RHECIAT_CH0002442 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(2190067..2191320) Rhizobium leguminosarum bv. trifolii WSM1325 8013203 YP_002976008.1 CDS Rleg_2192 NC_012850.1 2191468 2192079 R PFAM: protein of unknown function DUF330; KEGG: ret:RHE_CH02346 ABC transporter protein; hypothetical protein complement(2191468..2192079) Rhizobium leguminosarum bv. trifolii WSM1325 8013204 YP_002976009.1 CDS Rleg_2193 NC_012850.1 2192104 2193474 R PFAM: Mammalian cell entry related domain protein; KEGG: ret:RHE_CH02347 ABC transporter protein; mammalian cell entry domain-containing protein complement(2192104..2193474) Rhizobium leguminosarum bv. trifolii WSM1325 8015654 YP_002976010.1 CDS Rleg_2194 NC_012850.1 2193484 2194329 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002445 probable ABC transporter, ATP-binding protein; ABC transporter complement(2193484..2194329) Rhizobium leguminosarum bv. trifolii WSM1325 8013205 YP_002976011.1 CDS Rleg_2195 NC_012850.1 2194331 2195515 R PFAM: protein of unknown function DUF140; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rec:RHECIAT_CH0002446 probable ABC transporter, permease protein; hypothetical protein complement(2194331..2195515) Rhizobium leguminosarum bv. trifolii WSM1325 8013206 YP_002976012.1 CDS Rleg_2196 NC_012850.1 2195600 2196583 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rec:RHECIAT_CH0002447 racemase/isomerase protein; mandelate racemase/muconate lactonizing protein 2195600..2196583 Rhizobium leguminosarum bv. trifolii WSM1325 8013207 YP_002976013.1 CDS Rleg_2197 NC_012850.1 2196535 2197755 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0002448 3-phenylpropionic acid permease protein; major facilitator superfamily protein complement(2196535..2197755) Rhizobium leguminosarum bv. trifolii WSM1325 8013208 YP_002976014.1 CDS Rleg_2198 NC_012850.1 2197921 2198763 R PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0002449 UDP-2,3-diacylglucosamine hydrolase protein; metallophosphoesterase complement(2197921..2198763) Rhizobium leguminosarum bv. trifolii WSM1325 8015655 YP_002976015.1 CDS Rleg_2199 NC_012850.1 2198998 2199747 D PFAM: phosphoglycerate mutase; KEGG: ret:RHE_CH02353 phosphoglycerate mutase protein; phosphoglycerate mutase 2198998..2199747 Rhizobium leguminosarum bv. trifolii WSM1325 8013209 YP_002976016.1 CDS Rleg_2200 NC_012850.1 2199814 2202966 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rru:Rru_A1118 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(2199814..2202966) Rhizobium leguminosarum bv. trifolii WSM1325 8013210 YP_002976017.1 CDS Rleg_2201 NC_012850.1 2202972 2204144 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rru:Rru_A1117 secretion protein HlyD; RND family efflux transporter MFP subunit complement(2202972..2204144) Rhizobium leguminosarum bv. trifolii WSM1325 8013211 YP_002976018.1 CDS Rleg_2202 NC_012850.1 2204384 2204944 D PFAM: regulatory protein TetR; KEGG: atc:AGR_C_4219 hypothetical protein; TetR family transcriptional regulator 2204384..2204944 Rhizobium leguminosarum bv. trifolii WSM1325 8013212 YP_002976019.1 CDS Rleg_2203 NC_012850.1 2205004 2206443 R PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: rec:RHECIAT_CH0002451 probable FAD-dependent oxidoreductase protein; FAD linked oxidase domain-containing protein complement(2205004..2206443) Rhizobium leguminosarum bv. trifolii WSM1325 8015656 YP_002976020.1 CDS Rleg_2204 NC_012850.1 2206629 2207516 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cvi:CV_0982 transcription regulator protein; LysR family transcriptional regulator complement(2206629..2207516) Rhizobium leguminosarum bv. trifolii WSM1325 8013213 YP_002976021.1 CDS Rleg_2205 NC_012850.1 2207620 2208240 D PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: npdG; NADPH-dependent F420 reductase ; K06988; coenzyme F420-dependent NADP oxidoreductase 2207620..2208240 Rhizobium leguminosarum bv. trifolii WSM1325 8013214 YP_002976022.1 CDS Rleg_2206 NC_012850.1 2208396 2210708 D NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 2208396..2210708 Rhizobium leguminosarum bv. trifolii WSM1325 8013215 YP_002976023.1 CDS Rleg_2207 NC_012850.1 2210777 2211310 R PFAM: ribonuclease H; KEGG: ret:RHE_CH02363 ribonuclease H protein; ribonuclease H complement(2210777..2211310) Rhizobium leguminosarum bv. trifolii WSM1325 8013216 YP_002976024.1 CDS Rleg_2208 NC_012850.1 2211361 2211459 D hypothetical protein 2211361..2211459 Rhizobium leguminosarum bv. trifolii WSM1325 8013217 YP_002976025.1 CDS Rleg_2209 NC_012850.1 2211562 2212662 D KEGG: ret:RHE_CH02367 hypothetical protein; hypothetical protein 2211562..2212662 Rhizobium leguminosarum bv. trifolii WSM1325 8013218 YP_002976026.1 CDS Rleg_2210 NC_012850.1 2212780 2213526 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: atc:AGR_L_2039 3-oxoacyl-[acyl-carrier protein] reductase; short-chain dehydrogenase/reductase SDR complement(2212780..2213526) Rhizobium leguminosarum bv. trifolii WSM1325 8013219 YP_002976027.1 CDS Rleg_2211 NC_012850.1 2213717 2214403 R KEGG: ret:RHE_CH02368 nitroreductase protein; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase complement(2213717..2214403) Rhizobium leguminosarum bv. trifolii WSM1325 8013220 YP_002976028.1 CDS Rleg_2212 NC_012850.1 2214685 2215536 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: atc:AGR_L_1733 hypothetical protein; LysR family transcriptional regulator complement(2214685..2215536) Rhizobium leguminosarum bv. trifolii WSM1325 8013221 YP_002976029.1 CDS Rleg_2213 NC_012850.1 2215695 2217242 D PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll5686 transmembrane efflux protein; major facilitator superfamily protein 2215695..2217242 Rhizobium leguminosarum bv. trifolii WSM1325 8013222 YP_002976030.1 CDS Rleg_2214 NC_012850.1 2217275 2218864 D PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll8348 multidrug efflux protein; major facilitator superfamily protein 2217275..2218864 Rhizobium leguminosarum bv. trifolii WSM1325 8013223 YP_002976031.1 CDS Rleg_2215 NC_012850.1 2218936 2219109 D hypothetical protein 2218936..2219109 Rhizobium leguminosarum bv. trifolii WSM1325 8013224 YP_002976032.1 CDS Rleg_2216 NC_012850.1 2219134 2221008 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: atc:AGR_C_3503 methyl-accepting chemotaxis protein McpV; methyl-accepting chemotaxis sensory transducer 2219134..2221008 Rhizobium leguminosarum bv. trifolii WSM1325 8013225 YP_002976033.1 CDS Rleg_2217 NC_012850.1 2221069 2221650 D KEGG: vco:VC0395_0102 hypothetical protein; hypothetical protein 2221069..2221650 Rhizobium leguminosarum bv. trifolii WSM1325 8013226 YP_002976034.1 CDS Rleg_2218 NC_012850.1 2221831 2222454 D KEGG: rec:RHECIAT_CH0002355 hypothetical protein; hypothetical protein 2221831..2222454 Rhizobium leguminosarum bv. trifolii WSM1325 8013227 YP_002976035.1 CDS Rleg_2219 NC_012850.1 2222798 2223859 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2222798..2223859 Rhizobium leguminosarum bv. trifolii WSM1325 8013228 YP_002976036.1 CDS Rleg_2220 NC_012850.1 2223856 2224683 R PFAM: WD40 domain protein beta Propeller; KEGG: ret:RHE_CH02370 periplasmic component of the Tol biopolymer transport system; WD40 domain-containing protein beta Propeller complement(2223856..2224683) Rhizobium leguminosarum bv. trifolii WSM1325 8013229 YP_002976037.1 CDS Rleg_2221 NC_012850.1 2224726 2226405 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(2224726..2226405) Rhizobium leguminosarum bv. trifolii WSM1325 8013230 YP_002976038.1 CDS Rleg_2222 NC_012850.1 2226598 2227128 D PFAM: protein of unknown function DUF1003; KEGG: rec:RHECIAT_CH0002461 hypothetical conserved membrane protein; hypothetical protein 2226598..2227128 Rhizobium leguminosarum bv. trifolii WSM1325 8015657 YP_002976039.1 CDS Rleg_2223 NC_012850.1 2227151 2227798 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr1105 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2227151..2227798) Rhizobium leguminosarum bv. trifolii WSM1325 8013231 YP_002976040.1 CDS Rleg_2224 NC_012850.1 2227900 2228322 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH02373 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(2227900..2228322) Rhizobium leguminosarum bv. trifolii WSM1325 8013232 YP_002976041.1 CDS Rleg_2225 NC_012850.1 2228618 2230456 D PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: ret:RHE_CH02374 multidrug resistance ABC transporter, ATP-binding and permease protein; ABC transporter 2228618..2230456 Rhizobium leguminosarum bv. trifolii WSM1325 8015658 YP_002976042.1 CDS Rleg_2226 NC_012850.1 2230530 2231903 R KEGG: rec:RHECIAT_CH0002465 3-deoxy-7-phosphoheptulonate synthase protein, class II; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2230530..2231903) Rhizobium leguminosarum bv. trifolii WSM1325 8013233 YP_002976043.1 CDS Rleg_2227 NC_012850.1 2232123 2233412 D KEGG: ret:RHE_CH02376 hypothetical protein; hypothetical protein 2232123..2233412 Rhizobium leguminosarum bv. trifolii WSM1325 8013234 YP_002976044.1 CDS Rleg_2228 NC_012850.1 2233583 2234968 R catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase complement(2233583..2234968) Rhizobium leguminosarum bv. trifolii WSM1325 8015659 YP_002976045.1 CDS Rleg_2229 NC_012850.1 2235260 2235472 D KEGG: rec:RHECIAT_CH0002468 hypothetical protein; hypothetical protein 2235260..2235472 Rhizobium leguminosarum bv. trifolii WSM1325 8013235 YP_002976046.1 CDS Rleg_2230 NC_012850.1 2235530 2235826 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(2235530..2235826) Rhizobium leguminosarum bv. trifolii WSM1325 8013236 YP_002976047.1 CDS Rleg_2231 NC_012850.1 2235911 2236474 R KEGG: ret:RHE_CH02379 hypothetical protein; hypothetical protein complement(2235911..2236474) Rhizobium leguminosarum bv. trifolii WSM1325 8013237 YP_002976048.1 CDS Rleg_2232 NC_012850.1 2236490 2237188 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(2236490..2237188) Rhizobium leguminosarum bv. trifolii WSM1325 8013238 YP_002976049.1 CDS Rleg_2233 NC_012850.1 2237414 2238130 D catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 2237414..2238130 Rhizobium leguminosarum bv. trifolii WSM1325 8013239 YP_002976050.1 CDS Rleg_2234 NC_012850.1 2238231 2239439 R PFAM: Integrase catalytic region; KEGG: hne:HNE_3190 ISHne2, transposase; integrase catalytic subunit complement(2238231..2239439) Rhizobium leguminosarum bv. trifolii WSM1325 8013240 YP_002976051.1 CDS Rleg_2235 NC_012850.1 2239787 2241700 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding domain 1 protein; KEGG: rec:RHECIAT_CH0002473 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(2239787..2241700) Rhizobium leguminosarum bv. trifolii WSM1325 8013241 YP_002976052.1 CDS Rleg_2236 NC_012850.1 2241795 2241956 R hypothetical protein complement(2241795..2241956) Rhizobium leguminosarum bv. trifolii WSM1325 8013242 YP_002976053.1 CDS fumC NC_012850.1 2242123 2243514 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2242123..2243514 Rhizobium leguminosarum bv. trifolii WSM1325 8013243 YP_002976054.1 CDS Rleg_2238 NC_012850.1 2243650 2244483 R KEGG: rec:RHECIAT_CH0002476 autoaggregation protein (adhering protein); autoaggregation protein complement(2243650..2244483) Rhizobium leguminosarum bv. trifolii WSM1325 8013244 YP_002976055.1 CDS Rleg_2239 NC_012850.1 2244739 2246346 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: rec:RHECIAT_CH0002477 fumarate hydratase protein, class I; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 2244739..2246346 Rhizobium leguminosarum bv. trifolii WSM1325 8013245 YP_002976056.1 CDS Rleg_2240 NC_012850.1 2246366 2246572 R KEGG: rec:RHECIAT_CH0002478 hypothetical protein; hypothetical protein complement(2246366..2246572) Rhizobium leguminosarum bv. trifolii WSM1325 8013246 YP_002976057.1 CDS Rleg_2241 NC_012850.1 2246919 2247986 D KEGG: ret:RHE_CH02386 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 2246919..2247986 Rhizobium leguminosarum bv. trifolii WSM1325 8013247 YP_002976058.1 CDS Rleg_2242 NC_012850.1 2248235 2248846 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ret:RHE_CH02387 pyridoxine biosynthesis protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2248235..2248846) Rhizobium leguminosarum bv. trifolii WSM1325 8015660 YP_002976059.1 CDS Rleg_2243 NC_012850.1 2248884 2249864 R KEGG: rec:RHECIAT_CH0002481 hypothetical protein; hypothetical protein complement(2248884..2249864) Rhizobium leguminosarum bv. trifolii WSM1325 8013248 YP_002976060.1 CDS Rleg_2244 NC_012850.1 2249912 2250379 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0002482 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator 2249912..2250379 Rhizobium leguminosarum bv. trifolii WSM1325 8013249 YP_002976061.1 CDS Rleg_2245 NC_012850.1 2250383 2251573 R PFAM: low temperature requirement A; KEGG: rec:RHECIAT_CH0002483 hypothetical conserved membrane protein; low temperature requirement A complement(2250383..2251573) Rhizobium leguminosarum bv. trifolii WSM1325 8015661 YP_002976062.1 CDS Rleg_2246 NC_012850.1 2251633 2252010 R PFAM: protein of unknown function DUF971; KEGG: ret:RHE_CH02391 hypothetical protein; hypothetical protein complement(2251633..2252010) Rhizobium leguminosarum bv. trifolii WSM1325 8013250 YP_002976063.1 CDS moaA NC_012850.1 2252144 2253190 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2252144..2253190 Rhizobium leguminosarum bv. trifolii WSM1325 8013251 YP_002976064.1 CDS Rleg_2248 NC_012850.1 2253343 2254128 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: rec:RHECIAT_CH0002486 probable ubiquinone/menaquinone biosynthesis methyltransferase protein; type 11 methyltransferase complement(2253343..2254128) Rhizobium leguminosarum bv. trifolii WSM1325 8015662 YP_002976065.1 CDS Rleg_2249 NC_012850.1 2254244 2255380 D PFAM: periplasmic binding protein; KEGG: rec:RHECIAT_CH0002487 iron ABC transporter, substrate-binding protein; periplasmic binding protein 2254244..2255380 Rhizobium leguminosarum bv. trifolii WSM1325 8013252 YP_002976066.1 CDS Rleg_2250 NC_012850.1 2255387 2256457 D PFAM: transport system permease protein; KEGG: rec:RHECIAT_CH0002488 iron ABC transporter, permease protein; ABC transporter permease 2255387..2256457 Rhizobium leguminosarum bv. trifolii WSM1325 8013253 YP_002976067.1 CDS Rleg_2251 NC_012850.1 2256451 2257203 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002489 iron ABC transporter, ATP-binding protein; ABC transporter 2256451..2257203 Rhizobium leguminosarum bv. trifolii WSM1325 8013254 YP_002976068.1 CDS Rleg_2252 NC_012850.1 2257225 2258175 R PFAM: sugar-binding domain protein; KEGG: rec:RHECIAT_CH0002490 probable transcriptional regulator protein; DeoR family transcriptional regulator complement(2257225..2258175) Rhizobium leguminosarum bv. trifolii WSM1325 8013255 YP_002976069.1 CDS Rleg_2253 NC_012850.1 2258197 2259663 R PFAM: carbohydrate kinase FGGY; KEGG: ret:RHE_CH02396 glycerol kinase protein; carbohydrate kinase FGGY complement(2258197..2259663) Rhizobium leguminosarum bv. trifolii WSM1325 8013256 YP_002976070.1 CDS Rleg_2254 NC_012850.1 2259732 2260688 R PFAM: transketolase domain protein; transketolase central region; KEGG: rec:RHECIAT_CH0002492 transketolase protein, C-terminal subunit; transketolase complement(2259732..2260688) Rhizobium leguminosarum bv. trifolii WSM1325 8013257 YP_002976071.1 CDS Rleg_2255 NC_012850.1 2260688 2261497 R PFAM: transketolase domain protein; KEGG: atc:AGR_C_3490 probable transketolase; transketolase complement(2260688..2261497) Rhizobium leguminosarum bv. trifolii WSM1325 8013258 YP_002976072.1 CDS Rleg_2256 NC_012850.1 2261697 2262677 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0002494 ribose ABC transporter, permease protein; inner-membrane translocator 2261697..2262677 Rhizobium leguminosarum bv. trifolii WSM1325 8013259 YP_002976073.1 CDS Rleg_2257 NC_012850.1 2262795 2263724 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rec:RHECIAT_CH0002495 ribose ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 2262795..2263724 Rhizobium leguminosarum bv. trifolii WSM1325 8013260 YP_002976074.1 CDS Rleg_2258 NC_012850.1 2263753 2265231 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002496 ribose ABC transporter, ATP-binding protein; ABC transporter 2263753..2265231 Rhizobium leguminosarum bv. trifolii WSM1325 8013261 YP_002976075.1 CDS Rleg_2259 NC_012850.1 2265254 2266042 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH02402 short chain dehydrogenase; short chain dehydrogenase 2265254..2266042 Rhizobium leguminosarum bv. trifolii WSM1325 8013262 YP_002976076.1 CDS Rleg_2261 NC_012850.1 2266319 2267101 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH02403 short chain dehydrogenase protein; short-chain dehydrogenase/reductase SDR 2266319..2267101 Rhizobium leguminosarum bv. trifolii WSM1325 8013264 YP_002976077.1 CDS Rleg_2262 NC_012850.1 2267574 2268209 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: atc:AGR_C_3478 hypothetical protein; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2267574..2268209 Rhizobium leguminosarum bv. trifolii WSM1325 8013265 YP_002976078.1 CDS Rleg_2263 NC_012850.1 2268439 2269206 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH02404 short chain dehydrogenase; short chain dehydrogenase complement(2268439..2269206) Rhizobium leguminosarum bv. trifolii WSM1325 8013266 YP_002976079.1 CDS Rleg_2264 NC_012850.1 2269535 2270443 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH02405 hypothetical protein; hypothetical protein 2269535..2270443 Rhizobium leguminosarum bv. trifolii WSM1325 8013267 YP_002976080.1 CDS Rleg_2265 NC_012850.1 2270453 2271082 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: ret:RHE_CH02406 molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2270453..2271082 Rhizobium leguminosarum bv. trifolii WSM1325 8015663 YP_002976081.1 CDS Rleg_2266 NC_012850.1 2271079 2271600 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rec:RHECIAT_CH0002503 molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein MobB 2271079..2271600 Rhizobium leguminosarum bv. trifolii WSM1325 8013268 YP_002976082.1 CDS Rleg_2267 NC_012850.1 2271532 2273697 R KEGG: rec:RHECIAT_CH0002504 two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS/PAC sensor hybrid histidine kinase complement(2271532..2273697) Rhizobium leguminosarum bv. trifolii WSM1325 8013269 YP_002976083.1 CDS Rleg_2268 NC_012850.1 2273672 2275183 R KEGG: rec:RHECIAT_CH0002505 probable protein kinase protein; PFAM: KaiA binding; SMART: AAA ATPase; Non-specific serine/threonine protein kinase complement(2273672..2275183) Rhizobium leguminosarum bv. trifolii WSM1325 8015664 YP_002976084.1 CDS Rleg_2269 NC_012850.1 2275319 2276212 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002506 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(2275319..2276212) Rhizobium leguminosarum bv. trifolii WSM1325 8013270 YP_002976085.1 CDS Rleg_2270 NC_012850.1 2276346 2276741 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: rec:RHECIAT_CH0002507 hypothetical protein; cupin 2276346..2276741 Rhizobium leguminosarum bv. trifolii WSM1325 8013271 YP_002976086.1 CDS Rleg_2271 NC_012850.1 2276756 2277745 D PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0002508 aldo-keto reductase protein; aldo/keto reductase 2276756..2277745 Rhizobium leguminosarum bv. trifolii WSM1325 8013272 YP_002976087.1 CDS Rleg_2272 NC_012850.1 2277834 2278469 R KEGG: ret:RHE_CH02410 maleylpyruvate isomerase protein; TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase domain; maleylacetoacetate isomerase complement(2277834..2278469) Rhizobium leguminosarum bv. trifolii WSM1325 8013273 YP_002976088.1 CDS Rleg_2273 NC_012850.1 2278749 2279165 R PFAM: OsmC family protein; KEGG: rec:RHECIAT_CH0002510 probable stress-induced OsmC-like protein; OsmC family protein complement(2278749..2279165) Rhizobium leguminosarum bv. trifolii WSM1325 8013274 YP_002976089.1 CDS Rleg_2274 NC_012850.1 2279357 2280679 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0002511 probable two-component sensor histidine kinase protein; histidine kinase complement(2279357..2280679) Rhizobium leguminosarum bv. trifolii WSM1325 8013275 YP_002976090.1 CDS Rleg_2275 NC_012850.1 2280676 2281416 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0002512 probable two-component response regulator protein; transcriptional regulator complement(2280676..2281416) Rhizobium leguminosarum bv. trifolii WSM1325 8013276 YP_002976091.1 CDS Rleg_2276 NC_012850.1 2281540 2282589 R PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH02414 epoxide hydrolase protein; alpha/beta hydrolase complement(2281540..2282589) Rhizobium leguminosarum bv. trifolii WSM1325 8013277 YP_002976092.1 CDS Rleg_2277 NC_012850.1 2282940 2284715 D PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome C biogenesis protein transmembrane region; KEGG: rec:RHECIAT_CH0002514 cytochrome C biogenesis protein; redoxin domain-containing protein 2282940..2284715 Rhizobium leguminosarum bv. trifolii WSM1325 8013278 YP_002976093.1 CDS Rleg_2278 NC_012850.1 2284771 2285529 D KEGG: rec:RHECIAT_CH0002515 hydrolase protein; hydrolase protein 2284771..2285529 Rhizobium leguminosarum bv. trifolii WSM1325 8013279 YP_002976094.1 CDS Rleg_2279 NC_012850.1 2285932 2286654 D PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: sme:SM_b21299 transcriptional regulator, DeoR family protein; DeoR family transcriptional regulator 2285932..2286654 Rhizobium leguminosarum bv. trifolii WSM1325 8013280 YP_002976095.1 CDS Rleg_2280 NC_012850.1 2286891 2287859 D KEGG: sme:SM_b21300 deoxyribose-phosphate aldolase protein; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 2286891..2287859 Rhizobium leguminosarum bv. trifolii WSM1325 8013281 YP_002976096.1 CDS Rleg_2281 NC_012850.1 2287865 2290252 D PFAM: aldehyde Dehydrogenase; KEGG: sme:SM_b21301 putatively membrane-anchored aldehyde dehydrogenase protein; aldehyde dehydrogenase 2287865..2290252 Rhizobium leguminosarum bv. trifolii WSM1325 8013282 YP_002976097.1 CDS Rleg_2282 NC_012850.1 2290412 2290867 D PFAM: RbsD or FucU transport; KEGG: smd:Smed_4633 RbsD or FucU transport; transporter 2290412..2290867 Rhizobium leguminosarum bv. trifolii WSM1325 8015665 YP_002976098.1 CDS Rleg_2283 NC_012850.1 2290879 2291811 D TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: rbsK; ribokinase ; K00852 ribokinase; ribokinase 2290879..2291811 Rhizobium leguminosarum bv. trifolii WSM1325 8013283 YP_002976099.1 CDS Rleg_2284 NC_012850.1 2291808 2292683 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7824 ABC transporter permease protein; ABC transporter permease 2291808..2292683 Rhizobium leguminosarum bv. trifolii WSM1325 8015666 YP_002976100.1 CDS Rleg_2285 NC_012850.1 2292680 2293708 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7823 ABC transporter, permease protein; ABC transporter permease 2292680..2293708 Rhizobium leguminosarum bv. trifolii WSM1325 8013284 YP_002976101.1 CDS Rleg_2286 NC_012850.1 2293753 2295207 D PFAM: extracellular solute-binding protein family 1; KEGG: bbt:BBta_7822 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein 2293753..2295207 Rhizobium leguminosarum bv. trifolii WSM1325 8013285 YP_002976102.1 CDS Rleg_2287 NC_012850.1 2295424 2296512 D PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbt:BBta_7821 ABC transporter ATP-binding protein; ABC transporter 2295424..2296512 Rhizobium leguminosarum bv. trifolii WSM1325 8013286 YP_002976103.1 CDS Rleg_2288 NC_012850.1 2296787 2299006 R PFAM: OmpA/MotB domain protein; KEGG: rec:RHECIAT_CH0002516 outer membrane protein, OmpA family; OmpA/MotB domain-containing protein complement(2296787..2299006) Rhizobium leguminosarum bv. trifolii WSM1325 8013287 YP_002976104.1 CDS Rleg_2289 NC_012850.1 2299338 2300111 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: rec:RHECIAT_CH0002517 probable amino acid ABC transporter, substrate-binding protein; family 3 extracellular solute-binding protein 2299338..2300111 Rhizobium leguminosarum bv. trifolii WSM1325 8013288 YP_002976105.1 CDS Rleg_2290 NC_012850.1 2300225 2301031 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02419 amino acid ABC transporter permease; polar amino acid ABC transcriptional regulator inner membrane protein 2300225..2301031 Rhizobium leguminosarum bv. trifolii WSM1325 8013289 YP_002976106.1 CDS Rleg_2291 NC_012850.1 2301028 2301858 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002519 probable amino acid ABC transporter, permease protein; polar amino acid ABC transcriptional regulator inner membrane protein 2301028..2301858 Rhizobium leguminosarum bv. trifolii WSM1325 8013290 YP_002976107.1 CDS Rleg_2292 NC_012850.1 2302021 2302287 D PFAM: Usg family protein; KEGG: ret:RHE_CH02421 phosphoribosylanthranilate isomerase subunit Usg protein; Usg family protein 2302021..2302287 Rhizobium leguminosarum bv. trifolii WSM1325 8013291 YP_002976108.1 CDS Rleg_2293 NC_012850.1 2302352 2303077 R KEGG: ret:RHE_CH02422 hypothetical protein; hypothetical protein complement(2302352..2303077) Rhizobium leguminosarum bv. trifolii WSM1325 8013292 YP_002976109.1 CDS Rleg_2294 NC_012850.1 2303193 2304011 D PFAM: methyltransferase type 12; methyltransferase type 11; TPR repeat-containing protein; tetratricopeptide TPR_2 repeat protein; KEGG: rec:RHECIAT_CH0002522 methyltransferase protein; type 12 methyltransferase 2303193..2304011 Rhizobium leguminosarum bv. trifolii WSM1325 8013293 YP_002976110.1 CDS Rleg_2295 NC_012850.1 2304140 2304826 D PFAM: glutathione S-transferase domain; KEGG: rec:RHECIAT_CH0002523 glutathione S-transferase protein; glutathione S-transferase domain protein 2304140..2304826 Rhizobium leguminosarum bv. trifolii WSM1325 8013294 YP_002976111.1 CDS Rleg_2296 NC_012850.1 2304823 2305164 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rec:RHECIAT_CH0002524 probable transcriptional regulator protein, ArsR family; ArsR family transcriptional regulator 2304823..2305164 Rhizobium leguminosarum bv. trifolii WSM1325 8013295 YP_002976112.1 CDS Rleg_2297 NC_012850.1 2305161 2305637 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rec:RHECIAT_CH0002525 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 2305161..2305637 Rhizobium leguminosarum bv. trifolii WSM1325 8013296 YP_002976113.1 CDS Rleg_2298 NC_012850.1 2305716 2306183 R PFAM: Domain of unknown function DUF1801; KEGG: ret:RHE_CH02427 hypothetical protein; hypothetical protein complement(2305716..2306183) Rhizobium leguminosarum bv. trifolii WSM1325 8013297 YP_002976114.1 CDS Rleg_2299 NC_012850.1 2306283 2306753 R PFAM: Domain of unknown function DUF1801; KEGG: ret:RHE_CH02428 hypothetical protein; hypothetical protein complement(2306283..2306753) Rhizobium leguminosarum bv. trifolii WSM1325 8013298 YP_002976115.1 CDS Rleg_2300 NC_012850.1 2306765 2306986 R KEGG: ret:RHE_CH02429 hypothetical protein; hypothetical protein complement(2306765..2306986) Rhizobium leguminosarum bv. trifolii WSM1325 8013299 YP_002976116.1 CDS Rleg_2301 NC_012850.1 2307044 2307454 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rec:RHECIAT_CH0002528 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(2307044..2307454) Rhizobium leguminosarum bv. trifolii WSM1325 8013300 YP_002976117.1 CDS Rleg_2302 NC_012850.1 2307451 2307774 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rec:RHECIAT_CH0002529 probable transcriptional regulator protein, ArsR family; ArsR family transcriptional regulator complement(2307451..2307774) Rhizobium leguminosarum bv. trifolii WSM1325 8015667 YP_002976118.1 CDS Rleg_2303 NC_012850.1 2308023 2308850 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aliphatic sulphonate ABC transporter ; K02049 sulfonate/nitrate/taurine transport system ATP-binding protein; ABC transporter complement(2308023..2308850) Rhizobium leguminosarum bv. trifolii WSM1325 8013301 YP_002976119.1 CDS Rleg_2304 NC_012850.1 2308861 2309697 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aliphatic sulphonate ABC transporter ; K02050 sulfonate/nitrate/taurine transport system permease protein; ABC transporter permease complement(2308861..2309697) Rhizobium leguminosarum bv. trifolii WSM1325 8013302 YP_002976120.1 CDS Rleg_2305 NC_012850.1 2309784 2310971 R PFAM: Luciferase-like monooxygenase; KEGG: ret:RHE_CH02432 alkanesulfonate monooxygenase protein; Alkanesulfonate monooxygenase complement(2309784..2310971) Rhizobium leguminosarum bv. trifolii WSM1325 8015668 YP_002976121.1 CDS Rleg_2306 NC_012850.1 2311350 2312384 R KEGG: aliphatic sulfonate substrate binding component of ABC transporter ; K02051 sulfonate/nitrate/taurine transport system substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein complement(2311350..2312384) Rhizobium leguminosarum bv. trifolii WSM1325 8013303 YP_002976122.1 CDS Rleg_2307 NC_012850.1 2312514 2312882 R KEGG: rec:RHECIAT_CH0002530 hypothetical protein; hypothetical protein complement(2312514..2312882) Rhizobium leguminosarum bv. trifolii WSM1325 8013304 YP_002976123.1 CDS Rleg_2309 NC_012850.1 2313047 2313916 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; oxidoreductase domain protein; KEGG: ret:RHE_CH02433 3-hydroxyisobutyrate dehydrogenase protein; 6-phosphogluconate dehydrogenase 2313047..2313916 Rhizobium leguminosarum bv. trifolii WSM1325 8013305 YP_002976124.1 CDS Rleg_2310 NC_012850.1 2313913 2314596 D KEGG: ret:RHE_CH02434 hypothetical protein; hypothetical protein 2313913..2314596 Rhizobium leguminosarum bv. trifolii WSM1325 8013306 YP_002976125.1 CDS Rleg_2311 NC_012850.1 2314894 2315790 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_1707 transcriptional regulator; LysR family transcriptional regulator complement(2314894..2315790) Rhizobium leguminosarum bv. trifolii WSM1325 8013307 YP_002976126.1 CDS Rleg_2312 NC_012850.1 2316238 2317260 R PFAM: porin; KEGG: rec:RHECIAT_CH0002537 porin outer membrane protein; porin complement(2316238..2317260) Rhizobium leguminosarum bv. trifolii WSM1325 8013308 YP_002976127.1 CDS Rleg_2313 NC_012850.1 2317966 2318454 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_CH0002539 probable transcriptional regulator protein, AsnC family; AsnC family transcriptional regulator complement(2317966..2318454) Rhizobium leguminosarum bv. trifolii WSM1325 8013309 YP_002976128.1 CDS Rleg_2314 NC_012850.1 2318524 2319156 R KEGG: ret:RHE_CH02439 uracil-DNA glycosylase protein; uracil-DNA glycosylase complement(2318524..2319156) Rhizobium leguminosarum bv. trifolii WSM1325 8013310 YP_002976129.1 CDS Rleg_2315 NC_012850.1 2319161 2319718 R PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: rec:RHECIAT_CH0002541 succinoglycan biosynthesis protein; nuclease complement(2319161..2319718) Rhizobium leguminosarum bv. trifolii WSM1325 8013311 YP_002976130.1 CDS Rleg_2316 NC_012850.1 2319825 2321360 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rec:RHECIAT_CH0002542 probable two-component sensor histidine kinase protein; histidine kinase 2319825..2321360 Rhizobium leguminosarum bv. trifolii WSM1325 8013312 YP_002976131.1 CDS Rleg_2317 NC_012850.1 2321362 2321742 R PFAM: diacylglycerol kinase; KEGG: rec:RHECIAT_CH0002543 diacylglycerol kinase protein; diacylglycerol kinase complement(2321362..2321742) Rhizobium leguminosarum bv. trifolii WSM1325 8013313 YP_002976132.1 CDS cobT NC_012850.1 2321872 2322888 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2321872..2322888) Rhizobium leguminosarum bv. trifolii WSM1325 8013314 YP_002976133.1 CDS cobS NC_012850.1 2323045 2323827 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 2323045..2323827 Rhizobium leguminosarum bv. trifolii WSM1325 8013315 YP_002976134.1 CDS Rleg_2320 NC_012850.1 2323846 2324064 D PFAM: protein of unknown function DUF1289; KEGG: ret:RHE_CH02445 hypothetical protein; hypothetical protein 2323846..2324064 Rhizobium leguminosarum bv. trifolii WSM1325 8013316 YP_002976135.1 CDS Rleg_2321 NC_012850.1 2324061 2324762 D KEGG: rec:RHECIAT_CH0002547 hypothetical protein; hypothetical protein 2324061..2324762 Rhizobium leguminosarum bv. trifolii WSM1325 8013317 YP_002976136.1 CDS Rleg_2322 NC_012850.1 2325028 2325465 D KEGG: ret:RHE_CH02448 hypothetical protein; hypothetical protein 2325028..2325465 Rhizobium leguminosarum bv. trifolii WSM1325 8015670 YP_002976137.1 CDS Rleg_2323 NC_012850.1 2325566 2326489 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH02449 LysR family transcriptional regulator; LysR family transcriptional regulator 2325566..2326489 Rhizobium leguminosarum bv. trifolii WSM1325 8013318 YP_002976138.1 CDS Rleg_2324 NC_012850.1 2326452 2327189 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0002552 probable short-chain dehydrogenase protein; short chain dehydrogenase complement(2326452..2327189) Rhizobium leguminosarum bv. trifolii WSM1325 8015671 YP_002976139.1 CDS Rleg_2326 NC_012850.1 2328092 2328853 R PFAM: ABC transporter; KEGG: rec:RHECIAT_CH0002553 multidrug ABC transporter, permease protein; ABC transporter complement(2328092..2328853) Rhizobium leguminosarum bv. trifolii WSM1325 8013320 YP_002976140.1 CDS Rleg_2327 NC_012850.1 2328850 2329776 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH02452 multidrug ABC transporter, ATP-binding protein; ABC transporter complement(2328850..2329776) Rhizobium leguminosarum bv. trifolii WSM1325 8015672 YP_002976141.1 CDS Rleg_2328 NC_012850.1 2330012 2330119 R hypothetical protein complement(2330012..2330119) Rhizobium leguminosarum bv. trifolii WSM1325 8013321 YP_002976142.1 CDS Rleg_2329 NC_012850.1 2330296 2331909 R PFAM: glycoside hydrolase family 43; KEGG: ret:RHE_CH02453 beta-xylosidase protein; xylan 1,4-beta-xylosidase complement(2330296..2331909) Rhizobium leguminosarum bv. trifolii WSM1325 8013322 YP_002976143.1 CDS Rleg_2330 NC_012850.1 2332004 2333035 R PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0002557 probable oxidoreductase protein; aldo/keto reductase complement(2332004..2333035) Rhizobium leguminosarum bv. trifolii WSM1325 8013323 YP_002976144.1 CDS Rleg_2331 NC_012850.1 2333394 2334527 R PFAM: oxidoreductase domain protein; KEGG: rec:RHECIAT_CH0002558 probable oxidoreductase protein; oxidoreductase domain-containing protein complement(2333394..2334527) Rhizobium leguminosarum bv. trifolii WSM1325 8013324 YP_002976145.1 CDS Rleg_2332 NC_012850.1 2334537 2335298 R PFAM: xylose isomerase; KEGG: rec:RHECIAT_CH0002559 xylose isomerase domain protein; xylose isomerase complement(2334537..2335298) Rhizobium leguminosarum bv. trifolii WSM1325 8013325 YP_002976146.1 CDS Rleg_2333 NC_012850.1 2335336 2337795 R KEGG: rec:RHECIAT_CH0002560 beta-mannosidase protein; beta-mannosidase complement(2335336..2337795) Rhizobium leguminosarum bv. trifolii WSM1325 8013326 YP_002976147.1 CDS Rleg_2334 NC_012850.1 2338023 2339114 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002561 probable sugar ABC transporter, ATP-binding protein; ABC transporter complement(2338023..2339114) Rhizobium leguminosarum bv. trifolii WSM1325 8013327 YP_002976148.1 CDS Rleg_2335 NC_012850.1 2339119 2340063 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter ; K02026 multiple sugar transport system permease protein; ABC transporter permease complement(2339119..2340063) Rhizobium leguminosarum bv. trifolii WSM1325 8013328 YP_002976149.1 CDS Rleg_2336 NC_012850.1 2340056 2340961 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002563 probable sugar ABC transporter, permease protein; ABC transporter permease complement(2340056..2340961) Rhizobium leguminosarum bv. trifolii WSM1325 8013329 YP_002976150.1 CDS Rleg_2337 NC_012850.1 2341145 2342380 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0002564 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(2341145..2342380) Rhizobium leguminosarum bv. trifolii WSM1325 8013330 YP_002976151.1 CDS Rleg_2338 NC_012850.1 2342834 2343877 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_CH0002565 probable transcriptional regulator protein, LacI family; LacI family transcriptional regulator 2342834..2343877 Rhizobium leguminosarum bv. trifolii WSM1325 8013331 YP_002976152.1 CDS Rleg_2339 NC_012850.1 2343935 2346451 R TIGRFAM: leucyl-tRNA synthetase; KEGG: bcy:Bcer98_3415 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(2343935..2346451) Rhizobium leguminosarum bv. trifolii WSM1325 8013332 YP_002976153.1 CDS Rleg_2340 NC_012850.1 2346846 2347754 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002059 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(2346846..2347754) Rhizobium leguminosarum bv. trifolii WSM1325 8013333 YP_002976154.1 CDS Rleg_2341 NC_012850.1 2347929 2348543 D KEGG: ret:RHE_CH02463 hypothetical protein; hypothetical protein 2347929..2348543 Rhizobium leguminosarum bv. trifolii WSM1325 8015673 YP_002976155.1 CDS ddl NC_012850.1 2348578 2349654 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 2348578..2349654 Rhizobium leguminosarum bv. trifolii WSM1325 8013334 YP_002976156.1 CDS Rleg_2343 NC_012850.1 2349670 2350215 D KEGG: ret:RHE_CH02465 hypothetical protein; hypothetical protein 2349670..2350215 Rhizobium leguminosarum bv. trifolii WSM1325 8013335 YP_002976157.1 CDS Rleg_2344 NC_012850.1 2350259 2350876 R PFAM: methyltransferase type 12; KEGG: rec:RHECIAT_CH0002568 hypothetical protein; type 12 methyltransferase complement(2350259..2350876) Rhizobium leguminosarum bv. trifolii WSM1325 8015674 YP_002976158.1 CDS Rleg_2346 NC_012850.1 2351543 2352037 R PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase protein ; K03824 acetyltransferase; N-acetyltransferase GCN5 complement(2351543..2352037) Rhizobium leguminosarum bv. trifolii WSM1325 8013337 YP_002976159.1 CDS Rleg_2347 NC_012850.1 2352289 2352666 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cak:Caul_3749 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2352289..2352666 Rhizobium leguminosarum bv. trifolii WSM1325 8015675 YP_002976160.1 CDS Rleg_2348 NC_012850.1 2352742 2353506 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2352742..2353506) Rhizobium leguminosarum bv. trifolii WSM1325 8013338 YP_002976161.1 CDS Rleg_2349 NC_012850.1 2353591 2355021 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(2353591..2355021) Rhizobium leguminosarum bv. trifolii WSM1325 8013339 YP_002976162.1 CDS Rleg_2350 NC_012850.1 2355254 2356045 D SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH02469 AraC family transcriptional regulator; AraC family transcriptional regulator 2355254..2356045 Rhizobium leguminosarum bv. trifolii WSM1325 8013340 YP_002976163.1 CDS Rleg_2351 NC_012850.1 2356116 2356514 D KEGG: rec:RHECIAT_CH0002572 hypothetical protein; hypothetical protein 2356116..2356514 Rhizobium leguminosarum bv. trifolii WSM1325 8013341 YP_002976164.1 CDS Rleg_2352 NC_012850.1 2356515 2356877 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0002573 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 2356515..2356877 Rhizobium leguminosarum bv. trifolii WSM1325 8013342 YP_002976165.1 CDS Rleg_2353 NC_012850.1 2356933 2357649 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: rec:RHECIAT_CH0002574 hypothetical protein; PAS/PAC sensor protein complement(2356933..2357649) Rhizobium leguminosarum bv. trifolii WSM1325 8013343 YP_002976166.1 CDS Rleg_2354 NC_012850.1 2357912 2358847 R acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(2357912..2358847) Rhizobium leguminosarum bv. trifolii WSM1325 8013344 YP_002976167.1 CDS Rleg_2355 NC_012850.1 2358852 2359880 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_CH0002576 probable alcohol dehydrogenase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(2358852..2359880) Rhizobium leguminosarum bv. trifolii WSM1325 8013345 YP_002976168.1 CDS Rleg_2356 NC_012850.1 2359937 2361223 R FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II complement(2359937..2361223) Rhizobium leguminosarum bv. trifolii WSM1325 8013346 YP_002976169.1 CDS Rleg_2357 NC_012850.1 2361236 2362441 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(2361236..2362441) Rhizobium leguminosarum bv. trifolii WSM1325 8013347 YP_002976170.1 CDS Rleg_2358 NC_012850.1 2362438 2362920 R PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rec:RHECIAT_CH0002579 probable hydroxymyristoyl-[acyl-carrier-protein] dehydratase protein; 3-hydroxyacyl-ACP dehydratase complement(2362438..2362920) Rhizobium leguminosarum bv. trifolii WSM1325 8013348 YP_002976171.1 CDS Rleg_2359 NC_012850.1 2363124 2363441 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(2363124..2363441) Rhizobium leguminosarum bv. trifolii WSM1325 8013349 YP_002976172.1 CDS Rleg_2360 NC_012850.1 2363835 2364557 D PFAM: regulatory protein Crp; cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: rec:RHECIAT_CH0002581 transcriptional regulator protein, Fnr/CRP family; Crp/Fnr family transcriptional regulator 2363835..2364557 Rhizobium leguminosarum bv. trifolii WSM1325 8013350 YP_002976173.1 CDS Rleg_2361 NC_012850.1 2364644 2365072 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0002582 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(2364644..2365072) Rhizobium leguminosarum bv. trifolii WSM1325 8013351 YP_002976174.1 CDS Rleg_2362 NC_012850.1 2365212 2365412 R KEGG: rec:RHECIAT_CH0002583 hypothetical protein; hypothetical protein complement(2365212..2365412) Rhizobium leguminosarum bv. trifolii WSM1325 8013352 YP_002976175.1 CDS cobD NC_012850.1 2365506 2366486 R CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein complement(2365506..2366486) Rhizobium leguminosarum bv. trifolii WSM1325 8013353 YP_002976176.1 CDS Rleg_2364 NC_012850.1 2366483 2367505 R TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: rec:RHECIAT_CH0002585 cobalamin biosynthesis protein, pyridoxal-phosphate-dependent aminotransferase protein; L-threonine-O-3-phosphate decarboxylase complement(2366483..2367505) Rhizobium leguminosarum bv. trifolii WSM1325 8013354 YP_002976177.1 CDS Rleg_2365 NC_012850.1 2367502 2368812 R responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase complement(2367502..2368812) Rhizobium leguminosarum bv. trifolii WSM1325 8013355 YP_002976178.1 CDS Rleg_2366 NC_012850.1 2368809 2369648 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ret:RHE_CH02484 uroporphyrin-III C-methyltransferase protein; uroporphyrin-III C-methyltransferase complement(2368809..2369648) Rhizobium leguminosarum bv. trifolii WSM1325 8013356 YP_002976179.1 CDS Rleg_2367 NC_012850.1 2369834 2370787 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ret:RHE_CH02485 inosine-uridine preferring nucleoside hydrolase protein; inosine/uridine-preferring nucleoside hydrolase complement(2369834..2370787) Rhizobium leguminosarum bv. trifolii WSM1325 8013357 YP_002976180.1 CDS Rleg_2368 NC_012850.1 2370858 2371289 R KEGG: rec:RHECIAT_CH0002589 probable precorrin-3B C17-methyltransferase protein; precorrin-3B C17-methyltransferase protein complement(2370858..2371289) Rhizobium leguminosarum bv. trifolii WSM1325 8013358 YP_002976181.1 CDS Rleg_2370 NC_012850.1 2371891 2372541 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(2371891..2372541) Rhizobium leguminosarum bv. trifolii WSM1325 8013360 YP_002976182.1 CDS cobN NC_012850.1 2372538 2376704 R with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN complement(2372538..2376704) Rhizobium leguminosarum bv. trifolii WSM1325 8013361 YP_002976183.1 CDS Rleg_2372 NC_012850.1 2376709 2377758 R TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rec:RHECIAT_CH0002593 cobalamin biosynthesis protein; cobalamin biosynthesis protein CobW complement(2376709..2377758) Rhizobium leguminosarum bv. trifolii WSM1325 8013362 YP_002976184.1 CDS cobU NC_012850.1 2377763 2378272 R catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase complement(2377763..2378272) Rhizobium leguminosarum bv. trifolii WSM1325 8015676 YP_002976185.1 CDS Rleg_2374 NC_012850.1 2379305 2381095 D PFAM: Chloride channel core; KEGG: rec:RHECIAT_CH0002596 chloride channel protein; chloride channel protein 2379305..2381095 Rhizobium leguminosarum bv. trifolii WSM1325 8013363 YP_002976186.1 CDS Rleg_2375 NC_012850.1 2381117 2382163 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rec:RHECIAT_CH0002597 probable adenylate cyclase protein; adenylate/guanylate cyclase complement(2381117..2382163) Rhizobium leguminosarum bv. trifolii WSM1325 8015677 YP_002976187.1 CDS Rleg_2376 NC_012850.1 2382515 2382736 R PFAM: protein of unknown function DUF1127; hypothetical protein complement(2382515..2382736) Rhizobium leguminosarum bv. trifolii WSM1325 8013364 YP_002976188.1 CDS Rleg_2377 NC_012850.1 2382826 2383098 R KEGG: pca:Pcar_1705 hypothetical protein; hypothetical protein complement(2382826..2383098) Rhizobium leguminosarum bv. trifolii WSM1325 8013365 YP_002976189.1 CDS Rleg_2378 NC_012850.1 2383141 2383626 R KEGG: mlo:mll1853 hypothetical protein; hypothetical protein complement(2383141..2383626) Rhizobium leguminosarum bv. trifolii WSM1325 8013366 YP_002976190.1 CDS Rleg_2379 NC_012850.1 2383813 2384946 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: nwsB; two-component response regulator protein (NodW mutant supressor protein); LuxR family transcriptional regulator 2383813..2384946 Rhizobium leguminosarum bv. trifolii WSM1325 8013367 YP_002976191.1 CDS Rleg_2380 NC_012850.1 2385026 2385796 R Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase complement(2385026..2385796) Rhizobium leguminosarum bv. trifolii WSM1325 8013368 YP_002976192.1 CDS Rleg_2381 NC_012850.1 2385919 2387385 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(2385919..2387385) Rhizobium leguminosarum bv. trifolii WSM1325 8013369 YP_002976193.1 CDS Rleg_2382 NC_012850.1 2388009 2389004 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ret:RHE_CH02495 amino acid ABC transporter, substrate-binding protein; glycine/betaine ABC transporter substrate-binding protein 2388009..2389004 Rhizobium leguminosarum bv. trifolii WSM1325 8013370 YP_002976194.1 CDS Rleg_2383 NC_012850.1 2389037 2389387 D KEGG: ret:RHE_CH02496 hypothetical protein; hypothetical protein 2389037..2389387 Rhizobium leguminosarum bv. trifolii WSM1325 8013371 YP_002976195.1 CDS Rleg_2384 NC_012850.1 2389463 2389618 R PFAM: Entericidin EcnAB; KEGG: rec:RHECIAT_CH0002602 entericidin B signal peptide protein; entericidin EcnAB complement(2389463..2389618) Rhizobium leguminosarum bv. trifolii WSM1325 8013372 YP_002976196.1 CDS Rleg_2385 NC_012850.1 2389788 2390729 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002603 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(2389788..2390729) Rhizobium leguminosarum bv. trifolii WSM1325 8015678 YP_002976197.1 CDS Rleg_2386 NC_012850.1 2390803 2390991 D KEGG: rec:RHECIAT_CH0002604 hypothetical protein; hypothetical protein 2390803..2390991 Rhizobium leguminosarum bv. trifolii WSM1325 8013373 YP_002976198.1 CDS Rleg_2387 NC_012850.1 2391090 2391698 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0002605 probable amino acid efflux protein, LysE family; lysine exporter protein LysE/YggA complement(2391090..2391698) Rhizobium leguminosarum bv. trifolii WSM1325 8013374 YP_002976199.1 CDS Rleg_2388 NC_012850.1 2391799 2392692 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 2391799..2392692 Rhizobium leguminosarum bv. trifolii WSM1325 8013375 YP_002976200.1 CDS Rleg_2389 NC_012850.1 2392741 2393100 R KEGG: rec:RHECIAT_CH0002844 hypothetical protein; hypothetical protein complement(2392741..2393100) Rhizobium leguminosarum bv. trifolii WSM1325 8013376 YP_002976201.1 CDS Rleg_2390 NC_012850.1 2393210 2393692 R activates RNA polymerase to cleave back-tracked RNA during elongational pausing; transcription elongation factor regulatory protein complement(2393210..2393692) Rhizobium leguminosarum bv. trifolii WSM1325 8015679 YP_002976202.1 CDS Rleg_2391 NC_012850.1 2393905 2394090 R KEGG: rec:RHECIAT_CH0002609 hypothetical protein; hypothetical protein complement(2393905..2394090) Rhizobium leguminosarum bv. trifolii WSM1325 8013377 YP_002976203.1 CDS Rleg_2392 NC_012850.1 2394129 2394338 R KEGG: rec:RHECIAT_CH0002610 hypothetical protein; hypothetical protein complement(2394129..2394338) Rhizobium leguminosarum bv. trifolii WSM1325 8013378 YP_002976204.1 CDS Rleg_2393 NC_012850.1 2394446 2394679 R KEGG: ret:RHE_CH02503 hypothetical protein; hypothetical protein complement(2394446..2394679) Rhizobium leguminosarum bv. trifolii WSM1325 8013379 YP_002976205.1 CDS Rleg_2394 NC_012850.1 2394760 2395716 R KEGG: smd:Smed_3788 hypothetical protein; hypothetical protein complement(2394760..2395716) Rhizobium leguminosarum bv. trifolii WSM1325 8013380 YP_002976206.1 CDS Rleg_2395 NC_012850.1 2395737 2397104 R KEGG: sme:SMa0690 hypothetical protein; hypothetical protein complement(2395737..2397104) Rhizobium leguminosarum bv. trifolii WSM1325 8015680 YP_002976207.1 CDS Rleg_2396 NC_012850.1 2397197 2398225 R KEGG: smd:Smed_5667 transmembrane protein; transmembrane protein complement(2397197..2398225) Rhizobium leguminosarum bv. trifolii WSM1325 8013381 YP_002976208.1 CDS Rleg_2397 NC_012850.1 2398215 2399321 R PFAM: secretion protein HlyD family protein; KEGG: smd:Smed_5668 secretion protein HlyD family protein; secretion protein HlyD family protein complement(2398215..2399321) Rhizobium leguminosarum bv. trifolii WSM1325 8013382 YP_002976209.1 CDS Rleg_2398 NC_012850.1 2399474 2399731 R KEGG: smd:Smed_4883 hypothetical protein; hypothetical protein complement(2399474..2399731) Rhizobium leguminosarum bv. trifolii WSM1325 8013383 YP_002976210.1 CDS Rleg_2399 NC_012850.1 2399878 2401698 D KEGG: sme:SMa0601 hypothetical protein; hypothetical protein 2399878..2401698 Rhizobium leguminosarum bv. trifolii WSM1325 8013384 YP_002976211.1 CDS Rleg_2400 NC_012850.1 2401842 2403257 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: smd:Smed_4880 protein of unknown function DUF900 hydrolase family protein; hypothetical protein 2401842..2403257 Rhizobium leguminosarum bv. trifolii WSM1325 8013385 YP_002976212.1 CDS Rleg_2401 NC_012850.1 2403308 2405464 D PFAM: MscS Mechanosensitive ion channel; KEGG: smd:Smed_3001 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2403308..2405464 Rhizobium leguminosarum bv. trifolii WSM1325 8013386 YP_002976213.1 CDS Rleg_2402 NC_012850.1 2405519 2405923 D KEGG: nha:Nham_2986 hypothetical protein; hypothetical protein 2405519..2405923 Rhizobium leguminosarum bv. trifolii WSM1325 8013387 YP_002976214.1 CDS Rleg_2403 NC_012850.1 2406030 2406677 D PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: nmn:NMCC_1265 hypothetical protein; multiple antibiotic resistance (MarC)-like protein 2406030..2406677 Rhizobium leguminosarum bv. trifolii WSM1325 8013388 YP_002976215.1 CDS Rleg_2404 NC_012850.1 2407019 2407219 D KEGG: rec:RHECIAT_CH0002614 hypothetical protein; hypothetical protein 2407019..2407219 Rhizobium leguminosarum bv. trifolii WSM1325 8013389 YP_002976216.1 CDS Rleg_2405 NC_012850.1 2407406 2410198 R PFAM: type III restriction protein res subunit; DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase; KEGG: rec:RHECIAT_CH0002615 hypothetical protein; type III restriction protein res subunit complement(2407406..2410198) Rhizobium leguminosarum bv. trifolii WSM1325 8013390 YP_002976217.1 CDS Rleg_2406 NC_012850.1 2410666 2411685 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0002616 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator 2410666..2411685 Rhizobium leguminosarum bv. trifolii WSM1325 8013391 YP_002976218.1 CDS Rleg_2407 NC_012850.1 2411723 2413054 R KEGG: ret:RHE_CH02526 two-component response regulator protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase complement(2411723..2413054) Rhizobium leguminosarum bv. trifolii WSM1325 8015681 YP_002976219.1 CDS Rleg_2408 NC_012850.1 2413241 2414071 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0002618 two-component response regulator protein; response regulator receiver protein complement(2413241..2414071) Rhizobium leguminosarum bv. trifolii WSM1325 8013392 YP_002976220.1 CDS Rleg_2409 NC_012850.1 2414160 2414483 D hypothetical protein 2414160..2414483 Rhizobium leguminosarum bv. trifolii WSM1325 8013393 YP_002976221.1 CDS Rleg_2410 NC_012850.1 2414480 2415463 D KEGG: ret:RHE_CH02529 hypothetical protein; hypothetical protein 2414480..2415463 Rhizobium leguminosarum bv. trifolii WSM1325 8013394 YP_002976222.1 CDS Rleg_2411 NC_012850.1 2415449 2416066 R PFAM: regulatory protein TetR; KEGG: oan:Oant_0432 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2415449..2416066) Rhizobium leguminosarum bv. trifolii WSM1325 8013395 YP_002976223.1 CDS Rleg_2412 NC_012850.1 2416080 2416583 R PFAM: DinB family protein; KEGG: cvi:CV_0712 hypothetical protein; DinB family protein complement(2416080..2416583) Rhizobium leguminosarum bv. trifolii WSM1325 8015682 YP_002976224.1 CDS Rleg_2413 NC_012850.1 2416715 2417260 R KEGG: mrd:Mrad2831_1376 hypothetical protein; hypothetical protein complement(2416715..2417260) Rhizobium leguminosarum bv. trifolii WSM1325 8015683 YP_002976225.1 CDS Rleg_2414 NC_012850.1 2417282 2417638 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ret:RHE_CH02531 ArsR family transcriptional regulator; ArsR family transcriptional regulator 2417282..2417638 Rhizobium leguminosarum bv. trifolii WSM1325 8013396 YP_002976226.1 CDS Rleg_2415 NC_012850.1 2417635 2418165 D PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: rec:RHECIAT_CH0002621 protein-tyrosine-phosphatase protein; protein-tyrosine phosphatase, low molecular weight 2417635..2418165 Rhizobium leguminosarum bv. trifolii WSM1325 8013397 YP_002976227.1 CDS Rleg_2416 NC_012850.1 2418165 2418608 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsq:Rsph17025_1405 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2418165..2418608 Rhizobium leguminosarum bv. trifolii WSM1325 8013398 YP_002976228.1 CDS Rleg_2417 NC_012850.1 2418605 2419312 D PFAM: major intrinsic protein; KEGG: mes:Meso_4200 major intrinsic protein; major intrinsic protein 2418605..2419312 Rhizobium leguminosarum bv. trifolii WSM1325 8013399 YP_002976229.1 CDS Rleg_2418 NC_012850.1 2419309 2419737 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ret:RHE_CH02534 arsenate reductase protein; arsenate reductase 2419309..2419737 Rhizobium leguminosarum bv. trifolii WSM1325 8013400 YP_002976230.1 CDS Rleg_2419 NC_012850.1 2419712 2420437 D TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: atc:AGR_pAT_462 hypothetical protein; arsenical resistance protein ArsH 2419712..2420437 Rhizobium leguminosarum bv. trifolii WSM1325 8013401 YP_002976231.1 CDS Rleg_2420 NC_012850.1 2420434 2421669 D PFAM: major facilitator superfamily MFS_1; KEGG: transporter; major facilitator superfamily protein 2420434..2421669 Rhizobium leguminosarum bv. trifolii WSM1325 8013402 YP_002976232.1 CDS Rleg_2421 NC_012850.1 2421691 2421957 R KEGG: rec:RHECIAT_CH0002624 hypothetical protein; hypothetical protein complement(2421691..2421957) Rhizobium leguminosarum bv. trifolii WSM1325 8013403 YP_002976233.1 CDS Rleg_2422 NC_012850.1 2422070 2424604 R PFAM: MscS Mechanosensitive ion channel; KEGG: rec:RHECIAT_CH0002625 probable mechanosensitive channel protein; mechanosensitive ion channel protein MscS complement(2422070..2424604) Rhizobium leguminosarum bv. trifolii WSM1325 8013404 YP_002976234.1 CDS Rleg_2423 NC_012850.1 2424697 2425248 R PFAM: protein of unknown function DUF924; KEGG: ret:RHE_CH02538 hypothetical protein; hypothetical protein complement(2424697..2425248) Rhizobium leguminosarum bv. trifolii WSM1325 8013405 YP_002976235.1 CDS Rleg_2424 NC_012850.1 2425369 2426433 R PFAM: histidine kinase dimerisation/phosphoacceptor; response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: rec:RHECIAT_CH0002627 probable two-component sensor histidine kinase protein; signal transduction histidine kinase complement(2425369..2426433) Rhizobium leguminosarum bv. trifolii WSM1325 8013406 YP_002976236.1 CDS Rleg_2425 NC_012850.1 2426711 2428156 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0002628 probable transporter protein; major facilitator superfamily protein complement(2426711..2428156) Rhizobium leguminosarum bv. trifolii WSM1325 8013407 YP_002976237.1 CDS Rleg_2426 NC_012850.1 2428728 2430053 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0002629 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 2428728..2430053 Rhizobium leguminosarum bv. trifolii WSM1325 8013408 YP_002976238.1 CDS Rleg_2427 NC_012850.1 2430177 2431145 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002630 probable sugar ABC transporter, permease protein; ABC transporter permease 2430177..2431145 Rhizobium leguminosarum bv. trifolii WSM1325 8013409 YP_002976239.1 CDS Rleg_2428 NC_012850.1 2431142 2432095 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002631 probable sugar ABC transporter, permease protein; ABC transporter permease 2431142..2432095 Rhizobium leguminosarum bv. trifolii WSM1325 8013410 YP_002976240.1 CDS Rleg_2429 NC_012850.1 2432092 2432304 D KEGG: rec:RHECIAT_CH0002632 hypothetical protein; hypothetical protein 2432092..2432304 Rhizobium leguminosarum bv. trifolii WSM1325 8013411 YP_002976241.1 CDS Rleg_2430 NC_012850.1 2432308 2433405 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002633 probable sugar ABC transporter, ATP-binding protein; ABC transporter 2432308..2433405 Rhizobium leguminosarum bv. trifolii WSM1325 8013412 YP_002976242.1 CDS Rleg_2431 NC_012850.1 2433398 2434426 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002634 probable sugar ABC transporter, ATP-binding protein; ABC transporter 2433398..2434426 Rhizobium leguminosarum bv. trifolii WSM1325 8013413 YP_002976243.1 CDS Rleg_2432 NC_012850.1 2434480 2436123 D PFAM: Dak kinase; Dak phosphatase; KEGG: rec:RHECIAT_CH0002635 dihydroxyacetone kinase protein; Glycerone kinase 2434480..2436123 Rhizobium leguminosarum bv. trifolii WSM1325 8013414 YP_002976244.1 CDS Rleg_2433 NC_012850.1 2436176 2436790 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rec:RHECIAT_CH0002636 probable PTS-dependent dihydroxyacetone kinase protein, ADP-binding subunit; dihydroxyacetone kinase subunit DhaL 2436176..2436790 Rhizobium leguminosarum bv. trifolii WSM1325 8013415 YP_002976245.1 CDS Rleg_2434 NC_012850.1 2436787 2437185 D TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: rec:RHECIAT_CH0002637 probable PTS-dependent dihydroxyacetone kinase protein, phosphotransferase subunit; PTS system mannnose-specific transporter subunit IIA 2436787..2437185 Rhizobium leguminosarum bv. trifolii WSM1325 8013416 YP_002976246.1 CDS Rleg_2435 NC_012850.1 2437227 2437529 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: rec:RHECIAT_CH0002638 probable protein-N(pi)-phosphohistidine-sugar phosphotransferase protein (enzyme II of the phosphotransferase system); phosphotransferase system, phosphocarrier protein HPr 2437227..2437529 Rhizobium leguminosarum bv. trifolii WSM1325 8013417 YP_002976247.1 CDS Rleg_2436 NC_012850.1 2437513 2439117 D PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: rec:RHECIAT_CH0002639 phosphoenolpyruvate--protein phosphotransferase protein (enzyme I of the phosphotransferase system); PEP-utilizing protein 2437513..2439117 Rhizobium leguminosarum bv. trifolii WSM1325 8015684 YP_002976248.1 CDS Rleg_2437 NC_012850.1 2439119 2439532 D KEGG: rec:RHECIAT_CH0002640 hypothetical protein; hypothetical protein 2439119..2439532 Rhizobium leguminosarum bv. trifolii WSM1325 8015685 YP_002976249.1 CDS Rleg_2438 NC_012850.1 2439584 2440576 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2439584..2440576 Rhizobium leguminosarum bv. trifolii WSM1325 8013418 YP_002976250.1 CDS Rleg_2439 NC_012850.1 2440593 2441321 R KEGG: rec:RHECIAT_CH0002642 hypothetical protein; hypothetical protein complement(2440593..2441321) Rhizobium leguminosarum bv. trifolii WSM1325 8013419 YP_002976251.1 CDS Rleg_2440 NC_012850.1 2441318 2442277 R PFAM: acetyl xylan esterase; KEGG: rec:RHECIAT_CH0002643 probable deacetylase protein; acetyl xylan esterase complement(2441318..2442277) Rhizobium leguminosarum bv. trifolii WSM1325 8013420 YP_002976252.1 CDS Rleg_2441 NC_012850.1 2442360 2442980 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pfl:PFL_3429 quinone family NAD(P)H dehydrogenase; NAD(P)H dehydrogenase (quinone) complement(2442360..2442980) Rhizobium leguminosarum bv. trifolii WSM1325 8013421 YP_002976253.1 CDS Rleg_2442 NC_012850.1 2443074 2443745 D PFAM: regulatory protein TetR; KEGG: pfo:Pfl01_3535 TetR family transcriptional regulator; TetR family transcriptional regulator 2443074..2443745 Rhizobium leguminosarum bv. trifolii WSM1325 8013422 YP_002976254.1 CDS Rleg_2443 NC_012850.1 2443788 2445299 D PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0002644 probable hydrolase protein; epoxide hydrolase domain-containing protein 2443788..2445299 Rhizobium leguminosarum bv. trifolii WSM1325 8013423 YP_002976255.1 CDS Rleg_2444 NC_012850.1 2445339 2446121 R KEGG: msl:Msil_2190 hypothetical protein; hypothetical protein complement(2445339..2446121) Rhizobium leguminosarum bv. trifolii WSM1325 8013424 YP_002976256.1 CDS Rleg_2445 NC_012850.1 2446493 2447185 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bja:blr1279 transcriptional regulatory protein; GntR family transcriptional regulator 2446493..2447185 Rhizobium leguminosarum bv. trifolii WSM1325 8013425 YP_002976257.1 CDS Rleg_2446 NC_012850.1 2447191 2447586 R KEGG: rec:RHECIAT_CH0002645 hypothetical protein; hypothetical protein complement(2447191..2447586) Rhizobium leguminosarum bv. trifolii WSM1325 8013426 YP_002976258.1 CDS Rleg_2447 NC_012850.1 2447707 2448318 R PFAM: O-methyltransferase family 3; KEGG: methyltransferase protein; O-methyltransferase family protein complement(2447707..2448318) Rhizobium leguminosarum bv. trifolii WSM1325 8013427 YP_002976259.1 CDS Rleg_2448 NC_012850.1 2448581 2449351 D PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: azc:AZC_3551 siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 2448581..2449351 Rhizobium leguminosarum bv. trifolii WSM1325 8013428 YP_002976260.1 CDS Rleg_2449 NC_012850.1 2449542 2450756 R PFAM: FAD dependent oxidoreductase; KEGG: rpi:Rpic_2467 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase complement(2449542..2450756) Rhizobium leguminosarum bv. trifolii WSM1325 8013429 YP_002976261.1 CDS Rleg_2450 NC_012850.1 2450758 2451987 R PFAM: peptidase C26; endoribonuclease L-PSP; glutamine amidotransferase class-I; KEGG: acr:Acry_1477 peptidase C26; peptidase C26 complement(2450758..2451987) Rhizobium leguminosarum bv. trifolii WSM1325 8015686 YP_002976262.1 CDS Rleg_2451 NC_012850.1 2452011 2452673 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1388 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transcriptional regulator inner membrane protein complement(2452011..2452673) Rhizobium leguminosarum bv. trifolii WSM1325 8015687 YP_002976263.1 CDS Rleg_2452 NC_012850.1 2452670 2453329 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1389 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transcriptional regulator inner membrane protein complement(2452670..2453329) Rhizobium leguminosarum bv. trifolii WSM1325 8013430 YP_002976264.1 CDS Rleg_2453 NC_012850.1 2453337 2454089 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: pol:Bpro_1390 ABC transporter; ABC transporter complement(2453337..2454089) Rhizobium leguminosarum bv. trifolii WSM1325 8013431 YP_002976265.1 CDS Rleg_2454 NC_012850.1 2454273 2455151 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pol:Bpro_1391 extracellular solute-binding protein, family 3; family 3 extracellular solute-binding protein complement(2454273..2455151) Rhizobium leguminosarum bv. trifolii WSM1325 8013432 YP_002976266.1 CDS Rleg_2455 NC_012850.1 2455314 2456369 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpy:Bphyt_4230 transcriptional regulator, AraC family; AraC family transcriptional regulator 2455314..2456369 Rhizobium leguminosarum bv. trifolii WSM1325 8013433 YP_002976267.1 CDS Rleg_2456 NC_012850.1 2456488 2456994 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0002648 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator 2456488..2456994 Rhizobium leguminosarum bv. trifolii WSM1325 8015688 YP_002976268.1 CDS Rleg_2457 NC_012850.1 2457027 2458328 R PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: smd:Smed_5519 epoxide hydrolase domain protein; epoxide hydrolase domain-containing protein complement(2457027..2458328) Rhizobium leguminosarum bv. trifolii WSM1325 8013434 YP_002976269.1 CDS Rleg_2458 NC_012850.1 2458560 2458976 D PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0002649 NTP pyrophosphohydrolase protein, MutT/NUDIX family; NUDIX hydrolase 2458560..2458976 Rhizobium leguminosarum bv. trifolii WSM1325 8013435 YP_002976270.1 CDS Rleg_2459 NC_012850.1 2459018 2460079 R KEGG: rec:RHECIAT_CH0002650 adenylate cyclase protein; adenylate cyclase protein complement(2459018..2460079) Rhizobium leguminosarum bv. trifolii WSM1325 8013436 YP_002976271.1 CDS Rleg_2460 NC_012850.1 2460197 2460592 R PFAM: OsmC family protein; KEGG: ret:RHE_CH02544 organic hydroperoxide resistance protein; OsmC family protein complement(2460197..2460592) Rhizobium leguminosarum bv. trifolii WSM1325 8013437 YP_002976272.1 CDS Rleg_2461 NC_012850.1 2460855 2461652 D PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: methyltransferase protein; type 11 methyltransferase 2460855..2461652 Rhizobium leguminosarum bv. trifolii WSM1325 8013438 YP_002976273.1 CDS Rleg_2462 NC_012850.1 2461670 2462017 R KEGG: rec:RHECIAT_CH0002653 hypothetical protein; hypothetical protein complement(2461670..2462017) Rhizobium leguminosarum bv. trifolii WSM1325 8013439 YP_002976274.1 CDS Rleg_2463 NC_012850.1 2462155 2463471 R PFAM: Extensin family protein; KEGG: rec:RHECIAT_CH0002654 hypothetical protein; extensin family protein complement(2462155..2463471) Rhizobium leguminosarum bv. trifolii WSM1325 8013440 YP_002976275.1 CDS Rleg_2464 NC_012850.1 2463622 2465439 R PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0002655 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(2463622..2465439) Rhizobium leguminosarum bv. trifolii WSM1325 8013441 YP_002976276.1 CDS Rleg_2465 NC_012850.1 2465730 2466116 D PFAM: thioesterase superfamily protein; KEGG: ret:RHE_CH02548 acyl-CoA hydrolase protein; thioesterase superfamily protein 2465730..2466116 Rhizobium leguminosarum bv. trifolii WSM1325 8013442 YP_002976277.1 CDS Rleg_2466 NC_012850.1 2466136 2466723 D KEGG: ret:RHE_CH02549 hypothetical protein; hypothetical protein 2466136..2466723 Rhizobium leguminosarum bv. trifolii WSM1325 8013443 YP_002976278.1 CDS Rleg_2467 NC_012850.1 2466979 2467695 R KEGG: hypothetical protein; hypothetical protein complement(2466979..2467695) Rhizobium leguminosarum bv. trifolii WSM1325 8013444 YP_002976279.1 CDS Rleg_2468 NC_012850.1 2467729 2468211 R KEGG: hypothetical protein; hypothetical protein complement(2467729..2468211) Rhizobium leguminosarum bv. trifolii WSM1325 8013445 YP_002976280.1 CDS Rleg_2469 NC_012850.1 2468283 2468699 R PFAM: carboxymuconolactone decarboxylase; KEGG: ypm:YP_1846 decarboxylase; carboxymuconolactone decarboxylase complement(2468283..2468699) Rhizobium leguminosarum bv. trifolii WSM1325 8013446 YP_002976281.1 CDS Rleg_2470 NC_012850.1 2468725 2469813 R KEGG: exported protein; hypothetical protein complement(2468725..2469813) Rhizobium leguminosarum bv. trifolii WSM1325 8013447 YP_002976282.1 CDS Rleg_2471 NC_012850.1 2469955 2470854 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator complement(2469955..2470854) Rhizobium leguminosarum bv. trifolii WSM1325 8013448 YP_002976283.1 CDS Rleg_2472 NC_012850.1 2471010 2471999 D PFAM: aldo/keto reductase; KEGG: oxidoreductase protein; aldo/keto reductase 2471010..2471999 Rhizobium leguminosarum bv. trifolii WSM1325 8013449 YP_002976284.1 CDS Rleg_2473 NC_012850.1 2472101 2473285 R PFAM: protein of unknown function DUF1501; KEGG: rec:RHECIAT_CH0002658 hypothetical protein; hypothetical protein complement(2472101..2473285) Rhizobium leguminosarum bv. trifolii WSM1325 8013450 YP_002976285.1 CDS Rleg_2474 NC_012850.1 2473400 2474911 R PFAM: hypothetical protein; KEGG: ret:RHE_CH02551 hypothetical protein; hypothetical protein complement(2473400..2474911) Rhizobium leguminosarum bv. trifolii WSM1325 8015689 YP_002976286.1 CDS Rleg_2475 NC_012850.1 2475123 2475470 R PFAM: protein of unknown function DUF486; KEGG: rec:RHECIAT_CH0002660 hypothetical protein; hypothetical protein complement(2475123..2475470) Rhizobium leguminosarum bv. trifolii WSM1325 8015690 YP_002976287.1 CDS Rleg_2476 NC_012850.1 2475784 2476611 D PFAM: RDD domain containing protein; RDD domain-containing protein 2475784..2476611 Rhizobium leguminosarum bv. trifolii WSM1325 8013451 YP_002976288.1 CDS Rleg_2477 NC_012850.1 2476691 2477941 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: transporter ; K08178 MFS transporter, SHS family, lactate transporter; major facilitator superfamily protein complement(2476691..2477941) Rhizobium leguminosarum bv. trifolii WSM1325 8013452 YP_002976289.1 CDS Rleg_2478 NC_012850.1 2478380 2479189 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rec:RHECIAT_CH0002661 probable SAM-dependent methyltransferase protein; type 11 methyltransferase complement(2478380..2479189) Rhizobium leguminosarum bv. trifolii WSM1325 8013453 YP_002976290.1 CDS Rleg_2479 NC_012850.1 2479272 2480183 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: xac:XAC0581 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2479272..2480183) Rhizobium leguminosarum bv. trifolii WSM1325 8013454 YP_002976291.1 CDS Rleg_2480 NC_012850.1 2480277 2481014 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bja:blr4790 oxidoreductase; short-chain dehydrogenase/reductase SDR 2480277..2481014 Rhizobium leguminosarum bv. trifolii WSM1325 8013455 YP_002976292.1 CDS Rleg_2481 NC_012850.1 2481314 2482186 R PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_CH0002662 hypothetical conserved membrane protein; NmrA family protein complement(2481314..2482186) Rhizobium leguminosarum bv. trifolii WSM1325 8013456 YP_002976293.1 CDS Rleg_2482 NC_012850.1 2482287 2483210 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002663 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 2482287..2483210 Rhizobium leguminosarum bv. trifolii WSM1325 8013457 YP_002976294.1 CDS Rleg_2483 NC_012850.1 2483348 2484814 R PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: sulfate permease; sulfate transporter complement(2483348..2484814) Rhizobium leguminosarum bv. trifolii WSM1325 8013458 YP_002976295.1 CDS Rleg_2484 NC_012850.1 2485085 2485336 R KEGG: rec:RHECIAT_CH0002664 hypothetical protein; hypothetical protein complement(2485085..2485336) Rhizobium leguminosarum bv. trifolii WSM1325 8013459 YP_002976296.1 CDS Rleg_2485 NC_012850.1 2485413 2485790 R LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; response regulator complement(2485413..2485790) Rhizobium leguminosarum bv. trifolii WSM1325 8013460 YP_002976297.1 CDS Rleg_2486 NC_012850.1 2486071 2487828 R KEGG: pau:PA14_46540 hypothetical protein; hypothetical protein complement(2486071..2487828) Rhizobium leguminosarum bv. trifolii WSM1325 8013461 YP_002976298.1 CDS Rleg_2487 NC_012850.1 2488100 2488888 R PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rec:RHECIAT_CH0002667 hypothetical protein; hypothetical protein complement(2488100..2488888) Rhizobium leguminosarum bv. trifolii WSM1325 8013462 YP_002976299.1 CDS Rleg_2488 NC_012850.1 2489156 2489746 D PFAM: Ankyrin; SMART: Ankyrin; KEGG: ankyrin repeat protein; ankyrin 2489156..2489746 Rhizobium leguminosarum bv. trifolii WSM1325 8013463 YP_002976300.1 CDS Rleg_2489 NC_012850.1 2489792 2490316 D KEGG: hypothetical protein; hypothetical protein 2489792..2490316 Rhizobium leguminosarum bv. trifolii WSM1325 8013464 YP_002976301.1 CDS Rleg_2490 NC_012850.1 2490336 2492552 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: tetratricopeptide domain protein; KEGG: adenylate cyclase protein; SNP /replace=T; adenylate/guanylate cyclase complement(2490336..2492552) Rhizobium leguminosarum bv. trifolii WSM1325 8013465 YP_002976302.1 CDS Rleg_2492 NC_012850.1 2492773 2494512 R PFAM: Rhomboid family protein; KEGG: rec:RHECIAT_CH0002672 hypothetical protein; rhomboid family protein complement(2492773..2494512) Rhizobium leguminosarum bv. trifolii WSM1325 8013467 YP_002976303.1 CDS Rleg_2493 NC_012850.1 2494757 2495524 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rec:RHECIAT_CH0002668 probable adenylate cyclase protein; adenylate/guanylate cyclase 2494757..2495524 Rhizobium leguminosarum bv. trifolii WSM1325 8013468 YP_002976304.1 CDS Rleg_2494 NC_012850.1 2495784 2496173 R KEGG: rec:RHECIAT_CH0002671 hypothetical protein; hypothetical protein complement(2495784..2496173) Rhizobium leguminosarum bv. trifolii WSM1325 8015691 YP_002976305.1 CDS Rleg_2495 NC_012850.1 2496324 2496716 R PFAM: protein of unknown function DUF982; KEGG: ret:RHE_CH03835 hypothetical protein; hypothetical protein complement(2496324..2496716) Rhizobium leguminosarum bv. trifolii WSM1325 8015692 YP_002976306.1 CDS Rleg_2496 NC_012850.1 2496658 2497395 R hypothetical protein complement(2496658..2497395) Rhizobium leguminosarum bv. trifolii WSM1325 8013469 YP_002976307.1 CDS Rleg_2497 NC_012850.1 2497512 2499302 D PFAM: glycoside hydrolase 15-related; KEGG: pst:PSPTO_3119 glycosy hydrolase family protein; glycoside hydrolase 15-related 2497512..2499302 Rhizobium leguminosarum bv. trifolii WSM1325 8013470 YP_002976308.1 CDS Rleg_2498 NC_012850.1 2499632 2502625 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2499632..2502625 Rhizobium leguminosarum bv. trifolii WSM1325 8013471 YP_002976309.1 CDS Rleg_2499 NC_012850.1 2502769 2503215 D PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02565 acetyltransferase protein; N-acetyltransferase GCN5 2502769..2503215 Rhizobium leguminosarum bv. trifolii WSM1325 8013472 YP_002976310.1 CDS Rleg_2500 NC_012850.1 2503597 2506395 D PFAM: Hemolysin-type calcium-binding region; Cadherin; SMART: Cadherin; KEGG: rec:RHECIAT_PC0000856 hemolysin-type calcium-binding protein; hemolysin-type calcium-binding protein 2503597..2506395 Rhizobium leguminosarum bv. trifolii WSM1325 8015693 YP_002976311.1 CDS Rleg_2501 NC_012850.1 2506623 2509451 D PFAM: Cadherin; Hemolysin-type calcium-binding region; SMART: Cadherin; KEGG: rec:RHECIAT_PC0000856 hemolysin-type calcium-binding protein; cadherin 2506623..2509451 Rhizobium leguminosarum bv. trifolii WSM1325 8013473 YP_002976312.1 CDS Rleg_2502 NC_012850.1 2509680 2510147 D KEGG: rec:RHECIAT_CH0002678 hypothetical protein; hypothetical protein 2509680..2510147 Rhizobium leguminosarum bv. trifolii WSM1325 8013474 YP_002976313.1 CDS Rleg_2503 NC_012850.1 2510691 2510903 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rec:RHECIAT_CH0002680 cold shock protein; cold-shock protein 2510691..2510903 Rhizobium leguminosarum bv. trifolii WSM1325 8013475 YP_002976314.1 CDS Rleg_2504 NC_012850.1 2511083 2512084 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: rec:RHECIAT_CH0002682 tRNA-dihydrouridine synthase protein; tRNA-dihydrouridine synthase A 2511083..2512084 Rhizobium leguminosarum bv. trifolii WSM1325 8013476 YP_002976315.1 CDS Rleg_2505 NC_012850.1 2512123 2513079 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: ret:RHE_CH02570 serine protease HtrA/DegQ family protein; peptidase S1 and S6 chymotrypsin/Hap complement(2512123..2513079) Rhizobium leguminosarum bv. trifolii WSM1325 8013477 YP_002976316.1 CDS Rleg_2506 NC_012850.1 2513673 2514509 D PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH02571 chloride peroxidase protein; alpha/beta hydrolase 2513673..2514509 Rhizobium leguminosarum bv. trifolii WSM1325 8013478 YP_002976317.1 CDS Rleg_2507 NC_012850.1 2514553 2514834 D KEGG: rec:RHECIAT_CH0002685 hypothetical protein; hypothetical protein 2514553..2514834 Rhizobium leguminosarum bv. trifolii WSM1325 8013479 YP_002976318.1 CDS Rleg_2508 NC_012850.1 2515031 2515240 D KEGG: rec:RHECIAT_CH0002686 hypothetical protein; hypothetical protein 2515031..2515240 Rhizobium leguminosarum bv. trifolii WSM1325 8013480 YP_002976319.1 CDS Rleg_2509 NC_012850.1 2515400 2516458 R PFAM: Haemolysin-type calcium binding domain protein; Hemolysin-type calcium-binding region; KEGG: mlo:mll1028 rhizobiocin RzcA; Hemolysin-type calcium binding domain-containing protein complement(2515400..2516458) Rhizobium leguminosarum bv. trifolii WSM1325 8013481 YP_002976320.1 CDS Rleg_2510 NC_012850.1 2516907 2517389 D PFAM: BA14K family protein; KEGG: rec:RHECIAT_CH0002688 hypothetical protein; BA14K family protein 2516907..2517389 Rhizobium leguminosarum bv. trifolii WSM1325 8013482 YP_002976321.1 CDS Rleg_2511 NC_012850.1 2517419 2517556 D hypothetical protein 2517419..2517556 Rhizobium leguminosarum bv. trifolii WSM1325 8013483 YP_002976322.1 CDS Rleg_2512 NC_012850.1 2517656 2518177 D PFAM: BA14K family protein; KEGG: ret:RHE_CH02573 hypothetical protein; BA14K family protein 2517656..2518177 Rhizobium leguminosarum bv. trifolii WSM1325 8013484 YP_002976323.1 CDS Rleg_2513 NC_012850.1 2518433 2519023 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0002689 hypothetical protein; N-acetyltransferase GCN5 2518433..2519023 Rhizobium leguminosarum bv. trifolii WSM1325 8013485 YP_002976324.1 CDS Rleg_2514 NC_012850.1 2519155 2520024 R KEGG: rec:RHECIAT_CH0002690 hypothetical protein; hypothetical protein complement(2519155..2520024) Rhizobium leguminosarum bv. trifolii WSM1325 8013486 YP_002976325.1 CDS Rleg_2515 NC_012850.1 2520266 2521618 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH02576 two-component sensor histidine kinase protein; histidine kinase complement(2520266..2521618) Rhizobium leguminosarum bv. trifolii WSM1325 8013487 YP_002976326.1 CDS Rleg_2516 NC_012850.1 2521618 2522289 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ret:RHE_CH02577 two-component response regulator protein; transcriptional regulator complement(2521618..2522289) Rhizobium leguminosarum bv. trifolii WSM1325 8013488 YP_002976327.1 CDS Rleg_2517 NC_012850.1 2522430 2522576 D hypothetical protein 2522430..2522576 Rhizobium leguminosarum bv. trifolii WSM1325 8013489 YP_002976328.1 CDS Rleg_2518 NC_012850.1 2522593 2523135 R PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_CH02065 oxidoreductase protein; NADPH-dependent FMN reductase complement(2522593..2523135) Rhizobium leguminosarum bv. trifolii WSM1325 8015694 YP_002976329.1 CDS Rleg_2519 NC_012850.1 2523299 2524300 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH01150 ABC transporter, ATP-binding protein; ABC transporter 2523299..2524300 Rhizobium leguminosarum bv. trifolii WSM1325 8015695 YP_002976330.1 CDS Rleg_2520 NC_012850.1 2524297 2525097 D PFAM: protein of unknown function DUF990; KEGG: ret:RHE_CH01149 transporter, permease protein; hypothetical protein 2524297..2525097 Rhizobium leguminosarum bv. trifolii WSM1325 8013490 YP_002976331.1 CDS Rleg_2521 NC_012850.1 2525100 2525903 D PFAM: protein of unknown function DUF990; KEGG: ret:RHE_CH01148 transporter, permease protein; hypothetical protein 2525100..2525903 Rhizobium leguminosarum bv. trifolii WSM1325 8013491 YP_002976332.1 CDS Rleg_2522 NC_012850.1 2525929 2526450 R PFAM: helix-turn-helix HxlR type; KEGG: ret:RHE_CH02578 hypothetical protein; HxlR family transcriptional regulator complement(2525929..2526450) Rhizobium leguminosarum bv. trifolii WSM1325 8013492 YP_002976333.1 CDS Rleg_2523 NC_012850.1 2526543 2527184 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_CH0002695 probable dihydrofolate reductase protein; bifunctional deaminase-reductase domain-containing protein 2526543..2527184 Rhizobium leguminosarum bv. trifolii WSM1325 8013493 YP_002976334.1 CDS Rleg_2524 NC_012850.1 2527373 2527576 D KEGG: rec:RHECIAT_CH0002698 hypothetical protein; hypothetical protein 2527373..2527576 Rhizobium leguminosarum bv. trifolii WSM1325 8013494 YP_002976335.1 CDS Rleg_2525 NC_012850.1 2527721 2528365 R PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0002699 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(2527721..2528365) Rhizobium leguminosarum bv. trifolii WSM1325 8013495 YP_002976336.1 CDS Rleg_2526 NC_012850.1 2528454 2529107 D PFAM: O-methyltransferase family 3; KEGG: rec:RHECIAT_CH0002700 methyltransferase protein; O-methyltransferase family protein 2528454..2529107 Rhizobium leguminosarum bv. trifolii WSM1325 8013496 YP_002976337.1 CDS Rleg_2527 NC_012850.1 2529175 2529798 R PFAM: regulatory protein TetR; KEGG: rpb:RPB_4514 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2529175..2529798) Rhizobium leguminosarum bv. trifolii WSM1325 8013497 YP_002976338.1 CDS Rleg_2528 NC_012850.1 2529934 2530965 D PFAM: aldo/keto reductase; KEGG: mms:mma_0249 hypothetical protein; aldo/keto reductase 2529934..2530965 Rhizobium leguminosarum bv. trifolii WSM1325 8013498 YP_002976339.1 CDS Rleg_2529 NC_012850.1 2531106 2531981 R PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: bbt:BBta_2718 transcriptional regulator; MarR family transcriptional regulator complement(2531106..2531981) Rhizobium leguminosarum bv. trifolii WSM1325 8013499 YP_002976340.1 CDS Rleg_2530 NC_012850.1 2532098 2532940 D KEGG: rec:RHECIAT_CH0002701 hypothetical protein; hypothetical protein 2532098..2532940 Rhizobium leguminosarum bv. trifolii WSM1325 8013500 YP_002976341.1 CDS Rleg_2531 NC_012850.1 2533093 2533980 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mlr1973 glycine cleavage system transcription activator; LysR family transcriptional regulator complement(2533093..2533980) Rhizobium leguminosarum bv. trifolii WSM1325 8013501 YP_002976342.1 CDS Rleg_2532 NC_012850.1 2534159 2534638 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: nha:Nham_3519 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 2534159..2534638 Rhizobium leguminosarum bv. trifolii WSM1325 8013502 YP_002976343.1 CDS Rleg_2533 NC_012850.1 2534682 2535413 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: acp:A2cp1_3326 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2534682..2535413 Rhizobium leguminosarum bv. trifolii WSM1325 8013503 YP_002976344.1 CDS Rleg_2534 NC_012850.1 2535487 2535921 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mxa:MXAN_6486 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2535487..2535921) Rhizobium leguminosarum bv. trifolii WSM1325 8013504 YP_002976345.1 CDS Rleg_2535 NC_012850.1 2536044 2536412 D KEGG: ade:Adeh_3528 hypothetical protein; hypothetical protein 2536044..2536412 Rhizobium leguminosarum bv. trifolii WSM1325 8013505 YP_002976346.1 CDS Rleg_2536 NC_012850.1 2536430 2536897 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_CH0002707 probable transcriptional regulator protein, AsnC family; AsnC family transcriptional regulator complement(2536430..2536897) Rhizobium leguminosarum bv. trifolii WSM1325 8013506 YP_002976347.1 CDS Rleg_2537 NC_012850.1 2537022 2538233 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2537022..2538233 Rhizobium leguminosarum bv. trifolii WSM1325 8013507 YP_002976348.1 CDS Rleg_2538 NC_012850.1 2538582 2538755 D hypothetical protein 2538582..2538755 Rhizobium leguminosarum bv. trifolii WSM1325 8013508 YP_002976349.1 CDS Rleg_2539 NC_012850.1 2538853 2539443 R PFAM: regulatory protein TetR; KEGG: bra:BRADO2966 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2538853..2539443) Rhizobium leguminosarum bv. trifolii WSM1325 8013509 YP_002976350.1 CDS Rleg_2540 NC_012850.1 2539786 2540616 D TIGRFAM: methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: bra:BRADO2967 hypothetical protein; methyltransferase 2539786..2540616 Rhizobium leguminosarum bv. trifolii WSM1325 8013510 YP_002976351.1 CDS Rleg_2541 NC_012850.1 2540597 2541040 R KEGG: sil:SPO0922 hypothetical protein; hypothetical protein complement(2540597..2541040) Rhizobium leguminosarum bv. trifolii WSM1325 8015696 YP_002976352.1 CDS Rleg_2542 NC_012850.1 2541293 2542069 D KEGG: rec:RHECIAT_CH0002709 hypothetical protein; hypothetical protein 2541293..2542069 Rhizobium leguminosarum bv. trifolii WSM1325 8015697 YP_002976353.1 CDS Rleg_2543 NC_012850.1 2542160 2542360 D hypothetical protein 2542160..2542360 Rhizobium leguminosarum bv. trifolii WSM1325 8013511 YP_002976354.1 CDS Rleg_2545 NC_012850.1 2543035 2544915 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sucrose ABC transporter; ABC transporter complement(2543035..2544915) Rhizobium leguminosarum bv. trifolii WSM1325 8013513 YP_002976355.1 CDS Rleg_2546 NC_012850.1 2545079 2545648 R KEGG: pol:Bpro_1646 hypothetical protein; hypothetical protein complement(2545079..2545648) Rhizobium leguminosarum bv. trifolii WSM1325 8013514 YP_002976356.1 CDS Rleg_2547 NC_012850.1 2545734 2546738 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sme:SMc00283 transcription regulator protein; LysR family transcriptional regulator 2545734..2546738 Rhizobium leguminosarum bv. trifolii WSM1325 8013515 YP_002976357.1 CDS Rleg_2548 NC_012850.1 2546845 2547246 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rec:RHECIAT_CH0002712 hypothetical protein; glutathione-dependent formaldehyde-activating protein 2546845..2547246 Rhizobium leguminosarum bv. trifolii WSM1325 8013516 YP_002976358.1 CDS Rleg_2549 NC_012850.1 2547325 2547798 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rec:RHECIAT_CH0002713 3-demethylubiquinone-9 3-O-methyltransferase protein; 3-demethylubiquinone-9 3-methyltransferase complement(2547325..2547798) Rhizobium leguminosarum bv. trifolii WSM1325 8013517 YP_002976359.1 CDS Rleg_2551 NC_012850.1 2548682 2549326 D PFAM: phosphoglycerate mutase; KEGG: rec:RHECIAT_PC0000521 phosphoglycerate mutase protein; phosphoglycerate mutase 2548682..2549326 Rhizobium leguminosarum bv. trifolii WSM1325 8013519 YP_002976360.1 CDS Rleg_2552 NC_012850.1 2549516 2550520 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2549516..2550520) Rhizobium leguminosarum bv. trifolii WSM1325 8013520 YP_002976361.1 CDS Rleg_2553 NC_012850.1 2550744 2551133 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2550744..2551133) Rhizobium leguminosarum bv. trifolii WSM1325 8015698 YP_002976362.1 CDS Rleg_2554 NC_012850.1 2551327 2551542 D KEGG: rec:RHECIAT_CH0002715 hypothetical protein; hypothetical protein 2551327..2551542 Rhizobium leguminosarum bv. trifolii WSM1325 8015699 YP_002976363.1 CDS Rleg_2555 NC_012850.1 2551674 2552444 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2551674..2552444 Rhizobium leguminosarum bv. trifolii WSM1325 8013521 YP_002976364.1 CDS Rleg_2556 NC_012850.1 2552460 2553380 R PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: rec:RHECIAT_CH0002718 probable ornithine cyclodeaminase protein; ornithine cyclodeaminase/mu-crystallin complement(2552460..2553380) Rhizobium leguminosarum bv. trifolii WSM1325 8013522 YP_002976365.1 CDS Rleg_2557 NC_012850.1 2553480 2553986 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02595 acetyltransferase protein; N-acetyltransferase GCN5 complement(2553480..2553986) Rhizobium leguminosarum bv. trifolii WSM1325 8013523 YP_002976366.1 CDS Rleg_2558 NC_012850.1 2554910 2556313 D PFAM: pyridoxal-dependent decarboxylase; KEGG: ret:RHE_CH02599 pyridoxal-dependent amino acid decarboxylase protein; pyridoxal-dependent decarboxylase 2554910..2556313 Rhizobium leguminosarum bv. trifolii WSM1325 8013524 YP_002976367.1 CDS Rleg_2559 NC_012850.1 2556456 2556776 D KEGG: smt:Smal_3946 phosphatase; phosphatase 2556456..2556776 Rhizobium leguminosarum bv. trifolii WSM1325 8013525 YP_002976368.1 CDS Rleg_2560 NC_012850.1 2556869 2557345 R PFAM: GCN5-related N-acetyltransferase; KEGG: afe:Lferr_1671 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2556869..2557345) Rhizobium leguminosarum bv. trifolii WSM1325 8013526 YP_002976369.1 CDS Rleg_2561 NC_012850.1 2557499 2558284 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rpt:Rpal_1805 methyltransferase type 11; type 11 methyltransferase 2557499..2558284 Rhizobium leguminosarum bv. trifolii WSM1325 8013527 YP_002976370.1 CDS Rleg_2562 NC_012850.1 2558353 2558775 R KEGG: ret:RHE_CH02601 hypothetical protein; hypothetical protein complement(2558353..2558775) Rhizobium leguminosarum bv. trifolii WSM1325 8013528 YP_002976371.1 CDS Rleg_2563 NC_012850.1 2559277 2560569 R PFAM: major facilitator superfamily MFS_1; KEGG: lch:Lcho_4332 major facilitator transporter; major facilitator superfamily protein complement(2559277..2560569) Rhizobium leguminosarum bv. trifolii WSM1325 8013529 YP_002976372.1 CDS Rleg_2565 NC_012850.1 2562349 2564250 D PFAM: K potassium transporter; KEGG: rec:RHECIAT_CH0002728 potassium transporter protein; K potassium transporter 2562349..2564250 Rhizobium leguminosarum bv. trifolii WSM1325 8013531 YP_002976373.1 CDS Rleg_2566 NC_012850.1 2564336 2565916 R TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: ret:RHE_CH02602 Na+/H+ antiporter protein; Na+/H+ antiporter complement(2564336..2565916) Rhizobium leguminosarum bv. trifolii WSM1325 8013532 YP_002976374.1 CDS Rleg_2567 NC_012850.1 2566260 2567036 D PFAM: intradiol ring-cleavage dioxygenase; KEGG: rec:RHECIAT_CH0002729 protocatechuate 3,4-dioxygenase protein, beta chain; intradiol ring-cleavage dioxygenase 2566260..2567036 Rhizobium leguminosarum bv. trifolii WSM1325 8013533 YP_002976375.1 CDS Rleg_2568 NC_012850.1 2567137 2567913 R PFAM: oxidoreductase molybdopterin binding; KEGG: rec:RHECIAT_PC0000046 molybdopterin-binding oxidoreductase protein; oxidoreductase molybdopterin binding complement(2567137..2567913) Rhizobium leguminosarum bv. trifolii WSM1325 8013534 YP_002976376.1 CDS Rleg_2569 NC_012850.1 2567910 2568752 R PFAM: cytochrome B561; KEGG: rec:RHECIAT_PC0000045 transmembrane cytochrome b-type protein; cytochrome B561 complement(2567910..2568752) Rhizobium leguminosarum bv. trifolii WSM1325 8013535 YP_002976377.1 CDS Rleg_2570 NC_012850.1 2568840 2569124 R TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: rec:RHECIAT_PC0000044 hypothetical protein; pentapeptide MXKDX repeat-containing protein complement(2568840..2569124) Rhizobium leguminosarum bv. trifolii WSM1325 8013536 YP_002976378.1 CDS Rleg_2571 NC_012850.1 2569360 2569908 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rec:RHECIAT_PC0000043 RNA polymerase sigma factor protein, ECF family; ECF subfamily RNA polymerase sigma-24 subunit 2569360..2569908 Rhizobium leguminosarum bv. trifolii WSM1325 8013537 YP_002976379.1 CDS Rleg_2572 NC_012850.1 2569905 2570549 D PFAM: protein of unknown function DUF1109; KEGG: rec:RHECIAT_PC0000042 hypothetical protein; hypothetical protein 2569905..2570549 Rhizobium leguminosarum bv. trifolii WSM1325 8013538 YP_002976380.1 CDS Rleg_2573 NC_012850.1 2570687 2570968 D KEGG: rec:RHECIAT_CH0002730 nodulation protein; nodulation protein 2570687..2570968 Rhizobium leguminosarum bv. trifolii WSM1325 8013539 YP_002976381.1 CDS Rleg_2574 NC_012850.1 2571034 2572527 R SMART: carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; KEGG: rec:RHECIAT_CH0002731 polysaccharidase protein; carbohydrate-binding and sugar hydrolysis protein complement(2571034..2572527) Rhizobium leguminosarum bv. trifolii WSM1325 8013540 YP_002976382.1 CDS Rleg_2575 NC_012850.1 2572985 2574472 R SMART: Parallel beta-helix repeat; KEGG: ret:RHE_CH02606 polysaccharidase protein; hypothetical protein complement(2572985..2574472) Rhizobium leguminosarum bv. trifolii WSM1325 8013541 YP_002976383.1 CDS Rleg_2576 NC_012850.1 2574999 2575964 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mll8218 hypothetical protein; hypothetical protein complement(2574999..2575964) Rhizobium leguminosarum bv. trifolii WSM1325 8013542 YP_002976384.1 CDS Rleg_2577 NC_012850.1 2576299 2577195 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: transcriptional regulator protein; AraC family transcriptional regulator 2576299..2577195 Rhizobium leguminosarum bv. trifolii WSM1325 8013543 YP_002976385.1 CDS Rleg_2578 NC_012850.1 2577265 2577693 D PFAM: Limonene-12-epoxide hydrolase; protein of unknown function DUF1486; KEGG: eca:ECA1588 hypothetical protein; limonene-12-epoxide hydrolase 2577265..2577693 Rhizobium leguminosarum bv. trifolii WSM1325 8013544 YP_002976386.1 CDS Rleg_2579 NC_012850.1 2577767 2578645 D PFAM: NmrA family protein; TrkA-N domain protein; KEGG: hypothetical protein; NmrA family protein 2577767..2578645 Rhizobium leguminosarum bv. trifolii WSM1325 8015700 YP_002976387.1 CDS Rleg_2580 NC_012850.1 2578743 2579945 R PFAM: protein of unknown function DUF214; KEGG: ret:RHE_CH02607 hypothetical protein; hypothetical protein complement(2578743..2579945) Rhizobium leguminosarum bv. trifolii WSM1325 8013545 YP_002976388.1 CDS Rleg_2581 NC_012850.1 2579950 2581089 R PFAM: protein of unknown function DUF214; KEGG: rec:RHECIAT_CH0002737 membrane transporter protein; hypothetical protein complement(2579950..2581089) Rhizobium leguminosarum bv. trifolii WSM1325 8015701 YP_002976389.1 CDS Rleg_2582 NC_012850.1 2581086 2581790 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002738 ABC transporter, ATP-binding protein; ABC transporter complement(2581086..2581790) Rhizobium leguminosarum bv. trifolii WSM1325 8015702 YP_002976390.1 CDS Rleg_2583 NC_012850.1 2581787 2583100 R PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH02610 hypothetical protein; secretion protein HlyD family protein complement(2581787..2583100) Rhizobium leguminosarum bv. trifolii WSM1325 8013546 YP_002976391.1 CDS Rleg_2584 NC_012850.1 2583379 2584452 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0002740 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator complement(2583379..2584452) Rhizobium leguminosarum bv. trifolii WSM1325 8013547 YP_002976392.1 CDS Rleg_2585 NC_012850.1 2584702 2585682 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH02699 mRNA-binding protein; NAD-dependent epimerase/dehydratase complement(2584702..2585682) Rhizobium leguminosarum bv. trifolii WSM1325 8013548 YP_002976393.1 CDS Rleg_2586 NC_012850.1 2585949 2586125 D hypothetical protein 2585949..2586125 Rhizobium leguminosarum bv. trifolii WSM1325 8013549 YP_002976394.1 CDS Rleg_2587 NC_012850.1 2586134 2586508 D KEGG: cvi:CV_1450 hypothetical protein; hypothetical protein 2586134..2586508 Rhizobium leguminosarum bv. trifolii WSM1325 8013550 YP_002976395.1 CDS Rleg_2588 NC_012850.1 2586603 2587184 R KEGG: hypothetical protein; hypothetical protein complement(2586603..2587184) Rhizobium leguminosarum bv. trifolii WSM1325 8013551 YP_002976396.1 CDS Rleg_2589 NC_012850.1 2587388 2588908 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: oxygenase (tetracycline 6-hydroxylase) protein; monooxygenase FAD-binding complement(2587388..2588908) Rhizobium leguminosarum bv. trifolii WSM1325 8013552 YP_002976397.1 CDS Rleg_2590 NC_012850.1 2589312 2589677 R KEGG: rec:RHECIAT_CH0002742 hypothetical conserved membrane protein; hypothetical protein complement(2589312..2589677) Rhizobium leguminosarum bv. trifolii WSM1325 8013553 YP_002976398.1 CDS Rleg_2591 NC_012850.1 2589685 2590404 R PFAM: cytochrome C oxidase subunit III; KEGG: rec:RHECIAT_CH0002743 cytochrome C oxidase protein, subunit III; cytochrome C oxidase subunit III complement(2589685..2590404) Rhizobium leguminosarum bv. trifolii WSM1325 8013554 YP_002976399.1 CDS Rleg_2592 NC_012850.1 2590416 2591129 R PFAM: cytochrome C oxidase subunit III; KEGG: rec:RHECIAT_CH0002744 cytochrome C oxidase protein, subunit III; cytochrome C oxidase subunit III complement(2590416..2591129) Rhizobium leguminosarum bv. trifolii WSM1325 8013555 YP_002976400.1 CDS Rleg_2593 NC_012850.1 2591126 2592904 R KEGG: rec:RHECIAT_CH0002745 cytochrome C oxidase protein, subunit I; TIGRFAM: cytochrome C oxidase, subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome C oxidase, subunit I complement(2591126..2592904) Rhizobium leguminosarum bv. trifolii WSM1325 8015703 YP_002976401.1 CDS Rleg_2594 NC_012850.1 2592959 2593777 R PFAM: cytochrome C oxidase subunit II; KEGG: rec:RHECIAT_CH0002746 cytochrome C oxidase protein, subunit II; cytochrome C oxidase subunit II complement(2592959..2593777) Rhizobium leguminosarum bv. trifolii WSM1325 8015704 YP_002976402.1 CDS Rleg_2595 NC_012850.1 2593925 2594314 R PFAM: cytochrome C class I; KEGG: rec:RHECIAT_CH0002747 probable cytochrome C protein; cytochrome C class I complement(2593925..2594314) Rhizobium leguminosarum bv. trifolii WSM1325 8013556 YP_002976403.1 CDS Rleg_2596 NC_012850.1 2594537 2595460 R PFAM: metal-dependent protein hydrolase; KEGG: rec:RHECIAT_CH0002748 hydrolase protein; metal-dependent protein hydrolase complement(2594537..2595460) Rhizobium leguminosarum bv. trifolii WSM1325 8013557 YP_002976404.1 CDS Rleg_2597 NC_012850.1 2595687 2596178 D KEGG: ret:RHE_CH00957 hypothetical protein; hypothetical protein 2595687..2596178 Rhizobium leguminosarum bv. trifolii WSM1325 8013558 YP_002976405.1 CDS Rleg_2599 NC_012850.1 2596374 2597138 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mpo:Mpop_4222 ABC transporter; ABC transporter complement(2596374..2597138) Rhizobium leguminosarum bv. trifolii WSM1325 8013560 YP_002976406.1 CDS Rleg_2600 NC_012850.1 2597135 2598175 R PFAM: transport system permease protein; KEGG: mpo:Mpop_4223 transport system permease protein; ABC transporter permease complement(2597135..2598175) Rhizobium leguminosarum bv. trifolii WSM1325 8013561 YP_002976407.1 CDS Rleg_2601 NC_012850.1 2598172 2599188 R PFAM: periplasmic binding protein; KEGG: oan:Oant_3916 periplasmic binding protein; periplasmic binding protein complement(2598172..2599188) Rhizobium leguminosarum bv. trifolii WSM1325 8013562 YP_002976408.1 CDS Rleg_2602 NC_012850.1 2599890 2600147 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: swi:Swit_4667 prevent-host-death family protein; prevent-host-death family protein 2599890..2600147 Rhizobium leguminosarum bv. trifolii WSM1325 8013563 YP_002976409.1 CDS Rleg_2603 NC_012850.1 2600144 2600527 D PFAM: PilT protein domain protein; KEGG: oan:Oant_4706 PilT protein domain protein; PilT protein domain-containing protein 2600144..2600527 Rhizobium leguminosarum bv. trifolii WSM1325 8013564 YP_002976410.1 CDS Rleg_2604 NC_012850.1 2600559 2601839 R PFAM: protein of unknown function DUF442; beta-lactamase; KEGG: ret:RHE_CH02621 metallo-beta-lactamase family protein; hypothetical protein complement(2600559..2601839) Rhizobium leguminosarum bv. trifolii WSM1325 8013565 YP_002976411.1 CDS Rleg_2605 NC_012850.1 2602021 2602389 R PFAM: DsrE family protein; KEGG: mpt:Mpe_A1006 uncharacterized protein involved in oxidation of intracellular sulfur; DsrE family protein complement(2602021..2602389) Rhizobium leguminosarum bv. trifolii WSM1325 8013566 YP_002976412.1 CDS Rleg_2606 NC_012850.1 2602459 2603454 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A1005 AraC family transcriptional regulator; AraC family transcriptional regulator 2602459..2603454 Rhizobium leguminosarum bv. trifolii WSM1325 8013567 YP_002976413.1 CDS Rleg_2607 NC_012850.1 2603580 2605049 D KEGG: mrd:Mrad2831_4235 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; signal transduction histidine kinase 2603580..2605049 Rhizobium leguminosarum bv. trifolii WSM1325 8015705 YP_002976414.1 CDS Rleg_2608 NC_012850.1 2605051 2605395 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sme:SMa0114 two-component response regulator; response regulator receiver protein 2605051..2605395 Rhizobium leguminosarum bv. trifolii WSM1325 8013568 YP_002976415.1 CDS Rleg_2609 NC_012850.1 2605500 2605982 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_PE00168 hypothetical protein; cupin complement(2605500..2605982) Rhizobium leguminosarum bv. trifolii WSM1325 8013569 YP_002976416.1 CDS Rleg_2610 NC_012850.1 2606028 2606408 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lactoylglutathione lyase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2606028..2606408) Rhizobium leguminosarum bv. trifolii WSM1325 8013570 YP_002976417.1 CDS Rleg_2611 NC_012850.1 2606770 2607306 D KEGG: sme:SMc01535 hypothetical protein; hypothetical protein 2606770..2607306 Rhizobium leguminosarum bv. trifolii WSM1325 8013571 YP_002976418.1 CDS Rleg_2612 NC_012850.1 2607487 2608473 D PFAM: aldo/keto reductase; KEGG: bja:bll4597 aldo-keto reductase; aldo/keto reductase 2607487..2608473 Rhizobium leguminosarum bv. trifolii WSM1325 8013572 YP_002976419.1 CDS Rleg_2613 NC_012850.1 2608833 2609081 R KEGG: rec:RHECIAT_CH0002752 hypothetical protein; hypothetical protein complement(2608833..2609081) Rhizobium leguminosarum bv. trifolii WSM1325 8013573 YP_002976420.1 CDS Rleg_2614 NC_012850.1 2609315 2609803 R KEGG: hypothetical protein; hypothetical protein complement(2609315..2609803) Rhizobium leguminosarum bv. trifolii WSM1325 8013574 YP_002976421.1 CDS Rleg_2615 NC_012850.1 2609949 2610638 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: phoP; two component response regulator; transcriptional regulator 2609949..2610638 Rhizobium leguminosarum bv. trifolii WSM1325 8013575 YP_002976422.1 CDS Rleg_2616 NC_012850.1 2610635 2612059 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: phoQ; two component sensor kinase; histidine kinase 2610635..2612059 Rhizobium leguminosarum bv. trifolii WSM1325 8013576 YP_002976423.1 CDS Rleg_2617 NC_012850.1 2612462 2613070 D hypothetical protein 2612462..2613070 Rhizobium leguminosarum bv. trifolii WSM1325 8013577 YP_002976424.1 CDS Rleg_2618 NC_012850.1 2613536 2614555 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2613536..2614555 Rhizobium leguminosarum bv. trifolii WSM1325 8013578 YP_002976425.1 CDS Rleg_2619 NC_012850.1 2614680 2614892 R KEGG: ret:RHE_PF00327 hypothetical protein; hypothetical protein complement(2614680..2614892) Rhizobium leguminosarum bv. trifolii WSM1325 8013579 YP_002976426.1 CDS Rleg_2620 NC_012850.1 2615244 2616785 R TIGRFAM: outer membrane adhesin like proteiin; KEGG: rec:RHECIAT_CH0002754 fusion protein: autoaggregation protein and hypothetical conserved protein; outer membrane adhesin-like protein complement(2615244..2616785) Rhizobium leguminosarum bv. trifolii WSM1325 8013580 YP_002976427.1 CDS Rleg_2621 NC_012850.1 2617264 2617674 D KEGG: ret:RHE_PE00429 hypothetical protein; hypothetical protein 2617264..2617674 Rhizobium leguminosarum bv. trifolii WSM1325 8013581 YP_002976428.1 CDS Rleg_2622 NC_012850.1 2617932 2618342 D KEGG: ret:RHE_PE00429 hypothetical protein; hypothetical protein 2617932..2618342 Rhizobium leguminosarum bv. trifolii WSM1325 8013582 YP_002976429.1 CDS Rleg_2623 NC_012850.1 2618415 2618873 R KEGG: rec:RHECIAT_CH0000572 hypothetical protein; hypothetical protein complement(2618415..2618873) Rhizobium leguminosarum bv. trifolii WSM1325 8013583 YP_002976430.1 CDS Rleg_2624 NC_012850.1 2618994 2619818 R SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0002756 transcriptional regulator protein; XRE family transcriptional regulator complement(2618994..2619818) Rhizobium leguminosarum bv. trifolii WSM1325 8013584 YP_002976431.1 CDS Rleg_2625 NC_012850.1 2619909 2620799 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0002757 polysaccharide synthesis protein (nucleoside-diphosphate-sugar epimerase); NAD-dependent epimerase/dehydratase 2619909..2620799 Rhizobium leguminosarum bv. trifolii WSM1325 8013585 YP_002976432.1 CDS Rleg_2626 NC_012850.1 2620900 2621109 R KEGG: ret:RHE_CH02629 hypothetical protein; hypothetical protein complement(2620900..2621109) Rhizobium leguminosarum bv. trifolii WSM1325 8013586 YP_002976433.1 CDS Rleg_2627 NC_012850.1 2621111 2621311 R KEGG: ret:RHE_CH02630 hypothetical protein; hypothetical protein complement(2621111..2621311) Rhizobium leguminosarum bv. trifolii WSM1325 8013587 YP_002976434.1 CDS Rleg_2628 NC_012850.1 2621393 2621818 R KEGG: rec:RHECIAT_CH0002759 hypothetical protein; hypothetical protein complement(2621393..2621818) Rhizobium leguminosarum bv. trifolii WSM1325 8013588 YP_002976435.1 CDS Rleg_2629 NC_012850.1 2621922 2622095 D KEGG: rec:RHECIAT_CH0002760 hypothetical protein; hypothetical protein 2621922..2622095 Rhizobium leguminosarum bv. trifolii WSM1325 8013589 YP_002976436.1 CDS Rleg_2630 NC_012850.1 2622270 2623202 D KEGG: mpo:Mpop_1272 hypothetical protein; hypothetical protein 2622270..2623202 Rhizobium leguminosarum bv. trifolii WSM1325 8013590 YP_002976437.1 CDS Rleg_2631 NC_012850.1 2623276 2623719 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ret:RHE_CH02636 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(2623276..2623719) Rhizobium leguminosarum bv. trifolii WSM1325 8013591 YP_002976438.1 CDS Rleg_2632 NC_012850.1 2623940 2624353 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH02637 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(2623940..2624353) Rhizobium leguminosarum bv. trifolii WSM1325 8013592 YP_002976439.1 CDS Rleg_2633 NC_012850.1 2624399 2625091 R PFAM: ThiJ/PfpI domain protein; KEGG: ret:RHE_CH02638 intracellular protease/amidase protein; ThiJ/PfpI domain-containing protein complement(2624399..2625091) Rhizobium leguminosarum bv. trifolii WSM1325 8013593 YP_002976440.1 CDS Rleg_2635 NC_012850.1 2625607 2626146 R KEGG: mxa:MXAN_2139 hypothetical protein; hypothetical protein complement(2625607..2626146) Rhizobium leguminosarum bv. trifolii WSM1325 8015706 YP_002976441.1 CDS Rleg_2636 NC_012850.1 2626270 2626938 D PFAM: regulatory protein TetR; KEGG: jan:Jann_2416 TetR family transcriptional regulator; TetR family transcriptional regulator 2626270..2626938 Rhizobium leguminosarum bv. trifolii WSM1325 8013595 YP_002976442.1 CDS Rleg_2637 NC_012850.1 2627172 2627663 D KEGG: ret:RHE_CH02664 hypothetical protein; hypothetical protein 2627172..2627663 Rhizobium leguminosarum bv. trifolii WSM1325 8013596 YP_002976443.1 CDS ectC NC_012850.1 2627838 2628224 R N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase complement(2627838..2628224) Rhizobium leguminosarum bv. trifolii WSM1325 8015707 YP_002976444.1 CDS Rleg_2639 NC_012850.1 2628355 2629233 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0001023 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 2628355..2629233 Rhizobium leguminosarum bv. trifolii WSM1325 8013597 YP_002976445.1 CDS Rleg_2640 NC_012850.1 2629456 2631111 D KEGG: rec:RHECIAT_CH0002773 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2629456..2631111 Rhizobium leguminosarum bv. trifolii WSM1325 8013598 YP_002976446.1 CDS Rleg_2641 NC_012850.1 2631186 2631698 D KEGG: ret:RHE_CH02646 hypothetical protein; hypothetical protein 2631186..2631698 Rhizobium leguminosarum bv. trifolii WSM1325 8013599 YP_002976447.1 CDS Rleg_2642 NC_012850.1 2631695 2632867 D PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: rec:RHECIAT_CH0002775 probable menaquinone biosynthesis methyltransferase protein; type 11 methyltransferase 2631695..2632867 Rhizobium leguminosarum bv. trifolii WSM1325 8013600 YP_002976448.1 CDS Rleg_2643 NC_012850.1 2632867 2635224 D PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; Cache domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0002776 transcriptional regulator protein; protein serine/threonine phosphatase 2632867..2635224 Rhizobium leguminosarum bv. trifolii WSM1325 8015708 YP_002976449.1 CDS Rleg_2644 NC_012850.1 2635228 2635788 D KEGG: rec:RHECIAT_CH0002777 hypothetical protein; hypothetical protein 2635228..2635788 Rhizobium leguminosarum bv. trifolii WSM1325 8013601 YP_002976450.1 CDS Rleg_2645 NC_012850.1 2635796 2636134 D KEGG: ret:RHE_CH02650 hypothetical protein; hypothetical protein 2635796..2636134 Rhizobium leguminosarum bv. trifolii WSM1325 8013602 YP_002976451.1 CDS Rleg_2647 NC_012850.1 2636703 2637347 D KEGG: ret:RHE_CH02652 hypothetical protein; hypothetical protein 2636703..2637347 Rhizobium leguminosarum bv. trifolii WSM1325 8013603 YP_002976452.1 CDS Rleg_2648 NC_012850.1 2637731 2639863 R PFAM: Glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: lacZ1; beta-D-galactosidase protein; beta-galactosidase complement(2637731..2639863) Rhizobium leguminosarum bv. trifolii WSM1325 8013604 YP_002976453.1 CDS Rleg_2649 NC_012850.1 2639881 2641026 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sugar ABC transporter; ABC transporter complement(2639881..2641026) Rhizobium leguminosarum bv. trifolii WSM1325 8013605 YP_002976454.1 CDS Rleg_2650 NC_012850.1 2641073 2641924 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002795 probable sugar ABC transporter, permease protein; ABC transporter permease complement(2641073..2641924) Rhizobium leguminosarum bv. trifolii WSM1325 8013606 YP_002976455.1 CDS Rleg_2651 NC_012850.1 2641924 2642808 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02659 sugar ABC transporter, permease protein; ABC transporter permease complement(2641924..2642808) Rhizobium leguminosarum bv. trifolii WSM1325 8013607 YP_002976456.1 CDS Rleg_2652 NC_012850.1 2642942 2644216 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0002797 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(2642942..2644216) Rhizobium leguminosarum bv. trifolii WSM1325 8013608 YP_002976457.1 CDS Rleg_2653 NC_012850.1 2644412 2645629 D PFAM: ROK family protein; KEGG: rec:RHECIAT_CH0002798 probable transcriptional regulator protein, ROK family; ROK family protein 2644412..2645629 Rhizobium leguminosarum bv. trifolii WSM1325 8013609 YP_002976458.1 CDS Rleg_2654 NC_012850.1 2645956 2646342 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH02663 hypothetical protein; cupin 2645956..2646342 Rhizobium leguminosarum bv. trifolii WSM1325 8013610 YP_002976459.1 CDS Rleg_2655 NC_012850.1 2646488 2647069 R PFAM: conserved hypothetical protein; KEGG: dvm:DvMF_1885 hypothetical protein; hypothetical protein complement(2646488..2647069) Rhizobium leguminosarum bv. trifolii WSM1325 8013611 YP_002976460.1 CDS Rleg_2656 NC_012850.1 2647122 2647742 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pol:Bpro_5175 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(2647122..2647742) Rhizobium leguminosarum bv. trifolii WSM1325 8013612 YP_002976461.1 CDS Rleg_2658 NC_012850.1 2649474 2649929 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: eba:ebA6753 hypothetical protein; alkylhydroperoxidase 2649474..2649929 Rhizobium leguminosarum bv. trifolii WSM1325 8013613 YP_002976462.1 CDS Rleg_2659 NC_012850.1 2649953 2650345 D PFAM: small multidrug resistance protein; KEGG: reu:Reut_A2608 small multidrug resistance protein; small multidrug resistance protein 2649953..2650345 Rhizobium leguminosarum bv. trifolii WSM1325 8013614 YP_002976463.1 CDS Rleg_2660 NC_012850.1 2650487 2651134 D hypothetical protein 2650487..2651134 Rhizobium leguminosarum bv. trifolii WSM1325 8013615 YP_002976464.1 CDS Rleg_2661 NC_012850.1 2651106 2651720 D SMART: exonuclease; KEGG: hypothetical protein; exonuclease 2651106..2651720 Rhizobium leguminosarum bv. trifolii WSM1325 8015711 YP_002976465.1 CDS Rleg_2662 NC_012850.1 2651747 2652610 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH02665 transporter, permease protein; hypothetical protein complement(2651747..2652610) Rhizobium leguminosarum bv. trifolii WSM1325 8013616 YP_002976466.1 CDS Rleg_2663 NC_012850.1 2652701 2654110 D PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0002801 transcriptional regulator protein, GntR family; GntR family transcriptional regulator 2652701..2654110 Rhizobium leguminosarum bv. trifolii WSM1325 8015712 YP_002976467.1 CDS Rleg_2664 NC_012850.1 2654326 2655273 R PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: hne:HNE_3446 ISHne3, transposase; transposase IS116/IS110/IS902 family protein complement(2654326..2655273) Rhizobium leguminosarum bv. trifolii WSM1325 8013617 YP_002976468.1 CDS Rleg_2665 NC_012850.1 2655462 2655863 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0002803 two-component response regulator protein; response regulator receiver protein complement(2655462..2655863) Rhizobium leguminosarum bv. trifolii WSM1325 8013618 YP_002976469.1 CDS Rleg_2666 NC_012850.1 2655874 2657634 R PFAM: CHASE4 domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH02668 two-component sensor histidine kinase protein; histidine kinase complement(2655874..2657634) Rhizobium leguminosarum bv. trifolii WSM1325 8015713 YP_002976470.1 CDS Rleg_2667 NC_012850.1 2657704 2658240 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0002805 acetyltransferase protein; N-acetyltransferase GCN5 2657704..2658240 Rhizobium leguminosarum bv. trifolii WSM1325 8013619 YP_002976471.1 CDS Rleg_2668 NC_012850.1 2658395 2659267 D hypothetical protein 2658395..2659267 Rhizobium leguminosarum bv. trifolii WSM1325 8013620 YP_002976472.1 CDS Rleg_2669 NC_012850.1 2659335 2660249 R PFAM: aryldialkylphosphatase; KEGG: vei:Veis_1477 aryldialkylphosphatase; aryldialkylphosphatase complement(2659335..2660249) Rhizobium leguminosarum bv. trifolii WSM1325 8013621 YP_002976473.1 CDS Rleg_2670 NC_012850.1 2660467 2661123 R KEGG: rec:RHECIAT_CH0002806 hypothetical protein; hypothetical protein complement(2660467..2661123) Rhizobium leguminosarum bv. trifolii WSM1325 8013622 YP_002976474.1 CDS Rleg_2671 NC_012850.1 2661173 2662393 R KEGG: ret:RHE_CH02671 hypothetical protein; hypothetical protein complement(2661173..2662393) Rhizobium leguminosarum bv. trifolii WSM1325 8013623 YP_002976475.1 CDS Rleg_2672 NC_012850.1 2662513 2663310 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rec:RHECIAT_CH0002808 hypothetical protein; hypothetical protein 2662513..2663310 Rhizobium leguminosarum bv. trifolii WSM1325 8013624 YP_002976476.1 CDS Rleg_2673 NC_012850.1 2663316 2663675 D KEGG: rec:RHECIAT_CH0002809 hypothetical protein; hypothetical protein 2663316..2663675 Rhizobium leguminosarum bv. trifolii WSM1325 8013625 YP_002976477.1 CDS Rleg_2674 NC_012850.1 2663859 2664500 R PFAM: metallophosphoesterase; KEGG: sme:SM_b21213 serinethreonine protein phosphatase; metallophosphoesterase complement(2663859..2664500) Rhizobium leguminosarum bv. trifolii WSM1325 8013626 YP_002976478.1 CDS Rleg_2675 NC_012850.1 2664780 2665403 D KEGG: rsh:Rsph17029_3222 hypothetical protein; hypothetical protein 2664780..2665403 Rhizobium leguminosarum bv. trifolii WSM1325 8013627 YP_002976479.1 CDS Rleg_2676 NC_012850.1 2665573 2666595 D PFAM: Luciferase-like monooxygenase; KEGG: ret:RHE_CH02675 alkanal monooxygenase-like protein; luciferase-like monooxygenase 2665573..2666595 Rhizobium leguminosarum bv. trifolii WSM1325 8013628 YP_002976480.1 CDS Rleg_2677 NC_012850.1 2666620 2667444 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH02597 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2666620..2667444) Rhizobium leguminosarum bv. trifolii WSM1325 8013629 YP_002976481.1 CDS Rleg_2678 NC_012850.1 2667542 2668465 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: rec:RHECIAT_CH0002722 dioxygenase protein; Phytanoyl-CoA dioxygenase 2667542..2668465 Rhizobium leguminosarum bv. trifolii WSM1325 8013630 YP_002976482.1 CDS Rleg_2679 NC_012850.1 2668690 2669622 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002813 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 2668690..2669622 Rhizobium leguminosarum bv. trifolii WSM1325 8013631 YP_002976483.1 CDS Rleg_2680 NC_012850.1 2669609 2670853 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH02677 efflux transporter protein; major facilitator superfamily protein complement(2669609..2670853) Rhizobium leguminosarum bv. trifolii WSM1325 8013632 YP_002976484.1 CDS Rleg_2681 NC_012850.1 2670850 2671494 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ret:RHE_CH02678 ArsR family transcriptional regulator; SNP /replace=T; ArsR family transcriptional regulator complement(2670850..2671494) Rhizobium leguminosarum bv. trifolii WSM1325 8013633 YP_002976485.1 CDS Rleg_2682 NC_012850.1 2671568 2672671 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rec:RHECIAT_CH0002821 probable adenylate cyclase protein; adenylate/guanylate cyclase complement(2671568..2672671) Rhizobium leguminosarum bv. trifolii WSM1325 8013634 YP_002976486.1 CDS Rleg_2683 NC_012850.1 2672955 2673179 D KEGG: rec:RHECIAT_CH0002822 hypothetical protein; hypothetical protein 2672955..2673179 Rhizobium leguminosarum bv. trifolii WSM1325 8013635 YP_002976487.1 CDS Rleg_2684 NC_012850.1 2673295 2673603 R KEGG: ret:RHE_CH02686 hypothetical protein; hypothetical protein complement(2673295..2673603) Rhizobium leguminosarum bv. trifolii WSM1325 8013636 YP_002976488.1 CDS Rleg_2685 NC_012850.1 2673789 2674235 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rec:RHECIAT_CH0002824 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(2673789..2674235) Rhizobium leguminosarum bv. trifolii WSM1325 8013637 YP_002976489.1 CDS Rleg_2686 NC_012850.1 2674696 2675130 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; riboflavin synthase subunit beta 2674696..2675130 Rhizobium leguminosarum bv. trifolii WSM1325 8015714 YP_002976490.1 CDS Rleg_2687 NC_012850.1 2675198 2675968 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A4032 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2675198..2675968) Rhizobium leguminosarum bv. trifolii WSM1325 8013638 YP_002976491.1 CDS Rleg_2688 NC_012850.1 2676033 2676878 R PFAM: alpha/beta hydrolase fold; KEGG: mno:Mnod_1454 alpha/beta hydrolase; alpha/beta hydrolase complement(2676033..2676878) Rhizobium leguminosarum bv. trifolii WSM1325 8013639 YP_002976492.1 CDS Rleg_2689 NC_012850.1 2676925 2677524 R PFAM: protein of unknown function DUF1211; KEGG: cti:RALTA_B1737 conserved hypothetical protein; membrane; DUF1211; hypothetical protein complement(2676925..2677524) Rhizobium leguminosarum bv. trifolii WSM1325 8013640 YP_002976493.1 CDS Rleg_2690 NC_012850.1 2677563 2678273 R KEGG: bpy:Bphyt_7175 hypothetical protein; hypothetical protein complement(2677563..2678273) Rhizobium leguminosarum bv. trifolii WSM1325 8013641 YP_002976494.1 CDS Rleg_2691 NC_012850.1 2678436 2679056 D PFAM: protein of unknown function DUF1470; KEGG: bja:bll6575 hypothetical protein; hypothetical protein 2678436..2679056 Rhizobium leguminosarum bv. trifolii WSM1325 8013642 YP_002976495.1 CDS Rleg_2692 NC_012850.1 2679244 2679933 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0002826 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 2679244..2679933 Rhizobium leguminosarum bv. trifolii WSM1325 8013643 YP_002976496.1 CDS Rleg_2694 NC_012850.1 2680202 2681086 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: atc:AGR_L_3463 hypothetical protein; LysR family transcriptional regulator complement(2680202..2681086) Rhizobium leguminosarum bv. trifolii WSM1325 8013645 YP_002976497.1 CDS ampC NC_012850.1 2681210 2682367 D PFAM: beta-lactamase; KEGG: atc:AGR_L_3464 AmpC cephalosporinase precursor protein ACC-1b; beta-lactamase 2681210..2682367 Rhizobium leguminosarum bv. trifolii WSM1325 8013646 YP_002976498.1 CDS Rleg_2696 NC_012850.1 2682491 2683267 R PFAM: protein of unknown function DUF1194; KEGG: rec:RHECIAT_CH0002827 hypothetical protein; hypothetical protein complement(2682491..2683267) Rhizobium leguminosarum bv. trifolii WSM1325 8013647 YP_002976499.1 CDS Rleg_2697 NC_012850.1 2683381 2684283 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH02691 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2683381..2684283) Rhizobium leguminosarum bv. trifolii WSM1325 8013648 YP_002976500.1 CDS Rleg_2698 NC_012850.1 2684477 2685202 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0002829 3-oxoacyl-[acyl-carrier-protein] reductase protein; short-chain dehydrogenase/reductase SDR 2684477..2685202 Rhizobium leguminosarum bv. trifolii WSM1325 8013649 YP_002976501.1 CDS Rleg_2699 NC_012850.1 2685196 2685684 D PFAM: endoribonuclease L-PSP; KEGG: rec:RHECIAT_CH0002830 translation initiation inhibitor protein; endoribonuclease L-PSP 2685196..2685684 Rhizobium leguminosarum bv. trifolii WSM1325 8013650 YP_002976502.1 CDS Rleg_2700 NC_012850.1 2685902 2686441 R KEGG: rec:RHECIAT_CH0002831 hypothetical protein; hypothetical protein complement(2685902..2686441) Rhizobium leguminosarum bv. trifolii WSM1325 8013651 YP_002976503.1 CDS Rleg_2701 NC_012850.1 2686570 2690283 D PFAM: FecR protein; TPR repeat-containing protein; SMART: tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0002832 exported protein, TonB-dependent receptor; FecR protein 2686570..2690283 Rhizobium leguminosarum bv. trifolii WSM1325 8013652 YP_002976504.1 CDS Rleg_2702 NC_012850.1 2690283 2692253 D PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH02696 adenylate cyclase protein; adenylate/guanylate cyclase 2690283..2692253 Rhizobium leguminosarum bv. trifolii WSM1325 8013653 YP_002976505.1 CDS Rleg_2703 NC_012850.1 2692310 2693200 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sme:SM_b20715 transcriptional regulator, LysR family protein; LysR family transcriptional regulator complement(2692310..2693200) Rhizobium leguminosarum bv. trifolii WSM1325 8013654 YP_002976506.1 CDS Rleg_2704 NC_012850.1 2693373 2694266 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SM_b20716 hypothetical protein; hypothetical protein 2693373..2694266 Rhizobium leguminosarum bv. trifolii WSM1325 8013655 YP_002976507.1 CDS Rleg_2705 NC_012850.1 2694316 2695068 R KEGG: ret:RHE_CH02700 nucleotidyltransferase protein; nucleotidyltransferase protein complement(2694316..2695068) Rhizobium leguminosarum bv. trifolii WSM1325 8015715 YP_002976508.1 CDS Rleg_2706 NC_012850.1 2695352 2696047 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ret:RHE_CH02701 fumarylpyruvate hydrolase protein; SNP /replace=C; fumarylacetoacetate (FAA) hydrolase 2695352..2696047 Rhizobium leguminosarum bv. trifolii WSM1325 8013656 YP_002976509.1 CDS Rleg_2707 NC_012850.1 2696058 2696588 D KEGG: ret:RHE_CH02702 acetyltransferase protein; acetyltransferase 2696058..2696588 Rhizobium leguminosarum bv. trifolii WSM1325 8013657 YP_002976510.1 CDS Rleg_2708 NC_012850.1 2696921 2697868 D PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: hne:HNE_3446 ISHne3, transposase; transposase IS116/IS110/IS902 family protein 2696921..2697868 Rhizobium leguminosarum bv. trifolii WSM1325 8013658 YP_002976511.1 CDS Rleg_2709 NC_012850.1 2697943 2698650 R PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: rec:RHECIAT_CH0002840 isoprenylcysteine methyltransferase protein; isoprenylcysteine carboxyl methyltransferase complement(2697943..2698650) Rhizobium leguminosarum bv. trifolii WSM1325 8013659 YP_002976512.1 CDS Rleg_2710 NC_012850.1 2698740 2699141 R KEGG: ret:RHE_CH02704 hypothetical protein; hypothetical protein complement(2698740..2699141) Rhizobium leguminosarum bv. trifolii WSM1325 8013660 YP_002976513.1 CDS Rleg_2711 NC_012850.1 2699470 2699841 D KEGG: ret:RHE_CH02705 hypothetical protein; hypothetical protein 2699470..2699841 Rhizobium leguminosarum bv. trifolii WSM1325 8013661 YP_002976514.1 CDS Rleg_2712 NC_012850.1 2700334 2700750 R PFAM: protein of unknown function DUF1486; KEGG: ret:RHE_CH02706 hypothetical protein; hypothetical protein complement(2700334..2700750) Rhizobium leguminosarum bv. trifolii WSM1325 8013662 YP_002976515.1 CDS Rleg_2713 NC_012850.1 2700840 2701415 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: ret:RHE_CH02707 hypothetical protein; transglutaminase complement(2700840..2701415) Rhizobium leguminosarum bv. trifolii WSM1325 8013663 YP_002976516.1 CDS Rleg_2714 NC_012850.1 2701608 2702711 D KEGG: rec:RHECIAT_CH0002843 hypothetical protein; hypothetical protein 2701608..2702711 Rhizobium leguminosarum bv. trifolii WSM1325 8013664 YP_002976517.1 CDS Rleg_2715 NC_012850.1 2702869 2703267 R KEGG: rec:RHECIAT_CH0002845 zinc uptake transcriptional regulator protein, Fur family; zinc uptake transcriptional regulator protein complement(2702869..2703267) Rhizobium leguminosarum bv. trifolii WSM1325 8013665 YP_002976518.1 CDS Rleg_2716 NC_012850.1 2703264 2704079 R PFAM: ABC transporter; KEGG: rec:RHECIAT_CH0002846 zinc uptake ABC transporter, permease protein; ABC transporter complement(2703264..2704079) Rhizobium leguminosarum bv. trifolii WSM1325 8013666 YP_002976519.1 CDS Rleg_2717 NC_012850.1 2704072 2704986 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002847 zinc uptake ABC transporter, ATP-binding protein; ABC transporter complement(2704072..2704986) Rhizobium leguminosarum bv. trifolii WSM1325 8013667 YP_002976520.1 CDS Rleg_2718 NC_012850.1 2705089 2706123 D PFAM: periplasmic solute binding protein; KEGG: rec:RHECIAT_CH0002848 zinc uptake ABC transporter, substrate-binding protein; periplasmic solute binding protein 2705089..2706123 Rhizobium leguminosarum bv. trifolii WSM1325 8015716 YP_002976521.1 CDS Rleg_2719 NC_012850.1 2706270 2707475 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rec:RHECIAT_CH0002849 probable cobalamin biosynthesis protein; cobalamin synthesis protein P47K 2706270..2707475 Rhizobium leguminosarum bv. trifolii WSM1325 8013668 YP_002976522.1 CDS Rleg_2720 NC_012850.1 2707472 2707648 D KEGG: rec:RHECIAT_CH0002850 hypothetical protein; hypothetical protein 2707472..2707648 Rhizobium leguminosarum bv. trifolii WSM1325 8013669 YP_002976523.1 CDS Rleg_2721 NC_012850.1 2707923 2708231 R KEGG: rec:RHECIAT_CH0002851 hypothetical protein; hypothetical protein complement(2707923..2708231) Rhizobium leguminosarum bv. trifolii WSM1325 8013670 YP_002976524.1 CDS Rleg_2722 NC_012850.1 2708757 2709140 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0002853 glyoxalase/bleomycin resistance-like protein; glyoxalase/bleomycin resistance protein/dioxygenase 2708757..2709140 Rhizobium leguminosarum bv. trifolii WSM1325 8015717 YP_002976525.1 CDS Rleg_2723 NC_012850.1 2709319 2710650 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: rec:RHECIAT_CH0002854 probable hemolysin protein; hypothetical protein 2709319..2710650 Rhizobium leguminosarum bv. trifolii WSM1325 8013671 YP_002976526.1 CDS Rleg_2724 NC_012850.1 2710666 2712087 R TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rec:RHECIAT_CH0002855 chromate transporter protein; chromate ion transporter family chromate transporter complement(2710666..2712087) Rhizobium leguminosarum bv. trifolii WSM1325 8013672 YP_002976527.1 CDS Rleg_2725 NC_012850.1 2712089 2712904 R SMART: Rhodanese domain protein; KEGG: ret:RHE_CH02717 superoxide dismutase SodM-like protein; rhodanese domain-containing protein complement(2712089..2712904) Rhizobium leguminosarum bv. trifolii WSM1325 8015718 YP_002976528.1 CDS Rleg_2726 NC_012850.1 2713283 2713591 D KEGG: rec:RHECIAT_CH0002857 hypothetical protein; hypothetical protein 2713283..2713591 Rhizobium leguminosarum bv. trifolii WSM1325 8013673 YP_002976529.1 CDS Rleg_2727 NC_012850.1 2713812 2714114 R KEGG: ret:RHE_CH02718 hypothetical protein; hypothetical protein complement(2713812..2714114) Rhizobium leguminosarum bv. trifolii WSM1325 8013674 YP_002976530.1 CDS Rleg_2728 NC_012850.1 2714363 2714677 D hypothetical protein 2714363..2714677 Rhizobium leguminosarum bv. trifolii WSM1325 8013675 YP_002976531.1 CDS Rleg_2729 NC_012850.1 2714754 2715050 R KEGG: rec:RHECIAT_CH0002859 hypothetical protein; hypothetical protein complement(2714754..2715050) Rhizobium leguminosarum bv. trifolii WSM1325 8013676 YP_002976532.1 CDS Rleg_2730 NC_012850.1 2715486 2716397 R TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: rec:RHECIAT_CH0002863 phenazine antibiotic biosynthesis protein; phenazine biosynthesis protein PhzF family protein complement(2715486..2716397) Rhizobium leguminosarum bv. trifolii WSM1325 8013678 YP_002976533.1 CDS Rleg_2731 NC_012850.1 2716563 2717336 R PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0002864 NTP pyrophosphohydrolase protein, MuT/NUDIX family; NUDIX hydrolase complement(2716563..2717336) Rhizobium leguminosarum bv. trifolii WSM1325 8013679 YP_002976534.1 CDS Rleg_2732 NC_012850.1 2717333 2718442 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: rec:RHECIAT_CH0002865 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase complement(2717333..2718442) Rhizobium leguminosarum bv. trifolii WSM1325 8013680 YP_002976535.1 CDS Rleg_2733 NC_012850.1 2718641 2719003 D KEGG: hypothetical protein; hypothetical protein 2718641..2719003 Rhizobium leguminosarum bv. trifolii WSM1325 8013681 YP_002976536.1 CDS Rleg_2734 NC_012850.1 2719711 2720730 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002866 iron(III) ABC transporter, ATP-binding protein; ABC transporter complement(2719711..2720730) Rhizobium leguminosarum bv. trifolii WSM1325 8013682 YP_002976537.1 CDS Rleg_2735 NC_012850.1 2720718 2722412 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02724 iron(III) ABC transporter, permease protein; ABC transporter permease complement(2720718..2722412) Rhizobium leguminosarum bv. trifolii WSM1325 8013683 YP_002976538.1 CDS Rleg_2736 NC_012850.1 2722420 2723397 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0002868 iron(III) ABC transporter, substrate-binding protein; SNP /replace=T; extracellular solute-binding protein complement(2722420..2723397) Rhizobium leguminosarum bv. trifolii WSM1325 8013684 YP_002976539.1 CDS Rleg_2737 NC_012850.1 2723687 2724454 R PFAM: alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0002869 hydrolase protein; alpha/beta hydrolase complement(2723687..2724454) Rhizobium leguminosarum bv. trifolii WSM1325 8013685 YP_002976540.1 CDS Rleg_2738 NC_012850.1 2724683 2725153 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_CH02727 MarR family transcriptional regulator; MarR family transcriptional regulator 2724683..2725153 Rhizobium leguminosarum bv. trifolii WSM1325 8013686 YP_002976541.1 CDS Rleg_2739 NC_012850.1 2725377 2726435 D PFAM: aldo/keto reductase; KEGG: ret:RHE_CH02728 oxidoreductase protein; aldo/keto reductase 2725377..2726435 Rhizobium leguminosarum bv. trifolii WSM1325 8013687 YP_002976542.1 CDS Rleg_2741 NC_012850.1 2727715 2728932 R PFAM: aminotransferase class I and II; KEGG: rec:RHECIAT_CH0002872 probable aminotransferase protein; GntR family transcriptional regulator complement(2727715..2728932) Rhizobium leguminosarum bv. trifolii WSM1325 8013689 YP_002976543.1 CDS Rleg_2742 NC_012850.1 2729320 2730420 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2729320..2730420 Rhizobium leguminosarum bv. trifolii WSM1325 8015719 YP_002976544.1 CDS Rleg_2743 NC_012850.1 2730760 2730969 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: hypothetical protein; AbrC family transcriptional regulator 2730760..2730969 Rhizobium leguminosarum bv. trifolii WSM1325 8013690 YP_002976545.1 CDS Rleg_2744 NC_012850.1 2730969 2731346 D PFAM: PilT protein domain protein; KEGG: hypothetical protein; PilT protein domain-containing protein 2730969..2731346 Rhizobium leguminosarum bv. trifolii WSM1325 8015720 YP_002976546.1 CDS Rleg_2745 NC_012850.1 2731465 2731716 D TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: ret:RHE_CH02731 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 2731465..2731716 Rhizobium leguminosarum bv. trifolii WSM1325 8013691 YP_002976547.1 CDS Rleg_2746 NC_012850.1 2731700 2732035 D PFAM: plasmid stabilization system; KEGG: ret:RHE_CH02732 hypothetical protein; plasmid stabilization system 2731700..2732035 Rhizobium leguminosarum bv. trifolii WSM1325 8013692 YP_002976548.1 CDS Rleg_2747 NC_012850.1 2732025 2732612 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rec:RHECIAT_CH0002875 SAM-dependent methyltransferase protein; type 11 methyltransferase 2732025..2732612 Rhizobium leguminosarum bv. trifolii WSM1325 8013693 YP_002976549.1 CDS Rleg_2748 NC_012850.1 2732655 2733416 R KEGG: hypothetical protein; hypothetical protein complement(2732655..2733416) Rhizobium leguminosarum bv. trifolii WSM1325 8013694 YP_002976550.1 CDS Rleg_2749 NC_012850.1 2733515 2734534 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2733515..2734534) Rhizobium leguminosarum bv. trifolii WSM1325 8013695 YP_002976551.1 CDS Rleg_2750 NC_012850.1 2734584 2735234 R PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0002885 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(2734584..2735234) Rhizobium leguminosarum bv. trifolii WSM1325 8013696 YP_002976552.1 CDS Rleg_2751 NC_012850.1 2735425 2735871 D KEGG: rec:RHECIAT_CH0002886 hypothetical protein; hypothetical protein 2735425..2735871 Rhizobium leguminosarum bv. trifolii WSM1325 8013697 YP_002976553.1 CDS Rleg_2752 NC_012850.1 2735895 2736260 D KEGG: bmn:BMA10247_A2120 hypothetical protein; hypothetical protein 2735895..2736260 Rhizobium leguminosarum bv. trifolii WSM1325 8013698 YP_002976554.1 CDS Rleg_2753 NC_012850.1 2736272 2737954 R KEGG: rec:RHECIAT_CH0002895 hypothetical protein; hypothetical protein complement(2736272..2737954) Rhizobium leguminosarum bv. trifolii WSM1325 8013699 YP_002976555.1 CDS Rleg_2754 NC_012850.1 2737954 2739012 R PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH02756 glycosyltransferase; family 2 glycosyl transferase complement(2737954..2739012) Rhizobium leguminosarum bv. trifolii WSM1325 8013700 YP_002976556.1 CDS Rleg_2755 NC_012850.1 2739104 2740012 R PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH02757 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2739104..2740012) Rhizobium leguminosarum bv. trifolii WSM1325 8013701 YP_002976557.1 CDS Rleg_2756 NC_012850.1 2740217 2741263 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_CH02758 alcohol dehydrogenase (NADP+) protein; alcohol dehydrogenase zinc-binding domain-containing protein 2740217..2741263 Rhizobium leguminosarum bv. trifolii WSM1325 8013702 YP_002976558.1 CDS Rleg_2757 NC_012850.1 2741323 2743278 R TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor G domain IV; KEGG: rec:RHECIAT_CH0002899 probable tetracycline resistance protein; small GTP-binding protein complement(2741323..2743278) Rhizobium leguminosarum bv. trifolii WSM1325 8013703 YP_002976559.1 CDS Rleg_2758 NC_012850.1 2743488 2744753 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rec:RHECIAT_CH0002900 NADH dehydrogenase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2743488..2744753) Rhizobium leguminosarum bv. trifolii WSM1325 8013704 YP_002976560.1 CDS Rleg_2759 NC_012850.1 2744863 2745327 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_CH0002903 probable transcriptional regulator protein, AsnC family; AsnC family transcriptional regulator complement(2744863..2745327) Rhizobium leguminosarum bv. trifolii WSM1325 8013705 YP_002976561.1 CDS Rleg_2760 NC_012850.1 2745485 2746204 D TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: ret:RHE_CH02763 aspartate racemase protein; aspartate racemase 2745485..2746204 Rhizobium leguminosarum bv. trifolii WSM1325 8013706 YP_002976562.1 CDS Rleg_2761 NC_012850.1 2746437 2747354 D PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0002905 transcriptional regulator protein; MarR family transcriptional regulator 2746437..2747354 Rhizobium leguminosarum bv. trifolii WSM1325 8015721 YP_002976563.1 CDS Rleg_2762 NC_012850.1 2747416 2748039 D PFAM: regulatory protein TetR; KEGG: ret:RHE_CH02765 TetR family transcriptional regulator; TetR family transcriptional regulator 2747416..2748039 Rhizobium leguminosarum bv. trifolii WSM1325 8013707 YP_002976564.1 CDS Rleg_2763 NC_012850.1 2748150 2749358 D PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH02766 antibiotic resistance permease protein; major facilitator superfamily protein 2748150..2749358 Rhizobium leguminosarum bv. trifolii WSM1325 8013708 YP_002976565.1 CDS Rleg_2764 NC_012850.1 2749492 2749722 D KEGG: met:M446_4000 hypothetical protein; hypothetical protein 2749492..2749722 Rhizobium leguminosarum bv. trifolii WSM1325 8013709 YP_002976566.1 CDS Rleg_2765 NC_012850.1 2749752 2750168 R PFAM: helix-turn-helix HxlR type; KEGG: ret:RHE_CH02767 transcriptional regulator protein; HxlR family transcriptional regulator complement(2749752..2750168) Rhizobium leguminosarum bv. trifolii WSM1325 8013710 YP_002976567.1 CDS Rleg_2766 NC_012850.1 2750292 2751197 D PFAM: NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0002909 hypothetical protein; NmrA family protein 2750292..2751197 Rhizobium leguminosarum bv. trifolii WSM1325 8013711 YP_002976568.1 CDS Rleg_2768 NC_012850.1 2751555 2752307 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(2751555..2752307) Rhizobium leguminosarum bv. trifolii WSM1325 8013713 YP_002976569.1 CDS Rleg_2769 NC_012850.1 2752758 2753450 D PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; regulatory protein LuxR; SMART: regulatory protein MerR; regulatory protein LuxR; KEGG: rec:RHECIAT_CH0002912 probable transcriptional regulator protein; MerR family transcriptional regulator 2752758..2753450 Rhizobium leguminosarum bv. trifolii WSM1325 8013714 YP_002976570.1 CDS Rleg_2770 NC_012850.1 2753538 2754665 R KEGG: rec:RHECIAT_CH0002913 exodeoxyribonuclease V protein, alpha subunit; exodeoxyribonuclease V protein subunit alpha complement(2753538..2754665) Rhizobium leguminosarum bv. trifolii WSM1325 8013715 YP_002976571.1 CDS Rleg_2771 NC_012850.1 2754739 2755662 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002914 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(2754739..2755662) Rhizobium leguminosarum bv. trifolii WSM1325 8013716 YP_002976572.1 CDS Rleg_2772 NC_012850.1 2755794 2756273 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: ret:RHE_CH02773 carboxymuconolactone decarboxylase protein; alkylhydroperoxidase 2755794..2756273 Rhizobium leguminosarum bv. trifolii WSM1325 8013717 YP_002976573.1 CDS Rleg_2773 NC_012850.1 2756342 2757097 D PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH02774 hypothetical protein; NmrA family protein 2756342..2757097 Rhizobium leguminosarum bv. trifolii WSM1325 8013718 YP_002976574.1 CDS Rleg_2774 NC_012850.1 2757166 2757582 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH02775 hypothetical protein; cupin 2757166..2757582 Rhizobium leguminosarum bv. trifolii WSM1325 8013719 YP_002976575.1 CDS Rleg_2775 NC_012850.1 2757775 2759256 D PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ret:RHE_CH02776 mechanosensitive ion channel protein; cyclic nucleotide-regulated small mechanosensitive ion channel 2757775..2759256 Rhizobium leguminosarum bv. trifolii WSM1325 8013720 YP_002976576.1 CDS Rleg_2776 NC_012850.1 2759272 2759760 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ret:RHE_CH02777 transcriptional regulator protein; BadM/Rrf2 transcriptional regulator complement(2759272..2759760) Rhizobium leguminosarum bv. trifolii WSM1325 8013721 YP_002976577.1 CDS Rleg_2777 NC_012850.1 2759893 2760444 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: smd:Smed_5709 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2759893..2760444) Rhizobium leguminosarum bv. trifolii WSM1325 8013722 YP_002976578.1 CDS Rleg_2778 NC_012850.1 2760590 2760925 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: smd:Smed_5708 cupin 2 conserved barrel domain protein; cupin 2760590..2760925 Rhizobium leguminosarum bv. trifolii WSM1325 8013723 YP_002976579.1 CDS Rleg_2779 NC_012850.1 2760981 2761397 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr2408 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2760981..2761397 Rhizobium leguminosarum bv. trifolii WSM1325 8013724 YP_002976580.1 CDS Rleg_2780 NC_012850.1 2761554 2761934 D PFAM: Secreted repeat of unknown function; KEGG: rec:RHECIAT_CH0002919 lipoprotein protein; hypothetical protein 2761554..2761934 Rhizobium leguminosarum bv. trifolii WSM1325 8013725 YP_002976581.1 CDS Rleg_2781 NC_012850.1 2761969 2762484 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ret:RHE_CH02779 RNA polymerase sigma factor protein (sigma-24); ECF subfamily RNA polymerase sigma-24 subunit 2761969..2762484 Rhizobium leguminosarum bv. trifolii WSM1325 8013726 YP_002976582.1 CDS Rleg_2782 NC_012850.1 2762481 2763263 D KEGG: ret:RHE_CH02780 hypothetical protein; transmembrane anti-sigma factor 2762481..2763263 Rhizobium leguminosarum bv. trifolii WSM1325 8013727 YP_002976583.1 CDS Rleg_2783 NC_012850.1 2763395 2763748 R KEGG: rec:RHECIAT_CH0002922 hypothetical protein; hypothetical protein complement(2763395..2763748) Rhizobium leguminosarum bv. trifolii WSM1325 8013728 YP_002976584.1 CDS Rleg_2784 NC_012850.1 2763750 2764409 R PFAM: nitrile hydratase beta subunit; KEGG: rec:RHECIAT_CH0002923 nitrile hydratase protein, beta subunit; nitrile hydratase complement(2763750..2764409) Rhizobium leguminosarum bv. trifolii WSM1325 8013729 YP_002976585.1 CDS Rleg_2785 NC_012850.1 2764406 2765059 R KEGG: smd:Smed_2001 nitrile hydratase, alpha subunit; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; nitrile hydratase subunit alpha complement(2764406..2765059) Rhizobium leguminosarum bv. trifolii WSM1325 8013730 YP_002976586.1 CDS Rleg_2786 NC_012850.1 2765157 2766431 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NmrA family protein; KEGG: ret:RHE_CH02785 oxidoreductase protein; NAD-dependent epimerase/dehydratase 2765157..2766431 Rhizobium leguminosarum bv. trifolii WSM1325 8013731 YP_002976587.1 CDS Rleg_2787 NC_012850.1 2766431 2766907 D KEGG: rec:RHECIAT_CH0002926 hypothetical conserved membrane protein; hypothetical protein 2766431..2766907 Rhizobium leguminosarum bv. trifolii WSM1325 8013732 YP_002976588.1 CDS Rleg_2788 NC_012850.1 2766899 2767492 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0002927 probable amino acid efflux protein, LysE family; SNP /replace=A; lysine exporter protein complement(2766899..2767492) Rhizobium leguminosarum bv. trifolii WSM1325 8013733 YP_002976589.1 CDS Rleg_2789 NC_012850.1 2767644 2768492 D PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0002928 aldo-keto reductase family protein; aldo/keto reductase 2767644..2768492 Rhizobium leguminosarum bv. trifolii WSM1325 8013734 YP_002976590.1 CDS ilvH NC_012850.1 2768573 2769145 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2768573..2769145) Rhizobium leguminosarum bv. trifolii WSM1325 8013735 YP_002976591.1 CDS Rleg_2791 NC_012850.1 2769229 2771019 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: rec:RHECIAT_CH0002930 acetolactate synthase III protein, large subunit; acetolactate synthase 3 catalytic subunit complement(2769229..2771019) Rhizobium leguminosarum bv. trifolii WSM1325 8013736 YP_002976592.1 CDS Rleg_2792 NC_012850.1 2771343 2773382 D PFAM: protein of unknown function DUF87; KEGG: rec:RHECIAT_CH0002932 hypothetical protein; hypothetical protein 2771343..2773382 Rhizobium leguminosarum bv. trifolii WSM1325 8013737 YP_002976593.1 CDS Rleg_2793 NC_012850.1 2773367 2774293 R PFAM: dihydrodipicolinate synthetase; KEGG: rec:RHECIAT_CH0002933 dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase complement(2773367..2774293) Rhizobium leguminosarum bv. trifolii WSM1325 8013738 YP_002976594.1 CDS Rleg_2794 NC_012850.1 2774315 2774929 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0002934 probable amino acid efflux protein, LysE family; lysine exporter protein LysE/YggA complement(2774315..2774929) Rhizobium leguminosarum bv. trifolii WSM1325 8013739 YP_002976595.1 CDS Rleg_2795 NC_012850.1 2775081 2776583 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bur:Bcep18194_B0395 GntR family transcriptional regulator; GntR family transcriptional regulator 2775081..2776583 Rhizobium leguminosarum bv. trifolii WSM1325 8013740 YP_002976596.1 CDS miaA NC_012850.1 2776587 2777480 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2776587..2777480) Rhizobium leguminosarum bv. trifolii WSM1325 8015722 YP_002976597.1 CDS Rleg_2797 NC_012850.1 2777482 2778372 D KEGG: rec:RHECIAT_CH0002937 phosphoserine phosphatase protein; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 2777482..2778372 Rhizobium leguminosarum bv. trifolii WSM1325 8013741 YP_002976598.1 CDS Rleg_2798 NC_012850.1 2778707 2780473 R KEGG: rec:RHECIAT_CH0002938 serine protease Do protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do complement(2778707..2780473) Rhizobium leguminosarum bv. trifolii WSM1325 8013742 YP_002976599.1 CDS Rleg_2799 NC_012850.1 2780675 2781640 R KEGG: rec:RHECIAT_CH0002939 hydrolase serine protease transmembrane subunit C protein; TIGRFAM: HflC protein; PFAM: band 7 protein; SMART: band 7 protein; HflC protein complement(2780675..2781640) Rhizobium leguminosarum bv. trifolii WSM1325 8015723 YP_002976600.1 CDS Rleg_2800 NC_012850.1 2781644 2782726 R KEGG: rec:RHECIAT_CH0002940 hydrolase serine protease transmembrane subunit K protein; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein complement(2781644..2782726) Rhizobium leguminosarum bv. trifolii WSM1325 8013743 YP_002976601.1 CDS Rleg_2801 NC_012850.1 2782875 2783393 R PFAM: dihydrofolate reductase region; KEGG: rec:RHECIAT_CH0002941 dihydrofolate reductase protein; dihydrofolate reductase complement(2782875..2783393) Rhizobium leguminosarum bv. trifolii WSM1325 8013744 YP_002976602.1 CDS thyA NC_012850.1 2783407 2784201 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(2783407..2784201) Rhizobium leguminosarum bv. trifolii WSM1325 8015724 YP_002976603.1 CDS Rleg_2803 NC_012850.1 2784803 2785318 D PFAM: protein of unknown function DUF1321; KEGG: ret:RHE_CH02800 hypothetical protein; hypothetical protein 2784803..2785318 Rhizobium leguminosarum bv. trifolii WSM1325 8013745 YP_002976604.1 CDS Rleg_2804 NC_012850.1 2785369 2785563 D KEGG: ret:RHE_CH02801 hypothetical protein; hypothetical protein 2785369..2785563 Rhizobium leguminosarum bv. trifolii WSM1325 8015725 YP_002976605.1 CDS Rleg_2805 NC_012850.1 2785723 2785947 D KEGG: ret:RHE_CH02802 hypothetical protein; hypothetical protein 2785723..2785947 Rhizobium leguminosarum bv. trifolii WSM1325 8013746 YP_002976606.1 CDS Rleg_2806 NC_012850.1 2786040 2789756 R KEGG: rec:RHECIAT_CH0002947 hypothetical protein; hypothetical protein complement(2786040..2789756) Rhizobium leguminosarum bv. trifolii WSM1325 8013747 YP_002976607.1 CDS Rleg_2807 NC_012850.1 2789958 2791370 R PFAM: FAD linked oxidase domain protein; KEGG: rec:RHECIAT_CH0002948 D-lactate dehydrogenase (cytochrome) protein; D-lactate dehydrogenase complement(2789958..2791370) Rhizobium leguminosarum bv. trifolii WSM1325 8015726 YP_002976608.1 CDS Rleg_2808 NC_012850.1 2791533 2792567 R PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0002949 oxidoreductase protein; aldo/keto reductase complement(2791533..2792567) Rhizobium leguminosarum bv. trifolii WSM1325 8013748 YP_002976609.1 CDS Rleg_2809 NC_012850.1 2792660 2793562 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH02806 LysR family transcriptional regulator; LysR family transcriptional regulator 2792660..2793562 Rhizobium leguminosarum bv. trifolii WSM1325 8013749 YP_002976610.1 CDS Rleg_2810 NC_012850.1 2793810 2794904 D TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: rec:RHECIAT_CH0002951 ammonia monooxygenase protein; membrane protein AbrB 2793810..2794904 Rhizobium leguminosarum bv. trifolii WSM1325 8013750 YP_002976611.1 CDS Rleg_2811 NC_012850.1 2794864 2795775 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0002955 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator complement(2794864..2795775) Rhizobium leguminosarum bv. trifolii WSM1325 8013751 YP_002976612.1 CDS Rleg_2812 NC_012850.1 2795821 2796228 D KEGG: rec:RHECIAT_CH0002956 hypothetical protein; hypothetical protein 2795821..2796228 Rhizobium leguminosarum bv. trifolii WSM1325 8013752 YP_002976613.1 CDS Rleg_2813 NC_012850.1 2796278 2796943 R PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: ret:RHE_CH02810 outer membrane lipoprotein; OmpA/MotB domain-containing protein complement(2796278..2796943) Rhizobium leguminosarum bv. trifolii WSM1325 8013753 YP_002976614.1 CDS Rleg_2814 NC_012850.1 2797157 2798155 R PFAM: flagellin domain protein; KEGG: rec:RHECIAT_CH0002958 flagellin C protein; flagellin domain-containing protein complement(2797157..2798155) Rhizobium leguminosarum bv. trifolii WSM1325 8013754 YP_002976615.1 CDS Rleg_2815 NC_012850.1 2798428 2801583 R PFAM: acriflavin resistance protein; KEGG: ret:RHE_CH02812 acriflavin resistance efflux transporter; acriflavin resistance protein complement(2798428..2801583) Rhizobium leguminosarum bv. trifolii WSM1325 8013755 YP_002976616.1 CDS Rleg_2816 NC_012850.1 2801580 2802791 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH02813 HlyD family protein secretion protein; RND family efflux transporter MFP subunit complement(2801580..2802791) Rhizobium leguminosarum bv. trifolii WSM1325 8013756 YP_002976617.1 CDS Rleg_2817 NC_012850.1 2803059 2803979 R KEGG: rec:RHECIAT_CH0002961 adenylate cyclase protein; adenylate/guanylate cyclase complement(2803059..2803979) Rhizobium leguminosarum bv. trifolii WSM1325 8013757 YP_002976618.1 CDS Rleg_2818 NC_012850.1 2804136 2805686 R PFAM: SpoVR family protein; KEGG: rec:RHECIAT_CH0002964 sporulation like protein, SpoVR family; SpoVR family protein complement(2804136..2805686) Rhizobium leguminosarum bv. trifolii WSM1325 8013758 YP_002976619.1 CDS Rleg_2819 NC_012850.1 2805683 2806954 R PFAM: protein of unknown function DUF444; KEGG: rec:RHECIAT_CH0002965 hypothetical protein; hypothetical protein complement(2805683..2806954) Rhizobium leguminosarum bv. trifolii WSM1325 8013759 YP_002976620.1 CDS Rleg_2820 NC_012850.1 2806967 2808910 R PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: rec:RHECIAT_CH0002966 serine protein kinase protein; serine protein kinase PrkA complement(2806967..2808910) Rhizobium leguminosarum bv. trifolii WSM1325 8013760 YP_002976621.1 CDS Rleg_2821 NC_012850.1 2809342 2809818 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: ret:RHE_CH02818 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase complement(2809342..2809818) Rhizobium leguminosarum bv. trifolii WSM1325 8013761 YP_002976622.1 CDS Rleg_2822 NC_012850.1 2810066 2812546 D PFAM: UvrD/REP helicase; KEGG: rec:RHECIAT_CH0002969 ATP-dependent DNA helicase II protein; UvrD/REP helicase 2810066..2812546 Rhizobium leguminosarum bv. trifolii WSM1325 8013762 YP_002976623.1 CDS Rleg_2823 NC_012850.1 2812571 2812918 R KEGG: rec:RHECIAT_CH0002970 hypothetical protein; hypothetical protein complement(2812571..2812918) Rhizobium leguminosarum bv. trifolii WSM1325 8013763 YP_002976624.1 CDS Rleg_2824 NC_012850.1 2813321 2813818 D KEGG: casA; calcium-binding protein; hypothetical protein 2813321..2813818 Rhizobium leguminosarum bv. trifolii WSM1325 8015727 YP_002976625.1 CDS Rleg_2825 NC_012850.1 2814133 2814759 D PFAM: isochorismatase hydrolase; KEGG: ret:RHE_CH02821 pyrazinamidase/nicotinamidase protein; nicotinamidase 2814133..2814759 Rhizobium leguminosarum bv. trifolii WSM1325 8013764 YP_002976626.1 CDS Rleg_2826 NC_012850.1 2814859 2815524 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_CH0002973 probable riboflavin biosynthesis protein; bifunctional deaminase-reductase domain-containing protein 2814859..2815524 Rhizobium leguminosarum bv. trifolii WSM1325 8013765 YP_002976627.1 CDS Rleg_2828 NC_012850.1 2815722 2817248 R KEGG: ret:RHE_CH02823 hypothetical protein; hypothetical protein complement(2815722..2817248) Rhizobium leguminosarum bv. trifolii WSM1325 8013766 YP_002976628.1 CDS Rleg_2829 NC_012850.1 2817479 2817724 R KEGG: ret:RHE_CH02824 hypothetical protein; hypothetical protein complement(2817479..2817724) Rhizobium leguminosarum bv. trifolii WSM1325 8013767 YP_002976629.1 CDS Rleg_2830 NC_012850.1 2817857 2818588 D PFAM: AzlC family protein; KEGG: rec:RHECIAT_CH0002975 branched-chain amino acid permease (azaleucine resistance) protein; AzlC family protein 2817857..2818588 Rhizobium leguminosarum bv. trifolii WSM1325 8013768 YP_002976630.1 CDS Rleg_2831 NC_012850.1 2818592 2818900 D PFAM: branched-chain amino acid transport; KEGG: rec:RHECIAT_CH0002976 hypothetical conserved membrane protein; branched-chain amino acid transport 2818592..2818900 Rhizobium leguminosarum bv. trifolii WSM1325 8013769 YP_002976631.1 CDS Rleg_2832 NC_012850.1 2818970 2820856 R PFAM: peptidase M24; creatinase; KEGG: ret:RHE_CH02827 aminopeptidase P protein; Xaa-Pro aminopeptidase complement(2818970..2820856) Rhizobium leguminosarum bv. trifolii WSM1325 8013770 YP_002976632.1 CDS Rleg_2833 NC_012850.1 2821085 2821258 D hypothetical protein 2821085..2821258 Rhizobium leguminosarum bv. trifolii WSM1325 8013771 YP_002976633.1 CDS prmA NC_012850.1 2821676 2822554 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(2821676..2822554) Rhizobium leguminosarum bv. trifolii WSM1325 8013772 YP_002976634.1 CDS Rleg_2835 NC_012850.1 2822623 2823225 R PFAM: electron transport protein SCO1/SenC; KEGG: rec:RHECIAT_CH0002979 cytochrome C oxidase assembly factor protein; electron transport protein SCO1/SenC complement(2822623..2823225) Rhizobium leguminosarum bv. trifolii WSM1325 8013773 YP_002976635.1 CDS Rleg_2836 NC_012850.1 2823545 2824015 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rec:RHECIAT_CH0002981 chemotaxis signal transduction protein; CheW protein 2823545..2824015 Rhizobium leguminosarum bv. trifolii WSM1325 8013774 YP_002976636.1 CDS Rleg_2837 NC_012850.1 2824125 2824619 R PFAM: CreA family protein; KEGG: rec:RHECIAT_CH0002982 hypothetical conserved protein, CreA family; CreA family protein complement(2824125..2824619) Rhizobium leguminosarum bv. trifolii WSM1325 8013775 YP_002976637.1 CDS Rleg_2838 NC_012850.1 2824699 2825298 R PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: ret:RHE_CH02833 DNA polymerase III, epsilon subunit protein; exonuclease RNase T and DNA polymerase III complement(2824699..2825298) Rhizobium leguminosarum bv. trifolii WSM1325 8013776 YP_002976638.1 CDS Rleg_2839 NC_012850.1 2825574 2826110 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0002984 probable acetyltransferase protein; N-acetyltransferase GCN5 2825574..2826110 Rhizobium leguminosarum bv. trifolii WSM1325 8013777 YP_002976639.1 CDS ligA NC_012850.1 2826142 2828298 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(2826142..2828298) Rhizobium leguminosarum bv. trifolii WSM1325 8013778 YP_002976640.1 CDS Rleg_2841 NC_012850.1 2828606 2829133 R KEGG: ret:RHE_CH02836 hypothetical protein; hypothetical protein complement(2828606..2829133) Rhizobium leguminosarum bv. trifolii WSM1325 8013779 YP_002976641.1 CDS Rleg_2842 NC_012850.1 2829233 2830906 R TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rec:RHECIAT_CH0002987 DNA repair protein; DNA repair protein RecN complement(2829233..2830906) Rhizobium leguminosarum bv. trifolii WSM1325 8013780 YP_002976642.1 CDS Rleg_2843 NC_012850.1 2830912 2831757 R TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: ret:RHE_CH02838 hypothetical protein; outer membrane assembly lipoprotein YfiO complement(2830912..2831757) Rhizobium leguminosarum bv. trifolii WSM1325 8013781 YP_002976643.1 CDS lpxC NC_012850.1 2832039 2832995 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(2832039..2832995) Rhizobium leguminosarum bv. trifolii WSM1325 8015729 YP_002976644.1 CDS Rleg_2845 NC_012850.1 2833259 2834977 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2833259..2834977) Rhizobium leguminosarum bv. trifolii WSM1325 8013782 YP_002976645.1 CDS Rleg_2846 NC_012850.1 2835033 2836364 R TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: rec:RHECIAT_CH0002992 cell division protein; cell division protein FtsA complement(2835033..2836364) Rhizobium leguminosarum bv. trifolii WSM1325 8013783 YP_002976646.1 CDS Rleg_2847 NC_012850.1 2836361 2837293 R PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: ret:RHE_CH02842 cell division protein; cell division protein FtsQ complement(2836361..2837293) Rhizobium leguminosarum bv. trifolii WSM1325 8013784 YP_002976647.1 CDS ddl NC_012850.1 2837281 2838207 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(2837281..2838207) Rhizobium leguminosarum bv. trifolii WSM1325 8013785 YP_002976648.1 CDS Rleg_2849 NC_012850.1 2838481 2839167 R porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z complement(2838481..2839167) Rhizobium leguminosarum bv. trifolii WSM1325 8013786 YP_002976649.1 CDS Rleg_2850 NC_012850.1 2839437 2840750 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: ABC transporter; SNP /replace=A; general substrate transporter 2839437..2840750 Rhizobium leguminosarum bv. trifolii WSM1325 8013787 YP_002976650.1 CDS Rleg_2851 NC_012850.1 2840865 2841794 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0002995 UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase 2840865..2841794 Rhizobium leguminosarum bv. trifolii WSM1325 8013788 YP_002976651.1 CDS murB NC_012850.1 2841798 2842772 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(2841798..2842772) Rhizobium leguminosarum bv. trifolii WSM1325 8015730 YP_002976652.1 CDS murC NC_012850.1 2842769 2844184 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(2842769..2844184) Rhizobium leguminosarum bv. trifolii WSM1325 8013789 YP_002976653.1 CDS murG NC_012850.1 2844181 2845305 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase complement(2844181..2845305) Rhizobium leguminosarum bv. trifolii WSM1325 8013790 YP_002976654.1 CDS Rleg_2855 NC_012850.1 2845312 2846466 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rec:RHECIAT_CH0002999 cell division protein; cell division protein FtsW complement(2845312..2846466) Rhizobium leguminosarum bv. trifolii WSM1325 8013791 YP_002976655.1 CDS murD NC_012850.1 2846468 2847880 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(2846468..2847880) Rhizobium leguminosarum bv. trifolii WSM1325 8013792 YP_002976656.1 CDS mraY NC_012850.1 2847888 2848988 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2847888..2848988) Rhizobium leguminosarum bv. trifolii WSM1325 8013793 YP_002976657.1 CDS Rleg_2858 NC_012850.1 2849011 2850444 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: ret:RHE_CH02851 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D -alanyl-D-alanine synthetase protein; SNP /replace=C; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(2849011..2850444) Rhizobium leguminosarum bv. trifolii WSM1325 8013794 YP_002976658.1 CDS murE NC_012850.1 2850441 2851901 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(2850441..2851901) Rhizobium leguminosarum bv. trifolii WSM1325 8013795 YP_002976659.1 CDS Rleg_2860 NC_012850.1 2851968 2853728 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rec:RHECIAT_CH0003004 cell division penicillin-binding protein; peptidoglycan glycosyltransferase complement(2851968..2853728) Rhizobium leguminosarum bv. trifolii WSM1325 8013796 YP_002976660.1 CDS Rleg_2861 NC_012850.1 2853728 2854228 R KEGG: rec:RHECIAT_CH0003005 hypothetical protein; hypothetical protein complement(2853728..2854228) Rhizobium leguminosarum bv. trifolii WSM1325 8013797 YP_002976661.1 CDS mraW NC_012850.1 2854230 2855255 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rec:RHECIAT_CH0003006 S-adenosyl-methyltransferase protein; S-adenosyl-methyltransferase MraW complement(2854230..2855255) Rhizobium leguminosarum bv. trifolii WSM1325 8013798 YP_002976662.1 CDS Rleg_2863 NC_012850.1 2855273 2855800 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(2855273..2855800) Rhizobium leguminosarum bv. trifolii WSM1325 8013799 YP_002976663.1 CDS Rleg_2864 NC_012850.1 2856692 2857867 R PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_CH0003008 probable sarcosine oxidase protein; FAD dependent oxidoreductase complement(2856692..2857867) Rhizobium leguminosarum bv. trifolii WSM1325 8013801 YP_002976664.1 CDS Rleg_2865 NC_012850.1 2857971 2859164 R PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_CH02858 sarcosine oxidase protein; FAD dependent oxidoreductase complement(2857971..2859164) Rhizobium leguminosarum bv. trifolii WSM1325 8013802 YP_002976665.1 CDS Rleg_2866 NC_012850.1 2859244 2859864 R PFAM: Lytic transglycosylase catalytic; KEGG: rec:RHECIAT_CH0003010 probable transglycosylase protein; lytic transglycosylase complement(2859244..2859864) Rhizobium leguminosarum bv. trifolii WSM1325 8013803 YP_002976666.1 CDS Rleg_2867 NC_012850.1 2860127 2860888 R KEGG: ret:RHE_CH02860 N-acetylmuramoyl-L-alanine amidase protein; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(2860127..2860888) Rhizobium leguminosarum bv. trifolii WSM1325 8013804 YP_002976667.1 CDS Rleg_2868 NC_012850.1 2860885 2861592 R PFAM: protein of unknown function DUF1332; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: rec:RHECIAT_CH0003012 molecular chaperone protein, DnaJ family; SNP /replace=G; hypothetical protein complement(2860885..2861592) Rhizobium leguminosarum bv. trifolii WSM1325 8013805 YP_002976668.1 CDS Rleg_2869 NC_012850.1 2862003 2863214 D catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; pyrophosphate--fructose-6-phosphate 1-phosphotransferase 2862003..2863214 Rhizobium leguminosarum bv. trifolii WSM1325 8013806 YP_002976669.1 CDS Rleg_2870 NC_012850.1 2863272 2863907 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0003015 probable amino acid efflux protein, LysE family; lysine exporter protein LysE/YggA 2863272..2863907 Rhizobium leguminosarum bv. trifolii WSM1325 8013807 YP_002976670.1 CDS Rleg_2871 NC_012850.1 2864023 2864940 D PFAM: Lytic transglycosylase catalytic; KEGG: ret:RHE_CH02864 transglycosylase protein; lytic transglycosylase 2864023..2864940 Rhizobium leguminosarum bv. trifolii WSM1325 8013808 YP_002976671.1 CDS Rleg_2872 NC_012850.1 2865006 2866433 R PFAM: beta-lactamase; KEGG: rec:RHECIAT_CH0003017 6-aminohexanoate-dimer hydrolase protein; beta-lactamase complement(2865006..2866433) Rhizobium leguminosarum bv. trifolii WSM1325 8013809 YP_002976672.1 CDS Rleg_2873 NC_012850.1 2866653 2867897 D KEGG: rec:RHECIAT_CH0003018 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase protein; S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyltransferase 2866653..2867897 Rhizobium leguminosarum bv. trifolii WSM1325 8013810 YP_002976673.1 CDS Rleg_2874 NC_012850.1 2867894 2868568 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rec:RHECIAT_CH0003019 S-adenosylmethionine:diacylgycerolhomoserine-N- methyltransferase protein; type 11 methyltransferase 2867894..2868568 Rhizobium leguminosarum bv. trifolii WSM1325 8013811 YP_002976674.1 CDS Rleg_2875 NC_012850.1 2868694 2869491 D PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: ret:RHE_CH02868 glycoside hydrolase protein; glycoside hydrolase 2868694..2869491 Rhizobium leguminosarum bv. trifolii WSM1325 8013812 YP_002976675.1 CDS Rleg_2876 NC_012850.1 2869574 2870791 D TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding domain 1 protein; KEGG: rec:RHECIAT_CH0003021 probable membrane-bound lytic murein transglycosylase protein; lytic murein transglycosylase 2869574..2870791 Rhizobium leguminosarum bv. trifolii WSM1325 8015731 YP_002976676.1 CDS Rleg_2877 NC_012850.1 2870896 2871801 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH02870 permease protein; hypothetical protein 2870896..2871801 Rhizobium leguminosarum bv. trifolii WSM1325 8013813 YP_002976677.1 CDS Rleg_2878 NC_012850.1 2872248 2873189 R KEGG: rec:RHECIAT_CH0003023 5,10-methylenetetrahydrofolate reductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(2872248..2873189) Rhizobium leguminosarum bv. trifolii WSM1325 8013814 YP_002976678.1 CDS Rleg_2879 NC_012850.1 2873191 2874216 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; regulatory protein ArsR; methyltransferase type 12; SMART: regulatory protein ArsR; KEGG: rec:RHECIAT_CH0003024 probable methyltransferase transcriptional regulator protein, ArsR family; ArsR family transcriptional regulator complement(2873191..2874216) Rhizobium leguminosarum bv. trifolii WSM1325 8015732 YP_002976679.1 CDS Rleg_2880 NC_012850.1 2874379 2876028 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein complement(2874379..2876028) Rhizobium leguminosarum bv. trifolii WSM1325 8013815 YP_002976680.1 CDS Rleg_2881 NC_012850.1 2876127 2876867 R PFAM: ribonuclease T2; KEGG: rec:RHECIAT_CH0003026 probable enterobacter ribonuclease protein; ribonuclease T2 complement(2876127..2876867) Rhizobium leguminosarum bv. trifolii WSM1325 8013816 YP_002976681.1 CDS Rleg_2882 NC_012850.1 2877026 2877955 D PFAM: alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0003027 lysophospholipase protein; alpha/beta hydrolase 2877026..2877955 Rhizobium leguminosarum bv. trifolii WSM1325 8013817 YP_002976682.1 CDS Rleg_2883 NC_012850.1 2877989 2878945 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0003028 transporter, permease protein; hypothetical protein 2877989..2878945 Rhizobium leguminosarum bv. trifolii WSM1325 8013818 YP_002976683.1 CDS Rleg_2884 NC_012850.1 2878964 2880166 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rec:RHECIAT_CH0003029 acyl-CoA transferase/L-carnitine dehydrogenase protein; L-carnitine dehydratase/bile acid-inducible protein F 2878964..2880166 Rhizobium leguminosarum bv. trifolii WSM1325 8013819 YP_002976684.1 CDS Rleg_2885 NC_012850.1 2880180 2881838 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ret:RHE_CH02878 acetolactate synthase 2 catalytic subunit; thiamine pyrophosphate protein 2880180..2881838 Rhizobium leguminosarum bv. trifolii WSM1325 8013820 YP_002976685.1 CDS Rleg_2886 NC_012850.1 2881884 2882228 R PFAM: endoribonuclease L-PSP; KEGG: rec:RHECIAT_CH0003031 translation initiation inhibitor protein; endoribonuclease L-PSP complement(2881884..2882228) Rhizobium leguminosarum bv. trifolii WSM1325 8013821 YP_002976686.1 CDS Rleg_2887 NC_012850.1 2882302 2882640 R PFAM: protein of unknown function DUF442; KEGG: ret:RHE_CH02880 hypothetical protein; hypothetical protein complement(2882302..2882640) Rhizobium leguminosarum bv. trifolii WSM1325 8013822 YP_002976687.1 CDS Rleg_2888 NC_012850.1 2882712 2883551 R KEGG: rec:RHECIAT_CH0003033 hypothetical protein; hypothetical protein complement(2882712..2883551) Rhizobium leguminosarum bv. trifolii WSM1325 8015733 YP_002976688.1 CDS Rleg_2889 NC_012850.1 2883914 2885314 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_CH02882 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2883914..2885314 Rhizobium leguminosarum bv. trifolii WSM1325 8013823 YP_002976689.1 CDS Rleg_2890 NC_012850.1 2885390 2886103 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ret:RHE_CH02883 chromosome partitioning protein A; Cobyrinic acid ac-diamide synthase complement(2885390..2886103) Rhizobium leguminosarum bv. trifolii WSM1325 8013824 YP_002976690.1 CDS Rleg_2891 NC_012850.1 2886333 2887484 R PFAM: iron-containing alcohol dehydrogenase; KEGG: ret:RHE_CH02884 alcohol dehydrogenase protein; iron-containing alcohol dehydrogenase complement(2886333..2887484) Rhizobium leguminosarum bv. trifolii WSM1325 8015734 YP_002976691.1 CDS Rleg_2892 NC_012850.1 2887481 2888866 R PFAM: aldehyde Dehydrogenase; KEGG: ret:RHE_CH02885 aldehyde dehydrogenase; aldehyde Dehydrogenase complement(2887481..2888866) Rhizobium leguminosarum bv. trifolii WSM1325 8013825 YP_002976692.1 CDS Rleg_2893 NC_012850.1 2889110 2890477 R PFAM: glutamine synthetase catalytic region; KEGG: rec:RHECIAT_CH0003038 glutamine synthetase protein; glutamate--ammonia ligase complement(2889110..2890477) Rhizobium leguminosarum bv. trifolii WSM1325 8013826 YP_002976693.1 CDS Rleg_2894 NC_012850.1 2890625 2892256 R PFAM: amino acid permease-associated region; KEGG: rec:RHECIAT_CH0003039 amino acid permease protein; amino acid permease complement(2890625..2892256) Rhizobium leguminosarum bv. trifolii WSM1325 8013827 YP_002976694.1 CDS Rleg_2895 NC_012850.1 2892302 2893072 R PFAM: N-formylglutamate amidohydrolase; KEGG: ret:RHE_CH02888 N-formylglutamate amidohydrolase protein; N-formylglutamate amidohydrolase complement(2892302..2893072) Rhizobium leguminosarum bv. trifolii WSM1325 8013828 YP_002976695.1 CDS Rleg_2896 NC_012850.1 2893252 2894124 D PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: ret:RHE_CH02889 RpiR family transcriptional regulator; RpiR family transcriptional regulator 2893252..2894124 Rhizobium leguminosarum bv. trifolii WSM1325 8013829 YP_002976696.1 CDS Rleg_2897 NC_012850.1 2894316 2895419 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0003042 probable ABC transporter, substrate-binding protein; extracellular solute-binding protein 2894316..2895419 Rhizobium leguminosarum bv. trifolii WSM1325 8013830 YP_002976697.1 CDS Rleg_2898 NC_012850.1 2895491 2896384 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02891 ABC transporter permease; ABC transporter permease 2895491..2896384 Rhizobium leguminosarum bv. trifolii WSM1325 8015735 YP_002976698.1 CDS Rleg_2899 NC_012850.1 2896381 2897169 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003044 probable ABC transporter, permease protein; ABC transporter permease 2896381..2897169 Rhizobium leguminosarum bv. trifolii WSM1325 8013831 YP_002976699.1 CDS Rleg_2900 NC_012850.1 2897182 2898243 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003045 probable ABC transporter, ATP-binding protein; ABC transporter 2897182..2898243 Rhizobium leguminosarum bv. trifolii WSM1325 8013832 YP_002976700.1 CDS Rleg_2901 NC_012850.1 2898439 2898744 D PFAM: NIPSNAP family containing protein; KEGG: mlo:mlr4215 hypothetical protein; NIPSNAP family containing protein 2898439..2898744 Rhizobium leguminosarum bv. trifolii WSM1325 8013833 YP_002976701.1 CDS Rleg_2902 NC_012850.1 2898818 2899819 R PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_CH02894 sugar ABC transporter, ATP-binding protein; ABC transporter complement(2898818..2899819) Rhizobium leguminosarum bv. trifolii WSM1325 8013834 YP_002976702.1 CDS Rleg_2903 NC_012850.1 2899830 2900888 R PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0003047 probable oxidoreductase protein; oxidoreductase domain-containing protein complement(2899830..2900888) Rhizobium leguminosarum bv. trifolii WSM1325 8013835 YP_002976703.1 CDS Rleg_2904 NC_012850.1 2900885 2901724 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003048 probable sugar ABC transporter, permease protein; ABC transporter permease complement(2900885..2901724) Rhizobium leguminosarum bv. trifolii WSM1325 8015736 YP_002976704.1 CDS Rleg_2905 NC_012850.1 2901734 2902681 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003049 probable sugar ABC transporter, permease protein; ABC transporter permease complement(2901734..2902681) Rhizobium leguminosarum bv. trifolii WSM1325 8015737 YP_002976705.1 CDS Rleg_2906 NC_012850.1 2902898 2904157 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH02898 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(2902898..2904157) Rhizobium leguminosarum bv. trifolii WSM1325 8013836 YP_002976706.1 CDS Rleg_2907 NC_012850.1 2904680 2905564 D PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: rec:RHECIAT_CH0003052 N-acetylglucosamine kinase protein; BadF/BadG/BcrA/BcrD type ATPase 2904680..2905564 Rhizobium leguminosarum bv. trifolii WSM1325 8015738 YP_002976707.1 CDS Rleg_2908 NC_012850.1 2905561 2906325 D PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0003053 probable transcriptional regulator protein; GntR family transcriptional regulator 2905561..2906325 Rhizobium leguminosarum bv. trifolii WSM1325 8013837 YP_002976708.1 CDS Rleg_2909 NC_012850.1 2906329 2906730 R PFAM: PilT protein domain protein; KEGG: tmz:Tmz1t_0047 PilT protein domain protein; PilT protein domain-containing protein complement(2906329..2906730) Rhizobium leguminosarum bv. trifolii WSM1325 8013838 YP_002976709.1 CDS Rleg_2910 NC_012850.1 2906727 2906960 R TIGRFAM: prevent-host-death family protein; KEGG: rec:RHECIAT_CH0003055 hypothetical protein; prevent-host-death family protein complement(2906727..2906960) Rhizobium leguminosarum bv. trifolii WSM1325 8013839 YP_002976710.1 CDS metH NC_012850.1 2907156 2910929 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(2907156..2910929) Rhizobium leguminosarum bv. trifolii WSM1325 8013840 YP_002976711.1 CDS Rleg_2912 NC_012850.1 2911202 2912461 D PFAM: N-acylglucosamine 2-epimerase; KEGG: rec:RHECIAT_CH0003057 N-acylglucosamine 2-epimerase protein; N-acylglucosamine 2-epimerase 2911202..2912461 Rhizobium leguminosarum bv. trifolii WSM1325 8013841 YP_002976712.1 CDS Rleg_2913 NC_012850.1 2912471 2913094 R KEGG: cak:Caul_0754 hypothetical protein; hypothetical protein complement(2912471..2913094) Rhizobium leguminosarum bv. trifolii WSM1325 8013842 YP_002976713.1 CDS Rleg_2914 NC_012850.1 2913227 2913724 R PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02903 hypothetical protein; hypothetical protein complement(2913227..2913724) Rhizobium leguminosarum bv. trifolii WSM1325 8013843 YP_002976714.1 CDS Rleg_2915 NC_012850.1 2913915 2914526 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rec:RHECIAT_CH0003059 flavin reductase protein; flavin reductase domain-containing FMN-binding protein complement(2913915..2914526) Rhizobium leguminosarum bv. trifolii WSM1325 8013844 YP_002976715.1 CDS Rleg_2916 NC_012850.1 2914530 2915273 R PFAM: Asp/Glu/hydantoin racemase; KEGG: rec:RHECIAT_CH0003060 probable hydantoin racemase protein; Asp/Glu/hydantoin racemase complement(2914530..2915273) Rhizobium leguminosarum bv. trifolii WSM1325 8015739 YP_002976716.1 CDS Rleg_2917 NC_012850.1 2915275 2916096 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003061 probable spermidine/putrescine ABC transporter, permease protein; ABC transporter permease complement(2915275..2916096) Rhizobium leguminosarum bv. trifolii WSM1325 8015740 YP_002976717.1 CDS Rleg_2918 NC_012850.1 2916098 2917012 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02907 spermidine/putrescine ABC transporter permease; ABC transporter permease complement(2916098..2917012) Rhizobium leguminosarum bv. trifolii WSM1325 8013845 YP_002976718.1 CDS Rleg_2919 NC_012850.1 2917322 2918620 R KEGG: rec:RHECIAT_CH0003063 probable spermidine/putrescine ABC transporter, substrate-binding protein; spermidine/putrescine ABC transporter substrate-binding protein complement(2917322..2918620) Rhizobium leguminosarum bv. trifolii WSM1325 8013846 YP_002976719.1 CDS Rleg_2920 NC_012850.1 2918673 2919764 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003064 probable spermidine/putrescine ABC transporter, ATP-binding protein; ABC transporter complement(2918673..2919764) Rhizobium leguminosarum bv. trifolii WSM1325 8013847 YP_002976720.1 CDS Rleg_2921 NC_012850.1 2920028 2920738 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0003065 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator 2920028..2920738 Rhizobium leguminosarum bv. trifolii WSM1325 8013848 YP_002976721.1 CDS Rleg_2922 NC_012850.1 2920801 2921316 R KEGG: rec:RHECIAT_CH0000809 hypothetical protein; hypothetical protein complement(2920801..2921316) Rhizobium leguminosarum bv. trifolii WSM1325 8013849 YP_002976722.1 CDS Rleg_2923 NC_012850.1 2921336 2921719 R KEGG: ret:RHE_CH02912 hypothetical protein; SNP /replace=C; hypothetical protein complement(2921336..2921719) Rhizobium leguminosarum bv. trifolii WSM1325 8013850 YP_002976723.1 CDS Rleg_2924 NC_012850.1 2922082 2922288 D KEGG: rec:RHECIAT_CH0003068 hypothetical protein; hypothetical protein 2922082..2922288 Rhizobium leguminosarum bv. trifolii WSM1325 8013851 YP_002976724.1 CDS Rleg_2925 NC_012850.1 2922314 2922553 D KEGG: ret:RHE_CH02913 hypothetical protein; hypothetical protein 2922314..2922553 Rhizobium leguminosarum bv. trifolii WSM1325 8013852 YP_002976725.1 CDS Rleg_2926 NC_012850.1 2922673 2924598 R KEGG: hypothetical protein; hypothetical protein complement(2922673..2924598) Rhizobium leguminosarum bv. trifolii WSM1325 8013853 YP_002976726.1 CDS Rleg_2927 NC_012850.1 2924928 2925122 R hypothetical protein complement(2924928..2925122) Rhizobium leguminosarum bv. trifolii WSM1325 8013854 YP_002976727.1 CDS Rleg_2928 NC_012850.1 2925246 2925971 D PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ret:RHE_CH02915 autoinducer transcriptional regulator protein; LuxR family transcriptional regulator 2925246..2925971 Rhizobium leguminosarum bv. trifolii WSM1325 8013855 YP_002976728.1 CDS Rleg_2929 NC_012850.1 2926110 2926775 D PFAM: autoinducer synthesis protein; KEGG: rec:RHECIAT_CH0003073 autoinducer synthesis protein; autoinducer synthesis protein 2926110..2926775 Rhizobium leguminosarum bv. trifolii WSM1325 8013856 YP_002976729.1 CDS Rleg_2930 NC_012850.1 2926772 2926975 D KEGG: rec:RHECIAT_CH0003074 hypothetical protein; hypothetical protein 2926772..2926975 Rhizobium leguminosarum bv. trifolii WSM1325 8015741 YP_002976730.1 CDS Rleg_2931 NC_012850.1 2927095 2927463 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0003075 probable two-component response regulator protein; response regulator receiver protein complement(2927095..2927463) Rhizobium leguminosarum bv. trifolii WSM1325 8013857 YP_002976731.1 CDS Rleg_2932 NC_012850.1 2927799 2928536 R KEGG: bac:BamMC406_6706 hypothetical protein; hypothetical protein complement(2927799..2928536) Rhizobium leguminosarum bv. trifolii WSM1325 8015742 YP_002976732.1 CDS Rleg_2933 NC_012850.1 2929214 2929408 D hypothetical protein 2929214..2929408 Rhizobium leguminosarum bv. trifolii WSM1325 8013859 YP_002976733.1 CDS Rleg_2934 NC_012850.1 2929510 2929701 R KEGG: rec:RHECIAT_CH0001888 hypothetical protein; hypothetical protein complement(2929510..2929701) Rhizobium leguminosarum bv. trifolii WSM1325 8013860 YP_002976734.1 CDS Rleg_2935 NC_012850.1 2929956 2930102 D hypothetical protein 2929956..2930102 Rhizobium leguminosarum bv. trifolii WSM1325 8013861 YP_002976735.1 CDS Rleg_2937 NC_012850.1 2930848 2931588 D PFAM: protein of unknown function DUF541; KEGG: ret:RHE_CH02935 hypothetical protein; hypothetical protein 2930848..2931588 Rhizobium leguminosarum bv. trifolii WSM1325 8013863 YP_002976736.1 CDS Rleg_2938 NC_012850.1 2932091 2932606 R KEGG: rec:RHECIAT_CH0003102 hypothetical protein; hypothetical protein complement(2932091..2932606) Rhizobium leguminosarum bv. trifolii WSM1325 8013864 YP_002976737.1 CDS Rleg_2939 NC_012850.1 2932628 2932933 R KEGG: ret:RHE_CH02937 hypothetical protein; hypothetical protein complement(2932628..2932933) Rhizobium leguminosarum bv. trifolii WSM1325 8013865 YP_002976738.1 CDS Rleg_2940 NC_012850.1 2933056 2933478 R PFAM: protein of unknown function UPF0047; KEGG: ret:RHE_CH02938 hypothetical protein; hypothetical protein complement(2933056..2933478) Rhizobium leguminosarum bv. trifolii WSM1325 8013866 YP_002976739.1 CDS Rleg_2941 NC_012850.1 2933613 2933966 R PFAM: protein of unknown function DUF1428; KEGG: sme:SMc01560 hypothetical protein; hypothetical protein complement(2933613..2933966) Rhizobium leguminosarum bv. trifolii WSM1325 8013867 YP_002976740.1 CDS Rleg_2942 NC_012850.1 2934083 2934754 R PFAM: protein of unknown function DUF922; KEGG: rec:RHECIAT_CH0003105 hypothetical protein; hypothetical protein complement(2934083..2934754) Rhizobium leguminosarum bv. trifolii WSM1325 8013868 YP_002976741.1 CDS Rleg_2943 NC_012850.1 2934758 2935978 R PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: permease protein; major facilitator superfamily protein complement(2934758..2935978) Rhizobium leguminosarum bv. trifolii WSM1325 8013869 YP_002976742.1 CDS Rleg_2944 NC_012850.1 2936116 2936856 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: ret:RHE_CH02940 Crp/Fnr family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(2936116..2936856) Rhizobium leguminosarum bv. trifolii WSM1325 8013870 YP_002976743.1 CDS Rleg_2945 NC_012850.1 2936969 2937214 D KEGG: ret:RHE_CH02941 hypothetical protein; hypothetical protein 2936969..2937214 Rhizobium leguminosarum bv. trifolii WSM1325 8013871 YP_002976744.1 CDS Rleg_2946 NC_012850.1 2937384 2937617 R hypothetical protein complement(2937384..2937617) Rhizobium leguminosarum bv. trifolii WSM1325 8013872 YP_002976745.1 CDS Rleg_2947 NC_012850.1 2937698 2938096 R PFAM: protein of unknown function DUF427; KEGG: rec:RHECIAT_CH0003107 hypothetical protein; hypothetical protein complement(2937698..2938096) Rhizobium leguminosarum bv. trifolii WSM1325 8013873 YP_002976746.1 CDS Rleg_2948 NC_012850.1 2938196 2938888 R PFAM: B3/4 domain protein; KEGG: rec:RHECIAT_CH0003108 hypothetical protein; B3/4 domain-containing protein complement(2938196..2938888) Rhizobium leguminosarum bv. trifolii WSM1325 8013874 YP_002976747.1 CDS Rleg_2949 NC_012850.1 2938892 2939788 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0003109 permease protein; hypothetical protein complement(2938892..2939788) Rhizobium leguminosarum bv. trifolii WSM1325 8013875 YP_002976748.1 CDS Rleg_2950 NC_012850.1 2939872 2940678 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH02946 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2939872..2940678) Rhizobium leguminosarum bv. trifolii WSM1325 8013876 YP_002976749.1 CDS Rleg_2951 NC_012850.1 2940758 2941555 R PFAM: aminoglycoside phosphotransferase; KEGG: ret:RHE_CH02947 aminoglycoside 3'-phosphotransferase protein; aminoglycoside phosphotransferase complement(2940758..2941555) Rhizobium leguminosarum bv. trifolii WSM1325 8013877 YP_002976750.1 CDS Rleg_2952 NC_012850.1 2941658 2941819 R KEGG: rec:RHECIAT_CH0003112 hypothetical protein; hypothetical protein complement(2941658..2941819) Rhizobium leguminosarum bv. trifolii WSM1325 8013878 YP_002976751.1 CDS Rleg_2953 NC_012850.1 2941926 2942993 R PFAM: protein of unknown function DUF930; KEGG: rec:RHECIAT_CH0003113 hypothetical protein; hypothetical protein complement(2941926..2942993) Rhizobium leguminosarum bv. trifolii WSM1325 8015743 YP_002976752.1 CDS Rleg_2954 NC_012850.1 2943071 2943808 R PFAM: protein of unknown function DUF930; KEGG: mlo:mlr0330 hypothetical protein; hypothetical protein complement(2943071..2943808) Rhizobium leguminosarum bv. trifolii WSM1325 8013879 YP_002976753.1 CDS Rleg_2955 NC_012850.1 2943984 2944277 R PFAM: GYD family protein; KEGG: rec:RHECIAT_CH0003114 hypothetical protein; GYD family protein complement(2943984..2944277) Rhizobium leguminosarum bv. trifolii WSM1325 8013880 YP_002976754.1 CDS Rleg_2956 NC_012850.1 2944600 2946657 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(2944600..2946657) Rhizobium leguminosarum bv. trifolii WSM1325 8013881 YP_002976755.1 CDS Rleg_2957 NC_012850.1 2947125 2947472 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rec:RHECIAT_CH0003116 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(2947125..2947472) Rhizobium leguminosarum bv. trifolii WSM1325 8013882 YP_002976756.1 CDS tdh NC_012850.1 2947482 2948519 R converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase complement(2947482..2948519) Rhizobium leguminosarum bv. trifolii WSM1325 8015744 YP_002976757.1 CDS Rleg_2959 NC_012850.1 2948630 2949817 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(2948630..2949817) Rhizobium leguminosarum bv. trifolii WSM1325 8013883 YP_002976758.1 CDS Rleg_2960 NC_012850.1 2949983 2950711 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sme:SMc01426 hypothetical protein; type 11 methyltransferase complement(2949983..2950711) Rhizobium leguminosarum bv. trifolii WSM1325 8013884 YP_002976759.1 CDS Rleg_2961 NC_012850.1 2950783 2952651 R KEGG: rec:RHECIAT_CH0003119 ATP-dependent DNA helicase protein; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase; HRDC domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ complement(2950783..2952651) Rhizobium leguminosarum bv. trifolii WSM1325 8013885 YP_002976760.1 CDS dnaG NC_012850.1 2952651 2954660 R synthesizes RNA primers at the replication forks; DNA primase complement(2952651..2954660) Rhizobium leguminosarum bv. trifolii WSM1325 8013886 YP_002976761.1 CDS Rleg_2963 NC_012850.1 2955331 2956221 D KEGG: ret:RHE_CH02955 hypothetical protein; hypothetical protein 2955331..2956221 Rhizobium leguminosarum bv. trifolii WSM1325 8013887 YP_002976762.1 CDS Rleg_2964 NC_012850.1 2956225 2956680 R KEGG: ret:RHE_CH02956 hypothetical protein; hypothetical protein complement(2956225..2956680) Rhizobium leguminosarum bv. trifolii WSM1325 8013888 YP_002976763.1 CDS Rleg_2965 NC_012850.1 2956944 2958155 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2956944..2958155 Rhizobium leguminosarum bv. trifolii WSM1325 8015745 YP_002976764.1 CDS Rleg_2966 NC_012850.1 2958429 2958749 D KEGG: ret:RHE_CH02961 hypothetical protein; hypothetical protein 2958429..2958749 Rhizobium leguminosarum bv. trifolii WSM1325 8013889 YP_002976765.1 CDS Rleg_2967 NC_012850.1 2958767 2960170 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rec:RHECIAT_CH0003128 probable multidrug efflux protein; MATE efflux family protein complement(2958767..2960170) Rhizobium leguminosarum bv. trifolii WSM1325 8013890 YP_002976766.1 CDS Rleg_2968 NC_012850.1 2960313 2961557 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: ret:RHE_CH02963 transporter, permease protein; major facilitator superfamily protein complement(2960313..2961557) Rhizobium leguminosarum bv. trifolii WSM1325 8013891 YP_002976767.1 CDS Rleg_2969 NC_012850.1 2961957 2962952 D PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0003130 oxidoreductase protein; aldo/keto reductase 2961957..2962952 Rhizobium leguminosarum bv. trifolii WSM1325 8013892 YP_002976768.1 CDS Rleg_2970 NC_012850.1 2963010 2963930 R PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: ret:RHE_CH02964 zinc protease protein; hypothetical protein complement(2963010..2963930) Rhizobium leguminosarum bv. trifolii WSM1325 8015746 YP_002976769.1 CDS Rleg_2971 NC_012850.1 2964007 2964498 R KEGG: hypothetical protein; hypothetical protein complement(2964007..2964498) Rhizobium leguminosarum bv. trifolii WSM1325 8013893 YP_002976770.1 CDS Rleg_2972 NC_012850.1 2964585 2965361 D PFAM: LytTr DNA-binding region; KEGG: hypothetical protein; response regulator receiver protein 2964585..2965361 Rhizobium leguminosarum bv. trifolii WSM1325 8013894 YP_002976771.1 CDS carb NC_012850.1 2965631 2969119 D four carb-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; carb is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 2965631..2969119 Rhizobium leguminosarum bv. trifolii WSM1325 8013895 YP_002976772.1 CDS Rleg_2974 NC_012850.1 2969196 2970650 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rec:RHECIAT_CH0003134 uracil DNA glycosylase protein; phage SPO1 DNA polymerase-related protein complement(2969196..2970650) Rhizobium leguminosarum bv. trifolii WSM1325 8013896 YP_002976773.1 CDS Rleg_2975 NC_012850.1 2970650 2971894 R PFAM: Radical SAM domain protein; KEGG: rec:RHECIAT_CH0003135 hypothetical protein; radical SAM protein complement(2970650..2971894) Rhizobium leguminosarum bv. trifolii WSM1325 8015747 YP_002976774.1 CDS greA NC_012850.1 2972136 2972612 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 2972136..2972612 Rhizobium leguminosarum bv. trifolii WSM1325 8013897 YP_002976775.1 CDS Rleg_2977 NC_012850.1 2972640 2973698 D PFAM: glycosyl transferase group 1; KEGG: rec:RHECIAT_CH0003137 lipopolysaccharide core biosynthesis mannosyltransferase protein; group 1 glycosyl transferase 2972640..2973698 Rhizobium leguminosarum bv. trifolii WSM1325 8015748 YP_002976776.1 CDS Rleg_2978 NC_012850.1 2973772 2975106 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(2973772..2975106) Rhizobium leguminosarum bv. trifolii WSM1325 8013898 YP_002976777.1 CDS Rleg_2979 NC_012850.1 2975331 2977199 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH02972 two-component sensor histidine kinase protein regulating C4-dicarboxylate transport system; histidine kinase 2975331..2977199 Rhizobium leguminosarum bv. trifolii WSM1325 8013899 YP_002976778.1 CDS Rleg_2980 NC_012850.1 2977204 2978550 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: ret:RHE_CH02973 two-component response regulator protein regulating C4-dicarboxylate transport system; two component Fis family sigma54-specific transcriptional regulator 2977204..2978550 Rhizobium leguminosarum bv. trifolii WSM1325 8013900 YP_002976779.1 CDS Rleg_2981 NC_012850.1 2978583 2979110 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rec:RHECIAT_CH0003141 leucine-responsive transcriptional regulator protein, AsnC family; AsnC family transcriptional regulator complement(2978583..2979110) Rhizobium leguminosarum bv. trifolii WSM1325 8013901 YP_002976780.1 CDS Rleg_2982 NC_012850.1 2979281 2980255 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rec:RHECIAT_CH0003142 thioredoxin reductase (NADPH) protein; thioredoxin reductase 2979281..2980255 Rhizobium leguminosarum bv. trifolii WSM1325 8015749 YP_002976781.1 CDS Rleg_2983 NC_012850.1 2980263 2981174 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003143 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 2980263..2981174 Rhizobium leguminosarum bv. trifolii WSM1325 8013902 YP_002976782.1 CDS Rleg_2984 NC_012850.1 2981728 2982021 D SMART: regulatory protein ArsR; KEGG: ret:RHE_CH02977 ArsR family transcriptional regulator; ArsR family transcriptional regulator 2981728..2982021 Rhizobium leguminosarum bv. trifolii WSM1325 8013903 YP_002976783.1 CDS Rleg_2985 NC_012850.1 2982023 2983189 D PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_1336 major facilitator family transporter; major facilitator superfamily protein 2982023..2983189 Rhizobium leguminosarum bv. trifolii WSM1325 8013904 YP_002976784.1 CDS Rleg_2986 NC_012850.1 2983215 2984339 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rec:RHECIAT_CH0003145 glycerol trinitrate reductase protein; NADH:flavin oxidoreductase 2983215..2984339 Rhizobium leguminosarum bv. trifolii WSM1325 8013905 YP_002976785.1 CDS Rleg_2987 NC_012850.1 2984411 2985211 D Contains selenocysteine; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: ret:RHE_CH02980 antibiotic resistance (streptomycin kinase) protein; aminoglycoside/hydroxyurea antibiotic resistance kinase 2984411..2985211 Rhizobium leguminosarum bv. trifolii WSM1325 8015750 YP_002976786.1 CDS Rleg_2988 NC_012850.1 2985208 2986230 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH02989 hypothetical protein; NAD-dependent epimerase/dehydratase complement(2985208..2986230) Rhizobium leguminosarum bv. trifolii WSM1325 8013906 YP_002976787.1 CDS Rleg_2989 NC_012850.1 2986325 2987224 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003148 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 2986325..2987224 Rhizobium leguminosarum bv. trifolii WSM1325 8013907 YP_002976788.1 CDS Rleg_2990 NC_012850.1 2987333 2987848 D PFAM: protein of unknown function UPF0157; KEGG: rec:RHECIAT_CH0003149 hypothetical protein; hypothetical protein 2987333..2987848 Rhizobium leguminosarum bv. trifolii WSM1325 8013908 YP_002976789.1 CDS Rleg_2991 NC_012850.1 2987845 2988132 R KEGG: ret:RHE_CH02992 hypothetical protein; hypothetical protein complement(2987845..2988132) Rhizobium leguminosarum bv. trifolii WSM1325 8013909 YP_002976790.1 CDS Rleg_2992 NC_012850.1 2988364 2989461 D PFAM: sodium/calcium exchanger membrane region; KEGG: rec:RHECIAT_CH0003151 LPS-associated cation exporter (Ca2+/H+ antiporter) protein; sodium/calcium exchanger membrane region 2988364..2989461 Rhizobium leguminosarum bv. trifolii WSM1325 8013910 YP_002976791.1 CDS Rleg_2993 NC_012850.1 2989566 2990435 R KEGG: rec:RHECIAT_CH0003152 3-deoxy-manno-octulosonate cytidylyltransferase protein; 3-deoxy-manno-octulosonate cytidylyltransferase complement(2989566..2990435) Rhizobium leguminosarum bv. trifolii WSM1325 8013911 YP_002976792.1 CDS Rleg_2994 NC_012850.1 2990482 2991384 R PFAM: glycosyl transferase family 8; KEGG: ret:RHE_CH02996 galactosyltransferase protein; glycosyl transferase family protein complement(2990482..2991384) Rhizobium leguminosarum bv. trifolii WSM1325 8015751 YP_002976793.1 CDS Rleg_2995 NC_012850.1 2991566 2991952 R PFAM: PilT protein domain protein; KEGG: ret:RHE_CH02997 hypothetical protein; PilT protein domain-containing protein complement(2991566..2991952) Rhizobium leguminosarum bv. trifolii WSM1325 8013912 YP_002976794.1 CDS Rleg_2996 NC_012850.1 2991957 2992247 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: jan:Jann_1433 prevent-host-death protein; prevent-host-death family protein complement(2991957..2992247) Rhizobium leguminosarum bv. trifolii WSM1325 8013913 YP_002976795.1 CDS Rleg_2997 NC_012850.1 2992318 2993520 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2992318..2993520) Rhizobium leguminosarum bv. trifolii WSM1325 8013914 YP_002976796.1 CDS Rleg_2998 NC_012850.1 2993905 2996280 D PFAM: Vault protein inter-alpha-trypsin domain protein; von Willebrand factor type A; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; KEGG: rec:RHECIAT_CH0003156 vault protein inter-alpha-trypsin domain; Vault protein inter-alpha-trypsin domain-containing protein 2993905..2996280 Rhizobium leguminosarum bv. trifolii WSM1325 8013915 YP_002976797.1 CDS Rleg_2999 NC_012850.1 2996270 2997043 D TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: ret:RHE_CH03001 hypothetical protein; sortase family protein 2996270..2997043 Rhizobium leguminosarum bv. trifolii WSM1325 8013916 YP_002976798.1 CDS Rleg_3000 NC_012850.1 2997103 2998245 D PFAM: glucose sorbosone dehydrogenase; KEGG: ret:RHE_CH03002 glucose dehydrogenase B protein; glucose sorbosone dehydrogenase 2997103..2998245 Rhizobium leguminosarum bv. trifolii WSM1325 8013917 YP_002976799.1 CDS Rleg_3001 NC_012850.1 2998250 2998720 R KEGG: rec:RHECIAT_CH0003159 hypothetical protein; hypothetical protein complement(2998250..2998720) Rhizobium leguminosarum bv. trifolii WSM1325 8013918 YP_002976800.1 CDS Rleg_3002 NC_012850.1 2998820 2999683 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0003160 transporter protein; hypothetical protein 2998820..2999683 Rhizobium leguminosarum bv. trifolii WSM1325 8013919 YP_002976801.1 CDS Rleg_3003 NC_012850.1 3000196 3000411 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rec:RHECIAT_CH0003162 cold shock protein; cold-shock protein 3000196..3000411 Rhizobium leguminosarum bv. trifolii WSM1325 8013920 YP_002976802.1 CDS Rleg_3004 NC_012850.1 3000555 3001007 D PFAM: BA14K family protein; KEGG: rec:RHECIAT_CH0003163 hypothetical protein; BA14K family protein 3000555..3001007 Rhizobium leguminosarum bv. trifolii WSM1325 8013921 YP_002976803.1 CDS Rleg_3005 NC_012850.1 3001233 3003230 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_PC0000478 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3001233..3003230) Rhizobium leguminosarum bv. trifolii WSM1325 8013922 YP_002976804.1 CDS Rleg_3007 NC_012850.1 3004983 3005951 D KEGG: ABC-type nitrate/sulfonate/bicarbonate transport system protein, periplasmic component (substrate binding protein) ; K02051 sulfonate/nitrate/taurine transport system substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 3004983..3005951 Rhizobium leguminosarum bv. trifolii WSM1325 8013924 YP_002976805.1 CDS Rleg_3008 NC_012850.1 3005971 3006813 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nrtB; nitrate ABC transporter ; K02050 sulfonate/nitrate/taurine transport system permease protein; ABC transporter permease 3005971..3006813 Rhizobium leguminosarum bv. trifolii WSM1325 8013925 YP_002976806.1 CDS Rleg_3009 NC_012850.1 3006818 3007555 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aliphatic sulphonate ABC transporter ; K02049 sulfonate/nitrate/taurine transport system ATP-binding protein; ABC transporter 3006818..3007555 Rhizobium leguminosarum bv. trifolii WSM1325 8013926 YP_002976807.1 CDS Rleg_3010 NC_012850.1 3007584 3008960 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH03009 two-component sensor histidine kinase protein; histidine kinase complement(3007584..3008960) Rhizobium leguminosarum bv. trifolii WSM1325 8013927 YP_002976808.1 CDS Rleg_3011 NC_012850.1 3008985 3009686 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0003167 probable two-component response regulator protein; transcriptional regulator complement(3008985..3009686) Rhizobium leguminosarum bv. trifolii WSM1325 8015752 YP_002976809.1 CDS Rleg_3012 NC_012850.1 3009687 3010178 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0003168 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator complement(3009687..3010178) Rhizobium leguminosarum bv. trifolii WSM1325 8013928 YP_002976810.1 CDS Rleg_3014 NC_012850.1 3010899 3010994 R KEGG: rec:RHECIAT_CH0003169 hypothetical protein; hypothetical protein complement(3010899..3010994) Rhizobium leguminosarum bv. trifolii WSM1325 8013930 YP_002976811.1 CDS Rleg_3015 NC_012850.1 3011357 3011974 R PFAM: protein of unknown function DUF1236; SH3 type 3 domain protein; KEGG: ret:RHE_CH03012 hypothetical protein; hypothetical protein complement(3011357..3011974) Rhizobium leguminosarum bv. trifolii WSM1325 8013931 YP_002976812.1 CDS Rleg_3016 NC_012850.1 3012261 3012920 D PFAM: beta-lactamase; KEGG: ret:RHE_CH03013 hydrolase protein; beta-lactamase 3012261..3012920 Rhizobium leguminosarum bv. trifolii WSM1325 8013932 YP_002976813.1 CDS Rleg_3017 NC_012850.1 3012934 3013275 R TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: rec:RHECIAT_CH0003172 chaperone methionine--tRNA ligase protein; export-related chaperone CsaA complement(3012934..3013275) Rhizobium leguminosarum bv. trifolii WSM1325 8013933 YP_002976814.1 CDS Rleg_3018 NC_012850.1 3013286 3014113 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(3013286..3014113) Rhizobium leguminosarum bv. trifolii WSM1325 8013934 YP_002976815.1 CDS Rleg_3019 NC_012850.1 3014115 3014615 R PFAM: hypothetical protein; KEGG: rec:RHECIAT_CH0003174 hypothetical protein; hypothetical protein complement(3014115..3014615) Rhizobium leguminosarum bv. trifolii WSM1325 8015753 YP_002976816.1 CDS Rleg_3020 NC_012850.1 3015005 3015265 R PFAM: protein of unknown function DUF526; KEGG: ret:RHE_CH03017 hypothetical protein; hypothetical protein complement(3015005..3015265) Rhizobium leguminosarum bv. trifolii WSM1325 8013935 YP_002976817.1 CDS Rleg_3021 NC_012850.1 3015467 3016315 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3015467..3016315 Rhizobium leguminosarum bv. trifolii WSM1325 8013936 YP_002976818.1 CDS Rleg_3022 NC_012850.1 3016332 3017432 D PFAM: protein of unknown function DUF185; KEGG: rec:RHECIAT_CH0003177 hypothetical protein; hypothetical protein 3016332..3017432 Rhizobium leguminosarum bv. trifolii WSM1325 8013937 YP_002976819.1 CDS Rleg_3023 NC_012850.1 3017544 3018338 D PFAM: protein of unknown function DUF152; KEGG: rec:RHECIAT_CH0003178 hypothetical protein; hypothetical protein 3017544..3018338 Rhizobium leguminosarum bv. trifolii WSM1325 8013938 YP_002976820.1 CDS Rleg_3024 NC_012850.1 3018344 3019495 D PFAM: peptidase M24; creatinase; KEGG: rec:RHECIAT_CH0003179 probable Xaa-Pro dipeptidase protein; peptidase M24 3018344..3019495 Rhizobium leguminosarum bv. trifolii WSM1325 8013939 YP_002976821.1 CDS Rleg_3025 NC_012850.1 3019587 3020408 D KEGG: ret:RHE_CH03022 hypothetical protein; hypothetical protein 3019587..3020408 Rhizobium leguminosarum bv. trifolii WSM1325 8013940 YP_002976822.1 CDS Rleg_3026 NC_012850.1 3020514 3021446 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 3020514..3021446 Rhizobium leguminosarum bv. trifolii WSM1325 8013941 YP_002976823.1 CDS Rleg_3027 NC_012850.1 3021668 3023218 R KEGG: ret:RHE_CH03024 hypothetical protein; hypothetical protein complement(3021668..3023218) Rhizobium leguminosarum bv. trifolii WSM1325 8013942 YP_002976824.1 CDS Rleg_3028 NC_012850.1 3023321 3025405 R KEGG: atc:AGR_C_4046 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with MHYT sensor complement(3023321..3025405) Rhizobium leguminosarum bv. trifolii WSM1325 8013943 YP_002976825.1 CDS Rleg_3029 NC_012850.1 3025702 3026310 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 3025702..3026310 Rhizobium leguminosarum bv. trifolii WSM1325 8013944 YP_002976826.1 CDS Rleg_3030 NC_012850.1 3026496 3028847 D KEGG: rec:RHECIAT_CH0003185 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3026496..3028847 Rhizobium leguminosarum bv. trifolii WSM1325 8013945 YP_002976827.1 CDS Rleg_3031 NC_012850.1 3028873 3029586 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ret:RHE_CH03027 amino acid ABC transporter, substrate-binding protein; family 3 extracellular solute-binding protein 3028873..3029586 Rhizobium leguminosarum bv. trifolii WSM1325 8013946 YP_002976828.1 CDS Rleg_3032 NC_012850.1 3029778 3030509 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 3029778..3030509 Rhizobium leguminosarum bv. trifolii WSM1325 8013947 YP_002976829.1 CDS Rleg_3033 NC_012850.1 3030506 3030967 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003188 acetyltransferase protein; N-acetyltransferase GCN5 3030506..3030967 Rhizobium leguminosarum bv. trifolii WSM1325 8013948 YP_002976830.1 CDS clpS NC_012850.1 3030979 3031290 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor complement(3030979..3031290) Rhizobium leguminosarum bv. trifolii WSM1325 8013949 YP_002976831.1 CDS Rleg_3035 NC_012850.1 3031633 3032736 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3031633..3032736 Rhizobium leguminosarum bv. trifolii WSM1325 8013950 YP_002976832.1 CDS Rleg_3036 NC_012850.1 3032809 3033921 R KEGG: rec:RHECIAT_CH0003191 hypothetical protein; hypothetical protein complement(3032809..3033921) Rhizobium leguminosarum bv. trifolii WSM1325 8013951 YP_002976833.1 CDS Rleg_3037 NC_012850.1 3034003 3034494 D PFAM: MaoC domain protein dehydratase; KEGG: ret:RHE_CH03033 enoyl-CoA hydratase protein; MaoC domain-containing protein dehydratase 3034003..3034494 Rhizobium leguminosarum bv. trifolii WSM1325 8013952 YP_002976834.1 CDS Rleg_3038 NC_012850.1 3034491 3034958 D PFAM: MaoC domain protein dehydratase; KEGG: rec:RHECIAT_CH0003193 enoyl-CoA hydratase protein; MaoC domain-containing protein dehydratase 3034491..3034958 Rhizobium leguminosarum bv. trifolii WSM1325 8015754 YP_002976835.1 CDS Rleg_3039 NC_012850.1 3034983 3035525 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3034983..3035525) Rhizobium leguminosarum bv. trifolii WSM1325 8013953 YP_002976836.1 CDS Rleg_3040 NC_012850.1 3035641 3036525 R PFAM: cytochrome C1; KEGG: ret:RHE_CH03036 ubiquinol--cytochrome C reductase, cytochrome C1 subunit protein; cytochrome C1 complement(3035641..3036525) Rhizobium leguminosarum bv. trifolii WSM1325 8013954 YP_002976837.1 CDS Rleg_3041 NC_012850.1 3036551 3037819 R PFAM: cytochrome b/b6 domain; KEGG: rec:RHECIAT_CH0003196 ubiquinol-cytochrome C reductase protein, cytochrome b subunit; cytochrome b/b6 domain protein complement(3036551..3037819) Rhizobium leguminosarum bv. trifolii WSM1325 8013955 YP_002976838.1 CDS Rleg_3042 NC_012850.1 3037834 3038412 R TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ret:RHE_CH03038 ubiquinol-cytochrome-c reductase, iron-sulfur subunit protein; ubiquinol-cytochrome C reductase, iron-sulfur subunit complement(3037834..3038412) Rhizobium leguminosarum bv. trifolii WSM1325 8013956 YP_002976839.1 CDS Rleg_3043 NC_012850.1 3038697 3039629 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: ret:RHE_CH03039 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 3038697..3039629 Rhizobium leguminosarum bv. trifolii WSM1325 8013957 YP_002976840.1 CDS Rleg_3044 NC_012850.1 3039585 3041498 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03040 ABC transporter ATP-binding protein; ABC transporter complement(3039585..3041498) Rhizobium leguminosarum bv. trifolii WSM1325 8013958 YP_002976841.1 CDS Rleg_3045 NC_012850.1 3041661 3041891 D KEGG: ret:RHE_CH03041 hypothetical protein; hypothetical protein 3041661..3041891 Rhizobium leguminosarum bv. trifolii WSM1325 8013959 YP_002976842.1 CDS Rleg_3046 NC_012850.1 3042004 3043860 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003201 probable ABC transporter, ATP-binding protein; ABC transporter complement(3042004..3043860) Rhizobium leguminosarum bv. trifolii WSM1325 8013960 YP_002976843.1 CDS Rleg_3047 NC_012850.1 3044246 3044707 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rec:RHECIAT_CH0003203 tRNA/rRNA aminotransferase/methyltransferase protein; tRNA/rRNA methyltransferase SpoU 3044246..3044707 Rhizobium leguminosarum bv. trifolii WSM1325 8015755 YP_002976844.1 CDS Rleg_3048 NC_012850.1 3044926 3046572 D TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: ret:RHE_CH03044 sodium-dependent phosphate transporter protein; sodium-dependent inorganic phosphate (Pi) transporter 3044926..3046572 Rhizobium leguminosarum bv. trifolii WSM1325 8013961 YP_002976845.1 CDS Rleg_3049 NC_012850.1 3046576 3046836 R KEGG: ret:RHE_CH03045 hypothetical protein; hypothetical protein complement(3046576..3046836) Rhizobium leguminosarum bv. trifolii WSM1325 8013962 YP_002976846.1 CDS Rleg_3050 NC_012850.1 3047010 3047921 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 3047010..3047921 Rhizobium leguminosarum bv. trifolii WSM1325 8015756 YP_002976847.1 CDS Rleg_3051 NC_012850.1 3048025 3048294 D KEGG: rec:RHECIAT_CH0003207 hypothetical protein; hypothetical protein 3048025..3048294 Rhizobium leguminosarum bv. trifolii WSM1325 8013963 YP_002976848.1 CDS Rleg_3052 NC_012850.1 3048409 3048594 D KEGG: rec:RHECIAT_CH0003208 hypothetical protein; hypothetical protein 3048409..3048594 Rhizobium leguminosarum bv. trifolii WSM1325 8013964 YP_002976849.1 CDS Rleg_3053 NC_012850.1 3048595 3049848 R PFAM: Polynucleotide adenylyltransferase region; KEGG: rec:RHECIAT_CH0003209 poly(A) polymerase protein; Polynucleotide adenylyltransferase region complement(3048595..3049848) Rhizobium leguminosarum bv. trifolii WSM1325 8013965 YP_002976850.1 CDS Rleg_3054 NC_012850.1 3049845 3050495 R PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0003210 probable NTP pyrophosphohydrolase protein, MutT/NUDIX family; NUDIX hydrolase complement(3049845..3050495) Rhizobium leguminosarum bv. trifolii WSM1325 8013966 YP_002976851.1 CDS Rleg_3055 NC_012850.1 3050492 3051115 R PFAM: protein of unknown function DUF1285; KEGG: rec:RHECIAT_CH0003211 hypothetical protein; hypothetical protein complement(3050492..3051115) Rhizobium leguminosarum bv. trifolii WSM1325 8013967 YP_002976852.1 CDS Rleg_3056 NC_012850.1 3051274 3052284 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: ret:RHE_CH03052 methanol dehydrogenase regulator MoxR-like protein; ATPase 3051274..3052284 Rhizobium leguminosarum bv. trifolii WSM1325 8013968 YP_002976853.1 CDS Rleg_3057 NC_012850.1 3052298 3053218 D KEGG: rec:RHECIAT_CH0003213 hypothetical protein; hypothetical protein 3052298..3053218 Rhizobium leguminosarum bv. trifolii WSM1325 8013969 YP_002976854.1 CDS Rleg_3058 NC_012850.1 3053215 3056028 D TIGRFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0003214 hypothetical protein; hypothetical protein 3053215..3056028 Rhizobium leguminosarum bv. trifolii WSM1325 8013970 YP_002976855.1 CDS Rleg_3059 NC_012850.1 3056030 3058099 D PFAM: protein of unknown function DUF1355; KEGG: rec:RHECIAT_CH0003215 hypothetical protein; hypothetical protein 3056030..3058099 Rhizobium leguminosarum bv. trifolii WSM1325 8013971 YP_002976856.1 CDS Rleg_3060 NC_012850.1 3058104 3058520 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003216 acetyltransferase protein; N-acetyltransferase GCN5 3058104..3058520 Rhizobium leguminosarum bv. trifolii WSM1325 8013972 YP_002976857.1 CDS Rleg_3061 NC_012850.1 3058564 3059106 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003217 probable acetyltransferase protein; N-acetyltransferase GCN5 complement(3058564..3059106) Rhizobium leguminosarum bv. trifolii WSM1325 8013973 YP_002976858.1 CDS Rleg_3062 NC_012850.1 3059322 3060332 D KEGG: ret:RHE_CH03061 glutathione S-transferase protein; glutathione transferase 3059322..3060332 Rhizobium leguminosarum bv. trifolii WSM1325 8013974 YP_002976859.1 CDS Rleg_3063 NC_012850.1 3060414 3060890 R PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0003219 hydrolase protein, MutT/NUDIX family; NUDIX hydrolase complement(3060414..3060890) Rhizobium leguminosarum bv. trifolii WSM1325 8013975 YP_002976860.1 CDS Rleg_3064 NC_012850.1 3060964 3061872 D PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0003220 phosphoesterase protein; metallophosphoesterase 3060964..3061872 Rhizobium leguminosarum bv. trifolii WSM1325 8013976 YP_002976861.1 CDS Rleg_3065 NC_012850.1 3062032 3062592 D KEGG: rec:RHECIAT_CH0003221 hypothetical protein; hypothetical protein 3062032..3062592 Rhizobium leguminosarum bv. trifolii WSM1325 8013977 YP_002976862.1 CDS Rleg_3066 NC_012850.1 3062780 3063289 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: rec:RHECIAT_CH0003222 RNA polymerase sigma factor protein (sigma-24); ECF subfamily RNA polymerase sigma-24 subunit 3062780..3063289 Rhizobium leguminosarum bv. trifolii WSM1325 8013978 YP_002976863.1 CDS Rleg_3067 NC_012850.1 3063292 3064137 D KEGG: rec:RHECIAT_CH0003223 hypothetical protein; transmembrane anti-sigma factor 3063292..3064137 Rhizobium leguminosarum bv. trifolii WSM1325 8015757 YP_002976864.1 CDS Rleg_3068 NC_012850.1 3064462 3065442 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: qor; quinone oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(3064462..3065442) Rhizobium leguminosarum bv. trifolii WSM1325 8013979 YP_002976865.1 CDS Rleg_3069 NC_012850.1 3065544 3065957 D PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator protein; HxlR family transcriptional regulator 3065544..3065957 Rhizobium leguminosarum bv. trifolii WSM1325 8015758 YP_002976866.1 CDS Rleg_3070 NC_012850.1 3066058 3067740 R TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rec:RHECIAT_CH0003224 2-isopropylmalate synthase protein; 2-isopropylmalate synthase complement(3066058..3067740) Rhizobium leguminosarum bv. trifolii WSM1325 8013980 YP_002976867.1 CDS Rleg_3071 NC_012850.1 3068239 3069438 R TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: rec:RHECIAT_CH0003225 benzoate transporter protein; benzoate transporter complement(3068239..3069438) Rhizobium leguminosarum bv. trifolii WSM1325 8013981 YP_002976868.1 CDS Rleg_3072 NC_012850.1 3069678 3070262 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(3069678..3070262) Rhizobium leguminosarum bv. trifolii WSM1325 8013982 YP_002976869.1 CDS Rleg_3073 NC_012850.1 3070588 3071379 D KEGG: rec:RHECIAT_CH0003228 hypothetical protein; periplasmic ligand-binding sensor protein 3070588..3071379 Rhizobium leguminosarum bv. trifolii WSM1325 8013983 YP_002976870.1 CDS Rleg_3074 NC_012850.1 3071505 3071969 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(3071505..3071969) Rhizobium leguminosarum bv. trifolii WSM1325 8013984 YP_002976871.1 CDS Rleg_3075 NC_012850.1 3071969 3072883 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rec:RHECIAT_CH0003230 probable cation efflux protein; cation diffusion facilitator family transporter complement(3071969..3072883) Rhizobium leguminosarum bv. trifolii WSM1325 8013985 YP_002976872.1 CDS Rleg_3076 NC_012850.1 3073037 3073708 R KEGG: rec:RHECIAT_CH0003231 hypothetical protein; hypothetical protein complement(3073037..3073708) Rhizobium leguminosarum bv. trifolii WSM1325 8013986 YP_002976873.1 CDS Rleg_3077 NC_012850.1 3073724 3073963 R KEGG: rec:RHECIAT_CH0003232 hypothetical protein; hypothetical protein complement(3073724..3073963) Rhizobium leguminosarum bv. trifolii WSM1325 8013987 YP_002976874.1 CDS Rleg_3078 NC_012850.1 3074092 3076281 R trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase complement(3074092..3076281) Rhizobium leguminosarum bv. trifolii WSM1325 8013988 YP_002976875.1 CDS Rleg_3079 NC_012850.1 3076546 3078795 R TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rec:RHECIAT_CH0003234 probable outer membrane iron receptor protein; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor complement(3076546..3078795) Rhizobium leguminosarum bv. trifolii WSM1325 8013989 YP_002976876.1 CDS Rleg_3080 NC_012850.1 3079065 3080015 D PFAM: Extensin family protein; KEGG: rec:RHECIAT_CH0003235 hypothetical protein; extensin family protein 3079065..3080015 Rhizobium leguminosarum bv. trifolii WSM1325 8013990 YP_002976877.1 CDS Rleg_3081 NC_012850.1 3080100 3080345 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: mlo:msr2423 hypothetical protein; CopG family transcriptional regulator 3080100..3080345 Rhizobium leguminosarum bv. trifolii WSM1325 8013991 YP_002976878.1 CDS Rleg_3082 NC_012850.1 3080342 3080632 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: atc:AGR_C_3278 hypothetical protein; RelE/StbE family addiction module toxin 3080342..3080632 Rhizobium leguminosarum bv. trifolii WSM1325 8013992 YP_002976879.1 CDS Rleg_3083 NC_012850.1 3080641 3082320 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(3080641..3082320) Rhizobium leguminosarum bv. trifolii WSM1325 8013993 YP_002976880.1 CDS Rleg_3084 NC_012850.1 3082480 3083010 D PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0003237 hypothetical protein; hypothetical protein 3082480..3083010 Rhizobium leguminosarum bv. trifolii WSM1325 8013994 YP_002976881.1 CDS Rleg_3085 NC_012850.1 3083093 3084793 R KEGG: ret:RHE_CH03079 hypothetical protein; hypothetical protein complement(3083093..3084793) Rhizobium leguminosarum bv. trifolii WSM1325 8013995 YP_002976882.1 CDS Rleg_3087 NC_012850.1 3085271 3085996 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; SMART: regulatory protein LuxR; KEGG: rec:RHECIAT_CH0003239 probable transcriptional regulator protein, LuxR family; LuxR family transcriptional regulator 3085271..3085996 Rhizobium leguminosarum bv. trifolii WSM1325 8013997 YP_002976883.1 CDS Rleg_3088 NC_012850.1 3086043 3086504 D PFAM: PAS fold-3 domain protein; KEGG: ret:RHE_CH03081 hypothetical protein; PAS fold-3 domain-containing protein 3086043..3086504 Rhizobium leguminosarum bv. trifolii WSM1325 8013998 YP_002976884.1 CDS Rleg_3089 NC_012850.1 3086516 3087646 R KEGG: rec:RHECIAT_CH0003240 hypothetical protein; hypothetical protein complement(3086516..3087646) Rhizobium leguminosarum bv. trifolii WSM1325 8015759 YP_002976885.1 CDS Rleg_3090 NC_012850.1 3087795 3088868 R KEGG: ret:RHE_CH03083 hypothetical protein; hypothetical protein complement(3087795..3088868) Rhizobium leguminosarum bv. trifolii WSM1325 8013999 YP_002976886.1 CDS Rleg_3091 NC_012850.1 3088945 3089547 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(3088945..3089547) Rhizobium leguminosarum bv. trifolii WSM1325 8014000 YP_002976887.1 CDS Rleg_3092 NC_012850.1 3089784 3090740 D TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rec:RHECIAT_CH0003243 proline/glycine betaine ABC transporter, substrate-binding protein; choline ABC transporter periplasmic-binding protein 3089784..3090740 Rhizobium leguminosarum bv. trifolii WSM1325 8015760 YP_002976888.1 CDS Rleg_3093 NC_012850.1 3090801 3091658 D TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003244 proline/glycine betaine ABC transporter, permease protein; choline ABC transporter permease 3090801..3091658 Rhizobium leguminosarum bv. trifolii WSM1325 8014001 YP_002976889.1 CDS Rleg_3094 NC_012850.1 3091655 3092707 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003245 proline/glycine betaine ABC transporter, ATP-binding protein; ABC transporter 3091655..3092707 Rhizobium leguminosarum bv. trifolii WSM1325 8014002 YP_002976890.1 CDS Rleg_3095 NC_012850.1 3092739 3093488 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rec:RHECIAT_CH0003246 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3092739..3093488 Rhizobium leguminosarum bv. trifolii WSM1325 8014003 YP_002976891.1 CDS Rleg_3096 NC_012850.1 3093604 3093921 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rec:RHECIAT_CH0003247 transcriptional regulator protein (repressor of nodulation genes), ArsR family; ArsR family transcriptional regulator 3093604..3093921 Rhizobium leguminosarum bv. trifolii WSM1325 8014004 YP_002976892.1 CDS Rleg_3097 NC_012850.1 3094277 3095602 D catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase 3094277..3095602 Rhizobium leguminosarum bv. trifolii WSM1325 8014005 YP_002976893.1 CDS Rleg_3098 NC_012850.1 3095789 3096703 R KEGG: rec:RHECIAT_CH0003249 phosphohydrolase protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(3095789..3096703) Rhizobium leguminosarum bv. trifolii WSM1325 8014006 YP_002976894.1 CDS Rleg_3099 NC_012850.1 3097194 3098297 D PFAM: Extracellular ligand-binding receptor; KEGG: rec:RHECIAT_CH0003251 amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor 3097194..3098297 Rhizobium leguminosarum bv. trifolii WSM1325 8014007 YP_002976895.1 CDS Rleg_3100 NC_012850.1 3098370 3098660 R hypothetical protein complement(3098370..3098660) Rhizobium leguminosarum bv. trifolii WSM1325 8014008 YP_002976896.1 CDS Rleg_3101 NC_012850.1 3098811 3100508 D KEGG: ret:RHE_CH03094 adenine deaminase protein; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; adenine deaminase 3098811..3100508 Rhizobium leguminosarum bv. trifolii WSM1325 8014009 YP_002976897.1 CDS Rleg_3102 NC_012850.1 3100571 3102217 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rec:RHECIAT_CH0003254 probable alpha-glucosidase protein; alpha amylase complement(3100571..3102217) Rhizobium leguminosarum bv. trifolii WSM1325 8014010 YP_002976898.1 CDS Rleg_3103 NC_012850.1 3102504 3104084 D PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_CH0003255 oligopeptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein 3102504..3104084 Rhizobium leguminosarum bv. trifolii WSM1325 8014011 YP_002976899.1 CDS Rleg_3104 NC_012850.1 3104133 3105056 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003256 oligopeptide ABC transporter, permease protein; ABC transporter permease 3104133..3105056 Rhizobium leguminosarum bv. trifolii WSM1325 8014012 YP_002976900.1 CDS Rleg_3105 NC_012850.1 3105053 3105970 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH03098 oligopeptide ABC transporter, permease protein; ABC transporter permease 3105053..3105970 Rhizobium leguminosarum bv. trifolii WSM1325 8014013 YP_002976901.1 CDS Rleg_3106 NC_012850.1 3105971 3106963 D KEGG: ret:RHE_CH03099 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 3105971..3106963 Rhizobium leguminosarum bv. trifolii WSM1325 8015761 YP_002976902.1 CDS Rleg_3107 NC_012850.1 3106956 3107942 D KEGG: rec:RHECIAT_CH0003259 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 3106956..3107942 Rhizobium leguminosarum bv. trifolii WSM1325 8014014 YP_002976903.1 CDS Rleg_3108 NC_012850.1 3108109 3108450 D KEGG: ret:RHE_CH03101 hypothetical protein; hypothetical protein 3108109..3108450 Rhizobium leguminosarum bv. trifolii WSM1325 8014015 YP_002976904.1 CDS Rleg_3109 NC_012850.1 3108603 3109523 D PFAM: PfkB domain protein; KEGG: rec:RHECIAT_CH0003261 2-dehydro-3-deoxygluconokinase protein; PfkB domain-containing protein 3108603..3109523 Rhizobium leguminosarum bv. trifolii WSM1325 8014016 YP_002976905.1 CDS Rleg_3110 NC_012850.1 3109651 3109842 R KEGG: ret:RHE_CH03103 glutamine synthetase translation inhibitor protein; glutamine synthetase complement(3109651..3109842) Rhizobium leguminosarum bv. trifolii WSM1325 8014017 YP_002976906.1 CDS Rleg_3111 NC_012850.1 3110275 3111315 D PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ret:RHE_CH03104 glutamine synthetase II protein; glutamate--ammonia ligase 3110275..3111315 Rhizobium leguminosarum bv. trifolii WSM1325 8014018 YP_002976907.1 CDS Rleg_3112 NC_012850.1 3111555 3112736 D PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH03105 glycosyltransferase; group 1 glycosyl transferase 3111555..3112736 Rhizobium leguminosarum bv. trifolii WSM1325 8014019 YP_002976908.1 CDS Rleg_3113 NC_012850.1 3112743 3113756 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ret:RHE_CH03106 lipase protein; Alpha/beta hydrolase fold-3 domain-containing protein complement(3112743..3113756) Rhizobium leguminosarum bv. trifolii WSM1325 8015762 YP_002976909.1 CDS Rleg_3114 NC_012850.1 3113918 3114355 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0003267 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator 3113918..3114355 Rhizobium leguminosarum bv. trifolii WSM1325 8014020 YP_002976910.1 CDS engA NC_012850.1 3114652 3116076 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(3114652..3116076) Rhizobium leguminosarum bv. trifolii WSM1325 8014021 YP_002976911.1 CDS Rleg_3116 NC_012850.1 3116095 3116778 R KEGG: rec:RHECIAT_CH0003269 hypothetical protein; hypothetical protein complement(3116095..3116778) Rhizobium leguminosarum bv. trifolii WSM1325 8014022 YP_002976912.1 CDS Rleg_3117 NC_012850.1 3117085 3117669 R PFAM: NnrUfamily protein; KEGG: rec:RHECIAT_CH0003270 nitrate reductase protein; NnrU family protein complement(3117085..3117669) Rhizobium leguminosarum bv. trifolii WSM1325 8014023 YP_002976913.1 CDS Rleg_3118 NC_012850.1 3117790 3118776 D KEGG: rec:RHECIAT_CH0003271 hypothetical protein; hypothetical protein 3117790..3118776 Rhizobium leguminosarum bv. trifolii WSM1325 8014024 YP_002976914.1 CDS Rleg_3119 NC_012850.1 3119048 3120313 R in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transporter complement(3119048..3120313) Rhizobium leguminosarum bv. trifolii WSM1325 8014025 YP_002976915.1 CDS Rleg_3120 NC_012850.1 3120438 3121622 R PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0003273 permease protein; hypothetical protein complement(3120438..3121622) Rhizobium leguminosarum bv. trifolii WSM1325 8014026 YP_002976916.1 CDS Rleg_3121 NC_012850.1 3121791 3122366 D PFAM: transcriptional regulator PadR family protein; KEGG: ret:RHE_CH03114 PadR family transcriptional regulator; PadR family transcriptional regulator 3121791..3122366 Rhizobium leguminosarum bv. trifolii WSM1325 8014027 YP_002976917.1 CDS Rleg_3122 NC_012850.1 3122631 3123389 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase complement(3122631..3123389) Rhizobium leguminosarum bv. trifolii WSM1325 8014028 YP_002976918.1 CDS Rleg_3123 NC_012850.1 3123535 3124599 R PFAM: Luciferase-like monooxygenase; KEGG: rec:RHECIAT_CH0003277 probable oxidoreductase protein; luciferase-like monooxygenase complement(3123535..3124599) Rhizobium leguminosarum bv. trifolii WSM1325 8014029 YP_002976919.1 CDS Rleg_3124 NC_012850.1 3124970 3125260 R PFAM: Excinuclease ABC C subunit domain protein; KEGG: sme:SMc00344 hypothetical protein; excinuclease ABC subunit C complement(3124970..3125260) Rhizobium leguminosarum bv. trifolii WSM1325 8014030 YP_002976920.1 CDS Rleg_3125 NC_012850.1 3125421 3125888 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rec:RHECIAT_CH0003278 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(3125421..3125888) Rhizobium leguminosarum bv. trifolii WSM1325 8014031 YP_002976921.1 CDS Rleg_3126 NC_012850.1 3125989 3127248 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rec:RHECIAT_CH0003279 probable RNA polymerase sigma factor protein (sigma-70); ECF subfamily RNA polymerase sigma-24 subunit complement(3125989..3127248) Rhizobium leguminosarum bv. trifolii WSM1325 8015763 YP_002976922.1 CDS Rleg_3127 NC_012850.1 3127245 3127619 R PFAM: YCII-related; KEGG: rec:RHECIAT_CH0003280 hypothetical protein; hypothetical protein complement(3127245..3127619) Rhizobium leguminosarum bv. trifolii WSM1325 8014032 YP_002976923.1 CDS Rleg_3128 NC_012850.1 3127754 3128395 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cak:Caul_5147 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(3127754..3128395) Rhizobium leguminosarum bv. trifolii WSM1325 8014033 YP_002976924.1 CDS Rleg_3129 NC_012850.1 3128506 3129492 D PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5992 AraC family transcriptional regulator; AraC family transcriptional regulator 3128506..3129492 Rhizobium leguminosarum bv. trifolii WSM1325 8014034 YP_002976925.1 CDS Rleg_3131 NC_012850.1 3129921 3131414 R TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: rec:RHECIAT_CH0003281 glycerol kinase protein; glycerol kinase complement(3129921..3131414) Rhizobium leguminosarum bv. trifolii WSM1325 8014036 YP_002976926.1 CDS Rleg_3132 NC_012850.1 3131572 3132348 D TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0003282 D-beta-hydroxybutyrate dehydrogenase protein; 3-hydroxybutyrate dehydrogenase 3131572..3132348 Rhizobium leguminosarum bv. trifolii WSM1325 8014037 YP_002976927.1 CDS Rleg_3133 NC_012850.1 3132376 3133842 D TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; ferredoxin; KEGG: ret:RHE_CH03124 xanthine dehydrogenase protein; xanthine dehydrogenase small subunit 3132376..3133842 Rhizobium leguminosarum bv. trifolii WSM1325 8015764 YP_002976928.1 CDS Rleg_3134 NC_012850.1 3133842 3134027 D hypothetical protein 3133842..3134027 Rhizobium leguminosarum bv. trifolii WSM1325 8014038 YP_002976929.1 CDS Rleg_3135 NC_012850.1 3134027 3136366 D KEGG: rec:RHECIAT_CH0003284 xanthine dehydrogenase protein, B subunit; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; xanthine dehydrogenase molybdopterin binding subunit 3134027..3136366 Rhizobium leguminosarum bv. trifolii WSM1325 8014039 YP_002976930.1 CDS Rleg_3136 NC_012850.1 3136669 3137484 D TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: rec:RHECIAT_CH0003285 xanthine dehydrogenase protein, C subunit; xanthine dehydrogenase accessory protein XdhC 3136669..3137484 Rhizobium leguminosarum bv. trifolii WSM1325 8014040 YP_002976931.1 CDS Rleg_3137 NC_012850.1 3137460 3137651 R KEGG: rec:RHECIAT_CH0003286 hypothetical protein; hypothetical protein complement(3137460..3137651) Rhizobium leguminosarum bv. trifolii WSM1325 8015765 YP_002976932.1 CDS Rleg_3138 NC_012850.1 3137753 3138649 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003287 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 3137753..3138649 Rhizobium leguminosarum bv. trifolii WSM1325 8014041 YP_002976933.1 CDS Rleg_3139 NC_012850.1 3138731 3139063 R KEGG: rec:RHECIAT_CH0003288 hypothetical protein; hypothetical protein complement(3138731..3139063) Rhizobium leguminosarum bv. trifolii WSM1325 8014042 YP_002976934.1 CDS Rleg_3140 NC_012850.1 3139227 3139913 R PFAM: peptidase S51 dipeptidase E; KEGG: rec:RHECIAT_CH0003289 hypothetical conserved fusion protein; peptidase S51 dipeptidase E complement(3139227..3139913) Rhizobium leguminosarum bv. trifolii WSM1325 8014043 YP_002976935.1 CDS Rleg_3141 NC_012850.1 3140029 3141267 D PFAM: protein of unknown function DUF989; KEGG: rec:RHECIAT_CH0003290 hypothetical protein; hypothetical protein 3140029..3141267 Rhizobium leguminosarum bv. trifolii WSM1325 8014044 YP_002976936.1 CDS Rleg_3142 NC_012850.1 3141264 3142574 D Catalyzes the deamination of guanine; guanine deaminase 3141264..3142574 Rhizobium leguminosarum bv. trifolii WSM1325 8014045 YP_002976937.1 CDS Rleg_3143 NC_012850.1 3142696 3143838 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rec:RHECIAT_CH0003294 L-lactate dehydrogenase (cytochrome) protein; FMN-dependent alpha-hydroxy acid dehydrogenase 3142696..3143838 Rhizobium leguminosarum bv. trifolii WSM1325 8014046 YP_002976938.1 CDS Rleg_3144 NC_012850.1 3143987 3145126 D PFAM: PspA/IM30 family protein; KEGG: rec:RHECIAT_CH0003356 phage-related protein; phage shock protein A, PspA 3143987..3145126 Rhizobium leguminosarum bv. trifolii WSM1325 8014047 YP_002976939.1 CDS Rleg_3145 NC_012850.1 3145131 3145778 D PFAM: protein of unknown function DUF1449; KEGG: ret:RHE_CH03137 hypothetical protein; hypothetical protein 3145131..3145778 Rhizobium leguminosarum bv. trifolii WSM1325 8014048 YP_002976940.1 CDS Rleg_3146 NC_012850.1 3145775 3147532 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: ret:RHE_CH03138 hypothetical protein; hypothetical protein 3145775..3147532 Rhizobium leguminosarum bv. trifolii WSM1325 8014049 YP_002976941.1 CDS Rleg_3147 NC_012850.1 3147668 3148408 R PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0003359 DNA repair protein; metallophosphoesterase complement(3147668..3148408) Rhizobium leguminosarum bv. trifolii WSM1325 8014050 YP_002976942.1 CDS Rleg_3148 NC_012850.1 3148412 3148768 R TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; KEGG: rec:RHECIAT_CH0003360 transthyretin-like protein; hydroxyisourate hydrolase complement(3148412..3148768) Rhizobium leguminosarum bv. trifolii WSM1325 8014051 YP_002976943.1 CDS Rleg_3149 NC_012850.1 3148765 3149286 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(3148765..3149286) Rhizobium leguminosarum bv. trifolii WSM1325 8014052 YP_002976944.1 CDS Rleg_3150 NC_012850.1 3149270 3149632 R PFAM: protein of unknown function DUF86; KEGG: rec:RHECIAT_CH0003362 hypothetical protein; hypothetical protein complement(3149270..3149632) Rhizobium leguminosarum bv. trifolii WSM1325 8015766 YP_002976945.1 CDS Rleg_3151 NC_012850.1 3149629 3150129 R TIGRFAM: OHCU decarboxylase; KEGG: rec:RHECIAT_CH0003363 hypothetical protein; OHCU decarboxylase complement(3149629..3150129) Rhizobium leguminosarum bv. trifolii WSM1325 8014053 YP_002976946.1 CDS Rleg_3152 NC_012850.1 3150129 3151052 R KEGG: ret:RHE_CH03142 chitooligosaccharide deacetylase protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein complement(3150129..3151052) Rhizobium leguminosarum bv. trifolii WSM1325 8014054 YP_002976947.1 CDS Rleg_3153 NC_012850.1 3151167 3151874 R PFAM: protein of unknown function DUF1045; KEGG: rec:RHECIAT_CH0003365 hypothetical protein; hypothetical protein complement(3151167..3151874) Rhizobium leguminosarum bv. trifolii WSM1325 8014055 YP_002976948.1 CDS Rleg_3154 NC_012850.1 3151989 3153167 R PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_CH0003366 probable D-amino acid oxidase protein; FAD dependent oxidoreductase complement(3151989..3153167) Rhizobium leguminosarum bv. trifolii WSM1325 8014056 YP_002976949.1 CDS Rleg_3155 NC_012850.1 3153166 3153882 D PFAM: protein of unknown function DUF752; KEGG: rec:RHECIAT_CH0003367 hypothetical protein; hypothetical protein 3153166..3153882 Rhizobium leguminosarum bv. trifolii WSM1325 8014057 YP_002976950.1 CDS Rleg_3156 NC_012850.1 3153964 3154212 D TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mch:Mchl_3466 addiction module antidote protein, CopG/Arc/MetJ family; CopG/Arc/MetJ family addiction module antidote protein 3153964..3154212 Rhizobium leguminosarum bv. trifolii WSM1325 8014058 YP_002976951.1 CDS Rleg_3157 NC_012850.1 3154209 3154517 D PFAM: plasmid stabilization system; KEGG: mch:Mchl_3467 plasmid stabilization system; plasmid stabilization system 3154209..3154517 Rhizobium leguminosarum bv. trifolii WSM1325 8015767 YP_002976952.1 CDS Rleg_3158 NC_012850.1 3154511 3157906 R KEGG: ret:RHE_CH03146 two-component sensor histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(3154511..3157906) Rhizobium leguminosarum bv. trifolii WSM1325 8014059 YP_002976953.1 CDS Rleg_3159 NC_012850.1 3158226 3158534 D KEGG: rec:RHECIAT_CH0003370 hypothetical protein; hypothetical protein 3158226..3158534 Rhizobium leguminosarum bv. trifolii WSM1325 8014060 YP_002976954.1 CDS Rleg_3160 NC_012850.1 3158662 3160047 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: rec:RHECIAT_CH0003371 probable transporter protein; major facilitator superfamily protein complement(3158662..3160047) Rhizobium leguminosarum bv. trifolii WSM1325 8014061 YP_002976955.1 CDS Rleg_3161 NC_012850.1 3160241 3161188 R PFAM: dihydrodipicolinate synthetase; KEGG: ret:RHE_CH03149 dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase complement(3160241..3161188) Rhizobium leguminosarum bv. trifolii WSM1325 8014062 YP_002976956.1 CDS Rleg_3162 NC_012850.1 3161352 3162380 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ret:RHE_CH03150 LacI family transcription regulator; LacI family transcriptional regulator 3161352..3162380 Rhizobium leguminosarum bv. trifolii WSM1325 8015768 YP_002976957.1 CDS Rleg_3163 NC_012850.1 3162534 3163649 D PFAM: HEAT domain containing protein; KEGG: rec:RHECIAT_CH0003374 DNA alkylation repair protein; HEAT domain containing protein 3162534..3163649 Rhizobium leguminosarum bv. trifolii WSM1325 8015769 YP_002976958.1 CDS Rleg_3164 NC_012850.1 3163881 3165623 D PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: rec:RHECIAT_CH0003375 ATP-dependent RNA helicase protein; DEAD/DEAH box helicase 3163881..3165623 Rhizobium leguminosarum bv. trifolii WSM1325 8014063 YP_002976959.1 CDS Rleg_3165 NC_012850.1 3165720 3166619 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0003376 hypothetical conserved membrane protein; hypothetical protein complement(3165720..3166619) Rhizobium leguminosarum bv. trifolii WSM1325 8014064 YP_002976960.1 CDS Rleg_3166 NC_012850.1 3166987 3168396 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rec:RHECIAT_CH0003377 hypothetical protein; hypothetical protein 3166987..3168396 Rhizobium leguminosarum bv. trifolii WSM1325 8014065 YP_002976961.1 CDS Rleg_3167 NC_012850.1 3168396 3169337 D PFAM: protein of unknown function DUF403; KEGG: rec:RHECIAT_CH0003378 hypothetical protein; hypothetical protein 3168396..3169337 Rhizobium leguminosarum bv. trifolii WSM1325 8014066 YP_002976962.1 CDS Rleg_3168 NC_012850.1 3169350 3170174 D PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: ret:RHE_CH03158 transglutaminase protein; transglutaminase 3169350..3170174 Rhizobium leguminosarum bv. trifolii WSM1325 8014067 YP_002976963.1 CDS Rleg_3169 NC_012850.1 3170537 3171598 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; KEGG: metal dependent phosphohydrolase with a response regulator receiver protein ; K07814 two-component system response regulator; response regulator receiver modulated metal dependent phosphohydrolase 3170537..3171598 Rhizobium leguminosarum bv. trifolii WSM1325 8014068 YP_002976964.1 CDS Rleg_3170 NC_012850.1 3171689 3173428 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(3171689..3173428) Rhizobium leguminosarum bv. trifolii WSM1325 8014069 YP_002976965.1 CDS Rleg_3171 NC_012850.1 3173490 3174923 R PFAM: aldehyde Dehydrogenase; KEGG: ret:RHE_CH03161 aldehyde dehydrogenase; aldehyde Dehydrogenase complement(3173490..3174923) Rhizobium leguminosarum bv. trifolii WSM1325 8014070 YP_002976966.1 CDS Rleg_3172 NC_012850.1 3174993 3175988 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ret:RHE_CH03162 GguC protein; fumarylacetoacetate (FAA) hydrolase complement(3174993..3175988) Rhizobium leguminosarum bv. trifolii WSM1325 8014071 YP_002976967.1 CDS Rleg_3173 NC_012850.1 3176107 3177318 R PFAM: inner-membrane translocator; KEGG: ret:RHE_CH03163 xylose ABC transporter, permease protein; inner-membrane translocator complement(3176107..3177318) Rhizobium leguminosarum bv. trifolii WSM1325 8014072 YP_002976968.1 CDS Rleg_3174 NC_012850.1 3177315 3178853 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03164 xylose ABC transporter, ATP-binding protein; ABC transporter complement(3177315..3178853) Rhizobium leguminosarum bv. trifolii WSM1325 8015770 YP_002976969.1 CDS Rleg_3175 NC_012850.1 3178946 3180010 R KEGG: rec:RHECIAT_CH0003387 xylose ABC transporter, substrate-binding protein; xylose ABC transporter, substrate-binding protein complement(3178946..3180010) Rhizobium leguminosarum bv. trifolii WSM1325 8014073 YP_002976970.1 CDS Rleg_3176 NC_012850.1 3180281 3181285 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH03166 LysR family transcriptional regulator; LysR family transcriptional regulator 3180281..3181285 Rhizobium leguminosarum bv. trifolii WSM1325 8014074 YP_002976971.1 CDS Rleg_3177 NC_012850.1 3181468 3181941 D KEGG: ret:RHE_CH03167 hypothetical protein; hypothetical protein 3181468..3181941 Rhizobium leguminosarum bv. trifolii WSM1325 8015771 YP_002976972.1 CDS Rleg_3178 NC_012850.1 3182252 3183130 D KEGG: ret:RHE_CH03168 hypothetical protein; hypothetical protein 3182252..3183130 Rhizobium leguminosarum bv. trifolii WSM1325 8014075 YP_002976973.1 CDS Rleg_3179 NC_012850.1 3183141 3183377 D hypothetical protein 3183141..3183377 Rhizobium leguminosarum bv. trifolii WSM1325 8014076 YP_002976974.1 CDS Rleg_3182 NC_012850.1 3183648 3183971 R KEGG: rec:RHECIAT_CH0003390 hypothetical protein; hypothetical protein complement(3183648..3183971) Rhizobium leguminosarum bv. trifolii WSM1325 8014079 YP_002976975.1 CDS Rleg_3183 NC_012850.1 3184243 3185235 D PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0003391 myo-inositol 2-dehydrogenase protein; oxidoreductase domain-containing protein 3184243..3185235 Rhizobium leguminosarum bv. trifolii WSM1325 8014080 YP_002976976.1 CDS Rleg_3184 NC_012850.1 3185562 3186812 R PFAM: ROK family protein; KEGG: ret:RHE_CH03171 transcriptional regulator protein; ROK family protein complement(3185562..3186812) Rhizobium leguminosarum bv. trifolii WSM1325 8014081 YP_002976977.1 CDS Rleg_3185 NC_012850.1 3187040 3188080 D TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; KEGG: rec:RHECIAT_CH0003393 xylose ABC transporter, substrate-binding protein; D-xylose ABC transporter periplasmic substrate-binding protein 3187040..3188080 Rhizobium leguminosarum bv. trifolii WSM1325 8014082 YP_002976978.1 CDS Rleg_3186 NC_012850.1 3188347 3189660 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003394 xylose ABC transporter, permease protein; inner-membrane translocator 3188347..3189660 Rhizobium leguminosarum bv. trifolii WSM1325 8014083 YP_002976979.1 CDS Rleg_3187 NC_012850.1 3189675 3190457 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003395 xylose ABC transporter, ATP-binding protein; ABC transporter 3189675..3190457 Rhizobium leguminosarum bv. trifolii WSM1325 8015772 YP_002976980.1 CDS Rleg_3188 NC_012850.1 3190956 3191318 D KEGG: rec:RHECIAT_CH0003429 hypothetical protein; hypothetical protein 3190956..3191318 Rhizobium leguminosarum bv. trifolii WSM1325 8014085 YP_002976981.1 CDS Rleg_3189 NC_012850.1 3191782 3193158 D PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: ret:RHE_CH03184 hypothetical protein; hypothetical protein 3191782..3193158 Rhizobium leguminosarum bv. trifolii WSM1325 8014086 YP_002976982.1 CDS Rleg_3192 NC_012850.1 3193999 3194952 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: rec:RHECIAT_CH0003436 probable UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase 3193999..3194952 Rhizobium leguminosarum bv. trifolii WSM1325 8014089 YP_002976983.1 CDS Rleg_3193 NC_012850.1 3194987 3195181 D KEGG: rec:RHECIAT_CH0003437 probable glycosyltransferase protein; hypothetical protein 3194987..3195181 Rhizobium leguminosarum bv. trifolii WSM1325 8014090 YP_002976984.1 CDS Rleg_3194 NC_012850.1 3195314 3196681 R PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase complement(3195314..3196681) Rhizobium leguminosarum bv. trifolii WSM1325 8014091 YP_002976985.1 CDS Rleg_3195 NC_012850.1 3196674 3197858 R PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH03196 glycosyltransferase; family 2 glycosyl transferase complement(3196674..3197858) Rhizobium leguminosarum bv. trifolii WSM1325 8014092 YP_002976986.1 CDS Rleg_3196 NC_012850.1 3197858 3199159 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mrd:Mrad2831_4620 ABC transporter; ABC transporter complement(3197858..3199159) Rhizobium leguminosarum bv. trifolii WSM1325 8015773 YP_002976987.1 CDS Rleg_3197 NC_012850.1 3199156 3200004 R PFAM: ABC transporter; KEGG: mxa:MXAN_4623 O-antigen ABC exporter, permease protein; ABC transporter complement(3199156..3200004) Rhizobium leguminosarum bv. trifolii WSM1325 8014093 YP_002976988.1 CDS Rleg_3198 NC_012850.1 3200120 3203167 D PFAM: glycosyl transferase family 2; polysaccharide deacetylase; methyltransferase type 12; methyltransferase type 11; NodS family protein; KEGG: mlo:mll3280 hypothetical protein; family 2 glycosyl transferase 3200120..3203167 Rhizobium leguminosarum bv. trifolii WSM1325 8014094 YP_002976989.1 CDS Rleg_3199 NC_012850.1 3203156 3204205 R PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH03198 glycosyltransferase; family 2 glycosyl transferase complement(3203156..3204205) Rhizobium leguminosarum bv. trifolii WSM1325 8014095 YP_002976990.1 CDS Rleg_3202 NC_012850.1 3206275 3206481 D KEGG: rec:RHECIAT_CH0003443 hypothetical protein; hypothetical protein 3206275..3206481 Rhizobium leguminosarum bv. trifolii WSM1325 8014098 YP_002976991.1 CDS Rleg_3203 NC_012850.1 3206886 3207134 R KEGG: rec:RHECIAT_CH0003445 hypothetical protein; hypothetical protein complement(3206886..3207134) Rhizobium leguminosarum bv. trifolii WSM1325 8015774 YP_002976992.1 CDS Rleg_3204 NC_012850.1 3207238 3207945 R PFAM: TfuA domain protein core; KEGG: ret:RHE_CH03204 hypothetical protein; TfuA domain-containing protein core complement(3207238..3207945) Rhizobium leguminosarum bv. trifolii WSM1325 8014099 YP_002976993.1 CDS Rleg_3205 NC_012850.1 3207942 3209117 R PFAM: protein of unknown function DUF181; KEGG: ret:RHE_CH03205 hypothetical protein; hypothetical protein complement(3207942..3209117) Rhizobium leguminosarum bv. trifolii WSM1325 8014100 YP_002976994.1 CDS Rleg_3206 NC_012850.1 3209160 3209372 R KEGG: ret:RHE_CH03206 hypothetical protein; hypothetical protein complement(3209160..3209372) Rhizobium leguminosarum bv. trifolii WSM1325 8015775 YP_002976995.1 CDS Rleg_3207 NC_012850.1 3209393 3211240 R KEGG: ret:RHE_CH03207 hypothetical protein; SARP family transcriptional regulator complement(3209393..3211240) Rhizobium leguminosarum bv. trifolii WSM1325 8014101 YP_002976996.1 CDS Rleg_3208 NC_012850.1 3211250 3211675 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0003450 probable transcriptional regulator protein; XRE family transcriptional regulator complement(3211250..3211675) Rhizobium leguminosarum bv. trifolii WSM1325 8014102 YP_002976997.1 CDS Rleg_3209 NC_012850.1 3211847 3212539 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: ret:RHE_CH03209 methyltransferase protein; type 11 methyltransferase complement(3211847..3212539) Rhizobium leguminosarum bv. trifolii WSM1325 8014103 YP_002976998.1 CDS Rleg_3210 NC_012850.1 3212873 3213931 D KEGG: ret:RHE_CH03210 exopolysaccharide production protein; exopolysaccharide production protein 3212873..3213931 Rhizobium leguminosarum bv. trifolii WSM1325 8014104 YP_002976999.1 CDS Rleg_3211 NC_012850.1 3213963 3214337 R hypothetical protein complement(3213963..3214337) Rhizobium leguminosarum bv. trifolii WSM1325 8014105 YP_002977000.1 CDS Rleg_3212 NC_012850.1 3214544 3215617 D KEGG: ret:RHE_CH03212 endo-1,4-beta-xylanase protein; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10; endo-1,4-beta-xylanase 3214544..3215617 Rhizobium leguminosarum bv. trifolii WSM1325 8014106 YP_002977001.1 CDS Rleg_3213 NC_012850.1 3215649 3216800 D PFAM: glycosyl transferase group 1; KEGG: rec:RHECIAT_CH0003454 glycosyl transferase protein; group 1 glycosyl transferase 3215649..3216800 Rhizobium leguminosarum bv. trifolii WSM1325 8014107 YP_002977002.1 CDS Rleg_3214 NC_012850.1 3216800 3217306 D KEGG: ret:RHE_CH03214 acetyltransferase protein; acetyltransferase 3216800..3217306 Rhizobium leguminosarum bv. trifolii WSM1325 8014108 YP_002977003.1 CDS Rleg_3215 NC_012850.1 3217303 3218205 D PFAM: ExoV-like protein; KEGG: ret:RHE_CH03215 ketal pyruvate transferase protein; ExoV-like protein 3217303..3218205 Rhizobium leguminosarum bv. trifolii WSM1325 8014109 YP_002977004.1 CDS Rleg_3216 NC_012850.1 3218357 3219859 D PFAM: polysaccharide biosynthesis protein; KEGG: ret:RHE_CH03216 exopolysaccharide polymerization and/or export protein; polysaccharide biosynthesis protein 3218357..3219859 Rhizobium leguminosarum bv. trifolii WSM1325 8014110 YP_002977005.1 CDS Rleg_3217 NC_012850.1 3219891 3220895 D PFAM: polysaccharide pyruvyl transferase; KEGG: ret:RHE_CH03217 exopolysaccharide polymerization protein; polysaccharide pyruvyl transferase 3219891..3220895 Rhizobium leguminosarum bv. trifolii WSM1325 8015776 YP_002977006.1 CDS Rleg_3218 NC_012850.1 3220935 3221756 D KEGG: ret:RHE_CH03218 galactosyltransferase protein; galactosyltransferase protein 3220935..3221756 Rhizobium leguminosarum bv. trifolii WSM1325 8014111 YP_002977007.1 CDS Rleg_3219 NC_012850.1 3221838 3222782 D PFAM: glycosyl transferase family 2; KEGG: rec:RHECIAT_CH0003461 glycosyltransferase protein; family 2 glycosyl transferase 3221838..3222782 Rhizobium leguminosarum bv. trifolii WSM1325 8014112 YP_002977008.1 CDS Rleg_3220 NC_012850.1 3222807 3223691 D PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH03222 glycosyltransferase protein; family 2 glycosyl transferase 3222807..3223691 Rhizobium leguminosarum bv. trifolii WSM1325 8014113 YP_002977009.1 CDS Rleg_3221 NC_012850.1 3223688 3224668 D PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH03223 glycosyltransferase protein; family 2 glycosyl transferase 3223688..3224668 Rhizobium leguminosarum bv. trifolii WSM1325 8014114 YP_002977010.1 CDS Rleg_3222 NC_012850.1 3224879 3225337 D PFAM: oligosaccharide biosynthesis protein Alg14 like; KEGG: ret:RHE_CH03225 glucuronosyltransferase protein; oligosaccharide biosynthesis protein Alg14 like protein 3224879..3225337 Rhizobium leguminosarum bv. trifolii WSM1325 8014115 YP_002977011.1 CDS Rleg_3223 NC_012850.1 3225334 3225810 D PFAM: Glycosyltransferase 28 domain; KEGG: ret:RHE_CH03226 glucuronosyltransferase protein; glycosyl transferase family protein 3225334..3225810 Rhizobium leguminosarum bv. trifolii WSM1325 8014116 YP_002977012.1 CDS Rleg_3224 NC_012850.1 3225856 3226551 R PFAM: lipolytic protein G-D-S-L family; KEGG: ret:RHE_CH03227 acyl-CoA thioesterase/lipase protein; G-D-S-L family lipolytic protein complement(3225856..3226551) Rhizobium leguminosarum bv. trifolii WSM1325 8014117 YP_002977013.1 CDS Rleg_3225 NC_012850.1 3226695 3228002 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH03228 HlyD family protein secretion protein; HlyD family type I secretion membrane fusion protein complement(3226695..3228002) Rhizobium leguminosarum bv. trifolii WSM1325 8014118 YP_002977014.1 CDS Rleg_3226 NC_012850.1 3228018 3229784 R KEGG: ret:RHE_CH03229 protease/lipase ABC transporter, ATP-binding and permease protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; type I secretion system ATPase complement(3228018..3229784) Rhizobium leguminosarum bv. trifolii WSM1325 8014119 YP_002977015.1 CDS Rleg_3227 NC_012850.1 3230261 3231874 R SMART: carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; KEGG: ret:RHE_CH03230 polysaccharidase protein; carbohydrate-binding and sugar hydrolysis protein complement(3230261..3231874) Rhizobium leguminosarum bv. trifolii WSM1325 8014120 YP_002977016.1 CDS Rleg_3228 NC_012850.1 3232562 3233260 D KEGG: ret:RHE_CH03231 autoaggregation protein; autoaggregation protein 3232562..3233260 Rhizobium leguminosarum bv. trifolii WSM1325 8014121 YP_002977017.1 CDS Rleg_3229 NC_012850.1 3233408 3234112 R KEGG: ret:RHE_CH03232 hypothetical protein; hypothetical protein complement(3233408..3234112) Rhizobium leguminosarum bv. trifolii WSM1325 8015777 YP_002977018.1 CDS Rleg_3230 NC_012850.1 3234112 3236388 R TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: rec:RHECIAT_CH0003473 exopolysaccharide polymerization protein; exopolysaccharide transport family protein complement(3234112..3236388) Rhizobium leguminosarum bv. trifolii WSM1325 8014122 YP_002977019.1 CDS Rleg_3231 NC_012850.1 3236440 3237144 R KEGG: rec:RHECIAT_CH0003474 exopolysaccharide inner membrane protein; exopolysaccharide inner membrane protein complement(3236440..3237144) Rhizobium leguminosarum bv. trifolii WSM1325 8014123 YP_002977020.1 CDS Rleg_3232 NC_012850.1 3237223 3238491 R PFAM: polysaccharide export protein; KEGG: rec:RHECIAT_CH0003475 exopolysaccharide export protein; polysaccharide export protein complement(3237223..3238491) Rhizobium leguminosarum bv. trifolii WSM1325 8014124 YP_002977021.1 CDS Rleg_3233 NC_012850.1 3238724 3240148 R KEGG: rec:RHECIAT_CH0003476 endo-1,4-beta-xylanase protein (exopolysaccharide export); endo-1,4-beta-xylanase complement(3238724..3240148) Rhizobium leguminosarum bv. trifolii WSM1325 8014125 YP_002977022.1 CDS Rleg_3234 NC_012850.1 3240457 3241056 D PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: ret:RHE_CH03237 hypothetical protein; transglutaminase 3240457..3241056 Rhizobium leguminosarum bv. trifolii WSM1325 8015778 YP_002977023.1 CDS Rleg_3235 NC_012850.1 3241325 3242653 D KEGG: rec:RHECIAT_CH0003478 UDP-glucose 6-dehydrogenase protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 3241325..3242653 Rhizobium leguminosarum bv. trifolii WSM1325 8014126 YP_002977024.1 CDS Rleg_3236 NC_012850.1 3242768 3243550 R PFAM: metallophosphoesterase; KEGG: ret:RHE_CH03239 serine/threonine specific protein phosphatase protein; bis(5'-nucleosyl)-tetraphosphatase complement(3242768..3243550) Rhizobium leguminosarum bv. trifolii WSM1325 8014127 YP_002977025.1 CDS Rleg_3238 NC_012850.1 3244240 3244482 D KEGG: rec:RHECIAT_CH0003482 hypothetical protein; hypothetical protein 3244240..3244482 Rhizobium leguminosarum bv. trifolii WSM1325 8014129 YP_002977026.1 CDS Rleg_3239 NC_012850.1 3244584 3245189 R PFAM: phospholipase/carboxylesterase; KEGG: ret:RHE_CH03240 esterase/lipase/thioesterase protein; phospholipase/carboxylesterase complement(3244584..3245189) Rhizobium leguminosarum bv. trifolii WSM1325 8014130 YP_002977027.1 CDS Rleg_3240 NC_012850.1 3245201 3246133 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0003485 probable dioxygenase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3245201..3246133) Rhizobium leguminosarum bv. trifolii WSM1325 8014131 YP_002977028.1 CDS Rleg_3241 NC_012850.1 3246323 3247024 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(3246323..3247024) Rhizobium leguminosarum bv. trifolii WSM1325 8014132 YP_002977029.1 CDS Rleg_3242 NC_012850.1 3247261 3248685 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ret:RHE_CH03243 phosphomannomutase protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 3247261..3248685 Rhizobium leguminosarum bv. trifolii WSM1325 8014133 YP_002977030.1 CDS Rleg_3243 NC_012850.1 3248725 3250152 D KEGG: rec:RHECIAT_CH0003488 mannose-1-phosphate guanylyltransferase (GDP) protein; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3248725..3250152 Rhizobium leguminosarum bv. trifolii WSM1325 8014134 YP_002977031.1 CDS Rleg_3244 NC_012850.1 3250250 3250576 D KEGG: rec:RHECIAT_CH0003489 hypothetical protein; hypothetical protein 3250250..3250576 Rhizobium leguminosarum bv. trifolii WSM1325 8014135 YP_002977032.1 CDS Rleg_3245 NC_012850.1 3250614 3251570 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: ret:RHE_CH03246 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase complement(3250614..3251570) Rhizobium leguminosarum bv. trifolii WSM1325 8014136 YP_002977033.1 CDS Rleg_3246 NC_012850.1 3251852 3252868 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0003491 UDP-glucuronic acid epimerase protein; NAD-dependent epimerase/dehydratase 3251852..3252868 Rhizobium leguminosarum bv. trifolii WSM1325 8015779 YP_002977034.1 CDS Rleg_3247 NC_012850.1 3252914 3253228 R KEGG: rec:RHECIAT_CH0003492 hypothetical protein; hypothetical protein complement(3252914..3253228) Rhizobium leguminosarum bv. trifolii WSM1325 8014137 YP_002977035.1 CDS Rleg_3248 NC_012850.1 3253482 3253634 R KEGG: rec:RHECIAT_CH0003493 hypothetical protein; hypothetical protein complement(3253482..3253634) Rhizobium leguminosarum bv. trifolii WSM1325 8014138 YP_002977036.1 CDS Rleg_3249 NC_012850.1 3254072 3254773 D PFAM: transcriptional regulator TetR ; regulatory protein TetR; KEGG: rec:RHECIAT_CH0003494 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 3254072..3254773 Rhizobium leguminosarum bv. trifolii WSM1325 8014139 YP_002977037.1 CDS Rleg_3250 NC_012850.1 3254770 3255783 D PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH03250 hypothetical protein; hypothetical protein 3254770..3255783 Rhizobium leguminosarum bv. trifolii WSM1325 8014140 YP_002977038.1 CDS Rleg_3251 NC_012850.1 3255780 3257525 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003496 probable ABC transporter, ATP-binding protein; ABC transporter 3255780..3257525 Rhizobium leguminosarum bv. trifolii WSM1325 8014141 YP_002977039.1 CDS Rleg_3252 NC_012850.1 3257522 3258649 D PFAM: ABC transporter; KEGG: rec:RHECIAT_CH0003497 probable ABC transporter, permease protein; ABC transporter 3257522..3258649 Rhizobium leguminosarum bv. trifolii WSM1325 8014142 YP_002977040.1 CDS Rleg_3253 NC_012850.1 3258651 3259760 D PFAM: ABC transporter; KEGG: ret:RHE_CH03253 ABC transporter permease; ABC transporter 3258651..3259760 Rhizobium leguminosarum bv. trifolii WSM1325 8014143 YP_002977041.1 CDS Rleg_3254 NC_012850.1 3259891 3260286 D PFAM: protein of unknown function DUF1236; KEGG: rec:RHECIAT_CH0003499 hypothetical protein; hypothetical protein 3259891..3260286 Rhizobium leguminosarum bv. trifolii WSM1325 8014144 YP_002977042.1 CDS Rleg_3255 NC_012850.1 3260287 3260499 R hypothetical protein complement(3260287..3260499) Rhizobium leguminosarum bv. trifolii WSM1325 8014145 YP_002977043.1 CDS Rleg_3257 NC_012850.1 3262235 3263278 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH03255 myo-inositol 2-dehydrogenase protein; oxidoreductase domain-containing protein complement(3262235..3263278) Rhizobium leguminosarum bv. trifolii WSM1325 8015780 YP_002977044.1 CDS Rleg_3258 NC_012850.1 3263288 3264073 R PFAM: protein of unknown function DUF1037; KEGG: ret:RHE_CH03256 trehalosemaltose utilization protein; hypothetical protein complement(3263288..3264073) Rhizobium leguminosarum bv. trifolii WSM1325 8014147 YP_002977045.1 CDS Rleg_3259 NC_012850.1 3264265 3264606 R PFAM: small multidrug resistance protein; KEGG: rec:RHECIAT_CH0003503 methyl viologen/ethidium resistance protein; small multidrug resistance protein complement(3264265..3264606) Rhizobium leguminosarum bv. trifolii WSM1325 8014148 YP_002977046.1 CDS Rleg_3260 NC_012850.1 3264625 3265188 R PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0003504 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(3264625..3265188) Rhizobium leguminosarum bv. trifolii WSM1325 8014149 YP_002977047.1 CDS Rleg_3261 NC_012850.1 3265357 3265767 D PFAM: globin; KEGG: rec:RHECIAT_CH0003505 globin family protein; globin 3265357..3265767 Rhizobium leguminosarum bv. trifolii WSM1325 8014150 YP_002977048.1 CDS Rleg_3262 NC_012850.1 3265764 3266135 D PFAM: protein of unknown function DUF423; KEGG: rec:RHECIAT_CH0003506 hypothetical protein; hypothetical protein 3265764..3266135 Rhizobium leguminosarum bv. trifolii WSM1325 8014151 YP_002977049.1 CDS Rleg_3263 NC_012850.1 3266474 3266788 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rec:RHECIAT_CH0003507 antibiotic biosynthesis monooxygenase protein; antibiotic biosynthesis monooxygenase complement(3266474..3266788) Rhizobium leguminosarum bv. trifolii WSM1325 8014152 YP_002977050.1 CDS Rleg_3264 NC_012850.1 3266798 3267070 R KEGG: rec:RHECIAT_CH0003508 hypothetical protein; hypothetical protein complement(3266798..3267070) Rhizobium leguminosarum bv. trifolii WSM1325 8014153 YP_002977051.1 CDS Rleg_3265 NC_012850.1 3267067 3267474 R KEGG: ret:RHE_CH03264 hypothetical protein; hypothetical protein complement(3267067..3267474) Rhizobium leguminosarum bv. trifolii WSM1325 8014154 YP_002977052.1 CDS Rleg_3266 NC_012850.1 3267585 3268940 R TIGRFAM: TonB family protein; KEGG: ret:RHE_CH03265 membrane protein, transduces energy to outer membrane receptors; TonB family protein complement(3267585..3268940) Rhizobium leguminosarum bv. trifolii WSM1325 8014155 YP_002977053.1 CDS Rleg_3267 NC_012850.1 3269098 3269520 R KEGG: rec:RHECIAT_CH0003511 hypothetical protein; hypothetical protein complement(3269098..3269520) Rhizobium leguminosarum bv. trifolii WSM1325 8014156 YP_002977054.1 CDS Rleg_3268 NC_012850.1 3269697 3269879 D KEGG: ret:RHE_CH03267 hemin transport system, hemin uptake protein; hemin transport system, hemin uptake protein 3269697..3269879 Rhizobium leguminosarum bv. trifolii WSM1325 8014157 YP_002977055.1 CDS Rleg_3269 NC_012850.1 3269888 3270937 D PFAM: Haemin-degrading family protein; KEGG: rec:RHECIAT_CH0003513 hemin transport system, degrading protein; Hemin-degrading family protein 3269888..3270937 Rhizobium leguminosarum bv. trifolii WSM1325 8015781 YP_002977056.1 CDS Rleg_3270 NC_012850.1 3270949 3271878 D PFAM: periplasmic binding protein; KEGG: rec:RHECIAT_CH0003514 hemin transport system, hemin-binding protein; periplasmic binding protein 3270949..3271878 Rhizobium leguminosarum bv. trifolii WSM1325 8014158 YP_002977057.1 CDS Rleg_3271 NC_012850.1 3271881 3272993 D PFAM: transport system permease protein; KEGG: ret:RHE_CH03270 hemin transport system, permease protein; ABC transporter permease 3271881..3272993 Rhizobium leguminosarum bv. trifolii WSM1325 8014159 YP_002977058.1 CDS hmuV NC_012850.1 3273030 3273824 D with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 3273030..3273824 Rhizobium leguminosarum bv. trifolii WSM1325 8014160 YP_002977059.1 CDS Rleg_3273 NC_012850.1 3273972 3274316 D PFAM: protein of unknown function DUF883 ElaB; KEGG: ret:RHE_CH03272 hypothetical protein; hypothetical protein 3273972..3274316 Rhizobium leguminosarum bv. trifolii WSM1325 8014161 YP_002977060.1 CDS Rleg_3274 NC_012850.1 3274326 3274727 D KEGG: rec:RHECIAT_CH0003518 hypothetical protein; hypothetical protein 3274326..3274727 Rhizobium leguminosarum bv. trifolii WSM1325 8014162 YP_002977061.1 CDS Rleg_3275 NC_012850.1 3274828 3275946 D PFAM: transposase IS4 family protein; KEGG: ecd:ECDH10B_2558 IS186/IS421 transposase; transposase IS4 family protein 3274828..3275946 Rhizobium leguminosarum bv. trifolii WSM1325 8014163 YP_002977062.1 CDS Rleg_3276 NC_012850.1 3276369 3276926 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(3276369..3276926) Rhizobium leguminosarum bv. trifolii WSM1325 8014164 YP_002977063.1 CDS Rleg_3277 NC_012850.1 3276936 3277214 R KEGG: rec:RHECIAT_CH0003520 hypothetical protein; hypothetical protein complement(3276936..3277214) Rhizobium leguminosarum bv. trifolii WSM1325 8014165 YP_002977064.1 CDS Rleg_3278 NC_012850.1 3277400 3278194 D in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3277400..3278194 Rhizobium leguminosarum bv. trifolii WSM1325 8014166 YP_002977065.1 CDS Rleg_3279 NC_012850.1 3278370 3279383 D PFAM: HWE histidine kinase; KEGG: ret:RHE_CH03276 two-component sensor histidine kinase protein; signal transduction histidine kinase 3278370..3279383 Rhizobium leguminosarum bv. trifolii WSM1325 8015782 YP_002977066.1 CDS Rleg_3280 NC_012850.1 3279792 3281153 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 3279792..3281153 Rhizobium leguminosarum bv. trifolii WSM1325 8014167 YP_002977067.1 CDS Rleg_3281 NC_012850.1 3281169 3282482 D catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 3281169..3282482 Rhizobium leguminosarum bv. trifolii WSM1325 8014168 YP_002977068.1 CDS Rleg_3282 NC_012850.1 3282590 3283204 R TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor; KEGG: bra:BRADO6515 class I peptide chain release factor domain-containing protein; peptide chain release factor H complement(3282590..3283204) Rhizobium leguminosarum bv. trifolii WSM1325 8014169 YP_002977069.1 CDS Rleg_3283 NC_012850.1 3283191 3284414 R TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; KEGG: bbt:BBta_1125 hypothetical protein; release factor H-coupled RctB family protein complement(3283191..3284414) Rhizobium leguminosarum bv. trifolii WSM1325 8015783 YP_002977070.1 CDS ftrA NC_012850.1 3284613 3285614 R upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; FtrA family transcriptional regulator complement(3284613..3285614) Rhizobium leguminosarum bv. trifolii WSM1325 8014170 YP_002977071.1 CDS Rleg_3285 NC_012850.1 3285682 3286092 D PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: rec:RHECIAT_CH0003527 rhodanese-related sulfurtransferase protein; rhodanese domain-containing protein 3285682..3286092 Rhizobium leguminosarum bv. trifolii WSM1325 8014171 YP_002977072.1 CDS Rleg_3286 NC_012850.1 3286150 3287172 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_CH0003528 probable alcohol dehydrogenase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(3286150..3287172) Rhizobium leguminosarum bv. trifolii WSM1325 8015784 YP_002977073.1 CDS Rleg_3287 NC_012850.1 3287274 3288173 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH03286 LysR family transcriptional regulator; LysR family transcriptional regulator 3287274..3288173 Rhizobium leguminosarum bv. trifolii WSM1325 8014172 YP_002977074.1 CDS Rleg_3288 NC_012850.1 3288312 3288848 D PFAM: Haem oxygenase-like; KEGG: rec:RHECIAT_CH0003530 heme oxygenase protein; Heme oxygenase-like protein 3288312..3288848 Rhizobium leguminosarum bv. trifolii WSM1325 8014173 YP_002977075.1 CDS Rleg_3289 NC_012850.1 3288845 3291412 D PFAM: PAS fold-2 domain protein; Phytochrome central region domain protein; HWE histidine kinase; response regulator receiver; GAF domain protein; SMART: GAF domain protein; response regulator receiver; KEGG: rec:RHECIAT_CH0003531 phytochrome protein; PAS/PAC sensor protein 3288845..3291412 Rhizobium leguminosarum bv. trifolii WSM1325 8014174 YP_002977076.1 CDS Rleg_3290 NC_012850.1 3291418 3292095 R PFAM: tetracycline transcriptional regulator YcdC domain protein; regulatory protein TetR; KEGG: rec:RHECIAT_CH0003532 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(3291418..3292095) Rhizobium leguminosarum bv. trifolii WSM1325 8014175 YP_002977077.1 CDS Rleg_3291 NC_012850.1 3292371 3293624 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 3292371..3293624 Rhizobium leguminosarum bv. trifolii WSM1325 8014176 YP_002977078.1 CDS Rleg_3292 NC_012850.1 3293621 3293965 D PFAM: Barstar (barnase inhibitor); KEGG: bac:BamMC406_3430 hypothetical protein; barnase inhibitor 3293621..3293965 Rhizobium leguminosarum bv. trifolii WSM1325 8014177 YP_002977079.1 CDS Rleg_3293 NC_012850.1 3293976 3295430 D catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 3293976..3295430 Rhizobium leguminosarum bv. trifolii WSM1325 8014178 YP_002977080.1 CDS Rleg_3294 NC_012850.1 3295489 3295902 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: rec:RHECIAT_CH0003536 hypothetical protein; cupin complement(3295489..3295902) Rhizobium leguminosarum bv. trifolii WSM1325 8014179 YP_002977081.1 CDS Rleg_3295 NC_012850.1 3295997 3296773 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03294 nitrate/sulfonate ABC transporter, ATP-binding protein; ABC transporter 3295997..3296773 Rhizobium leguminosarum bv. trifolii WSM1325 8014180 YP_002977082.1 CDS Rleg_3296 NC_012850.1 3297015 3297944 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003538 probable nitrate/sulfonate ABC transporter, permease protein; ABC transporter permease 3297015..3297944 Rhizobium leguminosarum bv. trifolii WSM1325 8014181 YP_002977083.1 CDS Rleg_3297 NC_012850.1 3297941 3299068 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003539 probable nitrate/sulfonate ABC transporter, permease protein; ABC transporter permease 3297941..3299068 Rhizobium leguminosarum bv. trifolii WSM1325 8014182 YP_002977084.1 CDS Rleg_3298 NC_012850.1 3299127 3300098 D PFAM: NMT1/THI5 like domain protein; KEGG: rec:RHECIAT_CH0003540 probable nitrate/sulfonate ABC transporter, substrate-binding protein; NMT1/THI5 like domain-containing protein 3299127..3300098 Rhizobium leguminosarum bv. trifolii WSM1325 8014183 YP_002977085.1 CDS Rleg_3299 NC_012850.1 3300604 3301794 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH03298 HlyD family protein secretion protein; RND family efflux transporter MFP subunit 3300604..3301794 Rhizobium leguminosarum bv. trifolii WSM1325 8014184 YP_002977086.1 CDS Rleg_3300 NC_012850.1 3301807 3305133 D PFAM: acriflavin resistance protein; KEGG: rec:RHECIAT_CH0003542 probable acriflavin resistance protein (transporter protein); acriflavin resistance protein 3301807..3305133 Rhizobium leguminosarum bv. trifolii WSM1325 8014185 YP_002977087.1 CDS Rleg_3301 NC_012850.1 3305299 3305982 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: regulator of biofilm formation Fnr family; Crp/Fnr family transcriptional regulator 3305299..3305982 Rhizobium leguminosarum bv. trifolii WSM1325 8014186 YP_002977088.1 CDS Rleg_3302 NC_012850.1 3306103 3306714 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: ret:RHE_CH03300 urease accessory protein; urease accessory protein UreG complement(3306103..3306714) Rhizobium leguminosarum bv. trifolii WSM1325 8014187 YP_002977089.1 CDS Rleg_3303 NC_012850.1 3306912 3307583 R PFAM: urease accessory protein UreF; KEGG: ret:RHE_CH03301 urease accessory protein; urease accessory protein UreF complement(3306912..3307583) Rhizobium leguminosarum bv. trifolii WSM1325 8014188 YP_002977090.1 CDS Rleg_3304 NC_012850.1 3307590 3308174 R PFAM: UreE urease accessory domain protein; KEGG: rec:RHECIAT_CH0003545 urease accessory protein; UreE urease accessory domain-containing protein complement(3307590..3308174) Rhizobium leguminosarum bv. trifolii WSM1325 8014189 YP_002977091.1 CDS Rleg_3305 NC_012850.1 3308261 3309121 R KEGG: rec:RHECIAT_CH0003546 probable urease-associated protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3308261..3309121) Rhizobium leguminosarum bv. trifolii WSM1325 8015785 YP_002977092.1 CDS Rleg_3306 NC_012850.1 3309453 3310124 R KEGG: rec:RHECIAT_CH0003547 probable urease-associated protein; urease-associated protein complement(3309453..3310124) Rhizobium leguminosarum bv. trifolii WSM1325 8014190 YP_002977093.1 CDS ureC NC_012850.1 3310156 3311868 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(3310156..3311868) Rhizobium leguminosarum bv. trifolii WSM1325 8014191 YP_002977094.1 CDS Rleg_3308 NC_012850.1 3311872 3312495 R KEGG: ret:RHE_CH03306 urease-associated protein; urease-associated protein complement(3311872..3312495) Rhizobium leguminosarum bv. trifolii WSM1325 8014192 YP_002977095.1 CDS Rleg_3309 NC_012850.1 3312512 3312919 R PFAM: protein of unknown function DUF1311; KEGG: rec:RHECIAT_CH0003550 probable urease-associated protein; hypothetical protein complement(3312512..3312919) Rhizobium leguminosarum bv. trifolii WSM1325 8014193 YP_002977096.1 CDS ureB NC_012850.1 3312942 3313247 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta complement(3312942..3313247) Rhizobium leguminosarum bv. trifolii WSM1325 8014194 YP_002977097.1 CDS Rleg_3311 NC_012850.1 3313258 3313509 R PFAM: protein of unknown function DUF1272; KEGG: ret:RHE_CH03309 urease-associated protein; SNP /replace=C; hypothetical protein complement(3313258..3313509) Rhizobium leguminosarum bv. trifolii WSM1325 8014195 YP_002977098.1 CDS ureA NC_012850.1 3313520 3313822 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(3313520..3313822) Rhizobium leguminosarum bv. trifolii WSM1325 8014196 YP_002977099.1 CDS Rleg_3313 NC_012850.1 3313856 3314677 R PFAM: urease accessory protein UreD; KEGG: ureD; urease accessory protein ; K03190 urease accessory protein; urease accessory protein UreD complement(3313856..3314677) Rhizobium leguminosarum bv. trifolii WSM1325 8014197 YP_002977100.1 CDS Rleg_3314 NC_012850.1 3314829 3315524 R KEGG: rec:RHECIAT_CH0003555 ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE complement(3314829..3315524) Rhizobium leguminosarum bv. trifolii WSM1325 8014198 YP_002977101.1 CDS Rleg_3315 NC_012850.1 3315749 3316504 R KEGG: rec:RHECIAT_CH0003557 probable UreA or short-chain amide ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter; SMART: AAA ATPase; urea ABC transporter ATP-binding protein complement(3315749..3316504) Rhizobium leguminosarum bv. trifolii WSM1325 8014199 YP_002977102.1 CDS Rleg_3316 NC_012850.1 3316510 3317673 R TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003558 probable UreA or short-chain amide ABC transporter, permease protein; urea ABC transporter permease complement(3316510..3317673) Rhizobium leguminosarum bv. trifolii WSM1325 8014200 YP_002977103.1 CDS Rleg_3317 NC_012850.1 3317670 3319307 R TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003559 probable UreA or short-chain amide ABC transporter, permease protein; urea ABC transporter permease complement(3317670..3319307) Rhizobium leguminosarum bv. trifolii WSM1325 8014201 YP_002977104.1 CDS Rleg_3318 NC_012850.1 3319423 3320715 R TIGRFAM: urea ABC transporter, urea binding protein; KEGG: ret:RHE_CH03317 UreA or short-chain amide ABC transporter, substrate-binding protein; urea ABC transporter substrate-binding protein complement(3319423..3320715) Rhizobium leguminosarum bv. trifolii WSM1325 8014202 YP_002977105.1 CDS Rleg_3319 NC_012850.1 3320902 3322806 R KEGG: rec:RHECIAT_CH0003561 phosphatase protein; TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; autotransporter-associated beta strand repeat-containing protein complement(3320902..3322806) Rhizobium leguminosarum bv. trifolii WSM1325 8014203 YP_002977106.1 CDS Rleg_3320 NC_012850.1 3322985 3326371 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: rec:RHECIAT_CH0003562 probable two-component sensor histidine kinase protein; histidine kinase 3322985..3326371 Rhizobium leguminosarum bv. trifolii WSM1325 8014204 YP_002977107.1 CDS Rleg_3321 NC_012850.1 3326364 3327281 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rec:RHECIAT_CH0003563 probable two-component response regulator protein; LuxR family transcriptional regulator 3326364..3327281 Rhizobium leguminosarum bv. trifolii WSM1325 8014205 YP_002977108.1 CDS Rleg_3322 NC_012850.1 3327416 3328387 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sme:SMc01943 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit complement(3327416..3328387) Rhizobium leguminosarum bv. trifolii WSM1325 8014206 YP_002977109.1 CDS Rleg_3323 NC_012850.1 3328523 3329644 R PFAM: Extracellular ligand-binding receptor; KEGG: ret:RHE_CH03321 amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor complement(3328523..3329644) Rhizobium leguminosarum bv. trifolii WSM1325 8014207 YP_002977110.1 CDS Rleg_3324 NC_012850.1 3329765 3330118 R KEGG: ret:RHE_CH03322 hypothetical protein; hypothetical protein complement(3329765..3330118) Rhizobium leguminosarum bv. trifolii WSM1325 8014208 YP_002977111.1 CDS Rleg_3325 NC_012850.1 3330138 3330881 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003566 amino acid ABC transporter, ATP-binding protein; ABC transporter complement(3330138..3330881) Rhizobium leguminosarum bv. trifolii WSM1325 8014209 YP_002977112.1 CDS Rleg_3326 NC_012850.1 3330881 3331756 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003567 amino acid ABC transporter, ATP-binding protein; ABC transporter complement(3330881..3331756) Rhizobium leguminosarum bv. trifolii WSM1325 8015786 YP_002977113.1 CDS Rleg_3327 NC_012850.1 3331756 3333147 R PFAM: inner-membrane translocator; KEGG: ret:RHE_CH03325 amino acid ABC transporter, permease protein; inner-membrane translocator complement(3331756..3333147) Rhizobium leguminosarum bv. trifolii WSM1325 8014210 YP_002977114.1 CDS Rleg_3328 NC_012850.1 3333152 3334054 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003569 amino acid ABC transporter, permease protein; inner-membrane translocator complement(3333152..3334054) Rhizobium leguminosarum bv. trifolii WSM1325 8014211 YP_002977115.1 CDS Rleg_3329 NC_012850.1 3334598 3335395 D TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: rec:RHECIAT_CH0003571 exopolysaccharide production protein; 3'(2'),5'-bisphosphate nucleotidase 3334598..3335395 Rhizobium leguminosarum bv. trifolii WSM1325 8014212 YP_002977116.1 CDS Rleg_3330 NC_012850.1 3336000 3336764 D PFAM: sugar transferase; KEGG: rec:RHECIAT_CH0003572 exopolysaccharide production CDP-diacylglycerol-serine O-phosphatidyltransferase protein; sugar transferase 3336000..3336764 Rhizobium leguminosarum bv. trifolii WSM1325 8014213 YP_002977117.1 CDS Rleg_3331 NC_012850.1 3336972 3337709 R KEGG: ret:RHE_CH03329 hypothetical protein; hypothetical protein complement(3336972..3337709) Rhizobium leguminosarum bv. trifolii WSM1325 8014214 YP_002977118.1 CDS Rleg_3332 NC_012850.1 3338109 3338384 D PFAM: protein of unknown function DUF1153; KEGG: ret:RHE_CH03330 hypothetical protein; hypothetical protein 3338109..3338384 Rhizobium leguminosarum bv. trifolii WSM1325 8014215 YP_002977119.1 CDS Rleg_3333 NC_012850.1 3338408 3338896 R KEGG: ret:RHE_CH03331 hypothetical protein; hypothetical protein complement(3338408..3338896) Rhizobium leguminosarum bv. trifolii WSM1325 8014216 YP_002977120.1 CDS Rleg_3334 NC_012850.1 3339030 3339308 D KEGG: ret:RHE_CH03332 acetyltransferase protein; acetyltransferase 3339030..3339308 Rhizobium leguminosarum bv. trifolii WSM1325 8014217 YP_002977121.1 CDS Rleg_3335 NC_012850.1 3339513 3339863 R KEGG: rec:RHECIAT_CH0003577 hypothetical protein; hypothetical protein complement(3339513..3339863) Rhizobium leguminosarum bv. trifolii WSM1325 8014218 YP_002977122.1 CDS Rleg_3336 NC_012850.1 3340300 3341001 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0003578 two-component response regulator protein controls chromosomal replication initiation; transcriptional regulator 3340300..3341001 Rhizobium leguminosarum bv. trifolii WSM1325 8014219 YP_002977123.1 CDS Rleg_3337 NC_012850.1 3341337 3341699 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ret:RHE_CH03335 two-component response regulator protein; response regulator receiver protein complement(3341337..3341699) Rhizobium leguminosarum bv. trifolii WSM1325 8014220 YP_002977124.1 CDS Rleg_3338 NC_012850.1 3341821 3342468 R KEGG: ret:RHE_CH03336 hypothetical protein; hypothetical protein complement(3341821..3342468) Rhizobium leguminosarum bv. trifolii WSM1325 8015787 YP_002977125.1 CDS Rleg_3339 NC_012850.1 3342663 3343250 D PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0003581 hypothetical protein; hypothetical protein 3342663..3343250 Rhizobium leguminosarum bv. trifolii WSM1325 8014221 YP_002977126.1 CDS Rleg_3340 NC_012850.1 3343367 3344533 D KEGG: ret:RHE_CH03338 hypothetical protein; hypothetical protein 3343367..3344533 Rhizobium leguminosarum bv. trifolii WSM1325 8014222 YP_002977127.1 CDS Rleg_3341 NC_012850.1 3344604 3345428 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ret:RHE_CH03339 RNA methylase protein; tRNA/rRNA methyltransferase SpoU complement(3344604..3345428) Rhizobium leguminosarum bv. trifolii WSM1325 8014223 YP_002977128.1 CDS Rleg_3342 NC_012850.1 3345436 3345822 R KEGG: rec:RHECIAT_CH0003584 hypothetical protein; hypothetical protein complement(3345436..3345822) Rhizobium leguminosarum bv. trifolii WSM1325 8014224 YP_002977129.1 CDS Rleg_3343 NC_012850.1 3345866 3346891 D KEGG: ret:RHE_CH03341 pseudouridylate synthase, ribosomal large subunit D protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 3345866..3346891 Rhizobium leguminosarum bv. trifolii WSM1325 8014225 YP_002977130.1 CDS Rleg_3344 NC_012850.1 3347081 3347989 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 3347081..3347989 Rhizobium leguminosarum bv. trifolii WSM1325 8014226 YP_002977131.1 CDS Rleg_3345 NC_012850.1 3348113 3350638 R KEGG: rec:RHECIAT_CH0003587 hypothetical protein; hypothetical protein complement(3348113..3350638) Rhizobium leguminosarum bv. trifolii WSM1325 8014227 YP_002977132.1 CDS Rleg_3346 NC_012850.1 3350699 3351997 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(3350699..3351997) Rhizobium leguminosarum bv. trifolii WSM1325 8014228 YP_002977133.1 CDS Rleg_3347 NC_012850.1 3352191 3353108 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_CH0003589 hypothetical conserved membrane protein; hypothetical protein 3352191..3353108 Rhizobium leguminosarum bv. trifolii WSM1325 8014229 YP_002977134.1 CDS Rleg_3348 NC_012850.1 3353133 3353981 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003590 acetyltransferase protein; SNP /replace=A; N-acetyltransferase GCN5 complement(3353133..3353981) Rhizobium leguminosarum bv. trifolii WSM1325 8014230 YP_002977135.1 CDS Rleg_3349 NC_012850.1 3354350 3356167 R KEGG: rec:RHECIAT_CH0003591 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(3354350..3356167) Rhizobium leguminosarum bv. trifolii WSM1325 8014231 YP_002977136.1 CDS Rleg_3350 NC_012850.1 3356299 3358083 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(3356299..3358083) Rhizobium leguminosarum bv. trifolii WSM1325 8014232 YP_002977137.1 CDS Rleg_3351 NC_012850.1 3358080 3358991 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: 6-phosphogluconatedehydrogenase protein ; K00042 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase complement(3358080..3358991) Rhizobium leguminosarum bv. trifolii WSM1325 8014233 YP_002977138.1 CDS Rleg_3352 NC_012850.1 3359198 3362398 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rec:RHECIAT_CH0003593 multidrug-efflux system, acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3359198..3362398) Rhizobium leguminosarum bv. trifolii WSM1325 8014234 YP_002977139.1 CDS Rleg_3353 NC_012850.1 3362517 3363707 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0003594 multidrug-efflux system secretion protein, HlyD family; RND family efflux transporter MFP subunit complement(3362517..3363707) Rhizobium leguminosarum bv. trifolii WSM1325 8014235 YP_002977140.1 CDS Rleg_3354 NC_012850.1 3363754 3364566 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rec:RHECIAT_CH0003595 esterase protein; Alpha/beta hydrolase fold-3 domain-containing protein complement(3363754..3364566) Rhizobium leguminosarum bv. trifolii WSM1325 8014236 YP_002977141.1 CDS Rleg_3355 NC_012850.1 3364731 3365642 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003596 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 3364731..3365642 Rhizobium leguminosarum bv. trifolii WSM1325 8015788 YP_002977142.1 CDS Rleg_3356 NC_012850.1 3365927 3366829 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: short-chain oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(3365927..3366829) Rhizobium leguminosarum bv. trifolii WSM1325 8015789 YP_002977143.1 CDS Rleg_3357 NC_012850.1 3366910 3367653 R member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase complement(3366910..3367653) Rhizobium leguminosarum bv. trifolii WSM1325 8014237 YP_002977144.1 CDS Rleg_3358 NC_012850.1 3367773 3368681 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003598 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 3367773..3368681 Rhizobium leguminosarum bv. trifolii WSM1325 8014238 YP_002977145.1 CDS Rleg_3359 NC_012850.1 3368721 3369035 D KEGG: ret:RHE_CH03354 hypothetical protein; hypothetical protein 3368721..3369035 Rhizobium leguminosarum bv. trifolii WSM1325 8014239 YP_002977146.1 CDS Rleg_3360 NC_012850.1 3369089 3369706 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 3369089..3369706 Rhizobium leguminosarum bv. trifolii WSM1325 8014240 YP_002977147.1 CDS Rleg_3361 NC_012850.1 3369830 3371371 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH03356 multidrug resistance protein; EmrB/QacA subfamily drug resistance transporter complement(3369830..3371371) Rhizobium leguminosarum bv. trifolii WSM1325 8014241 YP_002977148.1 CDS Rleg_3362 NC_012850.1 3371364 3372605 R PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0003602 probable protein secretion protein, HlyD family; secretion protein HlyD family protein complement(3371364..3372605) Rhizobium leguminosarum bv. trifolii WSM1325 8014242 YP_002977149.1 CDS Rleg_3363 NC_012850.1 3372598 3373062 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_CH03358 MarR family transcriptional regulator; MarR family transcriptional regulator complement(3372598..3373062) Rhizobium leguminosarum bv. trifolii WSM1325 8014243 YP_002977150.1 CDS Rleg_3364 NC_012850.1 3373307 3374851 D PFAM: sodium/hydrogen exchanger; KEGG: rec:RHECIAT_CH0003604 probable Na+/H+ antiporter protein; sodium/hydrogen exchanger 3373307..3374851 Rhizobium leguminosarum bv. trifolii WSM1325 8014244 YP_002977151.1 CDS Rleg_3365 NC_012850.1 3375114 3376289 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH03360 HlyD family multidrug-efflux system secretion protein; RND family efflux transporter MFP subunit 3375114..3376289 Rhizobium leguminosarum bv. trifolii WSM1325 8014245 YP_002977152.1 CDS Rleg_3366 NC_012850.1 3376286 3379474 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rec:RHECIAT_CH0003606 multidrug-efflux system, acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3376286..3379474 Rhizobium leguminosarum bv. trifolii WSM1325 8014246 YP_002977153.1 CDS Rleg_3367 NC_012850.1 3379577 3380314 R PFAM: metallophosphoesterase; KEGG: ret:RHE_CH03362 serine/threonine specific protein phosphatase protein; metallophosphoesterase complement(3379577..3380314) Rhizobium leguminosarum bv. trifolii WSM1325 8014247 YP_002977154.1 CDS Rleg_3368 NC_012850.1 3380517 3381644 D PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase; KEGG: ret:RHE_CH03363 FMNH2-dependent monooxygenase protein; acyl-CoA dehydrogenase type 2 domain protein 3380517..3381644 Rhizobium leguminosarum bv. trifolii WSM1325 8014248 YP_002977155.1 CDS Rleg_3369 NC_012850.1 3381645 3382109 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rec:RHECIAT_CH0003609 transcriptional regulator protein; BadM/Rrf2 transcriptional regulator complement(3381645..3382109) Rhizobium leguminosarum bv. trifolii WSM1325 8014249 YP_002977156.1 CDS Rleg_3370 NC_012850.1 3382286 3383074 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_CH0003610 3-oxoacyl-[acyl-carrier-protein] reductase protein; short-chain dehydrogenase/reductase SDR complement(3382286..3383074) Rhizobium leguminosarum bv. trifolii WSM1325 8014250 YP_002977157.1 CDS Rleg_3371 NC_012850.1 3383217 3383987 D PFAM: xylose isomerase; KEGG: ret:RHE_CH03366 hydroxypyruvate isomerase protein; Hydroxypyruvate isomerase 3383217..3383987 Rhizobium leguminosarum bv. trifolii WSM1325 8014251 YP_002977158.1 CDS Rleg_3372 NC_012850.1 3383984 3385003 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: smd:Smed_5554 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator complement(3383984..3385003) Rhizobium leguminosarum bv. trifolii WSM1325 8014252 YP_002977159.1 CDS Rleg_3373 NC_012850.1 3385184 3387109 D PFAM: extracellular solute-binding protein family 5; KEGG: smd:Smed_5555 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 3385184..3387109 Rhizobium leguminosarum bv. trifolii WSM1325 8014253 YP_002977160.1 CDS Rleg_3374 NC_012850.1 3387197 3389305 D PFAM: protein of unknown function DUF187; KEGG: smd:Smed_5556 protein of unknown function DUF187; hypothetical protein 3387197..3389305 Rhizobium leguminosarum bv. trifolii WSM1325 8014254 YP_002977161.1 CDS Rleg_3375 NC_012850.1 3389410 3390396 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_5557 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 3389410..3390396 Rhizobium leguminosarum bv. trifolii WSM1325 8014255 YP_002977162.1 CDS Rleg_3376 NC_012850.1 3390407 3391597 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_5558 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 3390407..3391597 Rhizobium leguminosarum bv. trifolii WSM1325 8014256 YP_002977163.1 CDS Rleg_3377 NC_012850.1 3391608 3393335 D PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; KEGG: smd:Smed_5559 ABC transporter; ABC transporter 3391608..3393335 Rhizobium leguminosarum bv. trifolii WSM1325 8014257 YP_002977164.1 CDS Rleg_3378 NC_012850.1 3393346 3394140 D KEGG: smd:Smed_5560 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: xylose isomerase; hydroxypyruvate isomerase 3393346..3394140 Rhizobium leguminosarum bv. trifolii WSM1325 8014258 YP_002977165.1 CDS Rleg_3379 NC_012850.1 3394137 3395012 D KEGG: mes:Meso_4460 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; 2-hydroxy-3-oxopropionate reductase 3394137..3395012 Rhizobium leguminosarum bv. trifolii WSM1325 8015790 YP_002977166.1 CDS Rleg_3380 NC_012850.1 3395121 3397220 D PFAM: Glycoside hydrolase family 42 domain protein; KEGG: sus:Acid_7597 beta-galactosidase; glycoside hydrolase family 42 3395121..3397220 Rhizobium leguminosarum bv. trifolii WSM1325 8015791 YP_002977167.1 CDS Rleg_3381 NC_012850.1 3397224 3397964 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: yen:YE0487 ABC transporter, ATP-binding protein; ABC transporter complement(3397224..3397964) Rhizobium leguminosarum bv. trifolii WSM1325 8014259 YP_002977168.1 CDS Rleg_3382 NC_012850.1 3397961 3398785 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: psp:PSPPH_2745 dipeptide transporter DppD-like protein; ABC transporter complement(3397961..3398785) Rhizobium leguminosarum bv. trifolii WSM1325 8014260 YP_002977169.1 CDS Rleg_3383 NC_012850.1 3398778 3399635 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE0489 transporter, permease protein; ABC transporter permease complement(3398778..3399635) Rhizobium leguminosarum bv. trifolii WSM1325 8014261 YP_002977170.1 CDS Rleg_3384 NC_012850.1 3399632 3400714 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_00581 ABC transport system permease protein; ABC transporter permease complement(3399632..3400714) Rhizobium leguminosarum bv. trifolii WSM1325 8014262 YP_002977171.1 CDS Rleg_3386 NC_012850.1 3402323 3402865 R KEGG: rec:RHECIAT_CH0003612 hypothetical protein; hypothetical protein complement(3402323..3402865) Rhizobium leguminosarum bv. trifolii WSM1325 8014263 YP_002977172.1 CDS Rleg_3387 NC_012850.1 3403132 3403605 D PFAM: Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: ret:RHE_CH03368 hypothetical protein; cupin 3403132..3403605 Rhizobium leguminosarum bv. trifolii WSM1325 8014264 YP_002977173.1 CDS ugpC NC_012850.1 3403692 3404801 R part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit complement(3403692..3404801) Rhizobium leguminosarum bv. trifolii WSM1325 8014265 YP_002977174.1 CDS Rleg_3389 NC_012850.1 3404814 3405728 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003615 sn-glycerol-3-phosphate ABC transporter, permease protein; ABC transporter permease complement(3404814..3405728) Rhizobium leguminosarum bv. trifolii WSM1325 8014266 YP_002977175.1 CDS Rleg_3390 NC_012850.1 3405739 3406623 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003616 sn-glycerol-3-phosphate ABC transporter, permease protein; ABC transporter permease complement(3405739..3406623) Rhizobium leguminosarum bv. trifolii WSM1325 8014267 YP_002977176.1 CDS Rleg_3391 NC_012850.1 3406846 3408201 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0003617 sn-glycerol 3-phosphate ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(3406846..3408201) Rhizobium leguminosarum bv. trifolii WSM1325 8014268 YP_002977177.1 CDS Rleg_3392 NC_012850.1 3408562 3409767 R PFAM: ROK family protein; KEGG: rec:RHECIAT_CH0003618 probable transcriptional regulator protein, ROK family; ROK family protein complement(3408562..3409767) Rhizobium leguminosarum bv. trifolii WSM1325 8014269 YP_002977178.1 CDS Rleg_3393 NC_012850.1 3409991 3411229 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0003619 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 3409991..3411229 Rhizobium leguminosarum bv. trifolii WSM1325 8014270 YP_002977179.1 CDS Rleg_3394 NC_012850.1 3411303 3412187 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003620 probable sugar ABC transporter, permease protein; ABC transporter permease 3411303..3412187 Rhizobium leguminosarum bv. trifolii WSM1325 8014271 YP_002977180.1 CDS Rleg_3395 NC_012850.1 3412187 3413032 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003621 probable sugar ABC transporter, permease protein; ABC transporter permease 3412187..3413032 Rhizobium leguminosarum bv. trifolii WSM1325 8014272 YP_002977181.1 CDS Rleg_3396 NC_012850.1 3413035 3414051 D PFAM: sugar isomerase (SIS); KEGG: rec:RHECIAT_CH0003622 probable sugar-processing enzyme, possibly aminotransferase protein; sugar isomerase (SIS) 3413035..3414051 Rhizobium leguminosarum bv. trifolii WSM1325 8014273 YP_002977182.1 CDS Rleg_3397 NC_012850.1 3414052 3414981 D PFAM: PfkB domain protein; KEGG: ret:RHE_CH03378 sugar kinase protein; PfkB domain-containing protein 3414052..3414981 Rhizobium leguminosarum bv. trifolii WSM1325 8015793 YP_002977183.1 CDS Rleg_3398 NC_012850.1 3414978 3416051 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003624 probable sugar ABC transporter, ATP-binding protein; ABC transporter 3414978..3416051 Rhizobium leguminosarum bv. trifolii WSM1325 8014274 YP_002977184.1 CDS Rleg_3399 NC_012850.1 3416183 3417010 R PFAM: glycoside hydrolase family 16; KEGG: ret:RHE_CH03380 endo-1,3-1,4-beta-glycanase protein; glycoside hydrolase complement(3416183..3417010) Rhizobium leguminosarum bv. trifolii WSM1325 8014275 YP_002977185.1 CDS Rleg_3400 NC_012850.1 3417061 3418542 R PFAM: polysaccharide biosynthesis protein; KEGG: ret:RHE_CH03381 exopolysaccharide polymerization/export protein; polysaccharide biosynthesis protein complement(3417061..3418542) Rhizobium leguminosarum bv. trifolii WSM1325 8014276 YP_002977186.1 CDS Rleg_3401 NC_012850.1 3418621 3419865 R PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH03382 glycosyltransferase; group 1 glycosyl transferase complement(3418621..3419865) Rhizobium leguminosarum bv. trifolii WSM1325 8014277 YP_002977187.1 CDS Rleg_3402 NC_012850.1 3419862 3421208 R PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH03383 glycosyltransferase; group 1 glycosyl transferase complement(3419862..3421208) Rhizobium leguminosarum bv. trifolii WSM1325 8014278 YP_002977188.1 CDS Rleg_3403 NC_012850.1 3421208 3421945 R PFAM: cyclic nucleotide-binding; KEGG: ret:RHE_CH03384 transcriptional regulator protein; Crp/Fnr family transcriptional regulator complement(3421208..3421945) Rhizobium leguminosarum bv. trifolii WSM1325 8014279 YP_002977189.1 CDS Rleg_3404 NC_012850.1 3422414 3423115 D PFAM: sugar transferase; KEGG: ret:RHE_CH03385 exopolysaccharide production protein; UDP-phosphate galactose phosphotransferase 3422414..3423115 Rhizobium leguminosarum bv. trifolii WSM1325 8014280 YP_002977190.1 CDS Rleg_3405 NC_012850.1 3423234 3425000 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: ret:RHE_CH03386 exopolysaccharide transporter; lipopolysaccharide biosynthesis protein 3423234..3425000 Rhizobium leguminosarum bv. trifolii WSM1325 8014281 YP_002977191.1 CDS Rleg_3406 NC_012850.1 3425075 3426019 D KEGG: ret:RHE_CH03387 glycosyltransferase; glycosyltransferase 3425075..3426019 Rhizobium leguminosarum bv. trifolii WSM1325 8014282 YP_002977192.1 CDS Rleg_3407 NC_012850.1 3426026 3427411 D PFAM: polysaccharide export protein; KEGG: ret:RHE_CH03388 exopolysaccharide biosynthesis protein; polysaccharide export protein 3426026..3427411 Rhizobium leguminosarum bv. trifolii WSM1325 8015794 YP_002977193.1 CDS Rleg_3408 NC_012850.1 3427535 3429001 D KEGG: ret:RHE_CH03389 hypothetical protein; hypothetical protein 3427535..3429001 Rhizobium leguminosarum bv. trifolii WSM1325 8015795 YP_002977194.1 CDS Rleg_3409 NC_012850.1 3429187 3429486 R hypothetical protein complement(3429187..3429486) Rhizobium leguminosarum bv. trifolii WSM1325 8014283 YP_002977195.1 CDS Rleg_3410 NC_012850.1 3429795 3430706 D PFAM: glycosyl transferase family 8; KEGG: ret:RHE_CH03391 glycosyltransferase; glycosyl transferase family protein 3429795..3430706 Rhizobium leguminosarum bv. trifolii WSM1325 8014284 YP_002977196.1 CDS Rleg_3411 NC_012850.1 3430703 3430849 D hypothetical protein 3430703..3430849 Rhizobium leguminosarum bv. trifolii WSM1325 8014285 YP_002977197.1 CDS Rleg_3412 NC_012850.1 3430839 3431861 D KEGG: ret:RHE_CH03392 hypothetical protein; hypothetical protein 3430839..3431861 Rhizobium leguminosarum bv. trifolii WSM1325 8014286 YP_002977198.1 CDS Rleg_3413 NC_012850.1 3432043 3432792 R PFAM: cyclic nucleotide-binding; KEGG: ret:RHE_CH03384 transcriptional regulator protein; Crp/Fnr family transcriptional regulator complement(3432043..3432792) Rhizobium leguminosarum bv. trifolii WSM1325 8014287 YP_002977199.1 CDS Rleg_3414 NC_012850.1 3433245 3433901 D PFAM: sugar transferase; KEGG: ret:RHE_CH03385 exopolysaccharide production protein; UDP-phosphate galactose phosphotransferase 3433245..3433901 Rhizobium leguminosarum bv. trifolii WSM1325 8014288 YP_002977200.1 CDS Rleg_3415 NC_012850.1 3434052 3434348 R hypothetical protein complement(3434052..3434348) Rhizobium leguminosarum bv. trifolii WSM1325 8014289 YP_002977201.1 CDS Rleg_3416 NC_012850.1 3434941 3436050 R PFAM: acyltransferase; KEGG: ret:RHE_CH03393 acetyltransferase protein; acyltransferase complement(3434941..3436050) Rhizobium leguminosarum bv. trifolii WSM1325 8014290 YP_002977202.1 CDS Rleg_3417 NC_012850.1 3436304 3438622 D KEGG: ret:RHE_CH03394 pyrroloquinoline-quinone-dependent quinate dehydrogenase protein; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone; membrane-bound PQQ-dependent dehydrogenase 3436304..3438622 Rhizobium leguminosarum bv. trifolii WSM1325 8014291 YP_002977203.1 CDS Rleg_3418 NC_012850.1 3438770 3440557 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; tetratricopeptide TPR_2 repeat protein; SMART: tetratricopeptide domain protein; KEGG: mlo:mll3276 adenylate cyclase Cya3; adenylate/guanylate cyclase 3438770..3440557 Rhizobium leguminosarum bv. trifolii WSM1325 8014292 YP_002977204.1 CDS Rleg_3419 NC_012850.1 3440750 3442921 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; tetratricopeptide TPR_4; tetratricopeptide TPR_2 repeat protein; SMART: tetratricopeptide domain protein; KEGG: adenylate cyclase protein; adenylate/guanylate cyclase 3440750..3442921 Rhizobium leguminosarum bv. trifolii WSM1325 8014293 YP_002977205.1 CDS Rleg_3420 NC_012850.1 3442928 3443434 R KEGG: hypothetical protein; hypothetical protein complement(3442928..3443434) Rhizobium leguminosarum bv. trifolii WSM1325 8015796 YP_002977206.1 CDS Rleg_3421 NC_012850.1 3443448 3444041 R PFAM: Ankyrin; SMART: Ankyrin; KEGG: ankyrin repeat protein; ankyrin complement(3443448..3444041) Rhizobium leguminosarum bv. trifolii WSM1325 8014294 YP_002977207.1 CDS Rleg_3422 NC_012850.1 3444174 3444908 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mlo:mll1686 transcriptional regulator; GntR family transcriptional regulator complement(3444174..3444908) Rhizobium leguminosarum bv. trifolii WSM1325 8014295 YP_002977208.1 CDS Rleg_3423 NC_012850.1 3445152 3446138 R KEGG: rec:RHECIAT_CH0003433 probable sugar ABC transporter, substrate-binding protein; sugar ABC transporter substrate-binding protein complement(3445152..3446138) Rhizobium leguminosarum bv. trifolii WSM1325 8014296 YP_002977209.1 CDS Rleg_3424 NC_012850.1 3446187 3447167 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ret:RHE_CH03191 UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase complement(3446187..3447167) Rhizobium leguminosarum bv. trifolii WSM1325 8014297 YP_002977210.1 CDS Rleg_3425 NC_012850.1 3447427 3448167 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03190 sugar ABC transporter, ATP-binding protein; ABC transporter 3447427..3448167 Rhizobium leguminosarum bv. trifolii WSM1325 8014298 YP_002977211.1 CDS Rleg_3426 NC_012850.1 3448208 3449206 D PFAM: inner-membrane translocator; KEGG: ret:RHE_CH03189 sugar ABC transporter, permease protein; inner-membrane translocator 3448208..3449206 Rhizobium leguminosarum bv. trifolii WSM1325 8014299 YP_002977212.1 CDS Rleg_3427 NC_012850.1 3449265 3450314 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004121 sugar ABC transporter, ATP-binding protein; ABC transporter complement(3449265..3450314) Rhizobium leguminosarum bv. trifolii WSM1325 8014300 YP_002977213.1 CDS Rleg_3428 NC_012850.1 3450328 3451170 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1221 probable sugar transport inner membrane protein; ABC transporter permease complement(3450328..3451170) Rhizobium leguminosarum bv. trifolii WSM1325 8014301 YP_002977214.1 CDS Rleg_3429 NC_012850.1 3451167 3452090 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1220 probable uspA protein; ABC transporter permease complement(3451167..3452090) Rhizobium leguminosarum bv. trifolii WSM1325 8014302 YP_002977215.1 CDS Rleg_3430 NC_012850.1 3452102 3453349 R PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_1217 hypothetical protein; extracellular solute-binding protein complement(3452102..3453349) Rhizobium leguminosarum bv. trifolii WSM1325 8014303 YP_002977216.1 CDS Rleg_3431 NC_012850.1 3453482 3454273 R PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: smd:Smed_3585 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3453482..3454273) Rhizobium leguminosarum bv. trifolii WSM1325 8014304 YP_002977217.1 CDS Rleg_3432 NC_012850.1 3454270 3455028 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bps:BPSS2073 GntR family regulator protein; GntR family transcriptional regulator complement(3454270..3455028) Rhizobium leguminosarum bv. trifolii WSM1325 8014305 YP_002977218.1 CDS Rleg_3433 NC_012850.1 3455189 3456334 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bbr:BB4687 mandelate racemase; mandelate racemase/muconate lactonizing protein 3455189..3456334 Rhizobium leguminosarum bv. trifolii WSM1325 8015797 YP_002977219.1 CDS Rleg_3434 NC_012850.1 3456348 3457259 D KEGG: sgl:SG0242 hypothetical protein; hypothetical protein 3456348..3457259 Rhizobium leguminosarum bv. trifolii WSM1325 8014306 YP_002977220.1 CDS Rleg_3435 NC_012850.1 3457259 3457594 D hypothetical protein 3457259..3457594 Rhizobium leguminosarum bv. trifolii WSM1325 8014307 YP_002977221.1 CDS Rleg_3436 NC_012850.1 3457639 3459033 R PFAM: FAD dependent oxidoreductase; KEGG: tbd:Tbd_1475 hypothetical protein; FAD dependent oxidoreductase complement(3457639..3459033) Rhizobium leguminosarum bv. trifolii WSM1325 8015798 YP_002977222.1 CDS Rleg_3437 NC_012850.1 3459053 3459838 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:bll7886 3-oxoacyl-[acyl-carrier-protein] reductase; short-chain dehydrogenase/reductase SDR complement(3459053..3459838) Rhizobium leguminosarum bv. trifolii WSM1325 8014308 YP_002977223.1 CDS Rleg_3438 NC_012850.1 3467123 3467461 D PFAM: protein of unknown function DUF883 ElaB; KEGG: rec:RHECIAT_CH0003648 hypothetical protein; hypothetical protein 3467123..3467461 Rhizobium leguminosarum bv. trifolii WSM1325 8014312 YP_002977224.1 CDS Rleg_3439 NC_012850.1 3467602 3467808 D KEGG: rec:RHECIAT_CH0003649 hypothetical protein; hypothetical protein 3467602..3467808 Rhizobium leguminosarum bv. trifolii WSM1325 8014313 YP_002977225.1 CDS Rleg_3440 NC_012850.1 3467967 3468773 D PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: ret:RHE_CH03406 pseudouridylate synthase, ribosomal large subunit protein; pseudouridine synthase 3467967..3468773 Rhizobium leguminosarum bv. trifolii WSM1325 8014314 YP_002977226.1 CDS Rleg_3441 NC_012850.1 3468770 3469474 D Involved in nucleotide synthesis and salvage; phosphoribosyltransferase 3468770..3469474 Rhizobium leguminosarum bv. trifolii WSM1325 8014315 YP_002977227.1 CDS Rleg_3442 NC_012850.1 3469578 3471323 D PFAM: citrate transporter; TrkA-C domain protein; KEGG: rec:RHECIAT_CH0003652 transporter protein; citrate transporter 3469578..3471323 Rhizobium leguminosarum bv. trifolii WSM1325 8014316 YP_002977228.1 CDS Rleg_3443 NC_012850.1 3471408 3472352 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 3471408..3472352 Rhizobium leguminosarum bv. trifolii WSM1325 8014317 YP_002977229.1 CDS Rleg_3444 NC_012850.1 3472563 3473165 D PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0003654 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 3472563..3473165 Rhizobium leguminosarum bv. trifolii WSM1325 8014318 YP_002977230.1 CDS Rleg_3445 NC_012850.1 3473334 3474545 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0003655 probable protein secretion protein, HlyD family; RND family efflux transporter MFP subunit 3473334..3474545 Rhizobium leguminosarum bv. trifolii WSM1325 8014319 YP_002977231.1 CDS Rleg_3446 NC_012850.1 3474594 3477704 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: ret:RHE_CH03412 multidrug ABC transporter; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3474594..3477704 Rhizobium leguminosarum bv. trifolii WSM1325 8014320 YP_002977232.1 CDS Rleg_3447 NC_012850.1 3477855 3479288 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ret:RHE_CH03413 nodulation protein (outer membrane efflux protein); NodT family RND efflux system outer membrane lipoprotein 3477855..3479288 Rhizobium leguminosarum bv. trifolii WSM1325 8015802 YP_002977233.1 CDS Rleg_3448 NC_012850.1 3479463 3480506 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_CH0003658 probable transcriptional regulator protein, LacI family; LacI family transcriptional regulator 3479463..3480506 Rhizobium leguminosarum bv. trifolii WSM1325 8014321 YP_002977234.1 CDS Rleg_3449 NC_012850.1 3480508 3480609 D hypothetical protein 3480508..3480609 Rhizobium leguminosarum bv. trifolii WSM1325 8014322 YP_002977235.1 CDS Rleg_3450 NC_012850.1 3480614 3481534 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ret:RHE_CH03419 inosine-uridine preferring nucleoside hydrolase protein; inosine/uridine-preferring nucleoside hydrolase 3480614..3481534 Rhizobium leguminosarum bv. trifolii WSM1325 8014323 YP_002977236.1 CDS Rleg_3451 NC_012850.1 3481531 3483312 D PFAM: amidohydrolase; KEGG: rec:RHECIAT_CH0003664 adenine deaminase protein; adenine deaminase 3481531..3483312 Rhizobium leguminosarum bv. trifolii WSM1325 8014324 YP_002977237.1 CDS Rleg_3452 NC_012850.1 3483687 3484619 D PFAM: periplasmic solute binding protein; KEGG: zinc ABC transporter ; K11604 manganese/iron transport system substrate-binding protein; periplasmic solute binding protein 3483687..3484619 Rhizobium leguminosarum bv. trifolii WSM1325 8014325 YP_002977238.1 CDS Rleg_3453 NC_012850.1 3484616 3485518 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: zinc ABC transporter; ABC transporter 3484616..3485518 Rhizobium leguminosarum bv. trifolii WSM1325 8014326 YP_002977239.1 CDS Rleg_3454 NC_012850.1 3485515 3486375 D PFAM: ABC transporter; transport system permease protein; KEGG: znuB; zinc uptake ABC transporter ; K11605 manganese/iron transport system permease protein; ABC transporter 3485515..3486375 Rhizobium leguminosarum bv. trifolii WSM1325 8015803 YP_002977240.1 CDS Rleg_3455 NC_012850.1 3486372 3487217 D PFAM: ABC transporter; KEGG: zinc ABC transporter ; K11606 manganese/iron transport system permease protein; ABC transporter 3486372..3487217 Rhizobium leguminosarum bv. trifolii WSM1325 8014327 YP_002977241.1 CDS Rleg_3456 NC_012850.1 3487355 3488524 R KEGG: rec:RHECIAT_CH0003665 hippurate hydrolase protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(3487355..3488524) Rhizobium leguminosarum bv. trifolii WSM1325 8014328 YP_002977242.1 CDS Rleg_3457 NC_012850.1 3488741 3490246 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: rec:RHECIAT_CH0003666 hypothetical protein; hypothetical protein complement(3488741..3490246) Rhizobium leguminosarum bv. trifolii WSM1325 8015804 YP_002977243.1 CDS Rleg_3458 NC_012850.1 3490256 3490717 R PFAM: protein of unknown function DUF1468; KEGG: rec:RHECIAT_CH0003667 hypothetical protein; hypothetical protein complement(3490256..3490717) Rhizobium leguminosarum bv. trifolii WSM1325 8014329 YP_002977244.1 CDS Rleg_3459 NC_012850.1 3490938 3491921 R PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0003668 hypothetical protein; hypothetical protein complement(3490938..3491921) Rhizobium leguminosarum bv. trifolii WSM1325 8014330 YP_002977245.1 CDS Rleg_3460 NC_012850.1 3492151 3493485 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: ret:RHE_CH03433 two-component response regulator protein; two component Fis family sigma54-specific transcriptional regulator complement(3492151..3493485) Rhizobium leguminosarum bv. trifolii WSM1325 8014331 YP_002977246.1 CDS Rleg_3461 NC_012850.1 3493482 3495284 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH03434 two-component sensor histidine kinase protein; histidine kinase complement(3493482..3495284) Rhizobium leguminosarum bv. trifolii WSM1325 8014332 YP_002977247.1 CDS Rleg_3462 NC_012850.1 3495470 3496132 D PFAM: oxidoreductase molybdopterin binding; KEGG: ret:RHE_CH03435 oxidoreductase protein; oxidoreductase molybdopterin binding 3495470..3496132 Rhizobium leguminosarum bv. trifolii WSM1325 8014333 YP_002977248.1 CDS Rleg_3463 NC_012850.1 3496117 3496749 R KEGG: rec:RHECIAT_CH0003672 hypothetical protein; hypothetical protein complement(3496117..3496749) Rhizobium leguminosarum bv. trifolii WSM1325 8014334 YP_002977249.1 CDS Rleg_3464 NC_012850.1 3496800 3497546 R KEGG: rec:RHECIAT_CH0003673 hypothetical protein; hypothetical protein complement(3496800..3497546) Rhizobium leguminosarum bv. trifolii WSM1325 8014335 YP_002977250.1 CDS Rleg_3465 NC_012850.1 3497663 3497872 R KEGG: ret:RHE_CH03438 hypothetical protein; hypothetical protein complement(3497663..3497872) Rhizobium leguminosarum bv. trifolii WSM1325 8014336 YP_002977251.1 CDS Rleg_3466 NC_012850.1 3498106 3498660 D PFAM: phosphoglycerate mutase; KEGG: rec:RHECIAT_CH0003675 phosphoglycerate mutase protein; phosphoglycerate mutase 3498106..3498660 Rhizobium leguminosarum bv. trifolii WSM1325 8014337 YP_002977252.1 CDS Rleg_3467 NC_012850.1 3498760 3498876 D hypothetical protein 3498760..3498876 Rhizobium leguminosarum bv. trifolii WSM1325 8014338 YP_002977253.1 CDS Rleg_3468 NC_012850.1 3499118 3500689 D KEGG: rec:RHECIAT_CH0003677 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 3499118..3500689 Rhizobium leguminosarum bv. trifolii WSM1325 8014339 YP_002977254.1 CDS Rleg_3469 NC_012850.1 3500760 3502361 R PFAM: phosphate transporter; KEGG: phosphate transporter ; K03306 inorganic phosphate transporter, PiT family; phosphate transporter complement(3500760..3502361) Rhizobium leguminosarum bv. trifolii WSM1325 8014340 YP_002977255.1 CDS Rleg_3470 NC_012850.1 3502654 3503832 D Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; acetate kinase 3502654..3503832 Rhizobium leguminosarum bv. trifolii WSM1325 8014341 YP_002977256.1 CDS Rleg_3471 NC_012850.1 3503904 3506288 D PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: rec:RHECIAT_CH0003679 xylulose-5-phosphate/fructose-6-phosphate phosphoketolase protein; phosphoketolase 3503904..3506288 Rhizobium leguminosarum bv. trifolii WSM1325 8014342 YP_002977257.1 CDS Rleg_3472 NC_012850.1 3506347 3506646 D hypothetical protein 3506347..3506646 Rhizobium leguminosarum bv. trifolii WSM1325 8014343 YP_002977258.1 CDS Rleg_3473 NC_012850.1 3506715 3507605 R SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0003681 transcriptional regulator protein, AraC family for p-hydroxybenzoate hydroxylase protein; AraC family transcriptional regulator complement(3506715..3507605) Rhizobium leguminosarum bv. trifolii WSM1325 8014344 YP_002977259.1 CDS Rleg_3474 NC_012850.1 3507733 3508905 D catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 3507733..3508905 Rhizobium leguminosarum bv. trifolii WSM1325 8014345 YP_002977260.1 CDS Rleg_3475 NC_012850.1 3509062 3510234 D PFAM: Extracellular ligand-binding receptor; KEGG: ret:RHE_CH03445 branched-chain amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor 3509062..3510234 Rhizobium leguminosarum bv. trifolii WSM1325 8014346 YP_002977261.1 CDS Rleg_3476 NC_012850.1 3510310 3511173 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003684 probable branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 3510310..3511173 Rhizobium leguminosarum bv. trifolii WSM1325 8014347 YP_002977262.1 CDS Rleg_3477 NC_012850.1 3511175 3512176 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003685 probable branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 3511175..3512176 Rhizobium leguminosarum bv. trifolii WSM1325 8014348 YP_002977263.1 CDS Rleg_3478 NC_012850.1 3512176 3512940 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03448 branched chain amino acid ABC transporter ATP-binding protein; ABC transporter 3512176..3512940 Rhizobium leguminosarum bv. trifolii WSM1325 8014349 YP_002977264.1 CDS Rleg_3479 NC_012850.1 3512921 3513637 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03449 branched chain amino acid ABC transporter ATP-binding protein; ABC transporter 3512921..3513637 Rhizobium leguminosarum bv. trifolii WSM1325 8014350 YP_002977265.1 CDS Rleg_3480 NC_012850.1 3514045 3514875 D TIGRFAM: outer membrane adhesin like proteiin; KEGG: ret:RHE_CH03450 autoaggregation protein (adhering protein); outer membrane adhesin-like protein 3514045..3514875 Rhizobium leguminosarum bv. trifolii WSM1325 8014351 YP_002977266.1 CDS Rleg_3481 NC_012850.1 3515039 3515167 D hypothetical protein 3515039..3515167 Rhizobium leguminosarum bv. trifolii WSM1325 8014352 YP_002977267.1 CDS mnmA NC_012850.1 3515537 3516748 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3515537..3516748) Rhizobium leguminosarum bv. trifolii WSM1325 8014354 YP_002977268.1 CDS Rleg_3483 NC_012850.1 3516953 3517054 R hypothetical protein complement(3516953..3517054) Rhizobium leguminosarum bv. trifolii WSM1325 8014355 YP_002977269.1 CDS Rleg_3484 NC_012850.1 3517185 3519338 R KEGG: sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(3517185..3519338) Rhizobium leguminosarum bv. trifolii WSM1325 8014356 YP_002977270.1 CDS Rleg_3485 NC_012850.1 3519503 3519769 D KEGG: rec:RHECIAT_CH0003692 hypothetical protein; hypothetical protein 3519503..3519769 Rhizobium leguminosarum bv. trifolii WSM1325 8014357 YP_002977271.1 CDS Rleg_3486 NC_012850.1 3519860 3521455 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(3519860..3521455) Rhizobium leguminosarum bv. trifolii WSM1325 8014358 YP_002977272.1 CDS Rleg_3487 NC_012850.1 3521540 3522718 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(3521540..3522718) Rhizobium leguminosarum bv. trifolii WSM1325 8014359 YP_002977273.1 CDS Rleg_3488 NC_012850.1 3522907 3523743 R PFAM: surface antigen msp4 family protein; KEGG: rec:RHECIAT_CH0003695 probable heat resistant agglutinin 1 protein; surface antigen msp4 family protein complement(3522907..3523743) Rhizobium leguminosarum bv. trifolii WSM1325 8014360 YP_002977274.1 CDS Rleg_3489 NC_012850.1 3524037 3524276 R KEGG: ret:RHE_PE00274 hypothetical protein; hypothetical protein complement(3524037..3524276) Rhizobium leguminosarum bv. trifolii WSM1325 8015805 YP_002977275.1 CDS glmM NC_012850.1 3524583 3525935 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3524583..3525935) Rhizobium leguminosarum bv. trifolii WSM1325 8014361 YP_002977276.1 CDS Rleg_3491 NC_012850.1 3526177 3528123 R KEGG: rec:RHECIAT_CH0003697 cell division metalloproteinase protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(3526177..3528123) Rhizobium leguminosarum bv. trifolii WSM1325 8014362 YP_002977277.1 CDS Rleg_3492 NC_012850.1 3528205 3529680 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: ret:RHE_CH03459 cell cycle protein MesJ/cytosine deaminase-related protein; tRNA(Ile)-lysidine synthetase complement(3528205..3529680) Rhizobium leguminosarum bv. trifolii WSM1325 8015806 YP_002977278.1 CDS Rleg_3493 NC_012850.1 3529692 3530678 R TIGRFAM: tol-pal system protein YbgF; PFAM: tetratricopeptide TPR_2 repeat protein; KEGG: rec:RHECIAT_CH0003699 hypothetical protein; tol-pal system protein YbgF complement(3529692..3530678) Rhizobium leguminosarum bv. trifolii WSM1325 8014363 YP_002977279.1 CDS Rleg_3494 NC_012850.1 3530842 3531375 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rec:RHECIAT_CH0003700 outer membrane peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein complement(3530842..3531375) Rhizobium leguminosarum bv. trifolii WSM1325 8014364 YP_002977280.1 CDS tolB NC_012850.1 3531528 3532835 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(3531528..3532835) Rhizobium leguminosarum bv. trifolii WSM1325 8014365 YP_002977281.1 CDS Rleg_3496 NC_012850.1 3533071 3533268 R hypothetical protein complement(3533071..3533268) Rhizobium leguminosarum bv. trifolii WSM1325 8014366 YP_002977282.1 CDS Rleg_3497 NC_012850.1 3533269 3534408 R KEGG: rec:RHECIAT_CH0003703 outer membrane protein; outer membrane protein complement(3533269..3534408) Rhizobium leguminosarum bv. trifolii WSM1325 8014367 YP_002977283.1 CDS Rleg_3498 NC_012850.1 3534417 3534872 R TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rec:RHECIAT_CH0003704 biopolymer transporter protein, ExbD/TolR family; protein TolR complement(3534417..3534872) Rhizobium leguminosarum bv. trifolii WSM1325 8014368 YP_002977284.1 CDS Rleg_3499 NC_012850.1 3534891 3535610 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: rec:RHECIAT_CH0003705 biopolymer transporter protein; protein TolQ complement(3534891..3535610) Rhizobium leguminosarum bv. trifolii WSM1325 8015807 YP_002977285.1 CDS Rleg_3500 NC_012850.1 3535986 3536441 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rec:RHECIAT_CH0003706 probable 4-hydroxybenzoyl-CoA thioesterase protein; tol-pal system-associated acyl-CoA thioesterase complement(3535986..3536441) Rhizobium leguminosarum bv. trifolii WSM1325 8014369 YP_002977286.1 CDS Rleg_3501 NC_012850.1 3536583 3537803 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_CH0003707 sulfoquinovosyl diacylglycerol protein (sulfolipid biosynthesis); NAD-dependent epimerase/dehydratase 3536583..3537803 Rhizobium leguminosarum bv. trifolii WSM1325 8014370 YP_002977287.1 CDS Rleg_3502 NC_012850.1 3537946 3538785 D PFAM: glycosyl transferase family 8; KEGG: rec:RHECIAT_CH0003708 glycosyltransferase protein (sulfolipid biosynthesis); glycosyl transferase family protein 3537946..3538785 Rhizobium leguminosarum bv. trifolii WSM1325 8014371 YP_002977288.1 CDS Rleg_3503 NC_012850.1 3538782 3539699 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0003709 sulfolipid biosynthesis protein; NAD-dependent epimerase/dehydratase 3538782..3539699 Rhizobium leguminosarum bv. trifolii WSM1325 8014372 YP_002977289.1 CDS Rleg_3504 NC_012850.1 3539759 3540466 D KEGG: msl:Msil_0613 TonB family protein; hypothetical protein 3539759..3540466 Rhizobium leguminosarum bv. trifolii WSM1325 8014373 YP_002977290.1 CDS Rleg_3505 NC_012850.1 3540584 3541171 D TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rec:RHECIAT_CH0003710 probable 5-formyltetrahydrofolate cyclo-ligase protein; 5-formyltetrahydrofolate cyclo-ligase 3540584..3541171 Rhizobium leguminosarum bv. trifolii WSM1325 8014374 YP_002977291.1 CDS Rleg_3506 NC_012850.1 3541175 3541999 D PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0003711 phosphatase protein; metallophosphoesterase 3541175..3541999 Rhizobium leguminosarum bv. trifolii WSM1325 8015808 YP_002977292.1 CDS Rleg_3507 NC_012850.1 3542140 3542985 D KEGG: rec:RHECIAT_CH0003712 hypothetical protein; hypothetical protein 3542140..3542985 Rhizobium leguminosarum bv. trifolii WSM1325 8014375 YP_002977293.1 CDS Rleg_3508 NC_012850.1 3543123 3543626 R KEGG: rec:RHECIAT_CH0003713 hypothetical protein; hypothetical protein complement(3543123..3543626) Rhizobium leguminosarum bv. trifolii WSM1325 8014376 YP_002977294.1 CDS Rleg_3509 NC_012850.1 3543768 3544514 D PFAM: protein of unknown function DUF28; KEGG: rec:RHECIAT_CH0003714 hypothetical protein; hypothetical protein 3543768..3544514 Rhizobium leguminosarum bv. trifolii WSM1325 8014377 YP_002977295.1 CDS Rleg_3510 NC_012850.1 3544599 3545600 R PFAM: Luciferase-like monooxygenase; KEGG: ret:RHE_CH03476 oxidoreductase protein; luciferase-like monooxygenase complement(3544599..3545600) Rhizobium leguminosarum bv. trifolii WSM1325 8014378 YP_002977296.1 CDS Rleg_3511 NC_012850.1 3545726 3548041 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0003716 probable methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3545726..3548041) Rhizobium leguminosarum bv. trifolii WSM1325 8014379 YP_002977297.1 CDS ruvC NC_012850.1 3548287 3548796 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3548287..3548796 Rhizobium leguminosarum bv. trifolii WSM1325 8015809 YP_002977298.1 CDS Rleg_3513 NC_012850.1 3548851 3549114 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: ret:RHE_CH03479 regulator protein of stationary/sporulation gene expression; AbrC family transcriptional regulator 3548851..3549114 Rhizobium leguminosarum bv. trifolii WSM1325 8014380 YP_002977299.1 CDS Rleg_3514 NC_012850.1 3549095 3549511 D PFAM: PilT protein domain protein; KEGG: ret:RHE_CH03480 nucleic acid-binding protein; PilT protein domain-containing protein 3549095..3549511 Rhizobium leguminosarum bv. trifolii WSM1325 8014381 YP_002977300.1 CDS ruvA NC_012850.1 3549525 3550139 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3549525..3550139 Rhizobium leguminosarum bv. trifolii WSM1325 8014382 YP_002977301.1 CDS ruvB NC_012850.1 3550223 3551263 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3550223..3551263 Rhizobium leguminosarum bv. trifolii WSM1325 8014383 YP_002977302.1 CDS Rleg_3517 NC_012850.1 3551264 3552166 D PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0003722 probable phosphatase protein; metallophosphoesterase 3551264..3552166 Rhizobium leguminosarum bv. trifolii WSM1325 8014384 YP_002977303.1 CDS Rleg_3518 NC_012850.1 3552173 3552685 D PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0003723 nucleoside hydrolase protein, MutT/NUDIX family; NUDIX hydrolase 3552173..3552685 Rhizobium leguminosarum bv. trifolii WSM1325 8015810 YP_002977304.1 CDS Rleg_3519 NC_012850.1 3552776 3553339 D PFAM: DinB family protein; KEGG: ret:RHE_CH03484 hypothetical protein; DinB family protein 3552776..3553339 Rhizobium leguminosarum bv. trifolii WSM1325 8014385 YP_002977305.1 CDS Rleg_3520 NC_012850.1 3553427 3554809 R PFAM: virulence factor family protein; KEGG: ret:RHE_CH03485 acid tolerance and virulence protein; virulence factor family protein complement(3553427..3554809) Rhizobium leguminosarum bv. trifolii WSM1325 8014386 YP_002977306.1 CDS Rleg_3521 NC_012850.1 3554806 3557409 R PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: rec:RHECIAT_CH0003726 hypothetical protein; hypothetical protein complement(3554806..3557409) Rhizobium leguminosarum bv. trifolii WSM1325 8014387 YP_002977307.1 CDS Rleg_3522 NC_012850.1 3557647 3558024 D PFAM: DoxX family protein; KEGG: rec:RHECIAT_CH0003727 hypothetical protein; DoxX family protein 3557647..3558024 Rhizobium leguminosarum bv. trifolii WSM1325 8014388 YP_002977308.1 CDS Rleg_3523 NC_012850.1 3558031 3560142 R PFAM: MscS Mechanosensitive ion channel; KEGG: rec:RHECIAT_CH0003728 probable small-conductance mechanosensitive channel transmembrane protein; mechanosensitive ion channel protein MscS complement(3558031..3560142) Rhizobium leguminosarum bv. trifolii WSM1325 8014389 YP_002977309.1 CDS Rleg_3524 NC_012850.1 3560349 3561380 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(3560349..3561380) Rhizobium leguminosarum bv. trifolii WSM1325 8015811 YP_002977310.1 CDS Rleg_3525 NC_012850.1 3561516 3561998 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rec:RHECIAT_CH0003730 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(3561516..3561998) Rhizobium leguminosarum bv. trifolii WSM1325 8014390 YP_002977311.1 CDS Rleg_3526 NC_012850.1 3562068 3562400 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ret:RHE_CH03490 ArsR family transcriptional regulator; ArsR family transcriptional regulator 3562068..3562400 Rhizobium leguminosarum bv. trifolii WSM1325 8014391 YP_002977312.1 CDS Rleg_3527 NC_012850.1 3562477 3563013 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0003732 hypothetical protein; XRE family transcriptional regulator 3562477..3563013 Rhizobium leguminosarum bv. trifolii WSM1325 8015812 YP_002977313.1 CDS Rleg_3528 NC_012850.1 3563111 3564094 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH03492 UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase 3563111..3564094 Rhizobium leguminosarum bv. trifolii WSM1325 8014392 YP_002977314.1 CDS Rleg_3529 NC_012850.1 3564340 3565827 D KEGG: hypothetical protein; hypothetical protein 3564340..3565827 Rhizobium leguminosarum bv. trifolii WSM1325 8014393 YP_002977315.1 CDS Rleg_3530 NC_012850.1 3566407 3566784 R PFAM: protein of unknown function DUF710; KEGG: ret:RHE_CH03493 hypothetical protein; hypothetical protein complement(3566407..3566784) Rhizobium leguminosarum bv. trifolii WSM1325 8014395 YP_002977316.1 CDS Rleg_3531 NC_012850.1 3566800 3567075 R KEGG: ret:RHE_CH03494 hypothetical protein; hypothetical protein complement(3566800..3567075) Rhizobium leguminosarum bv. trifolii WSM1325 8014396 YP_002977317.1 CDS Rleg_3532 NC_012850.1 3567398 3569371 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3567398..3569371 Rhizobium leguminosarum bv. trifolii WSM1325 8014397 YP_002977318.1 CDS Rleg_3533 NC_012850.1 3569453 3570463 D KEGG: gap; glyceraldehyde-3-phosphate dehydrogenase, type I ; K00134 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 3569453..3570463 Rhizobium leguminosarum bv. trifolii WSM1325 8014398 YP_002977319.1 CDS Rleg_3534 NC_012850.1 3570483 3570593 D hypothetical protein 3570483..3570593 Rhizobium leguminosarum bv. trifolii WSM1325 8014399 YP_002977320.1 CDS Rleg_3535 NC_012850.1 3570713 3571027 D KEGG: ret:RHE_CH03497 hypothetical protein; hypothetical protein 3570713..3571027 Rhizobium leguminosarum bv. trifolii WSM1325 8014400 YP_002977321.1 CDS Rleg_3536 NC_012850.1 3571217 3571396 D KEGG: rec:RHECIAT_CH0003739 hypothetical protein; hypothetical protein 3571217..3571396 Rhizobium leguminosarum bv. trifolii WSM1325 8014401 YP_002977322.1 CDS Rleg_3537 NC_012850.1 3571890 3573764 D the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 3571890..3573764 Rhizobium leguminosarum bv. trifolii WSM1325 8014402 YP_002977323.1 CDS pgk NC_012850.1 3573835 3575037 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3573835..3575037 Rhizobium leguminosarum bv. trifolii WSM1325 8014403 YP_002977324.1 CDS Rleg_3539 NC_012850.1 3575263 3576288 D PFAM: fructose-bisphosphate aldolase class-I; KEGG: ret:RHE_CH03500 fructose-bisphosphate aldolase protein; Fructose-bisphosphate aldolase 3575263..3576288 Rhizobium leguminosarum bv. trifolii WSM1325 8014404 YP_002977325.1 CDS Rleg_3540 NC_012850.1 3576445 3577368 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: rec:RHECIAT_CH0003744 phenazine biosynthesisprotein; phenazine biosynthesis protein PhzF family protein 3576445..3577368 Rhizobium leguminosarum bv. trifolii WSM1325 8014405 YP_002977326.1 CDS Rleg_3541 NC_012850.1 3577415 3577579 R KEGG: rec:RHECIAT_CH0003745 hypothetical protein; hypothetical protein complement(3577415..3577579) Rhizobium leguminosarum bv. trifolii WSM1325 8015813 YP_002977327.1 CDS Rleg_3542 NC_012850.1 3577753 3579051 D PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH03503 transporter permease protein; major facilitator superfamily protein 3577753..3579051 Rhizobium leguminosarum bv. trifolii WSM1325 8014406 YP_002977328.1 CDS Rleg_3543 NC_012850.1 3579093 3579284 D PFAM: protein of unknown function DUF1192; KEGG: ret:RHE_CH03504 hypothetical protein; hypothetical protein 3579093..3579284 Rhizobium leguminosarum bv. trifolii WSM1325 8014407 YP_002977329.1 CDS Rleg_3544 NC_012850.1 3579676 3580191 D PFAM: protein of unknown function DUF1465; KEGG: ret:RHE_CH03505 hypothetical protein; hypothetical protein 3579676..3580191 Rhizobium leguminosarum bv. trifolii WSM1325 8015814 YP_002977330.1 CDS rpmE NC_012850.1 3580381 3580602 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(3580381..3580602) Rhizobium leguminosarum bv. trifolii WSM1325 8014408 YP_002977331.1 CDS Rleg_3546 NC_012850.1 3580795 3582597 D KEGG: rec:RHECIAT_CH0003750 probable multidrug ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; lipid A ABC exporter family, fused ATPase and inner membrane subunits 3580795..3582597 Rhizobium leguminosarum bv. trifolii WSM1325 8014409 YP_002977332.1 CDS Rleg_3547 NC_012850.1 3582741 3583733 D PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0003751 hypothetical protein; hypothetical protein 3582741..3583733 Rhizobium leguminosarum bv. trifolii WSM1325 8014410 YP_002977333.1 CDS Rleg_3548 NC_012850.1 3584019 3584207 D PFAM: protein of unknown function DUF1508; KEGG: rec:RHECIAT_CH0003753 hypothetical protein; hypothetical protein 3584019..3584207 Rhizobium leguminosarum bv. trifolii WSM1325 8014411 YP_002977334.1 CDS Rleg_3549 NC_012850.1 3584480 3584818 D PFAM: YCII-related; KEGG: rec:RHECIAT_CH0003754 hypothetical protein; hypothetical protein 3584480..3584818 Rhizobium leguminosarum bv. trifolii WSM1325 8014412 YP_002977335.1 CDS Rleg_3550 NC_012850.1 3584826 3586076 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: ret:RHE_CH03511 RNA polymerase ECF-subfamily sigma factor; RNA polymerase sigma 70 family subunit 3584826..3586076 Rhizobium leguminosarum bv. trifolii WSM1325 8015815 YP_002977336.1 CDS Rleg_3551 NC_012850.1 3586077 3587108 R PFAM: OmpA/MotB domain protein; KEGG: ret:RHE_CH03512 hypothetical protein; hypothetical protein complement(3586077..3587108) Rhizobium leguminosarum bv. trifolii WSM1325 8014413 YP_002977337.1 CDS Rleg_3552 NC_012850.1 3587112 3588218 R KEGG: ret:RHE_CH03513 hypothetical protein; hypothetical protein complement(3587112..3588218) Rhizobium leguminosarum bv. trifolii WSM1325 8014414 YP_002977338.1 CDS Rleg_3553 NC_012850.1 3588331 3589131 R PFAM: inositol monophosphatase; KEGG: rec:RHECIAT_CH0003758 myo-inositol-1(or 4)-monophosphatase protein; inositol monophosphatase complement(3588331..3589131) Rhizobium leguminosarum bv. trifolii WSM1325 8014415 YP_002977339.1 CDS Rleg_3554 NC_012850.1 3589275 3589928 D PFAM: regulatory protein TetR; KEGG: sme:SMa2381 hypothetical protein; TetR family transcriptional regulator 3589275..3589928 Rhizobium leguminosarum bv. trifolii WSM1325 8014416 YP_002977340.1 CDS Rleg_3555 NC_012850.1 3590003 3590743 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mms:mma_1860 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 3590003..3590743 Rhizobium leguminosarum bv. trifolii WSM1325 8014417 YP_002977341.1 CDS Rleg_3556 NC_012850.1 3590826 3591923 R KEGG: ret:RHE_CH03515 chemotaxis-specific methylesterase protein; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase complement(3590826..3591923) Rhizobium leguminosarum bv. trifolii WSM1325 8015816 YP_002977342.1 CDS Rleg_3557 NC_012850.1 3591985 3592842 R KEGG: rec:RHECIAT_CH0003765 methyl-accepting chemotaxis protein O-methyltransferase protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR complement(3591985..3592842) Rhizobium leguminosarum bv. trifolii WSM1325 8014418 YP_002977343.1 CDS Rleg_3558 NC_012850.1 3592873 3593355 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: ret:RHE_CH03517 chemotaxis signal transduction protein; CheW protein complement(3592873..3593355) Rhizobium leguminosarum bv. trifolii WSM1325 8014419 YP_002977344.1 CDS Rleg_3559 NC_012850.1 3593352 3595160 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0003767 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3593352..3595160) Rhizobium leguminosarum bv. trifolii WSM1325 8014420 YP_002977345.1 CDS Rleg_3560 NC_012850.1 3595370 3597292 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0003768 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3595370..3597292) Rhizobium leguminosarum bv. trifolii WSM1325 8014421 YP_002977346.1 CDS Rleg_3561 NC_012850.1 3597538 3599247 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_CH0003769 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3597538..3599247) Rhizobium leguminosarum bv. trifolii WSM1325 8014422 YP_002977347.1 CDS Rleg_3562 NC_012850.1 3599279 3599788 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: ret:RHE_CH03521 chemotaxis signal transduction protein; CheW protein complement(3599279..3599788) Rhizobium leguminosarum bv. trifolii WSM1325 8015817 YP_002977348.1 CDS Rleg_3563 NC_012850.1 3599785 3601824 R PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: rec:RHECIAT_CH0003771 chemotaxis two-component sensor histidine kinase protein; CheA signal transduction histidine kinase complement(3599785..3601824) Rhizobium leguminosarum bv. trifolii WSM1325 8014423 YP_002977349.1 CDS Rleg_3564 NC_012850.1 3601821 3602189 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ret:RHE_CH03523 chemotaxis two-component response regulator protein; response regulator receiver protein complement(3601821..3602189) Rhizobium leguminosarum bv. trifolii WSM1325 8014424 YP_002977350.1 CDS Rleg_3565 NC_012850.1 3602186 3602515 R KEGG: rec:RHECIAT_CH0003773 hypothetical protein; hypothetical protein complement(3602186..3602515) Rhizobium leguminosarum bv. trifolii WSM1325 8014425 YP_002977351.1 CDS Rleg_3566 NC_012850.1 3602856 3604598 D KEGG: ret:RHE_CH03525 chemotaxis sensory transducer protein; chemotaxis sensory transducer protein 3602856..3604598 Rhizobium leguminosarum bv. trifolii WSM1325 8014426 YP_002977352.1 CDS Rleg_3567 NC_012850.1 3604614 3605696 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: rec:RHECIAT_CH0003775 hypothetical protein; Sel1 domain-containing protein repeat-containing protein complement(3604614..3605696) Rhizobium leguminosarum bv. trifolii WSM1325 8014427 YP_002977353.1 CDS Rleg_3568 NC_012850.1 3605707 3606360 R catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole; thiamine-phosphate pyrophosphorylase complement(3605707..3606360) Rhizobium leguminosarum bv. trifolii WSM1325 8015818 YP_002977354.1 CDS Rleg_3569 NC_012850.1 3606468 3607232 D PFAM: protein of unknown function DUF81; KEGG: ret:RHE_CH03528 transporter, permease protein; hypothetical protein 3606468..3607232 Rhizobium leguminosarum bv. trifolii WSM1325 8014428 YP_002977355.1 CDS Rleg_3570 NC_012850.1 3607399 3607659 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ret:RHE_CH03529 transcriptional regulator protein; ArsR family transcriptional regulator 3607399..3607659 Rhizobium leguminosarum bv. trifolii WSM1325 8014429 YP_002977356.1 CDS Rleg_3571 NC_012850.1 3607866 3608039 R PFAM: protein of unknown function DUF465; KEGG: rec:RHECIAT_CH0003779 hypothetical protein; hypothetical protein complement(3607866..3608039) Rhizobium leguminosarum bv. trifolii WSM1325 8014430 YP_002977357.1 CDS Rleg_3572 NC_012850.1 3608268 3608471 D PFAM: protein of unknown function DUF465; KEGG: rec:RHECIAT_CH0003780 hypothetical protein; hypothetical protein 3608268..3608471 Rhizobium leguminosarum bv. trifolii WSM1325 8014431 YP_002977358.1 CDS Rleg_3573 NC_012850.1 3608490 3608984 D KEGG: rec:RHECIAT_CH0003781 phosphoribosylaminoimidazole carboxylase protein, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3608490..3608984 Rhizobium leguminosarum bv. trifolii WSM1325 8014432 YP_002977359.1 CDS Rleg_3574 NC_012850.1 3608981 3610057 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 3608981..3610057 Rhizobium leguminosarum bv. trifolii WSM1325 8014433 YP_002977360.1 CDS rpmJ NC_012850.1 3610221 3610346 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 3610221..3610346 Rhizobium leguminosarum bv. trifolii WSM1325 8014434 YP_002977361.1 CDS Rleg_3576 NC_012850.1 3610459 3611094 D PFAM: TPR repeat-containing protein; SMART: tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0003784 hypothetical protein; hypothetical protein 3610459..3611094 Rhizobium leguminosarum bv. trifolii WSM1325 8014435 YP_002977362.1 CDS Rleg_3577 NC_012850.1 3611204 3612280 D PFAM: alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0003785 probable esterase/hydrolase protein; alpha/beta hydrolase 3611204..3612280 Rhizobium leguminosarum bv. trifolii WSM1325 8015819 YP_002977363.1 CDS Rleg_3578 NC_012850.1 3612327 3613043 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase protein; short-chain dehydrogenase/reductase SDR complement(3612327..3613043) Rhizobium leguminosarum bv. trifolii WSM1325 8014436 YP_002977364.1 CDS Rleg_3579 NC_012850.1 3613172 3614014 D SMART: helix-turn-helix domain protein; KEGG: transcriptional regulator protein; helix-turn-helix domain-containing protein 3613172..3614014 Rhizobium leguminosarum bv. trifolii WSM1325 8014437 YP_002977365.1 CDS Rleg_3580 NC_012850.1 3614091 3615827 D KEGG: rec:RHECIAT_CH0003786 gamma-glutamyltranspeptidase protein; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 3614091..3615827 Rhizobium leguminosarum bv. trifolii WSM1325 8015820 YP_002977366.1 CDS Rleg_3581 NC_012850.1 3615999 3616958 D PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ret:RHE_CH03537 threonine dehydratase protein; pyridoxal-5'-phosphate-dependent protein beta subunit 3615999..3616958 Rhizobium leguminosarum bv. trifolii WSM1325 8014438 YP_002977367.1 CDS Rleg_3582 NC_012850.1 3617026 3617823 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SM_b20214 oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(3617026..3617823) Rhizobium leguminosarum bv. trifolii WSM1325 8014439 YP_002977368.1 CDS Rleg_3583 NC_012850.1 3617952 3618896 D PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mno:Mnod_1034 transcriptional regulator, AraC family; AraC family transcriptional regulator 3617952..3618896 Rhizobium leguminosarum bv. trifolii WSM1325 8015821 YP_002977369.1 CDS Rleg_3584 NC_012850.1 3619038 3619844 R KEGG: bra:BRADO2096 hypothetical protein; hypothetical protein complement(3619038..3619844) Rhizobium leguminosarum bv. trifolii WSM1325 8014440 YP_002977370.1 CDS Rleg_3585 NC_012850.1 3620075 3620971 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH03538 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3620075..3620971) Rhizobium leguminosarum bv. trifolii WSM1325 8014441 YP_002977371.1 CDS Rleg_3586 NC_012850.1 3621089 3621508 D PFAM: 4-oxalocrotonate tautomerase; KEGG: ret:RHE_CH03539 hypothetical protein; 4-oxalocrotonate tautomerase 3621089..3621508 Rhizobium leguminosarum bv. trifolii WSM1325 8014442 YP_002977372.1 CDS Rleg_3587 NC_012850.1 3621505 3621909 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: rec:RHECIAT_CH0003790 hypothetical protein; cupin 3621505..3621909 Rhizobium leguminosarum bv. trifolii WSM1325 8014443 YP_002977373.1 CDS Rleg_3588 NC_012850.1 3621906 3622463 D KEGG: rec:RHECIAT_CH0003791 hypothetical protein; hypothetical protein 3621906..3622463 Rhizobium leguminosarum bv. trifolii WSM1325 8014444 YP_002977374.1 CDS Rleg_3589 NC_012850.1 3622466 3623101 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0003792 probable amino-acid efflux protein; lysine exporter protein LysE/YggA complement(3622466..3623101) Rhizobium leguminosarum bv. trifolii WSM1325 8015822 YP_002977375.1 CDS Rleg_3590 NC_012850.1 3623241 3624680 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(3623241..3624680) Rhizobium leguminosarum bv. trifolii WSM1325 8014445 YP_002977376.1 CDS Rleg_3591 NC_012850.1 3624680 3625153 R PFAM: protein of unknown function DUF1036; KEGG: ret:RHE_CH03543 hypothetical protein; hypothetical protein complement(3624680..3625153) Rhizobium leguminosarum bv. trifolii WSM1325 8014446 YP_002977377.1 CDS Rleg_3592 NC_012850.1 3625346 3626155 D PFAM: N-formylglutamate amidohydrolase; KEGG: rec:RHECIAT_CH0003795 amidohydrolase protein; N-formylglutamate amidohydrolase 3625346..3626155 Rhizobium leguminosarum bv. trifolii WSM1325 8015823 YP_002977378.1 CDS Rleg_3593 NC_012850.1 3626171 3626476 D PFAM: protein of unknown function DUF1244; KEGG: ret:RHE_CH03545 hypothetical protein; hypothetical protein 3626171..3626476 Rhizobium leguminosarum bv. trifolii WSM1325 8014447 YP_002977379.1 CDS Rleg_3594 NC_012850.1 3626568 3626831 D KEGG: rec:RHECIAT_CH0003797 hypothetical protein; hypothetical protein 3626568..3626831 Rhizobium leguminosarum bv. trifolii WSM1325 8014448 YP_002977380.1 CDS Rleg_3595 NC_012850.1 3626996 3628792 R PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: rec:RHECIAT_CH0003800 hypothetical protein; hypothetical protein complement(3626996..3628792) Rhizobium leguminosarum bv. trifolii WSM1325 8015824 YP_002977381.1 CDS Rleg_3596 NC_012850.1 3629022 3630569 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: rec:RHECIAT_CH0003801 sigma-54-dependent transcriptional regulator (activator) protein; two component Fis family sigma54-specific transcriptional regulator complement(3629022..3630569) Rhizobium leguminosarum bv. trifolii WSM1325 8014449 YP_002977382.1 CDS Rleg_3597 NC_012850.1 3630776 3632629 D TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: rec:RHECIAT_CH0003802 oligoendopeptidase F protein; oligoendopeptidase 3630776..3632629 Rhizobium leguminosarum bv. trifolii WSM1325 8014450 YP_002977383.1 CDS Rleg_3598 NC_012850.1 3632996 3634150 D catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase 3632996..3634150 Rhizobium leguminosarum bv. trifolii WSM1325 8014451 YP_002977384.1 CDS Rleg_3599 NC_012850.1 3634147 3634776 D PFAM: aminotransferase class IV; KEGG: rec:RHECIAT_CH0003804 probable 4-amino-4-deoxychorismate lyase protein; hypothetical protein 3634147..3634776 Rhizobium leguminosarum bv. trifolii WSM1325 8014452 YP_002977385.1 CDS Rleg_3601 NC_012850.1 3635080 3635445 D KEGG: sml:Smlt1006 hypothetical protein; hypothetical protein 3635080..3635445 Rhizobium leguminosarum bv. trifolii WSM1325 8014454 YP_002977386.1 CDS Rleg_3602 NC_012850.1 3635641 3637092 D PFAM: homospermidine synthase; KEGG: rec:RHECIAT_CH0003806 homospermidine synthase protein; homospermidine synthase 3635641..3637092 Rhizobium leguminosarum bv. trifolii WSM1325 8014455 YP_002977387.1 CDS Rleg_3603 NC_012850.1 3637264 3637632 D KEGG: ret:RHE_CH03554 outer membrane lipoprotein; outer membrane lipoprotein 3637264..3637632 Rhizobium leguminosarum bv. trifolii WSM1325 8014456 YP_002977388.1 CDS Rleg_3604 NC_012850.1 3637665 3637985 D KEGG: rec:RHECIAT_CH0003808 hypothetical protein; hypothetical protein 3637665..3637985 Rhizobium leguminosarum bv. trifolii WSM1325 8014457 YP_002977389.1 CDS Rleg_3605 NC_012850.1 3638159 3640132 D PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: ret:RHE_CH03555 5'-nucleotidase protein; 5'-nucleotidase domain protein 3638159..3640132 Rhizobium leguminosarum bv. trifolii WSM1325 8015825 YP_002977390.1 CDS hemH NC_012850.1 3640239 3641291 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3640239..3641291 Rhizobium leguminosarum bv. trifolii WSM1325 8014458 YP_002977391.1 CDS Rleg_3607 NC_012850.1 3641470 3642510 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: rec:RHECIAT_CH0003811 membrane protease protein; hypothetical protein 3641470..3642510 Rhizobium leguminosarum bv. trifolii WSM1325 8014459 YP_002977392.1 CDS Rleg_3608 NC_012850.1 3642514 3642969 D PFAM: protein of unknown function DUF107; KEGG: rec:RHECIAT_CH0003812 hypothetical protein; hypothetical protein 3642514..3642969 Rhizobium leguminosarum bv. trifolii WSM1325 8014460 YP_002977393.1 CDS Rleg_3609 NC_012850.1 3642998 3643993 R KEGG: ret:RHE_CH03559 polysialic acid capsule expression protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein; KpsF/GutQ family protein complement(3642998..3643993) Rhizobium leguminosarum bv. trifolii WSM1325 8014461 YP_002977394.1 CDS Rleg_3610 NC_012850.1 3644169 3645710 D KEGG: ret:RHE_CH03560 hypothetical protein; hypothetical protein 3644169..3645710 Rhizobium leguminosarum bv. trifolii WSM1325 8015826 YP_002977395.1 CDS Rleg_3611 NC_012850.1 3645780 3646667 R KEGG: rec:RHECIAT_CH0003815 UTP--glucose-1-phosphate uridylyltransferase protein; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase complement(3645780..3646667) Rhizobium leguminosarum bv. trifolii WSM1325 8014462 YP_002977396.1 CDS Rleg_3612 NC_012850.1 3646873 3648096 D TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding domain 1 protein; KEGG: rec:RHECIAT_CH0003816 probable membrane-bound lytic murein transglycosylase protein; lytic murein transglycosylase 3646873..3648096 Rhizobium leguminosarum bv. trifolii WSM1325 8014463 YP_002977397.1 CDS Rleg_3613 NC_012850.1 3648393 3649607 D PFAM: protein of unknown function DUF459; KEGG: rec:RHECIAT_CH0003817 hypothetical protein; hypothetical protein 3648393..3649607 Rhizobium leguminosarum bv. trifolii WSM1325 8014464 YP_002977398.1 CDS Rleg_3614 NC_012850.1 3649642 3650301 R KEGG: rec:RHECIAT_CH0003818 hypothetical protein; hypothetical protein complement(3649642..3650301) Rhizobium leguminosarum bv. trifolii WSM1325 8014465 YP_002977399.1 CDS gltD NC_012850.1 3650547 3652022 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(3650547..3652022) Rhizobium leguminosarum bv. trifolii WSM1325 8015827 YP_002977400.1 CDS Rleg_3616 NC_012850.1 3652228 3656952 R PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: ret:RHE_CH03566 glutamate synthase large subunit protein; glutamate synthase complement(3652228..3656952) Rhizobium leguminosarum bv. trifolii WSM1325 8014466 YP_002977401.1 CDS Rleg_3617 NC_012850.1 3657492 3658544 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rec:RHECIAT_CH0003822 low-specificity L-threonine aldolase protein; threonine aldolase 3657492..3658544 Rhizobium leguminosarum bv. trifolii WSM1325 8014467 YP_002977402.1 CDS Rleg_3618 NC_012850.1 3658600 3659454 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003823 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(3658600..3659454) Rhizobium leguminosarum bv. trifolii WSM1325 8014468 YP_002977403.1 CDS Rleg_3619 NC_012850.1 3659515 3660549 D PFAM: Bile acid:sodium symporter; KEGG: ret:RHE_CH03570 Na+/bile acid cotransporter protein; bile acid:sodium symporter 3659515..3660549 Rhizobium leguminosarum bv. trifolii WSM1325 8014469 YP_002977404.1 CDS Rleg_3620 NC_012850.1 3660712 3661182 R PFAM: heat shock protein Hsp20; KEGG: ret:RHE_CH03571 molecular chaperone small heat shock protein; heat shock protein Hsp20 complement(3660712..3661182) Rhizobium leguminosarum bv. trifolii WSM1325 8014470 YP_002977405.1 CDS Rleg_3621 NC_012850.1 3661589 3662563 D PFAM: alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0003826 lysophospholipase protein; lysophospholipase 3661589..3662563 Rhizobium leguminosarum bv. trifolii WSM1325 8014471 YP_002977406.1 CDS Rleg_3622 NC_012850.1 3662612 3663385 R TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: ret:RHE_CH03573 monophosphatase protein; histidinol-phosphate phosphatase complement(3662612..3663385) Rhizobium leguminosarum bv. trifolii WSM1325 8014472 YP_002977407.1 CDS Rleg_3623 NC_012850.1 3663663 3664544 R PFAM: N-formylglutamate amidohydrolase; KEGG: rec:RHECIAT_CH0003837 probable N-formylglutamate amidohydrolase protein; N-formylglutamate amidohydrolase complement(3663663..3664544) Rhizobium leguminosarum bv. trifolii WSM1325 8014473 YP_002977408.1 CDS Rleg_3624 NC_012850.1 3664732 3665094 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0003838 probable two-component response regulator protein; response regulator receiver protein 3664732..3665094 Rhizobium leguminosarum bv. trifolii WSM1325 8014474 YP_002977409.1 CDS Rleg_3625 NC_012850.1 3665438 3665632 D hypothetical protein 3665438..3665632 Rhizobium leguminosarum bv. trifolii WSM1325 8014476 YP_002977410.1 CDS Rleg_3626 NC_012850.1 3665756 3666250 D KEGG: rec:RHECIAT_CH0003842 hypothetical protein; hypothetical protein 3665756..3666250 Rhizobium leguminosarum bv. trifolii WSM1325 8014477 YP_002977411.1 CDS Rleg_3627 NC_012850.1 3666405 3667130 R KEGG: ret:RHE_CH03580 hypothetical protein; hypothetical protein complement(3666405..3667130) Rhizobium leguminosarum bv. trifolii WSM1325 8014478 YP_002977412.1 CDS Rleg_3628 NC_012850.1 3667363 3667875 D PFAM: MgtC/SapB transporter; KEGG: smd:Smed_0348 MgtC/SapB transporter; MgtC/SapB transporter 3667363..3667875 Rhizobium leguminosarum bv. trifolii WSM1325 8014479 YP_002977413.1 CDS Rleg_3629 NC_012850.1 3667936 3668160 R KEGG: rec:RHECIAT_CH0003844 hypothetical protein; hypothetical protein complement(3667936..3668160) Rhizobium leguminosarum bv. trifolii WSM1325 8015828 YP_002977414.1 CDS Rleg_3630 NC_012850.1 3668186 3668413 R KEGG: rec:RHECIAT_CH0003845 hypothetical protein; hypothetical protein complement(3668186..3668413) Rhizobium leguminosarum bv. trifolii WSM1325 8014480 YP_002977415.1 CDS Rleg_3631 NC_012850.1 3668667 3668774 D hypothetical protein 3668667..3668774 Rhizobium leguminosarum bv. trifolii WSM1325 8014481 YP_002977416.1 CDS Rleg_3632 NC_012850.1 3668771 3669862 D PFAM: protein of unknown function DUF475; Integral membrane protein TerC; KEGG: rec:RHECIAT_CH0003846 hypothetical protein; hypothetical protein 3668771..3669862 Rhizobium leguminosarum bv. trifolii WSM1325 8014482 YP_002977417.1 CDS Rleg_3633 NC_012850.1 3669967 3670137 R KEGG: smd:Smed_4254 hypothetical protein; hypothetical protein complement(3669967..3670137) Rhizobium leguminosarum bv. trifolii WSM1325 8014483 YP_002977418.1 CDS Rleg_3634 NC_012850.1 3670294 3671811 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: ret:RHE_CH03582 hypothetical protein; hypothetical protein complement(3670294..3671811) Rhizobium leguminosarum bv. trifolii WSM1325 8015829 YP_002977419.1 CDS Rleg_3635 NC_012850.1 3671900 3672391 R KEGG: ret:RHE_CH03583 hypothetical protein; hypothetical protein complement(3671900..3672391) Rhizobium leguminosarum bv. trifolii WSM1325 8014484 YP_002977420.1 CDS Rleg_3636 NC_012850.1 3672388 3673332 R PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0003850 hypothetical protein; hypothetical protein complement(3672388..3673332) Rhizobium leguminosarum bv. trifolii WSM1325 8014485 YP_002977421.1 CDS Rleg_3637 NC_012850.1 3673711 3674757 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0003851 probable iron ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(3673711..3674757) Rhizobium leguminosarum bv. trifolii WSM1325 8014486 YP_002977422.1 CDS Rleg_3639 NC_012850.1 3675694 3675864 D hypothetical protein 3675694..3675864 Rhizobium leguminosarum bv. trifolii WSM1325 8014488 YP_002977423.1 CDS Rleg_3641 NC_012850.1 3676368 3677237 R PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: ornithine carbamoyltransferase protein ; K00611 ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase carbamoyl-P binding protein complement(3676368..3677237) Rhizobium leguminosarum bv. trifolii WSM1325 8014490 YP_002977424.1 CDS Rleg_3642 NC_012850.1 3677674 3679542 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; tetratricopeptide TPR_2 repeat protein; SMART: tetratricopeptide domain protein; KEGG: ret:RHE_CH03586 adenylate cyclase protein; adenylate/guanylate cyclase 3677674..3679542 Rhizobium leguminosarum bv. trifolii WSM1325 8014491 YP_002977425.1 CDS Rleg_3643 NC_012850.1 3679636 3680313 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ret:RHE_CH03587 two-component response regulator protein; transcriptional regulator 3679636..3680313 Rhizobium leguminosarum bv. trifolii WSM1325 8014492 YP_002977426.1 CDS Rleg_3644 NC_012850.1 3680310 3681692 D PFAM: Two-component sensor kinase domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH03588 two-component sensor histidine kinase protein; histidine kinase 3680310..3681692 Rhizobium leguminosarum bv. trifolii WSM1325 8014493 YP_002977427.1 CDS Rleg_3645 NC_012850.1 3681852 3685178 D PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: rec:RHECIAT_CH0003856 transglutaminase-like protein; SNP /replace=C; transglutaminase 3681852..3685178 Rhizobium leguminosarum bv. trifolii WSM1325 8014494 YP_002977428.1 CDS Rleg_3646 NC_012850.1 3685217 3687634 D PFAM: protein of unknown function DUF404; protein of unknown function DUF403; protein of unknown function DUF407; KEGG: rec:RHECIAT_CH0003857 hypothetical protein; hypothetical protein 3685217..3687634 Rhizobium leguminosarum bv. trifolii WSM1325 8014495 YP_002977429.1 CDS Rleg_3647 NC_012850.1 3687640 3688518 D PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: rec:RHECIAT_CH0003858 transglutaminase-like protein; transglutaminase 3687640..3688518 Rhizobium leguminosarum bv. trifolii WSM1325 8015830 YP_002977430.1 CDS Rleg_3648 NC_012850.1 3688632 3689834 D KEGG: rec:RHECIAT_CH0003859 hypothetical protein; hypothetical protein 3688632..3689834 Rhizobium leguminosarum bv. trifolii WSM1325 8014496 YP_002977431.1 CDS Rleg_3649 NC_012850.1 3690110 3692572 D KEGG: rec:RHECIAT_CH0003861 glycogen phosphorylase protein; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 3690110..3692572 Rhizobium leguminosarum bv. trifolii WSM1325 8014497 YP_002977432.1 CDS Rleg_3650 NC_012850.1 3692569 3694776 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 3692569..3694776 Rhizobium leguminosarum bv. trifolii WSM1325 8014498 YP_002977433.1 CDS glgC NC_012850.1 3694796 3696058 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 3694796..3696058 Rhizobium leguminosarum bv. trifolii WSM1325 8014499 YP_002977434.1 CDS glgA NC_012850.1 3696062 3697504 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 3696062..3697504 Rhizobium leguminosarum bv. trifolii WSM1325 8015831 YP_002977435.1 CDS Rleg_3653 NC_012850.1 3697511 3699142 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 3697511..3699142 Rhizobium leguminosarum bv. trifolii WSM1325 8014500 YP_002977436.1 CDS Rleg_3654 NC_012850.1 3699155 3701131 D KEGG: rec:RHECIAT_CH0003866 glycosyl hydrolase (glycogen debranching) protein; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 3699155..3701131 Rhizobium leguminosarum bv. trifolii WSM1325 8014501 YP_002977437.1 CDS Rleg_3655 NC_012850.1 3701222 3701710 D PFAM: MaoC domain protein dehydratase; KEGG: rec:RHECIAT_CH0003867 dehydratase nodulation protein; MaoC domain-containing protein dehydratase 3701222..3701710 Rhizobium leguminosarum bv. trifolii WSM1325 8014502 YP_002977438.1 CDS Rleg_3656 NC_012850.1 3701725 3702123 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0003868 probable glyoxylase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3701725..3702123) Rhizobium leguminosarum bv. trifolii WSM1325 8014503 YP_002977439.1 CDS Rleg_3657 NC_012850.1 3702168 3702716 R TIGRFAM: sarcosine oxidase, gamma subunit family; PFAM: Sarcosine oxidase gamma subunit; KEGG: ret:RHE_CH03600 sarcosine oxidase gamma subunit protein; sarcosine oxidase subunit gamma complement(3702168..3702716) Rhizobium leguminosarum bv. trifolii WSM1325 8015832 YP_002977440.1 CDS Rleg_3658 NC_012850.1 3702709 3705702 R TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; FAD dependent oxidoreductase; KEGG: ret:RHE_CH03601 sarcosine oxidase alpha subunit protein; sarcosine oxidase subunit alpha complement(3702709..3705702) Rhizobium leguminosarum bv. trifolii WSM1325 8014504 YP_002977441.1 CDS Rleg_3659 NC_012850.1 3705699 3706040 R TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: ret:RHE_CH03602 sarcosine oxidase delta subunit protein; sarcosine oxidase subunit delta complement(3705699..3706040) Rhizobium leguminosarum bv. trifolii WSM1325 8014505 YP_002977442.1 CDS Rleg_3660 NC_012850.1 3706053 3706454 R KEGG: hypothetical protein; hypothetical protein complement(3706053..3706454) Rhizobium leguminosarum bv. trifolii WSM1325 8014506 YP_002977443.1 CDS Rleg_3661 NC_012850.1 3706454 3707707 R TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_CH03603 sarcosine oxidase beta subunit protein; sarcosine oxidase subunit beta complement(3706454..3707707) Rhizobium leguminosarum bv. trifolii WSM1325 8014507 YP_002977444.1 CDS Rleg_3662 NC_012850.1 3707991 3708992 D KEGG: ret:RHE_CH03604 hypothetical protein; hypothetical protein 3707991..3708992 Rhizobium leguminosarum bv. trifolii WSM1325 8014508 YP_002977445.1 CDS Rleg_3663 NC_012850.1 3708998 3711169 R PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH03605 adenylate cyclase protein; adenylate/guanylate cyclase complement(3708998..3711169) Rhizobium leguminosarum bv. trifolii WSM1325 8014509 YP_002977446.1 CDS rpsU NC_012850.1 3711605 3711820 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3711605..3711820 Rhizobium leguminosarum bv. trifolii WSM1325 8014510 YP_002977447.1 CDS Rleg_3665 NC_012850.1 3711957 3712826 D PFAM: TPR repeat-containing protein; tetratricopeptide TPR_2 repeat protein; SMART: tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0003877 probable O-linked GlcNAc transferase protein; hypothetical protein 3711957..3712826 Rhizobium leguminosarum bv. trifolii WSM1325 8014511 YP_002977448.1 CDS Rleg_3666 NC_012850.1 3713317 3714969 D PFAM: HWE histidine kinase; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH03609 two-component sensor histidine kinase protein; signal transduction histidine kinase 3713317..3714969 Rhizobium leguminosarum bv. trifolii WSM1325 8014512 YP_002977449.1 CDS Rleg_3667 NC_012850.1 3715083 3715565 D PFAM: protein of unknown function DUF992; KEGG: rec:RHECIAT_CH0003879 hypothetical protein; hypothetical protein 3715083..3715565 Rhizobium leguminosarum bv. trifolii WSM1325 8015833 YP_002977450.1 CDS Rleg_3668 NC_012850.1 3715649 3717043 R PFAM: NAD(P) transhydrogenase beta subunit; KEGG: rec:RHECIAT_CH0003880 NAD(P)(+) transhydrogenase (AB-specific) protein, beta subunit; NAD(P)(+) transhydrogenase complement(3715649..3717043) Rhizobium leguminosarum bv. trifolii WSM1325 8014513 YP_002977451.1 CDS Rleg_3669 NC_012850.1 3717051 3717449 R KEGG: rec:RHECIAT_CH0003881 NAD(P)(+) transhydrogenase (AB-specific) protein, alpha subunit; NAD(P)(+) transhydrogenase (AB-specific) protein subunit alpha complement(3717051..3717449) Rhizobium leguminosarum bv. trifolii WSM1325 8014514 YP_002977452.1 CDS Rleg_3670 NC_012850.1 3717449 3718597 R PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rec:RHECIAT_CH0003882 NAD(P)(+) transhydrogenase (AB-specific) protein, alpha subunit; NAD(P)(+) transhydrogenase complement(3717449..3718597) Rhizobium leguminosarum bv. trifolii WSM1325 8014515 YP_002977453.1 CDS Rleg_3671 NC_012850.1 3718754 3718978 R PFAM: aa3 type cytochrome C oxidase subunit IV; KEGG: ret:RHE_CH03614 hypothetical protein; aa3 type cytochrome C oxidase subunit IV complement(3718754..3718978) Rhizobium leguminosarum bv. trifolii WSM1325 8014516 YP_002977454.1 CDS Rleg_3672 NC_012850.1 3719220 3719972 R KEGG: ret:RHE_CH03615 hypothetical protein; hypothetical protein complement(3719220..3719972) Rhizobium leguminosarum bv. trifolii WSM1325 8014517 YP_002977455.1 CDS Rleg_3673 NC_012850.1 3720115 3722418 R KEGG: rec:RHECIAT_CH0003885 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(3720115..3722418) Rhizobium leguminosarum bv. trifolii WSM1325 8014518 YP_002977456.1 CDS Rleg_3674 NC_012850.1 3722747 3723286 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ret:RHE_CH03617 TRAP mannitol/C4-dicarboxylate transporter, permease protein; tripartite ATP-independent periplasmic transporter DctQ component 3722747..3723286 Rhizobium leguminosarum bv. trifolii WSM1325 8015834 YP_002977457.1 CDS Rleg_3675 NC_012850.1 3723308 3724801 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ret:RHE_CH03618 TRAP mannitol/C4-dicarboxylate transporter, permease protein; TRAP dicarboxylate transporter subunit DctM 3723308..3724801 Rhizobium leguminosarum bv. trifolii WSM1325 8014519 YP_002977458.1 CDS Rleg_3676 NC_012850.1 3725119 3726225 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ret:RHE_CH03619 TRAP mannitol/C4-dicarboxylate transporter, substrate-binding protein; TRAP dicarboxylate transporter- DctP subunit complement(3725119..3726225) Rhizobium leguminosarum bv. trifolii WSM1325 8014520 YP_002977459.1 CDS Rleg_3677 NC_012850.1 3726519 3727298 D PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: rec:RHECIAT_CH0003889 probable glutamine amidotransferase protein; gamma-glutamyl-gamma-aminobutyrate hydrolase 3726519..3727298 Rhizobium leguminosarum bv. trifolii WSM1325 8014521 YP_002977460.1 CDS Rleg_3678 NC_012850.1 3727494 3728450 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rec:RHECIAT_CH0003890 probable oxidoreductase/dehydrogenase protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit complement(3727494..3728450) Rhizobium leguminosarum bv. trifolii WSM1325 8014522 YP_002977461.1 CDS Rleg_3679 NC_012850.1 3728480 3729502 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_CH03622 LacI family transcription regulator; LacI family transcriptional regulator complement(3728480..3729502) Rhizobium leguminosarum bv. trifolii WSM1325 8014523 YP_002977462.1 CDS Rleg_3680 NC_012850.1 3729622 3730134 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_CH03623 MarR family transcriptional regulator; MarR family transcriptional regulator complement(3729622..3730134) Rhizobium leguminosarum bv. trifolii WSM1325 8015835 YP_002977463.1 CDS Rleg_3681 NC_012850.1 3730220 3731008 D PFAM: creatininase; KEGG: rec:RHECIAT_CH0003893 creatininase protein; creatininase 3730220..3731008 Rhizobium leguminosarum bv. trifolii WSM1325 8014524 YP_002977464.1 CDS Rleg_3682 NC_012850.1 3731159 3732262 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ret:RHE_CH03625 cobalamin synthesis protein P47K family; cobalamin synthesis protein P47K 3731159..3732262 Rhizobium leguminosarum bv. trifolii WSM1325 8014525 YP_002977465.1 CDS Rleg_3683 NC_012850.1 3732262 3733251 D SMART: WD-40 repeat protein; KEGG: ret:RHE_CH03626 hypothetical protein; WD-40 repeat-containing protein 3732262..3733251 Rhizobium leguminosarum bv. trifolii WSM1325 8015836 YP_002977466.1 CDS Rleg_3684 NC_012850.1 3733267 3733761 D PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_4578 GCN5-related N-acetyltransferase (GNAT); N-acetyltransferase GCN5 3733267..3733761 Rhizobium leguminosarum bv. trifolii WSM1325 8014526 YP_002977467.1 CDS Rleg_3685 NC_012850.1 3733884 3734702 D KEGG: rec:RHECIAT_CH0003896 serine acetyltransferase protein; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein; transferase hexapeptide repeat containing protein; serine O-acetyltransferase 3733884..3734702 Rhizobium leguminosarum bv. trifolii WSM1325 8014527 YP_002977468.1 CDS Rleg_3686 NC_012850.1 3734733 3735890 R KEGG: rec:RHECIAT_CH0003897 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3734733..3735890) Rhizobium leguminosarum bv. trifolii WSM1325 8015837 YP_002977469.1 CDS Rleg_3687 NC_012850.1 3736046 3737074 R PFAM: beta-lactamase; KEGG: sme:SM_b20965 exported enzyme, 6-aminohexanoate-dimer hydrolase protein; beta-lactamase complement(3736046..3737074) Rhizobium leguminosarum bv. trifolii WSM1325 8014528 YP_002977470.1 CDS Rleg_3688 NC_012850.1 3737326 3737916 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003898 acetyltransferase protein; N-acetyltransferase GCN5 complement(3737326..3737916) Rhizobium leguminosarum bv. trifolii WSM1325 8014529 YP_002977471.1 CDS Rleg_3689 NC_012850.1 3738011 3739144 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rec:RHECIAT_CH0003899 probable ornithine decarboxylase protein; Orn/DAP/Arg decarboxylase 2 complement(3738011..3739144) Rhizobium leguminosarum bv. trifolii WSM1325 8014530 YP_002977472.1 CDS Rleg_3690 NC_012850.1 3739671 3740564 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH03630 LysR family transcriptional regulator; LysR family transcriptional regulator 3739671..3740564 Rhizobium leguminosarum bv. trifolii WSM1325 8014531 YP_002977473.1 CDS Rleg_3691 NC_012850.1 3740703 3741344 D PFAM: protein of unknown function DUF1007; KEGG: rec:RHECIAT_CH0003901 hypothetical protein; hypothetical protein 3740703..3741344 Rhizobium leguminosarum bv. trifolii WSM1325 8014532 YP_002977474.1 CDS Rleg_3692 NC_012850.1 3741338 3742414 D PFAM: high-affinity nickel-transporter; KEGG: rec:RHECIAT_CH0003902 ABC transporter, permease protein; high-affinity nickel-transporter 3741338..3742414 Rhizobium leguminosarum bv. trifolii WSM1325 8015838 YP_002977475.1 CDS Rleg_3693 NC_012850.1 3742417 3742623 R KEGG: rec:RHECIAT_CH0003903 hypothetical protein; hypothetical protein complement(3742417..3742623) Rhizobium leguminosarum bv. trifolii WSM1325 8014533 YP_002977476.1 CDS Rleg_3694 NC_012850.1 3742620 3743315 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003904 probable acetyltransferase protein; N-acetyltransferase GCN5 complement(3742620..3743315) Rhizobium leguminosarum bv. trifolii WSM1325 8014534 YP_002977477.1 CDS Rleg_3695 NC_012850.1 3743461 3744180 R PFAM: protein of unknown function DUF533; KEGG: rec:RHECIAT_CH0003905 hypothetical protein; hypothetical protein complement(3743461..3744180) Rhizobium leguminosarum bv. trifolii WSM1325 8015839 YP_002977478.1 CDS Rleg_3696 NC_012850.1 3744290 3744928 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(3744290..3744928) Rhizobium leguminosarum bv. trifolii WSM1325 8014535 YP_002977479.1 CDS Rleg_3697 NC_012850.1 3745083 3745571 D PFAM: adenylate cyclase; KEGG: ret:RHE_CH03636 hypothetical protein; adenylate cyclase 3745083..3745571 Rhizobium leguminosarum bv. trifolii WSM1325 8014536 YP_002977480.1 CDS Rleg_3698 NC_012850.1 3745549 3746457 D PFAM: CHAD domain containing protein; KEGG: ret:RHE_CH03637 hypothetical protein; CHAD domain-containing protein 3745549..3746457 Rhizobium leguminosarum bv. trifolii WSM1325 8015840 YP_002977481.1 CDS Rleg_3699 NC_012850.1 3746519 3747448 D PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: rec:RHECIAT_CH0003909 probable rhodanese-related sulfurtransferase protein; rhodanese domain-containing protein 3746519..3747448 Rhizobium leguminosarum bv. trifolii WSM1325 8014537 YP_002977482.1 CDS Rleg_3700 NC_012850.1 3747487 3749697 R KEGG: ret:RHE_CH03639 sensory box/GGDEF family protein (nitrogen fixation positive activator protein-like); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(3747487..3749697) Rhizobium leguminosarum bv. trifolii WSM1325 8014538 YP_002977483.1 CDS Rleg_3701 NC_012850.1 3749922 3751295 R KEGG: rec:RHECIAT_CH0003911 beta-glucosidase protein; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; beta-galactosidase complement(3749922..3751295) Rhizobium leguminosarum bv. trifolii WSM1325 8014539 YP_002977484.1 CDS Rleg_3702 NC_012850.1 3751534 3751938 D PFAM: DoxX family protein; KEGG: rec:RHECIAT_CH0003912 hypothetical conserved membrane protein; DoxX family protein 3751534..3751938 Rhizobium leguminosarum bv. trifolii WSM1325 8014540 YP_002977485.1 CDS Rleg_3703 NC_012850.1 3752116 3753303 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH03642 oxidoreductase protein; oxidoreductase domain-containing protein complement(3752116..3753303) Rhizobium leguminosarum bv. trifolii WSM1325 8014541 YP_002977486.1 CDS Rleg_3704 NC_012850.1 3753527 3754579 R PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: rec:RHECIAT_CH0003914 xylose isomerase domain protein; xylose isomerase complement(3753527..3754579) Rhizobium leguminosarum bv. trifolii WSM1325 8014542 YP_002977487.1 CDS Rleg_3705 NC_012850.1 3754831 3755778 R KEGG: rec:RHECIAT_CH0003915 probable sugar ABC transporter, substrate-binding protein; sugar ABC transporter substrate-binding protein complement(3754831..3755778) Rhizobium leguminosarum bv. trifolii WSM1325 8014543 YP_002977488.1 CDS Rleg_3706 NC_012850.1 3755847 3756851 R PFAM: inner-membrane translocator; KEGG: ret:RHE_CH03645 sugar ABC transporter, permease protein; inner-membrane translocator complement(3755847..3756851) Rhizobium leguminosarum bv. trifolii WSM1325 8014544 YP_002977489.1 CDS Rleg_3707 NC_012850.1 3756930 3758456 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03646 sugar ABC transporter, ATP-binding protein; ABC transporter complement(3756930..3758456) Rhizobium leguminosarum bv. trifolii WSM1325 8014545 YP_002977490.1 CDS Rleg_3708 NC_012850.1 3758627 3759658 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ret:RHE_CH03647 LacI family transcription regulator; LacI family transcriptional regulator 3758627..3759658 Rhizobium leguminosarum bv. trifolii WSM1325 8014546 YP_002977491.1 CDS Rleg_3709 NC_012850.1 3759847 3761157 R catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase complement(3759847..3761157) Rhizobium leguminosarum bv. trifolii WSM1325 8014547 YP_002977492.1 CDS Rleg_3710 NC_012850.1 3761373 3762827 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: rec:RHECIAT_CH0003920 xylulose kinase protein; xylulokinase complement(3761373..3762827) Rhizobium leguminosarum bv. trifolii WSM1325 8014548 YP_002977493.1 CDS Rleg_3711 NC_012850.1 3762849 3763871 R PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ret:RHE_CH03650 LacI family transcription regulator; LacI family transcriptional regulator complement(3762849..3763871) Rhizobium leguminosarum bv. trifolii WSM1325 8014549 YP_002977494.1 CDS Rleg_3712 NC_012850.1 3764057 3765655 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0003922 probable multidrug efflux transporter, permease protein; EmrB/QacA subfamily drug resistance transporter complement(3764057..3765655) Rhizobium leguminosarum bv. trifolii WSM1325 8014550 YP_002977495.1 CDS Rleg_3713 NC_012850.1 3765683 3766897 R PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0003923 protein secretion protein, HlyD family; secretion protein HlyD family protein complement(3765683..3766897) Rhizobium leguminosarum bv. trifolii WSM1325 8014551 YP_002977496.1 CDS Rleg_3714 NC_012850.1 3767049 3767729 D PFAM: regulatory protein TetR; KEGG: ret:RHE_CH03653 TetR family transcriptional regulator; TetR family transcriptional regulator 3767049..3767729 Rhizobium leguminosarum bv. trifolii WSM1325 8014552 YP_002977497.1 CDS Rleg_3715 NC_012850.1 3767937 3768776 D PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0003925 probable transcriptional regulator protein; SNP /replace=T; AraC family transcriptional regulator 3767937..3768776 Rhizobium leguminosarum bv. trifolii WSM1325 8014553 YP_002977498.1 CDS Rleg_3716 NC_012850.1 3768980 3769735 D PFAM: Integral membrane protein TerC; KEGG: ret:RHE_CH03655 TerC family transporter protein; integral membrane protein TerC 3768980..3769735 Rhizobium leguminosarum bv. trifolii WSM1325 8014554 YP_002977499.1 CDS gltX NC_012850.1 3769981 3771447 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3769981..3771447 Rhizobium leguminosarum bv. trifolii WSM1325 8014555 YP_002977500.1 CDS lysS NC_012850.1 3771470 3772966 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 3771470..3772966 Rhizobium leguminosarum bv. trifolii WSM1325 8014556 YP_002977501.1 CDS Rleg_3719 NC_012850.1 3773078 3773830 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_2398 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3773078..3773830) Rhizobium leguminosarum bv. trifolii WSM1325 8014557 YP_002977502.1 CDS Rleg_3720 NC_012850.1 3773963 3774853 D PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cak:Caul_2399 AraC family transcriptional regulator; AraC family transcriptional regulator 3773963..3774853 Rhizobium leguminosarum bv. trifolii WSM1325 8014558 YP_002977503.1 CDS Rleg_3721 NC_012850.1 3774866 3775594 R KEGG: rec:RHECIAT_CH0003929 hypothetical protein; hypothetical protein complement(3774866..3775594) Rhizobium leguminosarum bv. trifolii WSM1325 8014559 YP_002977504.1 CDS Rleg_3722 NC_012850.1 3775773 3776681 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003930 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 3775773..3776681 Rhizobium leguminosarum bv. trifolii WSM1325 8014560 YP_002977505.1 CDS Rleg_3723 NC_012850.1 3776798 3777958 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH03660 spermidine/putrescine ABC transporter, substrate-binding protein; extracellular solute-binding protein 3776798..3777958 Rhizobium leguminosarum bv. trifolii WSM1325 8014561 YP_002977506.1 CDS Rleg_3724 NC_012850.1 3778174 3779160 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003932 probable spermidine/putrescine ABC transporter, ATP-binding protein; ABC transporter 3778174..3779160 Rhizobium leguminosarum bv. trifolii WSM1325 8014562 YP_002977507.1 CDS Rleg_3725 NC_012850.1 3779157 3780122 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003933 probable spermidine/putrescine ABC transporter, permease protein; ABC transporter permease 3779157..3780122 Rhizobium leguminosarum bv. trifolii WSM1325 8014563 YP_002977508.1 CDS Rleg_3726 NC_012850.1 3780112 3780924 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003934 probable spermidine/putrescine ABC transporter, permease protein; ABC transporter permease 3780112..3780924 Rhizobium leguminosarum bv. trifolii WSM1325 8014564 YP_002977509.1 CDS Rleg_3727 NC_012850.1 3780939 3782366 D catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 3780939..3782366 Rhizobium leguminosarum bv. trifolii WSM1325 8014565 YP_002977510.1 CDS Rleg_3728 NC_012850.1 3782517 3782690 D PFAM: protein of unknown function DUF1328; KEGG: rec:RHECIAT_CH0003936 hypothetical protein; hypothetical protein 3782517..3782690 Rhizobium leguminosarum bv. trifolii WSM1325 8014566 YP_002977511.1 CDS Rleg_3729 NC_012850.1 3782770 3783429 R KEGG: hypothetical protein; hypothetical protein complement(3782770..3783429) Rhizobium leguminosarum bv. trifolii WSM1325 8014567 YP_002977512.1 CDS Rleg_3730 NC_012850.1 3783589 3784965 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: two-component sensor histidine kinase protein; histidine kinase complement(3783589..3784965) Rhizobium leguminosarum bv. trifolii WSM1325 8014568 YP_002977513.1 CDS Rleg_3731 NC_012850.1 3784962 3785702 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: two-component response regulator protein; transcriptional regulator complement(3784962..3785702) Rhizobium leguminosarum bv. trifolii WSM1325 8014569 YP_002977514.1 CDS Rleg_3732 NC_012850.1 3785937 3786215 R hypothetical protein complement(3785937..3786215) Rhizobium leguminosarum bv. trifolii WSM1325 8014570 YP_002977515.1 CDS Rleg_3733 NC_012850.1 3786410 3786892 R hypothetical protein complement(3786410..3786892) Rhizobium leguminosarum bv. trifolii WSM1325 8014571 YP_002977516.1 CDS Rleg_3734 NC_012850.1 3787038 3787484 R PFAM: DoxX family protein; KEGG: rec:RHECIAT_CH0003937 hypothetical protein; DoxX family protein complement(3787038..3787484) Rhizobium leguminosarum bv. trifolii WSM1325 8015841 YP_002977517.1 CDS Rleg_3735 NC_012850.1 3787537 3788205 R PFAM: protein of unknown function DUF1345; KEGG: rec:RHECIAT_CH0003938 hypothetical protein; hypothetical protein complement(3787537..3788205) Rhizobium leguminosarum bv. trifolii WSM1325 8014572 YP_002977518.1 CDS Rleg_3736 NC_012850.1 3788298 3789263 R KEGG: ret:RHE_CH03667 transaldolase B; TIGRFAM: transaldolase; PFAM: transaldolase; transaldolase B complement(3788298..3789263) Rhizobium leguminosarum bv. trifolii WSM1325 8014573 YP_002977519.1 CDS Rleg_3737 NC_012850.1 3789691 3790668 D PFAM: sugar-binding domain protein; KEGG: rec:RHECIAT_CH0003941 probable transcriptional regulator protein; DeoR family transcriptional regulator 3789691..3790668 Rhizobium leguminosarum bv. trifolii WSM1325 8015842 YP_002977520.1 CDS Rleg_3738 NC_012850.1 3790675 3791190 D KEGG: rec:RHECIAT_CH0003942 hypothetical protein; hypothetical protein 3790675..3791190 Rhizobium leguminosarum bv. trifolii WSM1325 8014574 YP_002977521.1 CDS Rleg_3739 NC_012850.1 3791205 3792077 R KEGG: rec:RHECIAT_CH0003943 probable 6-O-methylguanine-DNA methyltransferase (DNA repair) protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SMART: helix-turn-helix- domain containing protein AraC type; methylated-DNA--protein-cysteine methyltransferase complement(3791205..3792077) Rhizobium leguminosarum bv. trifolii WSM1325 8014575 YP_002977522.1 CDS Rleg_3740 NC_012850.1 3792157 3792651 R KEGG: ret:RHE_CH03670 hypothetical protein; hypothetical protein complement(3792157..3792651) Rhizobium leguminosarum bv. trifolii WSM1325 8014576 YP_002977523.1 CDS Rleg_3741 NC_012850.1 3792677 3793459 D KEGG: rec:RHECIAT_CH0003945 endonuclease III protein; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; endonuclease III 3792677..3793459 Rhizobium leguminosarum bv. trifolii WSM1325 8014577 YP_002977524.1 CDS Rleg_3742 NC_012850.1 3793424 3794002 R PFAM: regulatory protein TetR; KEGG: ret:RHE_CH03672 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3793424..3794002) Rhizobium leguminosarum bv. trifolii WSM1325 8014578 YP_002977525.1 CDS Rleg_3743 NC_012850.1 3794084 3794509 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH03673 glyoxalase/bleomycin resistance-like protein; glyoxalase/bleomycin resistance protein/dioxygenase 3794084..3794509 Rhizobium leguminosarum bv. trifolii WSM1325 8015843 YP_002977526.1 CDS Rleg_3744 NC_012850.1 3794513 3795226 R role in sulfur assimilation; CysZ-like protein complement(3794513..3795226) Rhizobium leguminosarum bv. trifolii WSM1325 8014579 YP_002977527.1 CDS Rleg_3745 NC_012850.1 3795461 3796315 D PFAM: helix-turn-helix protein RpiR; KEGG: rec:RHECIAT_CH0003949 transcriptional regulator protein; RpiR family transcriptional regulator 3795461..3796315 Rhizobium leguminosarum bv. trifolii WSM1325 8014580 YP_002977528.1 CDS Rleg_3746 NC_012850.1 3796367 3797950 R TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: rec:RHECIAT_CH0003950 ribulokinase protein; FGGY-family pentulose kinase complement(3796367..3797950) Rhizobium leguminosarum bv. trifolii WSM1325 8015844 YP_002977529.1 CDS Rleg_3747 NC_012850.1 3797950 3798639 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0003951 probable hydrolase phosphatase protein; HAD-superfamily hydrolase complement(3797950..3798639) Rhizobium leguminosarum bv. trifolii WSM1325 8014581 YP_002977530.1 CDS Rleg_3748 NC_012850.1 3798736 3800217 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: rec:RHECIAT_CH0003952 mannitol 2-dehydrogenase protein; mannitol dehydrogenase domain-containing protein complement(3798736..3800217) Rhizobium leguminosarum bv. trifolii WSM1325 8014582 YP_002977531.1 CDS Rleg_3749 NC_012850.1 3800303 3801301 R PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_CH03679 sorbitol/mannitol ABC transporter, ATP-binding protein; ABC transporter complement(3800303..3801301) Rhizobium leguminosarum bv. trifolii WSM1325 8015845 YP_002977532.1 CDS Rleg_3750 NC_012850.1 3801320 3802150 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH03680 sorbitol/mannitol ABC transporter, permease protein; ABC transporter permease complement(3801320..3802150) Rhizobium leguminosarum bv. trifolii WSM1325 8014583 YP_002977533.1 CDS Rleg_3751 NC_012850.1 3802152 3803033 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003955 sorbitol/mannitol ABC transporter, permease protein; ABC transporter permease complement(3802152..3803033) Rhizobium leguminosarum bv. trifolii WSM1325 8014584 YP_002977534.1 CDS Rleg_3752 NC_012850.1 3803164 3804474 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0003956 sorbitol/mannitol ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(3803164..3804474) Rhizobium leguminosarum bv. trifolii WSM1325 8014585 YP_002977535.1 CDS Rleg_3753 NC_012850.1 3804621 3805574 R PFAM: sugar-binding domain protein; KEGG: rec:RHECIAT_CH0003957 sorbitol/mannitol operon transcriptional regulator protein; DeoR family transcriptional regulator complement(3804621..3805574) Rhizobium leguminosarum bv. trifolii WSM1325 8014586 YP_002977536.1 CDS Rleg_3754 NC_012850.1 3805722 3806291 R PFAM: Exopolysaccharide synthesis ExoD; KEGG: ret:RHE_CH03684 exopolysaccharide biosynthesis protein; Exopolysaccharide synthesis ExoD complement(3805722..3806291) Rhizobium leguminosarum bv. trifolii WSM1325 8015846 YP_002977537.1 CDS Rleg_3755 NC_012850.1 3806705 3807619 D PFAM: ROK family protein; KEGG: rec:RHECIAT_CH0003959 transcriptional regulator protein, ROK family; ROK family protein 3806705..3807619 Rhizobium leguminosarum bv. trifolii WSM1325 8014587 YP_002977538.1 CDS Rleg_3756 NC_012850.1 3807616 3809526 R PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: ret:RHE_CH03686 beta-N-acetylhexosaminidase protein; beta-N-acetylhexosaminidase complement(3807616..3809526) Rhizobium leguminosarum bv. trifolii WSM1325 8014588 YP_002977539.1 CDS Rleg_3757 NC_012850.1 3809675 3812818 R PFAM: acriflavin resistance protein; KEGG: rec:RHECIAT_CH0003961 multidrug efflux transporter protein; acriflavin resistance protein complement(3809675..3812818) Rhizobium leguminosarum bv. trifolii WSM1325 8015847 YP_002977540.1 CDS Rleg_3758 NC_012850.1 3812846 3813985 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0003962 multidrug efflux transporter protein; RND family efflux transporter MFP subunit complement(3812846..3813985) Rhizobium leguminosarum bv. trifolii WSM1325 8014589 YP_002977541.1 CDS Rleg_3759 NC_012850.1 3814034 3814642 R PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0003963 transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(3814034..3814642) Rhizobium leguminosarum bv. trifolii WSM1325 8014590 YP_002977542.1 CDS Rleg_3760 NC_012850.1 3814901 3815332 R PFAM: OsmC family protein; KEGG: rec:RHECIAT_CH0003964 osmotically inducible protein; peroxiredoxin complement(3814901..3815332) Rhizobium leguminosarum bv. trifolii WSM1325 8015848 YP_002977543.1 CDS Rleg_3761 NC_012850.1 3815540 3816319 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH03691 short chain dehydrogenase; short chain dehydrogenase complement(3815540..3816319) Rhizobium leguminosarum bv. trifolii WSM1325 8014591 YP_002977544.1 CDS Rleg_3762 NC_012850.1 3816320 3817210 R PFAM: Aldose 1-epimerase; KEGG: rec:RHECIAT_CH0003966 aldose-1-epimerase protein; aldose 1-epimerase complement(3816320..3817210) Rhizobium leguminosarum bv. trifolii WSM1325 8014592 YP_002977545.1 CDS araH NC_012850.1 3817207 3818157 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(3817207..3818157) Rhizobium leguminosarum bv. trifolii WSM1325 8014593 YP_002977546.1 CDS araG NC_012850.1 3818175 3819680 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(3818175..3819680) Rhizobium leguminosarum bv. trifolii WSM1325 8014594 YP_002977547.1 CDS Rleg_3765 NC_012850.1 3819751 3820734 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rec:RHECIAT_CH0003969 probable sugar ABC transporter, substrate-binding protein; LacI family transcriptional regulator complement(3819751..3820734) Rhizobium leguminosarum bv. trifolii WSM1325 8014595 YP_002977548.1 CDS Rleg_3766 NC_012850.1 3820948 3821703 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_CH03696 GntR family transcriptional regulator; GntR family transcriptional regulator 3820948..3821703 Rhizobium leguminosarum bv. trifolii WSM1325 8014596 YP_002977549.1 CDS Rleg_3767 NC_012850.1 3821770 3822918 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_CH03697 galactonate dehydratase protein; galactonate dehydratase 3821770..3822918 Rhizobium leguminosarum bv. trifolii WSM1325 8014597 YP_002977550.1 CDS Rleg_3768 NC_012850.1 3823072 3823473 D PFAM: DoxX family protein; KEGG: ret:RHE_CH03698 hypothetical protein; DoxX family protein 3823072..3823473 Rhizobium leguminosarum bv. trifolii WSM1325 8014598 YP_002977551.1 CDS fabG NC_012850.1 3823562 3824341 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 3823562..3824341 Rhizobium leguminosarum bv. trifolii WSM1325 8014599 YP_002977552.1 CDS Rleg_3770 NC_012850.1 3824359 3825576 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH03700 adenylate cyclase protein; adenylate/guanylate cyclase complement(3824359..3825576) Rhizobium leguminosarum bv. trifolii WSM1325 8014600 YP_002977553.1 CDS Rleg_3771 NC_012850.1 3825643 3826668 R SMART: regulatory protein LacI; KEGG: rec:RHECIAT_CH0003975 transcriptional regulator protein; LacI family transcriptional regulator complement(3825643..3826668) Rhizobium leguminosarum bv. trifolii WSM1325 8014601 YP_002977554.1 CDS Rleg_3772 NC_012850.1 3826764 3827951 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: ret:RHE_CH03702 hypothetical protein; Phytanoyl-CoA dioxygenase 3826764..3827951 Rhizobium leguminosarum bv. trifolii WSM1325 8014602 YP_002977555.1 CDS Rleg_3773 NC_012850.1 3828044 3828865 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0003977 oxidoreductase protein; short chain dehydrogenase 3828044..3828865 Rhizobium leguminosarum bv. trifolii WSM1325 8014603 YP_002977556.1 CDS Rleg_3774 NC_012850.1 3829231 3830142 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: ret:RHE_CH03704 gluconolactonase protein; gluconolactonase 3829231..3830142 Rhizobium leguminosarum bv. trifolii WSM1325 8014604 YP_002977557.1 CDS Rleg_3775 NC_012850.1 3830144 3830893 R PFAM: protein of unknown function DUF1037; KEGG: mmw:Mmwyl1_0027 hypothetical protein; hypothetical protein complement(3830144..3830893) Rhizobium leguminosarum bv. trifolii WSM1325 8014605 YP_002977558.1 CDS Rleg_3776 NC_012850.1 3830912 3831994 R PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sugar ABC transporter; ABC transporter complement(3830912..3831994) Rhizobium leguminosarum bv. trifolii WSM1325 8014606 YP_002977559.1 CDS Rleg_3777 NC_012850.1 3832014 3832925 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_0352 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(3832014..3832925) Rhizobium leguminosarum bv. trifolii WSM1325 8015849 YP_002977560.1 CDS Rleg_3778 NC_012850.1 3832927 3833814 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_0362 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(3832927..3833814) Rhizobium leguminosarum bv. trifolii WSM1325 8014607 YP_002977561.1 CDS Rleg_3779 NC_012850.1 3833921 3835213 R PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_3812 extracellular solute-binding protein family 1; extracellular solute-binding protein complement(3833921..3835213) Rhizobium leguminosarum bv. trifolii WSM1325 8014608 YP_002977562.1 CDS Rleg_3780 NC_012850.1 3835415 3836422 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:bll6385 oxidoreductase; oxidoreductase domain-containing protein 3835415..3836422 Rhizobium leguminosarum bv. trifolii WSM1325 8015850 YP_002977563.1 CDS Rleg_3781 NC_012850.1 3836432 3837430 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: mes:Meso_1929 transcriptional regulator, LacI family; LacI family transcriptional regulator 3836432..3837430 Rhizobium leguminosarum bv. trifolii WSM1325 8014609 YP_002977564.1 CDS Rleg_3782 NC_012850.1 3837634 3839877 D PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: rec:RHECIAT_CH0003979 beta-D-galactosidase protein; family 2 glycoside hydrolase 3837634..3839877 Rhizobium leguminosarum bv. trifolii WSM1325 8014610 YP_002977565.1 CDS Rleg_3783 NC_012850.1 3839988 3841103 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003980 probable sugar ABC transporter, ATP-binding protein; ABC transporter complement(3839988..3841103) Rhizobium leguminosarum bv. trifolii WSM1325 8015851 YP_002977566.1 CDS Rleg_3784 NC_012850.1 3841107 3842051 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH03707 sugar ABC transporter, permease protein; ABC transporter permease complement(3841107..3842051) Rhizobium leguminosarum bv. trifolii WSM1325 8014611 YP_002977567.1 CDS Rleg_3785 NC_012850.1 3842048 3843001 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0003982 probable sugar ABC transporter, permease protein; SNP /replace=G; ABC transporter permease complement(3842048..3843001) Rhizobium leguminosarum bv. trifolii WSM1325 8015852 YP_002977568.1 CDS Rleg_3786 NC_012850.1 3843144 3844403 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0003983 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(3843144..3844403) Rhizobium leguminosarum bv. trifolii WSM1325 8014612 YP_002977569.1 CDS Rleg_3787 NC_012850.1 3844711 3845763 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_CH03710 LacI family transcriptional regulator; LacI family transcriptional regulator 3844711..3845763 Rhizobium leguminosarum bv. trifolii WSM1325 8014613 YP_002977570.1 CDS Rleg_3788 NC_012850.1 3845938 3846648 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: rec:RHECIAT_CH0003984 succinoglycan biosynthesis transcriptional regulator protein; exsB protein 3845938..3846648 Rhizobium leguminosarum bv. trifolii WSM1325 8015853 YP_002977571.1 CDS Rleg_3789 NC_012850.1 3846648 3847004 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: ret:RHE_CH03712 6-pyruvoyl tetrahydropterin synthase protein; 6-pyruvoyl-tetrahydropterin synthase 3846648..3847004 Rhizobium leguminosarum bv. trifolii WSM1325 8014614 YP_002977572.1 CDS Rleg_3790 NC_012850.1 3847001 3847729 D TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: Radical SAM domain protein; KEGG: rec:RHECIAT_CH0003986 organic-radical-activating protein; 7-cyano-7-deazaguanosine biosynthesis protein QueE 3847001..3847729 Rhizobium leguminosarum bv. trifolii WSM1325 8014615 YP_002977573.1 CDS Rleg_3791 NC_012850.1 3847748 3848980 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rec:RHECIAT_CH0003987 adenylate cyclase protein; adenylate/guanylate cyclase complement(3847748..3848980) Rhizobium leguminosarum bv. trifolii WSM1325 8014616 YP_002977574.1 CDS nrdF NC_012850.1 3849085 3850059 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(3849085..3850059) Rhizobium leguminosarum bv. trifolii WSM1325 8014617 YP_002977575.1 CDS Rleg_3793 NC_012850.1 3850295 3852445 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3850295..3852445) Rhizobium leguminosarum bv. trifolii WSM1325 8014618 YP_002977576.1 CDS nrdI NC_012850.1 3852415 3852828 R in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein complement(3852415..3852828) Rhizobium leguminosarum bv. trifolii WSM1325 8014619 YP_002977577.1 CDS Rleg_3795 NC_012850.1 3852838 3853059 R TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; KEGG: rec:RHECIAT_CH0003991 glutaredoxin protein; glutaredoxin-like protein NrdH complement(3852838..3853059) Rhizobium leguminosarum bv. trifolii WSM1325 8014620 YP_002977578.1 CDS Rleg_3796 NC_012850.1 3853731 3856001 R TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH03719 heavy metal-transporting ATPase protein; heavy metal translocating P-type ATPase complement(3853731..3856001) Rhizobium leguminosarum bv. trifolii WSM1325 8014621 YP_002977579.1 CDS Rleg_3797 NC_012850.1 3856070 3856492 D PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ret:RHE_CH03720 MerR family transcriptional regulator; MerR family transcriptional regulator 3856070..3856492 Rhizobium leguminosarum bv. trifolii WSM1325 8014622 YP_002977580.1 CDS Rleg_3798 NC_012850.1 3856562 3857770 D PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: ret:RHE_CH03721 dehydrogenase protein; hypothetical protein 3856562..3857770 Rhizobium leguminosarum bv. trifolii WSM1325 8014623 YP_002977581.1 CDS Rleg_3799 NC_012850.1 3857811 3858296 R KEGG: rec:RHECIAT_CH0003995 peptide-methionine (R)-S-oxide reductase protein; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(3857811..3858296) Rhizobium leguminosarum bv. trifolii WSM1325 8014624 YP_002977582.1 CDS Rleg_3800 NC_012850.1 3858505 3859464 D PFAM: GAF domain protein; helix-turn-helix Fis-type; KEGG: rec:RHECIAT_CH0003996 probable transcriptional regulator protein; Fis family transcriptional regulator 3858505..3859464 Rhizobium leguminosarum bv. trifolii WSM1325 8014625 YP_002977583.1 CDS Rleg_3801 NC_012850.1 3859630 3861138 D PFAM: aldehyde Dehydrogenase; KEGG: rec:RHECIAT_CH0003997 aldehyde dehydrogenase (NAD(+)) protein; aldehyde dehydrogenase 3859630..3861138 Rhizobium leguminosarum bv. trifolii WSM1325 8014626 YP_002977584.1 CDS Rleg_3802 NC_012850.1 3861356 3861748 D PFAM: protein of unknown function DUF779; KEGG: rec:RHECIAT_CH0003998 hypothetical protein; hypothetical protein 3861356..3861748 Rhizobium leguminosarum bv. trifolii WSM1325 8014627 YP_002977585.1 CDS Rleg_3803 NC_012850.1 3861854 3862450 D TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rec:RHECIAT_CH0003999 intracellular protease protein, PfpI family; Pfpi family intracellular protease 3861854..3862450 Rhizobium leguminosarum bv. trifolii WSM1325 8015854 YP_002977586.1 CDS Rleg_3804 NC_012850.1 3862476 3862826 D KEGG: ret:RHE_CH03726 hypothetical protein; hypothetical protein 3862476..3862826 Rhizobium leguminosarum bv. trifolii WSM1325 8014628 YP_002977587.1 CDS Rleg_3805 NC_012850.1 3862982 3863689 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH03727 3-oxoacyl-[acyl-carrier protein] reductase protein; short-chain dehydrogenase/reductase SDR 3862982..3863689 Rhizobium leguminosarum bv. trifolii WSM1325 8014629 YP_002977588.1 CDS Rleg_3806 NC_012850.1 3863926 3865059 D PFAM: sodium/calcium exchanger membrane region; KEGG: rec:RHECIAT_CH0004002 Ca2+/H+ antiporter protein; sodium/calcium exchanger membrane region 3863926..3865059 Rhizobium leguminosarum bv. trifolii WSM1325 8014630 YP_002977589.1 CDS Rleg_3807 NC_012850.1 3865198 3865962 D KEGG: rec:RHECIAT_CH0004003 hypothetical protein; hypothetical protein 3865198..3865962 Rhizobium leguminosarum bv. trifolii WSM1325 8014631 YP_002977590.1 CDS Rleg_3808 NC_012850.1 3866505 3867701 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0004005 multidrug efflux protein; RND family efflux transporter MFP subunit 3866505..3867701 Rhizobium leguminosarum bv. trifolii WSM1325 8014632 YP_002977591.1 CDS Rleg_3809 NC_012850.1 3867743 3870913 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rec:RHECIAT_CH0004006 multidrug efflux protein, Acr/RND family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3867743..3870913 Rhizobium leguminosarum bv. trifolii WSM1325 8014633 YP_002977592.1 CDS Rleg_3810 NC_012850.1 3871011 3871829 R KEGG: rec:RHECIAT_CH0004009 hypothetical protein; hypothetical protein complement(3871011..3871829) Rhizobium leguminosarum bv. trifolii WSM1325 8014634 YP_002977593.1 CDS Rleg_3811 NC_012850.1 3872097 3874619 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rec:RHECIAT_PC0000747 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3872097..3874619) Rhizobium leguminosarum bv. trifolii WSM1325 8014635 YP_002977594.1 CDS Rleg_3812 NC_012850.1 3882038 3883960 D PFAM: peptidase M23; KEGG: rec:RHECIAT_CH0004020 peptidase protein, M23/M37 family; peptidase M23 3882038..3883960 Rhizobium leguminosarum bv. trifolii WSM1325 8014641 YP_002977595.1 CDS Rleg_3813 NC_012850.1 3884060 3886660 R KEGG: rec:RHECIAT_CH0004021 chaperone heat-shock protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB complement(3884060..3886660) Rhizobium leguminosarum bv. trifolii WSM1325 8014642 YP_002977596.1 CDS Rleg_3814 NC_012850.1 3886912 3887670 R KEGG: rec:RHECIAT_CH0004022 hypothetical protein; hypothetical protein complement(3886912..3887670) Rhizobium leguminosarum bv. trifolii WSM1325 8015856 YP_002977597.1 CDS Rleg_3815 NC_012850.1 3888013 3888873 R KEGG: ret:RHE_CH03755 protoporphyrinogen oxidase (methyltransferase) protein; TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; methyltransferase type 12; HemK family modification methylase complement(3888013..3888873) Rhizobium leguminosarum bv. trifolii WSM1325 8014643 YP_002977598.1 CDS prfA NC_012850.1 3888870 3889949 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(3888870..3889949) Rhizobium leguminosarum bv. trifolii WSM1325 8014644 YP_002977599.1 CDS Rleg_3817 NC_012850.1 3889979 3892246 R KEGG: rec:RHECIAT_CH0004025 phosphoenolpyruvate--protein phosphotransferase protein (enzyme I of the phosphotransferase system); TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; GAF domain protein; SMART: GAF domain protein; protein PtsP complement(3889979..3892246) Rhizobium leguminosarum bv. trifolii WSM1325 8014645 YP_002977600.1 CDS Rleg_3818 NC_012850.1 3892336 3893595 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(3892336..3893595) Rhizobium leguminosarum bv. trifolii WSM1325 8014646 YP_002977601.1 CDS Rleg_3819 NC_012850.1 3893908 3894654 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3893908..3894654 Rhizobium leguminosarum bv. trifolii WSM1325 8014647 YP_002977602.1 CDS Rleg_3820 NC_012850.1 3894731 3895159 R PFAM: protein of unknown function DUF1178; KEGG: rec:RHECIAT_CH0004028 hypothetical protein; hypothetical protein complement(3894731..3895159) Rhizobium leguminosarum bv. trifolii WSM1325 8014648 YP_002977603.1 CDS Rleg_3821 NC_012850.1 3895156 3896013 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ret:RHE_CH03761 amidohydrolase protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3895156..3896013) Rhizobium leguminosarum bv. trifolii WSM1325 8014649 YP_002977604.1 CDS Rleg_3822 NC_012850.1 3896024 3896281 R TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: rec:RHECIAT_CH0004030 glutaredoxin protein; glutaredoxin 3 complement(3896024..3896281) Rhizobium leguminosarum bv. trifolii WSM1325 8014650 YP_002977605.1 CDS Rleg_3823 NC_012850.1 3896313 3897089 R KEGG: rec:RHECIAT_CH0004031 competence protein F (phosphoribosyltransferase protein); competence protein F complement(3896313..3897089) Rhizobium leguminosarum bv. trifolii WSM1325 8014651 YP_002977606.1 CDS Rleg_3824 NC_012850.1 3897167 3898051 D KEGG: rec:RHECIAT_CH0004032 methyltransferase protein; methyltransferase protein 3897167..3898051 Rhizobium leguminosarum bv. trifolii WSM1325 8014652 YP_002977607.1 CDS Rleg_3825 NC_012850.1 3898067 3898234 R PFAM: Flp/Fap pilin component; KEGG: rec:RHECIAT_CH0004033 pilus component protein; Flp/Fap pilin component complement(3898067..3898234) Rhizobium leguminosarum bv. trifolii WSM1325 8014653 YP_002977608.1 CDS Rleg_3826 NC_012850.1 3898307 3898624 R KEGG: ret:RHE_CH03765 hypothetical protein; hypothetical protein complement(3898307..3898624) Rhizobium leguminosarum bv. trifolii WSM1325 8014654 YP_002977609.1 CDS Rleg_3827 NC_012850.1 3898751 3899164 R TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH03766 NTP pyrophosphohydrolase protein; mutator MutT protein complement(3898751..3899164) Rhizobium leguminosarum bv. trifolii WSM1325 8014655 YP_002977610.1 CDS Rleg_3828 NC_012850.1 3899161 3899967 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0004036 acetyltransferase protein; N-acetyltransferase GCN5 complement(3899161..3899967) Rhizobium leguminosarum bv. trifolii WSM1325 8014656 YP_002977611.1 CDS argJ NC_012850.1 3899948 3901189 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(3899948..3901189) Rhizobium leguminosarum bv. trifolii WSM1325 8015857 YP_002977612.1 CDS Rleg_3830 NC_012850.1 3901422 3902303 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rec:RHECIAT_CH0004038 peptidyl-prolyl cis-trans isomerase D signal peptide protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(3901422..3902303) Rhizobium leguminosarum bv. trifolii WSM1325 8014657 YP_002977613.1 CDS Rleg_3831 NC_012850.1 3902550 3905267 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 3902550..3905267 Rhizobium leguminosarum bv. trifolii WSM1325 8014658 YP_002977614.1 CDS Rleg_3832 NC_012850.1 3905448 3906863 D PFAM: polysaccharide biosynthesis protein; KEGG: rec:RHECIAT_CH0004040 polysaccharide export related protein; polysaccharide biosynthesis protein 3905448..3906863 Rhizobium leguminosarum bv. trifolii WSM1325 8014659 YP_002977615.1 CDS Rleg_3833 NC_012850.1 3906864 3908141 D KEGG: ret:RHE_CH03772 hypothetical protein; hypothetical protein 3906864..3908141 Rhizobium leguminosarum bv. trifolii WSM1325 8014660 YP_002977616.1 CDS Rleg_3834 NC_012850.1 3908168 3909799 R PFAM: AMP-dependent synthetase and ligase; KEGG: rec:RHECIAT_CH0004042 acetyl-CoA synthetase protein; AMP-dependent synthetase and ligase complement(3908168..3909799) Rhizobium leguminosarum bv. trifolii WSM1325 8014661 YP_002977617.1 CDS Rleg_3835 NC_012850.1 3910023 3911003 D PFAM: aldo/keto reductase; KEGG: ret:RHE_CH03774 oxidoreductase (aldo/keto reductase) protein; aldo/keto reductase 3910023..3911003 Rhizobium leguminosarum bv. trifolii WSM1325 8014662 YP_002977618.1 CDS Rleg_3836 NC_012850.1 3911094 3911672 R PFAM: regulatory protein TetR; KEGG: ret:RHE_CH03775 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3911094..3911672) Rhizobium leguminosarum bv. trifolii WSM1325 8015858 YP_002977619.1 CDS Rleg_3837 NC_012850.1 3911802 3913097 D PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0004046 probable monocarboxylate transporter, permease protein; major facilitator superfamily protein 3911802..3913097 Rhizobium leguminosarum bv. trifolii WSM1325 8014663 YP_002977620.1 CDS Rleg_3838 NC_012850.1 3913412 3913870 R KEGG: rec:RHECIAT_PC0000828 hypothetical protein; hypothetical protein complement(3913412..3913870) Rhizobium leguminosarum bv. trifolii WSM1325 8014665 YP_002977621.1 CDS Rleg_3839 NC_012850.1 3913985 3914842 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_0304 transcriptional regulator, LysR family; LysR family transcriptional regulator 3913985..3914842 Rhizobium leguminosarum bv. trifolii WSM1325 8015859 YP_002977622.1 CDS Rleg_3840 NC_012850.1 3915076 3915363 R KEGG: rec:RHECIAT_CH0004048 hypothetical protein; hypothetical protein complement(3915076..3915363) Rhizobium leguminosarum bv. trifolii WSM1325 8014666 YP_002977623.1 CDS Rleg_3841 NC_012850.1 3915533 3915817 R KEGG: rec:RHECIAT_CH0004049 hypothetical protein; hypothetical protein complement(3915533..3915817) Rhizobium leguminosarum bv. trifolii WSM1325 8014667 YP_002977624.1 CDS Rleg_3842 NC_012850.1 3916030 3917778 D PFAM: sodium/hydrogen exchanger; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: rec:RHECIAT_CH0004050 probable cation transporter protein; cyclic nucleotide-binding protein 3916030..3917778 Rhizobium leguminosarum bv. trifolii WSM1325 8015860 YP_002977625.1 CDS Rleg_3843 NC_012850.1 3917826 3918110 R KEGG: rec:RHECIAT_CH0004051 hypothetical protein; hypothetical protein complement(3917826..3918110) Rhizobium leguminosarum bv. trifolii WSM1325 8014668 YP_002977626.1 CDS Rleg_3844 NC_012850.1 3918314 3918904 D KEGG: ret:RHE_CH03782 transmembrane-associated alkaline phosphatase protein; transmembrane-associated alkaline phosphatase protein 3918314..3918904 Rhizobium leguminosarum bv. trifolii WSM1325 8014669 YP_002977627.1 CDS Rleg_3845 NC_012850.1 3918983 3919498 D KEGG: rec:RHECIAT_CH0004053 hypothetical protein; hypothetical protein 3918983..3919498 Rhizobium leguminosarum bv. trifolii WSM1325 8014670 YP_002977628.1 CDS Rleg_3846 NC_012850.1 3919574 3920131 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rec:RHECIAT_CH0004054 endonuclease protein; HNH endonuclease complement(3919574..3920131) Rhizobium leguminosarum bv. trifolii WSM1325 8014671 YP_002977629.1 CDS Rleg_3847 NC_012850.1 3920243 3920887 R PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: rec:RHECIAT_CH0004055 DNA-3-methyladenine glycosidase II protein; HhH-GPD family protein complement(3920243..3920887) Rhizobium leguminosarum bv. trifolii WSM1325 8014672 YP_002977630.1 CDS Rleg_3848 NC_012850.1 3920934 3921815 D this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 3920934..3921815 Rhizobium leguminosarum bv. trifolii WSM1325 8014673 YP_002977631.1 CDS Rleg_3849 NC_012850.1 3921780 3922703 R TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: rec:RHECIAT_CH0004057 ribonuclease protein; ribonuclease BN complement(3921780..3922703) Rhizobium leguminosarum bv. trifolii WSM1325 8014674 YP_002977632.1 CDS Rleg_3850 NC_012850.1 3922780 3923613 D PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH03788 short chain dehydrogenase; short chain dehydrogenase 3922780..3923613 Rhizobium leguminosarum bv. trifolii WSM1325 8014675 YP_002977633.1 CDS Rleg_3851 NC_012850.1 3923632 3923835 D KEGG: rec:RHECIAT_CH0004059 hypothetical protein; hypothetical protein 3923632..3923835 Rhizobium leguminosarum bv. trifolii WSM1325 8014676 YP_002977634.1 CDS Rleg_3852 NC_012850.1 3923857 3924435 D TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: ret:RHE_CH03790 hypothetical protein; ATP/cobalamin adenosyltransferase 3923857..3924435 Rhizobium leguminosarum bv. trifolii WSM1325 8014677 YP_002977635.1 CDS Rleg_3853 NC_012850.1 3924469 3925254 D PFAM: Rhomboid family protein; KEGG: ret:RHE_CH03791 hypothetical protein; rhomboid family protein 3924469..3925254 Rhizobium leguminosarum bv. trifolii WSM1325 8014678 YP_002977636.1 CDS Rleg_3854 NC_012850.1 3925442 3926191 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ret:RHE_PF00405 electron transport flavoprotein, beta subunit; electron transfer flavoprotein subunit alpha/beta 3925442..3926191 Rhizobium leguminosarum bv. trifolii WSM1325 8014679 YP_002977637.1 CDS Rleg_3855 NC_012850.1 3926217 3927158 D PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: electron transfer flavoprotein alpha-subunit alpha-etf flavoprotein ; K03522 electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha 3926217..3927158 Rhizobium leguminosarum bv. trifolii WSM1325 8014680 YP_002977638.1 CDS Rleg_3856 NC_012850.1 3927307 3928188 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 3927307..3928188 Rhizobium leguminosarum bv. trifolii WSM1325 8014681 YP_002977639.1 CDS Rleg_3857 NC_012850.1 3928238 3928900 R PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rec:RHECIAT_CH0004065 thiol:disulfide interchange protein; redoxin domain-containing protein complement(3928238..3928900) Rhizobium leguminosarum bv. trifolii WSM1325 8014682 YP_002977640.1 CDS Rleg_3858 NC_012850.1 3928941 3930344 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3928941..3930344 Rhizobium leguminosarum bv. trifolii WSM1325 8014683 YP_002977641.1 CDS Rleg_3859 NC_012850.1 3930524 3930715 D KEGG: rec:RHECIAT_CH0004067 hypothetical protein; hypothetical protein 3930524..3930715 Rhizobium leguminosarum bv. trifolii WSM1325 8015861 YP_002977642.1 CDS Rleg_3860 NC_012850.1 3930727 3931995 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rec:RHECIAT_CH0004068 diaminopimelate decarboxylase protein; diaminopimelate decarboxylase 3930727..3931995 Rhizobium leguminosarum bv. trifolii WSM1325 8014684 YP_002977643.1 CDS Rleg_3861 NC_012850.1 3932161 3934815 D KEGG: rec:RHECIAT_CH0004069 hypothetical protein; hypothetical protein 3932161..3934815 Rhizobium leguminosarum bv. trifolii WSM1325 8014685 YP_002977644.1 CDS Rleg_3862 NC_012850.1 3934959 3935318 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ret:RHE_CH03799 two-component response regulator protein; response regulator receiver protein complement(3934959..3935318) Rhizobium leguminosarum bv. trifolii WSM1325 8015862 YP_002977645.1 CDS Rleg_3863 NC_012850.1 3935487 3936029 R KEGG: rec:RHECIAT_CH0004071 hypoxanthine phosphoribosyltransferase protein; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(3935487..3936029) Rhizobium leguminosarum bv. trifolii WSM1325 8014686 YP_002977646.1 CDS Rleg_3864 NC_012850.1 3936159 3936818 R KEGG: ret:RHE_CH03801 hypothetical protein; hypothetical protein complement(3936159..3936818) Rhizobium leguminosarum bv. trifolii WSM1325 8014687 YP_002977647.1 CDS Rleg_3865 NC_012850.1 3937025 3937684 D KEGG: rec:RHECIAT_CH0004073 cell division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: AAA ATPase; cell division ATP-binding protein FtsE 3937025..3937684 Rhizobium leguminosarum bv. trifolii WSM1325 8014688 YP_002977648.1 CDS Rleg_3866 NC_012850.1 3937677 3938690 D KEGG: ret:RHE_CH03803 cell division protein; cell division protein 3937677..3938690 Rhizobium leguminosarum bv. trifolii WSM1325 8014689 YP_002977649.1 CDS Rleg_3867 NC_012850.1 3938758 3939474 D PFAM: protein of unknown function DUF218; KEGG: rec:RHECIAT_CH0004075 hypothetical protein; hypothetical protein 3938758..3939474 Rhizobium leguminosarum bv. trifolii WSM1325 8014690 YP_002977650.1 CDS Rleg_3868 NC_012850.1 3939775 3940572 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rec:RHECIAT_CH0004076 1-acylglycerol-3-phosphate O-acyltransferase protein; phospholipid/glycerol acyltransferase 3939775..3940572 Rhizobium leguminosarum bv. trifolii WSM1325 8014691 YP_002977651.1 CDS Rleg_3869 NC_012850.1 3940575 3941105 R PFAM: ChaC family protein; AIG2 family protein; KEGG: rec:RHECIAT_CH0004077 cation transporter protein; ChaC family protein complement(3940575..3941105) Rhizobium leguminosarum bv. trifolii WSM1325 8014692 YP_002977652.1 CDS Rleg_3870 NC_012850.1 3941157 3942173 D KEGG: ret:RHE_CH03807 hypothetical protein; hypothetical protein 3941157..3942173 Rhizobium leguminosarum bv. trifolii WSM1325 8014693 YP_002977653.1 CDS Rleg_3871 NC_012850.1 3942269 3942688 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH03808 acetyltransferase protein; N-acetyltransferase GCN5 complement(3942269..3942688) Rhizobium leguminosarum bv. trifolii WSM1325 8014694 YP_002977654.1 CDS Rleg_3872 NC_012850.1 3942697 3943620 R dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase complement(3942697..3943620) Rhizobium leguminosarum bv. trifolii WSM1325 8014695 YP_002977655.1 CDS Rleg_3873 NC_012850.1 3943617 3944726 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3943617..3944726) Rhizobium leguminosarum bv. trifolii WSM1325 8014696 YP_002977656.1 CDS Rleg_3874 NC_012850.1 3944846 3945586 R PFAM: methyltransferase type 11; KEGG: rec:RHECIAT_CH0004082 methyltransferase protein; type 11 methyltransferase complement(3944846..3945586) Rhizobium leguminosarum bv. trifolii WSM1325 8014697 YP_002977657.1 CDS Rleg_3875 NC_012850.1 3945676 3946446 D KEGG: ret:RHE_CH03812 hydroxyacylgluthatione hydrolase protein; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase; hydroxyacylglutathione hydrolase 3945676..3946446 Rhizobium leguminosarum bv. trifolii WSM1325 8014698 YP_002977658.1 CDS Rleg_3876 NC_012850.1 3946446 3946868 D PFAM: protein of unknown function DUF985; KEGG: rec:RHECIAT_CH0004084 hypothetical protein; hypothetical protein 3946446..3946868 Rhizobium leguminosarum bv. trifolii WSM1325 8014699 YP_002977659.1 CDS Rleg_3877 NC_012850.1 3946930 3947820 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH03814 hypothetical protein; hypothetical protein complement(3946930..3947820) Rhizobium leguminosarum bv. trifolii WSM1325 8014700 YP_002977660.1 CDS Rleg_3878 NC_012850.1 3947851 3948633 R KEGG: ret:RHE_CH03815 hypothetical protein; hypothetical protein complement(3947851..3948633) Rhizobium leguminosarum bv. trifolii WSM1325 8014701 YP_002977661.1 CDS rpmB NC_012850.1 3948876 3949172 D required for 70S ribosome assembly; 50S ribosomal protein L28 3948876..3949172 Rhizobium leguminosarum bv. trifolii WSM1325 8014702 YP_002977662.1 CDS Rleg_3880 NC_012850.1 3949289 3949924 D TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: ret:RHE_CH03817 hypothetical protein; hypothetical protein 3949289..3949924 Rhizobium leguminosarum bv. trifolii WSM1325 8015863 YP_002977663.1 CDS Rleg_3881 NC_012850.1 3949925 3950491 R KEGG: rec:RHECIAT_CH0004090 hypothetical protein; hypothetical protein complement(3949925..3950491) Rhizobium leguminosarum bv. trifolii WSM1325 8014703 YP_002977664.1 CDS Rleg_3882 NC_012850.1 3950568 3951605 R KEGG: ret:RHE_CH03819 hypothetical protein; hypothetical protein complement(3950568..3951605) Rhizobium leguminosarum bv. trifolii WSM1325 8014704 YP_002977665.1 CDS Rleg_3883 NC_012850.1 3951619 3953520 R KEGG: rec:RHECIAT_CH0004092 cobalamin biosynthesis protein; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase large subunit complement(3951619..3953520) Rhizobium leguminosarum bv. trifolii WSM1325 8015864 YP_002977666.1 CDS Rleg_3884 NC_012850.1 3953533 3954525 R KEGG: ret:RHE_CH03821 cobalamin biosynthesis protein; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; cobalt chelatase small subunit complement(3953533..3954525) Rhizobium leguminosarum bv. trifolii WSM1325 8014705 YP_002977667.1 CDS Rleg_3885 NC_012850.1 3954837 3955454 R PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: rec:RHECIAT_CH0004094 molecular chaperone protein DnaJ; heat shock protein DnaJ domain-containing protein complement(3954837..3955454) Rhizobium leguminosarum bv. trifolii WSM1325 8014706 YP_002977668.1 CDS Rleg_3886 NC_012850.1 3955556 3955840 D PFAM: BolA family protein; KEGG: bolA; stress induced morphogen ; K05527 BolA protein; BolA family protein 3955556..3955840 Rhizobium leguminosarum bv. trifolii WSM1325 8015865 YP_002977669.1 CDS Rleg_3887 NC_012850.1 3955888 3957198 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: rec:RHECIAT_CH0004095 hemolysin protein; hypothetical protein complement(3955888..3957198) Rhizobium leguminosarum bv. trifolii WSM1325 8014707 YP_002977670.1 CDS aroB NC_012850.1 3957198 3958328 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(3957198..3958328) Rhizobium leguminosarum bv. trifolii WSM1325 8014708 YP_002977671.1 CDS Rleg_3889 NC_012850.1 3958325 3958915 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(3958325..3958915) Rhizobium leguminosarum bv. trifolii WSM1325 8014709 YP_002977672.1 CDS Rleg_3890 NC_012850.1 3959064 3959240 D KEGG: hypothetical signal peptide protein; hypothetical protein 3959064..3959240 Rhizobium leguminosarum bv. trifolii WSM1325 8014710 YP_002977673.1 CDS xerD NC_012850.1 3959246 3960199 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 3959246..3960199 Rhizobium leguminosarum bv. trifolii WSM1325 8014711 YP_002977674.1 CDS Rleg_3892 NC_012850.1 3960262 3961215 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 3960262..3961215 Rhizobium leguminosarum bv. trifolii WSM1325 8014712 YP_002977675.1 CDS Rleg_3893 NC_012850.1 3961413 3962639 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0004100 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3961413..3962639 Rhizobium leguminosarum bv. trifolii WSM1325 8014713 YP_002977676.1 CDS Rleg_3894 NC_012850.1 3962645 3962869 D PFAM: SirA family protein; KEGG: rec:RHECIAT_CH0004101 hypothetical protein; SirA family protein 3962645..3962869 Rhizobium leguminosarum bv. trifolii WSM1325 8014714 YP_002977677.1 CDS Rleg_3895 NC_012850.1 3962866 3964041 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rec:RHECIAT_CH0004102 probable cobalamin synthesis protein; cobalamin synthesis protein P47K complement(3962866..3964041) Rhizobium leguminosarum bv. trifolii WSM1325 8014715 YP_002977678.1 CDS Rleg_3896 NC_012850.1 3964060 3965193 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rec:RHECIAT_CH0004103 D-alanyl-D-alanine carboxypeptidase protein; serine-type D-Ala-D-Ala carboxypeptidase complement(3964060..3965193) Rhizobium leguminosarum bv. trifolii WSM1325 8014716 YP_002977679.1 CDS Rleg_3897 NC_012850.1 3965351 3966514 D KEGG: rec:RHECIAT_CH0004104 probable amidohydrolase protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3965351..3966514 Rhizobium leguminosarum bv. trifolii WSM1325 8014717 YP_002977680.1 CDS Rleg_3898 NC_012850.1 3966982 3968058 R PFAM: acyltransferase; KEGG: ret:RHE_CH00333 acetyltransferase protein; acyltransferase complement(3966982..3968058) Rhizobium leguminosarum bv. trifolii WSM1325 8014719 YP_002977681.1 CDS Rleg_3900 NC_012850.1 3968331 3968864 R KEGG: rec:RHECIAT_CH0004116 hypothetical protein; hypothetical protein complement(3968331..3968864) Rhizobium leguminosarum bv. trifolii WSM1325 8014721 YP_002977682.1 CDS Rleg_3901 NC_012850.1 3969011 3969253 D KEGG: rec:RHECIAT_CH0004117 hypothetical protein; hypothetical protein 3969011..3969253 Rhizobium leguminosarum bv. trifolii WSM1325 8014722 YP_002977683.1 CDS Rleg_3902 NC_012850.1 3969371 3969523 D hypothetical protein 3969371..3969523 Rhizobium leguminosarum bv. trifolii WSM1325 8014723 YP_002977684.1 CDS Rleg_3903 NC_012850.1 3969607 3969897 R PFAM: transport-associated; KEGG: rec:RHECIAT_CH0004118 hypothetical protein; transport-associated complement(3969607..3969897) Rhizobium leguminosarum bv. trifolii WSM1325 8015866 YP_002977685.1 CDS Rleg_3904 NC_012850.1 3969959 3970720 R KEGG: rec:RHECIAT_CH0004119 hypothetical protein; hypothetical protein complement(3969959..3970720) Rhizobium leguminosarum bv. trifolii WSM1325 8014724 YP_002977686.1 CDS Rleg_3905 NC_012850.1 3970993 3972183 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3970993..3972183 Rhizobium leguminosarum bv. trifolii WSM1325 8014725 YP_002977687.1 CDS Rleg_3906 NC_012850.1 3972244 3973329 R PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_CH03840 sugar ABC transporter, ATP-binding protein; ABC transporter complement(3972244..3973329) Rhizobium leguminosarum bv. trifolii WSM1325 8015867 YP_002977688.1 CDS Rleg_3907 NC_012850.1 3973342 3975288 R PFAM: protein of unknown function DUF1680; KEGG: rec:RHECIAT_CH0004122 hypothetical protein; hypothetical protein complement(3973342..3975288) Rhizobium leguminosarum bv. trifolii WSM1325 8014726 YP_002977689.1 CDS Rleg_3908 NC_012850.1 3975285 3976148 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH03842 sugar ABC transporter, permease protein; ABC transporter permease complement(3975285..3976148) Rhizobium leguminosarum bv. trifolii WSM1325 8014727 YP_002977690.1 CDS Rleg_3909 NC_012850.1 3976145 3977062 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0004124 sugar ABC transporter, permease protein; ABC transporter permease complement(3976145..3977062) Rhizobium leguminosarum bv. trifolii WSM1325 8014728 YP_002977691.1 CDS Rleg_3910 NC_012850.1 3977137 3978375 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH03844 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(3977137..3978375) Rhizobium leguminosarum bv. trifolii WSM1325 8015868 YP_002977692.1 CDS Rleg_3911 NC_012850.1 3978430 3979407 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_CH03845 LacI family transcriptional regulator; LacI family transcriptional regulator complement(3978430..3979407) Rhizobium leguminosarum bv. trifolii WSM1325 8014729 YP_002977693.1 CDS Rleg_3912 NC_012850.1 3979768 3980982 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(3979768..3980982) Rhizobium leguminosarum bv. trifolii WSM1325 8014730 YP_002977694.1 CDS Rleg_3913 NC_012850.1 3981307 3981564 D PFAM: 17 kDa surface antigen; KEGG: rec:RHECIAT_CH0004128 hypothetical protein; 17 kDa surface antigen 3981307..3981564 Rhizobium leguminosarum bv. trifolii WSM1325 8014731 YP_002977695.1 CDS Rleg_3914 NC_012850.1 3981794 3983662 D PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rec:RHECIAT_CH0004129 outer membrane protein, protective antigen; surface antigen (D15) 3981794..3983662 Rhizobium leguminosarum bv. trifolii WSM1325 8014732 YP_002977696.1 CDS Rleg_3915 NC_012850.1 3983730 3989828 D PFAM: protein of unknown function DUF490; KEGG: rec:RHECIAT_CH0004130 hypothetical protein; hypothetical protein 3983730..3989828 Rhizobium leguminosarum bv. trifolii WSM1325 8014733 YP_002977697.1 CDS Rleg_3916 NC_012850.1 3989892 3990329 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ret:RHE_CH03850 transcriptional regulator protein; AsnC family transcriptional regulator complement(3989892..3990329) Rhizobium leguminosarum bv. trifolii WSM1325 8014734 YP_002977698.1 CDS Rleg_3917 NC_012850.1 3990454 3991389 D TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ret:RHE_CH03851 arginase protein; arginase 3990454..3991389 Rhizobium leguminosarum bv. trifolii WSM1325 8014735 YP_002977699.1 CDS rocD NC_012850.1 3991466 3992665 D TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: ret:RHE_CH03852 ornithine--oxo-acid transaminase; ornithine--oxo-acid transaminase 3991466..3992665 Rhizobium leguminosarum bv. trifolii WSM1325 8014736 YP_002977700.1 CDS Rleg_3920 NC_012850.1 3992964 3993440 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: ret:RHE_CH03853 chemotaxis signal transduction protein; CheW protein 3992964..3993440 Rhizobium leguminosarum bv. trifolii WSM1325 8014738 YP_002977701.1 CDS Rleg_3921 NC_012850.1 3993732 3995492 D KEGG: rec:RHECIAT_CH0004135 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 3993732..3995492 Rhizobium leguminosarum bv. trifolii WSM1325 8015869 YP_002977702.1 CDS Rleg_3922 NC_012850.1 3995587 3997245 R PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_L_343 hypothetical protein; major facilitator superfamily protein complement(3995587..3997245) Rhizobium leguminosarum bv. trifolii WSM1325 8015870 YP_002977703.1 CDS Rleg_3923 NC_012850.1 3997353 3997598 R KEGG: rec:RHECIAT_CH0004136 formate dehydrogenase protein, delta subunit; formate dehydrogenase subunit delta complement(3997353..3997598) Rhizobium leguminosarum bv. trifolii WSM1325 8014739 YP_002977704.1 CDS Rleg_3924 NC_012850.1 3997588 3998412 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(3997588..3998412) Rhizobium leguminosarum bv. trifolii WSM1325 8014740 YP_002977705.1 CDS Rleg_3925 NC_012850.1 3998450 4001329 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: ret:RHE_CH03857 formate dehydrogenase, alpha subunit protein; SNP /replace=T; formate dehydrogenase subunit alpha complement(3998450..4001329) Rhizobium leguminosarum bv. trifolii WSM1325 8014741 YP_002977706.1 CDS Rleg_3926 NC_012850.1 4001387 4002943 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: ret:RHE_CH03858 formate dehydrogenase, beta subunit protein; NADH dehydrogenase (quinone) complement(4001387..4002943) Rhizobium leguminosarum bv. trifolii WSM1325 8014742 YP_002977707.1 CDS Rleg_3927 NC_012850.1 4002940 4003419 R catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma complement(4002940..4003419) Rhizobium leguminosarum bv. trifolii WSM1325 8014743 YP_002977708.1 CDS Rleg_3928 NC_012850.1 4003555 4004448 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_CH03860 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4003555..4004448) Rhizobium leguminosarum bv. trifolii WSM1325 8014744 YP_002977709.1 CDS Rleg_3929 NC_012850.1 4004640 4004981 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rec:RHECIAT_CH0004142 probable transcriptional regulator protein, ArsR family; ArsR family transcriptional regulator complement(4004640..4004981) Rhizobium leguminosarum bv. trifolii WSM1325 8014745 YP_002977710.1 CDS Rleg_3930 NC_012850.1 4005085 4005909 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0004143 oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(4005085..4005909) Rhizobium leguminosarum bv. trifolii WSM1325 8014746 YP_002977711.1 CDS Rleg_3931 NC_012850.1 4005978 4006442 R KEGG: rec:RHECIAT_CH0004144 redox-sensitive transcriptional regulator-activator protein; TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(4005978..4006442) Rhizobium leguminosarum bv. trifolii WSM1325 8014747 YP_002977712.1 CDS Rleg_3932 NC_012850.1 4006526 4007122 D PFAM: NADPH-dependent FMN reductase; KEGG: reductase protein; NADPH-dependent FMN reductase 4006526..4007122 Rhizobium leguminosarum bv. trifolii WSM1325 8014748 YP_002977713.1 CDS Rleg_3933 NC_012850.1 4007471 4008103 D PFAM: YKOF domain protein; KEGG: mlo:mll1759 hypothetical protein; hypothetical protein 4007471..4008103 Rhizobium leguminosarum bv. trifolii WSM1325 8014749 YP_002977714.1 CDS Rleg_3934 NC_012850.1 4008162 4008998 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0004145 nitrate/sulfonate/bicarbonate ABC transporter, permease protein; ABC transporter permease 4008162..4008998 Rhizobium leguminosarum bv. trifolii WSM1325 8014750 YP_002977715.1 CDS Rleg_3935 NC_012850.1 4008995 4009807 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03865 nitrate/sulfonate/bicarbonate ABC transporter, ATP-binding protein; ABC transporter 4008995..4009807 Rhizobium leguminosarum bv. trifolii WSM1325 8014751 YP_002977716.1 CDS Rleg_3936 NC_012850.1 4009875 4010885 D PFAM: NMT1/THI5 like domain protein; KEGG: ret:RHE_CH03866 nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding protein; NMT1/THI5 like domain-containing protein 4009875..4010885 Rhizobium leguminosarum bv. trifolii WSM1325 8014752 YP_002977717.1 CDS Rleg_3937 NC_012850.1 4011008 4012228 D PFAM: acyltransferase; KEGG: rec:RHECIAT_CH0004148 acyltransferase protein; acyltransferase 4011008..4012228 Rhizobium leguminosarum bv. trifolii WSM1325 8014753 YP_002977718.1 CDS Rleg_3938 NC_012850.1 4012396 4013133 D PFAM: sugar transferase; KEGG: ret:RHE_CH03868 exopolysaccharide production protein; sugar transferase 4012396..4013133 Rhizobium leguminosarum bv. trifolii WSM1325 8014754 YP_002977719.1 CDS atpC NC_012850.1 4013345 4013752 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(4013345..4013752) Rhizobium leguminosarum bv. trifolii WSM1325 8014755 YP_002977720.1 CDS Rleg_3940 NC_012850.1 4013752 4013991 R KEGG: cak:Caul_4736 hypothetical protein; hypothetical protein complement(4013752..4013991) Rhizobium leguminosarum bv. trifolii WSM1325 8014756 YP_002977721.1 CDS Rleg_3941 NC_012850.1 4013991 4015427 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(4013991..4015427) Rhizobium leguminosarum bv. trifolii WSM1325 8014757 YP_002977722.1 CDS Rleg_3942 NC_012850.1 4015451 4016335 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(4015451..4016335) Rhizobium leguminosarum bv. trifolii WSM1325 8014758 YP_002977723.1 CDS Rleg_3943 NC_012850.1 4016364 4017893 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(4016364..4017893) Rhizobium leguminosarum bv. trifolii WSM1325 8014759 YP_002977724.1 CDS Rleg_3944 NC_012850.1 4017893 4018459 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(4017893..4018459) Rhizobium leguminosarum bv. trifolii WSM1325 8014760 YP_002977725.1 CDS Rleg_3945 NC_012850.1 4018715 4019104 R KEGG: ret:RHE_CH03874 hypothetical protein; hypothetical protein complement(4018715..4019104) Rhizobium leguminosarum bv. trifolii WSM1325 8014761 YP_002977726.1 CDS Rleg_3946 NC_012850.1 4019185 4021401 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(4019185..4021401) Rhizobium leguminosarum bv. trifolii WSM1325 8015871 YP_002977727.1 CDS Rleg_3947 NC_012850.1 4021507 4022394 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: oligopeptide ABC transporter ; K02032 peptide/nickel transport system ATP-binding protein; ABC transporter complement(4021507..4022394) Rhizobium leguminosarum bv. trifolii WSM1325 8014762 YP_002977728.1 CDS Rleg_3948 NC_012850.1 4022391 4023425 R KEGG: oligopeptide ABC transporter ; K02031 peptide/nickel transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase complement(4022391..4023425) Rhizobium leguminosarum bv. trifolii WSM1325 8014763 YP_002977729.1 CDS Rleg_3949 NC_012850.1 4023430 4024287 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00192 oligopeptide ABC transporter, permease protein; ABC transporter permease complement(4023430..4024287) Rhizobium leguminosarum bv. trifolii WSM1325 8014764 YP_002977730.1 CDS Rleg_3950 NC_012850.1 4024294 4025298 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000149 ABC transporter, permease protein; ABC transporter permease complement(4024294..4025298) Rhizobium leguminosarum bv. trifolii WSM1325 8014765 YP_002977731.1 CDS Rleg_3951 NC_012850.1 4025366 4027267 R PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_PE00194 oligopeptide ABC transporter, ATP-binding protein; family 5 extracellular solute-binding protein complement(4025366..4027267) Rhizobium leguminosarum bv. trifolii WSM1325 8014766 YP_002977732.1 CDS Rleg_3952 NC_012850.1 4027618 4029246 D PFAM: glycoside hydrolase family 39; KEGG: sus:Acid_3646 glycoside hydrolase family protein; glycoside hydrolase 4027618..4029246 Rhizobium leguminosarum bv. trifolii WSM1325 8014767 YP_002977733.1 CDS Rleg_3953 NC_012850.1 4029302 4029973 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mlo:mlr2114 transcriptional regulator; GntR family transcriptional regulator complement(4029302..4029973) Rhizobium leguminosarum bv. trifolii WSM1325 8014768 YP_002977734.1 CDS Rleg_3954 NC_012850.1 4030106 4031131 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pol:Bpro_3819 oxidoreductase-like; oxidoreductase domain-containing protein complement(4030106..4031131) Rhizobium leguminosarum bv. trifolii WSM1325 8014769 YP_002977735.1 CDS Rleg_3955 NC_012850.1 4031372 4033084 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 4031372..4033084 Rhizobium leguminosarum bv. trifolii WSM1325 8014770 YP_002977736.1 CDS Rleg_3956 NC_012850.1 4033081 4033953 D PFAM: amidohydrolase 2; KEGG: mes:Meso_3756 amidohydrolase 2; amidohydrolase 4033081..4033953 Rhizobium leguminosarum bv. trifolii WSM1325 8014771 YP_002977737.1 CDS Rleg_3957 NC_012850.1 4033968 4034900 D PFAM: dihydrodipicolinate synthetase; KEGG: ret:RHE_CH03876 dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase 4033968..4034900 Rhizobium leguminosarum bv. trifolii WSM1325 8014772 YP_002977738.1 CDS Rleg_3958 NC_012850.1 4034881 4035378 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0004159 acetyltransferase protein, GNAT family; N-acetyltransferase GCN5 complement(4034881..4035378) Rhizobium leguminosarum bv. trifolii WSM1325 8014773 YP_002977739.1 CDS Rleg_3959 NC_012850.1 4035393 4036343 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rec:RHECIAT_CH0004160 acyltransferase protein; phospholipid/glycerol acyltransferase complement(4035393..4036343) Rhizobium leguminosarum bv. trifolii WSM1325 8015872 YP_002977740.1 CDS xerC NC_012850.1 4036483 4037418 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 4036483..4037418 Rhizobium leguminosarum bv. trifolii WSM1325 8014774 YP_002977741.1 CDS Rleg_3961 NC_012850.1 4037608 4038684 D PFAM: GumN family protein; KEGG: rec:RHECIAT_CH0004162 hypothetical protein; GumN family protein 4037608..4038684 Rhizobium leguminosarum bv. trifolii WSM1325 8014775 YP_002977742.1 CDS Rleg_3962 NC_012850.1 4038715 4039272 D hypothetical protein 4038715..4039272 Rhizobium leguminosarum bv. trifolii WSM1325 8014776 YP_002977743.1 CDS Rleg_3963 NC_012850.1 4039342 4039842 R PFAM: cytochrome B561; KEGG: rec:RHECIAT_CH0004163 probable cytochrome b561 protein; cytochrome B561 complement(4039342..4039842) Rhizobium leguminosarum bv. trifolii WSM1325 8014777 YP_002977744.1 CDS Rleg_3964 NC_012850.1 4039944 4041350 R Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(4039944..4041350) Rhizobium leguminosarum bv. trifolii WSM1325 8014778 YP_002977745.1 CDS Rleg_3965 NC_012850.1 4041449 4042201 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH03884 oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(4041449..4042201) Rhizobium leguminosarum bv. trifolii WSM1325 8014779 YP_002977746.1 CDS Rleg_3966 NC_012850.1 4042198 4042728 R KEGG: rec:RHECIAT_CH0004166 hypothetical protein; hypothetical protein complement(4042198..4042728) Rhizobium leguminosarum bv. trifolii WSM1325 8014780 YP_002977747.1 CDS Rleg_3967 NC_012850.1 4042725 4043474 R KEGG: ret:RHE_CH03886 hypothetical protein; hypothetical protein complement(4042725..4043474) Rhizobium leguminosarum bv. trifolii WSM1325 8014781 YP_002977748.1 CDS Rleg_3968 NC_012850.1 4043488 4044750 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(4043488..4044750) Rhizobium leguminosarum bv. trifolii WSM1325 8014782 YP_002977749.1 CDS Rleg_3969 NC_012850.1 4044790 4045098 R PFAM: YCII-related; KEGG: rec:RHECIAT_CH0004169 hypothetical protein; hypothetical protein complement(4044790..4045098) Rhizobium leguminosarum bv. trifolii WSM1325 8014783 YP_002977750.1 CDS sucA NC_012850.1 4045114 4048098 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(4045114..4048098) Rhizobium leguminosarum bv. trifolii WSM1325 8014784 YP_002977751.1 CDS Rleg_3971 NC_012850.1 4048270 4049172 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(4048270..4049172) Rhizobium leguminosarum bv. trifolii WSM1325 8015873 YP_002977752.1 CDS Rleg_3972 NC_012850.1 4049186 4049677 R KEGG: rec:RHECIAT_CH0004172 hypothetical protein; hypothetical protein complement(4049186..4049677) Rhizobium leguminosarum bv. trifolii WSM1325 8014785 YP_002977753.1 CDS sucC NC_012850.1 4049686 4050879 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(4049686..4050879) Rhizobium leguminosarum bv. trifolii WSM1325 8014786 YP_002977754.1 CDS Rleg_3974 NC_012850.1 4050914 4051876 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(4050914..4051876) Rhizobium leguminosarum bv. trifolii WSM1325 8015874 YP_002977755.1 CDS Rleg_3975 NC_012850.1 4052053 4053216 R PFAM: AFG1-family ATPase; KEGG: rec:RHECIAT_CH0004175 ATP-binding protein; AFG1 family ATPase complement(4052053..4053216) Rhizobium leguminosarum bv. trifolii WSM1325 8014787 YP_002977756.1 CDS Rleg_3976 NC_012850.1 4053265 4053780 R PFAM: outer membrane lipoprotein omp19; KEGG: rec:RHECIAT_CH0004176 outer membrane lipoprotein; outer membrane lipoprotein omp19 complement(4053265..4053780) Rhizobium leguminosarum bv. trifolii WSM1325 8014788 YP_002977757.1 CDS sdhB NC_012850.1 4054155 4054934 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(4054155..4054934) Rhizobium leguminosarum bv. trifolii WSM1325 8014789 YP_002977758.1 CDS sdhA NC_012850.1 4054953 4056794 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(4054953..4056794) Rhizobium leguminosarum bv. trifolii WSM1325 8014790 YP_002977759.1 CDS Rleg_3979 NC_012850.1 4056801 4057181 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rec:RHECIAT_CH0004180 succinate dehydrogenase protein, membrane anchor subunit; succinate dehydrogenase, hydrophobic membrane anchor protein complement(4056801..4057181) Rhizobium leguminosarum bv. trifolii WSM1325 8014791 YP_002977760.1 CDS Rleg_3980 NC_012850.1 4057192 4057587 R TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rec:RHECIAT_CH0004181 succinate dehydrogenase protein, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit complement(4057192..4057587) Rhizobium leguminosarum bv. trifolii WSM1325 8014792 YP_002977761.1 CDS Rleg_3981 NC_012850.1 4057903 4058394 D KEGG: rec:RHECIAT_CH0004182 hypothetical protein; hypothetical protein 4057903..4058394 Rhizobium leguminosarum bv. trifolii WSM1325 8014793 YP_002977762.1 CDS Rleg_3982 NC_012850.1 4058522 4058875 R PFAM: endoribonuclease L-PSP; KEGG: mpo:Mpop_4502 endoribonuclease L-PSP; endoribonuclease L-PSP complement(4058522..4058875) Rhizobium leguminosarum bv. trifolii WSM1325 8014794 YP_002977763.1 CDS Rleg_3983 NC_012850.1 4059271 4060128 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_2019 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4059271..4060128) Rhizobium leguminosarum bv. trifolii WSM1325 8014795 YP_002977764.1 CDS Rleg_3984 NC_012850.1 4060274 4061338 R PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mlr6534 ABC transporter, polyamine transport protein, ATP-binding protein; ABC transporter complement(4060274..4061338) Rhizobium leguminosarum bv. trifolii WSM1325 8014796 YP_002977765.1 CDS Rleg_3985 NC_012850.1 4061349 4062188 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2723 ABC transporter permease protein; ABC transporter permease complement(4061349..4062188) Rhizobium leguminosarum bv. trifolii WSM1325 8014797 YP_002977766.1 CDS Rleg_3986 NC_012850.1 4062185 4063069 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1970 ABC transporter permease protein 2; ABC transporter permease complement(4062185..4063069) Rhizobium leguminosarum bv. trifolii WSM1325 8015875 YP_002977767.1 CDS Rleg_3987 NC_012850.1 4063158 4064234 R KEGG: azc:AZC_1637 ABC transporter substrate binding protein; Spermidine/putrescine-binding periplasmic protein-like protein complement(4063158..4064234) Rhizobium leguminosarum bv. trifolii WSM1325 8014798 YP_002977768.1 CDS Rleg_3988 NC_012850.1 4064562 4065557 D TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pol:Bpro_2025 agmatinase; agmatinase 4064562..4065557 Rhizobium leguminosarum bv. trifolii WSM1325 8014799 YP_002977769.1 CDS Rleg_3989 NC_012850.1 4065642 4066439 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mlo:mlr4897 amino acid ABC transporter, periplasmic binding protein; family 3 extracellular solute-binding protein 4065642..4066439 Rhizobium leguminosarum bv. trifolii WSM1325 8014800 YP_002977770.1 CDS Rleg_3990 NC_012850.1 4066584 4067252 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr4898 amino acid ABC transporter, permease protein; polar amino acid ABC transcriptional regulator inner membrane protein 4066584..4067252 Rhizobium leguminosarum bv. trifolii WSM1325 8014801 YP_002977771.1 CDS Rleg_3991 NC_012850.1 4067249 4067896 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr4899 amino acid ABC transporter, permease protein; polar amino acid ABC transcriptional regulator inner membrane protein 4067249..4067896 Rhizobium leguminosarum bv. trifolii WSM1325 8014802 YP_002977772.1 CDS Rleg_3992 NC_012850.1 4068054 4069025 D catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 4068054..4069025 Rhizobium leguminosarum bv. trifolii WSM1325 8014803 YP_002977773.1 CDS Rleg_3993 NC_012850.1 4069137 4070987 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nocR; transcriptional regulator LysR family; LysR family transcriptional regulator 4069137..4070987 Rhizobium leguminosarum bv. trifolii WSM1325 8015876 YP_002977774.1 CDS Rleg_3994 NC_012850.1 4071145 4072587 D TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; SNP /replace=A; UbiD family decarboxylase 4071145..4072587 Rhizobium leguminosarum bv. trifolii WSM1325 8014804 YP_002977775.1 CDS Rleg_3995 NC_012850.1 4072584 4073159 D TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: 3-polyprenyl-4-hydroxybenzoate decarboxylase ; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4072584..4073159 Rhizobium leguminosarum bv. trifolii WSM1325 8014805 YP_002977776.1 CDS Rleg_3996 NC_012850.1 4073267 4074877 D PFAM: extracellular solute-binding protein family 5; KEGG: dppA; ABC transporter substrate binding protein (dipeptide) ; K02035 peptide/nickel transport system substrate-binding protein; family 5 extracellular solute-binding protein 4073267..4074877 Rhizobium leguminosarum bv. trifolii WSM1325 8014806 YP_002977777.1 CDS Rleg_3997 NC_012850.1 4075029 4075961 D KEGG: carboxyphosphonoenolpyruvate phosphonomutase; SNP /replace=G; carboxyphosphonoenolpyruvate phosphonomutase 4075029..4075961 Rhizobium leguminosarum bv. trifolii WSM1325 8015877 YP_002977778.1 CDS Rleg_3998 NC_012850.1 4076059 4077024 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppB; ABC transporter membrane spanning protein (dipeptide) ; K02033 peptide/nickel transport system permease protein; ABC transporter permease 4076059..4077024 Rhizobium leguminosarum bv. trifolii WSM1325 8014807 YP_002977779.1 CDS Rleg_3999 NC_012850.1 4077021 4077944 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppC; ABC transporter membrane spanning protein (dipeptide); ABC transporter permease 4077021..4077944 Rhizobium leguminosarum bv. trifolii WSM1325 8014808 YP_002977780.1 CDS Rleg_4000 NC_012850.1 4077946 4078977 D KEGG: ABC transporter nucleotide binding/ATPase protein (oligopeptide) ; K02031 peptide/nickel transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 4077946..4078977 Rhizobium leguminosarum bv. trifolii WSM1325 8014809 YP_002977781.1 CDS Rleg_4001 NC_012850.1 4078974 4080041 D KEGG: ABC transporter nucleotide binding/ATPase protein (oligopeptide) ; K02032 peptide/nickel transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 4078974..4080041 Rhizobium leguminosarum bv. trifolii WSM1325 8014810 YP_002977782.1 CDS Rleg_4002 NC_012850.1 4080041 4080637 D KEGG: hypothetical protein; hypothetical protein 4080041..4080637 Rhizobium leguminosarum bv. trifolii WSM1325 8014811 YP_002977783.1 CDS Rleg_4003 NC_012850.1 4080634 4080816 D KEGG: allantoinase protein; hypothetical protein 4080634..4080816 Rhizobium leguminosarum bv. trifolii WSM1325 8014812 YP_002977784.1 CDS Rleg_4004 NC_012850.1 4080813 4082426 D KEGG: hutH; histidine ammonia-lyase ; K01745 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 4080813..4082426 Rhizobium leguminosarum bv. trifolii WSM1325 8014813 YP_002977785.1 CDS Rleg_4005 NC_012850.1 4082512 4083702 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4082512..4083702 Rhizobium leguminosarum bv. trifolii WSM1325 8014814 YP_002977786.1 CDS Rleg_4006 NC_012850.1 4083809 4085605 D PFAM: amidohydrolase; KEGG: ade; adenine deaminase ; K01486 adenine deaminase; adenine deaminase 4083809..4085605 Rhizobium leguminosarum bv. trifolii WSM1325 8014815 YP_002977787.1 CDS Rleg_4007 NC_012850.1 4085678 4085935 R KEGG: rec:RHECIAT_CH0000226 hypothetical protein; hypothetical protein complement(4085678..4085935) Rhizobium leguminosarum bv. trifolii WSM1325 8014816 YP_002977788.1 CDS Rleg_4008 NC_012850.1 4086157 4087155 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: C4-dicarboxylate-binding protein; TRAP dicarboxylate transporter subunit DctP 4086157..4087155 Rhizobium leguminosarum bv. trifolii WSM1325 8014817 YP_002977789.1 CDS Rleg_4009 NC_012850.1 4087250 4087714 D KEGG: C4-dicarboxylate transport system; C4-dicarboxylate transport system 4087250..4087714 Rhizobium leguminosarum bv. trifolii WSM1325 8014818 YP_002977790.1 CDS Rleg_4010 NC_012850.1 4087711 4088997 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: C4-dicarboxylate transport system; TRAP dicarboxylate transporter subunit DctM 4087711..4088997 Rhizobium leguminosarum bv. trifolii WSM1325 8015878 YP_002977791.1 CDS Rleg_4011 NC_012850.1 4089033 4090268 D PFAM: aminotransferase class-III; KEGG: 4-aminobutyrate aminotransferase protein ; K01845 glutamate-1-semialdehyde 2,1-aminomutase; class III aminotransferase 4089033..4090268 Rhizobium leguminosarum bv. trifolii WSM1325 8014819 YP_002977792.1 CDS Rleg_4012 NC_012850.1 4090362 4091219 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psp:PSPPH_2772 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4090362..4091219) Rhizobium leguminosarum bv. trifolii WSM1325 8014820 YP_002977793.1 CDS Rleg_4013 NC_012850.1 4091559 4093238 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_1615 glycoside hydrolase family 3 protein; beta-N-acetylhexosaminidase complement(4091559..4093238) Rhizobium leguminosarum bv. trifolii WSM1325 8014821 YP_002977794.1 CDS Rleg_4014 NC_012850.1 4093290 4093433 R hypothetical protein complement(4093290..4093433) Rhizobium leguminosarum bv. trifolii WSM1325 8015879 YP_002977795.1 CDS Rleg_4015 NC_012850.1 4093452 4094099 R KEGG: rec:RHECIAT_CH0004183 methyltransferase protein; methyltransferase protein complement(4093452..4094099) Rhizobium leguminosarum bv. trifolii WSM1325 8014822 YP_002977796.1 CDS Rleg_4016 NC_012850.1 4094096 4094527 R PFAM: protein of unknown function DUF55; KEGG: rec:RHECIAT_CH0004184 hypothetical protein; hypothetical protein complement(4094096..4094527) Rhizobium leguminosarum bv. trifolii WSM1325 8014823 YP_002977797.1 CDS Rleg_4017 NC_012850.1 4094530 4094823 R unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein complement(4094530..4094823) Rhizobium leguminosarum bv. trifolii WSM1325 8015880 YP_002977798.1 CDS gpsA NC_012850.1 4094833 4095816 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(4094833..4095816) Rhizobium leguminosarum bv. trifolii WSM1325 8014824 YP_002977799.1 CDS Rleg_4019 NC_012850.1 4095813 4096934 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(4095813..4096934) Rhizobium leguminosarum bv. trifolii WSM1325 8014825 YP_002977800.1 CDS hemC NC_012850.1 4097007 4097936 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 4097007..4097936 Rhizobium leguminosarum bv. trifolii WSM1325 8014826 YP_002977801.1 CDS Rleg_4021 NC_012850.1 4097944 4098651 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; uroporphyrinogen-III synthase 4097944..4098651 Rhizobium leguminosarum bv. trifolii WSM1325 8014827 YP_002977802.1 CDS Rleg_4022 NC_012850.1 4098741 4099991 D KEGG: rec:RHECIAT_CH0004190 hypothetical protein; hypothetical protein 4098741..4099991 Rhizobium leguminosarum bv. trifolii WSM1325 8014828 YP_002977803.1 CDS Rleg_4023 NC_012850.1 4099996 4101630 D PFAM: HemY domain protein; KEGG: ret:RHE_CH03907 hypothetical protein; HemY domain-containing protein 4099996..4101630 Rhizobium leguminosarum bv. trifolii WSM1325 8014829 YP_002977804.1 CDS Rleg_4024 NC_012850.1 4101648 4102133 D PFAM: protein of unknown function DUF1332; KEGG: ret:RHE_CH03908 hypothetical protein; hypothetical protein 4101648..4102133 Rhizobium leguminosarum bv. trifolii WSM1325 8014830 YP_002977805.1 CDS Rleg_4025 NC_012850.1 4102120 4102875 D Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 4102120..4102875 Rhizobium leguminosarum bv. trifolii WSM1325 8014831 YP_002977806.1 CDS Rleg_4026 NC_012850.1 4102882 4104132 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0004194 permease protein; major facilitator superfamily protein complement(4102882..4104132) Rhizobium leguminosarum bv. trifolii WSM1325 8014832 YP_002977807.1 CDS Rleg_4027 NC_012850.1 4104272 4104562 D PFAM: protein of unknown function YGGT; KEGG: rec:RHECIAT_CH0004195 hypothetical conserved membrane protein; hypothetical protein 4104272..4104562 Rhizobium leguminosarum bv. trifolii WSM1325 8014833 YP_002977808.1 CDS Rleg_4028 NC_012850.1 4104559 4104870 D PFAM: protein of unknown function DUF167; KEGG: ret:RHE_CH03912 hypothetical protein; hypothetical protein 4104559..4104870 Rhizobium leguminosarum bv. trifolii WSM1325 8014834 YP_002977809.1 CDS Rleg_4029 NC_012850.1 4104875 4105408 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(4104875..4105408) Rhizobium leguminosarum bv. trifolii WSM1325 8014835 YP_002977810.1 CDS Rleg_4030 NC_012850.1 4105603 4106109 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0004198 acetyltransferase protein; N-acetyltransferase GCN5 complement(4105603..4106109) Rhizobium leguminosarum bv. trifolii WSM1325 8014836 YP_002977811.1 CDS Rleg_4031 NC_012850.1 4106357 4108177 R TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: rec:RHECIAT_CH0004199 GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A) protein; GTP-binding protein TypA complement(4106357..4108177) Rhizobium leguminosarum bv. trifolii WSM1325 8014837 YP_002977812.1 CDS Rleg_4032 NC_012850.1 4108335 4110422 R PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: rec:RHECIAT_CH0004200 peptidyl-dipeptidase protein; peptidyl-dipeptidase Dcp complement(4108335..4110422) Rhizobium leguminosarum bv. trifolii WSM1325 8014838 YP_002977813.1 CDS Rleg_4033 NC_012850.1 4110652 4111083 D KEGG: ret:RHE_CH03917 hypothetical protein; hypothetical protein 4110652..4111083 Rhizobium leguminosarum bv. trifolii WSM1325 8014839 YP_002977814.1 CDS Rleg_4034 NC_012850.1 4111110 4111751 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0004202 amino acid efflux protein; lysine exporter protein LysE/YggA complement(4111110..4111751) Rhizobium leguminosarum bv. trifolii WSM1325 8015881 YP_002977815.1 CDS Rleg_4035 NC_012850.1 4112005 4114845 R PFAM: transcriptional regulator domain protein; SMART: AAA ATPase; KEGG: mlo:mlr6681 transcriptional regulator; transcriptional regulator complement(4112005..4114845) Rhizobium leguminosarum bv. trifolii WSM1325 8014840 YP_002977816.1 CDS Rleg_4036 NC_012850.1 4114933 4115352 R PFAM: OsmC family protein; KEGG: mlo:mll6679 stress-induced protein; OsmC family protein complement(4114933..4115352) Rhizobium leguminosarum bv. trifolii WSM1325 8014841 YP_002977817.1 CDS Rleg_4037 NC_012850.1 4115404 4116711 R PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bja:bll6264 hydrolase; epoxide hydrolase domain-containing protein complement(4115404..4116711) Rhizobium leguminosarum bv. trifolii WSM1325 8014842 YP_002977818.1 CDS Rleg_4038 NC_012850.1 4117028 4117423 D PFAM: OsmC family protein; KEGG: bja:bll4012 organic hydroperoxide resistance protein; OsmC family protein 4117028..4117423 Rhizobium leguminosarum bv. trifolii WSM1325 8014843 YP_002977819.1 CDS Rleg_4039 NC_012850.1 4117529 4118539 D KEGG: ret:RHE_CH02543 adenylate cyclase protein; adenylate cyclase protein 4117529..4118539 Rhizobium leguminosarum bv. trifolii WSM1325 8014844 YP_002977820.1 CDS Rleg_4040 NC_012850.1 4118856 4120079 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(4118856..4120079) Rhizobium leguminosarum bv. trifolii WSM1325 8014845 YP_002977821.1 CDS Rleg_4041 NC_012850.1 4120258 4121109 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_CH0004208 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR 4120258..4121109 Rhizobium leguminosarum bv. trifolii WSM1325 8014846 YP_002977822.1 CDS Rleg_4042 NC_012850.1 4121195 4121836 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0004209 amino acid efflux protein, LysE family; lysine exporter protein LysE/YggA 4121195..4121836 Rhizobium leguminosarum bv. trifolii WSM1325 8014847 YP_002977823.1 CDS Rleg_4043 NC_012850.1 4122148 4122513 D KEGG: bja:bll6557 hypothetical protein; hypothetical protein 4122148..4122513 Rhizobium leguminosarum bv. trifolii WSM1325 8014848 YP_002977824.1 CDS Rleg_4044 NC_012850.1 4122586 4123380 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03927 ABC transporter, ATP-binding protein; ABC transporter complement(4122586..4123380) Rhizobium leguminosarum bv. trifolii WSM1325 8014849 YP_002977825.1 CDS Rleg_4045 NC_012850.1 4123377 4124255 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0004211 sugar ABC transporter, permease protein; inner-membrane translocator complement(4123377..4124255) Rhizobium leguminosarum bv. trifolii WSM1325 8014850 YP_002977826.1 CDS Rleg_4046 NC_012850.1 4124386 4125339 R PFAM: protein of unknown function DUF534; KEGG: ret:RHE_CH03929 ABC transporter, substrate-binding protein; hypothetical protein complement(4124386..4125339) Rhizobium leguminosarum bv. trifolii WSM1325 8014851 YP_002977827.1 CDS Rleg_4047 NC_012850.1 4125433 4126662 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rec:RHECIAT_CH0004213 hypothetical protein; radical SAM enzyme, Cfr family complement(4125433..4126662) Rhizobium leguminosarum bv. trifolii WSM1325 8014852 YP_002977828.1 CDS Rleg_4048 NC_012850.1 4126908 4127417 R KEGG: ret:RHE_CH03931 hypothetical protein; hypothetical protein complement(4126908..4127417) Rhizobium leguminosarum bv. trifolii WSM1325 8014853 YP_002977829.1 CDS Rleg_4049 NC_012850.1 4127754 4128314 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rec:RHECIAT_CH0004215 probable RNA polymerase sigma factor protein (sigma-70), ECF family; ECF subfamily RNA polymerase sigma-24 subunit 4127754..4128314 Rhizobium leguminosarum bv. trifolii WSM1325 8014854 YP_002977830.1 CDS Rleg_4050 NC_012850.1 4128371 4128763 R PFAM: protein of unknown function DUF1232; KEGG: rec:RHECIAT_CH0004216 hypothetical protein; hypothetical protein complement(4128371..4128763) Rhizobium leguminosarum bv. trifolii WSM1325 8014855 YP_002977831.1 CDS phhB NC_012850.1 4128844 4129149 R 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase complement(4128844..4129149) Rhizobium leguminosarum bv. trifolii WSM1325 8015882 YP_002977832.1 CDS Rleg_4052 NC_012850.1 4129185 4129685 D PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: ret:RHE_CH03935 tyrosine phosphatase protein; protein tyrosine phosphatase 4129185..4129685 Rhizobium leguminosarum bv. trifolii WSM1325 8014856 YP_002977833.1 CDS Rleg_4053 NC_012850.1 4129592 4130185 R TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: rec:RHECIAT_CH0004219 2'-5' RNA ligase protein; 2'-5' RNA ligase complement(4129592..4130185) Rhizobium leguminosarum bv. trifolii WSM1325 8014857 YP_002977834.1 CDS Rleg_4054 NC_012850.1 4130254 4130898 R PFAM: lipolytic protein G-D-S-L family; KEGG: rec:RHECIAT_CH0004220 probable acyl-CoA thioesterase protein; G-D-S-L family lipolytic protein complement(4130254..4130898) Rhizobium leguminosarum bv. trifolii WSM1325 8014858 YP_002977835.1 CDS Rleg_4055 NC_012850.1 4130970 4131677 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03938 ABC transporter, ATP-binding protein (involved in lysophospholipase L1 biosynthesis); ABC transporter 4130970..4131677 Rhizobium leguminosarum bv. trifolii WSM1325 8014859 YP_002977836.1 CDS Rleg_4056 NC_012850.1 4131674 4134217 D PFAM: protein of unknown function DUF214; KEGG: ret:RHE_CH03939 ABC transporter, permease protein (involved in lysophospholipase L1 biosynthesis); hypothetical protein 4131674..4134217 Rhizobium leguminosarum bv. trifolii WSM1325 8014860 YP_002977837.1 CDS Rleg_4057 NC_012850.1 4134398 4135126 D PFAM: protein of unknown function UPF0005; KEGG: rec:RHECIAT_CH0004223 hypothetical conserved membrane protein; hypothetical protein 4134398..4135126 Rhizobium leguminosarum bv. trifolii WSM1325 8014861 YP_002977838.1 CDS Rleg_4058 NC_012850.1 4135192 4135794 D PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH03941 phosphinothricin N-acetyltransferase (antibiotic resistance) protein; N-acetyltransferase GCN5 4135192..4135794 Rhizobium leguminosarum bv. trifolii WSM1325 8014862 YP_002977839.1 CDS Rleg_4059 NC_012850.1 4135801 4136211 R KEGG: rec:RHECIAT_CH0004225 hypothetical protein; hypothetical protein complement(4135801..4136211) Rhizobium leguminosarum bv. trifolii WSM1325 8014863 YP_002977840.1 CDS Rleg_4060 NC_012850.1 4136518 4137258 R PFAM: protein of unknown function DUF1223; KEGG: ret:RHE_CH03943 hypothetical protein; hypothetical protein complement(4136518..4137258) Rhizobium leguminosarum bv. trifolii WSM1325 8014864 YP_002977841.1 CDS Rleg_4061 NC_012850.1 4137493 4140183 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(4137493..4140183) Rhizobium leguminosarum bv. trifolii WSM1325 8014865 YP_002977842.1 CDS Rleg_4062 NC_012850.1 4140446 4141093 D ATP-binding protein; required for proper cytochrome C maturation; cytochrome C biogenesis protein CcmA 4140446..4141093 Rhizobium leguminosarum bv. trifolii WSM1325 8014866 YP_002977843.1 CDS Rleg_4063 NC_012850.1 4141146 4141805 D TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome C-type biogenesis protein CcmB; KEGG: rec:RHECIAT_CH0004229 heme ABC transporter, permease protein (involved in cytochrome C biogenesis); heme exporter protein CcmB 4141146..4141805 Rhizobium leguminosarum bv. trifolii WSM1325 8014867 YP_002977844.1 CDS Rleg_4064 NC_012850.1 4141854 4142615 D TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein; KEGG: ret:RHE_CH03948 heme ABC transporter, permease protein (involved in cytochrome-c biogenesis); heme exporter protein CcmC 4141854..4142615 Rhizobium leguminosarum bv. trifolii WSM1325 8014868 YP_002977845.1 CDS Rleg_4065 NC_012850.1 4142618 4142797 D TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: rec:RHECIAT_CH0004231 probable heme transporter protein (involved in cytochrome C biogenesis); heme exporter protein CcmD 4142618..4142797 Rhizobium leguminosarum bv. trifolii WSM1325 8014869 YP_002977846.1 CDS Rleg_4066 NC_012850.1 4142794 4143402 D TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ret:RHE_CH03950 thiol disulfide interchange protein (involved in cytochrome-c biogenesis); protein thiol/disulfide oxidoreductase DsbE 4142794..4143402 Rhizobium leguminosarum bv. trifolii WSM1325 8014870 YP_002977847.1 CDS Rleg_4067 NC_012850.1 4143422 4144009 R KEGG: rec:RHECIAT_CH0004233 hypothetical protein; hypothetical protein complement(4143422..4144009) Rhizobium leguminosarum bv. trifolii WSM1325 8014871 YP_002977848.1 CDS Rleg_4068 NC_012850.1 4144006 4144650 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(4144006..4144650) Rhizobium leguminosarum bv. trifolii WSM1325 8015883 YP_002977849.1 CDS Rleg_4069 NC_012850.1 4144726 4146327 R KEGG: ret:RHE_CH03953 cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(4144726..4146327) Rhizobium leguminosarum bv. trifolii WSM1325 8014872 YP_002977850.1 CDS Rleg_4070 NC_012850.1 4146344 4147618 R KEGG: rec:RHECIAT_CH0004236 methylase protein (RNA modification enzyme), MiaB family; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme complement(4146344..4147618) Rhizobium leguminosarum bv. trifolii WSM1325 8014873 YP_002977851.1 CDS dapF NC_012850.1 4147615 4148520 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(4147615..4148520) Rhizobium leguminosarum bv. trifolii WSM1325 8015884 YP_002977852.1 CDS Rleg_4072 NC_012850.1 4148639 4148842 R KEGG: ret:RHE_CH03956 hypothetical protein; hypothetical protein complement(4148639..4148842) Rhizobium leguminosarum bv. trifolii WSM1325 8014874 YP_002977853.1 CDS Rleg_4073 NC_012850.1 4149357 4150934 D KEGG: rec:RHECIAT_CH0004239 signal recognition particle GTP-binding protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 4149357..4150934 Rhizobium leguminosarum bv. trifolii WSM1325 8014875 YP_002977854.1 CDS Rleg_4074 NC_012850.1 4150951 4151271 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 4150951..4151271 Rhizobium leguminosarum bv. trifolii WSM1325 8014876 YP_002977855.1 CDS rpsP NC_012850.1 4151321 4151692 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 4151321..4151692 Rhizobium leguminosarum bv. trifolii WSM1325 8015885 YP_002977856.1 CDS rimM NC_012850.1 4151806 4152375 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 4151806..4152375 Rhizobium leguminosarum bv. trifolii WSM1325 8014877 YP_002977857.1 CDS trmD NC_012850.1 4152375 4153106 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 4152375..4153106 Rhizobium leguminosarum bv. trifolii WSM1325 8014878 YP_002977858.1 CDS rplS NC_012850.1 4153391 4153945 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 4153391..4153945 Rhizobium leguminosarum bv. trifolii WSM1325 8014879 YP_002977859.1 CDS Rleg_4079 NC_012850.1 4154090 4154887 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: rec:RHECIAT_CH0004245 amino acid ABC transporter, substrate-binding protein; family 3 extracellular solute-binding protein 4154090..4154887 Rhizobium leguminosarum bv. trifolii WSM1325 8014880 YP_002977860.1 CDS Rleg_4080 NC_012850.1 4154904 4155716 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0004246 amino acid ABC transporter, permease protein; polar amino acid ABC transcriptional regulator inner membrane protein 4154904..4155716 Rhizobium leguminosarum bv. trifolii WSM1325 8015886 YP_002977861.1 CDS Rleg_4081 NC_012850.1 4155788 4156150 D hypothetical protein 4155788..4156150 Rhizobium leguminosarum bv. trifolii WSM1325 8014881 YP_002977862.1 CDS Rleg_4082 NC_012850.1 4156147 4156500 D KEGG: met:M446_6749 hypothetical protein; hypothetical protein 4156147..4156500 Rhizobium leguminosarum bv. trifolii WSM1325 8014882 YP_002977863.1 CDS Rleg_4083 NC_012850.1 4156601 4156726 D KEGG: atu:Atu8028 hypothetical protein; hypothetical protein 4156601..4156726 Rhizobium leguminosarum bv. trifolii WSM1325 8015887 YP_002977864.1 CDS Rleg_4084 NC_012850.1 4156802 4158211 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 4156802..4158211 Rhizobium leguminosarum bv. trifolii WSM1325 8014883 YP_002977865.1 CDS Rleg_4085 NC_012850.1 4158633 4158986 D KEGG: rec:RHECIAT_CH0004248 transporter protein; transporter protein 4158633..4158986 Rhizobium leguminosarum bv. trifolii WSM1325 8014884 YP_002977866.1 CDS Rleg_4086 NC_012850.1 4159073 4159903 R PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0004249 probable 2,5-didehydrogluconate reductase protein; aldo/keto reductase complement(4159073..4159903) Rhizobium leguminosarum bv. trifolii WSM1325 8014885 YP_002977867.1 CDS Rleg_4087 NC_012850.1 4160035 4160556 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_CH03967 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(4160035..4160556) Rhizobium leguminosarum bv. trifolii WSM1325 8014886 YP_002977868.1 CDS Rleg_4088 NC_012850.1 4160724 4161407 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ret:RHE_CH03968 two-component response regulator protein; transcriptional regulator 4160724..4161407 Rhizobium leguminosarum bv. trifolii WSM1325 8014887 YP_002977869.1 CDS Rleg_4089 NC_012850.1 4161522 4161977 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ret:RHE_CH03969 cAMP-dependent kinase protein; Crp/Fnr family transcriptional regulator 4161522..4161977 Rhizobium leguminosarum bv. trifolii WSM1325 8014888 YP_002977870.1 CDS Rleg_4090 NC_012850.1 4162027 4162830 R TIGRFAM: exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: rec:RHECIAT_CH0004253 exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth complement(4162027..4162830) Rhizobium leguminosarum bv. trifolii WSM1325 8014889 YP_002977871.1 CDS Rleg_4091 NC_012850.1 4163082 4163750 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: rec:RHECIAT_CH0004254 outer membrane lipoproteins carrier protein; outer membrane lipoprotein carrier protein LolA complement(4163082..4163750) Rhizobium leguminosarum bv. trifolii WSM1325 8014890 YP_002977872.1 CDS Rleg_4092 NC_012850.1 4163890 4166559 R PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004255 cell division protein; SNP /replace=C; cell division protein FtsK complement(4163890..4166559) Rhizobium leguminosarum bv. trifolii WSM1325 8014891 YP_002977873.1 CDS Rleg_4093 NC_012850.1 4166834 4168264 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rec:RHECIAT_CH0004256 ammonium transporter protein; ammonium transporter complement(4166834..4168264) Rhizobium leguminosarum bv. trifolii WSM1325 8014892 YP_002977874.1 CDS Rleg_4094 NC_012850.1 4168292 4168642 R PFAM: nitrogen regulatory protein P-II; KEGG: rec:RHECIAT_CH0004257 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(4168292..4168642) Rhizobium leguminosarum bv. trifolii WSM1325 8014893 YP_002977875.1 CDS Rleg_4095 NC_012850.1 4168853 4169737 R TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: rec:RHECIAT_CH0004258 acyl-CoA thioesterase II protein; acyl-CoA thioesterase II complement(4168853..4169737) Rhizobium leguminosarum bv. trifolii WSM1325 8014894 YP_002977876.1 CDS Rleg_4096 NC_012850.1 4169821 4171035 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ret:RHE_CH03976 2-octaprenyl-6-methoxyphenyl hydroxylase; 2-octaprenyl-6-methoxyphenyl hydroxylase 4169821..4171035 Rhizobium leguminosarum bv. trifolii WSM1325 8014895 YP_002977877.1 CDS Rleg_4097 NC_012850.1 4171081 4171269 R PFAM: protein of unknown function DUF343; KEGG: rec:RHECIAT_CH0004260 hypothetical protein; hypothetical protein complement(4171081..4171269) Rhizobium leguminosarum bv. trifolii WSM1325 8014896 YP_002977878.1 CDS Rleg_4098 NC_012850.1 4171279 4171950 R PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: ret:RHE_CH03978 ATP-dependent protease La 2 protein; peptidase S16 lon domain-containing protein complement(4171279..4171950) Rhizobium leguminosarum bv. trifolii WSM1325 8014897 YP_002977879.1 CDS Rleg_4099 NC_012850.1 4172142 4173116 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ret:RHE_CH03979 thioredoxin protein; thioredoxin complement(4172142..4173116) Rhizobium leguminosarum bv. trifolii WSM1325 8014898 YP_002977880.1 CDS Rleg_4100 NC_012850.1 4173277 4173786 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rec:RHECIAT_CH0004263 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(4173277..4173786) Rhizobium leguminosarum bv. trifolii WSM1325 8015888 YP_002977881.1 CDS Rleg_4101 NC_012850.1 4174848 4176290 D PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: ret:RHE_CH04060 hypothetical protein; microcystin LR degradation protein MlrC-like protein 4174848..4176290 Rhizobium leguminosarum bv. trifolii WSM1325 8015889 YP_002977882.1 CDS Rleg_4102 NC_012850.1 4176501 4177232 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ansR; L-asparagine operon transcriptional regulator protein (repressor); GntR family transcriptional regulator 4176501..4177232 Rhizobium leguminosarum bv. trifolii WSM1325 8014900 YP_002977883.1 CDS Rleg_4103 NC_012850.1 4177324 4178832 D PFAM: extracellular solute-binding protein family 5; KEGG: dipeptide ABC transporter ; K02035 peptide/nickel transport system substrate-binding protein; family 5 extracellular solute-binding protein 4177324..4178832 Rhizobium leguminosarum bv. trifolii WSM1325 8014901 YP_002977884.1 CDS Rleg_4104 NC_012850.1 4178958 4179905 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: peptide ABC transporter ; K02033 peptide/nickel transport system permease protein; ABC transporter permease 4178958..4179905 Rhizobium leguminosarum bv. trifolii WSM1325 8014902 YP_002977885.1 CDS Rleg_4105 NC_012850.1 4179902 4180777 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppCf; dipeptide ABC transporter ; K02034 peptide/nickel transport system permease protein; ABC transporter permease 4179902..4180777 Rhizobium leguminosarum bv. trifolii WSM1325 8014903 YP_002977886.1 CDS Rleg_4106 NC_012850.1 4180799 4182583 D PFAM: gamma-glutamyltranspeptidase; KEGG: ggt; gamma-glutamyltransferase ; K00681 gamma-glutamyltranspeptidase; gamma-glutamyltransferase 4180799..4182583 Rhizobium leguminosarum bv. trifolii WSM1325 8014904 YP_002977887.1 CDS Rleg_4107 NC_012850.1 4182586 4183341 D PFAM: protein of unknown function DUF1028; KEGG: hypothetical protein; hypothetical protein 4182586..4183341 Rhizobium leguminosarum bv. trifolii WSM1325 8014905 YP_002977888.1 CDS Rleg_4108 NC_012850.1 4183365 4185203 D PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; KEGG: peptide ABC transporter ; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein; ABC transporter 4183365..4185203 Rhizobium leguminosarum bv. trifolii WSM1325 8014906 YP_002977889.1 CDS Rleg_4109 NC_012850.1 4185459 4186793 D KEGG: rec:RHECIAT_CH0004347 hypothetical protein; hypothetical protein 4185459..4186793 Rhizobium leguminosarum bv. trifolii WSM1325 8014907 YP_002977890.1 CDS Rleg_4110 NC_012850.1 4186919 4187956 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_CH04058 iron(III) ABC transporter, ATP-binding protein; ABC transporter complement(4186919..4187956) Rhizobium leguminosarum bv. trifolii WSM1325 8014908 YP_002977891.1 CDS Rleg_4111 NC_012850.1 4187953 4189533 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0004345 iron(III) ABC transporter, permease protein; ABC transporter permease complement(4187953..4189533) Rhizobium leguminosarum bv. trifolii WSM1325 8014909 YP_002977892.1 CDS Rleg_4112 NC_012850.1 4189770 4190786 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH04056 iron(III) ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(4189770..4190786) Rhizobium leguminosarum bv. trifolii WSM1325 8014910 YP_002977893.1 CDS Rleg_4113 NC_012850.1 4190999 4192537 R PFAM: aldehyde Dehydrogenase; KEGG: rec:RHECIAT_CH0004343 probable aldehyde dehydrogenase protein; aldehyde Dehydrogenase complement(4190999..4192537) Rhizobium leguminosarum bv. trifolii WSM1325 8014911 YP_002977894.1 CDS Rleg_4114 NC_012850.1 4192583 4193866 R PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_CH0004342 probable oxidoreductase protein; FAD dependent oxidoreductase complement(4192583..4193866) Rhizobium leguminosarum bv. trifolii WSM1325 8014912 YP_002977895.1 CDS Rleg_4115 NC_012850.1 4193935 4195347 R PFAM: protein of unknown function DUF1338; KEGG: rec:RHECIAT_CH0004341 hypothetical protein; hypothetical protein complement(4193935..4195347) Rhizobium leguminosarum bv. trifolii WSM1325 8014913 YP_002977896.1 CDS Rleg_4116 NC_012850.1 4195456 4196358 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0004340 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 4195456..4196358 Rhizobium leguminosarum bv. trifolii WSM1325 8014914 YP_002977897.1 CDS Rleg_4117 NC_012850.1 4196427 4196663 D PFAM: regulatory protein AsnC/Lrp family; KEGG: ret:RHE_CH04051 transcriptional regulator protein; AsnC family transcriptional regulator 4196427..4196663 Rhizobium leguminosarum bv. trifolii WSM1325 8014915 YP_002977898.1 CDS Rleg_4118 NC_012850.1 4196912 4198090 D PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH04050 cellobiosyl-diphosphoprenyl alpha-mannosyltransferase protein; group 1 glycosyl transferase 4196912..4198090 Rhizobium leguminosarum bv. trifolii WSM1325 8014916 YP_002977899.1 CDS Rleg_4119 NC_012850.1 4198215 4201526 R PFAM: polysaccharide biosynthesis protein; KEGG: rec:RHECIAT_CH0004337 teichuronic acid biosynthesis protein; polysaccharide biosynthesis protein complement(4198215..4201526) Rhizobium leguminosarum bv. trifolii WSM1325 8015890 YP_002977900.1 CDS Rleg_4120 NC_012850.1 4201615 4202793 R PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH04048 glycosyltransferase protein; group 1 glycosyl transferase complement(4201615..4202793) Rhizobium leguminosarum bv. trifolii WSM1325 8014917 YP_002977901.1 CDS Rleg_4121 NC_012850.1 4202839 4205319 R PFAM: glycoside hydrolase family 2 sugar binding; KEGG: ret:RHE_CH04047 beta-mannosidase protein; family 2 glycoside hydrolase complement(4202839..4205319) Rhizobium leguminosarum bv. trifolii WSM1325 8014918 YP_002977902.1 CDS Rleg_4122 NC_012850.1 4205336 4206310 R PFAM: Domain of unknown function DUF1839; KEGG: ret:RHE_CH04046 hypothetical protein; hypothetical protein complement(4205336..4206310) Rhizobium leguminosarum bv. trifolii WSM1325 8015891 YP_002977903.1 CDS Rleg_4123 NC_012850.1 4206319 4207227 R KEGG: rec:RHECIAT_CH0004334 serine--tRNA ligase protein; hypothetical protein complement(4206319..4207227) Rhizobium leguminosarum bv. trifolii WSM1325 8014919 YP_002977904.1 CDS Rleg_4124 NC_012850.1 4207233 4208414 R PFAM: acyl-CoA dehydrogenase; KEGG: rec:RHECIAT_CH0004333 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase complement(4207233..4208414) Rhizobium leguminosarum bv. trifolii WSM1325 8014920 YP_002977905.1 CDS Rleg_4125 NC_012850.1 4208414 4208665 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(4208414..4208665) Rhizobium leguminosarum bv. trifolii WSM1325 8014921 YP_002977906.1 CDS Rleg_4126 NC_012850.1 4208928 4209980 R KEGG: ret:RHE_CH04042 L-lysine 2,3-aminomutase protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(4208928..4209980) Rhizobium leguminosarum bv. trifolii WSM1325 8015892 YP_002977907.1 CDS Rleg_4127 NC_012850.1 4209977 4211038 R PFAM: tRNA synthetase class II (D K and N); KEGG: ret:RHE_CH04041 lysyl-tRNA synthetase protein; lysine--tRNA ligase complement(4209977..4211038) Rhizobium leguminosarum bv. trifolii WSM1325 8014922 YP_002977908.1 CDS Rleg_4128 NC_012850.1 4211188 4211757 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 4211188..4211757 Rhizobium leguminosarum bv. trifolii WSM1325 8014923 YP_002977909.1 CDS Rleg_4129 NC_012850.1 4211838 4212566 R PFAM: sugar isomerase (SIS); KEGG: ret:RHE_CH04038 hypothetical protein; hypothetical protein complement(4211838..4212566) Rhizobium leguminosarum bv. trifolii WSM1325 8014924 YP_002977910.1 CDS Rleg_4130 NC_012850.1 4212584 4213735 R KEGG: rec:RHECIAT_CH0004326 N-acetylglucosamine-6-phosphate deacetylase protein; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase complement(4212584..4213735) Rhizobium leguminosarum bv. trifolii WSM1325 8014925 YP_002977911.1 CDS Rleg_4131 NC_012850.1 4213735 4214766 R PFAM: sugar isomerase (SIS); KEGG: ret:RHE_CH04036 glucosamine--fructose-6-phosphate aminotransferase protein; glutamine--fructose-6-phosphate transaminase complement(4213735..4214766) Rhizobium leguminosarum bv. trifolii WSM1325 8014926 YP_002977912.1 CDS Rleg_4132 NC_012850.1 4214763 4215536 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0004324 probable transcriptional regulator protein; GntR family transcriptional regulator complement(4214763..4215536) Rhizobium leguminosarum bv. trifolii WSM1325 8014927 YP_002977913.1 CDS Rleg_4133 NC_012850.1 4215702 4216724 R PFAM: Aldose 1-epimerase; KEGG: rec:RHECIAT_CH0004323 aldose-1-epimerase protein; aldose 1-epimerase complement(4215702..4216724) Rhizobium leguminosarum bv. trifolii WSM1325 8014928 YP_002977914.1 CDS Rleg_4134 NC_012850.1 4216951 4217874 R catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase complement(4216951..4217874) Rhizobium leguminosarum bv. trifolii WSM1325 8014929 YP_002977915.1 CDS Rleg_4135 NC_012850.1 4218154 4220004 D PFAM: ABC transporter; ABC transporter; SbmABacA family protein; KEGG: ret:RHE_CH04032 ABC transporter permease/ATP-binding protein; ABC transporter 4218154..4220004 Rhizobium leguminosarum bv. trifolii WSM1325 8014930 YP_002977916.1 CDS Rleg_4136 NC_012850.1 4220076 4220705 R KEGG: hypothetical protein; hypothetical protein complement(4220076..4220705) Rhizobium leguminosarum bv. trifolii WSM1325 8014931 YP_002977917.1 CDS Rleg_4137 NC_012850.1 4220826 4222643 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004320 ABC transporter, ATP-binding protein; ABC transporter complement(4220826..4222643) Rhizobium leguminosarum bv. trifolii WSM1325 8014932 YP_002977918.1 CDS Rleg_4138 NC_012850.1 4222647 4223297 R TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: rec:RHECIAT_CH0004319 thiamine pyrophosphokinase protein; thiamine pyrophosphokinase complement(4222647..4223297) Rhizobium leguminosarum bv. trifolii WSM1325 8014933 YP_002977919.1 CDS Rleg_4139 NC_012850.1 4223361 4223888 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0004318 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator complement(4223361..4223888) Rhizobium leguminosarum bv. trifolii WSM1325 8015893 YP_002977920.1 CDS Rleg_4140 NC_012850.1 4224005 4225543 D PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH04028 transporter, permease protein; major facilitator superfamily protein 4224005..4225543 Rhizobium leguminosarum bv. trifolii WSM1325 8014934 YP_002977921.1 CDS Rleg_4141 NC_012850.1 4226031 4227479 D PFAM: peptidase M48 Ste24p; KEGG: rec:RHECIAT_CH0004316 metalloprotease protein; peptidase M48 Ste24p 4226031..4227479 Rhizobium leguminosarum bv. trifolii WSM1325 8014935 YP_002977922.1 CDS rpoH2 NC_012850.1 4227594 4228457 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 complement(4227594..4228457) Rhizobium leguminosarum bv. trifolii WSM1325 8014936 YP_002977923.1 CDS Rleg_4143 NC_012850.1 4228835 4229407 R PFAM: transcription factor CarD; KEGG: ret:RHE_CH04025 CarD family transcriptional regulator; SNP /replace=C; CarD family transcriptional regulator complement(4228835..4229407) Rhizobium leguminosarum bv. trifolii WSM1325 8014937 YP_002977924.1 CDS Rleg_4144 NC_012850.1 4229801 4230139 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rec:RHECIAT_CH0004312 ferredoxin III protein; 4Fe-4S ferredoxin complement(4229801..4230139) Rhizobium leguminosarum bv. trifolii WSM1325 8015894 YP_002977925.1 CDS Rleg_4145 NC_012850.1 4230334 4230738 R PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: rec:RHECIAT_CH0004311 heat shock protein (ribosome-associated); RNA-binding S4 domain-containing protein complement(4230334..4230738) Rhizobium leguminosarum bv. trifolii WSM1325 8014938 YP_002977926.1 CDS Rleg_4146 NC_012850.1 4230741 4233989 R PFAM: helicase domain protein; SMART: helicase domain protein; KEGG: rec:RHECIAT_CH0004310 ATP-dependent DNA helicase protein; helicase domain-containing protein complement(4230741..4233989) Rhizobium leguminosarum bv. trifolii WSM1325 8014939 YP_002977927.1 CDS Rleg_4147 NC_012850.1 4234800 4234955 D KEGG: pzu:PHZ_c2987 hypothetical protein; hypothetical protein 4234800..4234955 Rhizobium leguminosarum bv. trifolii WSM1325 8015895 YP_002977928.1 CDS Rleg_4148 NC_012850.1 4234983 4235240 D PFAM: 17 kDa surface antigen; KEGG: ret:RHE_CH04021 hypothetical protein; 17 kDa surface antigen 4234983..4235240 Rhizobium leguminosarum bv. trifolii WSM1325 8014940 YP_002977929.1 CDS Rleg_4149 NC_012850.1 4235830 4236555 R TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0004307 acetoacetyl-CoA reductase protein; acetoacetyl-CoA reductase complement(4235830..4236555) Rhizobium leguminosarum bv. trifolii WSM1325 8014941 YP_002977930.1 CDS Rleg_4150 NC_012850.1 4236627 4237808 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(4236627..4237808) Rhizobium leguminosarum bv. trifolii WSM1325 8014942 YP_002977931.1 CDS Rleg_4151 NC_012850.1 4238046 4238618 D TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein; KEGG: rec:RHECIAT_CH0004305 carbon flux regulator protein; polyhydroxyalkonate synthesis repressor PhaR 4238046..4238618 Rhizobium leguminosarum bv. trifolii WSM1325 8014943 YP_002977932.1 CDS Rleg_4152 NC_012850.1 4238613 4239020 R KEGG: rec:RHECIAT_CH0004304 hypothetical protein; hypothetical protein complement(4238613..4239020) Rhizobium leguminosarum bv. trifolii WSM1325 8014944 YP_002977933.1 CDS rpmF NC_012850.1 4239166 4239351 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(4239166..4239351) Rhizobium leguminosarum bv. trifolii WSM1325 8014945 YP_002977934.1 CDS Rleg_4154 NC_012850.1 4239507 4240154 R PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH04014 glutathione S-transferase protein; glutathione S-transferase domain protein complement(4239507..4240154) Rhizobium leguminosarum bv. trifolii WSM1325 8014946 YP_002977935.1 CDS Rleg_4155 NC_012850.1 4240168 4240890 R PFAM: Domain of unknown function DUF1868; KEGG: rec:RHECIAT_CH0004301 hypothetical protein; hypothetical protein complement(4240168..4240890) Rhizobium leguminosarum bv. trifolii WSM1325 8014947 YP_002977936.1 CDS mtgA NC_012850.1 4241037 4241702 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(4241037..4241702) Rhizobium leguminosarum bv. trifolii WSM1325 8014948 YP_002977937.1 CDS Rleg_4157 NC_012850.1 4241910 4242824 D PFAM: Polyprenyl synthetase; KEGG: rec:RHECIAT_CH0004299 geranyltranstransferase protein; polyprenyl synthetase 4241910..4242824 Rhizobium leguminosarum bv. trifolii WSM1325 8014949 YP_002977938.1 CDS Rleg_4158 NC_012850.1 4242834 4243895 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(4242834..4243895) Rhizobium leguminosarum bv. trifolii WSM1325 8014950 YP_002977939.1 CDS ispG NC_012850.1 4243912 4245162 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(4243912..4245162) Rhizobium leguminosarum bv. trifolii WSM1325 8014951 YP_002977940.1 CDS Rleg_4160 NC_012850.1 4245362 4246552 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH04008 transporter, permease protein; major facilitator superfamily protein complement(4245362..4246552) Rhizobium leguminosarum bv. trifolii WSM1325 8014952 YP_002977941.1 CDS Rleg_4161 NC_012850.1 4246616 4247377 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: rec:RHECIAT_CH0004295 probable transcriptional regulator protein, DeoR family; DeoR family transcriptional regulator complement(4246616..4247377) Rhizobium leguminosarum bv. trifolii WSM1325 8014953 YP_002977942.1 CDS Rleg_4162 NC_012850.1 4247524 4248474 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: multidrug ABC transporter; hypothetical protein 4247524..4248474 Rhizobium leguminosarum bv. trifolii WSM1325 8014954 YP_002977943.1 CDS Rleg_4163 NC_012850.1 4248626 4249399 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ret:RHE_CH04006 amino acid ABC transporter substrate-binding protein; family 3 extracellular solute-binding protein 4248626..4249399 Rhizobium leguminosarum bv. trifolii WSM1325 8014955 YP_002977944.1 CDS Rleg_4164 NC_012850.1 4249613 4250293 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH04005 amino acid ABC transporter permease; polar amino acid ABC transcriptional regulator inner membrane protein 4249613..4250293 Rhizobium leguminosarum bv. trifolii WSM1325 8014956 YP_002977945.1 CDS Rleg_4165 NC_012850.1 4250290 4251051 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004292 probable amino acid ABC transporter, ATP-binding protein; ABC transporter 4250290..4251051 Rhizobium leguminosarum bv. trifolii WSM1325 8014957 YP_002977946.1 CDS Rleg_4166 NC_012850.1 4251214 4251786 R PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_CH04003 reductase protein; NADPH-dependent FMN reductase complement(4251214..4251786) Rhizobium leguminosarum bv. trifolii WSM1325 8014958 YP_002977947.1 CDS Rleg_4167 NC_012850.1 4251977 4255441 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(4251977..4255441) Rhizobium leguminosarum bv. trifolii WSM1325 8015896 YP_002977948.1 CDS Rleg_4168 NC_012850.1 4255659 4256414 R PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ret:RHE_CH04001 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(4255659..4256414) Rhizobium leguminosarum bv. trifolii WSM1325 8014959 YP_002977949.1 CDS Rleg_4169 NC_012850.1 4256724 4258487 D responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABc transporter 4256724..4258487 Rhizobium leguminosarum bv. trifolii WSM1325 8014960 YP_002977950.1 CDS Rleg_4170 NC_012850.1 4258633 4259007 D KEGG: nwi:Nwi_3115 transposase; transposase 4258633..4259007 Rhizobium leguminosarum bv. trifolii WSM1325 8015897 YP_002977951.1 CDS Rleg_4171 NC_012850.1 4259475 4259828 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0004286 glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 4259475..4259828 Rhizobium leguminosarum bv. trifolii WSM1325 8014961 YP_002977952.1 CDS Rleg_4172 NC_012850.1 4259879 4261117 R KEGG: rec:RHECIAT_CH0004285 protein required for succinylation of osmoregulated periplasmic glucans; protein required for succinylation of osmoregulated periplasmic glucans complement(4259879..4261117) Rhizobium leguminosarum bv. trifolii WSM1325 8014962 YP_002977953.1 CDS Rleg_4173 NC_012850.1 4261218 4269737 R PFAM: glycosyltransferase 36; carbohydrate binding; glycosyltransferase 36 associated; KEGG: rec:RHECIAT_CH0004284 beta-1,2-glucan production associated transmembrane protein; glycosyltransferase complement(4261218..4269737) Rhizobium leguminosarum bv. trifolii WSM1325 8014963 YP_002977954.1 CDS Rleg_4174 NC_012850.1 4270312 4270476 R KEGG: rec:RHECIAT_CH0004283 hypothetical protein; hypothetical protein complement(4270312..4270476) Rhizobium leguminosarum bv. trifolii WSM1325 8014964 YP_002977955.1 CDS Rleg_4175 NC_012850.1 4270604 4270792 R KEGG: rec:RHECIAT_CH0004282 hypothetical protein; hypothetical protein complement(4270604..4270792) Rhizobium leguminosarum bv. trifolii WSM1325 8014965 YP_002977956.1 CDS Rleg_4176 NC_012850.1 4270956 4271705 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH03996 dipeptide ABC transporter, ATP-binding protein; ABC transporter complement(4270956..4271705) Rhizobium leguminosarum bv. trifolii WSM1325 8014966 YP_002977957.1 CDS Rleg_4177 NC_012850.1 4271702 4272535 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004280 dipeptide ABC transporter, ATP-binding protein; ABC transporter complement(4271702..4272535) Rhizobium leguminosarum bv. trifolii WSM1325 8014967 YP_002977958.1 CDS Rleg_4178 NC_012850.1 4272532 4273467 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0004279 dipeptide ABC transporter, permease protein; ABC transporter permease complement(4272532..4273467) Rhizobium leguminosarum bv. trifolii WSM1325 8014968 YP_002977959.1 CDS Rleg_4179 NC_012850.1 4273464 4274531 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH03993 dipeptide ABC transporter, permease protein; ABC transporter permease complement(4273464..4274531) Rhizobium leguminosarum bv. trifolii WSM1325 8014969 YP_002977960.1 CDS Rleg_4180 NC_012850.1 4274550 4276193 R PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_CH03992 dipeptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein complement(4274550..4276193) Rhizobium leguminosarum bv. trifolii WSM1325 8014970 YP_002977961.1 CDS Rleg_4181 NC_012850.1 4276231 4277289 R PFAM: peptidase M19 renal dipeptidase; KEGG: ret:RHE_CH03991 membrane dipeptidase protein; peptidase M19 complement(4276231..4277289) Rhizobium leguminosarum bv. trifolii WSM1325 8014971 YP_002977962.1 CDS Rleg_4182 NC_012850.1 4277436 4278461 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0004275 probable sugar ABC transporter, permease protein; inner-membrane translocator complement(4277436..4278461) Rhizobium leguminosarum bv. trifolii WSM1325 8014972 YP_002977963.1 CDS Rleg_4183 NC_012850.1 4278496 4280037 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004274 probable sugar ABC transporter, ATP-binding protein; ABC transporter complement(4278496..4280037) Rhizobium leguminosarum bv. trifolii WSM1325 8014973 YP_002977964.1 CDS Rleg_4184 NC_012850.1 4280106 4281035 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rec:RHECIAT_CH0004273 rhizopine ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(4280106..4281035) Rhizobium leguminosarum bv. trifolii WSM1325 8014974 YP_002977965.1 CDS Rleg_4185 NC_012850.1 4281411 4281908 D KEGG: rec:RHECIAT_CH0004272 hypothetical protein; hypothetical protein 4281411..4281908 Rhizobium leguminosarum bv. trifolii WSM1325 8014975 YP_002977966.1 CDS Rleg_4186 NC_012850.1 4282086 4283645 R PFAM: sulfatase; KEGG: ret:RHE_CH03986 sulfatase (sulfuric ester hydrolase) protein; sulfatase complement(4282086..4283645) Rhizobium leguminosarum bv. trifolii WSM1325 8014976 YP_002977967.1 CDS Rleg_4187 NC_012850.1 4283623 4284606 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH03985 UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase complement(4283623..4284606) Rhizobium leguminosarum bv. trifolii WSM1325 8015898 YP_002977968.1 CDS Rleg_4188 NC_012850.1 4284871 4285515 D KEGG: rec:RHECIAT_CH0004269 hypothetical protein; hypothetical protein 4284871..4285515 Rhizobium leguminosarum bv. trifolii WSM1325 8014977 YP_002977969.1 CDS Rleg_4189 NC_012850.1 4285672 4286241 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0004268 acetyltransferase protein; N-acetyltransferase GCN5 4285672..4286241 Rhizobium leguminosarum bv. trifolii WSM1325 8014978 YP_002977970.1 CDS Rleg_4190 NC_012850.1 4286275 4286529 R KEGG: rec:RHECIAT_CH0004267 hypothetical protein; hypothetical protein complement(4286275..4286529) Rhizobium leguminosarum bv. trifolii WSM1325 8015899 YP_002977971.1 CDS Rleg_4191 NC_012850.1 4286731 4288167 D KEGG: rec:RHECIAT_CH0004266 hypothetical protein; hypothetical protein 4286731..4288167 Rhizobium leguminosarum bv. trifolii WSM1325 8014979 YP_002977972.1 CDS Rleg_4192 NC_012850.1 4288202 4288762 D KEGG: rec:RHECIAT_CH0004265 hypothetical protein; hypothetical protein 4288202..4288762 Rhizobium leguminosarum bv. trifolii WSM1325 8014980 YP_002977973.1 CDS rplU NC_012850.1 4289363 4289680 D TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: rec:RHECIAT_CH0004351 50S ribosomal protein L21; 50S ribosomal protein L21 4289363..4289680 Rhizobium leguminosarum bv. trifolii WSM1325 8014982 YP_002977974.1 CDS rpmA NC_012850.1 4289714 4289983 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 4289714..4289983 Rhizobium leguminosarum bv. trifolii WSM1325 8014983 YP_002977975.1 CDS Rleg_4195 NC_012850.1 4290110 4290766 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0004353 acetyltransferase protein; N-acetyltransferase GCN5 4290110..4290766 Rhizobium leguminosarum bv. trifolii WSM1325 8014984 YP_002977976.1 CDS Rleg_4196 NC_012850.1 4290802 4291350 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0004354 acetyltransferase protein; N-acetyltransferase GCN5 4290802..4291350 Rhizobium leguminosarum bv. trifolii WSM1325 8014985 YP_002977977.1 CDS Rleg_4197 NC_012850.1 4291443 4292309 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: rec:RHECIAT_CH0004355 phosphatase protein; endonuclease/exonuclease/phosphatase complement(4291443..4292309) Rhizobium leguminosarum bv. trifolii WSM1325 8014986 YP_002977978.1 CDS obgE NC_012850.1 4292394 4293488 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 4292394..4293488 Rhizobium leguminosarum bv. trifolii WSM1325 8014987 YP_002977979.1 CDS Rleg_4199 NC_012850.1 4293475 4294644 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 4293475..4294644 Rhizobium leguminosarum bv. trifolii WSM1325 8014988 YP_002977980.1 CDS proA NC_012850.1 4294637 4295920 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 4294637..4295920 Rhizobium leguminosarum bv. trifolii WSM1325 8014989 YP_002977981.1 CDS nadD NC_012850.1 4295976 4296575 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 4295976..4296575 Rhizobium leguminosarum bv. trifolii WSM1325 8014990 YP_002977982.1 CDS Rleg_4202 NC_012850.1 4297098 4297889 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0004361 molybdenum ABC transporter, substrate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 4297098..4297889 Rhizobium leguminosarum bv. trifolii WSM1325 8014991 YP_002977983.1 CDS modB NC_012850.1 4298166 4298867 D part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 4298166..4298867 Rhizobium leguminosarum bv. trifolii WSM1325 8014992 YP_002977984.1 CDS Rleg_4204 NC_012850.1 4298864 4299931 D KEGG: ret:RHE_CH04073 molybdenum ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter ATPase; PFAM: ABC transporter; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 4298864..4299931 Rhizobium leguminosarum bv. trifolii WSM1325 8014993 YP_002977985.1 CDS Rleg_4205 NC_012850.1 4299932 4300309 R PFAM: regulatory protein LysR; KEGG: ret:RHE_CH04074 molybdenum-binding transcriptional regulator-repressor protein (molybdenum transport associatedprotein); ModE family transcriptional regulator complement(4299932..4300309) Rhizobium leguminosarum bv. trifolii WSM1325 8014994 YP_002977986.1 CDS Rleg_4206 NC_012850.1 4300514 4300963 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rec:RHECIAT_CH0004365 hypothetical protein; iojap family protein 4300514..4300963 Rhizobium leguminosarum bv. trifolii WSM1325 8015900 YP_002977987.1 CDS Rleg_4207 NC_012850.1 4301082 4301564 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 4301082..4301564 Rhizobium leguminosarum bv. trifolii WSM1325 8014995 YP_002977988.1 CDS Rleg_4208 NC_012850.1 4301753 4303156 D PFAM: peptidase M23; KEGG: rec:RHECIAT_CH0004367 metalloendopeptidase protein; peptidase M23 4301753..4303156 Rhizobium leguminosarum bv. trifolii WSM1325 8014996 YP_002977989.1 CDS Rleg_4209 NC_012850.1 4303146 4304468 D KEGG: rec:RHECIAT_CH0004368 C-terminal processing peptidase protein; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 4303146..4304468 Rhizobium leguminosarum bv. trifolii WSM1325 8015901 YP_002977990.1 CDS Rleg_4210 NC_012850.1 4304546 4305742 D PFAM: protein of unknown function DUF610 YibQ; KEGG: rec:RHECIAT_CH0004369 hypothetical protein; hypothetical protein 4304546..4305742 Rhizobium leguminosarum bv. trifolii WSM1325 8014997 YP_002977991.1 CDS Rleg_4211 NC_012850.1 4305780 4306313 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 4305780..4306313 Rhizobium leguminosarum bv. trifolii WSM1325 8014998 YP_002977992.1 CDS Rleg_4212 NC_012850.1 4306481 4306966 R TIGRFAM: bacterioferritin; PFAM: ferritin Dps family protein; KEGG: ret:RHE_CH04081 bacterioferritin protein; bacterioferritin complement(4306481..4306966) Rhizobium leguminosarum bv. trifolii WSM1325 8015902 YP_002977993.1 CDS Rleg_4213 NC_012850.1 4306932 4307360 R KEGG: rec:RHECIAT_CH0004372 hypothetical protein; hypothetical protein complement(4306932..4307360) Rhizobium leguminosarum bv. trifolii WSM1325 8014999 YP_002977994.1 CDS Rleg_4214 NC_012850.1 4307451 4310915 R KEGG: rec:RHECIAT_CH0004373 DNA polymerase III protein, alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(4307451..4310915) Rhizobium leguminosarum bv. trifolii WSM1325 8015000 YP_002977995.1 CDS Rleg_4216 NC_012850.1 4312368 4313312 R KEGG: ret:RHE_CH04085 hypothetical protein; hypothetical protein complement(4312368..4313312) Rhizobium leguminosarum bv. trifolii WSM1325 8015002 YP_002977996.1 CDS Rleg_4217 NC_012850.1 4313474 4313911 D PFAM: protein of unknown function DUF1025; KEGG: ret:RHE_CH04086 hypothetical protein; hypothetical protein 4313474..4313911 Rhizobium leguminosarum bv. trifolii WSM1325 8015003 YP_002977997.1 CDS Rleg_4218 NC_012850.1 4314016 4314222 R KEGG: ret:RHE_CH04087 hypothetical protein; hypothetical protein complement(4314016..4314222) Rhizobium leguminosarum bv. trifolii WSM1325 8015004 YP_002977998.1 CDS Rleg_4219 NC_012850.1 4314222 4315157 R PFAM: HpcH/HpaI aldolase; KEGG: rec:RHECIAT_CH0004378 citrate lyase protein, beta subunit; citrate (pro-3S)-lyase complement(4314222..4315157) Rhizobium leguminosarum bv. trifolii WSM1325 8015005 YP_002977999.1 CDS Rleg_4220 NC_012850.1 4315296 4315529 D KEGG: rec:RHECIAT_CH0004379 hypothetical protein; hypothetical protein 4315296..4315529 Rhizobium leguminosarum bv. trifolii WSM1325 8015006 YP_002978000.1 CDS Rleg_4221 NC_012850.1 4315642 4316064 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: rec:RHECIAT_CH0004380 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4315642..4316064 Rhizobium leguminosarum bv. trifolii WSM1325 8015007 YP_002978001.1 CDS leuD NC_012850.1 4316199 4316807 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 4316199..4316807 Rhizobium leguminosarum bv. trifolii WSM1325 8015008 YP_002978002.1 CDS Rleg_4223 NC_012850.1 4316868 4317800 R PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rec:RHECIAT_CH0004382 probable threonine ammonia-lyase protein; pyridoxal-5'-phosphate-dependent protein beta subunit complement(4316868..4317800) Rhizobium leguminosarum bv. trifolii WSM1325 8015009 YP_002978003.1 CDS Rleg_4224 NC_012850.1 4317966 4319078 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 4317966..4319078 Rhizobium leguminosarum bv. trifolii WSM1325 8015010 YP_002978004.1 CDS Rleg_4225 NC_012850.1 4319409 4320089 D PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ret:RHE_CH04094 phosphatase protein; PA-phosphatase like phosphoesterase 4319409..4320089 Rhizobium leguminosarum bv. trifolii WSM1325 8015011 YP_002978005.1 CDS Rleg_4226 NC_012850.1 4320206 4322092 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0004385 transporter, permease protein; general substrate transporter complement(4320206..4322092) Rhizobium leguminosarum bv. trifolii WSM1325 8015903 YP_002978006.1 CDS Rleg_4227 NC_012850.1 4322339 4323646 R PFAM: protein of unknown function DUF214; KEGG: rec:RHECIAT_CH0004386 hypothetical conserved membrane protein; hypothetical protein complement(4322339..4323646) Rhizobium leguminosarum bv. trifolii WSM1325 8015012 YP_002978007.1 CDS Rleg_4228 NC_012850.1 4323643 4324335 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0004387 ABC transporter, ATP-binding protein; ABC transporter complement(4323643..4324335) Rhizobium leguminosarum bv. trifolii WSM1325 8015013 YP_002978008.1 CDS Rleg_4229 NC_012850.1 4324342 4324809 R KEGG: ret:RHE_CH04098 hypothetical protein; hypothetical protein complement(4324342..4324809) Rhizobium leguminosarum bv. trifolii WSM1325 8015904 YP_002978009.1 CDS Rleg_4230 NC_012850.1 4324905 4326659 R PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; KEGG: ret:RHE_CH04099 alkaline phosphatase protein; alkaline phosphatase complement(4324905..4326659) Rhizobium leguminosarum bv. trifolii WSM1325 8015014 YP_002978010.1 CDS Rleg_4231 NC_012850.1 4326728 4326958 D hypothetical protein 4326728..4326958 Rhizobium leguminosarum bv. trifolii WSM1325 8015015 YP_002978011.1 CDS Rleg_4232 NC_012850.1 4327070 4328104 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 4327070..4328104 Rhizobium leguminosarum bv. trifolii WSM1325 8015905 YP_002978012.1 CDS Rleg_4233 NC_012850.1 4328331 4329203 D TIGRFAM: lytic murein transglycosylase; KEGG: rec:RHECIAT_CH0004392 membrane-bound lytic murein transglycosylase protein; lytic murein transglycosylase 4328331..4329203 Rhizobium leguminosarum bv. trifolii WSM1325 8015016 YP_002978013.1 CDS Rleg_4234 NC_012850.1 4329249 4330868 R KEGG: rec:RHECIAT_CH0004393 sensory box GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(4329249..4330868) Rhizobium leguminosarum bv. trifolii WSM1325 8015017 YP_002978014.1 CDS Rleg_4235 NC_012850.1 4330965 4331606 R PFAM: carbonic anhydrase; KEGG: rec:RHECIAT_CH0004394 carbonic anhydrase protein; carbonate dehydratase complement(4330965..4331606) Rhizobium leguminosarum bv. trifolii WSM1325 8015018 YP_002978015.1 CDS Rleg_4236 NC_012850.1 4331678 4332553 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase complement(4331678..4332553) Rhizobium leguminosarum bv. trifolii WSM1325 8015019 YP_002978016.1 CDS Rleg_4237 NC_012850.1 4332828 4337603 D PFAM: NAD-glutamate dehydrogenase; KEGG: ret:RHE_CH04105 NAD-specific glutamate dehydrogenase protein; NAD-glutamate dehydrogenase 4332828..4337603 Rhizobium leguminosarum bv. trifolii WSM1325 8015020 YP_002978017.1 CDS Rleg_4238 NC_012850.1 4337631 4339019 D PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH04106 hypothetical protein; major facilitator superfamily protein 4337631..4339019 Rhizobium leguminosarum bv. trifolii WSM1325 8015021 YP_002978018.1 CDS purH NC_012850.1 4339072 4340688 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(4339072..4340688) Rhizobium leguminosarum bv. trifolii WSM1325 8015022 YP_002978019.1 CDS Rleg_4240 NC_012850.1 4340753 4340887 R hypothetical protein complement(4340753..4340887) Rhizobium leguminosarum bv. trifolii WSM1325 8015023 YP_002978020.1 CDS Rleg_4241 NC_012850.1 4340894 4342540 R PFAM: Heparinase II/III family protein; KEGG: rec:RHECIAT_CH0004400 hypothetical protein; heparinase II/III family protein complement(4340894..4342540) Rhizobium leguminosarum bv. trifolii WSM1325 8015024 YP_002978021.1 CDS Rleg_4242 NC_012850.1 4342785 4344167 R PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: rec:RHECIAT_CH0004401 probable RNA methyltransferase - sun protein; Fmu (Sun) domain-containing protein complement(4342785..4344167) Rhizobium leguminosarum bv. trifolii WSM1325 8015025 YP_002978022.1 CDS Rleg_4243 NC_012850.1 4344164 4345126 R metalloprotease; heat shock protein HtpX complement(4344164..4345126) Rhizobium leguminosarum bv. trifolii WSM1325 8015026 YP_002978023.1 CDS Rleg_4244 NC_012850.1 4345237 4345461 D PFAM: protein of unknown function DUF1674; KEGG: rec:RHECIAT_CH0004403 hypothetical protein; hypothetical protein 4345237..4345461 Rhizobium leguminosarum bv. trifolii WSM1325 8015027 YP_002978024.1 CDS Rleg_4245 NC_012850.1 4345560 4347515 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(4345560..4347515) Rhizobium leguminosarum bv. trifolii WSM1325 8015028 YP_002978025.1 CDS Rleg_4246 NC_012850.1 4347747 4348451 D PFAM: protein of unknown function DUF1013; KEGG: rec:RHECIAT_CH0004405 hypothetical protein; hypothetical protein 4347747..4348451 Rhizobium leguminosarum bv. trifolii WSM1325 8015029 YP_002978026.1 CDS Rleg_4247 NC_012850.1 4348531 4349466 R PFAM: flagellin domain protein; KEGG: rec:RHECIAT_CH0004406 flagellin C protein; flagellin domain-containing protein complement(4348531..4349466) Rhizobium leguminosarum bv. trifolii WSM1325 8015030 YP_002978027.1 CDS Rleg_4248 NC_012850.1 4349724 4351634 R PFAM: AMP-dependent synthetase and ligase; KEGG: rec:RHECIAT_CH0004407 probable propionate-CoA ligase protein; AMP-dependent synthetase and ligase complement(4349724..4351634) Rhizobium leguminosarum bv. trifolii WSM1325 8015906 YP_002978028.1 CDS Rleg_4249 NC_012850.1 4351717 4352376 R PFAM: alanine racemase; KEGG: ret:RHE_CH04115 hypothetical protein; alanine racemase complement(4351717..4352376) Rhizobium leguminosarum bv. trifolii WSM1325 8015031 YP_002978029.1 CDS leuS NC_012850.1 4352577 4355207 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 4352577..4355207 Rhizobium leguminosarum bv. trifolii WSM1325 8015032 YP_002978030.1 CDS Rleg_4251 NC_012850.1 4355197 4355718 D KEGG: ret:RHE_CH04117 hypothetical protein; hypothetical protein 4355197..4355718 Rhizobium leguminosarum bv. trifolii WSM1325 8015033 YP_002978031.1 CDS holA NC_012850.1 4355729 4356769 D required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 4355729..4356769 Rhizobium leguminosarum bv. trifolii WSM1325 8015034 YP_002978032.1 CDS Rleg_4253 NC_012850.1 4356946 4357827 R KEGG: rec:RHECIAT_CH0004412 chromosome partitioning protein B; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein complement(4356946..4357827) Rhizobium leguminosarum bv. trifolii WSM1325 8015907 YP_002978033.1 CDS Rleg_4254 NC_012850.1 4357860 4358654 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ret:RHE_CH04120 chromosome partitioning protein A; Cobyrinic acid ac-diamide synthase complement(4357860..4358654) Rhizobium leguminosarum bv. trifolii WSM1325 8015908 YP_002978034.1 CDS gidB NC_012850.1 4358674 4359291 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(4358674..4359291) Rhizobium leguminosarum bv. trifolii WSM1325 8015035 YP_002978035.1 CDS Rleg_4256 NC_012850.1 4359317 4361194 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(4359317..4361194) Rhizobium leguminosarum bv. trifolii WSM1325 8015036 YP_002978036.1 CDS trmE NC_012850.1 4361269 4362582 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(4361269..4362582) Rhizobium leguminosarum bv. trifolii WSM1325 8015037 YP_002978037.1 CDS rho NC_012850.1 4362694 4363959 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(4362694..4363959) Rhizobium leguminosarum bv. trifolii WSM1325 8015038 YP_002978038.1 CDS Rleg_4259 NC_012850.1 4364157 4364693 R PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0004418 hypothetical protein; hypothetical protein complement(4364157..4364693) Rhizobium leguminosarum bv. trifolii WSM1325 8015039 YP_002978039.1 CDS hemE NC_012850.1 4364696 4365703 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(4364696..4365703) Rhizobium leguminosarum bv. trifolii WSM1325 8015040 YP_002978040.1 CDS Rleg_4261 NC_012850.1 4366129 4366950 D PFAM: protein of unknown function DUF299; KEGG: rec:RHECIAT_CH0000002 hypothetical protein; hypothetical protein 4366129..4366950 Rhizobium leguminosarum bv. trifolii WSM1325 8015041 YP_002978041.1 CDS Rleg_4262 NC_012850.1 4366984 4367583 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 4366984..4367583 Rhizobium leguminosarum bv. trifolii WSM1325 8015042 YP_002978042.1 CDS aroE NC_012850.1 4367576 4368433 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 4367576..4368433 Rhizobium leguminosarum bv. trifolii WSM1325 8015043 YP_002978043.1 CDS coaE NC_012850.1 4368433 4369044 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 4368433..4369044 Rhizobium leguminosarum bv. trifolii WSM1325 8015044 YP_002978044.1 CDS Rleg_4265 NC_012850.1 4369037 4369759 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 4369037..4369759 Rhizobium leguminosarum bv. trifolii WSM1325 8015045 YP_002978045.1 CDS Rleg_4266 NC_012850.1 4369827 4370309 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(4369827..4370309) Rhizobium leguminosarum bv. trifolii WSM1325 8015046 YP_002978046.1 CDS fxsA NC_012850.1 4370411 4370926 R F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein complement(4370411..4370926) Rhizobium leguminosarum bv. trifolii WSM1325 8015047 YP_002978047.1 CDS Rleg_4268 NC_012850.1 4371050 4371754 D PFAM: import inner membrane translocase subunit Tim44; KEGG: ret:RHE_CH00008 translocase transmembrane protein; import inner membrane translocase subunit Tim44 4371050..4371754 Rhizobium leguminosarum bv. trifolii WSM1325 8015048 YP_002978048.1 CDS Rleg_4269 NC_012850.1 4371747 4372865 D PFAM: MltA domain protein; 3D domain protein; KEGG: rec:RHECIAT_CH0000010 membrane-bound lytic murein transglycosylase protein; MltA domain-containing protein 4371747..4372865 Rhizobium leguminosarum bv. trifolii WSM1325 8015049 YP_002978049.1 CDS Rleg_4270 NC_012850.1 4372865 4373431 D PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: rec:RHECIAT_CH0000011 DNA repair protein, Smr/MutS family; Smr protein/MutS2 4372865..4373431 Rhizobium leguminosarum bv. trifolii WSM1325 8015050 YP_002978050.1 CDS Rleg_4271 NC_012850.1 4373428 4373805 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0000012 transcriptional regulator protein; XRE family transcriptional regulator 4373428..4373805 Rhizobium leguminosarum bv. trifolii WSM1325 8015051 YP_002978051.1 CDS gyrB NC_012850.1 4373941 4376376 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4373941..4376376 Rhizobium leguminosarum bv. trifolii WSM1325 8015052 YP_002978052.1 CDS Rleg_4273 NC_012850.1 4376462 4377061 R PFAM: nitroreductase; KEGG: rec:RHECIAT_CH0000014 probable oxidoreductase protein; nitroreductase complement(4376462..4377061) Rhizobium leguminosarum bv. trifolii WSM1325 8015909 YP_002978053.1 CDS Rleg_4274 NC_012850.1 4377105 4377389 R KEGG: rec:RHECIAT_CH0000015 hypothetical protein; hypothetical protein complement(4377105..4377389) Rhizobium leguminosarum bv. trifolii WSM1325 8015910 YP_002978054.1 CDS Rleg_4275 NC_012850.1 4377554 4378520 D KEGG: rec:RHECIAT_CH0000016 glutathione-S-transferase protein; glutathione S-transferase-like protein join(4377554..4378051,4378053..4378520) Rhizobium leguminosarum bv. trifolii WSM1325 8015053 YP_002978055.1 CDS Rleg_4276 NC_012850.1 4378665 4379507 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rec:RHECIAT_CH0000017 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4378665..4379507 Rhizobium leguminosarum bv. trifolii WSM1325 8015054 YP_002978056.1 CDS Rleg_4277 NC_012850.1 4379712 4380989 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: ret:RHE_CH00017 intracellular PHB depolymerase protein; polyhydroxyalkanoate depolymerase 4379712..4380989 Rhizobium leguminosarum bv. trifolii WSM1325 8015055 YP_002978057.1 CDS Rleg_4278 NC_012850.1 4381135 4381569 D KEGG: ret:RHE_CH00018 hypothetical protein; hypothetical protein 4381135..4381569 Rhizobium leguminosarum bv. trifolii WSM1325 8015056 YP_002978058.1 CDS Rleg_4279 NC_012850.1 4381677 4382435 D PFAM: protein of unknown function DUF45; KEGG: ret:RHE_CH00019 zinc metallopeptidase protein; hypothetical protein 4381677..4382435 Rhizobium leguminosarum bv. trifolii WSM1325 8015057 YP_002978059.1 CDS Rleg_4280 NC_012850.1 4382614 4383282 D catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 4382614..4383282 Rhizobium leguminosarum bv. trifolii WSM1325 8015058 YP_002978060.1 CDS Rleg_4281 NC_012850.1 4383285 4384505 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 4383285..4384505 Rhizobium leguminosarum bv. trifolii WSM1325 8015059 YP_002978061.1 CDS trpA NC_012850.1 4384509 4385348 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 4384509..4385348 Rhizobium leguminosarum bv. trifolii WSM1325 8015060 YP_002978062.1 CDS Rleg_4283 NC_012850.1 4385478 4386383 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 4385478..4386383 Rhizobium leguminosarum bv. trifolii WSM1325 8015061 YP_002978063.1 CDS Rleg_4284 NC_012850.1 4386435 4387763 D KEGG: rec:RHECIAT_CH0000025 FolC; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 4386435..4387763 Rhizobium leguminosarum bv. trifolii WSM1325 8015062 YP_002978064.1 CDS Rleg_4285 NC_012850.1 4387834 4388154 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rec:RHECIAT_CH0000026 thioredoxin protein; thioredoxin complement(4387834..4388154) Rhizobium leguminosarum bv. trifolii WSM1325 8015063 YP_002978065.1 CDS Rleg_4286 NC_012850.1 4388230 4391781 R TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: ret:RHE_CH00026 nuclease/helicase protein, ATP dependent; double-strand break repair helicase AddA complement(4388230..4391781) Rhizobium leguminosarum bv. trifolii WSM1325 8015064 YP_002978066.1 CDS Rleg_4287 NC_012850.1 4391774 4394968 R TIGRFAM: double-strand break repair protein AddB; KEGG: ret:RHE_CH00027 hypothetical protein; double-strand break repair protein AddB complement(4391774..4394968) Rhizobium leguminosarum bv. trifolii WSM1325 8015065 YP_002978067.1 CDS Rleg_4288 NC_012850.1 4394972 4395703 R PFAM: nucleotidyl transferase; KEGG: ret:RHE_CH00028 nucleotidyltransferase protein; nucleotidyl transferase complement(4394972..4395703) Rhizobium leguminosarum bv. trifolii WSM1325 8015066 YP_002978068.1 CDS Rleg_4289 NC_012850.1 4395717 4397234 R PFAM: protein of unknown function UPF0079; aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: rec:RHECIAT_CH0000030 hypothetical protein; hypothetical protein complement(4395717..4397234) Rhizobium leguminosarum bv. trifolii WSM1325 8015067 YP_002978069.1 CDS Rleg_4290 NC_012850.1 4397231 4399816 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: rec:RHECIAT_CH0000031 probable two-component sensor histidine kinase protein; PAS/PAC sensor signal transduction histidine kinase complement(4397231..4399816) Rhizobium leguminosarum bv. trifolii WSM1325 8015068 YP_002978070.1 CDS Rleg_4291 NC_012850.1 4400020 4401420 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(4400020..4401420) Rhizobium leguminosarum bv. trifolii WSM1325 8015069 YP_002978071.1 CDS Rleg_4292 NC_012850.1 4401577 4401852 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: rec:RHECIAT_CH0000033 phosphocarrier protein HPr protein; phosphotransferase system, phosphocarrier protein HPr complement(4401577..4401852) Rhizobium leguminosarum bv. trifolii WSM1325 8015070 YP_002978072.1 CDS Rleg_4293 NC_012850.1 4401862 4402263 R PFAM: PTS system fructose subfamily IIA component; KEGG: rec:RHECIAT_CH0000034 probable protein-N(pi)-phosphohistidine-sugar phosphotransferase protein (enzyme II of the phosphotransferase system); PTS system fructose subfamily transporter subunit IIA complement(4401862..4402263) Rhizobium leguminosarum bv. trifolii WSM1325 8015911 YP_002978073.1 CDS Rleg_4294 NC_012850.1 4402413 4402865 R KEGG: rec:RHECIAT_CH0000035 hypothetical protein; HPr kinase complement(4402413..4402865) Rhizobium leguminosarum bv. trifolii WSM1325 8015912 YP_002978074.1 CDS Rleg_4295 NC_012850.1 4402862 4404652 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: ret:RHE_CH00035 two-component sensor histidine kinase protein; histidine kinase complement(4402862..4404652) Rhizobium leguminosarum bv. trifolii WSM1325 8015071 YP_002978075.1 CDS Rleg_4296 NC_012850.1 4404838 4405590 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0000037 two-component response regulator protein; transcriptional regulator complement(4404838..4405590) Rhizobium leguminosarum bv. trifolii WSM1325 8015072 YP_002978076.1 CDS Rleg_4297 NC_012850.1 4405909 4407519 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 4405909..4407519 Rhizobium leguminosarum bv. trifolii WSM1325 8015073 YP_002978077.1 CDS Rleg_4298 NC_012850.1 4407628 4408071 D PFAM: Class I peptide chain release factor; KEGG: ret:RHE_CH00038 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 4407628..4408071 Rhizobium leguminosarum bv. trifolii WSM1325 8015074 YP_002978078.1 CDS Rleg_4299 NC_012850.1 4408073 4408651 D PFAM: 2OG-Fe(II) oxygenase; KEGG: rec:RHECIAT_CH0000041 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 4408073..4408651 Rhizobium leguminosarum bv. trifolii WSM1325 8015075 YP_002978079.1 CDS Rleg_4300 NC_012850.1 4408658 4409653 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(4408658..4409653) Rhizobium leguminosarum bv. trifolii WSM1325 8015076 YP_002978080.1 CDS hisE NC_012850.1 4409650 4409973 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(4409650..4409973) Rhizobium leguminosarum bv. trifolii WSM1325 8015077 YP_002978081.1 CDS Rleg_4302 NC_012850.1 4409991 4410779 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(4409991..4410779) Rhizobium leguminosarum bv. trifolii WSM1325 8015078 YP_002978082.1 CDS Rleg_4303 NC_012850.1 4410780 4411526 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(4410780..4411526) Rhizobium leguminosarum bv. trifolii WSM1325 8015079 YP_002978083.1 CDS Rleg_4304 NC_012850.1 4411533 4412090 R KEGG: rec:RHECIAT_CH0000046 hypothetical protein; hypothetical protein complement(4411533..4412090) Rhizobium leguminosarum bv. trifolii WSM1325 8015080 YP_002978084.1 CDS Rleg_4305 NC_012850.1 4412087 4412269 R KEGG: rec:RHECIAT_CH0000047 hypothetical protein; hypothetical protein complement(4412087..4412269) Rhizobium leguminosarum bv. trifolii WSM1325 8015081 YP_002978085.1 CDS hisH NC_012850.1 4412397 4413047 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(4412397..4413047) Rhizobium leguminosarum bv. trifolii WSM1325 8015082 YP_002978086.1 CDS Rleg_4307 NC_012850.1 4413050 4413535 R KEGG: ret:RHE_CH00046 hypothetical protein; hypothetical protein complement(4413050..4413535) Rhizobium leguminosarum bv. trifolii WSM1325 8015913 YP_002978087.1 CDS hisB NC_012850.1 4413558 4414166 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(4413558..4414166) Rhizobium leguminosarum bv. trifolii WSM1325 8015083 YP_002978088.1 CDS Rleg_4309 NC_012850.1 4414323 4414850 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 4414323..4414850 Rhizobium leguminosarum bv. trifolii WSM1325 8015084 YP_002978089.1 CDS Rleg_4310 NC_012850.1 4414837 4415349 D PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll5006 aminoglycoside 6'-N-acetyltransferase; N-acetyltransferase GCN5 4414837..4415349 Rhizobium leguminosarum bv. trifolii WSM1325 8015085 YP_002978090.1 CDS hslU NC_012850.1 4415346 4416653 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 4415346..4416653 Rhizobium leguminosarum bv. trifolii WSM1325 8015086 YP_002978091.1 CDS Rleg_4312 NC_012850.1 4416865 4417788 D PFAM: protein of unknown function DUF1402; KEGG: rec:RHECIAT_CH0000053 hypothetical protein; hypothetical protein 4416865..4417788 Rhizobium leguminosarum bv. trifolii WSM1325 8015087 YP_002978092.1 CDS Rleg_4313 NC_012850.1 4417837 4419249 D PFAM: cytochrome P450; KEGG: rec:RHECIAT_CH0000054 probable cytochrome P450 protein; cytochrome P450 4417837..4419249 Rhizobium leguminosarum bv. trifolii WSM1325 8015088 YP_002978093.1 CDS Rleg_4314 NC_012850.1 4419336 4421507 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 4419336..4421507 Rhizobium leguminosarum bv. trifolii WSM1325 8015089 YP_002978094.1 CDS Rleg_4315 NC_012850.1 4421585 4422268 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0000056 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(4421585..4422268) Rhizobium leguminosarum bv. trifolii WSM1325 8015090 YP_002978095.1 CDS Rleg_4316 NC_012850.1 4422448 4422942 D PFAM: protein of unknown function DUF1052; KEGG: rec:RHECIAT_CH0000057 hypothetical protein; hypothetical protein 4422448..4422942 Rhizobium leguminosarum bv. trifolii WSM1325 8015091 YP_002978096.1 CDS Rleg_4317 NC_012850.1 4422966 4423544 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0000058 two-component response regulator protein; response regulator receiver protein complement(4422966..4423544) Rhizobium leguminosarum bv. trifolii WSM1325 8015092 YP_002978097.1 CDS Rleg_4318 NC_012850.1 4423612 4424940 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH00056 two-component sensor histidine kinase protein; histidine kinase complement(4423612..4424940) Rhizobium leguminosarum bv. trifolii WSM1325 8015093 YP_002978098.1 CDS Rleg_4319 NC_012850.1 4424964 4427429 R KEGG: rec:RHECIAT_CH0000060 ATP-dependent helicase protein; TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent helicase HrpB complement(4424964..4427429) Rhizobium leguminosarum bv. trifolii WSM1325 8015094 YP_002978099.1 CDS Rleg_4320 NC_012850.1 4427426 4428373 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(4427426..4428373) Rhizobium leguminosarum bv. trifolii WSM1325 8015095 YP_002978100.1 CDS Rleg_4321 NC_012850.1 4435599 4438979 R KEGG: rec:RHECIAT_CH0000069 hypothetical protein; hypothetical protein complement(4435599..4438979) Rhizobium leguminosarum bv. trifolii WSM1325 8015101 YP_002978101.1 CDS Rleg_4322 NC_012850.1 4439113 4440765 R SMART: tetratricopeptide domain protein; KEGG: atc:AGR_L_3032 hypothetical protein; hypothetical protein complement(4439113..4440765) Rhizobium leguminosarum bv. trifolii WSM1325 8015102 YP_002978102.1 CDS Rleg_4323 NC_012850.1 4441036 4441527 R KEGG: atc:AGR_L_2996 hypothetical protein; hypothetical protein complement(4441036..4441527) Rhizobium leguminosarum bv. trifolii WSM1325 8015103 YP_002978103.1 CDS Rleg_4324 NC_012850.1 4441647 4442996 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: atc:AGR_L_2998 alkaline proteinase secretion protein; SNP /replace=G; HlyD family type I secretion membrane fusion protein complement(4441647..4442996) Rhizobium leguminosarum bv. trifolii WSM1325 8015104 YP_002978104.1 CDS Rleg_4325 NC_012850.1 4443002 4445296 R KEGG: atc:AGR_L_3000 ABC protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; SMART: AAA ATPase; type I secretion system ATPase complement(4443002..4445296) Rhizobium leguminosarum bv. trifolii WSM1325 8015105 YP_002978105.1 CDS Rleg_4326 NC_012850.1 4445322 4447349 R KEGG: atc:AGR_L_3002 hypothetical protein; hypothetical protein complement(4445322..4447349) Rhizobium leguminosarum bv. trifolii WSM1325 8015106 YP_002978106.1 CDS Rleg_4327 NC_012850.1 4447492 4448448 R KEGG: atc:AGR_L_3004 hypothetical protein; hypothetical protein complement(4447492..4448448) Rhizobium leguminosarum bv. trifolii WSM1325 8015107 YP_002978107.1 CDS Rleg_4328 NC_012850.1 4449291 4450073 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: ret:RHE_CH00066 LuxR family transcriptional regulator; LuxR family transcriptional regulator 4449291..4450073 Rhizobium leguminosarum bv. trifolii WSM1325 8015108 YP_002978108.1 CDS Rleg_4329 NC_012850.1 4450093 4450413 R KEGG: rec:RHECIAT_CH0000071 hypothetical protein; hypothetical protein complement(4450093..4450413) Rhizobium leguminosarum bv. trifolii WSM1325 8015109 YP_002978109.1 CDS Rleg_4330 NC_012850.1 4450806 4451828 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH00068 dTDP-glucose 4,6-dehydratase protein; SNP /replace=A; NAD-dependent epimerase/dehydratase 4450806..4451828 Rhizobium leguminosarum bv. trifolii WSM1325 8015110 YP_002978110.1 CDS Rleg_4331 NC_012850.1 4451830 4452813 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_CH0000073 UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase 4451830..4452813 Rhizobium leguminosarum bv. trifolii WSM1325 8015111 YP_002978111.1 CDS Rleg_4332 NC_012850.1 4452810 4454678 D KEGG: rec:RHECIAT_CH0000074 probable cellulose synthase protein; cellulose synthase protein 4452810..4454678 Rhizobium leguminosarum bv. trifolii WSM1325 8015112 YP_002978112.1 CDS Rleg_4333 NC_012850.1 4454717 4455238 D PFAM: protein of unknown function DUF995; KEGG: ret:RHE_CH00071 hypothetical protein; hypothetical protein 4454717..4455238 Rhizobium leguminosarum bv. trifolii WSM1325 8015113 YP_002978113.1 CDS Rleg_4334 NC_012850.1 4455242 4456210 D KEGG: rec:RHECIAT_CH0000076 polysaccharide degradation protein; polysaccharide degradation protein 4455242..4456210 Rhizobium leguminosarum bv. trifolii WSM1325 8015915 YP_002978114.1 CDS Rleg_4335 NC_012850.1 4456289 4457575 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0000077 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(4456289..4457575) Rhizobium leguminosarum bv. trifolii WSM1325 8015114 YP_002978115.1 CDS Rleg_4336 NC_012850.1 4457721 4458740 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_CH00074 LacI family transcription regulator; LacI family transcriptional regulator 4457721..4458740 Rhizobium leguminosarum bv. trifolii WSM1325 8015115 YP_002978116.1 CDS Rleg_4337 NC_012850.1 4458869 4460725 D KEGG: rec:RHECIAT_CH0000079 hypothetical protein; hypothetical protein 4458869..4460725 Rhizobium leguminosarum bv. trifolii WSM1325 8015916 YP_002978117.1 CDS Rleg_4338 NC_012850.1 4460722 4461732 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ret:RHE_CH00076 D-2-hydroxyacid dehydrogenase protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 4460722..4461732 Rhizobium leguminosarum bv. trifolii WSM1325 8015116 YP_002978118.1 CDS Rleg_4339 NC_012850.1 4461754 4463031 R PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0000081 oxidoreducatse protein; oxidoreductase domain-containing protein complement(4461754..4463031) Rhizobium leguminosarum bv. trifolii WSM1325 8015917 YP_002978119.1 CDS Rleg_4340 NC_012850.1 4463073 4463903 R PFAM: xylose isomerase; KEGG: ret:RHE_CH00078 endonuclease protein; xylose isomerase complement(4463073..4463903) Rhizobium leguminosarum bv. trifolii WSM1325 8015117 YP_002978120.1 CDS Rleg_4341 NC_012850.1 4464041 4465204 R PFAM: protein of unknown function DUF993; KEGG: ret:RHE_CH00079 hypothetical protein; hypothetical protein complement(4464041..4465204) Rhizobium leguminosarum bv. trifolii WSM1325 8015118 YP_002978121.1 CDS Rleg_4342 NC_012850.1 4465208 4466356 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0000084 oxidoreductase protein; oxidoreductase domain-containing protein complement(4465208..4466356) Rhizobium leguminosarum bv. trifolii WSM1325 8015918 YP_002978122.1 CDS Rleg_4343 NC_012850.1 4466701 4467378 R PFAM: regulatory protein TetR; KEGG: ret:RHE_CH00081 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4466701..4467378) Rhizobium leguminosarum bv. trifolii WSM1325 8015119 YP_002978123.1 CDS Rleg_4344 NC_012850.1 4467578 4468864 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH00082 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 4467578..4468864 Rhizobium leguminosarum bv. trifolii WSM1325 8015120 YP_002978124.1 CDS Rleg_4345 NC_012850.1 4468871 4469830 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000087 probable sugar ABC transporter, permease protein; ABC transporter permease 4468871..4469830 Rhizobium leguminosarum bv. trifolii WSM1325 8015919 YP_002978125.1 CDS Rleg_4346 NC_012850.1 4469832 4470710 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000088 probable sugar ABC transporter, permease protein; ABC transporter permease 4469832..4470710 Rhizobium leguminosarum bv. trifolii WSM1325 8015121 YP_002978126.1 CDS Rleg_4347 NC_012850.1 4470734 4471807 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH00085 oxidoreductase protein; oxidoreductase domain-containing protein 4470734..4471807 Rhizobium leguminosarum bv. trifolii WSM1325 8015122 YP_002978127.1 CDS Rleg_4348 NC_012850.1 4471840 4472916 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_CH00086 sugar ABC transporter, ATP binding protein; ABC transporter 4471840..4472916 Rhizobium leguminosarum bv. trifolii WSM1325 8015123 YP_002978128.1 CDS Rleg_4349 NC_012850.1 4472985 4473860 D PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: ret:RHE_CH00087 choline kinase protein; choline/ethanolamine kinase 4472985..4473860 Rhizobium leguminosarum bv. trifolii WSM1325 8015124 YP_002978129.1 CDS Rleg_4350 NC_012850.1 4473861 4476311 D PFAM: FAD dependent oxidoreductase; Glycine cleavage T-protein barrel; Sarcosine oxidase gamma subunit; glycine cleavage T protein (aminomethyl transferase); KEGG: rec:RHECIAT_CH0000092 probable sarcosine dehydrogenase protein; FAD dependent oxidoreductase 4473861..4476311 Rhizobium leguminosarum bv. trifolii WSM1325 8015125 YP_002978130.1 CDS Rleg_4351 NC_012850.1 4476628 4477836 D PFAM: Integrase catalytic region; KEGG: hne:HNE_3190 ISHne2, transposase; integrase catalytic subunit 4476628..4477836 Rhizobium leguminosarum bv. trifolii WSM1325 8015126 YP_002978131.1 CDS Rleg_4352 NC_012850.1 4478016 4479470 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: rec:RHECIAT_CH0000093 D-mannonate oxidoreductase protein; mannitol dehydrogenase domain-containing protein complement(4478016..4479470) Rhizobium leguminosarum bv. trifolii WSM1325 8015127 YP_002978132.1 CDS Rleg_4353 NC_012850.1 4479467 4480882 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(4479467..4480882) Rhizobium leguminosarum bv. trifolii WSM1325 8015128 YP_002978133.1 CDS Rleg_4354 NC_012850.1 4481062 4481271 D PFAM: SlyX family protein; KEGG: rec:RHECIAT_CH0000095 hypothetical protein; hypothetical protein 4481062..4481271 Rhizobium leguminosarum bv. trifolii WSM1325 8015129 YP_002978134.1 CDS Rleg_4355 NC_012850.1 4481318 4482799 R KEGG: rec:RHECIAT_CH0000096 succinate-semialdehyde dehydrogenase (NAD(P)(+)) protein; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase complement(4481318..4482799) Rhizobium leguminosarum bv. trifolii WSM1325 8015130 YP_002978135.1 CDS Rleg_4356 NC_012850.1 4482967 4484247 R catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase complement(4482967..4484247) Rhizobium leguminosarum bv. trifolii WSM1325 8015131 YP_002978136.1 CDS Rleg_4357 NC_012850.1 4484416 4485225 D PFAM: Cupin 2 conserved barrel domain protein; regulatory protein MerR; helix-turn-helix domain protein; SMART: regulatory protein MerR; helix-turn-helix domain protein; KEGG: ret:RHE_CH00094 MerR family transcriptional regulator; MerR family transcriptional regulator 4484416..4485225 Rhizobium leguminosarum bv. trifolii WSM1325 8015132 YP_002978137.1 CDS Rleg_4358 NC_012850.1 4485434 4486060 D PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; KEGG: ret:RHE_CH00095 RNAse D protein; 3'-5' exonuclease 4485434..4486060 Rhizobium leguminosarum bv. trifolii WSM1325 8015133 YP_002978138.1 CDS Rleg_4359 NC_012850.1 4486291 4487850 D KEGG: rec:RHECIAT_CH0000100 hypothetical protein; hypothetical protein 4486291..4487850 Rhizobium leguminosarum bv. trifolii WSM1325 8015920 YP_002978139.1 CDS rpsA NC_012850.1 4487927 4489630 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(4487927..4489630) Rhizobium leguminosarum bv. trifolii WSM1325 8015134 YP_002978140.1 CDS cmk NC_012850.1 4489807 4490454 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(4489807..4490454) Rhizobium leguminosarum bv. trifolii WSM1325 8015135 YP_002978141.1 CDS Rleg_4362 NC_012850.1 4490524 4491882 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(4490524..4491882) Rhizobium leguminosarum bv. trifolii WSM1325 8015921 YP_002978142.1 CDS Rleg_4363 NC_012850.1 4492159 4492542 D KEGG: ret:RHE_CH00099 hypothetical protein; hypothetical protein 4492159..4492542 Rhizobium leguminosarum bv. trifolii WSM1325 8015136 YP_002978143.1 CDS Rleg_4364 NC_012850.1 4492887 4493096 D KEGG: rec:RHECIAT_CH0000105 excinuclease ABC protein, C subunit; excinuclease ABC subunit C 4492887..4493096 Rhizobium leguminosarum bv. trifolii WSM1325 8015138 YP_002978144.1 CDS Rleg_4366 NC_012850.1 4493783 4494712 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: ret:RHE_PE00352 taurine dioxygenase protein; taurine dioxygenase 4493783..4494712 Rhizobium leguminosarum bv. trifolii WSM1325 8015140 YP_002978145.1 CDS Rleg_4367 NC_012850.1 4494958 4495992 D PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: alcohol dehydrogenase protein ; K07119; alcohol dehydrogenase zinc-binding domain-containing protein 4494958..4495992 Rhizobium leguminosarum bv. trifolii WSM1325 8015141 YP_002978146.1 CDS Rleg_4368 NC_012850.1 4496148 4497101 D KEGG: azc:AZC_3160 ABC transporter substrate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 4496148..4497101 Rhizobium leguminosarum bv. trifolii WSM1325 8015142 YP_002978147.1 CDS Rleg_4369 NC_012850.1 4497662 4499038 R KEGG: rec:RHECIAT_PA0000023 hypothetical protein; hypothetical protein complement(4497662..4499038) Rhizobium leguminosarum bv. trifolii WSM1325 8015143 YP_002978148.1 CDS Rleg_4370 NC_012850.1 4499411 4500259 D KEGG: cysE; serine O-acetyltransferase ; K00640 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein; transferase hexapeptide repeat containing protein; serine O-acetyltransferase 4499411..4500259 Rhizobium leguminosarum bv. trifolii WSM1325 8015144 YP_002978149.1 CDS Rleg_4371 NC_012850.1 4500371 4500607 R KEGG: ret:RHE_CH00101 hypothetical protein; hypothetical protein complement(4500371..4500607) Rhizobium leguminosarum bv. trifolii WSM1325 8015145 YP_002978150.1 CDS Rleg_4372 NC_012850.1 4500845 4501567 D PFAM: protein of unknown function DUF1275; KEGG: ret:RHE_CH00102 hypothetical protein; hypothetical protein 4500845..4501567 Rhizobium leguminosarum bv. trifolii WSM1325 8015146 YP_002978151.1 CDS Rleg_4373 NC_012850.1 4501636 4502424 D PFAM: protein of unknown function DUF218; KEGG: rec:RHECIAT_CH0000139 hypothetical protein; hypothetical protein 4501636..4502424 Rhizobium leguminosarum bv. trifolii WSM1325 8015147 YP_002978152.1 CDS Rleg_4374 NC_012850.1 4502518 4502991 R KEGG: ret:RHE_CH00104 hypothetical protein; hypothetical protein complement(4502518..4502991) Rhizobium leguminosarum bv. trifolii WSM1325 8015148 YP_002978153.1 CDS Rleg_4375 NC_012850.1 4503164 4503799 D PFAM: protein of unknown function UPF0126; KEGG: rec:RHECIAT_CH0000141 hypothetical conserved membrane protein; hypothetical protein 4503164..4503799 Rhizobium leguminosarum bv. trifolii WSM1325 8015149 YP_002978154.1 CDS Rleg_4376 NC_012850.1 4503914 4504333 R PFAM: ferric-uptake regulator; KEGG: rec:RHECIAT_CH0000142 iron transcriptional regulator protein; ferric uptake regulator family protein complement(4503914..4504333) Rhizobium leguminosarum bv. trifolii WSM1325 8015150 YP_002978155.1 CDS Rleg_4377 NC_012850.1 4504515 4504664 D hypothetical protein 4504515..4504664 Rhizobium leguminosarum bv. trifolii WSM1325 8015151 YP_002978156.1 CDS Rleg_4378 NC_012850.1 4504633 4505148 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 4504633..4505148 Rhizobium leguminosarum bv. trifolii WSM1325 8015922 YP_002978157.1 CDS Rleg_4379 NC_012850.1 4505194 4506426 D FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 4505194..4506426 Rhizobium leguminosarum bv. trifolii WSM1325 8015152 YP_002978158.1 CDS Rleg_4380 NC_012850.1 4506431 4507237 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 4506431..4507237 Rhizobium leguminosarum bv. trifolii WSM1325 8015153 YP_002978159.1 CDS Rleg_4381 NC_012850.1 4507335 4508351 R PFAM: methyltransferase small; KEGG: rec:RHECIAT_CH0000146 probable rRNA (guanine-N(2)-)-methyltransferase protein; SNP /replace=G; methyltransferase small complement(4507335..4508351) Rhizobium leguminosarum bv. trifolii WSM1325 8015154 YP_002978160.1 CDS Rleg_4382 NC_012850.1 4508633 4510771 R KEGG: ret:RHE_CH00111 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase complement(4508633..4510771) Rhizobium leguminosarum bv. trifolii WSM1325 8015155 YP_002978161.1 CDS rpsO NC_012850.1 4511120 4511389 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(4511120..4511389) Rhizobium leguminosarum bv. trifolii WSM1325 8015156 YP_002978162.1 CDS Rleg_4384 NC_012850.1 4511541 4512392 R PFAM: alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0000150 hydrolase protein; alpha/beta hydrolase complement(4511541..4512392) Rhizobium leguminosarum bv. trifolii WSM1325 8015157 YP_002978163.1 CDS truB NC_012850.1 4512509 4513441 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(4512509..4513441) Rhizobium leguminosarum bv. trifolii WSM1325 8015158 YP_002978164.1 CDS rbfA NC_012850.1 4513455 4513859 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(4513455..4513859) Rhizobium leguminosarum bv. trifolii WSM1325 8015159 YP_002978165.1 CDS infB NC_012850.1 4514010 4516763 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(4514010..4516763) Rhizobium leguminosarum bv. trifolii WSM1325 8015160 YP_002978166.1 CDS Rleg_4388 NC_012850.1 4516865 4517557 R PFAM: protein of unknown function DUF448; KEGG: ret:RHE_CH00117 hypothetical protein; hypothetical protein complement(4516865..4517557) Rhizobium leguminosarum bv. trifolii WSM1325 8015161 YP_002978167.1 CDS nusA NC_012850.1 4517554 4519155 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(4517554..4519155) Rhizobium leguminosarum bv. trifolii WSM1325 8015162 YP_002978168.1 CDS Rleg_4390 NC_012850.1 4519215 4519820 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(4519215..4519820) Rhizobium leguminosarum bv. trifolii WSM1325 8015163 YP_002978169.1 CDS Rleg_4392 NC_012850.1 4521720 4522175 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0000158 acetyltransferase protein; N-acetyltransferase GCN5 4521720..4522175 Rhizobium leguminosarum bv. trifolii WSM1325 8015165 YP_002978170.1 CDS Rleg_4393 NC_012850.1 4522182 4523615 R TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding domain 1 protein; KEGG: rec:RHECIAT_CH0000159 probable transglycosylase protein; lytic murein transglycosylase complement(4522182..4523615) Rhizobium leguminosarum bv. trifolii WSM1325 8015166 YP_002978171.1 CDS recR NC_012850.1 4523628 4524233 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(4523628..4524233) Rhizobium leguminosarum bv. trifolii WSM1325 8015167 YP_002978172.1 CDS Rleg_4395 NC_012850.1 4524291 4524920 D PFAM: MOSC domain containing protein; KEGG: ret:RHE_CH00124 hypothetical protein; MOSC domain-containing protein 4524291..4524920 Rhizobium leguminosarum bv. trifolii WSM1325 8015168 YP_002978173.1 CDS Rleg_4396 NC_012850.1 4524948 4525271 R PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0000162 hypothetical protein; hypothetical protein complement(4524948..4525271) Rhizobium leguminosarum bv. trifolii WSM1325 8015169 YP_002978174.1 CDS Rleg_4397 NC_012850.1 4525292 4527169 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma/tau complement(4525292..4527169) Rhizobium leguminosarum bv. trifolii WSM1325 8015923 YP_002978175.1 CDS Rleg_4398 NC_012850.1 4527400 4527810 D PFAM: histidine triad (HIT) protein; KEGG: ret:RHE_CH00127 hypothetical protein; histidine triad (HIT) protein 4527400..4527810 Rhizobium leguminosarum bv. trifolii WSM1325 8015171 YP_002978176.1 CDS Rleg_4399 NC_012850.1 4527807 4528766 D PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: ret:RHE_CH00128 MutT/NUDIX family NTP pyrophosphohydrolase; NAD(+) diphosphatase 4527807..4528766 Rhizobium leguminosarum bv. trifolii WSM1325 8015924 YP_002978177.1 CDS Rleg_4400 NC_012850.1 4528771 4529466 D PFAM: hypothetical protein; KEGG: rec:RHECIAT_CH0000166 transcriptional regulator protein; hypothetical protein 4528771..4529466 Rhizobium leguminosarum bv. trifolii WSM1325 8015172 YP_002978178.1 CDS Rleg_4401 NC_012850.1 4529539 4529799 D KEGG: rec:RHECIAT_CH0000167 hypothetical protein; hypothetical protein 4529539..4529799 Rhizobium leguminosarum bv. trifolii WSM1325 8015173 YP_002978179.1 CDS Rleg_4402 NC_012850.1 4530037 4530405 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_CH0000168 glyoxalase/dioxygenase protein; glyoxalase/bleomycin resistance protein/dioxygenase 4530037..4530405 Rhizobium leguminosarum bv. trifolii WSM1325 8015925 YP_002978180.1 CDS Rleg_4403 NC_012850.1 4530536 4531390 R catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase complement(4530536..4531390) Rhizobium leguminosarum bv. trifolii WSM1325 8015174 YP_002978181.1 CDS Rleg_4404 NC_012850.1 4531401 4532156 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(4531401..4532156) Rhizobium leguminosarum bv. trifolii WSM1325 8015175 YP_002978182.1 CDS Rleg_4405 NC_012850.1 4532311 4532874 D PFAM: cytochrome C class I; KEGG: ret:RHE_CH00133 cytochrome-c protein; cytochrome C class I 4532311..4532874 Rhizobium leguminosarum bv. trifolii WSM1325 8015176 YP_002978183.1 CDS Rleg_4406 NC_012850.1 4532995 4533942 R PFAM: Auxin Efflux Carrier; KEGG: rec:RHECIAT_CH0000172 probable ABC transporter, permease protein; auxin efflux carrier family protein complement(4532995..4533942) Rhizobium leguminosarum bv. trifolii WSM1325 8015177 YP_002978184.1 CDS Rleg_4407 NC_012850.1 4534457 4535449 D PFAM: PfkB domain protein; KEGG: rec:RHECIAT_CH0000173 sugar kinase protein; PfkB domain-containing protein 4534457..4535449 Rhizobium leguminosarum bv. trifolii WSM1325 8015178 YP_002978185.1 CDS Rleg_4408 NC_012850.1 4535442 4535981 R PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: ret:RHE_CH00136 hypothetical protein; hypothetical protein complement(4535442..4535981) Rhizobium leguminosarum bv. trifolii WSM1325 8015179 YP_002978186.1 CDS Rleg_4409 NC_012850.1 4536166 4537167 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ret:RHE_CH00138 D-2-hydroxyacid dehydrogenase protein; glyoxylate reductase 4536166..4537167 Rhizobium leguminosarum bv. trifolii WSM1325 8015180 YP_002978187.1 CDS Rleg_4410 NC_012850.1 4537181 4537669 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0000176 acetyltransferase protein; N-acetyltransferase GCN5 complement(4537181..4537669) Rhizobium leguminosarum bv. trifolii WSM1325 8015181 YP_002978188.1 CDS Rleg_4411 NC_012850.1 4537666 4538490 R ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB complement(4537666..4538490) Rhizobium leguminosarum bv. trifolii WSM1325 8015182 YP_002978189.1 CDS recF NC_012850.1 4538487 4539611 R Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F complement(4538487..4539611) Rhizobium leguminosarum bv. trifolii WSM1325 8015183 YP_002978190.1 CDS Rleg_4413 NC_012850.1 4540081 4540446 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0000180 transcriptional regulator protein, Cro/CI family; XRE family transcriptional regulator 4540081..4540446 Rhizobium leguminosarum bv. trifolii WSM1325 8015184 YP_002978191.1 CDS Rleg_4414 NC_012850.1 4540607 4540807 R KEGG: ret:RHE_CH00143 hypothetical protein; hypothetical protein complement(4540607..4540807) Rhizobium leguminosarum bv. trifolii WSM1325 8015185 YP_002978192.1 CDS Rleg_4415 NC_012850.1 4541120 4542247 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(4541120..4542247) Rhizobium leguminosarum bv. trifolii WSM1325 8015186 YP_002978193.1 CDS dnaK NC_012850.1 4542334 4544250 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(4542334..4544250) Rhizobium leguminosarum bv. trifolii WSM1325 8015926 YP_002978194.1 CDS Rleg_4417 NC_012850.1 4544635 4546974 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rec:RHECIAT_CH0000184 probable penicillin binding protein; penicillin-binding protein complement(4544635..4546974) Rhizobium leguminosarum bv. trifolii WSM1325 8015187 YP_002978195.1 CDS Rleg_4418 NC_012850.1 4547178 4547399 R KEGG: rec:RHECIAT_CH0000185 hypothetical protein; hypothetical protein complement(4547178..4547399) Rhizobium leguminosarum bv. trifolii WSM1325 8015188 YP_002978196.1 CDS Rleg_4419 NC_012850.1 4547904 4548578 R PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: ret:RHE_CH00147 hypothetical protein; SH3 type 3 domain-containing protein complement(4547904..4548578) Rhizobium leguminosarum bv. trifolii WSM1325 8015189 YP_002978197.1 CDS Rleg_4420 NC_012850.1 4548967 4550355 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ret:RHE_CH00148 hypothetical protein; hypothetical protein complement(4548967..4550355) Rhizobium leguminosarum bv. trifolii WSM1325 8015190 YP_002978198.1 CDS Rleg_4421 NC_012850.1 4550570 4552909 D KEGG: rec:RHECIAT_CH0000188 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) 4550570..4552909 Rhizobium leguminosarum bv. trifolii WSM1325 8015191 YP_002978199.1 CDS Rleg_4422 NC_012850.1 4553028 4553444 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rec:RHECIAT_CH0000189 probable transcriptional regulator protein, MarR family; SNP /replace=C; MarR family transcriptional regulator complement(4553028..4553444) Rhizobium leguminosarum bv. trifolii WSM1325 8015927 YP_002978200.1 CDS Rleg_4423 NC_012850.1 4553938 4556988 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 4553938..4556988 Rhizobium leguminosarum bv. trifolii WSM1325 8015192 YP_002978201.1 CDS Rleg_4424 NC_012850.1 4557243 4559588 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: rec:RHECIAT_CH0000191 cell division protein; cell division protein FtsK 4557243..4559588 Rhizobium leguminosarum bv. trifolii WSM1325 8015193 YP_002978202.1 CDS Rleg_4425 NC_012850.1 4559702 4560301 R TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: rec:RHECIAT_CH0000198 ATP-binding phosphonate metabolism protein (ribose 1,5-bisphosphate phosphokinase); phosphonate metabolism protein/1,5-bisphosphokinase PhnN complement(4559702..4560301) Rhizobium leguminosarum bv. trifolii WSM1325 8015194 YP_002978203.1 CDS Rleg_4426 NC_012850.1 4560298 4561422 R TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; amidohydrolase; KEGG: ret:RHE_CH00155 phosphonate metabolism protein; phosphonate metabolism protein PhnM complement(4560298..4561422) Rhizobium leguminosarum bv. trifolii WSM1325 8015195 YP_002978204.1 CDS Rleg_4427 NC_012850.1 4561451 4562146 R TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045; KEGG: rec:RHECIAT_CH0000200 hypothetical protein; phosphonate metabolism protein complement(4561451..4562146) Rhizobium leguminosarum bv. trifolii WSM1325 8015928 YP_002978205.1 CDS Rleg_4428 NC_012850.1 4562287 4563630 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000201 probable phosphonate ABC transporter, permease protein; phosphonate ABC transporter membrane protein complement(4562287..4563630) Rhizobium leguminosarum bv. trifolii WSM1325 8015196 YP_002978206.1 CDS Rleg_4429 NC_012850.1 4563638 4564597 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000202 probable phosphonate ABC transporter, permease protein; phosphonate ABC transporter membrane protein complement(4563638..4564597) Rhizobium leguminosarum bv. trifolii WSM1325 8015197 YP_002978207.1 CDS Rleg_4430 NC_012850.1 4564726 4565631 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rec:RHECIAT_CH0000203 probable phosphonate ABC transporter, substrate-binding protein; phosphonate ABC transporter substrate-binding protein complement(4564726..4565631) Rhizobium leguminosarum bv. trifolii WSM1325 8015198 YP_002978208.1 CDS Rleg_4431 NC_012850.1 4565718 4566572 R KEGG: ret:RHE_CH00160 phosphonate ABC transporter ATP-binding; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: AAA ATPase; phosphonate ABC transporter ATPase complement(4565718..4566572) Rhizobium leguminosarum bv. trifolii WSM1325 8015199 YP_002978209.1 CDS Rleg_4432 NC_012850.1 4566687 4567304 R TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: ret:RHE_CH00161 acetyltransferase protein; phosphonate metabolism protein complement(4566687..4567304) Rhizobium leguminosarum bv. trifolii WSM1325 8015200 YP_002978210.1 CDS Rleg_4433 NC_012850.1 4567301 4568008 R KEGG: ret:RHE_CH00162 phosphonate ABC transporter ATP-binding; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL complement(4567301..4568008) Rhizobium leguminosarum bv. trifolii WSM1325 8015201 YP_002978211.1 CDS phnK NC_012850.1 4568035 4568811 R KEGG: rec:RHECIAT_CH0000207 probable phosphonate ABC transporter, ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK complement(4568035..4568811) Rhizobium leguminosarum bv. trifolii WSM1325 8015202 YP_002978212.1 CDS Rleg_4435 NC_012850.1 4568808 4569683 R PFAM: phosphonate metabolism PhnJ; KEGG: ret:RHE_CH00164 C-P (carbon-phosphorus) lyase component protein; phosphonate metabolism protein PhnJ complement(4568808..4569683) Rhizobium leguminosarum bv. trifolii WSM1325 8015203 YP_002978213.1 CDS Rleg_4436 NC_012850.1 4569680 4570786 R PFAM: phosphonate metabolism; KEGG: rec:RHECIAT_CH0000209 phosphonate metabolism protein; phosphonate metabolism protein complement(4569680..4570786) Rhizobium leguminosarum bv. trifolii WSM1325 8015204 YP_002978214.1 CDS phnH NC_012850.1 4570791 4571399 R TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: ret:RHE_CH00166 carbon-phosphorus lyase complex subunit; carbon-phosphorus lyase complex subunit complement(4570791..4571399) Rhizobium leguminosarum bv. trifolii WSM1325 8015205 YP_002978215.1 CDS Rleg_4438 NC_012850.1 4571399 4571875 R TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: rec:RHECIAT_CH0000211 phosphonate metabolism protein; phosphonate C-P lyase system protein PhnG complement(4571399..4571875) Rhizobium leguminosarum bv. trifolii WSM1325 8015206 YP_002978216.1 CDS Rleg_4439 NC_012850.1 4571994 4572731 D KEGG: rec:RHECIAT_CH0000212 probable transcriptional regulator protein, GntR family; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4571994..4572731 Rhizobium leguminosarum bv. trifolii WSM1325 8015929 YP_002978217.1 CDS Rleg_4440 NC_012850.1 4572771 4573406 R catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(4572771..4573406) Rhizobium leguminosarum bv. trifolii WSM1325 8015207 YP_002978218.1 CDS Rleg_4441 NC_012850.1 4573428 4574252 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(4573428..4574252) Rhizobium leguminosarum bv. trifolii WSM1325 8015208 YP_002978219.1 CDS Rleg_4442 NC_012850.1 4574268 4576055 R PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000215 multidrug ABC transporter, ATPase and permease protein; ABC transporter complement(4574268..4576055) Rhizobium leguminosarum bv. trifolii WSM1325 8015209 YP_002978220.1 CDS glk NC_012850.1 4576206 4577231 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(4576206..4577231) Rhizobium leguminosarum bv. trifolii WSM1325 8015210 YP_002978221.1 CDS mgsA NC_012850.1 4577249 4577629 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(4577249..4577629) Rhizobium leguminosarum bv. trifolii WSM1325 8015930 YP_002978222.1 CDS mepA NC_012850.1 4577756 4578832 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(4577756..4578832) Rhizobium leguminosarum bv. trifolii WSM1325 8015211 YP_002978223.1 CDS Rleg_4446 NC_012850.1 4579098 4580930 D PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_CH0000219 probable peptide ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein 4579098..4580930 Rhizobium leguminosarum bv. trifolii WSM1325 8015212 YP_002978224.1 CDS Rleg_4447 NC_012850.1 4581081 4582169 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000220 probable peptide ABC transporter, permease protein; ABC transporter permease 4581081..4582169 Rhizobium leguminosarum bv. trifolii WSM1325 8015213 YP_002978225.1 CDS Rleg_4448 NC_012850.1 4582169 4583317 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000221 peptide ABC transporter, permease protein; ABC transporter permease 4582169..4583317 Rhizobium leguminosarum bv. trifolii WSM1325 8015214 YP_002978226.1 CDS Rleg_4449 NC_012850.1 4583314 4584951 D PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH00178 peptide ABC transporter, ATP binding protein; ABC transporter 4583314..4584951 Rhizobium leguminosarum bv. trifolii WSM1325 8015215 YP_002978227.1 CDS Rleg_4450 NC_012850.1 4584960 4585919 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0000223 2-hydroxyacid dehydrogenase protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 4584960..4585919 Rhizobium leguminosarum bv. trifolii WSM1325 8015216 YP_002978228.1 CDS Rleg_4451 NC_012850.1 4586010 4586354 D KEGG: ret:RHE_CH00180 hypothetical protein; hypothetical protein 4586010..4586354 Rhizobium leguminosarum bv. trifolii WSM1325 8015217 YP_002978229.1 CDS Rleg_4452 NC_012850.1 4586542 4587846 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 4586542..4587846 Rhizobium leguminosarum bv. trifolii WSM1325 8015931 YP_002978230.1 CDS Rleg_4453 NC_012850.1 4587828 4588067 R KEGG: rec:RHECIAT_CH0000226 hypothetical protein; hypothetical protein complement(4587828..4588067) Rhizobium leguminosarum bv. trifolii WSM1325 8015218 YP_002978231.1 CDS Rleg_4454 NC_012850.1 4588481 4588690 R KEGG: rec:RHECIAT_CH0000227 hypothetical protein; hypothetical protein complement(4588481..4588690) Rhizobium leguminosarum bv. trifolii WSM1325 8015219 YP_002978232.1 CDS Rleg_4455 NC_012850.1 4588933 4589484 R PFAM: protein of unknown function DUF1234; KEGG: hypothetical protein ; K07002; hypothetical protein complement(4588933..4589484) Rhizobium leguminosarum bv. trifolii WSM1325 8015220 YP_002978233.1 CDS Rleg_4456 NC_012850.1 4589595 4590071 D PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; SMART: regulatory protein AsnC/Lrp family; KEGG: mlo:mlr1825 transcriptional regulator; AsnC family transcriptional regulator 4589595..4590071 Rhizobium leguminosarum bv. trifolii WSM1325 8015221 YP_002978234.1 CDS Rleg_4457 NC_012850.1 4590494 4590811 D KEGG: ret:RHE_CH00186 hypothetical protein; hypothetical protein 4590494..4590811 Rhizobium leguminosarum bv. trifolii WSM1325 8015223 YP_002978235.1 CDS Rleg_4458 NC_012850.1 4591107 4592099 D PFAM: basic membrane lipoprotein; KEGG: rec:RHECIAT_CH0000232 probable outer membrane lipoprotein; basic membrane lipoprotein 4591107..4592099 Rhizobium leguminosarum bv. trifolii WSM1325 8015224 YP_002978236.1 CDS Rleg_4459 NC_012850.1 4592188 4593699 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH00188 sugar ABC transporter, ATP-binding protein; ABC transporter 4592188..4593699 Rhizobium leguminosarum bv. trifolii WSM1325 8015225 YP_002978237.1 CDS Rleg_4460 NC_012850.1 4593707 4594810 D PFAM: inner-membrane translocator; KEGG: ret:RHE_CH00189 sugar ABC transporter, permease protein; inner-membrane translocator 4593707..4594810 Rhizobium leguminosarum bv. trifolii WSM1325 8015226 YP_002978238.1 CDS Rleg_4461 NC_012850.1 4594821 4595792 D PFAM: inner-membrane translocator; KEGG: ret:RHE_CH00190 sugar ABC transporter, permease protein; inner-membrane translocator 4594821..4595792 Rhizobium leguminosarum bv. trifolii WSM1325 8015227 YP_002978239.1 CDS Rleg_4462 NC_012850.1 4595794 4596183 D Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 4595794..4596183 Rhizobium leguminosarum bv. trifolii WSM1325 8015228 YP_002978240.1 CDS Rleg_4463 NC_012850.1 4596180 4596980 D catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 4596180..4596980 Rhizobium leguminosarum bv. trifolii WSM1325 8015932 YP_002978241.1 CDS Rleg_4464 NC_012850.1 4597095 4597871 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 4597095..4597871 Rhizobium leguminosarum bv. trifolii WSM1325 8015229 YP_002978242.1 CDS deoA NC_012850.1 4597873 4599180 D Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 4597873..4599180 Rhizobium leguminosarum bv. trifolii WSM1325 8015230 YP_002978243.1 CDS Rleg_4466 NC_012850.1 4599187 4599756 R KEGG: ret:RHE_CH00195 hypothetical protein; hypothetical protein complement(4599187..4599756) Rhizobium leguminosarum bv. trifolii WSM1325 8015231 YP_002978244.1 CDS upp NC_012850.1 4599882 4600511 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(4599882..4600511) Rhizobium leguminosarum bv. trifolii WSM1325 8015232 YP_002978245.1 CDS Rleg_4468 NC_012850.1 4600605 4601573 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(4600605..4601573) Rhizobium leguminosarum bv. trifolii WSM1325 8015933 YP_002978246.1 CDS Rleg_4469 NC_012850.1 4601570 4602790 R catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase complement(4601570..4602790) Rhizobium leguminosarum bv. trifolii WSM1325 8015233 YP_002978247.1 CDS Rleg_4470 NC_012850.1 4602969 4603550 R KEGG: ret:RHE_CH00199 hypothetical protein; hypothetical protein complement(4602969..4603550) Rhizobium leguminosarum bv. trifolii WSM1325 8015234 YP_002978248.1 CDS Rleg_4471 NC_012850.1 4603550 4604182 R PFAM: TadE family protein; KEGG: rec:RHECIAT_CH0000245 hypothetical protein; TadE family protein complement(4603550..4604182) Rhizobium leguminosarum bv. trifolii WSM1325 8015235 YP_002978249.1 CDS Rleg_4472 NC_012850.1 4604299 4604709 R KEGG: rec:RHECIAT_CH0000246 pilus subunit transmembrane protein; pilus subunit transmembrane protein complement(4604299..4604709) Rhizobium leguminosarum bv. trifolii WSM1325 8015236 YP_002978250.1 CDS Rleg_4473 NC_012850.1 4605090 4605278 D PFAM: Flp/Fap pilin component; KEGG: rec:RHECIAT_CH0000247 pilus subunit protein; Flp/Fap pilin component 4605090..4605278 Rhizobium leguminosarum bv. trifolii WSM1325 8015237 YP_002978251.1 CDS Rleg_4474 NC_012850.1 4605403 4605915 D PFAM: peptidase A24A prepilin type IV; KEGG: ret:RHE_CH00203 prepilin peptidase protein; peptidase A24A prepilin type IV 4605403..4605915 Rhizobium leguminosarum bv. trifolii WSM1325 8015934 YP_002978252.1 CDS Rleg_4475 NC_012850.1 4606026 4606841 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rec:RHECIAT_CH0000249 pilus assembly protein; Flp pilus assembly protein CpaB 4606026..4606841 Rhizobium leguminosarum bv. trifolii WSM1325 8015238 YP_002978253.1 CDS Rleg_4476 NC_012850.1 4606852 4608351 D PFAM: type II and III secretion system protein; transport-associated; KEGG: rec:RHECIAT_CH0000250 pilus assembly secretion protein; type II and III secretion system protein 4606852..4608351 Rhizobium leguminosarum bv. trifolii WSM1325 8015239 YP_002978254.1 CDS Rleg_4477 NC_012850.1 4608396 4609103 D TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: rec:RHECIAT_CH0000251 pilus assembly protein; pilus biogenesis lipoprotein CpaD 4608396..4609103 Rhizobium leguminosarum bv. trifolii WSM1325 8015240 YP_002978255.1 CDS Rleg_4478 NC_012850.1 4609118 4610395 D KEGG: ret:RHE_CH00207 pilus assembly protein, response regulator protein; response regulator receiver protein 4609118..4610395 Rhizobium leguminosarum bv. trifolii WSM1325 8015241 YP_002978256.1 CDS Rleg_4479 NC_012850.1 4610528 4612003 D PFAM: type II secretion system protein E; KEGG: ret:RHE_CH00208 pilus assembly secretion ATP-binding protein; type II secretion system protein E 4610528..4612003 Rhizobium leguminosarum bv. trifolii WSM1325 8015242 YP_002978257.1 CDS Rleg_4480 NC_012850.1 4612009 4613016 D PFAM: type II secretion system protein; KEGG: rec:RHECIAT_CH0000254 probable pilus assembly protein; type II secretion system protein 4612009..4613016 Rhizobium leguminosarum bv. trifolii WSM1325 8015243 YP_002978258.1 CDS Rleg_4481 NC_012850.1 4613032 4614018 D PFAM: type II secretion system protein; KEGG: rec:RHECIAT_CH0000255 pilus component protein; type II secretion system protein 4613032..4614018 Rhizobium leguminosarum bv. trifolii WSM1325 8015244 YP_002978259.1 CDS Rleg_4482 NC_012850.1 4614216 4614848 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0000256 probable amino acid efflux protein, LysE family; lysine exporter protein LysE/YggA 4614216..4614848 Rhizobium leguminosarum bv. trifolii WSM1325 8015245 YP_002978260.1 CDS Rleg_4483 NC_012850.1 4614897 4615733 R PFAM: tetratricopeptide TPR_4; KEGG: rec:RHECIAT_CH0000257 pilus assembly protein (contains TPR repeats); hypothetical protein complement(4614897..4615733) Rhizobium leguminosarum bv. trifolii WSM1325 8015935 YP_002978261.1 CDS Rleg_4484 NC_012850.1 4615878 4617269 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: ret:RHE_CH00213 leucine aminopeptidase protein; leucyl aminopeptidase 4615878..4617269 Rhizobium leguminosarum bv. trifolii WSM1325 8015246 YP_002978262.1 CDS Rleg_4485 NC_012850.1 4617303 4617416 D hypothetical protein 4617303..4617416 Rhizobium leguminosarum bv. trifolii WSM1325 8015247 YP_002978263.1 CDS Rleg_4486 NC_012850.1 4617440 4617790 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_CH00216 MarR family transcriptional regulator; MarR family transcriptional regulator 4617440..4617790 Rhizobium leguminosarum bv. trifolii WSM1325 8015248 YP_002978264.1 CDS Rleg_4487 NC_012850.1 4617802 4618659 D PFAM: NLP/P60 protein; KEGG: ret:RHE_CH00217 endopeptidase-related protein; NLP/P60 protein 4617802..4618659 Rhizobium leguminosarum bv. trifolii WSM1325 8015249 YP_002978265.1 CDS Rleg_4488 NC_012850.1 4618660 4620051 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(4618660..4620051) Rhizobium leguminosarum bv. trifolii WSM1325 8015250 YP_002978266.1 CDS Rleg_4489 NC_012850.1 4620088 4620951 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH00219 peptide ABC transporter permease; ABC transporter permease complement(4620088..4620951) Rhizobium leguminosarum bv. trifolii WSM1325 8015251 YP_002978267.1 CDS Rleg_4490 NC_012850.1 4620955 4621902 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0000263 probable ABC transporter, permease protein; ABC transporter permease complement(4620955..4621902) Rhizobium leguminosarum bv. trifolii WSM1325 8015252 YP_002978268.1 CDS Rleg_4491 NC_012850.1 4622177 4623706 R PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_CH0000264 probable ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein complement(4622177..4623706) Rhizobium leguminosarum bv. trifolii WSM1325 8015253 YP_002978269.1 CDS Rleg_4492 NC_012850.1 4623856 4624776 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator complement(4623856..4624776) Rhizobium leguminosarum bv. trifolii WSM1325 8015254 YP_002978270.1 CDS Rleg_4493 NC_012850.1 4624891 4625886 R PFAM: peptidase S58 DmpA; KEGG: rec:RHECIAT_CH0000265 peptidase protein; peptidase S58 DmpA complement(4624891..4625886) Rhizobium leguminosarum bv. trifolii WSM1325 8015255 YP_002978271.1 CDS Rleg_4494 NC_012850.1 4626115 4626309 R KEGG: rec:RHECIAT_CH0000266 hypothetical protein; hypothetical protein complement(4626115..4626309) Rhizobium leguminosarum bv. trifolii WSM1325 8015256 YP_002978272.1 CDS Rleg_4495 NC_012850.1 4626831 4629752 R PFAM: aminotransferase class-III; aminoglycoside phosphotransferase; KEGG: ret:RHE_CH00224 hypothetical protein; hypothetical protein complement(4626831..4629752) Rhizobium leguminosarum bv. trifolii WSM1325 8015257 YP_002978273.1 CDS purU NC_012850.1 4629866 4630750 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(4629866..4630750) Rhizobium leguminosarum bv. trifolii WSM1325 8015258 YP_002978274.1 CDS Rleg_4497 NC_012850.1 4630966 4631985 R PFAM: acyltransferase; KEGG: rec:RHECIAT_CH0000269 exopolysaccharide production protein; acyltransferase complement(4630966..4631985) Rhizobium leguminosarum bv. trifolii WSM1325 8015259 YP_002978275.1 CDS Rleg_4498 NC_012850.1 4632031 4633302 R KEGG: rec:RHECIAT_CH0000270 probable polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(4632031..4633302) Rhizobium leguminosarum bv. trifolii WSM1325 8015936 YP_002978276.1 CDS Rleg_4499 NC_012850.1 4633305 4634354 R PFAM: glycoside hydrolase family 5; KEGG: rec:RHECIAT_CH0000271 probable carboxymethyl cellulase protein; cellulase complement(4633305..4634354) Rhizobium leguminosarum bv. trifolii WSM1325 8015260 YP_002978277.1 CDS Rleg_4500 NC_012850.1 4634489 4636102 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: rec:RHECIAT_CH0000272 probable succinoglycan biosynthesis transport protein; lipopolysaccharide biosynthesis protein 4634489..4636102 Rhizobium leguminosarum bv. trifolii WSM1325 8015261 YP_002978278.1 CDS Rleg_4501 NC_012850.1 4636162 4636494 D KEGG: ret:RHE_CH00230 hypothetical protein; hypothetical protein 4636162..4636494 Rhizobium leguminosarum bv. trifolii WSM1325 8015937 YP_002978279.1 CDS Rleg_4502 NC_012850.1 4636501 4636620 R hypothetical protein complement(4636501..4636620) Rhizobium leguminosarum bv. trifolii WSM1325 8015262 YP_002978280.1 CDS Rleg_4503 NC_012850.1 4636825 4637583 R PFAM: Cephalosporin hydroxylase; KEGG: azc:AZC_3471 cephalosporin hydroxylase; cephalosporin hydroxylase complement(4636825..4637583) Rhizobium leguminosarum bv. trifolii WSM1325 8015938 YP_002978281.1 CDS Rleg_4504 NC_012850.1 4637616 4638764 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pfo:Pfl01_1514 DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase complement(4637616..4638764) Rhizobium leguminosarum bv. trifolii WSM1325 8015263 YP_002978282.1 CDS Rleg_4505 NC_012850.1 4639050 4639802 D PFAM: Cephalosporin hydroxylase; KEGG: azc:AZC_3471 cephalosporin hydroxylase; cephalosporin hydroxylase 4639050..4639802 Rhizobium leguminosarum bv. trifolii WSM1325 8015264 YP_002978283.1 CDS Rleg_4506 NC_012850.1 4639885 4640463 D KEGG: cak:Caul_4924 hexapaptide repeat-containing transferase; hexapaptide repeat-containing transferase 4639885..4640463 Rhizobium leguminosarum bv. trifolii WSM1325 8015265 YP_002978284.1 CDS Rleg_4507 NC_012850.1 4640698 4641936 R PFAM: glycosyl transferase family 2; KEGG: azc:AZC_3476 glycosyltransferase; family 2 glycosyl transferase complement(4640698..4641936) Rhizobium leguminosarum bv. trifolii WSM1325 8015266 YP_002978285.1 CDS Rleg_4508 NC_012850.1 4641933 4642475 R KEGG: azc:AZC_3477 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(4641933..4642475) Rhizobium leguminosarum bv. trifolii WSM1325 8015267 YP_002978286.1 CDS Rleg_4509 NC_012850.1 4642472 4643707 R PFAM: C-methyltransferase; methyltransferase domain protein; methyltransferase type 12; methyltransferase type 11; KEGG: azc:AZC_3478 NDP-hexose 3-C-methyltransferase protein; C-methyltransferase complement(4642472..4643707) Rhizobium leguminosarum bv. trifolii WSM1325 8015268 YP_002978287.1 CDS Rleg_4510 NC_012850.1 4643704 4644768 R TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: azc:AZC_3479 CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase complement(4643704..4644768) Rhizobium leguminosarum bv. trifolii WSM1325 8015269 YP_002978288.1 CDS Rleg_4511 NC_012850.1 4644759 4645532 R TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; KEGG: azc:AZC_3480 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase complement(4644759..4645532) Rhizobium leguminosarum bv. trifolii WSM1325 8015270 YP_002978289.1 CDS Rleg_4512 NC_012850.1 4646048 4646332 R KEGG: ppf:Pput_4881 poly(hydroxyalkanoate) granule-associated protein; poly(hydroxyalkanoate) granule-associated protein complement(4646048..4646332) Rhizobium leguminosarum bv. trifolii WSM1325 8015271 YP_002978290.1 CDS Rleg_4513 NC_012850.1 4646826 4647245 D PFAM: BA14K family protein; KEGG: rec:RHECIAT_CH0000276 hypothetical protein; BA14K family protein 4646826..4647245 Rhizobium leguminosarum bv. trifolii WSM1325 8015273 YP_002978291.1 CDS Rleg_4514 NC_012850.1 4647255 4647548 R TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: rec:RHECIAT_CH0000277 hypothetical protein; hypothetical protein complement(4647255..4647548) Rhizobium leguminosarum bv. trifolii WSM1325 8015274 YP_002978292.1 CDS Rleg_4515 NC_012850.1 4647678 4648415 D PFAM: glutamine amidotransferase class-I; KEGG: rec:RHECIAT_CH0000278 probable glutamine amidotransferase protein; glutamine amidotransferase 4647678..4648415 Rhizobium leguminosarum bv. trifolii WSM1325 8015275 YP_002978293.1 CDS Rleg_4516 NC_012850.1 4648427 4648975 D KEGG: rec:RHECIAT_CH0000279 maltose O-acetyltransferase protein; maltose O-acetyltransferase protein 4648427..4648975 Rhizobium leguminosarum bv. trifolii WSM1325 8015276 YP_002978294.1 CDS Rleg_4517 NC_012850.1 4649060 4649512 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rec:RHECIAT_CH0000280 glutathione-dependent formaldehyde-activating protein; glutathione-dependent formaldehyde-activating protein 4649060..4649512 Rhizobium leguminosarum bv. trifolii WSM1325 8015277 YP_002978295.1 CDS Rleg_4518 NC_012850.1 4649515 4649814 R PFAM: CcdB protein; KEGG: rec:RHECIAT_CH0000281 hypothetical protein; CcdB protein complement(4649515..4649814) Rhizobium leguminosarum bv. trifolii WSM1325 8015278 YP_002978296.1 CDS Rleg_4519 NC_012850.1 4649814 4650044 R KEGG: rec:RHECIAT_CH0000282 hypothetical protein; hypothetical protein complement(4649814..4650044) Rhizobium leguminosarum bv. trifolii WSM1325 8015279 YP_002978297.1 CDS Rleg_4520 NC_012850.1 4650103 4651935 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(4650103..4651935) Rhizobium leguminosarum bv. trifolii WSM1325 8015280 YP_002978298.1 CDS Rleg_4521 NC_012850.1 4652012 4652710 R PFAM: TENA/THI-4 domain protein; KEGG: rec:RHECIAT_CH0000284 probable transcriptional activator regulator protein, TenA family; TenA family transcriptional activator complement(4652012..4652710) Rhizobium leguminosarum bv. trifolii WSM1325 8015939 YP_002978299.1 CDS Rleg_4522 NC_012850.1 4652862 4653428 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0000285 probable transcriptional regulator protein, LacI family; XRE family transcriptional regulator 4652862..4653428 Rhizobium leguminosarum bv. trifolii WSM1325 8015281 YP_002978300.1 CDS Rleg_4523 NC_012850.1 4653453 4653971 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0000286 probable acetyltransferase protein; N-acetyltransferase GCN5 4653453..4653971 Rhizobium leguminosarum bv. trifolii WSM1325 8015282 YP_002978301.1 CDS Rleg_4524 NC_012850.1 4653987 4654598 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH00252 haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(4653987..4654598) Rhizobium leguminosarum bv. trifolii WSM1325 8015283 YP_002978302.1 CDS Rleg_4525 NC_012850.1 4654732 4655757 D PFAM: histone deacetylase superfamily; KEGG: rec:RHECIAT_CH0000288 acetylpolyamine aminohydrolase protein; histone deacetylase superfamily protein 4654732..4655757 Rhizobium leguminosarum bv. trifolii WSM1325 8015284 YP_002978303.1 CDS recX NC_012850.1 4655767 4656342 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 4655767..4656342 Rhizobium leguminosarum bv. trifolii WSM1325 8015940 YP_002978304.1 CDS Rleg_4527 NC_012850.1 4656415 4657326 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH00255 permease protein; hypothetical protein 4656415..4657326 Rhizobium leguminosarum bv. trifolii WSM1325 8015285 YP_002978305.1 CDS Rleg_4528 NC_012850.1 4657370 4657837 R KEGG: rec:RHECIAT_CH0000291 hypothetical protein; hypothetical protein complement(4657370..4657837) Rhizobium leguminosarum bv. trifolii WSM1325 8015286 YP_002978306.1 CDS Rleg_4529 NC_012850.1 4658064 4659047 D PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: ret:RHE_CH00257 hypothetical protein; rubrerythrin 4658064..4659047 Rhizobium leguminosarum bv. trifolii WSM1325 8015287 YP_002978307.1 CDS Rleg_4530 NC_012850.1 4659210 4659809 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rec:RHECIAT_CH0000293 transglutaminase-like cysteine peptidase protein; transglutaminase complement(4659210..4659809) Rhizobium leguminosarum bv. trifolii WSM1325 8015288 YP_002978308.1 CDS Rleg_4531 NC_012850.1 4659975 4660808 R KEGG: rec:RHECIAT_CH0000294 hydrolase protein; hydrolase protein complement(4659975..4660808) Rhizobium leguminosarum bv. trifolii WSM1325 8015941 YP_002978309.1 CDS infC NC_012850.1 4660908 4661522 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 4660908..4661522 Rhizobium leguminosarum bv. trifolii WSM1325 8015289 YP_002978310.1 CDS rpmI NC_012850.1 4661849 4662052 D TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: rpmI; ribosomal protein L35 ; K02916 large subunit ribosomal protein L35; 50S ribosomal protein L35 4661849..4662052 Rhizobium leguminosarum bv. trifolii WSM1325 8015290 YP_002978311.1 CDS rplT NC_012850.1 4662091 4662495 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 4662091..4662495 Rhizobium leguminosarum bv. trifolii WSM1325 8015291 YP_002978312.1 CDS pheS NC_012850.1 4662646 4663728 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 4662646..4663728 Rhizobium leguminosarum bv. trifolii WSM1325 8015292 YP_002978313.1 CDS pheT NC_012850.1 4663745 4666168 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 4663745..4666168 Rhizobium leguminosarum bv. trifolii WSM1325 8015293 YP_002978314.1 CDS Rleg_4537 NC_012850.1 4666222 4666581 R KEGG: rec:RHECIAT_CH0000301 hypothetical protein; hypothetical protein complement(4666222..4666581) Rhizobium leguminosarum bv. trifolii WSM1325 8015294 YP_002978315.1 CDS Rleg_4538 NC_012850.1 4666689 4667684 R PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0000302 probable oxidoreductase protein, aldo/keto reductase family; aldo/keto reductase complement(4666689..4667684) Rhizobium leguminosarum bv. trifolii WSM1325 8015295 YP_002978316.1 CDS Rleg_4539 NC_012850.1 4667887 4668795 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0000303 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 4667887..4668795 Rhizobium leguminosarum bv. trifolii WSM1325 8015296 YP_002978317.1 CDS Rleg_4540 NC_012850.1 4668832 4669329 R PFAM: protein of unknown function DUF892; KEGG: rec:RHECIAT_CH0000304 hypothetical protein; hypothetical protein complement(4668832..4669329) Rhizobium leguminosarum bv. trifolii WSM1325 8015297 YP_002978318.1 CDS Rleg_4541 NC_012850.1 4669479 4670129 D KEGG: ret:RHE_CH00269 hypothetical protein; hypothetical protein 4669479..4670129 Rhizobium leguminosarum bv. trifolii WSM1325 8015298 YP_002978319.1 CDS Rleg_4542 NC_012850.1 4670178 4670627 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH00270 acetyltransferase protein; N-acetyltransferase GCN5 complement(4670178..4670627) Rhizobium leguminosarum bv. trifolii WSM1325 8015299 YP_002978320.1 CDS Rleg_4543 NC_012850.1 4670642 4671589 R PFAM: aldo/keto reductase; KEGG: ret:RHE_CH00271 aldo/keto reductase family oxidoreductase; aldo/keto reductase complement(4670642..4671589) Rhizobium leguminosarum bv. trifolii WSM1325 8015300 YP_002978321.1 CDS Rleg_4544 NC_012850.1 4671768 4672754 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rec:RHECIAT_CH0000308 probable oxidoreductase protein; oxidoreductase domain-containing protein 4671768..4672754 Rhizobium leguminosarum bv. trifolii WSM1325 8015301 YP_002978322.1 CDS Rleg_4545 NC_012850.1 4672858 4673235 R PFAM: GtrA family protein; KEGG: ret:RHE_CH00273 hypothetical protein; GtrA family protein complement(4672858..4673235) Rhizobium leguminosarum bv. trifolii WSM1325 8015302 YP_002978323.1 CDS Rleg_4546 NC_012850.1 4673232 4674239 R PFAM: glycosyl transferase family 2; KEGG: rec:RHECIAT_CH0000310 probable glycosyltransferase protein; family 2 glycosyl transferase complement(4673232..4674239) Rhizobium leguminosarum bv. trifolii WSM1325 8015942 YP_002978324.1 CDS Rleg_4547 NC_012850.1 4674399 4676267 D KEGG: rec:RHECIAT_CH0000311 hypothetical protein; SNP /replace=G; hypothetical protein 4674399..4676267 Rhizobium leguminosarum bv. trifolii WSM1325 8015303 YP_002978325.1 CDS Rleg_4548 NC_012850.1 4676388 4676633 R KEGG: rec:RHECIAT_CH0000312 hypothetical protein; hypothetical protein complement(4676388..4676633) Rhizobium leguminosarum bv. trifolii WSM1325 8015304 YP_002978326.1 CDS xseA NC_012850.1 4676974 4678554 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 4676974..4678554 Rhizobium leguminosarum bv. trifolii WSM1325 8015305 YP_002978327.1 CDS Rleg_4550 NC_012850.1 4678557 4679150 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rec:RHECIAT_CH0000314 probable NAD(P)H dehydrogenase (quinone) protein; NAD(P)H dehydrogenase (quinone) 4678557..4679150 Rhizobium leguminosarum bv. trifolii WSM1325 8015306 YP_002978328.1 CDS Rleg_4551 NC_012850.1 4680148 4681401 R PFAM: peptidase M29 aminopeptidase II; KEGG: ret:RHE_CH00280 aminopeptidase protein; peptidase M29 aminopeptidase II complement(4680148..4681401) Rhizobium leguminosarum bv. trifolii WSM1325 8015943 YP_002978329.1 CDS Rleg_4552 NC_012850.1 4681528 4682211 R PFAM: glutathione S-transferase domain; KEGG: ret:RHE_CH00281 glutathione S-transferase protein; glutathione S-transferase domain protein complement(4681528..4682211) Rhizobium leguminosarum bv. trifolii WSM1325 8015307 YP_002978330.1 CDS Rleg_4553 NC_012850.1 4682292 4682735 D PFAM: regulatory protein MarR; KEGG: ret:RHE_CH00282 MarR family transcriptional regulator; MarR family transcriptional regulator 4682292..4682735 Rhizobium leguminosarum bv. trifolii WSM1325 8015308 YP_002978331.1 CDS Rleg_4554 NC_012850.1 4682799 4683272 R TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rec:RHECIAT_CH0000320 hypothetical protein; ybaK/ebsC protein complement(4682799..4683272) Rhizobium leguminosarum bv. trifolii WSM1325 8015309 YP_002978332.1 CDS Rleg_4555 NC_012850.1 4683305 4683655 R PFAM: arsenate reductase and related; KEGG: rec:RHECIAT_CH0000321 probable arsenate reductase protein; arsenate reductase complement(4683305..4683655) Rhizobium leguminosarum bv. trifolii WSM1325 8015310 YP_002978333.1 CDS Rleg_4556 NC_012850.1 4683775 4684836 R PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: ret:RHE_CH00285 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase complement(4683775..4684836) Rhizobium leguminosarum bv. trifolii WSM1325 8015311 YP_002978334.1 CDS Rleg_4557 NC_012850.1 4684938 4685537 R KEGG: pol:Bpro_2442 2',5' RNA ligase; SNP /replace=G; 2',5' RNA ligase complement(4684938..4685537) Rhizobium leguminosarum bv. trifolii WSM1325 8015312 YP_002978335.1 CDS Rleg_4558 NC_012850.1 4685820 4686383 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rec:RHECIAT_CH0000323 probable methylated-DNA-[protein]-cysteine S-methyltransferase protein; methylated-DNA--protein-cysteine methyltransferase 4685820..4686383 Rhizobium leguminosarum bv. trifolii WSM1325 8015313 YP_002978336.1 CDS Rleg_4559 NC_012850.1 4686496 4687230 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_CH0000324 short-chain dehydrogenase/oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(4686496..4687230) Rhizobium leguminosarum bv. trifolii WSM1325 8015314 YP_002978337.1 CDS Rleg_4560 NC_012850.1 4687269 4688111 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH00289 short chain dehydrogenase; short chain dehydrogenase complement(4687269..4688111) Rhizobium leguminosarum bv. trifolii WSM1325 8015315 YP_002978338.1 CDS Rleg_4561 NC_012850.1 4688177 4688548 R KEGG: ret:RHE_CH00290 hypothetical protein; hypothetical protein complement(4688177..4688548) Rhizobium leguminosarum bv. trifolii WSM1325 8015316 YP_002978339.1 CDS Rleg_4562 NC_012850.1 4688677 4689573 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0000327 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 4688677..4689573 Rhizobium leguminosarum bv. trifolii WSM1325 8015944 YP_002978340.1 CDS Rleg_4563 NC_012850.1 4689772 4690626 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_CH0000328 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator 4689772..4690626 Rhizobium leguminosarum bv. trifolii WSM1325 8015945 YP_002978341.1 CDS Rleg_4564 NC_012850.1 4690665 4691210 D PFAM: PEBP family protein; KEGG: ret:RHE_CH00293 phosphatidylethanolamine-binding protein; PEBP family protein 4690665..4691210 Rhizobium leguminosarum bv. trifolii WSM1325 8015317 YP_002978342.1 CDS Rleg_4565 NC_012850.1 4691318 4691788 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH00294 acetyltransferase protein; N-acetyltransferase GCN5 complement(4691318..4691788) Rhizobium leguminosarum bv. trifolii WSM1325 8015318 YP_002978343.1 CDS Rleg_4566 NC_012850.1 4692085 4692966 D PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:blr4000 transcriptional regulatory protein; AraC family transcriptional regulator 4692085..4692966 Rhizobium leguminosarum bv. trifolii WSM1325 8015319 YP_002978344.1 CDS Rleg_4567 NC_012850.1 4693179 4693709 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_CH0000331 riboflavin biosynthesis reductase protein; bifunctional deaminase-reductase domain-containing protein 4693179..4693709 Rhizobium leguminosarum bv. trifolii WSM1325 8015320 YP_002978345.1 CDS Rleg_4568 NC_012850.1 4693789 4694685 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator complement(4693789..4694685) Rhizobium leguminosarum bv. trifolii WSM1325 8015946 YP_002978346.1 CDS Rleg_4569 NC_012850.1 4694949 4695683 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr5278 glucose dehydrogenase; short-chain dehydrogenase/reductase SDR 4694949..4695683 Rhizobium leguminosarum bv. trifolii WSM1325 8015321 YP_002978347.1 CDS Rleg_4570 NC_012850.1 4695802 4696401 D PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: idhA; myo-inositol 2-dehydrogenase protein ; K06988; coenzyme F420-dependent NADP oxidoreductase 4695802..4696401 Rhizobium leguminosarum bv. trifolii WSM1325 8015322 YP_002978348.1 CDS guaA NC_012850.1 4696598 4698160 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(4696598..4698160) Rhizobium leguminosarum bv. trifolii WSM1325 8015323 YP_002978349.1 CDS Rleg_4572 NC_012850.1 4698253 4698891 R Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(4698253..4698891) Rhizobium leguminosarum bv. trifolii WSM1325 8015324 YP_002978350.1 CDS Rleg_4573 NC_012850.1 4698888 4699337 R PFAM: thioesterase superfamily protein; KEGG: rec:RHECIAT_CH0000336 phenylacetic acid degradation protein; thioesterase superfamily protein complement(4698888..4699337) Rhizobium leguminosarum bv. trifolii WSM1325 8015947 YP_002978351.1 CDS Rleg_4574 NC_012850.1 4699604 4700680 D KEGG: rec:RHECIAT_CH0000337 hypothetical protein; hypothetical protein 4699604..4700680 Rhizobium leguminosarum bv. trifolii WSM1325 8015325 YP_002978352.1 CDS Rleg_4575 NC_012850.1 4700697 4701776 R PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0000338 hypothetical protein; hypothetical protein complement(4700697..4701776) Rhizobium leguminosarum bv. trifolii WSM1325 8015326 YP_002978353.1 CDS Rleg_4576 NC_012850.1 4701781 4702881 R KEGG: rec:RHECIAT_CH0000339 hypothetical protein; hypothetical protein complement(4701781..4702881) Rhizobium leguminosarum bv. trifolii WSM1325 8015327 YP_002978354.1 CDS Rleg_4577 NC_012850.1 4702881 4704419 R PFAM: protein of unknown function DUF1111; KEGG: ret:RHE_CH00303 hypothetical protein; hypothetical protein complement(4702881..4704419) Rhizobium leguminosarum bv. trifolii WSM1325 8015328 YP_002978355.1 CDS Rleg_4578 NC_012850.1 4704467 4705741 R KEGG: rec:RHECIAT_CH0000341 hypothetical protein; hypothetical protein complement(4704467..4705741) Rhizobium leguminosarum bv. trifolii WSM1325 8015948 YP_002978356.1 CDS Rleg_4579 NC_012850.1 4706027 4707316 R PFAM: Fmu (Sun) domain protein; KEGG: rec:RHECIAT_CH0000342 tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein; Fmu (Sun) domain-containing protein complement(4706027..4707316) Rhizobium leguminosarum bv. trifolii WSM1325 8015949 YP_002978357.1 CDS Rleg_4580 NC_012850.1 4707461 4707823 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: rec:RHECIAT_CH0000343 probable rare lipoprotein A protein; rare lipoprotein A complement(4707461..4707823) Rhizobium leguminosarum bv. trifolii WSM1325 8015329 YP_002978358.1 CDS Rleg_4581 NC_012850.1 4708230 4709102 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_CH0000345 nucleoside-diphosphate-sugar epimerase protein; NAD-dependent epimerase/dehydratase complement(4708230..4709102) Rhizobium leguminosarum bv. trifolii WSM1325 8015330 YP_002978359.1 CDS Rleg_4582 NC_012850.1 4709102 4710259 R PFAM: hypothetical protein; HEAT domain containing protein; KEGG: rec:RHECIAT_CH0000346 iron-sulfur cluster binding protein; hypothetical protein complement(4709102..4710259) Rhizobium leguminosarum bv. trifolii WSM1325 8015331 YP_002978360.1 CDS Rleg_4583 NC_012850.1 4710272 4710964 R PFAM: glutathione S-transferase domain; KEGG: rec:RHECIAT_CH0000347 glutathione S-transferase protein; glutathione S-transferase domain protein complement(4710272..4710964) Rhizobium leguminosarum bv. trifolii WSM1325 8015332 YP_002978361.1 CDS Rleg_4584 NC_012850.1 4711197 4711994 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 4711197..4711994 Rhizobium leguminosarum bv. trifolii WSM1325 8015333 YP_002978362.1 CDS Rleg_4585 NC_012850.1 4712240 4712392 R KEGG: ret:RHE_CH00311 hypothetical protein; hypothetical protein complement(4712240..4712392) Rhizobium leguminosarum bv. trifolii WSM1325 8015334 YP_002978363.1 CDS Rleg_4586 NC_012850.1 4712678 4713658 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: ret:RHE_CH00312 NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein; NAD-dependent epimerase/dehydratase complement(4712678..4713658) Rhizobium leguminosarum bv. trifolii WSM1325 8015335 YP_002978364.1 CDS Rleg_4587 NC_012850.1 4713771 4714058 R PFAM: protein of unknown function DUF1330; KEGG: rec:RHECIAT_CH0000351 hypothetical protein; hypothetical protein complement(4713771..4714058) Rhizobium leguminosarum bv. trifolii WSM1325 8015336 YP_002978365.1 CDS Rleg_4588 NC_012850.1 4714088 4714795 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(4714088..4714795) Rhizobium leguminosarum bv. trifolii WSM1325 8015337 YP_002978366.1 CDS Rleg_4589 NC_012850.1 4714802 4715383 R PFAM: phosphoglycerate mutase; KEGG: rec:RHECIAT_CH0000353 phosphoglycerate mutase protein; phosphoglycerate mutase complement(4714802..4715383) Rhizobium leguminosarum bv. trifolii WSM1325 8015338 YP_002978367.1 CDS Rleg_4590 NC_012850.1 4715385 4715984 R KEGG: ret:RHE_CH00316 phosphatidylethanolamine N-methyltransferase/phosphatidyl-N-methylethanolaminen- methyltransfe r ase protein; phosphatidylethanolamine N-methyltransferase or phosphatidyl-N-methylethanolaminen-methyltransferase complement(4715385..4715984) Rhizobium leguminosarum bv. trifolii WSM1325 8015950 YP_002978368.1 CDS Rleg_4591 NC_012850.1 4716080 4716991 R PFAM: protein of unknown function DUF72; KEGG: rec:RHECIAT_CH0000355 hypothetical protein; hypothetical protein complement(4716080..4716991) Rhizobium leguminosarum bv. trifolii WSM1325 8015951 YP_002978369.1 CDS Rleg_4592 NC_012850.1 4717046 4718164 R binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta complement(4717046..4718164) Rhizobium leguminosarum bv. trifolii WSM1325 8015339 YP_002978370.1 CDS Rleg_4593 NC_012850.1 4718424 4719341 D PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rec:RHECIAT_CH0000357 methyltransferase protein; uroporphyrin-III C/tetrapyrrole methyltransferase 4718424..4719341 Rhizobium leguminosarum bv. trifolii WSM1325 8015340 YP_002978371.1 CDS Rleg_4594 NC_012850.1 4719331 4719699 D PFAM: protein of unknown function UPF0102; KEGG: rec:RHECIAT_CH0000358 hypothetical protein; hypothetical protein 4719331..4719699 Rhizobium leguminosarum bv. trifolii WSM1325 8015341 YP_002978372.1 CDS Rleg_4595 NC_012850.1 4719829 4720320 D PFAM: protein of unknown function DUF861 cupin_3; KEGG: rec:RHECIAT_CH0000359 hypothetical protein; hypothetical protein 4719829..4720320 Rhizobium leguminosarum bv. trifolii WSM1325 8015342 YP_002978373.1 CDS Rleg_4596 NC_012850.1 4720345 4721367 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: transcriptional regulator protein ; K02529 LacI family transcriptional regulator; LacI family transcriptional regulator complement(4720345..4721367) Rhizobium leguminosarum bv. trifolii WSM1325 8015343 YP_002978374.1 CDS Rleg_4597 NC_012850.1 4721702 4722688 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rec:RHECIAT_CH0000687 ribose ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 4721702..4722688 Rhizobium leguminosarum bv. trifolii WSM1325 8015344 YP_002978375.1 CDS Rleg_4598 NC_012850.1 4722869 4724389 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rbsAch1; ribose ABC transporter ; K10441 ribose transport system ATP-binding protein; ABC transporter 4722869..4724389 Rhizobium leguminosarum bv. trifolii WSM1325 8015345 YP_002978376.1 CDS Rleg_4599 NC_012850.1 4724373 4725395 D PFAM: inner-membrane translocator; KEGG: rbsCch1; ribose ABC transporter ; K10440 ribose transport system permease protein; inner-membrane translocator 4724373..4725395 Rhizobium leguminosarum bv. trifolii WSM1325 8015346 YP_002978377.1 CDS Rleg_4600 NC_012850.1 4725542 4726489 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4725542..4726489 Rhizobium leguminosarum bv. trifolii WSM1325 8015347 YP_002978378.1 CDS Rleg_4601 NC_012850.1 4726668 4728200 D KEGG: ret:RHE_CH00323 Mg-chelatase protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 4726668..4728200 Rhizobium leguminosarum bv. trifolii WSM1325 8015348 YP_002978379.1 CDS Rleg_4603 NC_012850.1 4728618 4729616 D KEGG: mes:Meso_2096 hypothetical protein; hypothetical protein 4728618..4729616 Rhizobium leguminosarum bv. trifolii WSM1325 8015350 YP_002978380.1 CDS Rleg_4605 NC_012850.1 4730004 4730966 R TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rec:RHECIAT_CH0000364 cysteine synthase protein; cysteine synthase A complement(4730004..4730966) Rhizobium leguminosarum bv. trifolii WSM1325 8015352 YP_002978381.1 CDS Rleg_4606 NC_012850.1 4731111 4731839 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0000365 probable amino acid efflux protein, LysE family; lysine exporter protein LysE/YggA complement(4731111..4731839) Rhizobium leguminosarum bv. trifolii WSM1325 8015353 YP_002978382.1 CDS Rleg_4607 NC_012850.1 4731961 4732479 D PFAM: ferritin Dps family protein; KEGG: azc:AZC_4121 low temperature-induced protein; ferritin Dps family protein 4731961..4732479 Rhizobium leguminosarum bv. trifolii WSM1325 8015354 YP_002978383.1 CDS Rleg_4608 NC_012850.1 4732527 4733429 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH00327 transporter permease protein; hypothetical protein complement(4732527..4733429) Rhizobium leguminosarum bv. trifolii WSM1325 8015355 YP_002978384.1 CDS Rleg_4609 NC_012850.1 4733541 4734005 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ret:RHE_CH00328 AsnC family transcriptional regulator; AsnC family transcriptional regulator 4733541..4734005 Rhizobium leguminosarum bv. trifolii WSM1325 8015356 YP_002978385.1 CDS Rleg_4610 NC_012850.1 4734012 4734911 R PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0000368 acetyltransferase protein; N-acetyltransferase GCN5 complement(4734012..4734911) Rhizobium leguminosarum bv. trifolii WSM1325 8015357 YP_002978386.1 CDS dut NC_012850.1 4734911 4735381 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(4734911..4735381) Rhizobium leguminosarum bv. trifolii WSM1325 8015358 YP_002978387.1 CDS Rleg_4612 NC_012850.1 4735473 4737056 D TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rec:RHECIAT_CH0000370 peptide chain release factor 3 protein; peptide chain release factor 3 4735473..4737056 Rhizobium leguminosarum bv. trifolii WSM1325 8015359 YP_002978388.1 CDS Rleg_4613 NC_012850.1 4737060 4737950 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sme:SMc01570 transcription regulator protein; LysR family transcriptional regulator complement(4737060..4737950) Rhizobium leguminosarum bv. trifolii WSM1325 8015360 YP_002978389.1 CDS Rleg_4614 NC_012850.1 4738065 4738772 D PFAM: glutathione S-transferase domain; KEGG: sml:Smlt1073 glutathione S-transferase; glutathione S-transferase domain protein 4738065..4738772 Rhizobium leguminosarum bv. trifolii WSM1325 8015361 YP_002978390.1 CDS Rleg_4615 NC_012850.1 4738818 4739204 R PFAM: endoribonuclease L-PSP; KEGG: sme:SM_b20118 hypothetical protein; endoribonuclease L-PSP complement(4738818..4739204) Rhizobium leguminosarum bv. trifolii WSM1325 8015362 YP_002978391.1 CDS Rleg_4616 NC_012850.1 4739286 4739813 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: mlo:mlr7283 transcriptional regulator; AsnC family transcriptional regulator 4739286..4739813 Rhizobium leguminosarum bv. trifolii WSM1325 8015363 YP_002978392.1 CDS Rleg_4617 NC_012850.1 4739906 4740397 D PFAM: protein of unknown function UPF0066; KEGG: hypothetical protein; hypothetical protein 4739906..4740397 Rhizobium leguminosarum bv. trifolii WSM1325 8015364 YP_002978393.1 CDS Rleg_4618 NC_012850.1 4740499 4740900 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH00337 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(4740499..4740900) Rhizobium leguminosarum bv. trifolii WSM1325 8015952 YP_002978394.1 CDS Rleg_4619 NC_012850.1 4740968 4742503 R PFAM: peptidase S10 serine carboxypeptidase; KEGG: rec:RHECIAT_CH0000375 carboxypeptidase-related protein; peptidase S10 serine carboxypeptidase complement(4740968..4742503) Rhizobium leguminosarum bv. trifolii WSM1325 8015365 YP_002978395.1 CDS Rleg_4620 NC_012850.1 4742604 4743896 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0000376 probable cyanate transporter protein; major facilitator superfamily protein complement(4742604..4743896) Rhizobium leguminosarum bv. trifolii WSM1325 8015366 YP_002978396.1 CDS Rleg_4621 NC_012850.1 4743893 4744570 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0000377 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator complement(4743893..4744570) Rhizobium leguminosarum bv. trifolii WSM1325 8015367 YP_002978397.1 CDS Rleg_4622 NC_012850.1 4744886 4745797 R PFAM: Pirin domain protein; KEGG: pirin protein ; K06911; pirin complement(4744886..4745797) Rhizobium leguminosarum bv. trifolii WSM1325 8015368 YP_002978398.1 CDS Rleg_4623 NC_012850.1 4746054 4746866 D PFAM: glutamine amidotransferase class-II; KEGG: ret:RHE_CH00341 glutamine amidotransferase protein; glutamine amidotransferase 4746054..4746866 Rhizobium leguminosarum bv. trifolii WSM1325 8015369 YP_002978399.1 CDS Rleg_4624 NC_012850.1 4746877 4748082 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(4746877..4748082) Rhizobium leguminosarum bv. trifolii WSM1325 8015370 YP_002978400.1 CDS Rleg_4625 NC_012850.1 4748223 4748972 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PF00142 short chain dehydrogenase; short chain dehydrogenase complement(4748223..4748972) Rhizobium leguminosarum bv. trifolii WSM1325 8015371 YP_002978401.1 CDS Rleg_4626 NC_012850.1 4749108 4749872 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH00343 short chain dehydrogenase; short chain dehydrogenase complement(4749108..4749872) Rhizobium leguminosarum bv. trifolii WSM1325 8015372 YP_002978402.1 CDS Rleg_4627 NC_012850.1 4749999 4750904 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0000381 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 4749999..4750904 Rhizobium leguminosarum bv. trifolii WSM1325 8015373 YP_002978403.1 CDS Rleg_4628 NC_012850.1 4750906 4751784 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator complement(4750906..4751784) Rhizobium leguminosarum bv. trifolii WSM1325 8015374 YP_002978404.1 CDS Rleg_4629 NC_012850.1 4751875 4753374 D PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0000382 transporter permease protein; major facilitator superfamily protein 4751875..4753374 Rhizobium leguminosarum bv. trifolii WSM1325 8015375 YP_002978405.1 CDS Rleg_4630 NC_012850.1 4753642 4753860 R KEGG: SpoVT/AbrB-like protein; SpoVT/AbrB-like protein complement(4753642..4753860) Rhizobium leguminosarum bv. trifolii WSM1325 8015953 YP_002978406.1 CDS Rleg_4631 NC_012850.1 4753908 4755569 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(4753908..4755569) Rhizobium leguminosarum bv. trifolii WSM1325 8015954 YP_002978407.1 CDS Rleg_4632 NC_012850.1 4755638 4755967 R KEGG: ret:RHE_CH00348 hypothetical protein; hypothetical protein complement(4755638..4755967) Rhizobium leguminosarum bv. trifolii WSM1325 8015376 YP_002978408.1 CDS Rleg_4633 NC_012850.1 4755971 4757068 R PFAM: protein of unknown function DUF917; KEGG: rec:RHECIAT_CH0000387 hypothetical protein; hypothetical protein complement(4755971..4757068) Rhizobium leguminosarum bv. trifolii WSM1325 8015377 YP_002978409.1 CDS Rleg_4634 NC_012850.1 4757049 4758329 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(4757049..4758329) Rhizobium leguminosarum bv. trifolii WSM1325 8015378 YP_002978410.1 CDS Rleg_4635 NC_012850.1 4758326 4759705 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rec:RHECIAT_CH0000389 allantoinase protein; Allantoinase complement(4758326..4759705) Rhizobium leguminosarum bv. trifolii WSM1325 8015379 YP_002978411.1 CDS Rleg_4636 NC_012850.1 4759730 4761313 R PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rec:RHECIAT_CH0000390 histidine ammonia-lyase protein; phenylalanine/histidine ammonia-lyase complement(4759730..4761313) Rhizobium leguminosarum bv. trifolii WSM1325 8015955 YP_002978412.1 CDS Rleg_4637 NC_012850.1 4761506 4763080 R TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: rec:RHECIAT_CH0000391 ubiquinone biosynthesis protein; 2-polyprenylphenol 6-hydroxylase complement(4761506..4763080) Rhizobium leguminosarum bv. trifolii WSM1325 8015956 YP_002978413.1 CDS ubiE NC_012850.1 4763143 4763919 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(4763143..4763919) Rhizobium leguminosarum bv. trifolii WSM1325 8015380 YP_002978414.1 CDS Rleg_4639 NC_012850.1 4764069 4764959 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4764069..4764959 Rhizobium leguminosarum bv. trifolii WSM1325 8015381 YP_002978415.1 CDS Rleg_4640 NC_012850.1 4764998 4765771 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4764998..4765771 Rhizobium leguminosarum bv. trifolii WSM1325 8015382 YP_002978416.1 CDS rpsT NC_012850.1 4765964 4766242 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4765964..4766242 Rhizobium leguminosarum bv. trifolii WSM1325 8015383 YP_002978484.1 CDS Rleg_5972 NC_012852.1 82 1095 D KEGG: rbsB; ABC transporter substrate binding protein (ribose); rbsB; ABC transporter substrate binding protein (ribose) 82..1095 Rhizobium leguminosarum bv. trifolii WSM1325 8016167 YP_002978485.1 CDS Rleg_5973 NC_012852.1 1161 2711 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sugar ABC transporter; ABC transporter 1161..2711 Rhizobium leguminosarum bv. trifolii WSM1325 8016331 YP_002978486.1 CDS Rleg_5974 NC_012852.1 2701 3720 D PFAM: inner-membrane translocator; KEGG: sugar ABC transporter; inner-membrane translocator 2701..3720 Rhizobium leguminosarum bv. trifolii WSM1325 8016332 YP_002978487.1 CDS Rleg_5975 NC_012852.1 3723 4721 D PFAM: inner-membrane translocator; KEGG: ribose ABC transporter; inner-membrane translocator 3723..4721 Rhizobium leguminosarum bv. trifolii WSM1325 8016333 YP_002978488.1 CDS Rleg_5976 NC_012852.1 4737 6239 R TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: rec:RHECIAT_PC0000325 glycerol kinase protein; glycerol kinase complement(4737..6239) Rhizobium leguminosarum bv. trifolii WSM1325 8016334 YP_002978489.1 CDS Rleg_5977 NC_012852.1 6387 8111 R KEGG: rec:RHECIAT_PC0000326 putative sugar ABC transporter, substrate-binding protein; putative sugar ABC transporter, substrate-binding protein complement(6387..8111) Rhizobium leguminosarum bv. trifolii WSM1325 8016335 YP_002978490.1 CDS Rleg_5978 NC_012852.1 8192 8488 R KEGG: rec:RHECIAT_PC0000327 hypothetical conserved membrane protein; conserved hypothetical conserved membrane protein complement(8192..8488) Rhizobium leguminosarum bv. trifolii WSM1325 8016336 YP_002978491.1 CDS Rleg_5979 NC_012852.1 8488 9399 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000328 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(8488..9399) Rhizobium leguminosarum bv. trifolii WSM1325 8016337 YP_002978492.1 CDS Rleg_5980 NC_012852.1 9401 10267 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000329 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(9401..10267) Rhizobium leguminosarum bv. trifolii WSM1325 8016338 YP_002978493.1 CDS Rleg_5981 NC_012852.1 10270 11340 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000330 probable sugar ABC transporter, ATP-binding protein; ABC transporter complement(10270..11340) Rhizobium leguminosarum bv. trifolii WSM1325 8016339 YP_002978494.1 CDS Rleg_5982 NC_012852.1 11350 12429 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000331 probable sugar ABC transporter, ATP-binding protein; ABC transporter complement(11350..12429) Rhizobium leguminosarum bv. trifolii WSM1325 8016340 YP_002978495.1 CDS glpD NC_012852.1 12471 13985 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(12471..13985) Rhizobium leguminosarum bv. trifolii WSM1325 8016341 YP_002978496.1 CDS Rleg_5984 NC_012852.1 14105 14878 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: rec:RHECIAT_PC0000333 probable transcriptional regulator protein, DeoR family; transcriptional regulator, DeoR family complement(14105..14878) Rhizobium leguminosarum bv. trifolii WSM1325 8016250 YP_002978497.1 CDS Rleg_5985 NC_012852.1 14977 15882 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_PB00017 hypothetical protein; hypothetical protein complement(14977..15882) Rhizobium leguminosarum bv. trifolii WSM1325 8016251 YP_002978498.1 CDS Rleg_5986 NC_012852.1 15967 16896 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PB00016 LysR family transcriptional regulator; LysR family transcriptional regulator 15967..16896 Rhizobium leguminosarum bv. trifolii WSM1325 8016252 YP_002978499.1 CDS Rleg_5987 NC_012852.1 16935 17405 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_PB00015 putative acetyltransferase protein; GCN5-related N-acetyltransferase complement(16935..17405) Rhizobium leguminosarum bv. trifolii WSM1325 8016253 YP_002978500.1 CDS Rleg_5988 NC_012852.1 17503 18024 R PFAM: protein of unknown function DUF992; KEGG: ret:RHE_PB00014 hypothetical protein; hypothetical protein complement(17503..18024) Rhizobium leguminosarum bv. trifolii WSM1325 8016254 YP_002978501.1 CDS Rleg_5989 NC_012852.1 18615 18863 D PFAM: 17 kDa surface antigen; KEGG: smd:Smed_1985 17 kDa surface antigen; 17 kDa surface antigen 18615..18863 Rhizobium leguminosarum bv. trifolii WSM1325 8016255 YP_002978502.1 CDS Rleg_5990 NC_012852.1 18884 19243 D KEGG: sme:SMc01489 putative signal peptide protein; putative signal peptide protein 18884..19243 Rhizobium leguminosarum bv. trifolii WSM1325 8016256 YP_002978503.1 CDS Rleg_5991 NC_012852.1 19326 19490 R PFAM: protein of unknown function DUF1328; KEGG: smd:Smed_0341 protein of unknown function DUF1328; hypothetical protein complement(19326..19490) Rhizobium leguminosarum bv. trifolii WSM1325 8016257 YP_002978504.1 CDS Rleg_5992 NC_012852.1 19590 20180 R KEGG: rec:RHECIAT_PC0000337 hypothetical protein; hypothetical protein complement(19590..20180) Rhizobium leguminosarum bv. trifolii WSM1325 8016258 YP_002978505.1 CDS Rleg_5993 NC_012852.1 20273 20659 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase ; K07032; Glyoxalase/bleomycin resistance protein/dioxygenase complement(20273..20659) Rhizobium leguminosarum bv. trifolii WSM1325 8016259 YP_002978506.1 CDS Rleg_5994 NC_012852.1 20766 22388 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PB00012 ABC transporter ATP-binding protein; ABC transporter complement(20766..22388) Rhizobium leguminosarum bv. trifolii WSM1325 8016260 YP_002978507.1 CDS Rleg_5995 NC_012852.1 22593 22922 D KEGG: ret:RHE_PB00011 hypothetical protein; hypothetical protein 22593..22922 Rhizobium leguminosarum bv. trifolii WSM1325 8016261 YP_002978508.1 CDS Rleg_5996 NC_012852.1 23027 23896 D PFAM: Aldose 1-epimerase; KEGG: ret:RHE_PB00010 putative aldose 1-epimerase protein; Aldose 1-epimerase 23027..23896 Rhizobium leguminosarum bv. trifolii WSM1325 8016262 YP_002978509.1 CDS Rleg_5997 NC_012852.1 23945 25534 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_PC0000341 multidrug efflux transporter protein; drug resistance transporter, EmrB/QacA subfamily complement(23945..25534) Rhizobium leguminosarum bv. trifolii WSM1325 8016263 YP_002978510.1 CDS Rleg_5998 NC_012852.1 25560 26744 R PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_PC0000342 multidrug efflux transporter protein; secretion protein HlyD family protein complement(25560..26744) Rhizobium leguminosarum bv. trifolii WSM1325 8016264 YP_002978511.1 CDS Rleg_5999 NC_012852.1 26877 27524 D PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_PC0000343 multidrug efflux transcriptional regulator protein, TetR family; TetR family transcriptional regulator 26877..27524 Rhizobium leguminosarum bv. trifolii WSM1325 8016265 YP_002978512.1 CDS Rleg_6000 NC_012852.1 27777 28964 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(27777..28964) Rhizobium leguminosarum bv. trifolii WSM1325 8016266 YP_002978513.1 CDS Rleg_6001 NC_012852.1 29007 29729 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PB00005 GntR family transcriptional regulator; GntR family transcriptional regulator complement(29007..29729) Rhizobium leguminosarum bv. trifolii WSM1325 8016267 YP_002978514.1 CDS Rleg_6002 NC_012852.1 30003 30407 D KEGG: ret:RHE_PB00004 hypothetical protein; hypothetical protein 30003..30407 Rhizobium leguminosarum bv. trifolii WSM1325 8016268 YP_002978515.1 CDS Rleg_6003 NC_012852.1 30464 30715 D KEGG: rec:RHECIAT_PC0000347 hypothetical protein; hypothetical protein 30464..30715 Rhizobium leguminosarum bv. trifolii WSM1325 8016269 YP_002978516.1 CDS Rleg_6004 NC_012852.1 31041 32315 D PFAM: O-antigen polymerase; KEGG: rec:RHECIAT_PC0000348 putative O-antigen ligase protein; O-antigen polymerase 31041..32315 Rhizobium leguminosarum bv. trifolii WSM1325 8016270 YP_002978517.1 CDS Rleg_6005 NC_012852.1 32344 34311 R PFAM: polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_PC0000349 dTDP-glucose 4,6-dehydratase protein; polysaccharide biosynthesis protein CapD complement(32344..34311) Rhizobium leguminosarum bv. trifolii WSM1325 8016271 YP_002978518.1 CDS Rleg_6006 NC_012852.1 34483 35142 R PFAM: sugar transferase; KEGG: rec:RHECIAT_PC0000350 galactosyltransferase protein; sugar transferase complement(34483..35142) Rhizobium leguminosarum bv. trifolii WSM1325 8016272 YP_002978519.1 CDS Rleg_6007 NC_012852.1 35770 36015 D KEGG: rec:RHECIAT_CH0003150 hypothetical protein; hypothetical protein 35770..36015 Rhizobium leguminosarum bv. trifolii WSM1325 8016273 YP_002978520.1 CDS Rleg_6009 NC_012852.1 36492 37256 R PFAM: protein of unknown function DUF1355; KEGG: psb:Psyr_0772 hypothetical protein; hypothetical protein complement(36492..37256) Rhizobium leguminosarum bv. trifolii WSM1325 8016158 YP_002978521.1 CDS Rleg_6010 NC_012852.1 37324 38328 R KEGG: bph:Bphy_3460 rhamnose ABC transporter, periplasmic rhamnose-binding protein; rhamnose ABC transporter, periplasmic rhamnose-binding protein complement(37324..38328) Rhizobium leguminosarum bv. trifolii WSM1325 8016275 YP_002978522.1 CDS Rleg_6011 NC_012852.1 38380 39390 R PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_5682 monosaccharide-transporting ATPase; inner-membrane translocator complement(38380..39390) Rhizobium leguminosarum bv. trifolii WSM1325 8016276 YP_002978523.1 CDS Rleg_6012 NC_012852.1 39390 41975 R PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: jan:Jann_2595 ABC transporter related; ABC transporter complement(39390..41975) Rhizobium leguminosarum bv. trifolii WSM1325 8016277 YP_002978524.1 CDS Rleg_6013 NC_012852.1 42259 43491 D PFAM: ROK family protein; KEGG: bvi:Bcep1808_1509 ROK family protein; ROK family protein 42259..43491 Rhizobium leguminosarum bv. trifolii WSM1325 8016278 YP_002978525.1 CDS Rleg_6014 NC_012852.1 44052 44291 R TIGRFAM: ribosomal protein S21; KEGG: rpsU; ribosomal protein S21; ribosomal protein S21 complement(44052..44291) Rhizobium leguminosarum bv. trifolii WSM1325 8016279 YP_002978526.1 CDS Rleg_6015 NC_012852.1 44687 45292 D PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: molecular chaperone DnaJ family; heat shock protein DnaJ domain protein 44687..45292 Rhizobium leguminosarum bv. trifolii WSM1325 8016280 YP_002978527.1 CDS Rleg_6016 NC_012852.1 45368 45586 R KEGG: smd:Smed_6375 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(45368..45586) Rhizobium leguminosarum bv. trifolii WSM1325 8016281 YP_002978528.1 CDS Rleg_6017 NC_012852.1 45725 46795 R KEGG: atc:AGR_pAT_667 hypothetical protein; hypothetical protein complement(45725..46795) Rhizobium leguminosarum bv. trifolii WSM1325 8016282 YP_002978529.1 CDS Rleg_6018 NC_012852.1 46785 49187 R PFAM: protein of unknown function DUF214; KEGG: atc:AGR_pAT_665 putative ABC transporter permease protein; hypothetical protein complement(46785..49187) Rhizobium leguminosarum bv. trifolii WSM1325 8016283 YP_002978530.1 CDS Rleg_6019 NC_012852.1 49184 49843 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_pAT_191 AttE-like ABC transporter, ATP binding protein; ABC transporter complement(49184..49843) Rhizobium leguminosarum bv. trifolii WSM1325 8016284 YP_002978531.1 CDS Rleg_6022 NC_012852.1 51017 51490 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: ret:RHE_PE00161 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase complement(51017..51490) Rhizobium leguminosarum bv. trifolii WSM1325 8016160 YP_002978532.1 CDS Rleg_6023 NC_012852.1 52029 52595 R KEGG: rec:RHECIAT_PB0000304 hypothetical protein; hypothetical protein complement(52029..52595) Rhizobium leguminosarum bv. trifolii WSM1325 8016286 YP_002978533.1 CDS Rleg_6024 NC_012852.1 52727 53389 R KEGG: ret:RHE_PD00012 hypothetical protein; hypothetical protein complement(52727..53389) Rhizobium leguminosarum bv. trifolii WSM1325 8016287 YP_002978534.1 CDS Rleg_6025 NC_012852.1 53790 55682 R molecular chaperone; heat shock protein 90 complement(53790..55682) Rhizobium leguminosarum bv. trifolii WSM1325 8016288 YP_002978535.1 CDS Rleg_6027 NC_012852.1 57030 57653 R PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: selA; L-seryl-tRNA(ser) selenium transferase protein ; K07141; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase complement(57030..57653) Rhizobium leguminosarum bv. trifolii WSM1325 8016161 YP_002978536.1 CDS Rleg_6028 NC_012852.1 57796 58491 R KEGG: hypothetical protein ; K07402 xanthine dehydrogenase accessory factor; hypothetical protein complement(57796..58491) Rhizobium leguminosarum bv. trifolii WSM1325 8016290 YP_002978537.1 CDS Rleg_6029 NC_012852.1 58491 58820 R PFAM: protein of unknown function DUF182; KEGG: smd:Smed_1483 protein of unknown function DUF182; hypothetical protein complement(58491..58820) Rhizobium leguminosarum bv. trifolii WSM1325 8016291 YP_002978538.1 CDS Rleg_6030 NC_012852.1 58837 61179 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: bglSf; beta-glucosidase protein; glycoside hydrolase family 3 domain protein complement(58837..61179) Rhizobium leguminosarum bv. trifolii WSM1325 8016292 YP_002978539.1 CDS Rleg_6031 NC_012852.1 61213 61692 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: transcriptional regulator protein; transcriptional regulator, MarR family complement(61213..61692) Rhizobium leguminosarum bv. trifolii WSM1325 8016293 YP_002978540.1 CDS Rleg_6032 NC_012852.1 61748 62263 R KEGG: bid:Bind_2986 isochorismatase hydrolase; isochorismatase hydrolase complement(61748..62263) Rhizobium leguminosarum bv. trifolii WSM1325 8016294 YP_002978541.1 CDS Rleg_6033 NC_012852.1 62263 63312 R KEGG: mlo:mll1738 ATP-binding protein of polyamine ABC transporter; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(62263..63312) Rhizobium leguminosarum bv. trifolii WSM1325 8016295 YP_002978542.1 CDS Rleg_6034 NC_012852.1 63299 64078 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1739 permease protein of polyamine ABC transporter; binding-protein-dependent transport systems inner membrane component complement(63299..64078) Rhizobium leguminosarum bv. trifolii WSM1325 8016296 YP_002978543.1 CDS Rleg_6035 NC_012852.1 64089 65003 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1740 permease protein of polyamine ABC transporter; binding-protein-dependent transport systems inner membrane component complement(64089..65003) Rhizobium leguminosarum bv. trifolii WSM1325 8016297 YP_002978544.1 CDS Rleg_6036 NC_012852.1 64993 66069 R PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll1741 periplasmic spermidine/putrescine-binding protein or ABC transporter; extracellular solute-binding protein family 1 complement(64993..66069) Rhizobium leguminosarum bv. trifolii WSM1325 8016298 YP_002978545.1 CDS Rleg_6037 NC_012852.1 66435 68672 R PFAM: glycoside hydrolase family 37; KEGG: saz:Sama_3625 cell wall surface anchor family protein; glycoside hydrolase family 37 complement(66435..68672) Rhizobium leguminosarum bv. trifolii WSM1325 8016299 YP_002978546.1 CDS Rleg_6038 NC_012852.1 68690 71377 R KEGG: ect:ECIAI39_4377 hypothetical protein, putative carbohydrate binding domain; carbohydrate-binding protein complement(68690..71377) Rhizobium leguminosarum bv. trifolii WSM1325 8016300 YP_002978547.1 CDS Rleg_6039 NC_012852.1 71389 74928 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; cytochrome c class I; KEGG: cytochrome-c oxidase protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding complement(71389..74928) Rhizobium leguminosarum bv. trifolii WSM1325 8016301 YP_002978548.1 CDS Rleg_6040 NC_012852.1 74925 75449 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: xdhA; xanthine dehydrogenase protein; (2Fe-2S)-binding domain protein complement(74925..75449) Rhizobium leguminosarum bv. trifolii WSM1325 8016302 YP_002978549.1 CDS Rleg_6041 NC_012852.1 75446 75571 R hypothetical protein complement(75446..75571) Rhizobium leguminosarum bv. trifolii WSM1325 8016303 YP_002978550.1 CDS Rleg_6042 NC_012852.1 75802 76938 D PFAM: monooxygenase FAD-binding; KEGG: spe:Spro_2311 monooxygenase FAD-binding; monooxygenase FAD-binding 75802..76938 Rhizobium leguminosarum bv. trifolii WSM1325 8016304 YP_002978551.1 CDS Rleg_6043 NC_012852.1 76935 77732 D PFAM: alpha/beta hydrolase fold; KEGG: ppw:PputW619_2141 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 76935..77732 Rhizobium leguminosarum bv. trifolii WSM1325 8016305 YP_002978552.1 CDS Rleg_6044 NC_012852.1 77822 78574 D PFAM: Asp/Glu/hydantoin racemase; KEGG: ppg:PputGB1_3577 Asp/Glu/hydantoin racemase; Asp/Glu/hydantoin racemase 77822..78574 Rhizobium leguminosarum bv. trifolii WSM1325 8016306 YP_002978553.1 CDS Rleg_6045 NC_012852.1 78633 79274 D PFAM: isochorismatase hydrolase; KEGG: ppf:Pput_1896 isochorismatase hydrolase; N-carbamoylsarcosine amidase 78633..79274 Rhizobium leguminosarum bv. trifolii WSM1325 8016307 YP_002978554.1 CDS Rleg_6046 NC_012852.1 79320 80354 D KEGG: ppf:Pput_1892 hypothetical protein; hypothetical protein 79320..80354 Rhizobium leguminosarum bv. trifolii WSM1325 8016308 YP_002978555.1 CDS Rleg_6047 NC_012852.1 80483 80965 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: transcriptional regulator protein; transcriptional regulator, MarR family 80483..80965 Rhizobium leguminosarum bv. trifolii WSM1325 8016309 YP_002978556.1 CDS Rleg_6048 NC_012852.1 81260 81424 D hypothetical protein 81260..81424 Rhizobium leguminosarum bv. trifolii WSM1325 8016310 YP_002978557.1 CDS Rleg_6049 NC_012852.1 81501 81635 D hypothetical protein 81501..81635 Rhizobium leguminosarum bv. trifolii WSM1325 8016311 YP_002978558.1 CDS Rleg_6050 NC_012852.1 82003 83262 R PFAM: major facilitator superfamily MFS_1; KEGG: mno:Mnod_6367 major facilitator superfamily MFS_1; major facilitator superfamily MFS_1 complement(82003..83262) Rhizobium leguminosarum bv. trifolii WSM1325 8016312 YP_002978559.1 CDS Rleg_6051 NC_012852.1 84244 85383 D PFAM: sodium/calcium exchanger membrane region; KEGG: msl:Msil_3452 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 84244..85383 Rhizobium leguminosarum bv. trifolii WSM1325 8016313 YP_002978560.1 CDS Rleg_6052 NC_012852.1 86028 87332 R PFAM: replication protein C; KEGG: ret:RHE_PF00212 plasmid replication protein RepCf2; replication initiation protein RepC complement(86028..87332) Rhizobium leguminosarum bv. trifolii WSM1325 8016314 YP_002978561.1 CDS Rleg_6053 NC_012852.1 87487 88467 R KEGG: oan:Oant_4455 ParB-like partition protein; TIGRFAM: plasmid partitioning protein RepB; parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; SMART: ParB domain protein nuclease; plasmid partitioning protein RepB complement(87487..88467) Rhizobium leguminosarum bv. trifolii WSM1325 8016315 YP_002978562.1 CDS Rleg_6054 NC_012852.1 88543 89739 R TIGRFAM: plasmid partitioning protein RepA; PFAM: Cobyrinic acid ac-diamide synthase; regulatory protein MerR; KEGG: mlo:mll9654 replication protein A; plasmid partitioning protein RepA complement(88543..89739) Rhizobium leguminosarum bv. trifolii WSM1325 8016316 YP_002978563.1 CDS Rleg_6055 NC_012852.1 90194 90715 D KEGG: similar to collagen type IV alpha 4 chain; hypothetical protein 90194..90715 Rhizobium leguminosarum bv. trifolii WSM1325 8016317 YP_002978564.1 CDS Rleg_6056 NC_012852.1 90718 90993 R hypothetical protein complement(90718..90993) Rhizobium leguminosarum bv. trifolii WSM1325 8016318 YP_002978565.1 CDS Rleg_6057 NC_012852.1 91340 91534 R hypothetical protein complement(91340..91534) Rhizobium leguminosarum bv. trifolii WSM1325 8016319 YP_002978566.1 CDS Rleg_6058 NC_012852.1 91663 93756 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: atc:AGR_L_203 hybrid histidine protein kinase-phosphate acceptor regulatory protein; histidine kinase complement(91663..93756) Rhizobium leguminosarum bv. trifolii WSM1325 8016320 YP_002978567.1 CDS Rleg_6059 NC_012852.1 93753 94493 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: atc:AGR_L_201 hypothetical protein; two component transcriptional regulator, winged helix family complement(93753..94493) Rhizobium leguminosarum bv. trifolii WSM1325 8016321 YP_002978568.1 CDS Rleg_6060 NC_012852.1 94709 95731 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0002179 iron(III) ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 94709..95731 Rhizobium leguminosarum bv. trifolii WSM1325 8016322 YP_002978569.1 CDS Rleg_6061 NC_012852.1 95850 96878 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0002178 iron(III) ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 95850..96878 Rhizobium leguminosarum bv. trifolii WSM1325 8016323 YP_002978570.1 CDS Rleg_6062 NC_012852.1 96947 99169 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002177 iron(III) ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 96947..99169 Rhizobium leguminosarum bv. trifolii WSM1325 8016324 YP_002978571.1 CDS Rleg_6063 NC_012852.1 99166 100227 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002176 iron(III) ABC transporter, ATP-binding protein; ABC transporter 99166..100227 Rhizobium leguminosarum bv. trifolii WSM1325 8016325 YP_002978572.1 CDS Rleg_6064 NC_012852.1 100343 100990 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI2021 putative hydrolase protein; HAD-superfamily hydrolase, subfamily IA, variant 3 100343..100990 Rhizobium leguminosarum bv. trifolii WSM1325 8016326 YP_002978573.1 CDS Rleg_6065 NC_012852.1 101088 102095 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: transcriptional regulator protein; transcriptional regulator, LacI family 101088..102095 Rhizobium leguminosarum bv. trifolii WSM1325 8016327 YP_002978574.1 CDS Rleg_6066 NC_012852.1 102163 102690 D PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH02122 MutT/NUDIX family hydrolase; NUDIX hydrolase 102163..102690 Rhizobium leguminosarum bv. trifolii WSM1325 8016328 YP_002978575.1 CDS Rleg_6067 NC_012852.1 102844 103425 D PFAM: NUDIX hydrolase; KEGG: vpa:VPA0218 hypothetical protein; NUDIX hydrolase 102844..103425 Rhizobium leguminosarum bv. trifolii WSM1325 8016329 YP_002978576.1 CDS Rleg_6068 NC_012852.1 103514 104641 D PFAM: protein of unknown function UPF0052 and CofD; KEGG: lch:Lcho_4051 protein of unknown function UPF0052 and CofD; hypothetical protein 103514..104641 Rhizobium leguminosarum bv. trifolii WSM1325 8016330 YP_002978577.1 CDS Rleg_6069 NC_012852.1 104634 105266 D KEGG: bsu:BSU00500 UDP-N-acetylglucosamine pyrophosphorylase; hypothetical protein 104634..105266 Rhizobium leguminosarum bv. trifolii WSM1325 8016027 YP_002978578.1 CDS Rleg_6070 NC_012852.1 105460 106311 D PFAM: inositol monophosphatase; KEGG: sme:SM_b20150 putative inositol monophosphatase protein; inositol monophosphatase 105460..106311 Rhizobium leguminosarum bv. trifolii WSM1325 8016028 YP_002978579.1 CDS Rleg_6071 NC_012852.1 106365 106973 D KEGG: sme:SM_b20151 hypothetical protein; hypothetical protein 106365..106973 Rhizobium leguminosarum bv. trifolii WSM1325 8016030 YP_002978580.1 CDS Rleg_6074 NC_012852.1 109239 109457 D KEGG: smd:Smed_6375 transcriptional regulator, XRE family; XRE family transcriptional regulator 109239..109457 Rhizobium leguminosarum bv. trifolii WSM1325 8016163 YP_002978581.1 CDS Rleg_6075 NC_012852.1 109533 110141 R PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: molecular chaperone DnaJ family; heat shock protein DnaJ domain protein complement(109533..110141) Rhizobium leguminosarum bv. trifolii WSM1325 8016032 YP_002978582.1 CDS Rleg_6076 NC_012852.1 110474 110740 R PFAM: protein of unknown function DUF982; KEGG: ret:RHE_CH01582 hypothetical protein; hypothetical protein complement(110474..110740) Rhizobium leguminosarum bv. trifolii WSM1325 8016033 YP_002978583.1 CDS Rleg_6077 NC_012852.1 111081 111884 R KEGG: mno:Mnod_4786 beta-lactamase domain protein; beta-lactamase domain protein complement(111081..111884) Rhizobium leguminosarum bv. trifolii WSM1325 8016034 YP_002978584.1 CDS Rleg_6078 NC_012852.1 112308 113405 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(112308..113405) Rhizobium leguminosarum bv. trifolii WSM1325 8016035 YP_002978585.1 CDS Rleg_6079 NC_012852.1 113829 114197 D KEGG: ret:RHE_PF00150 hypothetical protein; hypothetical protein 113829..114197 Rhizobium leguminosarum bv. trifolii WSM1325 8016036 YP_002978586.1 CDS Rleg_6080 NC_012852.1 114489 115121 R KEGG: sme:SMc01547 hypothetical protein; hypothetical protein complement(114489..115121) Rhizobium leguminosarum bv. trifolii WSM1325 8016037 YP_002978587.1 CDS Rleg_6081 NC_012852.1 115209 115646 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMa2267 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(115209..115646) Rhizobium leguminosarum bv. trifolii WSM1325 8016038 YP_002978588.1 CDS Rleg_6082 NC_012852.1 116215 116403 D KEGG: rec:RHECIAT_PC0000447 hypothetical protein; hypothetical protein 116215..116403 Rhizobium leguminosarum bv. trifolii WSM1325 8016039 YP_002978589.1 CDS Rleg_6083 NC_012852.1 116762 118621 D PFAM: glycoside hydrolase 15-related; KEGG: pst:PSPTO_2493 glycosy hydrolase family protein; glycoside hydrolase 15-related 116762..118621 Rhizobium leguminosarum bv. trifolii WSM1325 8016040 YP_002978590.1 CDS Rleg_6084 NC_012852.1 118943 119089 D PFAM: protein of unknown function DUF1127; KEGG: hypothetical protein; hypothetical protein 118943..119089 Rhizobium leguminosarum bv. trifolii WSM1325 8016041 YP_002978591.1 CDS Rleg_6085 NC_012852.1 119664 120056 R KEGG: bcz:BCZK4404 hypothetical protein; hypothetical protein complement(119664..120056) Rhizobium leguminosarum bv. trifolii WSM1325 8016042 YP_002978592.1 CDS Rleg_6086 NC_012852.1 120201 121067 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SM_b21419 putative transcriptional regulator, AraC family protein; AraC family transcriptional regulator complement(120201..121067) Rhizobium leguminosarum bv. trifolii WSM1325 8016043 YP_002978593.1 CDS Rleg_6087 NC_012852.1 121263 122432 D KEGG: jan:Jann_3094 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 121263..122432 Rhizobium leguminosarum bv. trifolii WSM1325 8016044 YP_002978594.1 CDS Rleg_6088 NC_012852.1 122458 124023 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: jan:Jann_3093 ABC transporter related; ABC transporter 122458..124023 Rhizobium leguminosarum bv. trifolii WSM1325 8016045 YP_002978595.1 CDS Rleg_6089 NC_012852.1 124020 125024 D PFAM: inner-membrane translocator; KEGG: jan:Jann_3092 inner-membrane translocator; inner-membrane translocator 124020..125024 Rhizobium leguminosarum bv. trifolii WSM1325 8016046 YP_002978596.1 CDS Rleg_6090 NC_012852.1 125055 126482 D KEGG: sme:SM_b21420 putative L-arabinose isomerase protein; putative L-arabinose isomerase protein 125055..126482 Rhizobium leguminosarum bv. trifolii WSM1325 8016047 YP_002978597.1 CDS Rleg_6091 NC_012852.1 126985 127443 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_PC0000157 probable transcriptional regulator protein; XRE family transcriptional regulator complement(126985..127443) Rhizobium leguminosarum bv. trifolii WSM1325 8016048 YP_002978598.1 CDS Rleg_6092 NC_012852.1 127800 129002 D PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_PB00161 fosmidomycin antibiotic resistence permease protein; major facilitator superfamily MFS_1 127800..129002 Rhizobium leguminosarum bv. trifolii WSM1325 8016049 YP_002978599.1 CDS Rleg_6093 NC_012852.1 129211 129771 D PFAM: NADPH-dependent FMN reductase; KEGG: NAD(P)H-dependent FMN reductase protein; FMN reductase 129211..129771 Rhizobium leguminosarum bv. trifolii WSM1325 8016050 YP_002978600.1 CDS Rleg_6094 NC_012852.1 130016 130855 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ret:RHE_PB00160 amino acid ABC transporter substrate-binding protein; lipoprotein, YaeC family 130016..130855 Rhizobium leguminosarum bv. trifolii WSM1325 8016051 YP_002978601.1 CDS Rleg_6095 NC_012852.1 130945 132033 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000160 putative ABC transporter, ATP-binding protein; ABC transporter 130945..132033 Rhizobium leguminosarum bv. trifolii WSM1325 8016052 YP_002978602.1 CDS Rleg_6096 NC_012852.1 132014 132667 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein ; K02072 D-methionine transport system permease protein; binding-protein-dependent transport systems inner membrane component 132014..132667 Rhizobium leguminosarum bv. trifolii WSM1325 8016053 YP_002978603.1 CDS Rleg_6097 NC_012852.1 132669 134027 R KEGG: rec:RHECIAT_PC0000162 probable monooxygenase protein; putative monooxygenase protein complement(132669..134027) Rhizobium leguminosarum bv. trifolii WSM1325 8016054 YP_002978604.1 CDS Rleg_6098 NC_012852.1 134261 136399 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 134261..136399 Rhizobium leguminosarum bv. trifolii WSM1325 8016055 YP_002978605.1 CDS Rleg_6099 NC_012852.1 136401 137561 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ret:RHE_PB00156 hypothetical protein; fumarylacetoacetate (FAA) hydrolase complement(136401..137561) Rhizobium leguminosarum bv. trifolii WSM1325 8016056 YP_002978606.1 CDS Rleg_6100 NC_012852.1 137929 138939 D PFAM: oxidoreductase domain protein; KEGG: rec:RHECIAT_PC0000165 probable oxidoreductase protein; oxidoreductase domain protein 137929..138939 Rhizobium leguminosarum bv. trifolii WSM1325 8016057 YP_002978607.1 CDS Rleg_6101 NC_012852.1 138950 140047 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_PB00154 oxidoreductase protein; oxidoreductase domain protein 138950..140047 Rhizobium leguminosarum bv. trifolii WSM1325 8016058 YP_002978608.1 CDS Rleg_6102 NC_012852.1 140066 140476 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_PC0000168 putative glyoxalase protein; Glyoxalase/bleomycin resistance protein/dioxygenase 140066..140476 Rhizobium leguminosarum bv. trifolii WSM1325 8016059 YP_002978609.1 CDS Rleg_6103 NC_012852.1 140433 140561 R hypothetical protein complement(140433..140561) Rhizobium leguminosarum bv. trifolii WSM1325 8016060 YP_002978610.1 CDS Rleg_6104 NC_012852.1 140574 142379 R TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: atzF; allophanate hydrolase ; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A; allophanate hydrolase complement(140574..142379) Rhizobium leguminosarum bv. trifolii WSM1325 8016061 YP_002978611.1 CDS Rleg_6105 NC_012852.1 142381 145920 R KEGG: ret:RHE_PE00118 putative UreA amidolyase protein; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase complement(142381..145920) Rhizobium leguminosarum bv. trifolii WSM1325 8016062 YP_002978612.1 CDS Rleg_6106 NC_012852.1 145924 146574 R TIGRFAM: urea carboxylase-associated protein 1; KEGG: ret:RHE_PE00119 hypothetical protein; urea carboxylase-associated protein 1 complement(145924..146574) Rhizobium leguminosarum bv. trifolii WSM1325 8016063 YP_002978613.1 CDS Rleg_6107 NC_012852.1 146586 147407 R TIGRFAM: urea carboxylase-associated protein 2; KEGG: rec:RHECIAT_PC0000105 hypothetical protein; urea carboxylase-associated protein 2 complement(146586..147407) Rhizobium leguminosarum bv. trifolii WSM1325 8016064 YP_002978614.1 CDS Rleg_6108 NC_012852.1 147404 148234 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter ; K02049 sulfonate/nitrate/taurine transport system ATP-binding protein; ABC transporter complement(147404..148234) Rhizobium leguminosarum bv. trifolii WSM1325 8016065 YP_002978615.1 CDS Rleg_6109 NC_012852.1 148231 149049 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00122 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(148231..149049) Rhizobium leguminosarum bv. trifolii WSM1325 8016066 YP_002978616.1 CDS Rleg_6110 NC_012852.1 149115 150188 R TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; PFAM: NLPA lipoprotein; KEGG: ABC transporter ; K02051 sulfonate/nitrate/taurine transport system substrate-binding protein; ABC transporter substrate-binding protein complement(149115..150188) Rhizobium leguminosarum bv. trifolii WSM1325 8016067 YP_002978617.1 CDS Rleg_6111 NC_012852.1 150581 151498 R PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_PC0000169 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator complement(150581..151498) Rhizobium leguminosarum bv. trifolii WSM1325 8016068 YP_002978618.1 CDS Rleg_6112 NC_012852.1 151585 152859 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PB00150 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 151585..152859 Rhizobium leguminosarum bv. trifolii WSM1325 8016069 YP_002978619.1 CDS Rleg_6113 NC_012852.1 152942 153802 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00149 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 152942..153802 Rhizobium leguminosarum bv. trifolii WSM1325 8016070 YP_002978620.1 CDS Rleg_6114 NC_012852.1 153799 154635 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000171 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 153799..154635 Rhizobium leguminosarum bv. trifolii WSM1325 8016071 YP_002978621.1 CDS Rleg_6115 NC_012852.1 154660 155742 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PB00147 sugar ABC transporter, ATP-binding protein; ABC transporter 154660..155742 Rhizobium leguminosarum bv. trifolii WSM1325 8016072 YP_002978622.1 CDS Rleg_6116 NC_012852.1 155782 157785 D PFAM: oxidoreductase domain protein; aldo/keto reductase; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: rec:RHECIAT_PC0000173 probable oxidoreductase protein; oxidoreductase domain protein 155782..157785 Rhizobium leguminosarum bv. trifolii WSM1325 8016073 YP_002978623.1 CDS Rleg_6117 NC_012852.1 157828 157950 R TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: azc:AZC_0586 putative outer membrane lipoprotein; cyd operon protein YbgT complement(157828..157950) Rhizobium leguminosarum bv. trifolii WSM1325 8016074 YP_002978624.1 CDS Rleg_6118 NC_012852.1 157964 159118 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: rec:RHECIAT_PC0000174 cytochrome bd ubiquinol oxidase protein, subunit II; cytochrome d ubiquinol oxidase, subunit II complement(157964..159118) Rhizobium leguminosarum bv. trifolii WSM1325 8016075 YP_002978625.1 CDS Rleg_6119 NC_012852.1 159125 160705 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: rec:RHECIAT_PC0000175 cytochrome bd ubiquinol oxidase protein, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(159125..160705) Rhizobium leguminosarum bv. trifolii WSM1325 8016076 YP_002978626.1 CDS Rleg_6120 NC_012852.1 160781 162472 R KEGG: rec:RHECIAT_PC0000176 putative ABC transporter involved in cytochrome bd biosynthesis, ATP-binding protein; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase; cysteine ABC transporter ATP-binding protein/permease complement(160781..162472) Rhizobium leguminosarum bv. trifolii WSM1325 8016077 YP_002978627.1 CDS Rleg_6121 NC_012852.1 162469 164214 R KEGG: rec:RHECIAT_PC0000177 putative ABC transporter involved in cytochrome bd biosynthesis, ATP-binding protein; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; cysteine ABC transporter ATP-binding protein/permease complement(162469..164214) Rhizobium leguminosarum bv. trifolii WSM1325 8016078 YP_002978628.1 CDS Rleg_6122 NC_012852.1 164219 164797 R KEGG: rec:RHECIAT_PC0000178 putative transcriptional regulator protein; putative transcriptional regulator protein complement(164219..164797) Rhizobium leguminosarum bv. trifolii WSM1325 8016079 YP_002978629.1 CDS Rleg_6123 NC_012852.1 165442 167403 D KEGG: cps:CPS_1445 hypothetical protein; hypothetical protein 165442..167403 Rhizobium leguminosarum bv. trifolii WSM1325 8016080 YP_002978630.1 CDS Rleg_6124 NC_012852.1 167630 168514 D KEGG: met:M446_1543 hypothetical protein; hypothetical protein 167630..168514 Rhizobium leguminosarum bv. trifolii WSM1325 8016081 YP_002978631.1 CDS Rleg_6125 NC_012852.1 168511 169497 D KEGG: met:M446_1542 hypothetical protein; hypothetical protein 168511..169497 Rhizobium leguminosarum bv. trifolii WSM1325 8016082 YP_002978632.1 CDS Rleg_6126 NC_012852.1 169663 170262 R PFAM: HupE/UreJ protein; KEGG: ret:RHE_PB00145 hypothetical protein; HupE/UreJ protein complement(169663..170262) Rhizobium leguminosarum bv. trifolii WSM1325 8016083 YP_002978633.1 CDS Rleg_6127 NC_012852.1 170541 171572 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ret:RHE_PB00144 phosphoglycerate oxidoreductase protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 170541..171572 Rhizobium leguminosarum bv. trifolii WSM1325 8016084 YP_002978634.1 CDS Rleg_6128 NC_012852.1 171701 172696 R PFAM: import inner membrane translocase subunit Tim44; KEGG: rec:RHECIAT_PC0000182 putative import inner membrane translocase protein, TIM family; import inner membrane translocase subunit Tim44 complement(171701..172696) Rhizobium leguminosarum bv. trifolii WSM1325 8016085 YP_002978635.1 CDS Rleg_6129 NC_012852.1 172781 173239 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ret:RHE_PB00140 hypothetical protein; YbaK/prolyl-tRNA synthetase associated region complement(172781..173239) Rhizobium leguminosarum bv. trifolii WSM1325 8016086 YP_002978636.1 CDS Rleg_6130 NC_012852.1 173487 174833 D PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_PC0000184 putative sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 173487..174833 Rhizobium leguminosarum bv. trifolii WSM1325 8016087 YP_002978637.1 CDS Rleg_6131 NC_012852.1 174898 176199 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000185 putative sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 174898..176199 Rhizobium leguminosarum bv. trifolii WSM1325 8016088 YP_002978638.1 CDS Rleg_6132 NC_012852.1 176202 177044 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000186 putative sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 176202..177044 Rhizobium leguminosarum bv. trifolii WSM1325 8016089 YP_002978639.1 CDS Rleg_6133 NC_012852.1 177044 178099 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000187 putative sugar ABC transporter, ATP-binding protein; ABC transporter 177044..178099 Rhizobium leguminosarum bv. trifolii WSM1325 8016090 YP_002978640.1 CDS Rleg_6134 NC_012852.1 178099 178878 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ret:RHE_PB00135 glycerophosphoryl diester phosphodiesterase protein; glycerophosphoryl diester phosphodiesterase 178099..178878 Rhizobium leguminosarum bv. trifolii WSM1325 8016091 YP_002978641.1 CDS Rleg_6135 NC_012852.1 178862 179866 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_PC0000189 putative transcriptional regulator protein, LacI family; transcriptional regulator, LacI family 178862..179866 Rhizobium leguminosarum bv. trifolii WSM1325 8016092 YP_002978642.1 CDS Rleg_6136 NC_012852.1 179866 180675 D PFAM: inositol monophosphatase; KEGG: rec:RHECIAT_PC0000190 putative myo-inositol monophosphatase protein; inositol monophosphatase 179866..180675 Rhizobium leguminosarum bv. trifolii WSM1325 8016093 YP_002978643.1 CDS Rleg_6137 NC_012852.1 180742 182397 R KEGG: GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(180742..182397) Rhizobium leguminosarum bv. trifolii WSM1325 8016094 YP_002978644.1 CDS Rleg_6138 NC_012852.1 182527 183390 R KEGG: ret:RHE_PB00132 hypothetical protein; hypothetical protein complement(182527..183390) Rhizobium leguminosarum bv. trifolii WSM1325 8016095 YP_002978645.1 CDS Rleg_6139 NC_012852.1 183462 184556 R PFAM: aminotransferase class V; KEGG: ret:RHE_PB00131 aspartate aminotransferase protein; aminotransferase class V complement(183462..184556) Rhizobium leguminosarum bv. trifolii WSM1325 8016096 YP_002978646.1 CDS Rleg_6140 NC_012852.1 184568 185347 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PB00130 putative oligopeptide ABC transporter, ATP binding protein; ABC transporter complement(184568..185347) Rhizobium leguminosarum bv. trifolii WSM1325 8016097 YP_002978647.1 CDS Rleg_6141 NC_012852.1 185344 186132 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000194 probable ABC transporter, ATP-binding protein; ABC transporter complement(185344..186132) Rhizobium leguminosarum bv. trifolii WSM1325 8016098 YP_002978648.1 CDS Rleg_6142 NC_012852.1 186129 186953 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000195 probable ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(186129..186953) Rhizobium leguminosarum bv. trifolii WSM1325 8016099 YP_002978649.1 CDS Rleg_6143 NC_012852.1 186950 187939 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000196 probable ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(186950..187939) Rhizobium leguminosarum bv. trifolii WSM1325 8016100 YP_002978650.1 CDS Rleg_6144 NC_012852.1 187980 189581 R PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PC0000197 probable oligopeptide ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 complement(187980..189581) Rhizobium leguminosarum bv. trifolii WSM1325 8016101 YP_002978651.1 CDS Rleg_6145 NC_012852.1 189722 191119 R KEGG: ret:RHE_PB00125 DszA family monooxygenase; DszA family monooxygenase complement(189722..191119) Rhizobium leguminosarum bv. trifolii WSM1325 8016102 YP_002978652.1 CDS Rleg_6146 NC_012852.1 191136 192185 R PFAM: inner-membrane translocator; KEGG: ret:RHE_PB00124 putative sugar ABC transporter, permease protein; inner-membrane translocator complement(191136..192185) Rhizobium leguminosarum bv. trifolii WSM1325 8016103 YP_002978653.1 CDS Rleg_6147 NC_012852.1 192182 193663 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PB00123 sugar ABC transporter, ATP-binding protein; ABC transporter complement(192182..193663) Rhizobium leguminosarum bv. trifolii WSM1325 8016104 YP_002978654.1 CDS Rleg_6148 NC_012852.1 193897 194943 D KEGG: ret:RHE_PB00122 sugar ABC transporter, substrate-binding protein; sugar ABC transporter substrate-binding protein 193897..194943 Rhizobium leguminosarum bv. trifolii WSM1325 8016105 YP_002978655.1 CDS Rleg_6149 NC_012852.1 195021 196229 D PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: ret:RHE_PB00121 acyl-CoA dehydrogenase protein; Acyl-CoA dehydrogenase type 2 domain protein 195021..196229 Rhizobium leguminosarum bv. trifolii WSM1325 8016106 YP_002978656.1 CDS Rleg_6150 NC_012852.1 196310 197527 R PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: ret:RHE_PB00120 FMNH2-dependent monooxygenase protein; Acyl-CoA dehydrogenase type 2 domain protein complement(196310..197527) Rhizobium leguminosarum bv. trifolii WSM1325 8016107 YP_002978657.1 CDS Rleg_6151 NC_012852.1 197698 197841 D hypothetical protein 197698..197841 Rhizobium leguminosarum bv. trifolii WSM1325 8016108 YP_002978658.1 CDS Rleg_6152 NC_012852.1 197850 199184 D KEGG: ret:RHE_PB00119 nitrilotriacetate monooxygenase protein, component A; nitrilotriacetate monooxygenase protein, component A 197850..199184 Rhizobium leguminosarum bv. trifolii WSM1325 8016109 YP_002978659.1 CDS Rleg_6153 NC_012852.1 199226 200269 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_PB00118 LacI family transcription regulator; transcriptional regulator, LacI family complement(199226..200269) Rhizobium leguminosarum bv. trifolii WSM1325 8016110 YP_002978660.1 CDS Rleg_6154 NC_012852.1 200404 201438 D PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: ret:RHE_PB00117 putative oxidoreductase protein; oxidoreductase domain protein 200404..201438 Rhizobium leguminosarum bv. trifolii WSM1325 8016111 YP_002978661.1 CDS Rleg_6155 NC_012852.1 201450 202352 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rec:RHECIAT_PC0000200 putative xylose isomerase domain protein; Xylose isomerase domain protein TIM barrel 201450..202352 Rhizobium leguminosarum bv. trifolii WSM1325 8016168 YP_002978662.1 CDS Rleg_6156 NC_012852.1 202415 203647 D PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b21595 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein family 1 202415..203647 Rhizobium leguminosarum bv. trifolii WSM1325 8016169 YP_002978663.1 CDS Rleg_6157 NC_012852.1 203822 204724 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b21594 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 203822..204724 Rhizobium leguminosarum bv. trifolii WSM1325 8016170 YP_002978664.1 CDS Rleg_6158 NC_012852.1 204721 205548 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_4914 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 204721..205548 Rhizobium leguminosarum bv. trifolii WSM1325 8016171 YP_002978665.1 CDS Rleg_6159 NC_012852.1 205545 206615 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000204 probable sugar ABC transporter, ATP-binding protein; ABC transporter 205545..206615 Rhizobium leguminosarum bv. trifolii WSM1325 8016172 YP_002978666.1 CDS Rleg_6160 NC_012852.1 206870 207892 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: transcriptional regulator LacI family ; K02529 LacI family transcriptional regulator; transcriptional regulator, LacI family 206870..207892 Rhizobium leguminosarum bv. trifolii WSM1325 8016173 YP_002978667.1 CDS Rleg_6161 NC_012852.1 207931 208884 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ABC transporter nucleotide binding/ATPase protein; periplasmic binding protein/LacI transcriptional regulator 207931..208884 Rhizobium leguminosarum bv. trifolii WSM1325 8016174 YP_002978668.1 CDS Rleg_6162 NC_012852.1 208881 209702 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter nucleotide binding/ATPase protein; ABC transporter 208881..209702 Rhizobium leguminosarum bv. trifolii WSM1325 8016175 YP_002978669.1 CDS Rleg_6163 NC_012852.1 209699 210703 D PFAM: inner-membrane translocator; KEGG: ABC transporter membrane spanning protein (sugar); inner-membrane translocator 209699..210703 Rhizobium leguminosarum bv. trifolii WSM1325 8016176 YP_002978670.1 CDS Rleg_6164 NC_012852.1 210708 211787 D PFAM: aryldialkylphosphatase; KEGG: resiniferatoxin-binding phosphotriesterase-related protein ; K07048; aryldialkylphosphatase 210708..211787 Rhizobium leguminosarum bv. trifolii WSM1325 8016177 YP_002978671.1 CDS Rleg_6165 NC_012852.1 211825 212598 D PFAM: protein of unknown function DUF1355; KEGG: atc:AGR_L_3482 hypothetical protein; hypothetical protein 211825..212598 Rhizobium leguminosarum bv. trifolii WSM1325 8016178 YP_002978672.1 CDS Rleg_6166 NC_012852.1 212637 213479 D PFAM: photosystem I assembly BtpA; KEGG: hypothetical protein ; K06971; photosystem I assembly BtpA 212637..213479 Rhizobium leguminosarum bv. trifolii WSM1325 8016179 YP_002978673.1 CDS Rleg_6167 NC_012852.1 213482 214129 D PFAM: TENA/THI-4 domain protein; KEGG: rsp:RSP_3694 putative transcription activator; transcriptional activator, TenA family 213482..214129 Rhizobium leguminosarum bv. trifolii WSM1325 8016180 YP_002978674.1 CDS Rleg_6168 NC_012852.1 214153 215046 D PFAM: PfkB domain protein; KEGG: rbsK; ribokinase ; K00852 ribokinase; PfkB domain protein 214153..215046 Rhizobium leguminosarum bv. trifolii WSM1325 8016181 YP_002978675.1 CDS Rleg_6169 NC_012852.1 215153 215986 D PFAM: inositol monophosphatase; KEGG: ret:RHE_PB00111 myo-inositol-1(or 4)-monophosphatase protein; Inositol-phosphate phosphatase 215153..215986 Rhizobium leguminosarum bv. trifolii WSM1325 8016182 YP_002978676.1 CDS Rleg_6170 NC_012852.1 216006 216290 R PFAM: Transport-associated OB domain protein; KEGG: ABC transporter nucleotide binding/ATPase protein; Transport-associated OB domain protein complement(216006..216290) Rhizobium leguminosarum bv. trifolii WSM1325 8016183 YP_002978677.1 CDS Rleg_6171 NC_012852.1 216432 216941 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 216432..216941 Rhizobium leguminosarum bv. trifolii WSM1325 8016184 YP_002978678.1 CDS Rleg_6172 NC_012852.1 216948 217820 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsq:Rsph17025_2061 LysR family transcriptional regulator; LysR family transcriptional regulator complement(216948..217820) Rhizobium leguminosarum bv. trifolii WSM1325 8016185 YP_002978679.1 CDS Rleg_6173 NC_012852.1 217914 218699 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsh:Rsph17029_3085 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 217914..218699 Rhizobium leguminosarum bv. trifolii WSM1325 8016186 YP_002978680.1 CDS Rleg_6174 NC_012852.1 218727 219425 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: mes:Meso_3140 hypothetical protein; hypothetical protein 218727..219425 Rhizobium leguminosarum bv. trifolii WSM1325 8016187 YP_002978681.1 CDS Rleg_6175 NC_012852.1 219695 220579 D PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: pcm1; protein-L-isoaspartate O-methyltransferase protein ; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 219695..220579 Rhizobium leguminosarum bv. trifolii WSM1325 8016188 YP_002978682.1 CDS Rleg_6176 NC_012852.1 220734 222023 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(220734..222023) Rhizobium leguminosarum bv. trifolii WSM1325 8016189 YP_002978683.1 CDS Rleg_6177 NC_012852.1 222050 222994 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000210 probable sugar ABC transporter, permease protein; inner-membrane translocator complement(222050..222994) Rhizobium leguminosarum bv. trifolii WSM1325 8016190 YP_002978684.1 CDS Rleg_6178 NC_012852.1 222991 224040 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000211 putative sugar ABC transporter, permease protein; inner-membrane translocator complement(222991..224040) Rhizobium leguminosarum bv. trifolii WSM1325 8016191 YP_002978685.1 CDS Rleg_6179 NC_012852.1 224030 225562 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PB00104 sugar ABC transporter, ATP-binding protein; ABC transporter complement(224030..225562) Rhizobium leguminosarum bv. trifolii WSM1325 8016192 YP_002978686.1 CDS Rleg_6180 NC_012852.1 225559 226971 R PFAM: Amidase; KEGG: ret:RHE_PB00103 putative amidase protein; Amidase complement(225559..226971) Rhizobium leguminosarum bv. trifolii WSM1325 8016193 YP_002978687.1 CDS Rleg_6181 NC_012852.1 226980 227966 R PFAM: basic membrane lipoprotein; KEGG: ret:RHE_PB00102 putative lipoprotein periplasmic protein; basic membrane lipoprotein complement(226980..227966) Rhizobium leguminosarum bv. trifolii WSM1325 8016194 YP_002978688.1 CDS Rleg_6182 NC_012852.1 228298 228927 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rec:RHECIAT_PC0000216 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase protein; CDP-alcohol phosphatidyltransferase 228298..228927 Rhizobium leguminosarum bv. trifolii WSM1325 8016195 YP_002978689.1 CDS Rleg_6183 NC_012852.1 228924 229544 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: ret:RHE_PB00100 putative acyltransferase protein; phospholipid/glycerol acyltransferase 228924..229544 Rhizobium leguminosarum bv. trifolii WSM1325 8016196 YP_002978690.1 CDS Rleg_6184 NC_012852.1 229541 230470 D PFAM: phosphatidate cytidylyltransferase; KEGG: rec:RHECIAT_PC0000218 phosphatidate cytidylyltransferase protein; phosphatidate cytidylyltransferase 229541..230470 Rhizobium leguminosarum bv. trifolii WSM1325 8016197 YP_002978691.1 CDS Rleg_6185 NC_012852.1 230487 230810 R KEGG: ret:RHE_PB00098 hypothetical protein; hypothetical protein complement(230487..230810) Rhizobium leguminosarum bv. trifolii WSM1325 8016198 YP_002978692.1 CDS Rleg_6186 NC_012852.1 230813 231727 R PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: ret:RHE_PB00097 DnaJ family molecular chaperone; chaperone DnaJ domain protein complement(230813..231727) Rhizobium leguminosarum bv. trifolii WSM1325 8016199 YP_002978693.1 CDS Rleg_6187 NC_012852.1 231872 232339 R PFAM: UspA domain protein; KEGG: ret:RHE_PB00096 putative universal stress protein; UspA domain protein complement(231872..232339) Rhizobium leguminosarum bv. trifolii WSM1325 8016200 YP_002978694.1 CDS Rleg_6188 NC_012852.1 232550 233398 D PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rec:RHECIAT_PC0000222 putative NAD-binding phosphogluconate dehydrogenase-like protein; Phosphogluconate dehydrogenase, NAD-binding, putative-like protein 232550..233398 Rhizobium leguminosarum bv. trifolii WSM1325 8016201 YP_002978695.1 CDS Rleg_6189 NC_012852.1 233405 233653 R TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: hypothetical protein; putative addiction module antidote protein, CopG/Arc/MetJ family complement(233405..233653) Rhizobium leguminosarum bv. trifolii WSM1325 8016202 YP_002978696.1 CDS Rleg_6190 NC_012852.1 233845 234720 D YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 233845..234720 Rhizobium leguminosarum bv. trifolii WSM1325 8016203 YP_002978697.1 CDS Rleg_6191 NC_012852.1 234806 236320 R PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PC0000232 probable dipeptide ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 complement(234806..236320) Rhizobium leguminosarum bv. trifolii WSM1325 8016204 YP_002978698.1 CDS Rleg_6192 NC_012852.1 236340 238052 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000233 probable dipeptide ABC transporter, ATP-binding protein; ABC transporter complement(236340..238052) Rhizobium leguminosarum bv. trifolii WSM1325 8016205 YP_002978699.1 CDS Rleg_6193 NC_012852.1 238049 238900 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00092 peptide ABC transporter permease; binding-protein-dependent transport systems inner membrane component complement(238049..238900) Rhizobium leguminosarum bv. trifolii WSM1325 8016206 YP_002978700.1 CDS Rleg_6194 NC_012852.1 238897 239835 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000235 probable dipeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(238897..239835) Rhizobium leguminosarum bv. trifolii WSM1325 8016207 YP_002978701.1 CDS Rleg_6195 NC_012852.1 239887 240777 R TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; KEGG: rec:RHECIAT_PC0000236 proline iminopeptidase protein; proline-specific peptidase complement(239887..240777) Rhizobium leguminosarum bv. trifolii WSM1325 8016208 YP_002978702.1 CDS Rleg_6196 NC_012852.1 240908 241735 D PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: rec:RHECIAT_PC0000237 probable transcriptional regulator protein, LuxR family; transcriptional regulator, LuxR family 240908..241735 Rhizobium leguminosarum bv. trifolii WSM1325 8016209 YP_002978703.1 CDS Rleg_6197 NC_012852.1 241800 242702 D KEGG: rec:RHECIAT_PC0000238 proline iminopeptidase protein; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; proline-specific peptidase 241800..242702 Rhizobium leguminosarum bv. trifolii WSM1325 8016210 YP_002978704.1 CDS Rleg_6198 NC_012852.1 242794 243651 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: transcriptional regulator protein; AraC family transcriptional regulator 242794..243651 Rhizobium leguminosarum bv. trifolii WSM1325 8016211 YP_002978705.1 CDS Rleg_6199 NC_012852.1 243746 244648 D PFAM: NmrA family protein; KEGG: hypothetical protein; NmrA family protein 243746..244648 Rhizobium leguminosarum bv. trifolii WSM1325 8016212 YP_002978706.1 CDS Rleg_6200 NC_012852.1 244712 245623 R PFAM: Acetamidase/Formamidase; KEGG: rec:RHECIAT_PC0000239 probable acetamidase/formamidase protein; Acetamidase/Formamidase complement(244712..245623) Rhizobium leguminosarum bv. trifolii WSM1325 8016213 YP_002978707.1 CDS Rleg_6201 NC_012852.1 245740 245871 D hypothetical protein 245740..245871 Rhizobium leguminosarum bv. trifolii WSM1325 8016214 YP_002978708.1 CDS Rleg_6202 NC_012852.1 245910 246692 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(245910..246692) Rhizobium leguminosarum bv. trifolii WSM1325 8016215 YP_002978709.1 CDS Rleg_6203 NC_012852.1 246705 247445 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(246705..247445) Rhizobium leguminosarum bv. trifolii WSM1325 8016216 YP_002978710.1 CDS Rleg_6204 NC_012852.1 247435 248571 R PFAM: Patatin; KEGG: patatin-like phospholipase domain-containing protein ; K07001; Patatin complement(247435..248571) Rhizobium leguminosarum bv. trifolii WSM1325 8016217 YP_002978711.1 CDS Rleg_6205 NC_012852.1 249107 250531 D PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00190 putative insertion sequence transposase protein; Integrase catalytic region 249107..250531 Rhizobium leguminosarum bv. trifolii WSM1325 8016218 YP_002978712.1 CDS Rleg_6206 NC_012852.1 250538 251275 R KEGG: ret:RHE_PD00189 hypothetical protein; hypothetical protein complement(250538..251275) Rhizobium leguminosarum bv. trifolii WSM1325 8016219 YP_002978713.1 CDS Rleg_6207 NC_012852.1 251716 252741 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0004010 probable sugar ABC transporter, permease protein; inner-membrane translocator complement(251716..252741) Rhizobium leguminosarum bv. trifolii WSM1325 8016220 YP_002978714.1 CDS Rleg_6209 NC_012852.1 253177 253305 D KEGG: smd:Smed_4886 integrase catalytic region; hypothetical protein 253177..253305 Rhizobium leguminosarum bv. trifolii WSM1325 8016164 YP_002978715.1 CDS Rleg_6210 NC_012852.1 253317 254759 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH01378 HlyD family protein secretion protein; type I secretion membrane fusion protein, HlyD family complement(253317..254759) Rhizobium leguminosarum bv. trifolii WSM1325 8016222 YP_002978716.1 CDS Rleg_6211 NC_012852.1 254756 256900 R PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000253 putative toxin secretion ABC transporter protein; ABC transporter complement(254756..256900) Rhizobium leguminosarum bv. trifolii WSM1325 8016223 YP_002978717.1 CDS Rleg_6212 NC_012852.1 256998 257306 R KEGG: ret:RHE_CH01376 hypothetical protein; hypothetical protein complement(256998..257306) Rhizobium leguminosarum bv. trifolii WSM1325 8016224 YP_002978718.1 CDS Rleg_6213 NC_012852.1 257383 258594 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ret:RHE_CH01375 P47K family cobalamin synthesis protein; cobalamin synthesis protein P47K complement(257383..258594) Rhizobium leguminosarum bv. trifolii WSM1325 8016225 YP_002978719.1 CDS Rleg_6214 NC_012852.1 258616 263874 R KEGG: rec:RHECIAT_PC0000256 hypothetical protein; hypothetical protein complement(258616..263874) Rhizobium leguminosarum bv. trifolii WSM1325 8016226 YP_002978720.1 CDS Rleg_6215 NC_012852.1 264172 265395 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ret:RHE_CH01373 P47K family cobalamin synthesis protein; cobalamin synthesis protein P47K complement(264172..265395) Rhizobium leguminosarum bv. trifolii WSM1325 8016227 YP_002978721.1 CDS Rleg_6216 NC_012852.1 265446 270632 R KEGG: ret:RHE_CH01372 hypothetical protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Ig family protein; SMART: Dystroglycan-type cadherin domain protein; outer membrane adhesin-like protein complement(265446..270632) Rhizobium leguminosarum bv. trifolii WSM1325 8016228 YP_002978722.1 CDS Rleg_6217 NC_012852.1 271211 272521 D PFAM: polysaccharide export protein; KEGG: ret:RHE_CH01370 exopolysaccharide biosynthesis protein; polysaccharide export protein 271211..272521 Rhizobium leguminosarum bv. trifolii WSM1325 8016229 YP_002978723.1 CDS Rleg_6218 NC_012852.1 272750 274258 D PFAM: polysaccharide biosynthesis protein; KEGG: rec:RHECIAT_PC0000260 probable transmembrane polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 272750..274258 Rhizobium leguminosarum bv. trifolii WSM1325 8016230 YP_002978724.1 CDS Rleg_6219 NC_012852.1 274683 275894 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ret:RHE_CH01368 aminotransferase protein (involved in cell wall biogenesis); Glutamine--scyllo-inositol transaminase complement(274683..275894) Rhizobium leguminosarum bv. trifolii WSM1325 8016231 YP_002978725.1 CDS Rleg_6220 NC_012852.1 275891 276865 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH01367 UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase complement(275891..276865) Rhizobium leguminosarum bv. trifolii WSM1325 8016232 YP_002978726.1 CDS Rleg_6221 NC_012852.1 276862 277581 R KEGG: rec:RHECIAT_PC0000263 putative acetyltransferase protein; putative acetyltransferase protein complement(276862..277581) Rhizobium leguminosarum bv. trifolii WSM1325 8016233 YP_002978727.1 CDS Rleg_6222 NC_012852.1 277571 278674 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ret:RHE_CH01365 putative aminotransferase protein; Glutamine--scyllo-inositol transaminase complement(277571..278674) Rhizobium leguminosarum bv. trifolii WSM1325 8016234 YP_002978728.1 CDS Rleg_6223 NC_012852.1 278671 279708 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH01364 oxidoreductase protein; oxidoreductase domain protein complement(278671..279708) Rhizobium leguminosarum bv. trifolii WSM1325 8016235 YP_002978729.1 CDS Rleg_6224 NC_012852.1 279705 280211 R PFAM: transferase hexapeptide repeat containing protein; KEGG: ret:RHE_CH01363 acetyltransferase protein; transferase hexapeptide repeat containing protein complement(279705..280211) Rhizobium leguminosarum bv. trifolii WSM1325 8016236 YP_002978730.1 CDS Rleg_6225 NC_012852.1 280763 281539 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ret:RHE_CH01362 two-component response regulator protein; two component transcriptional regulator, LuxR family 280763..281539 Rhizobium leguminosarum bv. trifolii WSM1325 8016237 YP_002978731.1 CDS Rleg_6226 NC_012852.1 281718 283559 R KEGG: ret:RHE_CH01361 hypothetical protein; hypothetical protein complement(281718..283559) Rhizobium leguminosarum bv. trifolii WSM1325 8016238 YP_002978732.1 CDS Rleg_6227 NC_012852.1 283564 284607 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ret:RHE_CH01360 dTDP-glucose 4,6-dehydratase protein; NAD-dependent epimerase/dehydratase complement(283564..284607) Rhizobium leguminosarum bv. trifolii WSM1325 8016239 YP_002978733.1 CDS Rleg_6228 NC_012852.1 284653 285999 R KEGG: ret:RHE_CH01359 putative sugar transferase involved in lipopolysaccharide synthesis, UDP-galactose-lipid carriertransferase protein; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(284653..285999) Rhizobium leguminosarum bv. trifolii WSM1325 8016240 YP_002978734.1 CDS Rleg_6229 NC_012852.1 286154 287020 R TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ret:RHE_CH01358 putative teichoic acid biosynthesis, UDP-N-acetyl-D-mannosaminuronic acid transferase protein; glycosyl transferase, WecB/TagA/CpsF family complement(286154..287020) Rhizobium leguminosarum bv. trifolii WSM1325 8016241 YP_002978735.1 CDS Rleg_6230 NC_012852.1 287179 287778 D hypothetical protein 287179..287778 Rhizobium leguminosarum bv. trifolii WSM1325 8016242 YP_002978736.1 CDS Rleg_6231 NC_012852.1 288423 290552 R KEGG: ret:RHE_CH01356 hypothetical protein; hypothetical protein complement(288423..290552) Rhizobium leguminosarum bv. trifolii WSM1325 8016243 YP_002978737.1 CDS Rleg_6232 NC_012852.1 290549 291874 R PFAM: O-antigen polymerase; KEGG: ret:RHE_CH01355 exopolysaccharide production protein; O-antigen polymerase complement(290549..291874) Rhizobium leguminosarum bv. trifolii WSM1325 8016244 YP_002978738.1 CDS Rleg_6233 NC_012852.1 292488 293438 D PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH01354 glycosyltransferase; glycosyl transferase family 2 292488..293438 Rhizobium leguminosarum bv. trifolii WSM1325 8016245 YP_002978739.1 CDS Rleg_6234 NC_012852.1 293435 294535 D PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH01353 putative glycosyltransferase protein; glycosyl transferase group 1 293435..294535 Rhizobium leguminosarum bv. trifolii WSM1325 8016246 YP_002978740.1 CDS Rleg_6235 NC_012852.1 294529 295674 D PFAM: glycosyl transferase group 1; KEGG: ret:RHE_CH01352 glycosyltransferase; glycosyl transferase group 1 294529..295674 Rhizobium leguminosarum bv. trifolii WSM1325 8016247 YP_002978741.1 CDS Rleg_6236 NC_012852.1 295671 297878 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: ret:RHE_CH01351 exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 295671..297878 Rhizobium leguminosarum bv. trifolii WSM1325 8016248 YP_002978742.1 CDS Rleg_6237 NC_012852.1 297932 299023 D TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH01350 GDP-mannose 4,6-dehydratase protein; GDP-mannose 4,6-dehydratase 297932..299023 Rhizobium leguminosarum bv. trifolii WSM1325 8016249 YP_002978743.1 CDS Rleg_6238 NC_012852.1 299016 300086 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mpo:Mpop_5160 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 299016..300086 Rhizobium leguminosarum bv. trifolii WSM1325 8016029 YP_002978744.1 CDS Rleg_6240 NC_012852.1 301403 304711 R TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: traA; Ti-type conjugative transfer relaxase TraA; Ti-type conjugative transfer relaxase TraA complement(301403..304711) Rhizobium leguminosarum bv. trifolii WSM1325 8016165 YP_002978745.1 CDS Rleg_6241 NC_012852.1 304998 305309 D KEGG: mobilization protein C; mobilization protein C 304998..305309 Rhizobium leguminosarum bv. trifolii WSM1325 8016113 YP_002978746.1 CDS Rleg_6243 NC_012852.1 305755 306693 D PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: ret:RHE_CH02651 hypothetical protein; hypothetical protein 305755..306693 Rhizobium leguminosarum bv. trifolii WSM1325 8016166 YP_002978747.1 CDS Rleg_6244 NC_012852.1 307361 308251 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator complement(307361..308251) Rhizobium leguminosarum bv. trifolii WSM1325 8016115 YP_002978748.1 CDS Rleg_6245 NC_012852.1 308418 308654 D KEGG: rec:RHECIAT_CH0003079 hypothetical protein; hypothetical protein 308418..308654 Rhizobium leguminosarum bv. trifolii WSM1325 8016116 YP_002978749.1 CDS Rleg_6246 NC_012852.1 309055 310104 R PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: sal:Sala_1706 methyltransferase type 12; Methyltransferase type 12 complement(309055..310104) Rhizobium leguminosarum bv. trifolii WSM1325 8016117 YP_002978750.1 CDS Rleg_6247 NC_012852.1 310279 311337 R PFAM: regulatory protein LuxR; alpha/beta hydrolase fold; SMART: regulatory protein LuxR; KEGG: bph:Bphy_5343 LuxR family transcriptional regulator; transcriptional regulator, LuxR family complement(310279..311337) Rhizobium leguminosarum bv. trifolii WSM1325 8016118 YP_002978751.1 CDS Rleg_6248 NC_012852.1 311449 313071 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: FAD-dependent L-sorbose dehydrogenase protein; Choline dehydrogenase complement(311449..313071) Rhizobium leguminosarum bv. trifolii WSM1325 8016119 YP_002978752.1 CDS Rleg_6249 NC_012852.1 313092 313982 R PFAM: Aldose 1-epimerase; KEGG: spe:Spro_4225 aldose 1-epimerase; Aldose 1-epimerase complement(313092..313982) Rhizobium leguminosarum bv. trifolii WSM1325 8016120 YP_002978753.1 CDS Rleg_6250 NC_012852.1 313987 314994 R PFAM: inner-membrane translocator; KEGG: spe:Spro_4227 monosaccharide-transporting ATPase; inner-membrane translocator complement(313987..314994) Rhizobium leguminosarum bv. trifolii WSM1325 8016121 YP_002978754.1 CDS Rleg_6251 NC_012852.1 315009 316535 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ecc:c3069 ABC transporter ATP-binding protein; ABC transporter complement(315009..316535) Rhizobium leguminosarum bv. trifolii WSM1325 8016122 YP_002978755.1 CDS Rleg_6252 NC_012852.1 316607 317587 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ect:ECIAI39_2751 putative sugar transporter subunit: periplasmic-binding component of ABC superfamily; periplasmic binding protein/LacI transcriptional regulator complement(316607..317587) Rhizobium leguminosarum bv. trifolii WSM1325 8016123 YP_002978756.1 CDS Rleg_6253 NC_012852.1 317828 318598 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator, GntR family; GntR family transcriptional regulator 317828..318598 Rhizobium leguminosarum bv. trifolii WSM1325 8016124 YP_002978757.1 CDS Rleg_6254 NC_012852.1 319100 319711 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0001648 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 319100..319711 Rhizobium leguminosarum bv. trifolii WSM1325 8016125 YP_002978758.1 CDS Rleg_6255 NC_012852.1 319760 321397 R TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: rec:RHECIAT_CH0002887 L-ribulokinase protein; FGGY-family pentulose kinase complement(319760..321397) Rhizobium leguminosarum bv. trifolii WSM1325 8016126 YP_002978759.1 CDS Rleg_6256 NC_012852.1 321453 322181 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rdh; ribitol 2-dehydrogenase; short-chain dehydrogenase/reductase SDR complement(321453..322181) Rhizobium leguminosarum bv. trifolii WSM1325 8016127 YP_002978760.1 CDS Rleg_6257 NC_012852.1 322306 323028 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH02748 putative hydrolase protein; HAD-superfamily hydrolase, subfamily IA, variant 3 complement(322306..323028) Rhizobium leguminosarum bv. trifolii WSM1325 8016128 YP_002978761.1 CDS Rleg_6258 NC_012852.1 323032 323760 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rec:RHECIAT_CH0002889 glycerophosphoryl diester phosphodiesterase protein; glycerophosphoryl diester phosphodiesterase complement(323032..323760) Rhizobium leguminosarum bv. trifolii WSM1325 8016129 YP_002978762.1 CDS Rleg_6259 NC_012852.1 323789 324709 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH02750 sn-glycerol-3-phosphate ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(323789..324709) Rhizobium leguminosarum bv. trifolii WSM1325 8016130 YP_002978763.1 CDS Rleg_6260 NC_012852.1 324712 325680 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0002891 sn-glycerol-3-phosphate ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(324712..325680) Rhizobium leguminosarum bv. trifolii WSM1325 8016131 YP_002978764.1 CDS Rleg_6261 NC_012852.1 325691 326977 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0002892 sn-glycerol-3-phosphate ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 complement(325691..326977) Rhizobium leguminosarum bv. trifolii WSM1325 8016132 YP_002978765.1 CDS ugpC NC_012852.1 327205 328239 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 327205..328239 Rhizobium leguminosarum bv. trifolii WSM1325 8016133 YP_002978766.1 CDS Rleg_6263 NC_012852.1 328329 329333 D PFAM: putative sugar-binding domain protein; KEGG: rec:RHECIAT_CH0002894 putative transcriptional regulator protein, DeoR family; transcriptional regulator, DeoR family 328329..329333 Rhizobium leguminosarum bv. trifolii WSM1325 8016134 YP_002978767.1 CDS Rleg_6264 NC_012852.1 329489 330232 D KEGG: ret:RHE_PB00041 L-isoaspartyl protein carboxyl methyltransferase protein; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; protein-L-isoaspartate O-methyltransferase 329489..330232 Rhizobium leguminosarum bv. trifolii WSM1325 8016135 YP_002978768.1 CDS Rleg_6265 NC_012852.1 330365 331129 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PB00038 GntR family transcriptional regulator; GntR family transcriptional regulator complement(330365..331129) Rhizobium leguminosarum bv. trifolii WSM1325 8016136 YP_002978769.1 CDS Rleg_6266 NC_012852.1 331154 332218 R KEGG: rec:RHECIAT_PC0000315 hypothetical protein; hypothetical protein complement(331154..332218) Rhizobium leguminosarum bv. trifolii WSM1325 8016137 YP_002978770.1 CDS Rleg_6267 NC_012852.1 332215 333207 R KEGG: rec:RHECIAT_PC0000316 probable oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase complement(332215..333207) Rhizobium leguminosarum bv. trifolii WSM1325 8016138 YP_002978771.1 CDS Rleg_6268 NC_012852.1 333207 334214 R KEGG: ret:RHE_PB00035 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase complement(333207..334214) Rhizobium leguminosarum bv. trifolii WSM1325 8016139 YP_002978772.1 CDS Rleg_6269 NC_012852.1 334211 335167 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00034 putative oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(334211..335167) Rhizobium leguminosarum bv. trifolii WSM1325 8016140 YP_002978773.1 CDS Rleg_6270 NC_012852.1 335170 336126 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00033 putative oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(335170..336126) Rhizobium leguminosarum bv. trifolii WSM1325 8016141 YP_002978774.1 CDS Rleg_6271 NC_012852.1 336257 337891 R PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_PB00032 putative oligopeptide ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 complement(336257..337891) Rhizobium leguminosarum bv. trifolii WSM1325 8016142 YP_002978775.1 CDS Rleg_6272 NC_012852.1 338218 339123 D PFAM: dihydrodipicolinate synthetase; KEGG: rec:RHECIAT_PC0000321 dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase 338218..339123 Rhizobium leguminosarum bv. trifolii WSM1325 8016143 YP_002978776.1 CDS Rleg_6273 NC_012852.1 339135 340322 D KEGG: ret:RHE_PB00030 putative glycosyl hydrolase protein; putative glycosyl hydrolase protein 339135..340322 Rhizobium leguminosarum bv. trifolii WSM1325 8016144 YP_002978777.1 CDS Rleg_6274 NC_012852.1 340675 341808 D PFAM: iron-containing alcohol dehydrogenase; KEGG: rec:RHECIAT_PC0000323 probable iron alcohol dehydrogenase protein; iron-containing alcohol dehydrogenase 340675..341808 Rhizobium leguminosarum bv. trifolii WSM1325 8016145 YP_002978778.1 CDS Rleg_6275 NC_012852.1 341840 342826 D KEGG: rec:RHECIAT_PC0000324 4-hydroxythreonine-4-phosphate dehydrogenase protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 341840..342826 Rhizobium leguminosarum bv. trifolii WSM1325 8016146 YP_002978779.1 CDS Rleg_6276 NC_012852.1 342996 343250 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rec:RHECIAT_CH0001235 hypothetical protein; prevent-host-death family protein 342996..343250 Rhizobium leguminosarum bv. trifolii WSM1325 8016147 YP_002978780.1 CDS Rleg_6277 NC_012852.1 343250 343657 D PFAM: PilT protein domain protein; KEGG: sme:SMa0453 hypothetical protein; PilT protein domain protein 343250..343657 Rhizobium leguminosarum bv. trifolii WSM1325 8016148 YP_002978781.1 CDS Rleg_6278 NC_012852.1 343842 344324 R PFAM: RES domain protein; KEGG: mlo:mlr9079 hypothetical protein; RES domain protein complement(343842..344324) Rhizobium leguminosarum bv. trifolii WSM1325 8016149 YP_002978782.1 CDS Rleg_6279 NC_012852.1 344321 344752 R KEGG: mlo:mlr9078 hypothetical protein; hypothetical protein complement(344321..344752) Rhizobium leguminosarum bv. trifolii WSM1325 8016150 YP_002978783.1 CDS Rleg_6280 NC_012852.1 344893 345771 D PFAM: alanyl-tRNA synthetase class IIc; KEGG: ret:RHE_PB00027 class II aminoacyl t-RNA synthetase domain-containing protein; alanyl-tRNA synthetase class IIc 344893..345771 Rhizobium leguminosarum bv. trifolii WSM1325 8016151 YP_002978784.1 CDS Rleg_6281 NC_012852.1 345903 346673 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll8571 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(345903..346673) Rhizobium leguminosarum bv. trifolii WSM1325 8016152 YP_002978785.1 CDS Rleg_6282 NC_012852.1 346670 347470 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll8572 ABC transporter, ATP-binding protein; ABC transporter complement(346670..347470) Rhizobium leguminosarum bv. trifolii WSM1325 8016153 YP_002978786.1 CDS Rleg_6283 NC_012852.1 347467 348612 R PFAM: NMT1/THI5 like domain protein; KEGG: mlo:mll8573 hypothetical protein; NMT1/THI5 like domain protein complement(347467..348612) Rhizobium leguminosarum bv. trifolii WSM1325 8016154 YP_002978787.1 CDS Rleg_6284 NC_012852.1 348566 349003 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll8574 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(348566..349003) Rhizobium leguminosarum bv. trifolii WSM1325 8016155 YP_002978788.1 CDS Rleg_6285 NC_012852.1 349111 349974 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rpb:RPB_3417 AraC family transcriptional regulator; AraC family transcriptional regulator complement(349111..349974) Rhizobium leguminosarum bv. trifolii WSM1325 8016156 YP_002978789.1 CDS Rleg_6286 NC_012852.1 350077 350211 R hypothetical protein complement(350077..350211) Rhizobium leguminosarum bv. trifolii WSM1325 8016157 YP_002978790.1 CDS Rleg_5412 NC_012853.1 224 601 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: cvi:CV_2781 hypothetical protein; glutathione-dependent formaldehyde-activating GFA 224..601 Rhizobium leguminosarum bv. trifolii WSM1325 8016392 YP_002978791.1 CDS Rleg_5413 NC_012853.1 1073 1513 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bbr:BB2470 hypothetical protein; transcriptional regulator, MarR family 1073..1513 Rhizobium leguminosarum bv. trifolii WSM1325 8016722 YP_002978792.1 CDS Rleg_5414 NC_012853.1 1602 2018 D KEGG: mes:Meso_1108 hypothetical protein; hypothetical protein 1602..2018 Rhizobium leguminosarum bv. trifolii WSM1325 8016723 YP_002978793.1 CDS Rleg_5415 NC_012853.1 2091 2402 R hypothetical protein complement(2091..2402) Rhizobium leguminosarum bv. trifolii WSM1325 8016724 YP_002978794.1 CDS Rleg_5416 NC_012853.1 2424 2825 R LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; response regulator complement(2424..2825) Rhizobium leguminosarum bv. trifolii WSM1325 8016725 YP_002978795.1 CDS Rleg_5417 NC_012853.1 2915 3043 D hypothetical protein 2915..3043 Rhizobium leguminosarum bv. trifolii WSM1325 8016726 YP_002978796.1 CDS Rleg_5418 NC_012853.1 3277 3504 D hypothetical protein 3277..3504 Rhizobium leguminosarum bv. trifolii WSM1325 8016727 YP_002978797.1 CDS Rleg_5419 NC_012853.1 3523 4278 D KEGG: mpo:Mpop_0106 glutaredoxin; glutaredoxin 3523..4278 Rhizobium leguminosarum bv. trifolii WSM1325 8016728 YP_002978798.1 CDS Rleg_5420 NC_012853.1 4519 5007 R KEGG: sme:SMc03832 signal peptide protein; signal peptide protein complement(4519..5007) Rhizobium leguminosarum bv. trifolii WSM1325 8016729 YP_002978799.1 CDS Rleg_5421 NC_012853.1 5523 5648 R hypothetical protein complement(5523..5648) Rhizobium leguminosarum bv. trifolii WSM1325 8016730 YP_002978800.1 CDS Rleg_5422 NC_012853.1 5870 7927 R PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; KEGG: mch:Mchl_4788 histidine kinase; histidine kinase complement(5870..7927) Rhizobium leguminosarum bv. trifolii WSM1325 8016731 YP_002978801.1 CDS Rleg_5423 NC_012853.1 8094 8444 D KEGG: ret:RHE_CH01758 hypothetical protein; hypothetical protein 8094..8444 Rhizobium leguminosarum bv. trifolii WSM1325 8016732 YP_002978802.1 CDS Rleg_5424 NC_012853.1 8681 9055 R KEGG: hypothetical protein; hypothetical protein complement(8681..9055) Rhizobium leguminosarum bv. trifolii WSM1325 8016733 YP_002978803.1 CDS Rleg_5426 NC_012853.1 10715 11083 D PFAM: BA14K family protein; KEGG: bcs:BCAN_B0743 BA14K family protein; BA14K family protein 10715..11083 Rhizobium leguminosarum bv. trifolii WSM1325 8016735 YP_002978804.1 CDS Rleg_5427 NC_012853.1 11613 11870 R PFAM: protein of unknown function DUF982; KEGG: sme:SM_b21296 hypothetical protein; hypothetical protein complement(11613..11870) Rhizobium leguminosarum bv. trifolii WSM1325 8016736 YP_002978805.1 CDS Rleg_5428 NC_012853.1 12116 13300 D PFAM: monooxygenase FAD-binding; KEGG: ftn:FTN_1049 hypothetical protein; hypothetical protein 12116..13300 Rhizobium leguminosarum bv. trifolii WSM1325 8016737 YP_002978806.1 CDS Rleg_5429 NC_012853.1 13502 13690 D KEGG: rec:RHECIAT_PC0000150 hypothetical protein; hypothetical protein 13502..13690 Rhizobium leguminosarum bv. trifolii WSM1325 8016738 YP_002978807.1 CDS Rleg_5430 NC_012853.1 13842 14183 R KEGG: sme:SM_b20236 hypothetical protein; hypothetical protein complement(13842..14183) Rhizobium leguminosarum bv. trifolii WSM1325 8016739 YP_002978808.1 CDS Rleg_5431 NC_012853.1 14180 14335 R hypothetical protein complement(14180..14335) Rhizobium leguminosarum bv. trifolii WSM1325 8016740 YP_002978809.1 CDS Rleg_5433 NC_012853.1 15229 15360 R hypothetical protein complement(15229..15360) Rhizobium leguminosarum bv. trifolii WSM1325 8016742 YP_002978810.1 CDS Rleg_5436 NC_012853.1 16322 17023 R PFAM: protein of unknown function DUF1223; KEGG: xau:Xaut_1385 hypothetical protein; hypothetical protein complement(16322..17023) Rhizobium leguminosarum bv. trifolii WSM1325 8016745 YP_002978811.1 CDS Rleg_5437 NC_012853.1 17227 17631 D KEGG: bra:BRADO6716 thioredoxin (H-type,TRX-H); thioredoxin (H-type,TRX-H) 17227..17631 Rhizobium leguminosarum bv. trifolii WSM1325 8016746 YP_002978812.1 CDS Rleg_5438 NC_012853.1 17635 18354 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mrd:Mrad2831_5394 cytochrome c biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane region 17635..18354 Rhizobium leguminosarum bv. trifolii WSM1325 8016747 YP_002978813.1 CDS Rleg_5439 NC_012853.1 18737 19291 R KEGG: rec:RHECIAT_PB0000304 hypothetical protein; hypothetical protein complement(18737..19291) Rhizobium leguminosarum bv. trifolii WSM1325 8016748 YP_002978814.1 CDS Rleg_5440 NC_012853.1 19422 19829 R KEGG: ret:RHE_PD00012 hypothetical protein; hypothetical protein complement(19422..19829) Rhizobium leguminosarum bv. trifolii WSM1325 8016749 YP_002978815.1 CDS Rleg_5441 NC_012853.1 20227 20355 D hypothetical protein 20227..20355 Rhizobium leguminosarum bv. trifolii WSM1325 8016750 YP_002978816.1 CDS Rleg_5443 NC_012853.1 20930 21424 D hypothetical protein 20930..21424 Rhizobium leguminosarum bv. trifolii WSM1325 8016752 YP_002978817.1 CDS Rleg_5444 NC_012853.1 21434 21547 R hypothetical protein complement(21434..21547) Rhizobium leguminosarum bv. trifolii WSM1325 8016753 YP_002978818.1 CDS Rleg_5445 NC_012853.1 21547 22542 R hypothetical protein complement(21547..22542) Rhizobium leguminosarum bv. trifolii WSM1325 8016754 YP_002978819.1 CDS Rleg_5446 NC_012853.1 23257 24033 D hypothetical protein 23257..24033 Rhizobium leguminosarum bv. trifolii WSM1325 8016755 YP_002978820.1 CDS Rleg_5447 NC_012853.1 24030 25334 D hypothetical protein 24030..25334 Rhizobium leguminosarum bv. trifolii WSM1325 8016756 YP_002978821.1 CDS Rleg_5448 NC_012853.1 25337 26617 D KEGG: nmu:Nmul_A0115 hypothetical protein; hypothetical protein 25337..26617 Rhizobium leguminosarum bv. trifolii WSM1325 8016757 YP_002978822.1 CDS Rleg_5449 NC_012853.1 26614 27714 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: GK23888 gene product from transcript GK23888-RA; peptidase S1 and S6 chymotrypsin/Hap 26614..27714 Rhizobium leguminosarum bv. trifolii WSM1325 8016758 YP_002978823.1 CDS Rleg_5450 NC_012853.1 27720 29678 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bra:BRADO3551 hypothetical protein; peptidase C14 caspase catalytic subunit p20 27720..29678 Rhizobium leguminosarum bv. trifolii WSM1325 8016759 YP_002978824.1 CDS Rleg_5451 NC_012853.1 29692 30708 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: Prss8; protease, serine, 8 (prostasin) ; K08664 protease, serine, 8 (prostasin); peptidase S1 and S6 chymotrypsin/Hap 29692..30708 Rhizobium leguminosarum bv. trifolii WSM1325 8016760 YP_002978825.1 CDS Rleg_5453 NC_012853.1 31613 33232 D PFAM: Peptidase S53 propeptide; KEGG: bac:BamMC406_5169 peptidase S53 propeptide; Peptidase S53 propeptide 31613..33232 Rhizobium leguminosarum bv. trifolii WSM1325 8016762 YP_002978826.1 CDS Rleg_5454 NC_012853.1 33294 34328 D KEGG: hypothetical protein; hypothetical protein 33294..34328 Rhizobium leguminosarum bv. trifolii WSM1325 8016763 YP_002978827.1 CDS Rleg_5455 NC_012853.1 34751 36406 D KEGG: lpp:lpp2172 hypothetical protein; hypothetical protein 34751..36406 Rhizobium leguminosarum bv. trifolii WSM1325 8016764 YP_002978828.1 CDS Rleg_5456 NC_012853.1 36393 37499 D KEGG: mxa:MXAN_2365 hypothetical protein; hypothetical protein 36393..37499 Rhizobium leguminosarum bv. trifolii WSM1325 8016765 YP_002978829.1 CDS Rleg_5457 NC_012853.1 37524 39671 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: afw:Anae109_1811 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 37524..39671 Rhizobium leguminosarum bv. trifolii WSM1325 8016766 YP_002978830.1 CDS Rleg_5458 NC_012853.1 39773 40030 D hypothetical protein 39773..40030 Rhizobium leguminosarum bv. trifolii WSM1325 8016767 YP_002978831.1 CDS Rleg_5459 NC_012853.1 40139 41743 D SMART: phospholipase D/Transphosphatidylase; KEGG: rpc:RPC_3413 hypothetical protein; phospholipase D/Transphosphatidylase 40139..41743 Rhizobium leguminosarum bv. trifolii WSM1325 8016768 YP_002978832.1 CDS Rleg_5460 NC_012853.1 42028 43548 D KEGG: jan:Jann_2613 hypothetical protein; hypothetical protein 42028..43548 Rhizobium leguminosarum bv. trifolii WSM1325 8016769 YP_002978833.1 CDS Rleg_5461 NC_012853.1 43578 45887 D SMART: AAA ATPase; KEGG: bcm:Bcenmc03_0023 AAA ATPase; AAA ATPase 43578..45887 Rhizobium leguminosarum bv. trifolii WSM1325 8016770 YP_002978834.1 CDS Rleg_5462 NC_012853.1 45884 46891 D KEGG: scl:sce1431 hypothetical protein; hypothetical protein 45884..46891 Rhizobium leguminosarum bv. trifolii WSM1325 8016771 YP_002978835.1 CDS Rleg_5463 NC_012853.1 47237 47623 D PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PD00345 insertion sequence transposase protein; transposase IS3/IS911 family protein 47237..47623 Rhizobium leguminosarum bv. trifolii WSM1325 8016772 YP_002978836.1 CDS Rleg_5465 NC_012853.1 47896 48795 R KEGG: xca:xccb100_2632 hypothetical protein; hypothetical protein complement(47896..48795) Rhizobium leguminosarum bv. trifolii WSM1325 8016774 YP_002978837.1 CDS Rleg_5466 NC_012853.1 49367 49672 R hypothetical protein complement(49367..49672) Rhizobium leguminosarum bv. trifolii WSM1325 8016775 YP_002978838.1 CDS Rleg_5467 NC_012853.1 50336 51472 R KEGG: dac:Daci_1708 hypothetical protein; hypothetical protein complement(50336..51472) Rhizobium leguminosarum bv. trifolii WSM1325 8016776 YP_002978839.1 CDS Rleg_5468 NC_012853.1 51542 53461 R KEGG: pde:Pden_1438 pathogenesis-related protein; pathogenesis-related protein complement(51542..53461) Rhizobium leguminosarum bv. trifolii WSM1325 8016777 YP_002978840.1 CDS Rleg_5469 NC_012853.1 53458 55749 R KEGG: pae:PA1939 hypothetical protein; hypothetical protein complement(53458..55749) Rhizobium leguminosarum bv. trifolii WSM1325 8016778 YP_002978841.1 CDS Rleg_5470 NC_012853.1 55975 57066 R PFAM: protein of unknown function DUF1612; KEGG: Y4cF protein; hypothetical protein complement(55975..57066) Rhizobium leguminosarum bv. trifolii WSM1325 8016779 YP_002978842.1 CDS Rleg_5471 NC_012853.1 57292 58440 D PFAM: integrase family protein; KEGG: integrase IntA; integrase family protein 57292..58440 Rhizobium leguminosarum bv. trifolii WSM1325 8016780 YP_002978843.1 CDS Rleg_5473 NC_012853.1 58663 58959 D KEGG: bph:Bphy_4499 hypothetical protein; hypothetical protein 58663..58959 Rhizobium leguminosarum bv. trifolii WSM1325 8016782 YP_002978844.1 CDS Rleg_5475 NC_012853.1 59347 60522 D SMART: AAA ATPase; KEGG: mlo:mlr9349 hypothetical protein; AAA ATPase 59347..60522 Rhizobium leguminosarum bv. trifolii WSM1325 8016784 YP_002978845.1 CDS Rleg_5477 NC_012853.1 61047 62150 D PFAM: filamentation induced by cAMP protein Fic; KEGG: hypothetical protein; filamentation induced by cAMP protein Fic 61047..62150 Rhizobium leguminosarum bv. trifolii WSM1325 8016786 YP_002978846.1 CDS Rleg_5478 NC_012853.1 63685 64878 R PFAM: replication protein C; KEGG: repC; replication protein C; replication protein C complement(63685..64878) Rhizobium leguminosarum bv. trifolii WSM1325 8016787 YP_002978847.1 CDS Rleg_5479 NC_012853.1 65188 66216 R KEGG: repB; replication protein B; TIGRFAM: plasmid partitioning protein RepB; parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; SMART: ParB domain protein nuclease; plasmid partitioning protein RepB complement(65188..66216) Rhizobium leguminosarum bv. trifolii WSM1325 8016788 YP_002978848.1 CDS Rleg_5480 NC_012853.1 66213 67430 R TIGRFAM: plasmid partitioning protein RepA; PFAM: Cobyrinic acid ac-diamide synthase; regulatory protein MerR; KEGG: ret:RHE_PA00033 plasmid partitioning protein RepAa2; SNP /replace=C; plasmid partitioning protein RepA complement(66213..67430) Rhizobium leguminosarum bv. trifolii WSM1325 8016789 YP_002978849.1 CDS Rleg_5481 NC_012853.1 67795 68421 D PFAM: autoinducer synthesis protein; KEGG: smd:Smed_5375 autoinducer synthesis protein; autoinducer synthesis protein 67795..68421 Rhizobium leguminosarum bv. trifolii WSM1325 8016790 YP_002978850.1 CDS Rleg_5482 NC_012853.1 68435 69400 D VirB11 family protein; ATPase; conjugal transfer protein TrbB 68435..69400 Rhizobium leguminosarum bv. trifolii WSM1325 8016791 YP_002978851.1 CDS Rleg_5483 NC_012853.1 69390 69770 D PFAM: Conjugal transfer protein TrbC; KEGG: trbC; conjugal transfer protein ; K03197 type IV secretion system protein VirB2; Conjugal transfer protein TrbC 69390..69770 Rhizobium leguminosarum bv. trifolii WSM1325 8016792 YP_002978852.1 CDS Rleg_5484 NC_012853.1 69760 70059 D PFAM: Conjugal transfer TrbD family protein; KEGG: ret:RHE_PA00176 conjugal transfer protein D; conjugal transfer protein TrbD 69760..70059 Rhizobium leguminosarum bv. trifolii WSM1325 8016793 YP_002978853.1 CDS Rleg_5485 NC_012853.1 70069 72516 D type IV secretion system ATPase; VirB4 family; conjugal transfer protein TrbE 70069..72516 Rhizobium leguminosarum bv. trifolii WSM1325 8016794 YP_002978854.1 CDS Rleg_5486 NC_012853.1 72488 73288 D TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: trbJ; P-type conjugative transfer protein TrbJ; conjugal transfer protein TrbJ 72488..73288 Rhizobium leguminosarum bv. trifolii WSM1325 8016795 YP_002978855.1 CDS Rleg_5487 NC_012853.1 73285 73434 D hypothetical protein 73285..73434 Rhizobium leguminosarum bv. trifolii WSM1325 8016796 YP_002978856.1 CDS Rleg_5488 NC_012853.1 73508 74656 D TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: atc:AGR_pTi_76 conjugal transfer protein TrbL; conjugal transfer protein TrbL 73508..74656 Rhizobium leguminosarum bv. trifolii WSM1325 8016797 YP_002978857.1 CDS Rleg_5489 NC_012853.1 74676 75338 D PFAM: Conjugal transfer protein; KEGG: ret:RHE_PA00172 conjugal transfer protein F; conjugal transfer protein TrbF 74676..75338 Rhizobium leguminosarum bv. trifolii WSM1325 8016798 YP_002978858.1 CDS Rleg_5490 NC_012853.1 75355 76176 D TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: trbG; P-type conjugative transfer protein TrbG ; K03204 type IV secretion system protein VirB9; conjugal transfer protein TrbG 75355..76176 Rhizobium leguminosarum bv. trifolii WSM1325 8016799 YP_002978859.1 CDS Rleg_5491 NC_012853.1 76179 76607 D KEGG: trbH; conjugal transfer protein; conjugal transfer protein TrbH 76179..76607 Rhizobium leguminosarum bv. trifolii WSM1325 8016800 YP_002978860.1 CDS Rleg_5492 NC_012853.1 76622 77902 D PFAM: conjugation TrbI family protein; KEGG: atc:AGR_pTi_71 conjugal transfer protein TrbI; conjugal transfer protein TrbI 76622..77902 Rhizobium leguminosarum bv. trifolii WSM1325 8016801 YP_002978861.1 CDS Rleg_5493 NC_012853.1 77928 78638 R PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: xau:Xaut_4889 autoinducer-binding domain-containing protein; transcriptional regulator, LuxR family complement(77928..78638) Rhizobium leguminosarum bv. trifolii WSM1325 8016802 YP_002978862.1 CDS Rleg_5495 NC_012853.1 79546 80628 D KEGG: vei:Veis_3722 hypothetical protein; hypothetical protein 79546..80628 Rhizobium leguminosarum bv. trifolii WSM1325 8016804 YP_002978863.1 CDS Rleg_5496 NC_012853.1 80625 81536 D KEGG: vei:Veis_3723 hypothetical protein; hypothetical protein 80625..81536 Rhizobium leguminosarum bv. trifolii WSM1325 8016805 YP_002978864.1 CDS Rleg_5497 NC_012853.1 82590 83249 R PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: mlo:mlr1334 two-component response regulator; two component transcriptional regulator, winged helix family complement(82590..83249) Rhizobium leguminosarum bv. trifolii WSM1325 8016806 YP_002978865.1 CDS Rleg_5498 NC_012853.1 84081 84653 D PFAM: transcriptional regulator domain protein; KEGG: mlo:mlr5913 phosphate regulatory protein; two component transcriptional regulator, winged helix family 84081..84653 Rhizobium leguminosarum bv. trifolii WSM1325 8016807 YP_002978866.1 CDS Rleg_5499 NC_012853.1 84643 86037 D PFAM: Amidohydrolase 3; KEGG: ilo:IL0605 hypothetical protein; Amidohydrolase 3 84643..86037 Rhizobium leguminosarum bv. trifolii WSM1325 8016808 YP_002978867.1 CDS Rleg_5500 NC_012853.1 86174 87535 R PFAM: MmgE/PrpD family protein; KEGG: mlo:mll9010 hypothetical protein; MmgE/PrpD family protein complement(86174..87535) Rhizobium leguminosarum bv. trifolii WSM1325 8016809 YP_002978868.1 CDS Rleg_5501 NC_012853.1 87552 88616 R PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: mxa:MXAN_7463 ornithine cyclodeaminase; ornithine cyclodeaminase/mu-crystallin complement(87552..88616) Rhizobium leguminosarum bv. trifolii WSM1325 8016810 YP_002978869.1 CDS Rleg_5502 NC_012853.1 88974 89837 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: oan:Oant_4151 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(88974..89837) Rhizobium leguminosarum bv. trifolii WSM1325 8016811 YP_002978870.1 CDS Rleg_5503 NC_012853.1 89834 90487 R KEGG: demethylmenaquinone methyltransferase protein; demethylmenaquinone methyltransferase protein complement(89834..90487) Rhizobium leguminosarum bv. trifolii WSM1325 8016394 YP_002978871.1 CDS Rleg_5504 NC_012853.1 90531 91397 R PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: ppu:PP_4466 TauD/TfdA family dioxygenase; Taurine catabolism dioxygenase TauD/TfdA complement(90531..91397) Rhizobium leguminosarum bv. trifolii WSM1325 8016395 YP_002978872.1 CDS Rleg_5505 NC_012853.1 91518 92606 R KEGG: scl:sce9306 spermidine/putrescine transport system ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(91518..92606) Rhizobium leguminosarum bv. trifolii WSM1325 8016396 YP_002978873.1 CDS Rleg_5506 NC_012853.1 92603 93406 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_5050 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(92603..93406) Rhizobium leguminosarum bv. trifolii WSM1325 8016397 YP_002978874.1 CDS Rleg_5507 NC_012853.1 93403 94302 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_5049 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(93403..94302) Rhizobium leguminosarum bv. trifolii WSM1325 8016398 YP_002978875.1 CDS Rleg_5508 NC_012853.1 94312 95355 R PFAM: extracellular solute-binding protein family 1; KEGG: xau:Xaut_0863 extracellular solute-binding protein; extracellular solute-binding protein family 1 complement(94312..95355) Rhizobium leguminosarum bv. trifolii WSM1325 8016399 YP_002978876.1 CDS Rleg_5509 NC_012853.1 95889 96521 D PFAM: protein of unknown function DUF433; KEGG: ret:RHE_PA00164 hypothetical protein; hypothetical protein 95889..96521 Rhizobium leguminosarum bv. trifolii WSM1325 8016400 YP_002978877.1 CDS Rleg_5510 NC_012853.1 96638 96895 D KEGG: ret:RHE_PA00163 hypothetical protein; hypothetical protein 96638..96895 Rhizobium leguminosarum bv. trifolii WSM1325 8016401 YP_002978878.1 CDS Rleg_5511 NC_012853.1 96911 97522 R PFAM: TraH_2 family protein; KEGG: ret:RHE_PA00162 conjugal transfer protein H; conjugal transfer protein TraH complement(96911..97522) Rhizobium leguminosarum bv. trifolii WSM1325 8016402 YP_002978879.1 CDS Rleg_5512 NC_012853.1 97538 98692 R PFAM: TraB family protein; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ret:RHE_PA00161 conjugal transfer protein B; conjugal transfer protein TraB complement(97538..98692) Rhizobium leguminosarum bv. trifolii WSM1325 8016403 YP_002978880.1 CDS Rleg_5513 NC_012853.1 98682 99248 R TIGRFAM: conjugative transfer signal peptidase TraF; KEGG: ret:RHE_PA00160 conjugal transfer protein F; conjugal transfer pilin processing protease TraF complement(98682..99248) Rhizobium leguminosarum bv. trifolii WSM1325 8016404 YP_002978881.1 CDS Rleg_5514 NC_012853.1 99245 102568 R conjugal transfer system TraA; oriT nicking enzyme; Dtr system oriT relaxase complement(99245..102568) Rhizobium leguminosarum bv. trifolii WSM1325 8016405 YP_002978882.1 CDS Rleg_5515 NC_012853.1 102823 103119 D PFAM: TraC family protein; KEGG: ret:RHE_PA00158 conjugal transfer protein C; TraC family protein 102823..103119 Rhizobium leguminosarum bv. trifolii WSM1325 8016406 YP_002978883.1 CDS Rleg_5516 NC_012853.1 103124 103339 D PFAM: Conjugal transfer TraD family protein; KEGG: traD; conjugal transfer protein Dtr system; Conjugal transfer TraD family protein 103124..103339 Rhizobium leguminosarum bv. trifolii WSM1325 8016407 YP_002978884.1 CDS Rleg_5517 NC_012853.1 103326 105323 D VirD4 family; conjugal transfer coupling protein TraG 103326..105323 Rhizobium leguminosarum bv. trifolii WSM1325 8016408 YP_002978885.1 CDS Rleg_5518 NC_012853.1 105681 105998 R hypothetical protein complement(105681..105998) Rhizobium leguminosarum bv. trifolii WSM1325 8016409 YP_002978886.1 CDS Rleg_5519 NC_012853.1 106460 106726 D PFAM: WGR domain protein; SMART: WGR domain protein; KEGG: hypothetical protein; WGR domain protein 106460..106726 Rhizobium leguminosarum bv. trifolii WSM1325 8016410 YP_002978887.1 CDS Rleg_5520 NC_012853.1 106996 107307 R PFAM: protein of unknown function DUF736; KEGG: hypothetical protein; hypothetical protein complement(106996..107307) Rhizobium leguminosarum bv. trifolii WSM1325 8016411 YP_002978888.1 CDS Rleg_5521 NC_012853.1 107455 108042 D hypothetical protein 107455..108042 Rhizobium leguminosarum bv. trifolii WSM1325 8016412 YP_002978889.1 CDS Rleg_5522 NC_012853.1 108249 109097 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: 2-hydroxyhepta-24-diene-1; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase complement(108249..109097) Rhizobium leguminosarum bv. trifolii WSM1325 8016413 YP_002978890.1 CDS Rleg_5523 NC_012853.1 109113 110006 R PFAM: Acetoacetate decarboxylase; KEGG: hypothetical protein; Acetoacetate decarboxylase complement(109113..110006) Rhizobium leguminosarum bv. trifolii WSM1325 8016414 YP_002978891.1 CDS Rleg_5524 NC_012853.1 110126 111682 R PFAM: monooxygenase FAD-binding; KEGG: bbt:BBta_5585 FAD-binding monooxygenase; monooxygenase FAD-binding complement(110126..111682) Rhizobium leguminosarum bv. trifolii WSM1325 8016415 YP_002978892.1 CDS Rleg_5525 NC_012853.1 111740 112639 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: oxidoreductase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(111740..112639) Rhizobium leguminosarum bv. trifolii WSM1325 8016416 YP_002978893.1 CDS Rleg_5526 NC_012853.1 112856 113464 R PFAM: Glutathione S-transferase domain; KEGG: attY; glutathione S-transferase; Glutathione S-transferase domain protein complement(112856..113464) Rhizobium leguminosarum bv. trifolii WSM1325 8016417 YP_002978894.1 CDS Rleg_5527 NC_012853.1 113501 113908 R PFAM: protein of unknown function DUF1486; KEGG: hypothetical protein; hypothetical protein complement(113501..113908) Rhizobium leguminosarum bv. trifolii WSM1325 8016418 YP_002978895.1 CDS Rleg_5528 NC_012853.1 113939 115318 R PFAM: Carbohydrate-selective porin OprB; KEGG: carbohydrate-selective porin ; K07267 porin; Carbohydrate-selective porin OprB complement(113939..115318) Rhizobium leguminosarum bv. trifolii WSM1325 8016419 YP_002978896.1 CDS Rleg_5529 NC_012853.1 115342 116667 R PFAM: major facilitator superfamily MFS_1; KEGG: MFS permease; major facilitator superfamily MFS_1 complement(115342..116667) Rhizobium leguminosarum bv. trifolii WSM1325 8016420 YP_002978897.1 CDS Rleg_5530 NC_012853.1 116724 118025 R PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: indole dioxygenase; Acyl-CoA dehydrogenase type 2 domain protein complement(116724..118025) Rhizobium leguminosarum bv. trifolii WSM1325 8016421 YP_002978898.1 CDS Rleg_5531 NC_012853.1 118071 118622 R PFAM: flavin reductase domain protein FMN-binding; KEGG: flavoprotein oxidoreductase; flavin reductase domain protein FMN-binding complement(118071..118622) Rhizobium leguminosarum bv. trifolii WSM1325 8016422 YP_002978899.1 CDS Rleg_5532 NC_012853.1 118782 119309 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: transcriptional regulator; transcriptional regulator, MarR family 118782..119309 Rhizobium leguminosarum bv. trifolii WSM1325 8016423 YP_002978900.1 CDS Rleg_5533 NC_012853.1 119672 120559 R PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bra:BRADO2272 catechol 1,2-dioxygenase; intradiol ring-cleavage dioxygenase complement(119672..120559) Rhizobium leguminosarum bv. trifolii WSM1325 8016424 YP_002978901.1 CDS Rleg_5534 NC_012853.1 120564 122318 R PFAM: monooxygenase FAD-binding; KEGG: bra:BRADO2271 2,4-dichlorophenol 6-monooxygenase (2, 4-dichlorophenol hydroxylase); monooxygenase FAD-binding complement(120564..122318) Rhizobium leguminosarum bv. trifolii WSM1325 8016425 YP_002978902.1 CDS Rleg_5535 NC_012853.1 122311 123396 R PFAM: inner-membrane translocator; KEGG: ABC transporter membrane spanning protein (branched chain amino acid) ; K01998 branched-chain amino acid transport system permease protein; inner-membrane translocator complement(122311..123396) Rhizobium leguminosarum bv. trifolii WSM1325 8016426 YP_002978903.1 CDS Rleg_5536 NC_012853.1 123406 124269 R PFAM: inner-membrane translocator; KEGG: ABC transporter membrane spanning protein (branched chain amino acid) ; K01997 branched-chain amino acid transport system permease protein; inner-membrane translocator complement(123406..124269) Rhizobium leguminosarum bv. trifolii WSM1325 8016427 YP_002978904.1 CDS Rleg_5537 NC_012853.1 124256 124975 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter ; K01996 branched-chain amino acid transport system ATP-binding protein; ABC transporter complement(124256..124975) Rhizobium leguminosarum bv. trifolii WSM1325 8016428 YP_002978905.1 CDS Rleg_5538 NC_012853.1 124975 125694 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter nucleotide binding/ATPase protein ; K01995 branched-chain amino acid transport system ATP-binding protein; ABC transporter complement(124975..125694) Rhizobium leguminosarum bv. trifolii WSM1325 8016429 YP_002978906.1 CDS Rleg_5539 NC_012853.1 125745 127025 R KEGG: ABC transporter substrate-binding protein ; K01999 branched-chain amino acid transport system substrate-binding protein; ABC transporter substrate-binding protein complement(125745..127025) Rhizobium leguminosarum bv. trifolii WSM1325 8016430 YP_002978907.1 CDS Rleg_5540 NC_012853.1 127080 128138 R PFAM: iron-containing alcohol dehydrogenase; KEGG: atc:AGR_C_4594 hypothetical protein; iron-containing alcohol dehydrogenase complement(127080..128138) Rhizobium leguminosarum bv. trifolii WSM1325 8016431 YP_002978908.1 CDS Rleg_5541 NC_012853.1 128135 128998 R PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bra:BRADO2264 catechol 1,2-dioxygenase; intradiol ring-cleavage dioxygenase complement(128135..128998) Rhizobium leguminosarum bv. trifolii WSM1325 8016432 YP_002978909.1 CDS Rleg_5542 NC_012853.1 129094 130044 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO2263 LysR family transcriptional regulator; LysR family transcriptional regulator 129094..130044 Rhizobium leguminosarum bv. trifolii WSM1325 8016433 YP_002978910.1 CDS Rleg_5543 NC_012853.1 130224 131144 R PFAM: domain of unknown function DUF1738; KEGG: rec:RHECIAT_PB0000154 probable DNA conjugal transfer antirestriction protein; hypothetical protein complement(130224..131144) Rhizobium leguminosarum bv. trifolii WSM1325 8016434 YP_002978911.1 CDS Rleg_5544 NC_012853.1 131822 132385 R KEGG: rec:RHECIAT_PC0000719 hypothetical protein; hypothetical protein complement(131822..132385) Rhizobium leguminosarum bv. trifolii WSM1325 8016435 YP_002978912.1 CDS Rleg_5545 NC_012853.1 132517 133086 R KEGG: ret:RHE_PD00012 hypothetical protein; hypothetical protein complement(132517..133086) Rhizobium leguminosarum bv. trifolii WSM1325 8016436 YP_002978913.1 CDS Rleg_5546 NC_012853.1 133491 134255 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pde:Pden_3439 two component transcriptional regulator, winged helix family; two component transcriptional regulator, winged helix family complement(133491..134255) Rhizobium leguminosarum bv. trifolii WSM1325 8016437 YP_002978914.1 CDS Rleg_5547 NC_012853.1 134543 135052 R PFAM: Invasion associated locus B family protein; KEGG: nwi:Nwi_0706 invasion associated locus B; Invasion associated locus B family protein complement(134543..135052) Rhizobium leguminosarum bv. trifolii WSM1325 8016438 YP_002978915.1 CDS Rleg_5548 NC_012853.1 135588 135944 R hypothetical protein complement(135588..135944) Rhizobium leguminosarum bv. trifolii WSM1325 8016439 YP_002978916.1 CDS Rleg_5549 NC_012853.1 136330 137868 R PFAM: type II and III secretion system protein; transport-associated; KEGG: rec:RHECIAT_CH0000250 pilus assembly secretion protein; type II and III secretion system protein complement(136330..137868) Rhizobium leguminosarum bv. trifolii WSM1325 8016440 YP_002978917.1 CDS Rleg_5550 NC_012853.1 137905 138531 R hypothetical protein complement(137905..138531) Rhizobium leguminosarum bv. trifolii WSM1325 8016441 YP_002978918.1 CDS Rleg_5551 NC_012853.1 138997 139782 R PFAM: protein of unknown function DUF72; KEGG: nis:NIS_1306 hypothetical protein; hypothetical protein complement(138997..139782) Rhizobium leguminosarum bv. trifolii WSM1325 8016442 YP_002978919.1 CDS Rleg_5552 NC_012853.1 140198 140404 R hypothetical protein complement(140198..140404) Rhizobium leguminosarum bv. trifolii WSM1325 8016443 YP_002978920.1 CDS Rleg_5553 NC_012853.1 140443 140901 R hypothetical protein complement(140443..140901) Rhizobium leguminosarum bv. trifolii WSM1325 8016444 YP_002978921.1 CDS Rleg_5554 NC_012853.1 141287 141766 R KEGG: hypothetical protein; hypothetical protein complement(141287..141766) Rhizobium leguminosarum bv. trifolii WSM1325 8016445 YP_002978922.1 CDS Rleg_5555 NC_012853.1 142141 142617 R PFAM: heat shock protein Hsp20; KEGG: rec:RHECIAT_PC0000697 probable small heat shock protein; heat shock protein Hsp20 complement(142141..142617) Rhizobium leguminosarum bv. trifolii WSM1325 8016446 YP_002978923.1 CDS Rleg_5556 NC_012853.1 142863 143189 D KEGG: ret:RHE_CH01240 hypothetical protein; hypothetical protein 142863..143189 Rhizobium leguminosarum bv. trifolii WSM1325 8016447 YP_002978924.1 CDS Rleg_5557 NC_012853.1 143202 143501 D hypothetical protein 143202..143501 Rhizobium leguminosarum bv. trifolii WSM1325 8016448 YP_002978925.1 CDS Rleg_5558 NC_012853.1 143780 144091 R PFAM: protein of unknown function DUF982; KEGG: ret:RHE_PE00253 hypothetical protein; hypothetical protein complement(143780..144091) Rhizobium leguminosarum bv. trifolii WSM1325 8016449 YP_002978926.1 CDS Rleg_5559 NC_012853.1 144225 145253 R KEGG: cak:Caul_3297 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; PAS domain containing protein; hypothetical protein complement(144225..145253) Rhizobium leguminosarum bv. trifolii WSM1325 8016450 YP_002978927.1 CDS Rleg_5560 NC_012853.1 145449 146474 D KEGG: rec:RHECIAT_PB0000073 probable two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; signal transduction histidine kinase 145449..146474 Rhizobium leguminosarum bv. trifolii WSM1325 8016451 YP_002978928.1 CDS Rleg_5561 NC_012853.1 147898 149067 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_PC0000303 alcohol dehydrogenase protein; Alcohol dehydrogenase GroES domain protein complement(147898..149067) Rhizobium leguminosarum bv. trifolii WSM1325 8016452 YP_002978929.1 CDS Rleg_5562 NC_012853.1 149295 149822 D KEGG: ret:RHE_PB00040 hypothetical protein; hypothetical protein 149295..149822 Rhizobium leguminosarum bv. trifolii WSM1325 8016453 YP_002978930.1 CDS Rleg_5563 NC_012853.1 149950 150210 D hypothetical protein 149950..150210 Rhizobium leguminosarum bv. trifolii WSM1325 8016454 YP_002978931.1 CDS Rleg_5564 NC_012853.1 150290 150592 R hypothetical protein complement(150290..150592) Rhizobium leguminosarum bv. trifolii WSM1325 8016455 YP_002978932.1 CDS Rleg_5565 NC_012853.1 150592 150891 R KEGG: rec:RHECIAT_CH0002822 hypothetical protein; hypothetical protein complement(150592..150891) Rhizobium leguminosarum bv. trifolii WSM1325 8016456 YP_002978933.1 CDS Rleg_5566 NC_012853.1 151145 151516 D KEGG: ret:RHE_PF00063 hypothetical protein; hypothetical protein 151145..151516 Rhizobium leguminosarum bv. trifolii WSM1325 8016457 YP_002978934.1 CDS Rleg_5567 NC_012853.1 151612 151839 D KEGG: ret:RHE_PF00062 hypothetical protein; hypothetical protein 151612..151839 Rhizobium leguminosarum bv. trifolii WSM1325 8016458 YP_002978935.1 CDS Rleg_5568 NC_012853.1 151873 152592 R SMART: regulatory protein Crp; KEGG: rec:RHECIAT_PC0000048 hypothetical protein; transcriptional regulator, Crp/Fnr family complement(151873..152592) Rhizobium leguminosarum bv. trifolii WSM1325 8016459 YP_002978936.1 CDS Rleg_5569 NC_012853.1 153277 153696 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ret:RHE_PF00120 two-component response regulator protein; response regulator receiver protein 153277..153696 Rhizobium leguminosarum bv. trifolii WSM1325 8016460 YP_002978937.1 CDS Rleg_5570 NC_012853.1 153756 153908 D hypothetical protein 153756..153908 Rhizobium leguminosarum bv. trifolii WSM1325 8016461 YP_002978938.1 CDS Rleg_5571 NC_012853.1 153908 154078 D KEGG: ret:RHE_PF00054 hypothetical protein; hypothetical protein 153908..154078 Rhizobium leguminosarum bv. trifolii WSM1325 8016462 YP_002978939.1 CDS Rleg_5572 NC_012853.1 154202 156004 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: smd:Smed_4042 thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein domain protein TPP-binding 154202..156004 Rhizobium leguminosarum bv. trifolii WSM1325 8016463 YP_002978940.1 CDS Rleg_5573 NC_012853.1 156145 156330 D KEGG: rec:RHECIAT_PC0000288 diheme cytochrome c-type signal-peptide protein; diheme cytochrome c-type signal-peptide protein 156145..156330 Rhizobium leguminosarum bv. trifolii WSM1325 8016464 YP_002978941.1 CDS Rleg_5575 NC_012853.1 157028 157582 R PFAM: protein of unknown function DUF1003; KEGG: smd:Smed_3877 protein of unknown function DUF1003; hypothetical protein complement(157028..157582) Rhizobium leguminosarum bv. trifolii WSM1325 8016466 YP_002978942.1 CDS Rleg_5576 NC_012853.1 157659 157922 R hypothetical protein complement(157659..157922) Rhizobium leguminosarum bv. trifolii WSM1325 8016467 YP_002978943.1 CDS Rleg_5577 NC_012853.1 158035 159063 R PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: ret:RHE_PB00050 oxidoreductase protein; oxidoreductase domain protein complement(158035..159063) Rhizobium leguminosarum bv. trifolii WSM1325 8016468 YP_002978944.1 CDS Rleg_5578 NC_012853.1 159057 160043 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ret:RHE_PB00051 oxidoreductase protein; Alcohol dehydrogenase GroES domain protein complement(159057..160043) Rhizobium leguminosarum bv. trifolii WSM1325 8016469 YP_002978945.1 CDS Rleg_5579 NC_012853.1 160276 161382 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KR domain protein; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_PC0000296 probable UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase 160276..161382 Rhizobium leguminosarum bv. trifolii WSM1325 8016470 YP_002978946.1 CDS Rleg_5580 NC_012853.1 161379 163421 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_PC0000295 probable nucleoside diphosphate epimerase protein; NAD-dependent epimerase/dehydratase 161379..163421 Rhizobium leguminosarum bv. trifolii WSM1325 8016471 YP_002978947.1 CDS Rleg_5581 NC_012853.1 163418 164524 D PFAM: glycosyl transferase group 1; KEGG: smd:Smed_3889 glycosyl transferase group 1; glycosyl transferase group 1 163418..164524 Rhizobium leguminosarum bv. trifolii WSM1325 8016472 YP_002978948.1 CDS Rleg_5582 NC_012853.1 164521 165651 D KEGG: ret:RHE_PB00055 hypothetical protein; hypothetical protein 164521..165651 Rhizobium leguminosarum bv. trifolii WSM1325 8016473 YP_002978949.1 CDS Rleg_5583 NC_012853.1 165648 166736 D KEGG: ret:RHE_PB00056 hypothetical protein; hypothetical protein 165648..166736 Rhizobium leguminosarum bv. trifolii WSM1325 8016474 YP_002978950.1 CDS Rleg_5584 NC_012853.1 166733 167863 D KEGG: rec:RHECIAT_PC0000291 hypothetical protein; hypothetical protein 166733..167863 Rhizobium leguminosarum bv. trifolii WSM1325 8016475 YP_002978951.1 CDS Rleg_5585 NC_012853.1 167863 168918 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ret:RHE_PB00058 dTDP-glucose 4,6-dehydratase protein; NAD-dependent epimerase/dehydratase 167863..168918 Rhizobium leguminosarum bv. trifolii WSM1325 8016476 YP_002978952.1 CDS Rleg_5586 NC_012853.1 168952 169713 D PFAM: Methyltransferase type 11; methyltransferase ; Methyltransferase type 12; KEGG: rec:RHECIAT_PC0000289 methyltransferase protein; Methyltransferase type 11 168952..169713 Rhizobium leguminosarum bv. trifolii WSM1325 8016812 YP_002978953.1 CDS Rleg_5587 NC_012853.1 169756 171153 R KEGG: ret:RHE_PF00053 hypothetical protein; hypothetical protein complement(169756..171153) Rhizobium leguminosarum bv. trifolii WSM1325 8016813 YP_002978954.1 CDS Rleg_5588 NC_012853.1 171327 172427 D KEGG: rec:RHECIAT_PC0000523 hypothetical protein; hypothetical protein 171327..172427 Rhizobium leguminosarum bv. trifolii WSM1325 8016814 YP_002978955.1 CDS Rleg_5589 NC_012853.1 172551 172673 D hypothetical protein 172551..172673 Rhizobium leguminosarum bv. trifolii WSM1325 8016815 YP_002978956.1 CDS Rleg_5590 NC_012853.1 172704 173504 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_PC0000304 oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(172704..173504) Rhizobium leguminosarum bv. trifolii WSM1325 8016816 YP_002978957.1 CDS Rleg_5591 NC_012853.1 173711 174232 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rec:RHECIAT_PC0000039 probable RNA polymerase sigma-E factor protein (sigma-24), ECF family; RNA polymerase, sigma-24 subunit, ECF subfamily complement(173711..174232) Rhizobium leguminosarum bv. trifolii WSM1325 8016817 YP_002978958.1 CDS Rleg_5592 NC_012853.1 174691 175191 D PFAM: protein of unknown function DUF892; KEGG: rec:RHECIAT_PC0000038 hypothetical protein; hypothetical protein 174691..175191 Rhizobium leguminosarum bv. trifolii WSM1325 8016818 YP_002978959.1 CDS Rleg_5593 NC_012853.1 175298 175537 D KEGG: rec:RHECIAT_PC0000280 hypothetical protein; hypothetical protein 175298..175537 Rhizobium leguminosarum bv. trifolii WSM1325 8016819 YP_002978960.1 CDS Rleg_5594 NC_012853.1 176149 176451 D KEGG: ret:RHE_CH01080 hypothetical protein; hypothetical protein 176149..176451 Rhizobium leguminosarum bv. trifolii WSM1325 8016820 YP_002978961.1 CDS Rleg_5595 NC_012853.1 176467 177561 D KEGG: ret:RHE_CH01081 hypothetical protein; hypothetical protein 176467..177561 Rhizobium leguminosarum bv. trifolii WSM1325 8016821 YP_002978962.1 CDS Rleg_5596 NC_012853.1 177930 178112 R hypothetical protein complement(177930..178112) Rhizobium leguminosarum bv. trifolii WSM1325 8016822 YP_002978963.1 CDS Rleg_5597 NC_012853.1 178752 178991 D KEGG: rec:RHECIAT_PC0000053 hypothetical protein; hypothetical protein 178752..178991 Rhizobium leguminosarum bv. trifolii WSM1325 8016823 YP_002978964.1 CDS Rleg_5598 NC_012853.1 178993 179712 R KEGG: rec:RHECIAT_PC0000054 hypothetical protein; transcriptional regulator, Crp/Fnr family complement(178993..179712) Rhizobium leguminosarum bv. trifolii WSM1325 8016824 YP_002978965.1 CDS Rleg_5599 NC_012853.1 180005 180169 R hypothetical protein complement(180005..180169) Rhizobium leguminosarum bv. trifolii WSM1325 8016825 YP_002978966.1 CDS Rleg_5600 NC_012853.1 181136 182101 D KEGG: dehydrogenase/flavin-dependent oxidoreductase protein; dehydrogenase/flavin-dependent oxidoreductase protein 181136..182101 Rhizobium leguminosarum bv. trifolii WSM1325 8016826 YP_002978967.1 CDS Rleg_5601 NC_012853.1 182210 182530 R KEGG: ret:RHE_PF00044 hypothetical protein; SNP /replace=G; hypothetical protein complement(182210..182530) Rhizobium leguminosarum bv. trifolii WSM1325 8016827 YP_002978968.1 CDS Rleg_5602 NC_012853.1 183029 183433 R KEGG: mlo:mlr7120 AgaE protein, conversion of agropinic acid to mannopinic acid; AgaE protein, conversion of agropinic acid to mannopinic acid complement(183029..183433) Rhizobium leguminosarum bv. trifolii WSM1325 8016828 YP_002978969.1 CDS Rleg_5603 NC_012853.1 183650 186949 R KEGG: dnaE; DNA polymerase III alpha chain ; K02337 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III, alpha subunit complement(183650..186949) Rhizobium leguminosarum bv. trifolii WSM1325 8016829 YP_002978970.1 CDS Rleg_5604 NC_012853.1 186946 188457 R KEGG: rec:RHECIAT_CH0003329 hypothetical protein; hypothetical protein complement(186946..188457) Rhizobium leguminosarum bv. trifolii WSM1325 8016830 YP_002978971.1 CDS Rleg_5605 NC_012853.1 188378 189136 R KEGG: hypothetical protein; hypothetical protein complement(188378..189136) Rhizobium leguminosarum bv. trifolii WSM1325 8016831 YP_002978972.1 CDS Rleg_5607 NC_012853.1 189654 190091 D KEGG: rec:RHECIAT_PC0000606 hypothetical protein; hypothetical protein 189654..190091 Rhizobium leguminosarum bv. trifolii WSM1325 8016833 YP_002978973.1 CDS Rleg_5608 NC_012853.1 190091 191668 D KEGG: ret:RHE_CH02735 L-sorbosone dehydrogenase protein; L-sorbosone dehydrogenase protein 190091..191668 Rhizobium leguminosarum bv. trifolii WSM1325 8016834 YP_002978974.1 CDS Rleg_5609 NC_012853.1 191899 193065 D PFAM: glycosyl transferase group 1; KEGG: smd:Smed_5684 glycosyl transferase group 1; glycosyl transferase group 1 191899..193065 Rhizobium leguminosarum bv. trifolii WSM1325 8016835 YP_002978975.1 CDS Rleg_5610 NC_012853.1 193131 195482 D KEGG: smd:Smed_5685 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase 193131..195482 Rhizobium leguminosarum bv. trifolii WSM1325 8016836 YP_002978976.1 CDS Rleg_5611 NC_012853.1 195475 198714 D PFAM: glycosyl transferase group 1; oxidoreductase domain protein; Oxidoreductase domain; Alcohol dehydrogenase zinc-binding domain protein; KEGG: smd:Smed_5686 glycosyl transferase group 1; glycosyl transferase group 1 195475..198714 Rhizobium leguminosarum bv. trifolii WSM1325 8016837 YP_002978977.1 CDS Rleg_5612 NC_012853.1 198711 201002 D PFAM: glycosyl transferase group 1; KEGG: smd:Smed_5687 glycosyl transferase group 1; glycosyl transferase group 1 198711..201002 Rhizobium leguminosarum bv. trifolii WSM1325 8016838 YP_002978978.1 CDS Rleg_5613 NC_012853.1 201158 202024 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_pAT_398 hypothetical oxidoreductase IN CITA-SSPB intergenic region; short-chain dehydrogenase/reductase SDR 201158..202024 Rhizobium leguminosarum bv. trifolii WSM1325 8016839 YP_002978979.1 CDS Rleg_5614 NC_012853.1 202091 202597 R PFAM: protein of unknown function DUF892; KEGG: rec:RHECIAT_PC0000038 hypothetical protein; hypothetical protein complement(202091..202597) Rhizobium leguminosarum bv. trifolii WSM1325 8016840 YP_002978980.1 CDS Rleg_5616 NC_012853.1 203346 203714 R KEGG: rec:RHECIAT_CH0001318 hypothetical protein; hypothetical protein complement(203346..203714) Rhizobium leguminosarum bv. trifolii WSM1325 8016842 YP_002978981.1 CDS Rleg_5617 NC_012853.1 203874 204371 D KEGG: ret:RHE_PF00059 hypothetical protein; hypothetical protein 203874..204371 Rhizobium leguminosarum bv. trifolii WSM1325 8016843 YP_002978982.1 CDS Rleg_5618 NC_012853.1 204577 205191 R PFAM: protein of unknown function DUF1470; KEGG: rec:RHECIAT_PC0000141 hypothetical protein; hypothetical protein complement(204577..205191) Rhizobium leguminosarum bv. trifolii WSM1325 8016844 YP_002978983.1 CDS Rleg_5619 NC_012853.1 205283 206329 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_PC0000142 hypothetical conserved membrane protein; hypothetical protein 205283..206329 Rhizobium leguminosarum bv. trifolii WSM1325 8016845 YP_002978984.1 CDS Rleg_5620 NC_012853.1 206429 206998 D KEGG: ret:RHE_CH01082 nutrient deprivation-induced protein; nutrient deprivation-induced protein 206429..206998 Rhizobium leguminosarum bv. trifolii WSM1325 8016846 YP_002978985.1 CDS Rleg_5621 NC_012853.1 206991 207407 D PFAM: protein of unknown function DUF1469; KEGG: ret:RHE_CH01083 nutrient deprivation-induced protein; hypothetical protein 206991..207407 Rhizobium leguminosarum bv. trifolii WSM1325 8016847 YP_002978986.1 CDS Rleg_5622 NC_012853.1 207407 208405 D KEGG: ret:RHE_CH01084 nutrient deprivation-induced protein; nutrient deprivation-induced protein 207407..208405 Rhizobium leguminosarum bv. trifolii WSM1325 8016848 YP_002978987.1 CDS Rleg_5625 NC_012853.1 209387 209614 D hypothetical protein 209387..209614 Rhizobium leguminosarum bv. trifolii WSM1325 8016851 YP_002978988.1 CDS Rleg_5626 NC_012853.1 210455 210700 D KEGG: rec:RHECIAT_CH0003150 hypothetical protein; hypothetical protein 210455..210700 Rhizobium leguminosarum bv. trifolii WSM1325 8016852 YP_002978989.1 CDS Rleg_5627 NC_012853.1 210870 211013 R hypothetical protein complement(210870..211013) Rhizobium leguminosarum bv. trifolii WSM1325 8016853 YP_002978990.1 CDS Rleg_5628 NC_012853.1 211133 211378 R PFAM: protein of unknown function DUF982; KEGG: smd:Smed_4387 protein of unknown function DUF982; hypothetical protein complement(211133..211378) Rhizobium leguminosarum bv. trifolii WSM1325 8016854 YP_002978991.1 CDS Rleg_5630 NC_012853.1 212837 213868 D KEGG: bbt:BBta_6062 hypothetical protein; hypothetical protein 212837..213868 Rhizobium leguminosarum bv. trifolii WSM1325 8016856 YP_002978992.1 CDS Rleg_5631 NC_012853.1 213919 216633 D KEGG: bja:bll6124 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE2 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with Chase sensor 213919..216633 Rhizobium leguminosarum bv. trifolii WSM1325 8016857 YP_002978993.1 CDS Rleg_5633 NC_012853.1 218307 218918 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rec:RHECIAT_CH0001812 probable two-component response regulator protein; two component transcriptional regulator, LuxR family 218307..218918 Rhizobium leguminosarum bv. trifolii WSM1325 8016859 YP_002978994.1 CDS Rleg_5634 NC_012853.1 219065 220180 D PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_A1897 major facilitator transporter; major facilitator superfamily MFS_1 219065..220180 Rhizobium leguminosarum bv. trifolii WSM1325 8016860 YP_002978995.1 CDS Rleg_5635 NC_012853.1 220462 220773 R hypothetical protein complement(220462..220773) Rhizobium leguminosarum bv. trifolii WSM1325 8016861 YP_002978996.1 CDS Rleg_5636 NC_012853.1 221501 221659 R hypothetical protein complement(221501..221659) Rhizobium leguminosarum bv. trifolii WSM1325 8016862 YP_002978997.1 CDS ligD NC_012853.1 222642 225290 R catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase complement(222642..225290) Rhizobium leguminosarum bv. trifolii WSM1325 8016864 YP_002978998.1 CDS Rleg_5639 NC_012853.1 225314 225622 R KEGG: smd:Smed_5311 hypothetical protein; hypothetical protein complement(225314..225622) Rhizobium leguminosarum bv. trifolii WSM1325 8016865 YP_002978999.1 CDS Rleg_5641 NC_012853.1 226656 227129 D PFAM: heat shock protein Hsp20; KEGG: atc:AGR_pAT_69 small heat shock protein HspB; heat shock protein Hsp20 226656..227129 Rhizobium leguminosarum bv. trifolii WSM1325 8016867 YP_002979000.1 CDS Rleg_5642 NC_012853.1 227199 227498 D PFAM: protein of unknown function DUF982; KEGG: atu:Atu5053 hypothetical protein; hypothetical protein 227199..227498 Rhizobium leguminosarum bv. trifolii WSM1325 8016868 YP_002979001.1 CDS Rleg_5643 NC_012853.1 227508 227786 D KEGG: atc:AGR_pAT_73 hypothetical protein; hypothetical protein 227508..227786 Rhizobium leguminosarum bv. trifolii WSM1325 8016869 YP_002979002.1 CDS Rleg_5644 NC_012853.1 227917 228069 D hypothetical protein 227917..228069 Rhizobium leguminosarum bv. trifolii WSM1325 8016870 YP_002979003.1 CDS Rleg_5645 NC_012853.1 228297 228845 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rpb:RPB_4041 response regulator receiver domain-containing protein; response regulator receiver protein complement(228297..228845) Rhizobium leguminosarum bv. trifolii WSM1325 8016871 YP_002979004.1 CDS Rleg_5646 NC_012853.1 229062 229538 D hypothetical protein 229062..229538 Rhizobium leguminosarum bv. trifolii WSM1325 8016872 YP_002979005.1 CDS Rleg_5647 NC_012853.1 229835 230020 D hypothetical protein 229835..230020 Rhizobium leguminosarum bv. trifolii WSM1325 8016873 YP_002979006.1 CDS Rleg_5649 NC_012853.1 230345 230563 D KEGG: gbe:GbCGDNIH1_2332 sensory transduction protein kinase; response regulator receiver protein 230345..230563 Rhizobium leguminosarum bv. trifolii WSM1325 8016875 YP_002979007.1 CDS Rleg_5650 NC_012853.1 230604 230990 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0003075 probable two-component response regulator protein; response regulator receiver protein complement(230604..230990) Rhizobium leguminosarum bv. trifolii WSM1325 8016876 YP_002979008.1 CDS Rleg_5651 NC_012853.1 231214 231342 R hypothetical protein complement(231214..231342) Rhizobium leguminosarum bv. trifolii WSM1325 8016877 YP_002979009.1 CDS Rleg_5652 NC_012853.1 231952 232575 D PFAM: porin; KEGG: rec:RHECIAT_CH0002083 outer membrane protein; porin 231952..232575 Rhizobium leguminosarum bv. trifolii WSM1325 8016878 YP_002979010.1 CDS Rleg_5654 NC_012853.1 234039 234275 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mlo:msr0960 hypothetical protein; XRE family transcriptional regulator 234039..234275 Rhizobium leguminosarum bv. trifolii WSM1325 8016880 YP_002979011.1 CDS Rleg_5656 NC_012853.1 234845 235333 R KEGG: ypk:y3376 hypothetical protein; peptidase-like protein complement(234845..235333) Rhizobium leguminosarum bv. trifolii WSM1325 8016882 YP_002979012.1 CDS Rleg_5658 NC_012853.1 235600 236781 R PFAM: Patatin; KEGG: hypothetical protein; Patatin complement(235600..236781) Rhizobium leguminosarum bv. trifolii WSM1325 8016884 YP_002979013.1 CDS Rleg_5659 NC_012853.1 236797 239865 R PFAM: acriflavin resistance protein; KEGG: Acr family transporter; acriflavin resistance protein complement(236797..239865) Rhizobium leguminosarum bv. trifolii WSM1325 8016885 YP_002979014.1 CDS Rleg_5660 NC_012853.1 239862 240977 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: HlyD family secretion protein; efflux transporter, RND family, MFP subunit complement(239862..240977) Rhizobium leguminosarum bv. trifolii WSM1325 8016886 YP_002979015.1 CDS Rleg_5661 NC_012853.1 240977 242401 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: nodT; nodulation protein T precursor; RND efflux system, outer membrane lipoprotein, NodT family complement(240977..242401) Rhizobium leguminosarum bv. trifolii WSM1325 8016887 YP_002979016.1 CDS Rleg_5662 NC_012853.1 242549 243112 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: two-component response regulator protein ; K07662 two-component system, OmpR family, response regulator CpxR; response regulator receiver protein 242549..243112 Rhizobium leguminosarum bv. trifolii WSM1325 8016888 YP_002979017.1 CDS Rleg_5663 NC_012853.1 243196 243324 R hypothetical protein complement(243196..243324) Rhizobium leguminosarum bv. trifolii WSM1325 8016889 YP_002979018.1 CDS Rleg_5664 NC_012853.1 243321 243911 R KEGG: rru:Rru_A2948 hypothetical protein; hypothetical protein complement(243321..243911) Rhizobium leguminosarum bv. trifolii WSM1325 8016890 YP_002979019.1 CDS Rleg_5665 NC_012853.1 243901 244197 R KEGG: sme:SMa1706 hypothetical protein; hypothetical protein complement(243901..244197) Rhizobium leguminosarum bv. trifolii WSM1325 8016891 YP_002979020.1 CDS Rleg_5666 NC_012853.1 244298 244681 R hypothetical protein complement(244298..244681) Rhizobium leguminosarum bv. trifolii WSM1325 8016892 YP_002979021.1 CDS Rleg_5667 NC_012853.1 245287 246189 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_41911 transcriptional regulator; LysR family transcriptional regulator 245287..246189 Rhizobium leguminosarum bv. trifolii WSM1325 8016893 YP_002979022.1 CDS Rleg_5668 NC_012853.1 246309 247205 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: galE; UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 246309..247205 Rhizobium leguminosarum bv. trifolii WSM1325 8016894 YP_002979023.1 CDS Rleg_5669 NC_012853.1 247258 248226 D PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_4529 aldo/keto reductase; aldo/keto reductase 247258..248226 Rhizobium leguminosarum bv. trifolii WSM1325 8016895 YP_002979024.1 CDS Rleg_5670 NC_012853.1 248411 249442 D PFAM: aldo/keto reductase; KEGG: ret:RHE_PE00404 oxidoreductase protein; aldo/keto reductase 248411..249442 Rhizobium leguminosarum bv. trifolii WSM1325 8016896 YP_002979025.1 CDS Rleg_5672 NC_012853.1 250061 250900 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_5930 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(250061..250900) Rhizobium leguminosarum bv. trifolii WSM1325 8016898 YP_002979026.1 CDS Rleg_5673 NC_012853.1 251020 252327 D PFAM: extracellular solute-binding protein family 1; KEGG: bacterial extracellular solute-binding protein; extracellular solute-binding protein family 1 251020..252327 Rhizobium leguminosarum bv. trifolii WSM1325 8016899 YP_002979027.1 CDS Rleg_5674 NC_012853.1 252327 253286 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: malF; ABC transporter membrane spanning protein (maltose); binding-protein-dependent transport systems inner membrane component 252327..253286 Rhizobium leguminosarum bv. trifolii WSM1325 8016900 YP_002979028.1 CDS Rleg_5675 NC_012853.1 253283 254104 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aglG; ABC transporter membrane spanning protein ; K02026 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component 253283..254104 Rhizobium leguminosarum bv. trifolii WSM1325 8016901 YP_002979029.1 CDS Rleg_5676 NC_012853.1 254109 256160 D KEGG: hypothetical protein; hypothetical protein 254109..256160 Rhizobium leguminosarum bv. trifolii WSM1325 8016902 YP_002979030.1 CDS Rleg_5677 NC_012853.1 256160 257335 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: transcriptional regulator LacI family ; K02529 LacI family transcriptional regulator; transcriptional regulator, LacI family 256160..257335 Rhizobium leguminosarum bv. trifolii WSM1325 8016640 YP_002979031.1 CDS Rleg_5678 NC_012853.1 257373 258470 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: smd:Smed_4163 ABC transporter related; ABC transporter 257373..258470 Rhizobium leguminosarum bv. trifolii WSM1325 8016641 YP_002979032.1 CDS Rleg_5679 NC_012853.1 258473 260716 D KEGG: hypothetical protein; Alpha-L-fucosidase 258473..260716 Rhizobium leguminosarum bv. trifolii WSM1325 8016642 YP_002979033.1 CDS Rleg_5680 NC_012853.1 261221 262006 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR precursor ; K00059 3-oxoacyl-; short-chain dehydrogenase/reductase SDR complement(261221..262006) Rhizobium leguminosarum bv. trifolii WSM1325 8016643 YP_002979034.1 CDS Rleg_5681 NC_012853.1 262053 262826 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_4370 dehydrogenase; short-chain dehydrogenase/reductase SDR complement(262053..262826) Rhizobium leguminosarum bv. trifolii WSM1325 8016644 YP_002979035.1 CDS Rleg_5682 NC_012853.1 262837 264171 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bcs:BCAN_A0681 dihydroorotase; amidohydrolase complement(262837..264171) Rhizobium leguminosarum bv. trifolii WSM1325 8016645 YP_002979036.1 CDS Rleg_5683 NC_012853.1 264189 265880 R PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bbr:BB0539 hypothetical protein; hypothetical protein complement(264189..265880) Rhizobium leguminosarum bv. trifolii WSM1325 8016646 YP_002979037.1 CDS Rleg_5684 NC_012853.1 265873 266781 R PFAM: polysaccharide deacetylase; KEGG: bbr:BB0695 polysaccharide deacetylase; Chitin deacetylase complement(265873..266781) Rhizobium leguminosarum bv. trifolii WSM1325 8016647 YP_002979038.1 CDS Rleg_5685 NC_012853.1 266781 267818 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_4371 short-chain dehydrogenase; NAD-dependent epimerase/dehydratase complement(266781..267818) Rhizobium leguminosarum bv. trifolii WSM1325 8016648 YP_002979039.1 CDS Rleg_5686 NC_012853.1 267853 268614 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bav:BAV0621 short chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(267853..268614) Rhizobium leguminosarum bv. trifolii WSM1325 8016649 YP_002979040.1 CDS Rleg_5687 NC_012853.1 268611 270044 R TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: reh:H16_A3075 D-hydantoinase; dihydropyrimidinase complement(268611..270044) Rhizobium leguminosarum bv. trifolii WSM1325 8016650 YP_002979041.1 CDS Rleg_5688 NC_012853.1 270041 271297 R PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A0226 major facilitator transporter; major facilitator superfamily MFS_1 complement(270041..271297) Rhizobium leguminosarum bv. trifolii WSM1325 8016651 YP_002979042.1 CDS Rleg_5689 NC_012853.1 271300 273390 R KEGG: sil:SPO3046 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMC domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase complement(271300..273390) Rhizobium leguminosarum bv. trifolii WSM1325 8016652 YP_002979043.1 CDS Rleg_5690 NC_012853.1 273387 274262 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppCf; dipeptide ABC transporter ; K02034 peptide/nickel transport system permease protein; binding-protein-dependent transport systems inner membrane component complement(273387..274262) Rhizobium leguminosarum bv. trifolii WSM1325 8016653 YP_002979044.1 CDS Rleg_5691 NC_012853.1 274266 275279 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1659 permease protein of oligopeptide ABC transporter; binding-protein-dependent transport systems inner membrane component complement(274266..275279) Rhizobium leguminosarum bv. trifolii WSM1325 8016654 YP_002979045.1 CDS Rleg_5692 NC_012853.1 275350 277017 R PFAM: extracellular solute-binding protein family 5; KEGG: mlo:mlr8282 hypothetical protein; extracellular solute-binding protein family 5 complement(275350..277017) Rhizobium leguminosarum bv. trifolii WSM1325 8016655 YP_002979046.1 CDS Rleg_5693 NC_012853.1 277212 278222 R PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rde:RD1_2634 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(277212..278222) Rhizobium leguminosarum bv. trifolii WSM1325 8016656 YP_002979047.1 CDS Rleg_5694 NC_012853.1 278623 278865 R KEGG: hypothetical protein; hypothetical protein complement(278623..278865) Rhizobium leguminosarum bv. trifolii WSM1325 8016657 YP_002979048.1 CDS Rleg_5695 NC_012853.1 278953 280050 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mlr7095 sugar ABC transporter, ATP-binding protein; ABC transporter complement(278953..280050) Rhizobium leguminosarum bv. trifolii WSM1325 8016658 YP_002979049.1 CDS Rleg_5696 NC_012853.1 280060 280911 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7094 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(280060..280911) Rhizobium leguminosarum bv. trifolii WSM1325 8016659 YP_002979050.1 CDS Rleg_5697 NC_012853.1 280908 281825 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7093 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(280908..281825) Rhizobium leguminosarum bv. trifolii WSM1325 8016660 YP_002979051.1 CDS Rleg_5698 NC_012853.1 281885 283123 R PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mlr7091 sugar ABC transporter, periplasmic binding protein; extracellular solute-binding protein family 1 complement(281885..283123) Rhizobium leguminosarum bv. trifolii WSM1325 8016661 YP_002979052.1 CDS Rleg_5699 NC_012853.1 283228 283923 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mlo:mlr7090 transcriptional regulator; GntR family transcriptional regulator complement(283228..283923) Rhizobium leguminosarum bv. trifolii WSM1325 8016662 YP_002979053.1 CDS Rleg_5700 NC_012853.1 283985 285133 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mlo:mll7089 mandelate racemase; Mandelate racemase/muconate lactonizing protein 283985..285133 Rhizobium leguminosarum bv. trifolii WSM1325 8016663 YP_002979054.1 CDS Rleg_5702 NC_012853.1 285684 286145 R PFAM: TspO/MBR family protein; KEGG: tspO; tryptophan-rich sensory protein ; K07185 tryptophan-rich sensory protein; TspO and MBR like protein complement(285684..286145) Rhizobium leguminosarum bv. trifolii WSM1325 8016665 YP_002979055.1 CDS Rleg_5703 NC_012853.1 286333 287220 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B1289 transcriptional regulator, LysR family; LysR family transcriptional regulator 286333..287220 Rhizobium leguminosarum bv. trifolii WSM1325 8016666 YP_002979056.1 CDS Rleg_5705 NC_012853.1 287440 287997 R KEGG: mpt:Mpe_A3666 hypothetical protein; hypothetical protein complement(287440..287997) Rhizobium leguminosarum bv. trifolii WSM1325 8016668 YP_002979057.1 CDS Rleg_5706 NC_012853.1 288049 289488 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bja:bll3347 hypothetical protein; SNP /replace=C; permease for cytosine/purines uracil thiamine allantoin complement(288049..289488) Rhizobium leguminosarum bv. trifolii WSM1325 8016669 YP_002979058.1 CDS Rleg_5707 NC_012853.1 289776 290441 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cps:CPS_2972 FMN-dependent NADH-azoreductase; NAD(P)H dehydrogenase (quinone) 289776..290441 Rhizobium leguminosarum bv. trifolii WSM1325 8016670 YP_002979059.1 CDS Rleg_5708 NC_012853.1 290459 291802 D PFAM: Amidase; KEGG: pfl:PFL_1361 hypothetical protein; Amidase 290459..291802 Rhizobium leguminosarum bv. trifolii WSM1325 8016671 YP_002979060.1 CDS Rleg_5709 NC_012853.1 291805 292689 D PFAM: polysaccharide deacetylase; KEGG: sit:TM1040_0328 polysaccharide deacetylase; polysaccharide deacetylase 291805..292689 Rhizobium leguminosarum bv. trifolii WSM1325 8016672 YP_002979061.1 CDS Rleg_5710 NC_012853.1 292804 293418 D KEGG: yen:YE0806 hypothetical protein; hypothetical protein 292804..293418 Rhizobium leguminosarum bv. trifolii WSM1325 8016673 YP_002979062.1 CDS Rleg_5711 NC_012853.1 293623 294555 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sit:TM1040_0322 LysR family transcriptional regulator; LysR family transcriptional regulator 293623..294555 Rhizobium leguminosarum bv. trifolii WSM1325 8016674 YP_002979063.1 CDS Rleg_5712 NC_012853.1 294682 295554 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_5936 xylose isomerase domain-containing protein; Xylose isomerase domain protein TIM barrel complement(294682..295554) Rhizobium leguminosarum bv. trifolii WSM1325 8016675 YP_002979064.1 CDS Rleg_5713 NC_012853.1 295630 296652 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sus:Acid_2859 alcohol dehydrogenase; Alcohol dehydrogenase zinc-binding domain protein complement(295630..296652) Rhizobium leguminosarum bv. trifolii WSM1325 8016676 YP_002979065.1 CDS Rleg_5714 NC_012853.1 297162 297305 R hypothetical protein complement(297162..297305) Rhizobium leguminosarum bv. trifolii WSM1325 8016677 YP_002979066.1 CDS Rleg_5717 NC_012853.1 298869 300149 D KEGG: pen:PSEEN0847 hypothetical protein; hypothetical protein 298869..300149 Rhizobium leguminosarum bv. trifolii WSM1325 8016680 YP_002979067.1 CDS Rleg_5718 NC_012853.1 300647 300925 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: oan:Oant_4761 histone family protein DNA-binding protein; histone family protein DNA-binding protein 300647..300925 Rhizobium leguminosarum bv. trifolii WSM1325 8016681 YP_002979068.1 CDS Rleg_5720 NC_012853.1 301274 301474 D KEGG: hypothetical protein; hypothetical protein 301274..301474 Rhizobium leguminosarum bv. trifolii WSM1325 8016683 YP_002979069.1 CDS Rleg_5721 NC_012853.1 301718 301915 R hypothetical protein complement(301718..301915) Rhizobium leguminosarum bv. trifolii WSM1325 8016684 YP_002979070.1 CDS Rleg_5722 NC_012853.1 302163 303053 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator complement(302163..303053) Rhizobium leguminosarum bv. trifolii WSM1325 8016685 YP_002979071.1 CDS Rleg_5723 NC_012853.1 303134 303406 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sme:SMc02184 transcription regulator protein; XRE family transcriptional regulator 303134..303406 Rhizobium leguminosarum bv. trifolii WSM1325 8016686 YP_002979072.1 CDS Rleg_5725 NC_012853.1 304238 307456 D PFAM: DEAD/DEAH box helicase; TRCF domain protein; transcription factor CarD; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: mno:Mnod_1599 DEAD/DEAH box helicase; DEAD/DEAH box helicase 304238..307456 Rhizobium leguminosarum bv. trifolii WSM1325 8016688 YP_002979073.1 CDS Rleg_5726 NC_012853.1 308051 308965 R PFAM: alpha/beta hydrolase fold; KEGG: epoxide hydrolase protein; alpha/beta hydrolase fold protein complement(308051..308965) Rhizobium leguminosarum bv. trifolii WSM1325 8016689 YP_002979074.1 CDS Rleg_5727 NC_012853.1 309170 310435 R PFAM: major royal jelly protein; KEGG: mrd:Mrad2831_6245 hypothetical protein; major royal jelly protein complement(309170..310435) Rhizobium leguminosarum bv. trifolii WSM1325 8016690 YP_002979075.1 CDS Rleg_5728 NC_012853.1 310929 313112 R KEGG: mlo:mll8067 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; multi-sensor hybrid histidine kinase complement(310929..313112) Rhizobium leguminosarum bv. trifolii WSM1325 8016691 YP_002979076.1 CDS Rleg_5729 NC_012853.1 313404 314462 R PFAM: HWE histidine kinase; KEGG: atc:AGR_pAT_130 hypothetical protein; signal transduction histidine kinase complement(313404..314462) Rhizobium leguminosarum bv. trifolii WSM1325 8016692 YP_002979077.1 CDS Rleg_5730 NC_012853.1 314459 315901 R KEGG: atc:AGR_pAT_129 hypothetical protein; PFAM: KaiA binding; SMART: AAA ATPase; Non-specific serine/threonine protein kinase complement(314459..315901) Rhizobium leguminosarum bv. trifolii WSM1325 8016693 YP_002979078.1 CDS Rleg_5731 NC_012853.1 315933 316112 D hypothetical protein 315933..316112 Rhizobium leguminosarum bv. trifolii WSM1325 8016694 YP_002979079.1 CDS Rleg_5733 NC_012853.1 316505 317470 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: ccs:CCNA_03285 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 316505..317470 Rhizobium leguminosarum bv. trifolii WSM1325 8016696 YP_002979080.1 CDS Rleg_5734 NC_012853.1 317527 317778 D hypothetical protein 317527..317778 Rhizobium leguminosarum bv. trifolii WSM1325 8016697 YP_002979081.1 CDS Rleg_5735 NC_012853.1 317727 318371 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: met:M446_5631 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(317727..318371) Rhizobium leguminosarum bv. trifolii WSM1325 8016698 YP_002979082.1 CDS Rleg_5736 NC_012853.1 318374 318511 R hypothetical protein complement(318374..318511) Rhizobium leguminosarum bv. trifolii WSM1325 8016699 YP_002979083.1 CDS Rleg_5737 NC_012853.1 318533 318952 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bpt:Bpet3003 hypothetical protein; Cupin 2 conserved barrel domain protein complement(318533..318952) Rhizobium leguminosarum bv. trifolii WSM1325 8016700 YP_002979084.1 CDS Rleg_5739 NC_012853.1 320495 321421 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr7675 quinone oxidoreductase; Alcohol dehydrogenase zinc-binding domain protein complement(320495..321421) Rhizobium leguminosarum bv. trifolii WSM1325 8016702 YP_002979085.1 CDS Rleg_5740 NC_012853.1 321556 322272 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bph:Bphy_3555 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(321556..322272) Rhizobium leguminosarum bv. trifolii WSM1325 8016703 YP_002979086.1 CDS Rleg_5741 NC_012853.1 322915 323430 R hypothetical protein complement(322915..323430) Rhizobium leguminosarum bv. trifolii WSM1325 8016704 YP_002979087.1 CDS Rleg_5742 NC_012853.1 323912 324307 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: azc:AZC_1362 two-component response regulator; response regulator receiver protein complement(323912..324307) Rhizobium leguminosarum bv. trifolii WSM1325 8016705 YP_002979088.1 CDS Rleg_5743 NC_012853.1 324834 325472 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: nodW; two-component nodulation response regulator protein; two component transcriptional regulator, LuxR family 324834..325472 Rhizobium leguminosarum bv. trifolii WSM1325 8016706 YP_002979089.1 CDS Rleg_5744 NC_012853.1 326247 331784 D KEGG: bpy:Bphyt_2428 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; tyrosine protein kinase; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine protein kinase; histidine kinase A domain protein; PAS domain containing protein; multi-sensor signal transduction multi-kinase 326247..331784 Rhizobium leguminosarum bv. trifolii WSM1325 8016707 YP_002979090.1 CDS Rleg_5745 NC_012853.1 332104 332454 R hypothetical protein complement(332104..332454) Rhizobium leguminosarum bv. trifolii WSM1325 8016708 YP_002979091.1 CDS Rleg_5746 NC_012853.1 333069 333326 D KEGG: rec:RHECIAT_PA0000289 hypothetical protein; hypothetical protein 333069..333326 Rhizobium leguminosarum bv. trifolii WSM1325 8016709 YP_002979092.1 CDS Rleg_5747 NC_012853.1 333790 333984 D KEGG: ret:RHE_PC00096 hypothetical protein; hypothetical protein 333790..333984 Rhizobium leguminosarum bv. trifolii WSM1325 8016710 YP_002979093.1 CDS Rleg_5749 NC_012853.1 334417 335190 R PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: atc:AGR_L_3471 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(334417..335190) Rhizobium leguminosarum bv. trifolii WSM1325 8016712 YP_002979094.1 CDS Rleg_5750 NC_012853.1 335316 335897 D PFAM: regulatory protein TetR; KEGG: atc:AGR_L_3469 hypothetical protein; TetR family transcriptional regulator 335316..335897 Rhizobium leguminosarum bv. trifolii WSM1325 8016713 YP_002979095.1 CDS Rleg_5751 NC_012853.1 335866 336081 R hypothetical protein complement(335866..336081) Rhizobium leguminosarum bv. trifolii WSM1325 8016714 YP_002979096.1 CDS Rleg_5752 NC_012853.1 336240 336986 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase protein; short-chain dehydrogenase/reductase SDR complement(336240..336986) Rhizobium leguminosarum bv. trifolii WSM1325 8016715 YP_002979097.1 CDS Rleg_5753 NC_012853.1 337048 337842 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpc:RPC_3421 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(337048..337842) Rhizobium leguminosarum bv. trifolii WSM1325 8016716 YP_002979098.1 CDS Rleg_5754 NC_012853.1 338020 338910 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO3708 LysR family transcriptional regulator; LysR family transcriptional regulator complement(338020..338910) Rhizobium leguminosarum bv. trifolii WSM1325 8016717 YP_002979099.1 CDS Rleg_5755 NC_012853.1 338968 339903 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_2363 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(338968..339903) Rhizobium leguminosarum bv. trifolii WSM1325 8016718 YP_002979100.1 CDS Rleg_5756 NC_012853.1 340010 341038 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mno:Mnod_3453 alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase zinc-binding domain protein 340010..341038 Rhizobium leguminosarum bv. trifolii WSM1325 8016719 YP_002979101.1 CDS Rleg_5757 NC_012853.1 341211 341477 D KEGG: ret:RHE_CH00433 hypothetical protein; hypothetical protein 341211..341477 Rhizobium leguminosarum bv. trifolii WSM1325 8016720 YP_002979102.1 CDS Rleg_5758 NC_012853.1 341654 343072 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; KEGG: mes:Meso_4076 histidine kinase; histidine kinase 341654..343072 Rhizobium leguminosarum bv. trifolii WSM1325 8016721 YP_002979103.1 CDS Rleg_5759 NC_012853.1 343265 344824 D PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: atc:AGR_C_3007 hypothetical protein; phospholipase D/Transphosphatidylase 343265..344824 Rhizobium leguminosarum bv. trifolii WSM1325 8016477 YP_002979104.1 CDS Rleg_5760 NC_012853.1 345246 346736 D KEGG: psp:PSPPH_0943 circadian oscillation regulator KaiC-like protein; PFAM: KaiA binding; Circadian clock protein KaiC central region; SMART: AAA ATPase; circadian clock protein, KaiC 345246..346736 Rhizobium leguminosarum bv. trifolii WSM1325 8016343 YP_002979105.1 CDS Rleg_5761 NC_012853.1 346729 348855 D KEGG: psb:Psyr_2450 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS/PAC sensor hybrid histidine kinase 346729..348855 Rhizobium leguminosarum bv. trifolii WSM1325 8016559 YP_002979106.1 CDS Rleg_5762 NC_012853.1 349412 350137 D KEGG: rec:RHECIAT_PC0000054 hypothetical protein; transcriptional regulator, Crp/Fnr family 349412..350137 Rhizobium leguminosarum bv. trifolii WSM1325 8016560 YP_002979107.1 CDS Rleg_5763 NC_012853.1 350168 350407 R KEGG: rec:RHECIAT_PC0000053 hypothetical protein; hypothetical protein complement(350168..350407) Rhizobium leguminosarum bv. trifolii WSM1325 8016561 YP_002979108.1 CDS Rleg_5764 NC_012853.1 350622 351335 D KEGG: rec:RHECIAT_PC0000054 hypothetical protein; transcriptional regulator, Crp/Fnr family 350622..351335 Rhizobium leguminosarum bv. trifolii WSM1325 8016562 YP_002979109.1 CDS Rleg_5765 NC_012853.1 351332 351553 D hypothetical protein 351332..351553 Rhizobium leguminosarum bv. trifolii WSM1325 8016563 YP_002979110.1 CDS Rleg_5766 NC_012853.1 351571 352479 R PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH01085 esterase protein; alpha/beta hydrolase fold protein complement(351571..352479) Rhizobium leguminosarum bv. trifolii WSM1325 8016564 YP_002979111.1 CDS Rleg_5768 NC_012853.1 353413 353721 R KEGG: smd:Smed_5308 hypothetical protein; hypothetical protein complement(353413..353721) Rhizobium leguminosarum bv. trifolii WSM1325 8016566 YP_002979112.1 CDS Rleg_5770 NC_012853.1 355158 355601 R SMART: response regulator receiver; KEGG: ret:RHE_PF00120 two-component response regulator protein; response regulator receiver protein complement(355158..355601) Rhizobium leguminosarum bv. trifolii WSM1325 8016568 YP_002979113.1 CDS Rleg_5772 NC_012853.1 356333 356596 R KEGG: ret:RHE_PB00043 hypothetical protein; hypothetical protein complement(356333..356596) Rhizobium leguminosarum bv. trifolii WSM1325 8016570 YP_002979114.1 CDS Rleg_5773 NC_012853.1 356583 356981 R KEGG: rru:Rru_A2294 alpha amylase, catalytic region; alpha amylase, catalytic region complement(356583..356981) Rhizobium leguminosarum bv. trifolii WSM1325 8016571 YP_002979115.1 CDS Rleg_5774 NC_012853.1 357073 357366 R hypothetical protein complement(357073..357366) Rhizobium leguminosarum bv. trifolii WSM1325 8016572 YP_002979116.1 CDS Rleg_5775 NC_012853.1 357514 358500 R KEGG: rec:RHECIAT_PC0000148 hypothetical protein; hypothetical protein complement(357514..358500) Rhizobium leguminosarum bv. trifolii WSM1325 8016573 YP_002979117.1 CDS Rleg_5776 NC_012853.1 358819 359826 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bra:BRADO4879 short-chain dehydrogenase/reductase (modular); short-chain dehydrogenase/reductase SDR 358819..359826 Rhizobium leguminosarum bv. trifolii WSM1325 8016574 YP_002979118.1 CDS Rleg_5777 NC_012853.1 360097 360291 R hypothetical protein complement(360097..360291) Rhizobium leguminosarum bv. trifolii WSM1325 8016575 YP_002979119.1 CDS Rleg_5778 NC_012853.1 360637 360852 D KEGG: rec:RHECIAT_PC0000454 hypothetical protein; hypothetical protein 360637..360852 Rhizobium leguminosarum bv. trifolii WSM1325 8016576 YP_002979120.1 CDS Rleg_5779 NC_012853.1 360862 361041 D KEGG: smd:Smed_3780 hypothetical protein; hypothetical protein 360862..361041 Rhizobium leguminosarum bv. trifolii WSM1325 8016577 YP_002979121.1 CDS Rleg_5780 NC_012853.1 361053 361241 D KEGG: smd:Smed_3779 hypothetical protein; hypothetical protein 361053..361241 Rhizobium leguminosarum bv. trifolii WSM1325 8016578 YP_002979122.1 CDS Rleg_5781 NC_012853.1 361659 361895 R KEGG: atc:AGR_pAT_694 hypothetical protein; hypothetical protein complement(361659..361895) Rhizobium leguminosarum bv. trifolii WSM1325 8016579 YP_002979123.1 CDS Rleg_5782 NC_012853.1 362127 362261 R hypothetical protein complement(362127..362261) Rhizobium leguminosarum bv. trifolii WSM1325 8016580 YP_002979124.1 CDS Rleg_5783 NC_012853.1 362482 362730 D KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein 362482..362730 Rhizobium leguminosarum bv. trifolii WSM1325 8016581 YP_002979125.1 CDS Rleg_5784 NC_012853.1 363111 363395 D KEGG: rec:RHECIAT_CH0002664 hypothetical protein; hypothetical protein 363111..363395 Rhizobium leguminosarum bv. trifolii WSM1325 8016582 YP_002979126.1 CDS Rleg_5786 NC_012853.1 364813 365268 D KEGG: sme:SM_b20236 hypothetical protein; hypothetical protein 364813..365268 Rhizobium leguminosarum bv. trifolii WSM1325 8016584 YP_002979127.1 CDS Rleg_5787 NC_012853.1 365421 365624 R KEGG: rec:RHECIAT_PC0000150 hypothetical protein; hypothetical protein complement(365421..365624) Rhizobium leguminosarum bv. trifolii WSM1325 8016585 YP_002979128.1 CDS Rleg_5788 NC_012853.1 366007 367461 D PFAM: UbiA prenyltransferase; KEGG: ret:RHE_CH03427 integral membrane prenyltransferase protein; hypothetical protein 366007..367461 Rhizobium leguminosarum bv. trifolii WSM1325 8016586 YP_002979129.1 CDS Rleg_5789 NC_012853.1 367472 367903 D KEGG: ret:RHE_CH03426 hypothetical protein; hypothetical protein 367472..367903 Rhizobium leguminosarum bv. trifolii WSM1325 8016587 YP_002979130.1 CDS Rleg_5790 NC_012853.1 367911 369233 D PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH03425 oxidoreductase protein; FAD linked oxidase domain protein 367911..369233 Rhizobium leguminosarum bv. trifolii WSM1325 8016588 YP_002979131.1 CDS Rleg_5791 NC_012853.1 369230 369979 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH03424 short chain dehydrogenase; short chain dehydrogenase 369230..369979 Rhizobium leguminosarum bv. trifolii WSM1325 8016589 YP_002979132.1 CDS Rleg_5792 NC_012853.1 370083 371642 D KEGG: rec:RHECIAT_PC0000155 hypothetical protein; hypothetical protein 370083..371642 Rhizobium leguminosarum bv. trifolii WSM1325 8016590 YP_002979133.1 CDS Rleg_5793 NC_012853.1 371639 373261 D KEGG: ret:RHE_CH03422 hypothetical protein; hypothetical protein 371639..373261 Rhizobium leguminosarum bv. trifolii WSM1325 8016591 YP_002979134.1 CDS Rleg_5794 NC_012853.1 373305 373442 D hypothetical protein 373305..373442 Rhizobium leguminosarum bv. trifolii WSM1325 8016592 YP_002979135.1 CDS Rleg_5798 NC_012853.1 374940 375557 D KEGG: rec:RHECIAT_CH0001677 NADH-ubiquinone oxidoreductase protein, chain C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase, subunit C 374940..375557 Rhizobium leguminosarum bv. trifolii WSM1325 8016596 YP_002979136.1 CDS Rleg_5799 NC_012853.1 375584 376774 D KEGG: nouD; NADH ubiquinone oxidoreductase chain D ; K00333 NADH dehydrogenase I subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I, D subunit 375584..376774 Rhizobium leguminosarum bv. trifolii WSM1325 8016597 YP_002979137.1 CDS Rleg_5801 NC_012853.1 376995 377840 R TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; KEGG: cps:CPS_1870 cyanophycinase; cyanophycinase complement(376995..377840) Rhizobium leguminosarum bv. trifolii WSM1325 8016599 YP_002979138.1 CDS Rleg_5802 NC_012853.1 377833 378705 R PFAM: peptidase T2 asparaginase 2; KEGG: dvu:DVU2242 asparaginase family protein; Asparaginase complement(377833..378705) Rhizobium leguminosarum bv. trifolii WSM1325 8016600 YP_002979139.1 CDS Rleg_5803 NC_012853.1 378705 381437 R TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; RimK domain protein ATP-grasp; KEGG: cps:CPS_1871 cyanophycin synthetase; SNP /replace=T; cyanophycin synthetase complement(378705..381437) Rhizobium leguminosarum bv. trifolii WSM1325 8016601 YP_002979140.1 CDS Rleg_5804 NC_012853.1 381791 382321 D hypothetical protein 381791..382321 Rhizobium leguminosarum bv. trifolii WSM1325 8016602 YP_002979141.1 CDS Rleg_5805 NC_012853.1 382737 383192 D PFAM: protein of unknown function DUF892; KEGG: ret:RHE_PF00058 hypothetical protein; hypothetical protein 382737..383192 Rhizobium leguminosarum bv. trifolii WSM1325 8016603 YP_002979142.1 CDS Rleg_5806 NC_012853.1 383278 383877 R KEGG: bpd:BURPS668_A0145 hypothetical protein; hypothetical protein complement(383278..383877) Rhizobium leguminosarum bv. trifolii WSM1325 8016604 YP_002979143.1 CDS Rleg_5807 NC_012853.1 384161 384988 D PFAM: manganese containing catalase; KEGG: smd:Smed_6390 catalase; Catalase 384161..384988 Rhizobium leguminosarum bv. trifolii WSM1325 8016605 YP_002979144.1 CDS Rleg_5809 NC_012853.1 385551 385877 R KEGG: oan:Oant_4636 heat shock protein HSP20; hypothetical protein complement(385551..385877) Rhizobium leguminosarum bv. trifolii WSM1325 8016607 YP_002979145.1 CDS Rleg_5810 NC_012853.1 386066 386623 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(386066..386623) Rhizobium leguminosarum bv. trifolii WSM1325 8016608 YP_002979146.1 CDS Rleg_5811 NC_012853.1 387052 387315 R hypothetical protein complement(387052..387315) Rhizobium leguminosarum bv. trifolii WSM1325 8016609 YP_002979147.1 CDS Rleg_5815 NC_012853.1 390027 390188 R KEGG: mrd:Mrad2831_4921 hypothetical protein; hypothetical protein complement(390027..390188) Rhizobium leguminosarum bv. trifolii WSM1325 8016613 YP_002979148.1 CDS Rleg_5816 NC_012853.1 390181 390663 R KEGG: rec:RHECIAT_PB0000025 hypothetical conserved membrane protein; conserved hypothetical conserved membrane protein complement(390181..390663) Rhizobium leguminosarum bv. trifolii WSM1325 8016614 YP_002979149.1 CDS Rleg_5817 NC_012853.1 390660 390920 R PFAM: protein of unknown function DUF982; KEGG: atc:AGR_C_3319 hypothetical protein; hypothetical protein complement(390660..390920) Rhizobium leguminosarum bv. trifolii WSM1325 8016615 YP_002979150.1 CDS Rleg_5818 NC_012853.1 391241 392125 D PFAM: beta-lactamase domain protein; KEGG: mes:Meso_3529 beta-lactamase-like; beta-lactamase domain protein 391241..392125 Rhizobium leguminosarum bv. trifolii WSM1325 8016616 YP_002979151.1 CDS Rleg_5819 NC_012853.1 392556 392939 D TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bms:BR1903 succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein 392556..392939 Rhizobium leguminosarum bv. trifolii WSM1325 8016617 YP_002979152.1 CDS Rleg_5820 NC_012853.1 393068 393595 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ret:RHE_PF00052 RNA polymerase sigma-E factor; RNA polymerase, sigma-24 subunit, ECF subfamily 393068..393595 Rhizobium leguminosarum bv. trifolii WSM1325 8016618 YP_002979153.1 CDS Rleg_5821 NC_012853.1 393766 394119 D KEGG: mes:Meso_0331 hypothetical protein; hypothetical protein 393766..394119 Rhizobium leguminosarum bv. trifolii WSM1325 8016619 YP_002979154.1 CDS Rleg_5822 NC_012853.1 394139 395314 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bxe:Bxe_B2482 zinc-containing dehydrogenase; Alcohol dehydrogenase GroES domain protein 394139..395314 Rhizobium leguminosarum bv. trifolii WSM1325 8016620 YP_002979155.1 CDS Rleg_5823 NC_012853.1 395540 396502 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ret:RHE_PF00060 hypothetical protein; Alpha/beta hydrolase fold-3 domain protein 395540..396502 Rhizobium leguminosarum bv. trifolii WSM1325 8016621 YP_002979156.1 CDS Rleg_5824 NC_012853.1 396624 399026 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: mlo:mll9633 formate dehydrogenase; oxidoreductase alpha (molybdopterin) subunit 396624..399026 Rhizobium leguminosarum bv. trifolii WSM1325 8016622 YP_002979157.1 CDS Rleg_5825 NC_012853.1 399047 399649 D KEGG: mlo:mll9632 cytochrome c oxidase subunit III; hypothetical protein 399047..399649 Rhizobium leguminosarum bv. trifolii WSM1325 8016623 YP_002979158.1 CDS Rleg_5826 NC_012853.1 399646 400638 D TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: ret:RHE_PB00065 cytochrome c oxidase subunit II protein; cytochrome c oxidase, subunit II 399646..400638 Rhizobium leguminosarum bv. trifolii WSM1325 8016624 YP_002979159.1 CDS Rleg_5827 NC_012853.1 400635 402542 D KEGG: mlo:mll9630 cytochrome c oxidase subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase, subunit I 400635..402542 Rhizobium leguminosarum bv. trifolii WSM1325 8016625 YP_002979160.1 CDS Rleg_5828 NC_012853.1 402539 403141 D PFAM: cytochrome c oxidase subunit III; KEGG: ret:RHE_PB00063 cytochrome c oxidase subunit III protein; cytochrome c oxidase subunit III 402539..403141 Rhizobium leguminosarum bv. trifolii WSM1325 8016626 YP_002979161.1 CDS Rleg_5829 NC_012853.1 403475 403885 D KEGG: rec:RHECIAT_PC0000287 cytochrome c protein, class I; cytochrome c protein, class I 403475..403885 Rhizobium leguminosarum bv. trifolii WSM1325 8016627 YP_002979162.1 CDS Rleg_5830 NC_012853.1 403886 404806 R KEGG: rec:RHECIAT_PC0000288 diheme cytochrome c-type signal-peptide protein; diheme cytochrome c-type signal-peptide protein complement(403886..404806) Rhizobium leguminosarum bv. trifolii WSM1325 8016628 YP_002979163.1 CDS Rleg_5831 NC_012853.1 404913 405233 R PFAM: protein of unknown function DUF1452; KEGG: bcn:Bcen_1288 hypothetical protein; hypothetical protein complement(404913..405233) Rhizobium leguminosarum bv. trifolii WSM1325 8016629 YP_002979164.1 CDS Rleg_5832 NC_012853.1 405340 405834 R PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0002174 hydrolase protein; NUDIX hydrolase complement(405340..405834) Rhizobium leguminosarum bv. trifolii WSM1325 8016630 YP_002979165.1 CDS Rleg_5833 NC_012853.1 405987 406694 D KEGG: nwi:Nwi_2311 hypothetical protein; hypothetical protein 405987..406694 Rhizobium leguminosarum bv. trifolii WSM1325 8016631 YP_002979166.1 CDS Rleg_5835 NC_012853.1 407051 407986 R PFAM: NmrA family protein; KEGG: rpc:RPC_1503 NmrA-like; NmrA family protein complement(407051..407986) Rhizobium leguminosarum bv. trifolii WSM1325 8016633 YP_002979167.1 CDS Rleg_5836 NC_012853.1 408061 408885 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rpc:RPC_1502 AraC family transcriptional regulator; AraC family transcriptional regulator 408061..408885 Rhizobium leguminosarum bv. trifolii WSM1325 8016634 YP_002979168.1 CDS Rleg_5837 NC_012853.1 409248 410015 R KEGG: rec:RHECIAT_CH0003417 hypothetical protein; transcriptional regulator, Crp/Fnr family complement(409248..410015) Rhizobium leguminosarum bv. trifolii WSM1325 8016635 YP_002979169.1 CDS Rleg_5838 NC_012853.1 410121 410369 R KEGG: atc:AGR_pAT_694 hypothetical protein; hypothetical protein complement(410121..410369) Rhizobium leguminosarum bv. trifolii WSM1325 8016636 YP_002979170.1 CDS Rleg_5839 NC_012853.1 410945 411193 D KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein 410945..411193 Rhizobium leguminosarum bv. trifolii WSM1325 8016637 YP_002979171.1 CDS Rleg_5840 NC_012853.1 411190 411951 D PFAM: protein of unknown function DUF892; KEGG: ret:RHE_PF00051 hypothetical protein; hypothetical protein 411190..411951 Rhizobium leguminosarum bv. trifolii WSM1325 8016638 YP_002979172.1 CDS Rleg_5841 NC_012853.1 412029 412943 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ret:RHE_PF00137 thioredoxin reductase (NADPH) protein; Thioredoxin-disulfide reductase complement(412029..412943) Rhizobium leguminosarum bv. trifolii WSM1325 8016639 YP_002979173.1 CDS Rleg_5842 NC_012853.1 413911 414069 D hypothetical protein 413911..414069 Rhizobium leguminosarum bv. trifolii WSM1325 8016393 YP_002979174.1 CDS Rleg_5843 NC_012853.1 414101 414865 D KEGG: mch:Mchl_3374 transcriptional regulator, Crp/Fnr family; transcriptional regulator, Crp/Fnr family 414101..414865 Rhizobium leguminosarum bv. trifolii WSM1325 8016478 YP_002979175.1 CDS Rleg_5844 NC_012853.1 414866 415171 R KEGG: mrd:Mrad2831_2158 hypothetical protein; hypothetical protein complement(414866..415171) Rhizobium leguminosarum bv. trifolii WSM1325 8016479 YP_002979176.1 CDS Rleg_5846 NC_012853.1 415687 415977 R KEGG: ret:RHE_PF00328 hypothetical protein; hypothetical protein complement(415687..415977) Rhizobium leguminosarum bv. trifolii WSM1325 8016481 YP_002979177.1 CDS Rleg_5847 NC_012853.1 416072 416344 R PFAM: Usg family protein; KEGG: ret:RHE_CH01237 phosphoribosylanthranilate isomerase subunit; Usg family protein complement(416072..416344) Rhizobium leguminosarum bv. trifolii WSM1325 8016482 YP_002979178.1 CDS Rleg_5848 NC_012853.1 416620 416934 D PFAM: chaperonin Cpn10; KEGG: ret:RHE_PF00329 10 kDa chaperonin, heat shock protein; chaperonin Cpn10 416620..416934 Rhizobium leguminosarum bv. trifolii WSM1325 8016483 YP_002979179.1 CDS groEL NC_012853.1 416980 418608 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 416980..418608 Rhizobium leguminosarum bv. trifolii WSM1325 8016484 YP_002979180.1 CDS Rleg_5850 NC_012853.1 418709 419128 D KEGG: ret:RHE_CH01240 hypothetical protein; hypothetical protein 418709..419128 Rhizobium leguminosarum bv. trifolii WSM1325 8016485 YP_002979181.1 CDS Rleg_5851 NC_012853.1 419216 420310 D PFAM: glycosyl transferase group 1; KEGG: rec:RHECIAT_CH0001328 glycosyltransferase protein; glycosyl transferase group 1 419216..420310 Rhizobium leguminosarum bv. trifolii WSM1325 8016486 YP_002979182.1 CDS Rleg_5852 NC_012853.1 420320 422530 D PFAM: Amylo-alpha-16-glucosidase; KEGG: ret:RHE_CH01242 hypothetical protein; Amylo-alpha-16-glucosidase 420320..422530 Rhizobium leguminosarum bv. trifolii WSM1325 8016487 YP_002979183.1 CDS Rleg_5854 NC_012853.1 422887 423522 R hypothetical protein complement(422887..423522) Rhizobium leguminosarum bv. trifolii WSM1325 8016489 YP_002979184.1 CDS Rleg_5856 NC_012853.1 424104 424517 R KEGG: bpy:Bphyt_5869 protein of unknown function DUF1486; hypothetical protein complement(424104..424517) Rhizobium leguminosarum bv. trifolii WSM1325 8016491 YP_002979185.1 CDS Rleg_5857 NC_012853.1 424587 425186 R PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: msl:Msil_3365 NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent complement(424587..425186) Rhizobium leguminosarum bv. trifolii WSM1325 8016492 YP_002979186.1 CDS Rleg_5858 NC_012853.1 425260 425994 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr5278 glucose dehydrogenase; short-chain dehydrogenase/reductase SDR complement(425260..425994) Rhizobium leguminosarum bv. trifolii WSM1325 8016493 YP_002979187.1 CDS Rleg_5859 NC_012853.1 426202 427149 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr3992 transcriptional regulatory protein; LysR family transcriptional regulator 426202..427149 Rhizobium leguminosarum bv. trifolii WSM1325 8016494 YP_002979188.1 CDS Rleg_5863 NC_012853.1 428708 428935 D KEGG: sme:SM_b20413 hypothetical protein; hypothetical protein 428708..428935 Rhizobium leguminosarum bv. trifolii WSM1325 8016498 YP_002979189.1 CDS Rleg_5864 NC_012853.1 428932 429375 D TIGRFAM: PIN domain protein family protein; PFAM: PilT protein domain protein; KEGG: bvi:Bcep1808_6071 PilT domain-containing protein; PIN domain protein family protein 428932..429375 Rhizobium leguminosarum bv. trifolii WSM1325 8016499 YP_002979190.1 CDS Rleg_5865 NC_012853.1 429427 429549 D hypothetical protein 429427..429549 Rhizobium leguminosarum bv. trifolii WSM1325 8016500 YP_002979191.1 CDS Rleg_5867 NC_012853.1 430450 430653 R hypothetical protein complement(430450..430653) Rhizobium leguminosarum bv. trifolii WSM1325 8016502 YP_002979192.1 CDS Rleg_5868 NC_012853.1 430955 432856 D PFAM: K potassium transporter; KEGG: mlo:mll1417 potassium uptake protein Kup; K potassium transporter 430955..432856 Rhizobium leguminosarum bv. trifolii WSM1325 8016503 YP_002979193.1 CDS Rleg_5869 NC_012853.1 432906 434162 D PFAM: sodium/hydrogen exchanger; KEGG: rpc:RPC_1941 sodium/hydrogen exchanger; sodium/hydrogen exchanger 432906..434162 Rhizobium leguminosarum bv. trifolii WSM1325 8016504 YP_002979194.1 CDS Rleg_5870 NC_012853.1 434193 434303 D hypothetical protein 434193..434303 Rhizobium leguminosarum bv. trifolii WSM1325 8016505 YP_002979195.1 CDS Rleg_5871 NC_012853.1 434396 434815 D PFAM: glycosyl transferase family 28; KEGG: nwi:Nwi_2852 glycosyl transferase family protein; glycosyl transferase family 28 434396..434815 Rhizobium leguminosarum bv. trifolii WSM1325 8016506 YP_002979196.1 CDS Rleg_5873 NC_012853.1 435222 435554 R PFAM: protein of unknown function DUF326; KEGG: ret:RHE_CH02512 hypothetical protein; hypothetical protein complement(435222..435554) Rhizobium leguminosarum bv. trifolii WSM1325 8016508 YP_002979197.1 CDS Rleg_5874 NC_012853.1 435566 435997 R PFAM: protein of unknown function DUF305; KEGG: ret:RHE_CH02513 hypothetical protein; hypothetical protein complement(435566..435997) Rhizobium leguminosarum bv. trifolii WSM1325 8016509 YP_002979198.1 CDS Rleg_5877 NC_012853.1 437124 437387 D hypothetical protein 437124..437387 Rhizobium leguminosarum bv. trifolii WSM1325 8016512 YP_002979199.1 CDS Rleg_5879 NC_012853.1 437621 438388 R KEGG: rec:RHECIAT_CH0003417 hypothetical protein; transcriptional regulator, Crp/Fnr family complement(437621..438388) Rhizobium leguminosarum bv. trifolii WSM1325 8016514 YP_002979200.1 CDS Rleg_5880 NC_012853.1 438503 438739 R KEGG: atc:AGR_pAT_694 hypothetical protein; hypothetical protein complement(438503..438739) Rhizobium leguminosarum bv. trifolii WSM1325 8016515 YP_002979201.1 CDS Rleg_5881 NC_012853.1 439291 439539 D KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein 439291..439539 Rhizobium leguminosarum bv. trifolii WSM1325 8016516 YP_002979202.1 CDS Rleg_5882 NC_012853.1 439865 440377 R KEGG: rru:Rru_A0538 hypothetical protein; hypothetical protein complement(439865..440377) Rhizobium leguminosarum bv. trifolii WSM1325 8016517 YP_002979203.1 CDS Rleg_5883 NC_012853.1 440387 441580 R PFAM: protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: rru:Rru_A0537 hypothetical protein; hypothetical protein complement(440387..441580) Rhizobium leguminosarum bv. trifolii WSM1325 8016518 YP_002979204.1 CDS Rleg_5884 NC_012853.1 442026 442187 R hypothetical protein complement(442026..442187) Rhizobium leguminosarum bv. trifolii WSM1325 8016519 YP_002979205.1 CDS Rleg_5885 NC_012853.1 442414 443073 R KEGG: rec:RHECIAT_CH0003417 hypothetical protein; transcriptional regulator, Crp/Fnr family complement(442414..443073) Rhizobium leguminosarum bv. trifolii WSM1325 8016520 YP_002979206.1 CDS Rleg_5886 NC_012853.1 443245 443475 R KEGG: atc:AGR_pAT_694 hypothetical protein; hypothetical protein complement(443245..443475) Rhizobium leguminosarum bv. trifolii WSM1325 8016521 YP_002979207.1 CDS Rleg_5887 NC_012853.1 444047 444295 D KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein 444047..444295 Rhizobium leguminosarum bv. trifolii WSM1325 8016522 YP_002979208.1 CDS Rleg_5889 NC_012853.1 444956 445339 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bja:blr0513 succinate dehydrogenase hydrophobic membrane anchor protein subunit; succinate dehydrogenase, hydrophobic membrane anchor protein complement(444956..445339) Rhizobium leguminosarum bv. trifolii WSM1325 8016524 YP_002979209.1 CDS Rleg_5891 NC_012853.1 445919 446359 D PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: rpsD; ribosomal protein S4 ; K02986 small subunit ribosomal protein S4; RNA-binding S4 domain protein 445919..446359 Rhizobium leguminosarum bv. trifolii WSM1325 8016526 YP_002979210.1 CDS Rleg_5893 NC_012853.1 447171 448568 D KEGG: ret:RHE_PF00065 two-component sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase 447171..448568 Rhizobium leguminosarum bv. trifolii WSM1325 8016528 YP_002979211.1 CDS Rleg_5894 NC_012853.1 448645 448881 R PFAM: protein of unknown function DUF378; KEGG: rsq:Rsph17025_0607 hypothetical protein; hypothetical protein complement(448645..448881) Rhizobium leguminosarum bv. trifolii WSM1325 8016529 YP_002979212.1 CDS Rleg_5895 NC_012853.1 448951 449184 R KEGG: rce:RC1_3376 hypothetical protein; SNP /replace=G; hypothetical protein complement(448951..449184) Rhizobium leguminosarum bv. trifolii WSM1325 8016530 YP_002979213.1 CDS Rleg_5896 NC_012853.1 449253 449453 R KEGG: xcv:XCV2756 hypothetical protein; hypothetical protein complement(449253..449453) Rhizobium leguminosarum bv. trifolii WSM1325 8016531 YP_002979214.1 CDS Rleg_5897 NC_012853.1 449920 450906 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SM_b20076 short chain dehydrogenase; short chain dehydrogenase 449920..450906 Rhizobium leguminosarum bv. trifolii WSM1325 8016532 YP_002979215.1 CDS Rleg_5898 NC_012853.1 450967 451686 D KEGG: mch:Mchl_4521 hypothetical protein; hypothetical protein 450967..451686 Rhizobium leguminosarum bv. trifolii WSM1325 8016533 YP_002979216.1 CDS Rleg_5899 NC_012853.1 451683 453074 R KEGG: pmy:Pmen_3125 hypothetical protein; hypothetical protein complement(451683..453074) Rhizobium leguminosarum bv. trifolii WSM1325 8016534 YP_002979217.1 CDS Rleg_5900 NC_012853.1 453071 454450 R KEGG: ret:RHE_PF00053 hypothetical protein; hypothetical protein complement(453071..454450) Rhizobium leguminosarum bv. trifolii WSM1325 8016535 YP_002979218.1 CDS Rleg_5901 NC_012853.1 454488 455309 D PFAM: alpha/beta hydrolase fold; KEGG: rpt:Rpal_3816 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 454488..455309 Rhizobium leguminosarum bv. trifolii WSM1325 8016536 YP_002979219.1 CDS Rleg_5902 NC_012853.1 455577 456035 D KEGG: ret:RHE_PF00120 two-component response regulator protein; response regulator receiver and SARP domain protein 455577..456035 Rhizobium leguminosarum bv. trifolii WSM1325 8016537 YP_002979220.1 CDS Rleg_5903 NC_012853.1 456002 457003 R PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: bra:BRADO3944 oxidoreductase NAD(P)-binding subunit; short-chain dehydrogenase/reductase SDR complement(456002..457003) Rhizobium leguminosarum bv. trifolii WSM1325 8016538 YP_002979221.1 CDS Rleg_5904 NC_012853.1 457019 457816 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PB00044 short chain oxidoreductase protein; SNP /replace=A; SNP /replace=A; short-chain dehydrogenase/reductase SDR complement(457019..457816) Rhizobium leguminosarum bv. trifolii WSM1325 8016539 YP_002979222.1 CDS Rleg_5905 NC_012853.1 458056 458370 D KEGG: rec:RHECIAT_PA0000166 hypothetical protein; hypothetical protein 458056..458370 Rhizobium leguminosarum bv. trifolii WSM1325 8016540 YP_002979223.1 CDS Rleg_5906 NC_012853.1 458384 458716 D KEGG: ret:RHE_PE00211 hypothetical protein; hypothetical protein 458384..458716 Rhizobium leguminosarum bv. trifolii WSM1325 8016541 YP_002979224.1 CDS Rleg_5908 NC_012853.1 459798 460160 D KEGG: ret:RHE_PB00039 hypothetical protein; hypothetical protein 459798..460160 Rhizobium leguminosarum bv. trifolii WSM1325 8016543 YP_002979225.1 CDS Rleg_5909 NC_012853.1 460180 460428 D hypothetical protein 460180..460428 Rhizobium leguminosarum bv. trifolii WSM1325 8016544 YP_002979226.1 CDS Rleg_5910 NC_012853.1 460483 461145 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: sme:SM_b21448 DNA polymerase related protein; phage SPO1 DNA polymerase-related protein complement(460483..461145) Rhizobium leguminosarum bv. trifolii WSM1325 8016545 YP_002979227.1 CDS Rleg_5911 NC_012853.1 461488 461706 R KEGG: mpo:Mpop_0752 hypothetical protein; hypothetical protein complement(461488..461706) Rhizobium leguminosarum bv. trifolii WSM1325 8016546 YP_002979228.1 CDS Rleg_5912 NC_012853.1 461878 463851 R KEGG: sme:SM_b20088 hypothetical protein; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: Erythromycin esterase; protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(461878..463851) Rhizobium leguminosarum bv. trifolii WSM1325 8016547 YP_002979229.1 CDS Rleg_5913 NC_012853.1 463854 464099 R KEGG: smd:Smed_2023 hypothetical protein; hypothetical protein complement(463854..464099) Rhizobium leguminosarum bv. trifolii WSM1325 8016548 YP_002979230.1 CDS Rleg_5914 NC_012853.1 464112 464327 R KEGG: met:M446_5492 hypothetical protein; hypothetical protein complement(464112..464327) Rhizobium leguminosarum bv. trifolii WSM1325 8016549 YP_002979231.1 CDS Rleg_5915 NC_012853.1 464678 464890 D KEGG: rec:RHECIAT_PC0000454 hypothetical protein; hypothetical protein 464678..464890 Rhizobium leguminosarum bv. trifolii WSM1325 8016550 YP_002979232.1 CDS Rleg_5916 NC_012853.1 465574 468168 R PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: mlo:mll4526 transcriptional regulatory; transcriptional regulator, LuxR family complement(465574..468168) Rhizobium leguminosarum bv. trifolii WSM1325 8016551 YP_002979233.1 CDS Rleg_5917 NC_012853.1 468329 468610 D KEGG: gur:Gura_3576 hypothetical protein; hypothetical protein 468329..468610 Rhizobium leguminosarum bv. trifolii WSM1325 8016552 YP_002979234.1 CDS Rleg_5918 NC_012853.1 468829 469161 R hypothetical protein complement(468829..469161) Rhizobium leguminosarum bv. trifolii WSM1325 8016553 YP_002979235.1 CDS Rleg_5919 NC_012853.1 469584 470474 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator complement(469584..470474) Rhizobium leguminosarum bv. trifolii WSM1325 8016554 YP_002979236.1 CDS Rleg_5920 NC_012853.1 470580 470798 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: oan:Oant_1848 transcriptional regulator, XRE family; XRE family transcriptional regulator 470580..470798 Rhizobium leguminosarum bv. trifolii WSM1325 8016555 YP_002979237.1 CDS Rleg_5922 NC_012853.1 471454 471798 R KEGG: pde:Pden_3157 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein complement(471454..471798) Rhizobium leguminosarum bv. trifolii WSM1325 8016557 YP_002979238.1 CDS Rleg_5923 NC_012853.1 471958 472716 D hypothetical protein 471958..472716 Rhizobium leguminosarum bv. trifolii WSM1325 8016558 YP_002979239.1 CDS Rleg_5924 NC_012853.1 472728 472889 D hypothetical protein 472728..472889 Rhizobium leguminosarum bv. trifolii WSM1325 8016344 YP_002979240.1 CDS Rleg_5925 NC_012853.1 472870 473145 R KEGG: rec:RHECIAT_CH0000474 hypothetical protein; hypothetical protein complement(472870..473145) Rhizobium leguminosarum bv. trifolii WSM1325 8016345 YP_002979241.1 CDS Rleg_5926 NC_012853.1 473271 473651 R KEGG: hypothetical protein; hypothetical protein complement(473271..473651) Rhizobium leguminosarum bv. trifolii WSM1325 8016346 YP_002979242.1 CDS Rleg_5927 NC_012853.1 473683 473907 R KEGG: ret:RHE_CH00434 hypothetical protein; hypothetical protein complement(473683..473907) Rhizobium leguminosarum bv. trifolii WSM1325 8016347 YP_002979243.1 CDS Rleg_5928 NC_012853.1 474029 474238 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rec:RHECIAT_CH0000476 probable cold shock protein; cold-shock DNA-binding domain protein complement(474029..474238) Rhizobium leguminosarum bv. trifolii WSM1325 8016348 YP_002979244.1 CDS Rleg_5929 NC_012853.1 474668 475054 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0003075 probable two-component response regulator protein; response regulator receiver protein 474668..475054 Rhizobium leguminosarum bv. trifolii WSM1325 8016349 YP_002979245.1 CDS Rleg_5930 NC_012853.1 475511 475900 R hypothetical protein complement(475511..475900) Rhizobium leguminosarum bv. trifolii WSM1325 8016350 YP_002979246.1 CDS Rleg_5931 NC_012853.1 475920 476525 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: psb:Psyr_2743 lysine exporter protein LysE/YggA; Lysine exporter protein (LYSE/YGGA) 475920..476525 Rhizobium leguminosarum bv. trifolii WSM1325 8016351 YP_002979247.1 CDS Rleg_5932 NC_012853.1 477111 477362 D hypothetical protein 477111..477362 Rhizobium leguminosarum bv. trifolii WSM1325 8016352 YP_002979248.1 CDS Rleg_5934 NC_012853.1 478192 479334 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: swi:Swit_3974 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 478192..479334 Rhizobium leguminosarum bv. trifolii WSM1325 8016354 YP_002979249.1 CDS Rleg_5936 NC_012853.1 479735 480253 R PFAM: DoxX family protein; KEGG: bpy:Bphyt_5146 DoxX family protein; DoxX family protein complement(479735..480253) Rhizobium leguminosarum bv. trifolii WSM1325 8016356 YP_002979250.1 CDS Rleg_5937 NC_012853.1 480253 481053 R KEGG: rpe:RPE_1949 hypothetical protein; hypothetical protein complement(480253..481053) Rhizobium leguminosarum bv. trifolii WSM1325 8016357 YP_002979251.1 CDS Rleg_5938 NC_012853.1 481040 481966 R PFAM: protein of unknown function DUF692; KEGG: rpe:RPE_1948 hypothetical protein; hypothetical protein complement(481040..481966) Rhizobium leguminosarum bv. trifolii WSM1325 8016358 YP_002979252.1 CDS Rleg_5939 NC_012853.1 482012 482317 R KEGG: bra:BRADO7096 hypothetical protein; hypothetical protein complement(482012..482317) Rhizobium leguminosarum bv. trifolii WSM1325 8016359 YP_002979253.1 CDS Rleg_5940 NC_012853.1 482718 484619 D PFAM: K potassium transporter; KEGG: mlo:mll1417 potassium uptake protein Kup; K potassium transporter 482718..484619 Rhizobium leguminosarum bv. trifolii WSM1325 8016360 YP_002979254.1 CDS Rleg_5941 NC_012853.1 484669 485925 D PFAM: sodium/hydrogen exchanger; KEGG: rpc:RPC_1941 sodium/hydrogen exchanger; sodium/hydrogen exchanger 484669..485925 Rhizobium leguminosarum bv. trifolii WSM1325 8016361 YP_002979255.1 CDS Rleg_5942 NC_012853.1 486158 487399 D PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; KEGG: nwi:Nwi_2852 glycosyl transferase family protein; glycosyl transferase family 28 486158..487399 Rhizobium leguminosarum bv. trifolii WSM1325 8016362 YP_002979256.1 CDS Rleg_5943 NC_012853.1 487607 488140 D KEGG: rec:RHECIAT_CH0001455 hypothetical protein; hypothetical protein 487607..488140 Rhizobium leguminosarum bv. trifolii WSM1325 8016363 YP_002979257.1 CDS nhaA NC_012853.1 488221 489411 R exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter complement(488221..489411) Rhizobium leguminosarum bv. trifolii WSM1325 8016364 YP_002979258.1 CDS Rleg_5945 NC_012853.1 490485 490748 R TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: pca:Pcar_2528 caa3-type cytochrome c oxidase, subunit IV; caa(3)-type oxidase, subunit IV complement(490485..490748) Rhizobium leguminosarum bv. trifolii WSM1325 8016365 YP_002979259.1 CDS Rleg_5946 NC_012853.1 490751 491386 R PFAM: cytochrome c oxidase subunit III; KEGG: mno:Mnod_6884 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III complement(490751..491386) Rhizobium leguminosarum bv. trifolii WSM1325 8016366 YP_002979260.1 CDS Rleg_5947 NC_012853.1 491383 493047 R KEGG: noc:Noc_1245 cytochrome c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase, subunit I complement(491383..493047) Rhizobium leguminosarum bv. trifolii WSM1325 8016367 YP_002979261.1 CDS Rleg_5948 NC_012853.1 493034 493990 R TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: reu:Reut_B4435 cytochrome c oxidase, subunit II:cytochrome c, class I:cytochrome c oxidase subunit II, transmembrane region; cytochrome c oxidase, subunit II complement(493034..493990) Rhizobium leguminosarum bv. trifolii WSM1325 8016368 YP_002979262.1 CDS Rleg_5949 NC_012853.1 493983 494786 R KEGG: sus:Acid_0496 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(493983..494786) Rhizobium leguminosarum bv. trifolii WSM1325 8016369 YP_002979263.1 CDS Rleg_5950 NC_012853.1 494783 495157 R KEGG: gdj:Gdia_0830 hypothetical protein; hypothetical protein complement(494783..495157) Rhizobium leguminosarum bv. trifolii WSM1325 8016370 YP_002979264.1 CDS Rleg_5951 NC_012853.1 495154 496191 R KEGG: nha:Nham_4183 hypothetical protein; hypothetical protein complement(495154..496191) Rhizobium leguminosarum bv. trifolii WSM1325 8016371 YP_002979265.1 CDS Rleg_5952 NC_012853.1 496188 496715 R KEGG: mpo:Mpop_0021 hypothetical protein; hypothetical protein complement(496188..496715) Rhizobium leguminosarum bv. trifolii WSM1325 8016372 YP_002979266.1 CDS Rleg_5953 NC_012853.1 496712 497272 R KEGG: sus:Acid_0492 transmembrane prediction; transmembrane prediction complement(496712..497272) Rhizobium leguminosarum bv. trifolii WSM1325 8016373 YP_002979267.1 CDS Rleg_5954 NC_012853.1 497265 498602 R PFAM: Polysulphide reductase NrfD; KEGG: aba:Acid345_3002 polysulphide reductase, NrfD; polysulfide reductase NrfD complement(497265..498602) Rhizobium leguminosarum bv. trifolii WSM1325 8016374 YP_002979268.1 CDS Rleg_5955 NC_012853.1 498599 501427 R KEGG: mrd:Mrad2831_1043 molybdopterin oxidoreductase, iron-sulfur binding subunit; molybdopterin oxidoreductase, iron-sulfur binding subunit complement(498599..501427) Rhizobium leguminosarum bv. trifolii WSM1325 8016375 YP_002979269.1 CDS Rleg_5956 NC_012853.1 501431 502093 R KEGG: met:M446_5825 chaperone protein HtpG; chaperone protein HtpG complement(501431..502093) Rhizobium leguminosarum bv. trifolii WSM1325 8016376 YP_002979270.1 CDS Rleg_5957 NC_012853.1 502761 503315 D PFAM: protein of unknown function DUF1058; KEGG: hypothetical protein; hypothetical protein 502761..503315 Rhizobium leguminosarum bv. trifolii WSM1325 8016377 YP_002979271.1 CDS Rleg_5958 NC_012853.1 503529 503789 R KEGG: sme:SMa1192 hypothetical protein; hypothetical protein complement(503529..503789) Rhizobium leguminosarum bv. trifolii WSM1325 8016378 YP_002979272.1 CDS Rleg_5959 NC_012853.1 503918 504220 R KEGG: bac:BamMC406_6732 hypothetical protein; hypothetical protein complement(503918..504220) Rhizobium leguminosarum bv. trifolii WSM1325 8016379 YP_002979273.1 CDS Rleg_5960 NC_012853.1 504550 505125 D hypothetical protein 504550..505125 Rhizobium leguminosarum bv. trifolii WSM1325 8016380 YP_002979274.1 CDS Rleg_5961 NC_012853.1 505366 505860 D KEGG: ret:RHE_CH03931 hypothetical protein; hypothetical protein 505366..505860 Rhizobium leguminosarum bv. trifolii WSM1325 8016381 YP_002979275.1 CDS Rleg_5962 NC_012853.1 506899 507366 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bbr:BB2470 hypothetical protein; transcriptional regulator, MarR family 506899..507366 Rhizobium leguminosarum bv. trifolii WSM1325 8016382 YP_002979276.1 CDS Rleg_5963 NC_012853.1 507508 508569 D PFAM: protein of unknown function UPF0118; KEGG: mlo:mlr4869 hypothetical protein; hypothetical protein 507508..508569 Rhizobium leguminosarum bv. trifolii WSM1325 8016383 YP_002979277.1 CDS Rleg_5964 NC_012853.1 508870 509184 D KEGG: mlo:msl1788 hypothetical protein; hypothetical protein 508870..509184 Rhizobium leguminosarum bv. trifolii WSM1325 8016384 YP_002979278.1 CDS Rleg_5965 NC_012853.1 509383 511779 R KEGG: rpt:Rpal_3825 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family complement(509383..511779) Rhizobium leguminosarum bv. trifolii WSM1325 8016385 YP_002979279.1 CDS Rleg_5966 NC_012853.1 512352 512576 D hypothetical protein 512352..512576 Rhizobium leguminosarum bv. trifolii WSM1325 8016386 YP_002979280.1 CDS Rleg_5967 NC_012853.1 512624 512758 D hypothetical protein 512624..512758 Rhizobium leguminosarum bv. trifolii WSM1325 8016387 YP_002979281.1 CDS Rleg_5969 NC_012853.1 514022 514156 D hypothetical protein 514022..514156 Rhizobium leguminosarum bv. trifolii WSM1325 8016389 YP_002979282.1 CDS Rleg_5970 NC_012853.1 514440 514685 D hypothetical protein 514440..514685 Rhizobium leguminosarum bv. trifolii WSM1325 8016390 YP_002979283.1 CDS Rleg_5971 NC_012853.1 514745 516088 D PFAM: Chloride channel core; KEGG: chloride channel protein; Chloride channel core 514745..516088 Rhizobium leguminosarum bv. trifolii WSM1325 8016391 YP_002979284.1 CDS Rleg_6287 NC_012854.1 122 1300 D KEGG: bbt:BBta_6668 hypothetical protein; hypothetical protein 122..1300 Rhizobium leguminosarum bv. trifolii WSM1325 8017107 YP_002979285.1 CDS Rleg_6289 NC_012854.1 2547 2873 R KEGG: sal:Sala_0113 hypothetical protein; hypothetical protein complement(2547..2873) Rhizobium leguminosarum bv. trifolii WSM1325 8017095 YP_002979286.1 CDS Rleg_6290 NC_012854.1 3237 3734 D hypothetical protein 3237..3734 Rhizobium leguminosarum bv. trifolii WSM1325 8017020 YP_002979287.1 CDS Rleg_6291 NC_012854.1 3803 5080 D KEGG: glo:Glov_1418 hypothetical protein; hypothetical protein 3803..5080 Rhizobium leguminosarum bv. trifolii WSM1325 8017021 YP_002979288.1 CDS Rleg_6292 NC_012854.1 5370 5573 D PFAM: Cold-shock protein DNA-binding; Ribonuclease B OB region domain; SMART: Cold shock protein; KEGG: cspA; cold shock protein ; K03704 cold shock protein (beta-ribbon, CspA family); cold-shock DNA-binding domain protein 5370..5573 Rhizobium leguminosarum bv. trifolii WSM1325 8017022 YP_002979289.1 CDS Rleg_6293 NC_012854.1 5643 6431 D PFAM: protein of unknown function DUF88; KEGG: hypothetical protein; hypothetical protein 5643..6431 Rhizobium leguminosarum bv. trifolii WSM1325 8017023 YP_002979290.1 CDS Rleg_6294 NC_012854.1 6529 7896 D KEGG: rfr:Rfer_1186 hypothetical protein; hypothetical protein 6529..7896 Rhizobium leguminosarum bv. trifolii WSM1325 8017024 YP_002979291.1 CDS Rleg_6295 NC_012854.1 8146 8316 D hypothetical protein 8146..8316 Rhizobium leguminosarum bv. trifolii WSM1325 8017025 YP_002979292.1 CDS Rleg_6296 NC_012854.1 8310 9365 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: eum:ECUMN_2971 conserved hypothetical protein from bactreriophage origin; putative CBS domain; XRE family transcriptional regulator 8310..9365 Rhizobium leguminosarum bv. trifolii WSM1325 8017026 YP_002979293.1 CDS Rleg_6297 NC_012854.1 9828 11744 D KEGG: nar:Saro_3943 hypothetical protein; hypothetical protein 9828..11744 Rhizobium leguminosarum bv. trifolii WSM1325 8017027 YP_002979294.1 CDS Rleg_6298 NC_012854.1 11749 13344 D KEGG: nar:Saro_3944 hypothetical protein; hypothetical protein 11749..13344 Rhizobium leguminosarum bv. trifolii WSM1325 8017028 YP_002979295.1 CDS Rleg_6299 NC_012854.1 13365 14933 R KEGG: nar:Saro_3947 HSP90 family molecular chaperone-like protein; HSP90 family molecular chaperone-like protein complement(13365..14933) Rhizobium leguminosarum bv. trifolii WSM1325 8017029 YP_002979296.1 CDS Rleg_6300 NC_012854.1 14930 16561 R PFAM: Radical SAM domain protein; KEGG: nar:Saro_3946 radical SAM domain-containing protein; Radical SAM domain protein complement(14930..16561) Rhizobium leguminosarum bv. trifolii WSM1325 8017030 YP_002979297.1 CDS Rleg_6301 NC_012854.1 16554 17579 R TIGRFAM: DGQHR domain protein; KEGG: nar:Saro_3945 hypothetical protein; DGQHR domain protein complement(16554..17579) Rhizobium leguminosarum bv. trifolii WSM1325 8017031 YP_002979298.1 CDS Rleg_6302 NC_012854.1 17678 18691 R KEGG: ecm:EcSMS35_4320 hypothetical protein; hypothetical protein complement(17678..18691) Rhizobium leguminosarum bv. trifolii WSM1325 8017032 YP_002979299.1 CDS Rleg_6303 NC_012854.1 18688 20169 R PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: mxa:MXAN_7274 SNF2/helicase domain protein; helicase domain protein complement(18688..20169) Rhizobium leguminosarum bv. trifolii WSM1325 8017033 YP_002979300.1 CDS Rleg_6304 NC_012854.1 20177 20596 R hypothetical protein complement(20177..20596) Rhizobium leguminosarum bv. trifolii WSM1325 8017034 YP_002979301.1 CDS Rleg_6305 NC_012854.1 20601 21647 R hypothetical protein complement(20601..21647) Rhizobium leguminosarum bv. trifolii WSM1325 8017035 YP_002979302.1 CDS Rleg_6306 NC_012854.1 21800 24466 D KEGG: ppd:Ppro_0239 hypothetical protein; hypothetical protein 21800..24466 Rhizobium leguminosarum bv. trifolii WSM1325 8017036 YP_002979303.1 CDS Rleg_6307 NC_012854.1 24512 25636 R PFAM: protein of unknown function DUF1612; KEGG: atc:AGR_pAT_23 hypothetical protein; hypothetical protein complement(24512..25636) Rhizobium leguminosarum bv. trifolii WSM1325 8017037 YP_002979304.1 CDS Rleg_6308 NC_012854.1 25826 26116 D TIGRFAM: prevent-host-death family protein; KEGG: rec:RHECIAT_PC0000869 hypothetical protein; prevent-host-death family protein 25826..26116 Rhizobium leguminosarum bv. trifolii WSM1325 8017038 YP_002979305.1 CDS Rleg_6309 NC_012854.1 26113 26490 D KEGG: rec:RHECIAT_PC0000870 hypothetical protein; hypothetical protein 26113..26490 Rhizobium leguminosarum bv. trifolii WSM1325 8017039 YP_002979306.1 CDS Rleg_6310 NC_012854.1 26502 26831 D KEGG: sme:SMa2255 hypothetical protein; hypothetical protein 26502..26831 Rhizobium leguminosarum bv. trifolii WSM1325 8017040 YP_002979307.1 CDS Rleg_6311 NC_012854.1 26828 27970 D PFAM: integrase family protein; KEGG: ret:RHE_PA00002 site-specific integrase protein; integrase family protein 26828..27970 Rhizobium leguminosarum bv. trifolii WSM1325 8017041 YP_002979308.1 CDS Rleg_6312 NC_012854.1 28089 28337 D PFAM: Rv0623 family protein transcription factor; KEGG: rru:Rru_A1269 transcription factor; Rv0623 family protein transcription factor 28089..28337 Rhizobium leguminosarum bv. trifolii WSM1325 8017042 YP_002979309.1 CDS Rleg_6313 NC_012854.1 28334 28720 D PFAM: PilT protein domain protein; KEGG: nha:Nham_4577 PilT protein-like; PilT protein domain protein 28334..28720 Rhizobium leguminosarum bv. trifolii WSM1325 8017043 YP_002979310.1 CDS Rleg_6315 NC_012854.1 29391 30698 R PFAM: replication protein C; KEGG: ret:RHE_PC00234 plasmid replication protein RepCc; replication initiation protein RepC complement(29391..30698) Rhizobium leguminosarum bv. trifolii WSM1325 8017096 YP_002979311.1 CDS Rleg_6316 NC_012854.1 30898 31887 R KEGG: ret:RHE_PC00233 plasmid partitioning protein RepBc; TIGRFAM: plasmid partitioning protein RepB; parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; SMART: ParB domain protein nuclease; plasmid partitioning protein RepB complement(30898..31887) Rhizobium leguminosarum bv. trifolii WSM1325 8017045 YP_002979312.1 CDS Rleg_6317 NC_012854.1 31884 33101 R TIGRFAM: plasmid partitioning protein RepA; PFAM: Cobyrinic acid ac-diamide synthase; regulatory protein MerR; KEGG: ret:RHE_PC00232 plasmid partitioning protein RepAc; plasmid partitioning protein RepA complement(31884..33101) Rhizobium leguminosarum bv. trifolii WSM1325 8017046 YP_002979313.1 CDS Rleg_6318 NC_012854.1 34404 35489 R KEGG: ret:RHE_PC00229 hypothetical protein; hypothetical protein complement(34404..35489) Rhizobium leguminosarum bv. trifolii WSM1325 8017047 YP_002979314.1 CDS Rleg_6319 NC_012854.1 35635 36393 D KEGG: ret:RHE_PC00228 trehalose-phosphatase protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase; PFAM: trehalose-phosphatase; Haloacid dehalogenase domain protein hydrolase type 3; HAD-superfamily hydrolase, subfamily IIB 35635..36393 Rhizobium leguminosarum bv. trifolii WSM1325 8017048 YP_002979315.1 CDS Rleg_6320 NC_012854.1 36592 37476 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_PC00227 AraC family transcriptional regulator; AraC family transcriptional regulator 36592..37476 Rhizobium leguminosarum bv. trifolii WSM1325 8017049 YP_002979316.1 CDS Rleg_6321 NC_012854.1 37700 38764 D KEGG: ret:RHE_PC00226 putative sugar ABC transporter, substrate-binding protein; putative sugar ABC transporter, substrate-binding protein 37700..38764 Rhizobium leguminosarum bv. trifolii WSM1325 8017050 YP_002979317.1 CDS Rleg_6322 NC_012854.1 38836 39657 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00225 sugar ABC transporter, ATP-binding protein; ABC transporter 38836..39657 Rhizobium leguminosarum bv. trifolii WSM1325 8017051 YP_002979318.1 CDS Rleg_6323 NC_012854.1 39654 40913 D PFAM: inner-membrane translocator; KEGG: ret:RHE_PC00224 sugar ABC transporter, permease protein; inner-membrane translocator 39654..40913 Rhizobium leguminosarum bv. trifolii WSM1325 8017190 YP_002979319.1 CDS Rleg_6324 NC_012854.1 40940 41668 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PC00223 ribitol 2-dehydrogenase protein; short-chain dehydrogenase/reductase SDR 40940..41668 Rhizobium leguminosarum bv. trifolii WSM1325 8016938 YP_002979320.1 CDS Rleg_6325 NC_012854.1 41721 42485 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_PC00222 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 41721..42485 Rhizobium leguminosarum bv. trifolii WSM1325 8016939 YP_002979321.1 CDS Rleg_6326 NC_012854.1 42662 43057 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(42662..43057) Rhizobium leguminosarum bv. trifolii WSM1325 8016940 YP_002979322.1 CDS Rleg_6327 NC_012854.1 43144 43569 R KEGG: hypothetical protein; hypothetical protein complement(43144..43569) Rhizobium leguminosarum bv. trifolii WSM1325 8016941 YP_002979323.1 CDS Rleg_6328 NC_012854.1 43691 44290 D PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein; TetR family transcriptional regulator 43691..44290 Rhizobium leguminosarum bv. trifolii WSM1325 8016942 YP_002979324.1 CDS Rleg_6329 NC_012854.1 44405 45427 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bid:Bind_3301 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(44405..45427) Rhizobium leguminosarum bv. trifolii WSM1325 8016943 YP_002979325.1 CDS Rleg_6330 NC_012854.1 45427 46131 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bra:BRADO3955 OmpR family two-component transcriptional regulator; two component transcriptional regulator, winged helix family complement(45427..46131) Rhizobium leguminosarum bv. trifolii WSM1325 8016944 YP_002979326.1 CDS Rleg_6331 NC_012854.1 46179 47675 R KEGG: bja:blr7618 hypothetical protein; hypothetical protein complement(46179..47675) Rhizobium leguminosarum bv. trifolii WSM1325 8016945 YP_002979327.1 CDS Rleg_6332 NC_012854.1 48261 48449 R KEGG: smd:Smed_3631 hypothetical protein; hypothetical protein complement(48261..48449) Rhizobium leguminosarum bv. trifolii WSM1325 8016946 YP_002979328.1 CDS Rleg_6333 NC_012854.1 48645 49358 R KEGG: ret:RHE_PC00209 autoaggregation protein; autoaggregation protein complement(48645..49358) Rhizobium leguminosarum bv. trifolii WSM1325 8016947 YP_002979329.1 CDS Rleg_6334 NC_012854.1 49629 49730 R hypothetical protein complement(49629..49730) Rhizobium leguminosarum bv. trifolii WSM1325 8016948 YP_002979330.1 CDS Rleg_6335 NC_012854.1 49812 49964 D KEGG: hypothetical protein; hypothetical protein 49812..49964 Rhizobium leguminosarum bv. trifolii WSM1325 8016949 YP_002979331.1 CDS rpsU NC_012854.1 50004 50240 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 50004..50240 Rhizobium leguminosarum bv. trifolii WSM1325 8016950 YP_002979332.1 CDS Rleg_6337 NC_012854.1 50301 50495 D hypothetical protein 50301..50495 Rhizobium leguminosarum bv. trifolii WSM1325 8016951 YP_002979333.1 CDS Rleg_6338 NC_012854.1 50603 51082 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ret:RHE_PC00206 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding 50603..51082 Rhizobium leguminosarum bv. trifolii WSM1325 8016952 YP_002979334.1 CDS Rleg_6339 NC_012854.1 51303 52172 R PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 domain of unknown function DUF1814; hypothetical protein complement(51303..52172) Rhizobium leguminosarum bv. trifolii WSM1325 8016953 YP_002979335.1 CDS Rleg_6340 NC_012854.1 52165 52782 R KEGG: smd:Smed_5453 hypothetical protein; hypothetical protein complement(52165..52782) Rhizobium leguminosarum bv. trifolii WSM1325 8016954 YP_002979336.1 CDS Rleg_6341 NC_012854.1 53201 54112 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PC00205 LysR family transcriptional regulator; LysR family transcriptional regulator complement(53201..54112) Rhizobium leguminosarum bv. trifolii WSM1325 8016955 YP_002979337.1 CDS Rleg_6342 NC_012854.1 54212 55087 D PFAM: aldo/keto reductase; KEGG: ret:RHE_PC00204 putative oxidoreductase; putative oxidoreductase 54212..55087 Rhizobium leguminosarum bv. trifolii WSM1325 8016956 YP_002979338.1 CDS Rleg_6343 NC_012854.1 55122 57281 R PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rce:RC1_2728 colicin V secretion; ABC transporter complement(55122..57281) Rhizobium leguminosarum bv. trifolii WSM1325 8016957 YP_002979339.1 CDS Rleg_6344 NC_012854.1 57291 58454 R PFAM: secretion protein HlyD family protein; KEGG: rce:RC1_2734 HlyD family secretion protein; secretion protein HlyD family protein complement(57291..58454) Rhizobium leguminosarum bv. trifolii WSM1325 8016958 YP_002979340.1 CDS Rleg_6345 NC_012854.1 58589 58798 R KEGG: mex:Mext_0452 hypothetical protein; hypothetical protein complement(58589..58798) Rhizobium leguminosarum bv. trifolii WSM1325 8016959 YP_002979341.1 CDS Rleg_6346 NC_012854.1 59040 59231 R hypothetical protein complement(59040..59231) Rhizobium leguminosarum bv. trifolii WSM1325 8016960 YP_002979342.1 CDS Rleg_6347 NC_012854.1 59228 59863 R KEGG: hypothetical protein; hypothetical protein complement(59228..59863) Rhizobium leguminosarum bv. trifolii WSM1325 8016961 YP_002979343.1 CDS Rleg_6348 NC_012854.1 59960 61849 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; KEGG: bpt:Bpet2621 putative peptidase; peptidase S9 prolyl oligopeptidase active site domain protein complement(59960..61849) Rhizobium leguminosarum bv. trifolii WSM1325 8016962 YP_002979344.1 CDS Rleg_6349 NC_012854.1 61996 62910 R PFAM: protein of unknown function DUF344; KEGG: ret:RHE_PC00203 hypothetical protein; hypothetical protein complement(61996..62910) Rhizobium leguminosarum bv. trifolii WSM1325 8016963 YP_002979345.1 CDS Rleg_6350 NC_012854.1 63022 63873 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: transcriptional regulator; XRE family transcriptional regulator complement(63022..63873) Rhizobium leguminosarum bv. trifolii WSM1325 8016964 YP_002979346.1 CDS Rleg_6351 NC_012854.1 63946 64335 R KEGG: hypothetical protein; hypothetical protein complement(63946..64335) Rhizobium leguminosarum bv. trifolii WSM1325 8016965 YP_002979347.1 CDS Rleg_6352 NC_012854.1 64657 65577 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: met:M446_0008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 64657..65577 Rhizobium leguminosarum bv. trifolii WSM1325 8016966 YP_002979348.1 CDS Rleg_6353 NC_012854.1 65608 67260 R KEGG: ret:RHE_PC00202 putative oxidoreductase protein; putative oxidoreductase protein complement(65608..67260) Rhizobium leguminosarum bv. trifolii WSM1325 8016967 YP_002979349.1 CDS Rleg_6354 NC_012854.1 67344 68426 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PC00201 sugar ABC transporter, ATP-binding protein; ABC transporter complement(67344..68426) Rhizobium leguminosarum bv. trifolii WSM1325 8016968 YP_002979350.1 CDS Rleg_6355 NC_012854.1 68434 69318 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00200 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(68434..69318) Rhizobium leguminosarum bv. trifolii WSM1325 8016969 YP_002979351.1 CDS Rleg_6356 NC_012854.1 69318 70205 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00199 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(69318..70205) Rhizobium leguminosarum bv. trifolii WSM1325 8016970 YP_002979352.1 CDS Rleg_6357 NC_012854.1 70308 71540 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PC00198 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 complement(70308..71540) Rhizobium leguminosarum bv. trifolii WSM1325 8016971 YP_002979353.1 CDS Rleg_6358 NC_012854.1 71599 72549 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PC00197 putative myo-inositol catabolism protein; Xylose isomerase domain protein TIM barrel complement(71599..72549) Rhizobium leguminosarum bv. trifolii WSM1325 8016972 YP_002979354.1 CDS Rleg_6359 NC_012854.1 72772 73842 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_PC00196 LacI family transcription regulator; transcriptional regulator, LacI family 72772..73842 Rhizobium leguminosarum bv. trifolii WSM1325 8016973 YP_002979355.1 CDS Rleg_6360 NC_012854.1 74045 74323 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: xac:XAC2429 hypothetical protein; transcriptional regulator, CopG family 74045..74323 Rhizobium leguminosarum bv. trifolii WSM1325 8016974 YP_002979356.1 CDS Rleg_6361 NC_012854.1 74311 74601 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: xac:XAC2428 hypothetical protein; addiction module toxin, RelE/StbE family 74311..74601 Rhizobium leguminosarum bv. trifolii WSM1325 8016975 YP_002979357.1 CDS Rleg_6362 NC_012854.1 74766 75209 D PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ret:RHE_PC00192 acetyl-CoA carboxylase, biotin carboxyl carrier protein; biotin/lipoyl attachment domain-containing protein 74766..75209 Rhizobium leguminosarum bv. trifolii WSM1325 8016976 YP_002979358.1 CDS Rleg_6363 NC_012854.1 75209 76594 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; protein of unknown function DUF201; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: ret:RHE_PC00191 acetyl-CoA carboxylase, biotin carboxylase protein; acetyl-CoA carboxylase, biotin carboxylase 75209..76594 Rhizobium leguminosarum bv. trifolii WSM1325 8016977 YP_002979359.1 CDS Rleg_6364 NC_012854.1 76591 77028 D KEGG: ret:RHE_PC00190 hypothetical protein; hypothetical protein 76591..77028 Rhizobium leguminosarum bv. trifolii WSM1325 8016978 YP_002979360.1 CDS Rleg_6365 NC_012854.1 77025 77732 D PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: ret:RHE_PC00189 hypothetical protein; Allophanate hydrolase subunit 1 77025..77732 Rhizobium leguminosarum bv. trifolii WSM1325 8016979 YP_002979361.1 CDS Rleg_6366 NC_012854.1 77729 78724 D KEGG: ret:RHE_PC00188 hypothetical protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase related protein 77729..78724 Rhizobium leguminosarum bv. trifolii WSM1325 8016980 YP_002979362.1 CDS Rleg_6367 NC_012854.1 78762 79529 D PFAM: LamB/YcsF family protein; KEGG: ret:RHE_PC00187 hypothetical protein; LamB/YcsF family protein 78762..79529 Rhizobium leguminosarum bv. trifolii WSM1325 8016981 YP_002979363.1 CDS Rleg_6368 NC_012854.1 79590 80792 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 79590..80792 Rhizobium leguminosarum bv. trifolii WSM1325 8016982 YP_002979364.1 CDS Rleg_6369 NC_012854.1 80888 81793 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PC00185 LysR family transcriptional regulator; LysR family transcriptional regulator complement(80888..81793) Rhizobium leguminosarum bv. trifolii WSM1325 8016983 YP_002979365.1 CDS Rleg_6370 NC_012854.1 82040 82819 D PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_PC00184 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 82040..82819 Rhizobium leguminosarum bv. trifolii WSM1325 8016984 YP_002979366.1 CDS Rleg_6371 NC_012854.1 82816 83523 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00183 amino acid ABC transporter permease; polar amino acid ABC transporter, inner membrane subunit 82816..83523 Rhizobium leguminosarum bv. trifolii WSM1325 8016985 YP_002979367.1 CDS Rleg_6372 NC_012854.1 83520 84278 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00182 amino acid ABC transporter permease; polar amino acid ABC transporter, inner membrane subunit 83520..84278 Rhizobium leguminosarum bv. trifolii WSM1325 8016986 YP_002979368.1 CDS Rleg_6373 NC_012854.1 84275 85039 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00181 amino acid ABC transporter ATP-binding protein; ABC transporter 84275..85039 Rhizobium leguminosarum bv. trifolii WSM1325 8016987 YP_002979369.1 CDS Rleg_6374 NC_012854.1 85071 85907 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ret:RHE_PC00180 amino acid ABC transporter substrate-binding protein; extracellular solute-binding protein family 3 85071..85907 Rhizobium leguminosarum bv. trifolii WSM1325 8016988 YP_002979370.1 CDS Rleg_6375 NC_012854.1 85999 86673 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: atc:AGR_L_1159 hypothetical protein; Dimethylmenaquinone methyltransferase 85999..86673 Rhizobium leguminosarum bv. trifolii WSM1325 8016989 YP_002979371.1 CDS Rleg_6376 NC_012854.1 86844 88028 D KEGG: ret:RHE_PC00178 hypothetical protein; hypothetical protein 86844..88028 Rhizobium leguminosarum bv. trifolii WSM1325 8016990 YP_002979372.1 CDS Rleg_6377 NC_012854.1 88044 89057 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: ret:RHE_PC00177 hypothetical protein; Succinylglutamate desuccinylase/aspartoacylase complement(88044..89057) Rhizobium leguminosarum bv. trifolii WSM1325 8016991 YP_002979373.1 CDS Rleg_6378 NC_012854.1 89088 89432 R PFAM: Endoribonuclease L-PSP; KEGG: ret:RHE_PC00176 hypothetical protein; Endoribonuclease L-PSP complement(89088..89432) Rhizobium leguminosarum bv. trifolii WSM1325 8016992 YP_002979374.1 CDS Rleg_6379 NC_012854.1 89469 90779 R KEGG: ret:RHE_PC00175 hypothetical protein; hypothetical protein complement(89469..90779) Rhizobium leguminosarum bv. trifolii WSM1325 8016993 YP_002979375.1 CDS Rleg_6380 NC_012854.1 90772 91728 R PFAM: amidohydrolase 2; KEGG: ret:RHE_PC00174 hypothetical protein; amidohydrolase 2 complement(90772..91728) Rhizobium leguminosarum bv. trifolii WSM1325 8016994 YP_002979376.1 CDS Rleg_6381 NC_012854.1 91725 92666 R PFAM: inner-membrane translocator; KEGG: ret:RHE_PC00173 sugar ABC transporter, permease protein; inner-membrane translocator complement(91725..92666) Rhizobium leguminosarum bv. trifolii WSM1325 8016995 YP_002979377.1 CDS Rleg_6382 NC_012854.1 92663 93625 R PFAM: inner-membrane translocator; KEGG: bms:BRA0994 ribose ABC transporter, permease protein; inner-membrane translocator complement(92663..93625) Rhizobium leguminosarum bv. trifolii WSM1325 8016996 YP_002979378.1 CDS Rleg_6383 NC_012854.1 93622 95136 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00172 sugar ABC transporter, ATP-binding protein; ABC transporter complement(93622..95136) Rhizobium leguminosarum bv. trifolii WSM1325 8016997 YP_002979379.1 CDS Rleg_6384 NC_012854.1 95171 96310 R KEGG: ret:RHE_PC00171 sugar ABC transporter, substrate-binding protein; sugar ABC transporter substrate-binding protein complement(95171..96310) Rhizobium leguminosarum bv. trifolii WSM1325 8016998 YP_002979380.1 CDS Rleg_6385 NC_012854.1 96464 97249 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ret:RHE_PC00170 IclR family transcriptional regulator; transcriptional regulator, IclR family 96464..97249 Rhizobium leguminosarum bv. trifolii WSM1325 8016999 YP_002979381.1 CDS Rleg_6386 NC_012854.1 97654 99006 D KEGG: ret:RHE_PC00169 monooxygenase protein; monooxygenase protein 97654..99006 Rhizobium leguminosarum bv. trifolii WSM1325 8017000 YP_002979382.1 CDS Rleg_6387 NC_012854.1 99017 99868 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00168 aliphatic sulfonate ABC transporter permease; binding-protein-dependent transport systems inner membrane component 99017..99868 Rhizobium leguminosarum bv. trifolii WSM1325 8017001 YP_002979383.1 CDS Rleg_6388 NC_012854.1 99909 100892 D KEGG: ret:RHE_PC00167 aliphatic sulfonate ABC transporter substrate-binding protein; aliphatic sulfonate ABC transporter substrate-binding protein 99909..100892 Rhizobium leguminosarum bv. trifolii WSM1325 8017002 YP_002979384.1 CDS Rleg_6389 NC_012854.1 100902 101672 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00166 aliphatic sulfonate ABC transporter ATP-binding protein; ABC transporter 100902..101672 Rhizobium leguminosarum bv. trifolii WSM1325 8017003 YP_002979385.1 CDS Rleg_6390 NC_012854.1 101763 103577 R PFAM: Chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ret:RHE_PC00165 chloride channel protein; Chloride channel core complement(101763..103577) Rhizobium leguminosarum bv. trifolii WSM1325 8017004 YP_002979386.1 CDS Rleg_6391 NC_012854.1 103780 104214 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ret:RHE_PC00164 MarR family transcriptional regulator; transcriptional regulator, MarR family 103780..104214 Rhizobium leguminosarum bv. trifolii WSM1325 8017005 YP_002979387.1 CDS Rleg_6392 NC_012854.1 104250 105158 R PFAM: homocysteine S-methyltransferase; KEGG: ret:RHE_PC00163 homocysteine S-methyltransferase protein; homocysteine S-methyltransferase complement(104250..105158) Rhizobium leguminosarum bv. trifolii WSM1325 8017006 YP_002979388.1 CDS Rleg_6393 NC_012854.1 105280 105969 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00162 amino acid ABC transporter permease; polar amino acid ABC transporter, inner membrane subunit complement(105280..105969) Rhizobium leguminosarum bv. trifolii WSM1325 8017007 YP_002979389.1 CDS Rleg_6394 NC_012854.1 105982 106707 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00161 amino acid ABC transporter permease; polar amino acid ABC transporter, inner membrane subunit complement(105982..106707) Rhizobium leguminosarum bv. trifolii WSM1325 8017008 YP_002979390.1 CDS Rleg_6395 NC_012854.1 106720 107493 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ret:RHE_PC00160 amino acid ABC transporter substrate-binding protein; extracellular solute-binding protein family 3 complement(106720..107493) Rhizobium leguminosarum bv. trifolii WSM1325 8017009 YP_002979391.1 CDS Rleg_6396 NC_012854.1 107546 108325 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00159 amino acid ABC transporter ATP-binding protein; ABC transporter complement(107546..108325) Rhizobium leguminosarum bv. trifolii WSM1325 8017010 YP_002979392.1 CDS Rleg_6397 NC_012854.1 108489 108953 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ret:RHE_PC00158 AsnC family transcriptional regulator; transcriptional regulator, AsnC family 108489..108953 Rhizobium leguminosarum bv. trifolii WSM1325 8017011 YP_002979393.1 CDS Rleg_6398 NC_012854.1 109076 110461 D KEGG: ret:RHE_PC00157 two-component sensor histidine kinase protein; PFAM: Cache type 2 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase 109076..110461 Rhizobium leguminosarum bv. trifolii WSM1325 8017012 YP_002979394.1 CDS Rleg_6399 NC_012854.1 110458 111102 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; LexA DNA-binding domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ret:RHE_PC00156 two-component response regulator protein; two component transcriptional regulator, LuxR family 110458..111102 Rhizobium leguminosarum bv. trifolii WSM1325 8017013 YP_002979395.1 CDS Rleg_6400 NC_012854.1 111374 111571 D KEGG: ret:RHE_PC00155 hypothetical protein; hypothetical protein 111374..111571 Rhizobium leguminosarum bv. trifolii WSM1325 8017014 YP_002979396.1 CDS Rleg_6401 NC_012854.1 111561 113036 D PFAM: Na+/solute symporter; KEGG: ret:RHE_PC00154 monocarboxylic acid permease protein; Na+/solute symporter 111561..113036 Rhizobium leguminosarum bv. trifolii WSM1325 8017015 YP_002979397.1 CDS Rleg_6402 NC_012854.1 113127 115193 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ret:RHE_PC00153 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(113127..115193) Rhizobium leguminosarum bv. trifolii WSM1325 8017016 YP_002979398.1 CDS Rleg_6403 NC_012854.1 115614 116750 R PFAM: Luciferase-like monooxygenase; KEGG: ret:RHE_PC00151 putative FMNH2-dependent aliphatic sulfonate monooxygenase protein; Alkanesulfonate monooxygenase complement(115614..116750) Rhizobium leguminosarum bv. trifolii WSM1325 8017017 YP_002979399.1 CDS Rleg_6404 NC_012854.1 116747 118120 R KEGG: scl:sce5568 nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A complement(116747..118120) Rhizobium leguminosarum bv. trifolii WSM1325 8017018 YP_002979400.1 CDS Rleg_6405 NC_012854.1 118156 118905 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce0167 ABC transporter ATP-binding protein; ABC transporter complement(118156..118905) Rhizobium leguminosarum bv. trifolii WSM1325 8016904 YP_002979401.1 CDS Rleg_6406 NC_012854.1 118881 119771 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll9180 permease of ABC transporter; binding-protein-dependent transport systems inner membrane component complement(118881..119771) Rhizobium leguminosarum bv. trifolii WSM1325 8016905 YP_002979402.1 CDS Rleg_6407 NC_012854.1 119806 120831 R KEGG: mlo:mll9181 hypothetical protein; hypothetical protein complement(119806..120831) Rhizobium leguminosarum bv. trifolii WSM1325 8016906 YP_002979403.1 CDS Rleg_6408 NC_012854.1 121156 121494 R KEGG: ret:RHE_PC00150 hypothetical protein; hypothetical protein complement(121156..121494) Rhizobium leguminosarum bv. trifolii WSM1325 8016907 YP_002979404.1 CDS Rleg_6409 NC_012854.1 121590 122687 R KEGG: ret:RHE_PC00149 putative sugar ABC transporter, substrate-binding protein; putative sugar ABC transporter, substrate-binding protein complement(121590..122687) Rhizobium leguminosarum bv. trifolii WSM1325 8016908 YP_002979405.1 CDS Rleg_6410 NC_012854.1 122739 123779 R PFAM: inner-membrane translocator; KEGG: ret:RHE_PC00148 sugar ABC transporter, permease protein; inner-membrane translocator complement(122739..123779) Rhizobium leguminosarum bv. trifolii WSM1325 8016909 YP_002979406.1 CDS Rleg_6411 NC_012854.1 123798 125294 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00147 sugar ABC transporter, ATP-binding protein; ABC transporter complement(123798..125294) Rhizobium leguminosarum bv. trifolii WSM1325 8016910 YP_002979407.1 CDS Rleg_6412 NC_012854.1 125400 126293 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: ret:RHE_PC00146 6-phosphogluconatedehydrogenase protein; 2-hydroxy-3-oxopropionate reductase complement(125400..126293) Rhizobium leguminosarum bv. trifolii WSM1325 8016911 YP_002979408.1 CDS Rleg_6413 NC_012854.1 126283 126840 R KEGG: ret:RHE_PC00145 gluconate kinase protein; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; carbohydrate kinase, thermoresistant glucokinase family complement(126283..126840) Rhizobium leguminosarum bv. trifolii WSM1325 8016912 YP_002979409.1 CDS Rleg_6414 NC_012854.1 126854 127618 R catalyzes the formation of 5-dehydro-D-gluconate from D-gluconate; gluconate 5-dehydrogenase complement(126854..127618) Rhizobium leguminosarum bv. trifolii WSM1325 8016913 YP_002979410.1 CDS Rleg_6415 NC_012854.1 127755 128696 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ret:RHE_PC00143 D-2-hydroxyacid dehydrogensase protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 127755..128696 Rhizobium leguminosarum bv. trifolii WSM1325 8016914 YP_002979411.1 CDS Rleg_6416 NC_012854.1 128707 129738 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ret:RHE_PC00142 L-idonate 5-dehydrogenase protein; Alcohol dehydrogenase GroES domain protein 128707..129738 Rhizobium leguminosarum bv. trifolii WSM1325 8016915 YP_002979412.1 CDS Rleg_6417 NC_012854.1 129815 130891 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ret:RHE_PC00141 LacI family transcription regulator; transcriptional regulator, LacI family complement(129815..130891) Rhizobium leguminosarum bv. trifolii WSM1325 8016916 YP_002979413.1 CDS Rleg_6418 NC_012854.1 131118 132044 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ret:RHE_PC00140 gluconolactonase protein; Gluconolactonase 131118..132044 Rhizobium leguminosarum bv. trifolii WSM1325 8016917 YP_002979414.1 CDS Rleg_6419 NC_012854.1 132109 134229 R PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: ret:RHE_PC00139 hypothetical protein; von Willebrand factor type A complement(132109..134229) Rhizobium leguminosarum bv. trifolii WSM1325 8016918 YP_002979415.1 CDS Rleg_6420 NC_012854.1 134226 134750 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: ret:RHE_PC00138 RNA polymerase sigma-E factor; RNA polymerase, sigma-24 subunit, ECF subfamily complement(134226..134750) Rhizobium leguminosarum bv. trifolii WSM1325 8016919 YP_002979416.1 CDS Rleg_6421 NC_012854.1 134975 135886 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ret:RHE_PC00137 lipase/esterase protein; Alpha/beta hydrolase fold-3 domain protein 134975..135886 Rhizobium leguminosarum bv. trifolii WSM1325 8016920 YP_002979417.1 CDS Rleg_6422 NC_012854.1 135890 137893 R PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: ret:RHE_PC00136 hypothetical protein; peptidase S15 complement(135890..137893) Rhizobium leguminosarum bv. trifolii WSM1325 8016921 YP_002979418.1 CDS Rleg_6423 NC_012854.1 137945 139576 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00133 peptide ABC transporter, ATP-binding protein; ABC transporter complement(137945..139576) Rhizobium leguminosarum bv. trifolii WSM1325 8016922 YP_002979419.1 CDS Rleg_6424 NC_012854.1 139569 140396 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00132 peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(139569..140396) Rhizobium leguminosarum bv. trifolii WSM1325 8016923 YP_002979420.1 CDS Rleg_6425 NC_012854.1 140393 141397 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00131 peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(140393..141397) Rhizobium leguminosarum bv. trifolii WSM1325 8016924 YP_002979421.1 CDS Rleg_6426 NC_012854.1 141495 143084 R PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_PC00130 peptide ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 complement(141495..143084) Rhizobium leguminosarum bv. trifolii WSM1325 8016925 YP_002979422.1 CDS Rleg_6427 NC_012854.1 143203 143985 R catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; carnitinyl-CoA dehydratase complement(143203..143985) Rhizobium leguminosarum bv. trifolii WSM1325 8016926 YP_002979423.1 CDS Rleg_6428 NC_012854.1 143992 146046 R PFAM: CoA-binding domain protein; KEGG: ret:RHE_PC00128 acyl-CoA synthetase protein; CoA-binding domain protein complement(143992..146046) Rhizobium leguminosarum bv. trifolii WSM1325 8016927 YP_002979424.1 CDS Rleg_6429 NC_012854.1 146051 147211 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ret:RHE_PC00127 acyl-CoA dehydrogenase protein; Butyryl-CoA dehydrogenase complement(146051..147211) Rhizobium leguminosarum bv. trifolii WSM1325 8016928 YP_002979425.1 CDS Rleg_6430 NC_012854.1 147222 148712 R Converts (S)-3-hydroxyacyl-CoA to 3-oxyacyl-CoA; may also act as a thioesterase; bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase complement(147222..148712) Rhizobium leguminosarum bv. trifolii WSM1325 8016929 YP_002979426.1 CDS Rleg_6431 NC_012854.1 148720 149622 R PFAM: protein of unknown function DUF849; KEGG: ret:RHE_PC00125 hypothetical protein; hypothetical protein complement(148720..149622) Rhizobium leguminosarum bv. trifolii WSM1325 8016930 YP_002979427.1 CDS Rleg_6432 NC_012854.1 149723 150721 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_PC00124 AraC family transcriptional regulator; AraC family transcriptional regulator 149723..150721 Rhizobium leguminosarum bv. trifolii WSM1325 8016931 YP_002979428.1 CDS Rleg_6433 NC_012854.1 150696 151571 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PC00123 LysR family transcriptional regulator; LysR family transcriptional regulator complement(150696..151571) Rhizobium leguminosarum bv. trifolii WSM1325 8016932 YP_002979429.1 CDS Rleg_6434 NC_012854.1 151683 152588 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_PC00122 hypothetical protein; hypothetical protein 151683..152588 Rhizobium leguminosarum bv. trifolii WSM1325 8016933 YP_002979430.1 CDS Rleg_6435 NC_012854.1 153174 154364 D TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ret:RHE_PC00119 glutathione-independent formaldehyde dehydrogenase protein; formaldehyde dehydrogenase, glutathione-independent 153174..154364 Rhizobium leguminosarum bv. trifolii WSM1325 8016934 YP_002979431.1 CDS Rleg_6436 NC_012854.1 154440 155246 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ret:RHE_PC00118 amino acid ABC transporter substrate-binding protein; extracellular solute-binding protein family 3 complement(154440..155246) Rhizobium leguminosarum bv. trifolii WSM1325 8016935 YP_002979432.1 CDS Rleg_6437 NC_012854.1 155373 157739 D KEGG: ret:RHE_PC00117 putative kinase/esterase protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 155373..157739 Rhizobium leguminosarum bv. trifolii WSM1325 8016936 YP_002979433.1 CDS Rleg_6438 NC_012854.1 157820 158404 D PFAM: isochorismatase hydrolase; KEGG: ret:RHE_PC00116 hypothetical protein; isochorismatase hydrolase 157820..158404 Rhizobium leguminosarum bv. trifolii WSM1325 8016937 YP_002979434.1 CDS Rleg_6439 NC_012854.1 158595 159650 R TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: speB; agmatinase ; K01480 agmatinase; agmatinase complement(158595..159650) Rhizobium leguminosarum bv. trifolii WSM1325 8017052 YP_002979435.1 CDS Rleg_6440 NC_012854.1 159747 160910 D PFAM: aminotransferase class I and II; KEGG: aspB2; aspartate transaminase protein; hypothetical protein 159747..160910 Rhizobium leguminosarum bv. trifolii WSM1325 8017108 YP_002979436.1 CDS Rleg_6441 NC_012854.1 160887 161426 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rec:RHECIAT_PC0000729 putative flavin reductase protein; flavin reductase domain protein FMN-binding complement(160887..161426) Rhizobium leguminosarum bv. trifolii WSM1325 8017109 YP_002979437.1 CDS Rleg_6442 NC_012854.1 161423 162778 R KEGG: monooxygenase protein; monooxygenase protein complement(161423..162778) Rhizobium leguminosarum bv. trifolii WSM1325 8017110 YP_002979438.1 CDS Rleg_6443 NC_012854.1 162892 163830 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: transcriptional regulator protein; LysR family transcriptional regulator complement(162892..163830) Rhizobium leguminosarum bv. trifolii WSM1325 8017111 YP_002979439.1 CDS Rleg_6444 NC_012854.1 163861 164565 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: hutC; histidine utilization repressor; GntR family transcriptional regulator complement(163861..164565) Rhizobium leguminosarum bv. trifolii WSM1325 8017112 YP_002979440.1 CDS Rleg_6445 NC_012854.1 164796 165623 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: amino acid ABC transporter; extracellular solute-binding protein family 3 164796..165623 Rhizobium leguminosarum bv. trifolii WSM1325 8017113 YP_002979441.1 CDS Rleg_6446 NC_012854.1 165722 166363 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amino acid ABC transporter; polar amino acid ABC transporter, inner membrane subunit 165722..166363 Rhizobium leguminosarum bv. trifolii WSM1325 8017114 YP_002979442.1 CDS Rleg_6447 NC_012854.1 166360 167028 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amino acid ABC transporter; polar amino acid ABC transporter, inner membrane subunit 166360..167028 Rhizobium leguminosarum bv. trifolii WSM1325 8017115 YP_002979443.1 CDS Rleg_6448 NC_012854.1 167025 167816 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amino acid ABC transporter; ABC transporter 167025..167816 Rhizobium leguminosarum bv. trifolii WSM1325 8017116 YP_002979444.1 CDS Rleg_6449 NC_012854.1 167868 168221 R KEGG: ret:RHE_PE00109 hypothetical protein; anti-ECFsigma factor, ChrR complement(167868..168221) Rhizobium leguminosarum bv. trifolii WSM1325 8017117 YP_002979445.1 CDS Rleg_6450 NC_012854.1 168214 168882 R PFAM: isochorismatase hydrolase; KEGG: ret:RHE_PE00110 putative isochorismatase hydrolase protein; isochorismatase hydrolase complement(168214..168882) Rhizobium leguminosarum bv. trifolii WSM1325 8017118 YP_002979446.1 CDS Rleg_6451 NC_012854.1 168882 170432 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PC0000087 probable sugar ABC transporter, ATP-binding protein; ABC transporter complement(168882..170432) Rhizobium leguminosarum bv. trifolii WSM1325 8017119 YP_002979447.1 CDS Rleg_6452 NC_012854.1 170434 171489 R TIGRFAM: ring-opening amidohydrolase; KEGG: cyanuric acid amidohydrolase; ring-opening amidohydrolase complement(170434..171489) Rhizobium leguminosarum bv. trifolii WSM1325 8017120 YP_002979448.1 CDS Rleg_6453 NC_012854.1 171489 172193 R PFAM: isochorismatase hydrolase; KEGG: ret:RHE_PE00112 putative isochorismatase protein; isochorismatase hydrolase complement(171489..172193) Rhizobium leguminosarum bv. trifolii WSM1325 8017121 YP_002979449.1 CDS amiF NC_012854.1 172202 173218 R formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate; formamidase complement(172202..173218) Rhizobium leguminosarum bv. trifolii WSM1325 8017122 YP_002979450.1 CDS Rleg_6455 NC_012854.1 173231 174157 R PFAM: inner-membrane translocator; KEGG: ret:RHE_PE00113 sugar ABC transporter, permease protein; inner-membrane translocator complement(173231..174157) Rhizobium leguminosarum bv. trifolii WSM1325 8017123 YP_002979451.1 CDS Rleg_6456 NC_012854.1 174157 175284 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000090 probable sugar ABC transporter, permease protein; inner-membrane translocator complement(174157..175284) Rhizobium leguminosarum bv. trifolii WSM1325 8017124 YP_002979452.1 CDS Rleg_6457 NC_012854.1 175305 176432 R PFAM: basic membrane lipoprotein; KEGG: rec:RHECIAT_PC0000091 putative ABC transporter, substrate-binding protein; basic membrane lipoprotein complement(175305..176432) Rhizobium leguminosarum bv. trifolii WSM1325 8017125 YP_002979453.1 CDS Rleg_6458 NC_012854.1 176794 177444 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_PC0000092 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator 176794..177444 Rhizobium leguminosarum bv. trifolii WSM1325 8017126 YP_002979454.1 CDS Rleg_6459 NC_012854.1 177527 178324 R KEGG: rec:RHECIAT_PC0000679 nitrate ABC transporter, ATP-binding protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter, ATPase subunits C and D complement(177527..178324) Rhizobium leguminosarum bv. trifolii WSM1325 8017127 YP_002979455.1 CDS Rleg_6460 NC_012854.1 178336 179229 R TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00453 nitrate ABC transporter, permease protein; nitrate ABC transporter, inner membrane subunit complement(178336..179229) Rhizobium leguminosarum bv. trifolii WSM1325 8017128 YP_002979456.1 CDS Rleg_6461 NC_012854.1 179286 180599 R KEGG: rec:RHECIAT_PC0000677 nitrate ABC transporter, substrate-binding protein; nitrate ABC transporter, substrate-binding protein complement(179286..180599) Rhizobium leguminosarum bv. trifolii WSM1325 8017129 YP_002979457.1 CDS Rleg_6462 NC_012854.1 180969 181880 R PFAM: inner-membrane translocator; KEGG: ret:RHE_PC00085 sugar ABC transporter, permease protein; inner-membrane translocator complement(180969..181880) Rhizobium leguminosarum bv. trifolii WSM1325 8017130 YP_002979458.1 CDS Rleg_6463 NC_012854.1 181877 182977 R PFAM: inner-membrane translocator; KEGG: ret:RHE_PC00086 sugar ABC transporter, permease protein; inner-membrane translocator complement(181877..182977) Rhizobium leguminosarum bv. trifolii WSM1325 8017131 YP_002979459.1 CDS Rleg_6464 NC_012854.1 182977 184497 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00087 sugar ABC transporter, ATP-binding protein; ABC transporter complement(182977..184497) Rhizobium leguminosarum bv. trifolii WSM1325 8017132 YP_002979460.1 CDS Rleg_6465 NC_012854.1 184501 185598 R PFAM: basic membrane lipoprotein; KEGG: ret:RHE_PC00088 hypothetical protein; basic membrane lipoprotein complement(184501..185598) Rhizobium leguminosarum bv. trifolii WSM1325 8017133 YP_002979461.1 CDS Rleg_6466 NC_012854.1 185625 187004 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ret:RHE_PC00089 hydrolase protein; amidohydrolase complement(185625..187004) Rhizobium leguminosarum bv. trifolii WSM1325 8017134 YP_002979462.1 CDS Rleg_6467 NC_012854.1 187006 187665 R PFAM: Glutathione S-transferase domain; KEGG: ret:RHE_PC00090 glutathione S-transferase protein; Glutathione S-transferase domain protein complement(187006..187665) Rhizobium leguminosarum bv. trifolii WSM1325 8017135 YP_002979463.1 CDS Rleg_6468 NC_012854.1 187662 188507 R KEGG: ret:RHE_PC00091 hypothetical protein; hypothetical protein complement(187662..188507) Rhizobium leguminosarum bv. trifolii WSM1325 8017136 YP_002979464.1 CDS Rleg_6469 NC_012854.1 188504 189157 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: ret:RHE_PC00092 oxidoreductase protein; Rieske (2Fe-2S) domain protein complement(188504..189157) Rhizobium leguminosarum bv. trifolii WSM1325 8017137 YP_002979465.1 CDS Rleg_6470 NC_012854.1 189313 189579 R KEGG: ret:RHE_PC00093 hypothetical protein; hypothetical protein complement(189313..189579) Rhizobium leguminosarum bv. trifolii WSM1325 8017138 YP_002979466.1 CDS Rleg_6471 NC_012854.1 189770 190663 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_2294 transcriptional regulator; LysR family transcriptional regulator complement(189770..190663) Rhizobium leguminosarum bv. trifolii WSM1325 8017139 YP_002979467.1 CDS Rleg_6472 NC_012854.1 190779 191411 D KEGG: mlo:mll3417 hypothetical protein; hypothetical protein 190779..191411 Rhizobium leguminosarum bv. trifolii WSM1325 8017140 YP_002979468.1 CDS Rleg_6473 NC_012854.1 191531 192412 D PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_2292 metallo-beta-lactamase superfamily protein; beta-lactamase domain protein 191531..192412 Rhizobium leguminosarum bv. trifolii WSM1325 8017141 YP_002979469.1 CDS Rleg_6474 NC_012854.1 192943 193752 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fhuC; ABC transporter nucleotide binding/ATPase protein (ferrichrome) ; K02013 iron complex transport system ATP-binding protein; ABC transporter 192943..193752 Rhizobium leguminosarum bv. trifolii WSM1325 8017142 YP_002979470.1 CDS Rleg_6475 NC_012854.1 193766 194644 D PFAM: periplasmic binding protein; KEGG: fhuD; ABC transporter substrate binding protein (ferrichrome) ; K02016 iron complex transport system substrate-binding protein; periplasmic binding protein 193766..194644 Rhizobium leguminosarum bv. trifolii WSM1325 8017143 YP_002979471.1 CDS Rleg_6476 NC_012854.1 194644 196614 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 194644..196614 Rhizobium leguminosarum bv. trifolii WSM1325 8017144 YP_002979472.1 CDS Rleg_6478 NC_012854.1 199230 200111 R KEGG: esterase; esterase complement(199230..200111) Rhizobium leguminosarum bv. trifolii WSM1325 8017097 YP_002979473.1 CDS Rleg_6479 NC_012854.1 200957 201196 D TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0156; KEGG: pmy:Pmen_2127 CopG/Arc/MetJ family transcriptional regulator; putative addiction module antidote protein, CopG/Arc/MetJ family 200957..201196 Rhizobium leguminosarum bv. trifolii WSM1325 8017146 YP_002979474.1 CDS Rleg_6480 NC_012854.1 201193 201438 D KEGG: sme:SMa0572 hypothetical protein; hypothetical protein 201193..201438 Rhizobium leguminosarum bv. trifolii WSM1325 8017147 YP_002979475.1 CDS Rleg_6481 NC_012854.1 201648 201953 D PFAM: PhnA protein; KEGG: mno:Mnod_7168 PhnA protein; PhnA protein 201648..201953 Rhizobium leguminosarum bv. trifolii WSM1325 8017148 YP_002979476.1 CDS Rleg_6482 NC_012854.1 201974 202387 R KEGG: xau:Xaut_4992 hypothetical protein; hypothetical protein complement(201974..202387) Rhizobium leguminosarum bv. trifolii WSM1325 8017149 YP_002979477.1 CDS Rleg_6483 NC_012854.1 202387 202653 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rec:RHECIAT_PC0000250 hypothetical protein; prevent-host-death family protein complement(202387..202653) Rhizobium leguminosarum bv. trifolii WSM1325 8017150 YP_002979478.1 CDS Rleg_6486 NC_012854.1 204027 205571 D PFAM: filamentation induced by cAMP protein Fic; KEGG: pde:Pden_1534 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic 204027..205571 Rhizobium leguminosarum bv. trifolii WSM1325 8017099 YP_002979479.1 CDS Rleg_6487 NC_012854.1 205685 206110 D hypothetical protein 205685..206110 Rhizobium leguminosarum bv. trifolii WSM1325 8017152 YP_002979480.1 CDS Rleg_6488 NC_012854.1 206184 206495 D KEGG: transposase; transposase 206184..206495 Rhizobium leguminosarum bv. trifolii WSM1325 8017153 YP_002979481.1 CDS Rleg_6490 NC_012854.1 207050 207364 R KEGG: rec:RHECIAT_PB0000162 transport secretion system IV protein, VirB5; hypothetical protein complement(207050..207364) Rhizobium leguminosarum bv. trifolii WSM1325 8017100 YP_002979482.1 CDS Rleg_6492 NC_012854.1 207686 208348 R KEGG: rec:RHECIAT_PC0000911 transport secretion system IV protein, VirB1; transport secretion system IV protein, VirB1 complement(207686..208348) Rhizobium leguminosarum bv. trifolii WSM1325 8017101 YP_002979483.1 CDS Rleg_6493 NC_012854.1 208352 208867 R KEGG: ret:RHE_PD00142 hypothetical protein; hypothetical protein complement(208352..208867) Rhizobium leguminosarum bv. trifolii WSM1325 8017156 YP_002979484.1 CDS Rleg_6494 NC_012854.1 208959 209315 D KEGG: rec:RHECIAT_PC0000913 hypothetical protein; hypothetical protein 208959..209315 Rhizobium leguminosarum bv. trifolii WSM1325 8017157 YP_002979485.1 CDS Rleg_6496 NC_012854.1 209872 210858 D PFAM: UbiA prenyltransferase; KEGG: noc:Noc_1948 UbiA prenyltransferase; UbiA prenyltransferase 209872..210858 Rhizobium leguminosarum bv. trifolii WSM1325 8017102 YP_002979486.1 CDS Rleg_6497 NC_012854.1 210855 211559 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pna:Pnap_2974 haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 1 210855..211559 Rhizobium leguminosarum bv. trifolii WSM1325 8017159 YP_002979487.1 CDS Rleg_6498 NC_012854.1 211556 211921 D PFAM: GtrA family protein; KEGG: bat:BAS5286 GtrA family protein; GtrA family protein 211556..211921 Rhizobium leguminosarum bv. trifolii WSM1325 8017160 YP_002979488.1 CDS Rleg_6499 NC_012854.1 212142 212471 R KEGG: hypothetical protein; hypothetical protein complement(212142..212471) Rhizobium leguminosarum bv. trifolii WSM1325 8017161 YP_002979489.1 CDS Rleg_6500 NC_012854.1 212987 214384 R E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(212987..214384) Rhizobium leguminosarum bv. trifolii WSM1325 8017162 YP_002979490.1 CDS Rleg_6501 NC_012854.1 214390 215628 R PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: ret:RHE_PC00072 branched-chain alpha-keto acid dehydrogenase subunit E2; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(214390..215628) Rhizobium leguminosarum bv. trifolii WSM1325 8017163 YP_002979491.1 CDS Rleg_6502 NC_012854.1 215632 216630 R PFAM: Transketolase central region; Transketolase domain protein; KEGG: ret:RHE_PC00071 2-oxoisovalerate dehydrogenase beta subunit protein; Transketolase central region complement(215632..216630) Rhizobium leguminosarum bv. trifolii WSM1325 8017164 YP_002979492.1 CDS Rleg_6503 NC_012854.1 216647 217879 R PFAM: dehydrogenase E1 component; KEGG: ret:RHE_PC00070 2-oxoisovalerate dehydrogenase alpha subunit protein; 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) complement(216647..217879) Rhizobium leguminosarum bv. trifolii WSM1325 8017165 YP_002979493.1 CDS Rleg_6504 NC_012854.1 217944 219071 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ret:RHE_PC00069 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain protein complement(217944..219071) Rhizobium leguminosarum bv. trifolii WSM1325 8017166 YP_002979494.1 CDS Rleg_6505 NC_012854.1 219088 220275 R KEGG: ret:RHE_PC00068 thiolase protein; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(219088..220275) Rhizobium leguminosarum bv. trifolii WSM1325 8017167 YP_002979495.1 CDS Rleg_6506 NC_012854.1 220299 221066 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PC00067 3-hydroxyacyl-CoA dehydrogenase protein; short-chain dehydrogenase/reductase SDR complement(220299..221066) Rhizobium leguminosarum bv. trifolii WSM1325 8017168 YP_002979496.1 CDS Rleg_6507 NC_012854.1 221200 222234 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_PC00066 AraC family transcriptional regulator; AraC family transcriptional regulator 221200..222234 Rhizobium leguminosarum bv. trifolii WSM1325 8017169 YP_002979497.1 CDS Rleg_6509 NC_012854.1 222618 222878 R TIGRFAM: prevent-host-death family protein; KEGG: xau:Xaut_5007 prevent-host-death family protein; prevent-host-death family protein complement(222618..222878) Rhizobium leguminosarum bv. trifolii WSM1325 8017103 YP_002979498.1 CDS Rleg_6510 NC_012854.1 223037 224182 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ret:RHE_PC00064 isovaleryl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain protein 223037..224182 Rhizobium leguminosarum bv. trifolii WSM1325 8017171 YP_002979499.1 CDS Rleg_6511 NC_012854.1 224179 225789 D PFAM: carboxyl transferase; KEGG: ret:RHE_PC00063 methylcrotonoyl-CoA carboxylase non-biotinylated subunit protein; Methylcrotonoyl-CoA carboxylase 224179..225789 Rhizobium leguminosarum bv. trifolii WSM1325 8017172 YP_002979500.1 CDS Rleg_6512 NC_012854.1 225797 227662 D PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: ret:RHE_PC00062 methylcrotonoyl-CoA carboxylase biotinylated subunit protein; Carbamoyl-phosphate synthase L chain ATP-binding 225797..227662 Rhizobium leguminosarum bv. trifolii WSM1325 8017173 YP_002979501.1 CDS Rleg_6513 NC_012854.1 227662 228114 D PFAM: MaoC domain protein dehydratase; KEGG: ret:RHE_PC00061 putative amine oxidase protein; MaoC domain protein dehydratase 227662..228114 Rhizobium leguminosarum bv. trifolii WSM1325 8017174 YP_002979502.1 CDS Rleg_6514 NC_012854.1 228111 228947 D PFAM: HpcH/HpaI aldolase; KEGG: ret:RHE_PC00060 citrate lyase, beta subunit protein; HpcH/HpaI aldolase 228111..228947 Rhizobium leguminosarum bv. trifolii WSM1325 8017175 YP_002979503.1 CDS Rleg_6515 NC_012854.1 228965 230398 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ret:RHE_PC00059 nodulation protein; RND efflux system, outer membrane lipoprotein, NodT family complement(228965..230398) Rhizobium leguminosarum bv. trifolii WSM1325 8017176 YP_002979504.1 CDS Rleg_6516 NC_012854.1 230517 231806 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: ret:RHE_PC00058 two-component sensor histidine kinase protein; histidine kinase complement(230517..231806) Rhizobium leguminosarum bv. trifolii WSM1325 8017177 YP_002979505.1 CDS Rleg_6517 NC_012854.1 231809 232495 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ret:RHE_PC00057 two-component response regulator protein; two component transcriptional regulator, winged helix family complement(231809..232495) Rhizobium leguminosarum bv. trifolii WSM1325 8017178 YP_002979506.1 CDS Rleg_6518 NC_012854.1 233434 234177 R hypothetical protein complement(233434..234177) Rhizobium leguminosarum bv. trifolii WSM1325 8017179 YP_002979507.1 CDS Rleg_6520 NC_012854.1 234515 235657 R PFAM: peptidase M24; creatinase; KEGG: map1; methionine aminopeptidase protein; peptidase M24 complement(234515..235657) Rhizobium leguminosarum bv. trifolii WSM1325 8017104 YP_002979508.1 CDS Rleg_6521 NC_012854.1 235780 237078 D PFAM: alpha/beta hydrolase fold; KEGG: mmw:Mmwyl1_2460 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 235780..237078 Rhizobium leguminosarum bv. trifolii WSM1325 8017181 YP_002979509.1 CDS Rleg_6522 NC_012854.1 237108 237812 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PC00043 AsnC/GntR family transcriptional regulator protein; GntR family transcriptional regulator complement(237108..237812) Rhizobium leguminosarum bv. trifolii WSM1325 8017182 YP_002979510.1 CDS Rleg_6523 NC_012854.1 237962 238873 D PFAM: dihydrodipicolinate synthetase; KEGG: ret:RHE_PC00042 dihydrodipicolinate synthetase protein; dihydrodipicolinate synthetase 237962..238873 Rhizobium leguminosarum bv. trifolii WSM1325 8017183 YP_002979511.1 CDS Rleg_6524 NC_012854.1 238924 240024 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: smd:Smed_2142 ABC transporter related; ABC transporter complement(238924..240024) Rhizobium leguminosarum bv. trifolii WSM1325 8017184 YP_002979512.1 CDS Rleg_6525 NC_012854.1 240034 241977 R PFAM: protein of unknown function DUF1680; KEGG: smd:Smed_2143 protein of unknown function DUF1680; hypothetical protein complement(240034..241977) Rhizobium leguminosarum bv. trifolii WSM1325 8017185 YP_002979513.1 CDS Rleg_6526 NC_012854.1 242005 242874 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2144 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(242005..242874) Rhizobium leguminosarum bv. trifolii WSM1325 8017186 YP_002979514.1 CDS Rleg_6527 NC_012854.1 242874 243797 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2145 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(242874..243797) Rhizobium leguminosarum bv. trifolii WSM1325 8017187 YP_002979515.1 CDS Rleg_6528 NC_012854.1 243880 245127 R PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_2146 extracellular solute-binding protein family 1; extracellular solute-binding protein family 1 complement(243880..245127) Rhizobium leguminosarum bv. trifolii WSM1325 8017188 YP_002979516.1 CDS Rleg_6529 NC_012854.1 245307 246323 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: smd:Smed_2147 periplasmic binding protein/LacI transcriptional regulator; transcriptional regulator, LacI family 245307..246323 Rhizobium leguminosarum bv. trifolii WSM1325 8017189 YP_002979517.1 CDS Rleg_6530 NC_012854.1 246366 247424 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ret:RHE_PC00041 LacI family transcription regulator; transcriptional regulator, LacI family complement(246366..247424) Rhizobium leguminosarum bv. trifolii WSM1325 8017053 YP_002979518.1 CDS Rleg_6531 NC_012854.1 247565 249886 D PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: ret:RHE_PC00040 putative alpha-L-rhamnosidase protein; alpha-L-rhamnosidase 247565..249886 Rhizobium leguminosarum bv. trifolii WSM1325 8017054 YP_002979519.1 CDS Rleg_6532 NC_012854.1 249924 251207 D PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PC00039 sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 249924..251207 Rhizobium leguminosarum bv. trifolii WSM1325 8017055 YP_002979520.1 CDS Rleg_6533 NC_012854.1 251274 252152 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00038 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 251274..252152 Rhizobium leguminosarum bv. trifolii WSM1325 8017056 YP_002979521.1 CDS Rleg_6534 NC_012854.1 252149 252976 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00037 sugar ABC transporter, substrate-binding protein; binding-protein-dependent transport systems inner membrane component 252149..252976 Rhizobium leguminosarum bv. trifolii WSM1325 8017057 YP_002979522.1 CDS Rleg_6535 NC_012854.1 252981 253958 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PC00036 sugar ABC transporter, ATP-binding protein; ABC transporter 252981..253958 Rhizobium leguminosarum bv. trifolii WSM1325 8017058 YP_002979523.1 CDS Rleg_6536 NC_012854.1 254093 254341 D KEGG: sme:SM_b21509 putative plasmid stability protein; putative plasmid stability protein 254093..254341 Rhizobium leguminosarum bv. trifolii WSM1325 8017059 YP_002979524.1 CDS Rleg_6537 NC_012854.1 254316 255116 D hypothetical protein 254316..255116 Rhizobium leguminosarum bv. trifolii WSM1325 8017060 YP_002979525.1 CDS Rleg_6538 NC_012854.1 255142 255645 D KEGG: pfl:PFL_5484 hypothetical protein; hypothetical protein 255142..255645 Rhizobium leguminosarum bv. trifolii WSM1325 8017061 YP_002979526.1 CDS Rleg_6539 NC_012854.1 255661 256524 R KEGG: ret:RHE_PC00033 hypothetical protein; hypothetical protein complement(255661..256524) Rhizobium leguminosarum bv. trifolii WSM1325 8017062 YP_002979527.1 CDS Rleg_6540 NC_012854.1 256499 257953 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ret:RHE_PC00032 succinate-semialdehyde dehydrogenase protein; succinic semialdehyde dehydrogenase complement(256499..257953) Rhizobium leguminosarum bv. trifolii WSM1325 8017063 YP_002979528.1 CDS Rleg_6541 NC_012854.1 257964 259043 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PC00031 polyamine ABC transporter ATP-binding protein; ABC transporter complement(257964..259043) Rhizobium leguminosarum bv. trifolii WSM1325 8017064 YP_002979529.1 CDS Rleg_6542 NC_012854.1 259040 259840 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00030 polyamine ABC transporter permease; binding-protein-dependent transport systems inner membrane component complement(259040..259840) Rhizobium leguminosarum bv. trifolii WSM1325 8017065 YP_002979530.1 CDS Rleg_6543 NC_012854.1 259842 260714 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00029 polyamine ABC transporter permease; binding-protein-dependent transport systems inner membrane component complement(259842..260714) Rhizobium leguminosarum bv. trifolii WSM1325 8017066 YP_002979531.1 CDS Rleg_6544 NC_012854.1 260827 261837 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PC00028 polyamine ABC transporter substrate-binding protein; extracellular solute-binding protein family 1 complement(260827..261837) Rhizobium leguminosarum bv. trifolii WSM1325 8017067 YP_002979532.1 CDS Rleg_6545 NC_012854.1 261886 262209 R PFAM: NIPSNAP family containing protein; KEGG: ret:RHE_PC00027 hypothetical protein; NIPSNAP family containing protein complement(261886..262209) Rhizobium leguminosarum bv. trifolii WSM1325 8017068 YP_002979533.1 CDS Rleg_6546 NC_012854.1 262215 263678 R PFAM: Aldehyde Dehydrogenase; KEGG: ret:RHE_PC00026 aldehyde dehydrogenase protein; Betaine-aldehyde dehydrogenase complement(262215..263678) Rhizobium leguminosarum bv. trifolii WSM1325 8017069 YP_002979534.1 CDS Rleg_6547 NC_012854.1 263683 264723 R PFAM: Luciferase-like monooxygenase; KEGG: ret:RHE_PC00025 monooxygenase protein; Luciferase-like monooxygenase complement(263683..264723) Rhizobium leguminosarum bv. trifolii WSM1325 8017070 YP_002979535.1 CDS Rleg_6548 NC_012854.1 264720 265655 R PFAM: flavin reductase domain protein FMN-binding; KEGG: ret:RHE_PC00024 flavoprotein oxidoreductase protein; flavin reductase domain protein FMN-binding complement(264720..265655) Rhizobium leguminosarum bv. trifolii WSM1325 8017071 YP_002979536.1 CDS Rleg_6549 NC_012854.1 265652 266497 R PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PC00023 hydrolase protein; alpha/beta hydrolase fold protein complement(265652..266497) Rhizobium leguminosarum bv. trifolii WSM1325 8017072 YP_002979537.1 CDS Rleg_6550 NC_012854.1 266512 267114 R PFAM: protein of unknown function DUF1185; KEGG: ret:RHE_PC00022 hypothetical protein; hypothetical protein complement(266512..267114) Rhizobium leguminosarum bv. trifolii WSM1325 8017073 YP_002979538.1 CDS Rleg_6551 NC_012854.1 267525 268217 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PC00021 GntR family transcriptional regulator; GntR family transcriptional regulator complement(267525..268217) Rhizobium leguminosarum bv. trifolii WSM1325 8017074 YP_002979539.1 CDS Rleg_6552 NC_012854.1 268420 269781 R KEGG: ret:RHE_PC00020 hypothetical protein; hypothetical protein complement(268420..269781) Rhizobium leguminosarum bv. trifolii WSM1325 8017075 YP_002979540.1 CDS Rleg_6553 NC_012854.1 270046 270327 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: ret:RHE_PC00002 hypothetical protein; prevent-host-death family protein 270046..270327 Rhizobium leguminosarum bv. trifolii WSM1325 8017076 YP_002979541.1 CDS Rleg_6554 NC_012854.1 270725 271570 R PFAM: Domain of unknown function DUF1814; KEGG: bja:bll1927 hypothetical protein; hypothetical protein complement(270725..271570) Rhizobium leguminosarum bv. trifolii WSM1325 8017077 YP_002979542.1 CDS Rleg_6555 NC_012854.1 271560 272180 R KEGG: bja:bll1928 hypothetical protein; hypothetical protein complement(271560..272180) Rhizobium leguminosarum bv. trifolii WSM1325 8017078 YP_002979543.1 CDS Rleg_6557 NC_012854.1 272541 275828 R TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: traA; Ti-type conjugative transfer relaxase TraA; Ti-type conjugative transfer relaxase TraA complement(272541..275828) Rhizobium leguminosarum bv. trifolii WSM1325 8017105 YP_002979544.1 CDS Rleg_6558 NC_012854.1 276115 276426 D KEGG: mobilization protein C; mobilization protein C 276115..276426 Rhizobium leguminosarum bv. trifolii WSM1325 8017080 YP_002979545.1 CDS Rleg_6559 NC_012854.1 276423 278108 D PFAM: TRAG family protein; KEGG: traG; Ti-type conjugative transfer system protein TraG ; K03205 type IV secretion system protein VirD4; TRAG family protein 276423..278108 Rhizobium leguminosarum bv. trifolii WSM1325 8017081 YP_002979546.1 CDS Rleg_6560 NC_012854.1 278200 278445 D PFAM: WGR domain protein; SMART: WGR domain protein; KEGG: hypothetical protein; WGR domain protein 278200..278445 Rhizobium leguminosarum bv. trifolii WSM1325 8017082 YP_002979547.1 CDS Rleg_6561 NC_012854.1 278509 279429 R PFAM: domain of unknown function DUF1738; KEGG: rec:RHECIAT_PB0000154 probable DNA conjugal transfer antirestriction protein; hypothetical protein complement(278509..279429) Rhizobium leguminosarum bv. trifolii WSM1325 8017083 YP_002979548.1 CDS Rleg_6562 NC_012854.1 279696 280586 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator complement(279696..280586) Rhizobium leguminosarum bv. trifolii WSM1325 8017084 YP_002979549.1 CDS Rleg_6563 NC_012854.1 280692 280910 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rpa:RPA2243 XRE family transcriptional regulator; XRE family transcriptional regulator 280692..280910 Rhizobium leguminosarum bv. trifolii WSM1325 8017085 YP_002979550.1 CDS Rleg_6564 NC_012854.1 281415 281915 R PFAM: Ankyrin; SMART: Ankyrin; KEGG: similar to ankyrin 2,3/unc44; Ankyrin complement(281415..281915) Rhizobium leguminosarum bv. trifolii WSM1325 8017086 YP_002979551.1 CDS Rleg_6565 NC_012854.1 281912 282202 R hypothetical protein complement(281912..282202) Rhizobium leguminosarum bv. trifolii WSM1325 8017087 YP_002979552.1 CDS Rleg_6567 NC_012854.1 282424 283965 R PFAM: Peptidase M15A; protein of unknown function DUF882; KEGG: ccs:CCNA_00583 hypothetical protein; Peptidase M15A complement(282424..283965) Rhizobium leguminosarum bv. trifolii WSM1325 8017106 YP_002979553.1 CDS Rleg_6568 NC_012854.1 283987 284895 R hypothetical protein complement(283987..284895) Rhizobium leguminosarum bv. trifolii WSM1325 8017089 YP_002979554.1 CDS Rleg_6569 NC_012854.1 284968 286371 R hypothetical protein complement(284968..286371) Rhizobium leguminosarum bv. trifolii WSM1325 8017090 YP_002979555.1 CDS Rleg_6570 NC_012854.1 286806 287771 R hypothetical protein complement(286806..287771) Rhizobium leguminosarum bv. trifolii WSM1325 8017091 YP_002979556.1 CDS Rleg_6571 NC_012854.1 288555 290456 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: hypothetical protein; peptidase C14 caspase catalytic subunit p20 complement(288555..290456) Rhizobium leguminosarum bv. trifolii WSM1325 8017092 YP_002979557.1 CDS Rleg_6572 NC_012854.1 290453 293941 R PFAM: peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat protein; KEGG: mgm:Mmc1_3477 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(290453..293941) Rhizobium leguminosarum bv. trifolii WSM1325 8017093 YP_002979558.1 CDS Rleg_6573 NC_012854.1 293938 294492 R hypothetical protein complement(293938..294492) Rhizobium leguminosarum bv. trifolii WSM1325 8017094 YP_002984577.1 CDS Rleg_6574 NC_012858.1 80 763 D PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_PA0000338 putative transcriptional regulator protein; XRE family transcriptional regulator 80..763 Rhizobium leguminosarum bv. trifolii WSM1325 8022941 YP_002984578.1 CDS Rleg_6575 NC_012858.1 852 1760 D PFAM: glutamine amidotransferase class-II; KEGG: glxB; amidophosphoribosyl transferase protein; glutamine amidotransferase class-II 852..1760 Rhizobium leguminosarum bv. trifolii WSM1325 8022825 YP_002984579.1 CDS Rleg_6576 NC_012858.1 1799 2485 D PFAM: glutamate synthase alpha subunit domain protein; KEGG: smd:Smed_3292 glutamate synthase alpha subunit domain protein; glutamate synthase alpha subunit domain protein 1799..2485 Rhizobium leguminosarum bv. trifolii WSM1325 8022826 YP_002984580.1 CDS Rleg_6577 NC_012858.1 2500 3828 D PFAM: ferredoxin-dependent glutamate synthase; KEGG: sme:SMc02612 putative oxidoreductase protein; ferredoxin-dependent glutamate synthase 2500..3828 Rhizobium leguminosarum bv. trifolii WSM1325 8022827 YP_002984581.1 CDS Rleg_6578 NC_012858.1 3912 5219 D TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: ret:RHE_PE00418 glutamine sinthetase protein; glutamine synthetase, type III 3912..5219 Rhizobium leguminosarum bv. trifolii WSM1325 8022828 YP_002984582.1 CDS purU NC_012858.1 5412 6296 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 5412..6296 Rhizobium leguminosarum bv. trifolii WSM1325 8022829 YP_002984583.1 CDS Rleg_6580 NC_012858.1 6446 7579 D PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: aminomethyltransferase protein ; K00605 aminomethyltransferase; glycine cleavage T protein (aminomethyl transferase) 6446..7579 Rhizobium leguminosarum bv. trifolii WSM1325 8022830 YP_002984584.1 CDS Rleg_6581 NC_012858.1 7591 8196 D KEGG: ret:RHE_PE00414 hypothetical protein; hypothetical protein 7591..8196 Rhizobium leguminosarum bv. trifolii WSM1325 8022831 YP_002984585.1 CDS Rleg_6582 NC_012858.1 8193 9158 D PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ret:RHE_PE00413 ferredoxin protein; ferredoxin 8193..9158 Rhizobium leguminosarum bv. trifolii WSM1325 8022832 YP_002984586.1 CDS Rleg_6583 NC_012858.1 9190 10230 D KEGG: ret:RHE_PE00412 hypothetical protein; SNP /replace=G; hypothetical protein 9190..10230 Rhizobium leguminosarum bv. trifolii WSM1325 8022833 YP_002984587.1 CDS Rleg_6584 NC_012858.1 10271 11608 D PFAM: flavin-containing monooxygenase FMO; KEGG: ret:RHE_PE00411 monooxygenase protein; flavin-containing monooxygenase FMO 10271..11608 Rhizobium leguminosarum bv. trifolii WSM1325 8022834 YP_002984588.1 CDS Rleg_6585 NC_012858.1 11721 12323 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: ret:RHE_PE00410 putative chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 11721..12323 Rhizobium leguminosarum bv. trifolii WSM1325 8022835 YP_002984589.1 CDS minC NC_012858.1 12533 13252 D blocks the formation of polar Z-ring septums; septum formation inhibitor 12533..13252 Rhizobium leguminosarum bv. trifolii WSM1325 8022836 YP_002984590.1 CDS Rleg_6587 NC_012858.1 13335 14153 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ret:RHE_PE00408 cell division inhibitor MinD protein; septum site-determining protein MinD 13335..14153 Rhizobium leguminosarum bv. trifolii WSM1325 8022837 YP_002984591.1 CDS minE NC_012858.1 14150 14410 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 14150..14410 Rhizobium leguminosarum bv. trifolii WSM1325 8022838 YP_002984592.1 CDS Rleg_6589 NC_012858.1 14452 14832 R KEGG: hypothetical protein; hypothetical protein complement(14452..14832) Rhizobium leguminosarum bv. trifolii WSM1325 8022839 YP_002984593.1 CDS Rleg_6590 NC_012858.1 14968 15192 R KEGG: hypothetical protein; SNP /replace=C; hypothetical protein complement(14968..15192) Rhizobium leguminosarum bv. trifolii WSM1325 8022840 YP_002984594.1 CDS Rleg_6591 NC_012858.1 15321 15530 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cold shock protein ; K03704 cold shock protein (beta-ribbon, CspA family); cold-shock DNA-binding domain protein complement(15321..15530) Rhizobium leguminosarum bv. trifolii WSM1325 8022841 YP_002984595.1 CDS Rleg_6592 NC_012858.1 15812 18181 R PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: ret:RHE_PE00406 aminomethyltransferase protein; glycine cleavage T protein (aminomethyl transferase) complement(15812..18181) Rhizobium leguminosarum bv. trifolii WSM1325 8022842 YP_002984596.1 CDS Rleg_6593 NC_012858.1 18432 20216 D PFAM: amino acid permease-associated region; KEGG: ret:RHE_PE00405 amino acid transporter, permease protein; amino acid permease-associated region 18432..20216 Rhizobium leguminosarum bv. trifolii WSM1325 8022843 YP_002984597.1 CDS Rleg_6594 NC_012858.1 20374 21405 R PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_PA0000323 probable alcohol dehydrogenase protein; aldo/keto reductase complement(20374..21405) Rhizobium leguminosarum bv. trifolii WSM1325 8022844 YP_002984598.1 CDS Rleg_6595 NC_012858.1 21637 22908 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: ret:RHE_PE00403 putative amine oxidase protein; amine oxidase complement(21637..22908) Rhizobium leguminosarum bv. trifolii WSM1325 8022845 YP_002984599.1 CDS Rleg_6596 NC_012858.1 22972 23394 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: hypothetical protein; MarR family transcriptional regulator complement(22972..23394) Rhizobium leguminosarum bv. trifolii WSM1325 8022846 YP_002984600.1 CDS Rleg_6597 NC_012858.1 23485 24375 D catalyzes the cleavage of carbon-halogen bonds in aliphatic compounds forming a primary alcohol and a halide; haloalkane dehalogenase 23485..24375 Rhizobium leguminosarum bv. trifolii WSM1325 8022847 YP_002984601.1 CDS Rleg_6598 NC_012858.1 24471 24734 D KEGG: ret:RHE_CH00448 phospholipid N-methyltransferase protein; hypothetical protein 24471..24734 Rhizobium leguminosarum bv. trifolii WSM1325 8022848 YP_002984602.1 CDS Rleg_6599 NC_012858.1 24870 25544 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mlo:mll5373 two-component response regulator; two component transcriptional regulator, winged helix family 24870..25544 Rhizobium leguminosarum bv. trifolii WSM1325 8022849 YP_002984603.1 CDS Rleg_6600 NC_012858.1 25541 26917 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:blr4803 two-component hybrid sensor and regulator; histidine kinase 25541..26917 Rhizobium leguminosarum bv. trifolii WSM1325 8022850 YP_002984604.1 CDS Rleg_6601 NC_012858.1 27116 28096 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 27116..28096 Rhizobium leguminosarum bv. trifolii WSM1325 8022851 YP_002984605.1 CDS Rleg_6602 NC_012858.1 28280 28426 D PFAM: protein of unknown function DUF1127; KEGG: ret:RHE_PE00401 hypothetical protein; SNP /replace=C; SNP /replace=G; SNP /replace=C; hypothetical protein 28280..28426 Rhizobium leguminosarum bv. trifolii WSM1325 8022852 YP_002984606.1 CDS Rleg_6603 NC_012858.1 29055 29891 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 29055..29891 Rhizobium leguminosarum bv. trifolii WSM1325 8022853 YP_002984607.1 CDS Rleg_6604 NC_012858.1 29897 30652 D TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_PA0000318 putative 2-deoxy-D-gluconate 3-dehydrogenase protein; 2-deoxy-D-gluconate 3-dehydrogenase 29897..30652 Rhizobium leguminosarum bv. trifolii WSM1325 8022854 YP_002984608.1 CDS Rleg_6605 NC_012858.1 30866 31606 D PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ret:RHE_PE00398 GntR family transcriptional regulator; SNP /replace=G; GntR family transcriptional regulator 30866..31606 Rhizobium leguminosarum bv. trifolii WSM1325 8022855 YP_002984609.1 CDS Rleg_6606 NC_012858.1 31634 34918 R KEGG: ret:RHE_PE00396 hypothetical protein; hypothetical protein complement(31634..34918) Rhizobium leguminosarum bv. trifolii WSM1325 8022856 YP_002984610.1 CDS Rleg_6607 NC_012858.1 35260 35928 D KEGG: sbn:Sbal195_2140 hypothetical protein; hypothetical protein 35260..35928 Rhizobium leguminosarum bv. trifolii WSM1325 8022857 YP_002984611.1 CDS Rleg_6608 NC_012858.1 36740 37528 D PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: gdi:GDI2107 putative exodeoxyribonuclease; SNP /replace=A; Exonuclease RNase T and DNA polymerase III 36740..37528 Rhizobium leguminosarum bv. trifolii WSM1325 8022858 YP_002984612.1 CDS Rleg_6609 NC_012858.1 37577 37837 D hypothetical protein 37577..37837 Rhizobium leguminosarum bv. trifolii WSM1325 8022859 YP_002984613.1 CDS Rleg_6610 NC_012858.1 38060 38356 D PFAM: PRC-barrel domain protein; KEGG: hypothetical protein; PRC-barrel domain protein 38060..38356 Rhizobium leguminosarum bv. trifolii WSM1325 8022860 YP_002984614.1 CDS Rleg_6611 NC_012858.1 38462 40003 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_PA0000315 putative multidrug resistance transporter protein; SNP /replace=G; drug resistance transporter, EmrB/QacA subfamily complement(38462..40003) Rhizobium leguminosarum bv. trifolii WSM1325 8022861 YP_002984615.1 CDS Rleg_6612 NC_012858.1 40241 41149 R PFAM: flagellin domain protein; KEGG: ret:RHE_PE00392 flagellin C protein; flagellin domain protein complement(40241..41149) Rhizobium leguminosarum bv. trifolii WSM1325 8022862 YP_002984616.1 CDS Rleg_6613 NC_012858.1 41729 43750 D PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: rec:RHECIAT_PA0000313 probable beta-N-acetylhexosaminidase protein; beta-N-acetylhexosaminidase 41729..43750 Rhizobium leguminosarum bv. trifolii WSM1325 8022863 YP_002984617.1 CDS Rleg_6614 NC_012858.1 43836 44312 R PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator; HxlR family transcriptional regulator complement(43836..44312) Rhizobium leguminosarum bv. trifolii WSM1325 8022864 YP_002984618.1 CDS Rleg_6615 NC_012858.1 44403 45218 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: oxidoreductase protein; short chain dehydrogenase 44403..45218 Rhizobium leguminosarum bv. trifolii WSM1325 8022865 YP_002984619.1 CDS Rleg_6616 NC_012858.1 45269 46270 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: zinc-binding oxidoreductase protein; alcohol dehydrogenase zinc-binding domain protein 45269..46270 Rhizobium leguminosarum bv. trifolii WSM1325 8022866 YP_002984620.1 CDS Rleg_6617 NC_012858.1 46376 47239 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_PA0000312 putative transcriptional regulator protein, AraC family; SNP /replace=A; AraC family transcriptional regulator complement(46376..47239) Rhizobium leguminosarum bv. trifolii WSM1325 8022867 YP_002984621.1 CDS Rleg_6618 NC_012858.1 47394 48305 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rec:RHECIAT_PA0000311 hypothetical conserved membrane protein; hypothetical protein 47394..48305 Rhizobium leguminosarum bv. trifolii WSM1325 8022868 YP_002984622.1 CDS Rleg_6619 NC_012858.1 48341 49543 R PFAM: ROK family protein; KEGG: rec:RHECIAT_PA0000310 probable transcriptional regulator protein, ROK/CRP family; ROK family protein complement(48341..49543) Rhizobium leguminosarum bv. trifolii WSM1325 8022869 YP_002984623.1 CDS Rleg_6620 NC_012858.1 49640 50839 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_PA0000309 probable transporter, permease protein; major facilitator superfamily MFS_1 complement(49640..50839) Rhizobium leguminosarum bv. trifolii WSM1325 8022870 YP_002984624.1 CDS Rleg_6621 NC_012858.1 50901 51677 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PE00386 short chain dehydrogenase; short chain dehydrogenase complement(50901..51677) Rhizobium leguminosarum bv. trifolii WSM1325 8022871 YP_002984625.1 CDS Rleg_6622 NC_012858.1 51703 52566 R PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rec:RHECIAT_PA0000307 putative transcriptional regulator protein; RpiR family transcriptional regulator complement(51703..52566) Rhizobium leguminosarum bv. trifolii WSM1325 8022872 YP_002984626.1 CDS Rleg_6623 NC_012858.1 52588 52977 R PFAM: Endoribonuclease L-PSP; KEGG: ret:RHE_PE00384 YigF family translation initiation factor; Endoribonuclease L-PSP complement(52588..52977) Rhizobium leguminosarum bv. trifolii WSM1325 8022873 YP_002984627.1 CDS Rleg_6624 NC_012858.1 53089 53571 D KEGG: rec:RHECIAT_PA0000305 hypothetical protein; hypothetical protein 53089..53571 Rhizobium leguminosarum bv. trifolii WSM1325 8022874 YP_002984628.1 CDS Rleg_6625 NC_012858.1 53602 55077 D PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: ret:RHE_PE00382 hypothetical protein; Microcystin LR degradation protein MlrC-like protein 53602..55077 Rhizobium leguminosarum bv. trifolii WSM1325 8022875 YP_002984629.1 CDS Rleg_6626 NC_012858.1 55078 56178 D PFAM: alanine racemase; KEGG: rec:RHECIAT_PA0000303 putative amino acid processing protein; alanine racemase 55078..56178 Rhizobium leguminosarum bv. trifolii WSM1325 8022876 YP_002984630.1 CDS Rleg_6629 NC_012858.1 56675 58381 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0002791 adenylate cyclase protein; adenylate/guanylate cyclase with TPR repeats 56675..58381 Rhizobium leguminosarum bv. trifolii WSM1325 8022879 YP_002984631.1 CDS Rleg_6630 NC_012858.1 58688 59821 R PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000297 probable sugar uptake ABC transporter, ATP-binding protein; ABC transporter complement(58688..59821) Rhizobium leguminosarum bv. trifolii WSM1325 8022880 YP_002984632.1 CDS Rleg_6631 NC_012858.1 59912 61144 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PE00370 sugar uptake ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 complement(59912..61144) Rhizobium leguminosarum bv. trifolii WSM1325 8022881 YP_002984633.1 CDS Rleg_6632 NC_012858.1 61191 62048 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00369 sugar uptake ABC transporter, permease protein; SNP /replace=G; SNP /replace=C; binding-protein-dependent transport systems inner membrane component complement(61191..62048) Rhizobium leguminosarum bv. trifolii WSM1325 8022882 YP_002984634.1 CDS Rleg_6633 NC_012858.1 62045 62929 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000294 probable sugar uptake ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(62045..62929) Rhizobium leguminosarum bv. trifolii WSM1325 8022883 YP_002984635.1 CDS Rleg_6634 NC_012858.1 62943 64100 R PFAM: oxidoreductase; Oxidoreductase domain; KEGG: ret:RHE_PE00367 oxidoreductase protein; oxidoreductase complement(62943..64100) Rhizobium leguminosarum bv. trifolii WSM1325 8022884 YP_002984636.1 CDS Rleg_6635 NC_012858.1 64433 65320 D PFAM: dienelactone hydrolase; KEGG: rec:RHECIAT_PA0000292 probable dienelactone hydrolase protein; carboxymethylenebutenolidase 64433..65320 Rhizobium leguminosarum bv. trifolii WSM1325 8022885 YP_002984637.1 CDS Rleg_6636 NC_012858.1 65386 66759 R PFAM: MmgE/PrpD family protein; KEGG: oan:Oant_3094 MmgE/PrpD family protein; MmgE/PrpD family protein complement(65386..66759) Rhizobium leguminosarum bv. trifolii WSM1325 8022886 YP_002984638.1 CDS Rleg_6637 NC_012858.1 66868 67773 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_5821 LysR family transcriptional regulator; LysR family transcriptional regulator 66868..67773 Rhizobium leguminosarum bv. trifolii WSM1325 8022887 YP_002984639.1 CDS Rleg_6638 NC_012858.1 67811 68716 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: atc:AGR_L_2884 hypothetical protein; LysR family transcriptional regulator 67811..68716 Rhizobium leguminosarum bv. trifolii WSM1325 8022888 YP_002984640.1 CDS Rleg_6639 NC_012858.1 68895 69839 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_2886 probable peptide ABC transporter permease protein Y4TP; binding-protein-dependent transport systems inner membrane component 68895..69839 Rhizobium leguminosarum bv. trifolii WSM1325 8022889 YP_002984641.1 CDS Rleg_6640 NC_012858.1 69836 70654 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02028 peptide ABC transporter permease; binding-protein-dependent transport systems inner membrane component 69836..70654 Rhizobium leguminosarum bv. trifolii WSM1325 8022890 YP_002984642.1 CDS Rleg_6641 NC_012858.1 70651 72279 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: atc:AGR_L_2889 probable ATP-binding component of ABC transporter; ABC transporter 70651..72279 Rhizobium leguminosarum bv. trifolii WSM1325 8022891 YP_002984643.1 CDS Rleg_6642 NC_012858.1 72281 73144 D KEGG: sme:SMc02026 putative beta-lactamase precursor protein; putative beta-lactamase precursor protein 72281..73144 Rhizobium leguminosarum bv. trifolii WSM1325 8022892 YP_002984644.1 CDS Rleg_6643 NC_012858.1 73169 74713 D PFAM: extracellular solute-binding protein family 5; KEGG: smd:Smed_2436 extracellular solute-binding protein family 5; extracellular solute-binding protein family 5 73169..74713 Rhizobium leguminosarum bv. trifolii WSM1325 8022893 YP_002984645.1 CDS Rleg_6644 NC_012858.1 74844 76292 D TIGRFAM: amidohydrolase; KEGG: sme:SMc02024 hypothetical protein; amidohydrolase 74844..76292 Rhizobium leguminosarum bv. trifolii WSM1325 8022894 YP_002984646.1 CDS Rleg_6645 NC_012858.1 76437 77570 D PFAM: Extracellular ligand-binding receptor; KEGG: mrd:Mrad2831_4419 putative amidase expression-regulating protein; Extracellular ligand-binding receptor 76437..77570 Rhizobium leguminosarum bv. trifolii WSM1325 8022895 YP_002984647.1 CDS Rleg_6646 NC_012858.1 77572 78195 D PFAM: ANTAR domain protein; KEGG: mrd:Mrad2831_4420 response regulator receiver/ANTAR domain-containing protein; ANTAR domain protein with unknown sensor 77572..78195 Rhizobium leguminosarum bv. trifolii WSM1325 8022896 YP_002984648.1 CDS Rleg_6647 NC_012858.1 78372 79229 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mrd:Mrad2831_4421 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 78372..79229 Rhizobium leguminosarum bv. trifolii WSM1325 8022476 YP_002984649.1 CDS Rleg_6648 NC_012858.1 79259 80407 D PFAM: Extracellular ligand-binding receptor; KEGG: mrd:Mrad2831_4422 extracellular ligand-binding receptor; Extracellular ligand-binding receptor 79259..80407 Rhizobium leguminosarum bv. trifolii WSM1325 8022558 YP_002984650.1 CDS Rleg_6649 NC_012858.1 80459 81292 D PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_4423 inner-membrane translocator; inner-membrane translocator 80459..81292 Rhizobium leguminosarum bv. trifolii WSM1325 8022559 YP_002984651.1 CDS Rleg_6650 NC_012858.1 81285 83042 D PFAM: ABC transporter; inner-membrane translocator; SMART: AAA ATPase; KEGG: mrd:Mrad2831_4424 ABC transporter; ABC transporter 81285..83042 Rhizobium leguminosarum bv. trifolii WSM1325 8022560 YP_002984652.1 CDS Rleg_6651 NC_012858.1 83035 83742 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mrd:Mrad2831_4425 ABC transporter; ABC transporter 83035..83742 Rhizobium leguminosarum bv. trifolii WSM1325 8022561 YP_002984653.1 CDS Rleg_6652 NC_012858.1 83780 84916 D PFAM: Amidase; KEGG: reh:H16_A1469 amidase; Amidase 83780..84916 Rhizobium leguminosarum bv. trifolii WSM1325 8022562 YP_002984654.1 CDS Rleg_6653 NC_012858.1 85033 85467 R PFAM: protein of unknown function DUF606; KEGG: ret:RHE_PE00365 hypothetical protein; hypothetical protein complement(85033..85467) Rhizobium leguminosarum bv. trifolii WSM1325 8022563 YP_002984655.1 CDS Rleg_6654 NC_012858.1 85470 85952 R PFAM: protein of unknown function DUF606; KEGG: ret:RHE_PE00364 hypothetical protein; hypothetical protein complement(85470..85952) Rhizobium leguminosarum bv. trifolii WSM1325 8022564 YP_002984656.1 CDS Rleg_6655 NC_012858.1 86167 86658 D PFAM: uracil-DNA glycosylase; KEGG: G:T/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 86167..86658 Rhizobium leguminosarum bv. trifolii WSM1325 8022565 YP_002984657.1 CDS Rleg_6656 NC_012858.1 86711 88471 D PFAM: MOSC domain containing protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: mno:Mnod_6438 MOSC domain containing protein; MOSC domain containing protein 86711..88471 Rhizobium leguminosarum bv. trifolii WSM1325 8022566 YP_002984658.1 CDS Rleg_6657 NC_012858.1 88560 89405 D PFAM: pirin; KEGG: sme:SMa1262 hypothetical protein; pirin 88560..89405 Rhizobium leguminosarum bv. trifolii WSM1325 8022567 YP_002984659.1 CDS Rleg_6658 NC_012858.1 89466 89684 D KEGG: rec:RHECIAT_PA0000289 hypothetical protein; hypothetical protein 89466..89684 Rhizobium leguminosarum bv. trifolii WSM1325 8022568 YP_002984660.1 CDS Rleg_6659 NC_012858.1 89840 90361 R KEGG: ret:RHE_PE00395 hypothetical protein; hypothetical protein complement(89840..90361) Rhizobium leguminosarum bv. trifolii WSM1325 8022569 YP_002984661.1 CDS Rleg_6660 NC_012858.1 90456 90866 R KEGG: atc:AGR_L_1428 hypothetical protein; hypothetical protein complement(90456..90866) Rhizobium leguminosarum bv. trifolii WSM1325 8022570 YP_002984662.1 CDS Rleg_6661 NC_012858.1 90873 91742 R TIGRFAM: hypothetical protein; KEGG: mes:Meso_0637 putative hypothetical protein; hypothetical protein complement(90873..91742) Rhizobium leguminosarum bv. trifolii WSM1325 8022571 YP_002984663.1 CDS Rleg_6662 NC_012858.1 91913 92800 R PFAM: protein of unknown function DUF1206; KEGG: ret:RHE_PF00085 hypothetical protein; hypothetical protein complement(91913..92800) Rhizobium leguminosarum bv. trifolii WSM1325 8022572 YP_002984664.1 CDS Rleg_6663 NC_012858.1 93019 93552 R PFAM: GCN5-related N-acetyltransferase; KEGG: pag:PLES_10311 putative acetyltransferase, GNAT family; GCN5-related N-acetyltransferase complement(93019..93552) Rhizobium leguminosarum bv. trifolii WSM1325 8022573 YP_002984665.1 CDS Rleg_6664 NC_012858.1 93572 94390 R TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; cupin; KEGG: rec:RHECIAT_PA0000276 hypothetical protein; hypothetical protein complement(93572..94390) Rhizobium leguminosarum bv. trifolii WSM1325 8022574 YP_002984666.1 CDS Rleg_6665 NC_012858.1 94594 96429 R PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000275 putative peptide ABC transporter, ATP-binding protein; ABC transporter complement(94594..96429) Rhizobium leguminosarum bv. trifolii WSM1325 8022575 YP_002984667.1 CDS Rleg_6666 NC_012858.1 96462 97658 R PFAM: L-seryl-tRNA selenium transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rec:RHECIAT_PA0000274 L-seryl-tRNA(sec) selenium transferase protein; L-seryl-tRNA selenium transferase complement(96462..97658) Rhizobium leguminosarum bv. trifolii WSM1325 8022576 YP_002984668.1 CDS Rleg_6667 NC_012858.1 97727 98224 R PFAM: Endoribonuclease L-PSP; KEGG: rec:RHECIAT_PA0000273 putative translation initiation inhibitor protein, YjgF family; Endoribonuclease L-PSP complement(97727..98224) Rhizobium leguminosarum bv. trifolii WSM1325 8022577 YP_002984669.1 CDS Rleg_6668 NC_012858.1 98290 99159 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000272 probable peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(98290..99159) Rhizobium leguminosarum bv. trifolii WSM1325 8022578 YP_002984670.1 CDS Rleg_6669 NC_012858.1 99159 100100 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00341 peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(99159..100100) Rhizobium leguminosarum bv. trifolii WSM1325 8022579 YP_002984671.1 CDS Rleg_6670 NC_012858.1 100181 101707 R PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PA0000270 probable peptide ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 complement(100181..101707) Rhizobium leguminosarum bv. trifolii WSM1325 8022580 YP_002984672.1 CDS Rleg_6671 NC_012858.1 101930 102514 D PFAM: protein of unknown function DUF1349; KEGG: rec:RHECIAT_PA0000269 hypothetical protein; hypothetical protein 101930..102514 Rhizobium leguminosarum bv. trifolii WSM1325 8022581 YP_002984673.1 CDS Rleg_6672 NC_012858.1 102738 103871 D KEGG: ABC transporter substrate-binding protein ; K01999 branched-chain amino acid transport system substrate-binding protein; ABC transporter substrate-binding protein 102738..103871 Rhizobium leguminosarum bv. trifolii WSM1325 8022582 YP_002984674.1 CDS Rleg_6673 NC_012858.1 103868 104449 D PFAM: ANTAR domain protein; KEGG: response regulator antiterminator domain-containing protein; ANTAR domain protein with unknown sensor 103868..104449 Rhizobium leguminosarum bv. trifolii WSM1325 8022583 YP_002984675.1 CDS Rleg_6674 NC_012858.1 104449 105297 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3258 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 104449..105297 Rhizobium leguminosarum bv. trifolii WSM1325 8022584 YP_002984676.1 CDS Rleg_6675 NC_012858.1 105297 106217 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component ; K02033 peptide/nickel transport system permease protein; binding-protein-dependent transport systems inner membrane component 105297..106217 Rhizobium leguminosarum bv. trifolii WSM1325 8022585 YP_002984677.1 CDS Rleg_6676 NC_012858.1 106243 107862 D PFAM: extracellular solute-binding protein family 5; KEGG: csa:Csal_0212 extracellular solute-binding protein, family 5; extracellular solute-binding protein family 5 106243..107862 Rhizobium leguminosarum bv. trifolii WSM1325 8022586 YP_002984678.1 CDS Rleg_6677 NC_012858.1 108055 108999 D PFAM: Acetamidase/Formamidase; KEGG: formamidase; Acetamidase/Formamidase 108055..108999 Rhizobium leguminosarum bv. trifolii WSM1325 8022587 YP_002984679.1 CDS Rleg_6678 NC_012858.1 108996 110684 D PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: smd:Smed_1749 ABC transporter; ABC transporter 108996..110684 Rhizobium leguminosarum bv. trifolii WSM1325 8022588 YP_002984680.1 CDS Rleg_6679 NC_012858.1 110975 111778 D KEGG: ret:RHE_PE00337 hydoxyethylthiazole kinase protein; TIGRFAM: hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 110975..111778 Rhizobium leguminosarum bv. trifolii WSM1325 8022589 YP_002984681.1 CDS Rleg_6680 NC_012858.1 111775 112410 D KEGG: ret:RHE_PE00336 thiamine-phosphate pyrophosphorylase protein; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 111775..112410 Rhizobium leguminosarum bv. trifolii WSM1325 8022590 YP_002984682.1 CDS Rleg_6681 NC_012858.1 112407 113216 D TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rec:RHECIAT_PA0000265 phosphomethylpyrimidine kinase protein; phosphomethylpyrimidine kinase 112407..113216 Rhizobium leguminosarum bv. trifolii WSM1325 8022591 YP_002984683.1 CDS Rleg_6682 NC_012858.1 113437 113916 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_PA0000264 hypothetical protein; GCN5-related N-acetyltransferase 113437..113916 Rhizobium leguminosarum bv. trifolii WSM1325 8022592 YP_002984684.1 CDS Rleg_6683 NC_012858.1 113941 114963 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: rec:RHECIAT_PA0000263 putative beta-N-acetylhexosaminidase protein; beta-N-acetylhexosaminidase 113941..114963 Rhizobium leguminosarum bv. trifolii WSM1325 8022593 YP_002984685.1 CDS Rleg_6684 NC_012858.1 115007 116653 D PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PA0000262 putative ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 115007..116653 Rhizobium leguminosarum bv. trifolii WSM1325 8022594 YP_002984686.1 CDS Rleg_6685 NC_012858.1 116710 117687 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00331 putative peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 116710..117687 Rhizobium leguminosarum bv. trifolii WSM1325 8022595 YP_002984687.1 CDS Rleg_6686 NC_012858.1 117689 118567 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000260 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 117689..118567 Rhizobium leguminosarum bv. trifolii WSM1325 8022596 YP_002984688.1 CDS Rleg_6687 NC_012858.1 118564 119367 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_PE00329 putative peptide ABC transporter, ATP-binding protein; ABC transporter 118564..119367 Rhizobium leguminosarum bv. trifolii WSM1325 8022597 YP_002984689.1 CDS Rleg_6688 NC_012858.1 119364 120263 D PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000258 putative ABC transporter, ATP-binding protein; ABC transporter 119364..120263 Rhizobium leguminosarum bv. trifolii WSM1325 8022598 YP_002984690.1 CDS Rleg_6689 NC_012858.1 120335 121015 D KEGG: rec:RHECIAT_PA0000257 hypothetical protein; hypothetical protein 120335..121015 Rhizobium leguminosarum bv. trifolii WSM1325 8022599 YP_002984691.1 CDS Rleg_6690 NC_012858.1 121019 121810 R PFAM: HpcH/HpaI aldolase; KEGG: rec:RHECIAT_PA0000256 probable hydroxyacid aldolase protein; HpcH/HpaI aldolase complement(121019..121810) Rhizobium leguminosarum bv. trifolii WSM1325 8022600 YP_002984692.1 CDS Rleg_6691 NC_012858.1 121910 122113 R KEGG: rec:RHECIAT_PA0000255 hypothetical protein; hypothetical protein complement(121910..122113) Rhizobium leguminosarum bv. trifolii WSM1325 8022601 YP_002984693.1 CDS Rleg_6692 NC_012858.1 122235 123137 R TIGRFAM: choline sulfate-utilization transcription factor; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_PE00325 LysR family transcriptional regulator; LysR family transcriptional regulator complement(122235..123137) Rhizobium leguminosarum bv. trifolii WSM1325 8022602 YP_002984694.1 CDS Rleg_6693 NC_012858.1 123280 124788 D TIGRFAM: choline-sulfatase; PFAM: sulfatase; KEGG: ret:RHE_PE00324 choline sulfatase protein; choline-sulfatase 123280..124788 Rhizobium leguminosarum bv. trifolii WSM1325 8022603 YP_002984695.1 CDS Rleg_6694 NC_012858.1 124927 125787 R PFAM: xylose isomerase; KEGG: ret:RHE_PE00323 hypothetical protein; xylose isomerase complement(124927..125787) Rhizobium leguminosarum bv. trifolii WSM1325 8022604 YP_002984696.1 CDS Rleg_6695 NC_012858.1 125854 127224 R PFAM: Amidase; KEGG: ret:RHE_PE00322 hypothetical protein; hypothetical protein complement(125854..127224) Rhizobium leguminosarum bv. trifolii WSM1325 8022605 YP_002984697.1 CDS Rleg_6696 NC_012858.1 127464 127778 D KEGG: ret:RHE_PE00321 hypothetical protein; hypothetical protein 127464..127778 Rhizobium leguminosarum bv. trifolii WSM1325 8022606 YP_002984698.1 CDS Rleg_6697 NC_012858.1 127851 128291 D PFAM: Protein of unknown function DUF1810; KEGG: rec:RHECIAT_PA0000248 hypothetical protein; hypothetical protein 127851..128291 Rhizobium leguminosarum bv. trifolii WSM1325 8022607 YP_002984699.1 CDS Rleg_6698 NC_012858.1 128340 128528 R KEGG: rec:RHECIAT_PA0000247 hypothetical protein; hypothetical protein complement(128340..128528) Rhizobium leguminosarum bv. trifolii WSM1325 8022608 YP_002984700.1 CDS Rleg_6699 NC_012858.1 128611 129234 R PFAM: regulatory protein TetR; KEGG: ret:RHE_PE00303 TetR family transcriptional regulator; TetR family transcriptional regulator complement(128611..129234) Rhizobium leguminosarum bv. trifolii WSM1325 8022609 YP_002984701.1 CDS Rleg_6700 NC_012858.1 129362 129577 D KEGG: rec:RHECIAT_PA0000245 hypothetical protein; hypothetical protein 129362..129577 Rhizobium leguminosarum bv. trifolii WSM1325 8022610 YP_002984702.1 CDS Rleg_6701 NC_012858.1 129660 130517 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PE00299 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(129660..130517) Rhizobium leguminosarum bv. trifolii WSM1325 8022611 YP_002984703.1 CDS Rleg_6702 NC_012858.1 130782 131615 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ret:RHE_PE00298 IclR family transcriptional regulator; IclR family transcriptional regulator 130782..131615 Rhizobium leguminosarum bv. trifolii WSM1325 8022612 YP_002984704.1 CDS Rleg_6703 NC_012858.1 131638 132846 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(131638..132846) Rhizobium leguminosarum bv. trifolii WSM1325 8022613 YP_002984705.1 CDS Rleg_6704 NC_012858.1 133053 133922 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rec:RHECIAT_PA0000240 probable RNA polymerase sigma factor protein; RNA polymerase, sigma-24 subunit, ECF subfamily complement(133053..133922) Rhizobium leguminosarum bv. trifolii WSM1325 8022614 YP_002984706.1 CDS Rleg_6705 NC_012858.1 134030 134506 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: ret:RHE_PE00293 hypothetical protein; alkylhydroperoxidase like protein, AhpD family 134030..134506 Rhizobium leguminosarum bv. trifolii WSM1325 8022615 YP_002984707.1 CDS Rleg_6706 NC_012858.1 134600 135892 R TIGRFAM: L-rhamnose catabolism isomerase; PFAM: xylose isomerase; KEGG: rec:RHECIAT_PA0000238 putative sugar isomerase protein; L-rhamnose catabolism isomerase complement(134600..135892) Rhizobium leguminosarum bv. trifolii WSM1325 8022616 YP_002984708.1 CDS Rleg_6707 NC_012858.1 135971 136129 D PFAM: protein of unknown function UPF0057; KEGG: atu:Atu0413 stress induced protein; hypothetical protein 135971..136129 Rhizobium leguminosarum bv. trifolii WSM1325 8022617 YP_002984709.1 CDS Rleg_6708 NC_012858.1 136174 138270 R TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; class II aldolase/adducin family protein; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_PA0000237 putative oxidoreductase protein, short-chain dehydrogenases/reductases (SDR) family; short chain dehydrogenase complement(136174..138270) Rhizobium leguminosarum bv. trifolii WSM1325 8022618 YP_002984710.1 CDS Rleg_6709 NC_012858.1 138469 139281 D PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: rec:RHECIAT_PA0000236 probable transcriptional regulator protein, DeoR family; DeoR family transcriptional regulator 138469..139281 Rhizobium leguminosarum bv. trifolii WSM1325 8022619 YP_002984711.1 CDS Rleg_6710 NC_012858.1 139330 140325 D TIGRFAM: rhamnose ABC transporter periplasmic rhamnose-binding protein; KEGG: ret:RHE_PE00289 sugar ABC transporter, substrate-binding protein; rhamnose ABC transporter periplasmic rhamnose-binding protein 139330..140325 Rhizobium leguminosarum bv. trifolii WSM1325 8022620 YP_002984712.1 CDS Rleg_6711 NC_012858.1 140399 141934 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000234 probable sugar ABC transporter, ATP-binding protein; SNP /replace=G; ABC transporter 140399..141934 Rhizobium leguminosarum bv. trifolii WSM1325 8022621 YP_002984713.1 CDS Rleg_6712 NC_012858.1 141994 142995 D PFAM: inner-membrane translocator; KEGG: ret:RHE_PE00287 sugar ABC transporter, permease protein; inner-membrane translocator 141994..142995 Rhizobium leguminosarum bv. trifolii WSM1325 8022622 YP_002984714.1 CDS Rleg_6713 NC_012858.1 142992 143999 D PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PA0000232 putative sugar ABC transporter, permease protein; inner-membrane translocator 142992..143999 Rhizobium leguminosarum bv. trifolii WSM1325 8022623 YP_002984715.1 CDS Rleg_6714 NC_012858.1 143996 144316 D TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: ret:RHE_PE00285 hypothetical protein; L-rhamnose 1-epimerase 143996..144316 Rhizobium leguminosarum bv. trifolii WSM1325 8022624 YP_002984716.1 CDS Rleg_6715 NC_012858.1 144313 145692 D PFAM: carbohydrate kinase FGGY; KEGG: rec:RHECIAT_PA0000230 putative sugar kinase protein; SNP /replace=G; SNP /replace=C; carbohydrate kinase FGGY 144313..145692 Rhizobium leguminosarum bv. trifolii WSM1325 8022625 YP_002984717.1 CDS Rleg_6716 NC_012858.1 145772 146530 D KEGG: ret:RHE_PE00283 hypothetical protein; hypothetical protein 145772..146530 Rhizobium leguminosarum bv. trifolii WSM1325 8022626 YP_002984718.1 CDS Rleg_6717 NC_012858.1 146650 147540 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: smd:Smed_2139 helix-turn-helix-domain containing protein AraC type; AraC family transcriptional regulator 146650..147540 Rhizobium leguminosarum bv. trifolii WSM1325 8022627 YP_002984719.1 CDS Rleg_6718 NC_012858.1 147707 149866 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: sme:SMc01611 putative ferrichrome-iron receptor precursor protein; ferrichrome receptor precursor protein 147707..149866 Rhizobium leguminosarum bv. trifolii WSM1325 8022628 YP_002984720.1 CDS Rleg_6719 NC_012858.1 149960 150739 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_PE00282 ferrichrome-iron transporter, ATP-binding protein; ABC transporter 149960..150739 Rhizobium leguminosarum bv. trifolii WSM1325 8022629 YP_002984721.1 CDS Rleg_6720 NC_012858.1 150743 151618 D PFAM: periplasmic binding protein; KEGG: azc:AZC_1624 ABC Fe+3 hydroxamate (ferrichrome) transporter; periplasmic binding protein 150743..151618 Rhizobium leguminosarum bv. trifolii WSM1325 8022630 YP_002984722.1 CDS Rleg_6721 NC_012858.1 151602 153599 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 151602..153599 Rhizobium leguminosarum bv. trifolii WSM1325 8022631 YP_002984723.1 CDS Rleg_6722 NC_012858.1 153596 154645 D PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: hypothetical protein ; K07229; Siderophore-interacting protein 153596..154645 Rhizobium leguminosarum bv. trifolii WSM1325 8022632 YP_002984724.1 CDS Rleg_6723 NC_012858.1 154653 155534 R TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: ret:RHE_PE00281 putative 3-hydroxyisobutyrate dehydrogenase protein; 3-hydroxyisobutyrate dehydrogenase complement(154653..155534) Rhizobium leguminosarum bv. trifolii WSM1325 8022633 YP_002984725.1 CDS Rleg_6724 NC_012858.1 155544 157139 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: ret:RHE_PE00280 alcohol dehydrogenase; glucose-methanol-choline oxidoreductase complement(155544..157139) Rhizobium leguminosarum bv. trifolii WSM1325 8022634 YP_002984726.1 CDS Rleg_6725 NC_012858.1 157272 158261 R PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PA0000225 probable branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(157272..158261) Rhizobium leguminosarum bv. trifolii WSM1325 8022635 YP_002984727.1 CDS Rleg_6726 NC_012858.1 158263 159150 R PFAM: inner-membrane translocator; KEGG: ret:RHE_PE00278 branched chain amino acid ABC transporter permease; inner-membrane translocator complement(158263..159150) Rhizobium leguminosarum bv. trifolii WSM1325 8022636 YP_002984728.1 CDS Rleg_6727 NC_012858.1 159155 159856 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_PE00277 branched chain amino acid ABC transporter ATP-binding protein; ABC transporter complement(159155..159856) Rhizobium leguminosarum bv. trifolii WSM1325 8022637 YP_002984729.1 CDS Rleg_6728 NC_012858.1 159856 160638 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000222 putative branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter complement(159856..160638) Rhizobium leguminosarum bv. trifolii WSM1325 8022638 YP_002984730.1 CDS Rleg_6729 NC_012858.1 160644 161849 R PFAM: Extracellular ligand-binding receptor; KEGG: rec:RHECIAT_PA0000221 probable branched-chain amino acid ABC transporter, substrate-binding protein; Extracellular ligand-binding receptor complement(160644..161849) Rhizobium leguminosarum bv. trifolii WSM1325 8022659 YP_002984731.1 CDS Rleg_6730 NC_012858.1 162327 162890 R hypothetical protein complement(162327..162890) Rhizobium leguminosarum bv. trifolii WSM1325 8022660 YP_002984732.1 CDS Rleg_6731 NC_012858.1 163290 164474 R PFAM: glycoside hydrolase family 5; KEGG: mno:Mnod_6857 glycoside hydrolase family 5; Mannan endo-1,4-beta-mannosidase complement(163290..164474) Rhizobium leguminosarum bv. trifolii WSM1325 8022661 YP_002984733.1 CDS Rleg_6732 NC_012858.1 164491 165870 R PFAM: polysaccharide biosynthesis protein; KEGG: mno:Mnod_6867 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(164491..165870) Rhizobium leguminosarum bv. trifolii WSM1325 8022662 YP_002984734.1 CDS Rleg_6733 NC_012858.1 165873 166874 R PFAM: glycosyl transferase family 2; KEGG: mno:Mnod_6856 glycosyl transferase family 2; SNP /replace=G; glycosyl transferase family 2 complement(165873..166874) Rhizobium leguminosarum bv. trifolii WSM1325 8022663 YP_002984735.1 CDS Rleg_6734 NC_012858.1 166867 167697 R PFAM: Protein of unknown function DUF1616; KEGG: mno:Mnod_6869 protein of unknown function DUF1616; hypothetical protein complement(166867..167697) Rhizobium leguminosarum bv. trifolii WSM1325 8022664 YP_002984736.1 CDS Rleg_6735 NC_012858.1 167694 168581 R KEGG: oan:Oant_4241 hypothetical protein; hypothetical protein complement(167694..168581) Rhizobium leguminosarum bv. trifolii WSM1325 8022665 YP_002984737.1 CDS Rleg_6736 NC_012858.1 168578 170671 R KEGG: mno:Mnod_6870 putative transmembrane protein; SNP /replace=G; putative transmembrane protein complement(168578..170671) Rhizobium leguminosarum bv. trifolii WSM1325 8022666 YP_002984738.1 CDS Rleg_6737 NC_012858.1 170658 171815 R PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_6871 glycosyl transferase group 1; glycosyl transferase group 1 complement(170658..171815) Rhizobium leguminosarum bv. trifolii WSM1325 8022667 YP_002984739.1 CDS Rleg_6738 NC_012858.1 171844 172617 R PFAM: glycosyl transferase family 2; KEGG: mno:Mnod_6872 glycosyl transferase family 2; glycosyl transferase family 2 complement(171844..172617) Rhizobium leguminosarum bv. trifolii WSM1325 8022668 YP_002984740.1 CDS Rleg_6739 NC_012858.1 172734 173846 R PFAM: polysaccharide export protein; KEGG: mno:Mnod_6863 polysaccharide export protein; SNP /replace=G; polysaccharide export protein complement(172734..173846) Rhizobium leguminosarum bv. trifolii WSM1325 8022669 YP_002984741.1 CDS Rleg_6740 NC_012858.1 174551 175504 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PE00273 LysR family transcriptional regulator; LysR family transcriptional regulator 174551..175504 Rhizobium leguminosarum bv. trifolii WSM1325 8022670 YP_002984742.1 CDS Rleg_6741 NC_012858.1 175505 175843 R PFAM: cupin; KEGG: rec:RHECIAT_PA0000218 putative pectin degradation protein; cupin complement(175505..175843) Rhizobium leguminosarum bv. trifolii WSM1325 8022671 YP_002984743.1 CDS Rleg_6742 NC_012858.1 176007 177194 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rec:RHECIAT_PA0000217 glutaryl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain protein 176007..177194 Rhizobium leguminosarum bv. trifolii WSM1325 8022672 YP_002984744.1 CDS Rleg_6743 NC_012858.1 177385 177846 D KEGG: ret:RHE_PE00271 hypothetical protein; hypothetical protein 177385..177846 Rhizobium leguminosarum bv. trifolii WSM1325 8022673 YP_002984745.1 CDS Rleg_6744 NC_012858.1 177843 179204 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 177843..179204 Rhizobium leguminosarum bv. trifolii WSM1325 8022674 YP_002984746.1 CDS Rleg_6745 NC_012858.1 179248 179817 D PFAM: hypothetical protein; KEGG: rec:RHECIAT_PA0000214 hypothetical conserved membrane protein; hypothetical protein 179248..179817 Rhizobium leguminosarum bv. trifolii WSM1325 8022675 YP_002984747.1 CDS Rleg_6746 NC_012858.1 179946 180989 R PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_PA0000213 probable xylitol dehydrogenase protein; alcohol dehydrogenase GroES domain protein complement(179946..180989) Rhizobium leguminosarum bv. trifolii WSM1325 8022676 YP_002984748.1 CDS Rleg_6747 NC_012858.1 181639 183342 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 181639..183342 Rhizobium leguminosarum bv. trifolii WSM1325 8022677 YP_002984749.1 CDS Rleg_6748 NC_012858.1 183352 183507 D hypothetical protein 183352..183507 Rhizobium leguminosarum bv. trifolii WSM1325 8022678 YP_002984750.1 CDS Rleg_6749 NC_012858.1 183552 185612 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 183552..185612 Rhizobium leguminosarum bv. trifolii WSM1325 8022679 YP_002984751.1 CDS Rleg_6750 NC_012858.1 185646 186215 D KEGG: rec:RHECIAT_PA0000209 potassium-transporting ATPase protein, C chain; TIGRFAM: potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 185646..186215 Rhizobium leguminosarum bv. trifolii WSM1325 8022680 YP_002984752.1 CDS Rleg_6751 NC_012858.1 186328 189036 D PFAM: Osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rec:RHECIAT_PA0000208 two-component sensor histidine kinase protein (probably regulates osmosensitive potassium channel); Osmosensitive K channel His kinase sensor 186328..189036 Rhizobium leguminosarum bv. trifolii WSM1325 8022681 YP_002984753.1 CDS Rleg_6752 NC_012858.1 189033 189725 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ret:RHE_PE00262 two-component response regulator; two component transcriptional regulator, winged helix family 189033..189725 Rhizobium leguminosarum bv. trifolii WSM1325 8022682 YP_002984754.1 CDS Rleg_6753 NC_012858.1 189722 190282 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rec:RHECIAT_PA0000206 putative PTS system, regulator protein; putative PTS IIA-like nitrogen-regulatory protein PtsN 189722..190282 Rhizobium leguminosarum bv. trifolii WSM1325 8022683 YP_002984755.1 CDS Rleg_6754 NC_012858.1 190397 191413 R PFAM: porin; KEGG: rec:RHECIAT_PA0000205 porin outer membrane protein; porin complement(190397..191413) Rhizobium leguminosarum bv. trifolii WSM1325 8022684 YP_002984756.1 CDS Rleg_6755 NC_012858.1 191774 192799 D TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PE00259 sulfate uptake ABC transporter, substrate-binding protein; sulfate ABC transporter periplasmic sulfate-binding protein 191774..192799 Rhizobium leguminosarum bv. trifolii WSM1325 8022685 YP_002984757.1 CDS Rleg_6756 NC_012858.1 192808 193665 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000203 putative sulfate uptake ABC transporter, permease protein; sulfate ABC transporter, inner membrane subunit CysT 192808..193665 Rhizobium leguminosarum bv. trifolii WSM1325 8022686 YP_002984758.1 CDS Rleg_6757 NC_012858.1 193655 194527 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00257 sulfate uptake ABC transporter, permease protein; sulfate ABC transporter, inner membrane subunit CysW 193655..194527 Rhizobium leguminosarum bv. trifolii WSM1325 8022687 YP_002984759.1 CDS Rleg_6758 NC_012858.1 194538 195578 D KEGG: rec:RHECIAT_PA0000201 probable sulfate uptake ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter; SMART: AAA ATPase; sulfate ABC transporter ATPase 194538..195578 Rhizobium leguminosarum bv. trifolii WSM1325 8022688 YP_002984760.1 CDS Rleg_6759 NC_012858.1 195800 196636 D PFAM: cell wall hydrolase SleB; KEGG: ret:RHE_PE00255 putative cell wall-associated hydrolase protein; cell wall hydrolase SleB 195800..196636 Rhizobium leguminosarum bv. trifolii WSM1325 8022689 YP_002984761.1 CDS Rleg_6760 NC_012858.1 196692 197924 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(196692..197924) Rhizobium leguminosarum bv. trifolii WSM1325 8022690 YP_002984762.1 CDS Rleg_6761 NC_012858.1 198029 198781 R PFAM: metallophosphoesterase; KEGG: esa:ESA_pESA3p05456 hypothetical protein; metallophosphoesterase complement(198029..198781) Rhizobium leguminosarum bv. trifolii WSM1325 8022691 YP_002984763.1 CDS Rleg_6762 NC_012858.1 198852 199910 R PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00248 sugar ABC transporter, ATP-binding protein; ABC transporter complement(198852..199910) Rhizobium leguminosarum bv. trifolii WSM1325 8022692 YP_002984764.1 CDS Rleg_6763 NC_012858.1 199915 200745 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00247 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(199915..200745) Rhizobium leguminosarum bv. trifolii WSM1325 8022693 YP_002984765.1 CDS Rleg_6764 NC_012858.1 200750 201730 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000191 probable sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(200750..201730) Rhizobium leguminosarum bv. trifolii WSM1325 8022694 YP_002984766.1 CDS Rleg_6765 NC_012858.1 201781 203040 R PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_PA0000190 putative sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein family 1 complement(201781..203040) Rhizobium leguminosarum bv. trifolii WSM1325 8022695 YP_002984767.1 CDS Rleg_6766 NC_012858.1 203076 204248 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ret:RHE_PE00244 hypothetical protein; hypothetical protein complement(203076..204248) Rhizobium leguminosarum bv. trifolii WSM1325 8022696 YP_002984768.1 CDS Rleg_6767 NC_012858.1 204245 204967 R PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_PA0000188 probable transcriptional regulator protein, GntR family; GntR family transcriptional regulator complement(204245..204967) Rhizobium leguminosarum bv. trifolii WSM1325 8022697 YP_002984769.1 CDS Rleg_6768 NC_012858.1 205189 205467 D hypothetical protein 205189..205467 Rhizobium leguminosarum bv. trifolii WSM1325 8022698 YP_002984770.1 CDS Rleg_6769 NC_012858.1 205844 207469 D PFAM: carboxylesterase type B; KEGG: asu:Asuc_2093 carboxylesterase type B; carboxylesterase type B 205844..207469 Rhizobium leguminosarum bv. trifolii WSM1325 8022699 YP_002984771.1 CDS Rleg_6770 NC_012858.1 207547 208377 R PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: rpb:RPB_0526 short chain dehydrogenase; SNP /replace=T; SNP /replace=A; SNP /replace=G; SNP /replace=C; SNP /replace=C; short chain dehydrogenase complement(207547..208377) Rhizobium leguminosarum bv. trifolii WSM1325 8022700 YP_002984772.1 CDS Rleg_6771 NC_012858.1 208488 209393 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mll2472 transcriptional regulator; LysR family transcriptional regulator 208488..209393 Rhizobium leguminosarum bv. trifolii WSM1325 8022701 YP_002984773.1 CDS Rleg_6772 NC_012858.1 209401 210291 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mlr0919 transcriptional regulator; LysR family transcriptional regulator complement(209401..210291) Rhizobium leguminosarum bv. trifolii WSM1325 8022702 YP_002984774.1 CDS Rleg_6773 NC_012858.1 210502 211317 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rec:RHECIAT_PA0000174 putative endonuclease/exonuclease/phosphatase protein; Endonuclease/exonuclease/phosphatase complement(210502..211317) Rhizobium leguminosarum bv. trifolii WSM1325 8022703 YP_002984775.1 CDS Rleg_6774 NC_012858.1 211411 212874 R PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: rec:RHECIAT_PA0000173 transmembrane cardiolipin synthetase protein; phospholipase D/Transphosphatidylase complement(211411..212874) Rhizobium leguminosarum bv. trifolii WSM1325 8022704 YP_002984776.1 CDS Rleg_6775 NC_012858.1 213036 213677 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase; KEGG: ret:RHE_PE00232 DNA-directed DNA polymerase protein; phage SPO1 DNA polymerase-related protein 213036..213677 Rhizobium leguminosarum bv. trifolii WSM1325 8022705 YP_002984777.1 CDS Rleg_6776 NC_012858.1 213820 214074 D KEGG: rec:RHECIAT_PA0000171 hypothetical protein; hypothetical protein 213820..214074 Rhizobium leguminosarum bv. trifolii WSM1325 8022706 YP_002984778.1 CDS Rleg_6777 NC_012858.1 214391 214564 D KEGG: rec:RHECIAT_PA0000169 hypothetical protein; hypothetical protein 214391..214564 Rhizobium leguminosarum bv. trifolii WSM1325 8022707 YP_002984779.1 CDS Rleg_6778 NC_012858.1 214737 217454 D PFAM: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; KEGG: rec:RHECIAT_PA0000168 putative two-component sensor histidine kinase/response regulator hybrid protein; multi-sensor hybrid histidine kinase 214737..217454 Rhizobium leguminosarum bv. trifolii WSM1325 8022708 YP_002984780.1 CDS Rleg_6779 NC_012858.1 217484 217690 R KEGG: rec:RHECIAT_PA0000167 hypothetical protein; hypothetical protein complement(217484..217690) Rhizobium leguminosarum bv. trifolii WSM1325 8022709 YP_002984781.1 CDS Rleg_6780 NC_012858.1 217994 218308 D KEGG: rec:RHECIAT_PA0000166 hypothetical protein; hypothetical protein 217994..218308 Rhizobium leguminosarum bv. trifolii WSM1325 8022710 YP_002984782.1 CDS Rleg_6781 NC_012858.1 218362 218652 D KEGG: rec:RHECIAT_PA0000165 hypothetical protein; hypothetical protein 218362..218652 Rhizobium leguminosarum bv. trifolii WSM1325 8022711 YP_002984783.1 CDS Rleg_6782 NC_012858.1 218659 219384 D PFAM: Glutathione S-transferase domain; KEGG: ret:RHE_PE00210 glutathione S-transferase protein; glutathione S-transferase 218659..219384 Rhizobium leguminosarum bv. trifolii WSM1325 8022712 YP_002984784.1 CDS Rleg_6783 NC_012858.1 219518 220396 R TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: rec:RHECIAT_PA0000163 putative DNA ligase protein; DNA polymerase LigD, polymerase domain protein complement(219518..220396) Rhizobium leguminosarum bv. trifolii WSM1325 8022713 YP_002984785.1 CDS Rleg_6784 NC_012858.1 220393 221400 R KEGG: rec:RHECIAT_PA0000162 probable DNA topoisomerase I protein; putative DNA topoisomerase I protein complement(220393..221400) Rhizobium leguminosarum bv. trifolii WSM1325 8022714 YP_002984786.1 CDS Rleg_6785 NC_012858.1 221416 223572 R KEGG: rec:RHECIAT_PA0000161 glycosyl hydrolase (glycogen debranching) protein; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching enzyme GlgX complement(221416..223572) Rhizobium leguminosarum bv. trifolii WSM1325 8022715 YP_002984787.1 CDS Rleg_6786 NC_012858.1 223676 224470 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_PA0000160 probable dehydrogenase/reductase protein; short-chain dehydrogenase/reductase SDR complement(223676..224470) Rhizobium leguminosarum bv. trifolii WSM1325 8022716 YP_002984788.1 CDS Rleg_6787 NC_012858.1 224586 225176 R KEGG: rsp:RSP_4068 hypothetical protein; hypothetical protein complement(224586..225176) Rhizobium leguminosarum bv. trifolii WSM1325 8022717 YP_002984789.1 CDS Rleg_6788 NC_012858.1 225173 225613 R KEGG: mlo:mlr3301 hypothetical protein; hypothetical protein complement(225173..225613) Rhizobium leguminosarum bv. trifolii WSM1325 8022718 YP_002984790.1 CDS Rleg_6789 NC_012858.1 225600 230264 R PFAM: peptidase C14 caspase catalytic subunit p20; Peptidoglycan-binding domain 1 protein; KEGG: scl:sce0912 hypothetical protein; peptidase C14 caspase catalytic subunit p20 complement(225600..230264) Rhizobium leguminosarum bv. trifolii WSM1325 8022719 YP_002984791.1 CDS Rleg_6790 NC_012858.1 230675 231889 R PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_PE00206 hypothetical protein; major facilitator superfamily MFS_1 complement(230675..231889) Rhizobium leguminosarum bv. trifolii WSM1325 8022720 YP_002984792.1 CDS Rleg_6791 NC_012858.1 232065 233558 R PFAM: sulfatase; KEGG: pla:Plav_3137 sulfatase; SNP /replace=G; SNP /replace=C; SNP /replace=C; SNP /replace=T; SNP /replace=T; SNP /replace=G; SNP /replace=T; SNP /replace=G; SNP /replace=T; SNP /replace=G; SNP /replace=C; sulfatase complement(232065..233558) Rhizobium leguminosarum bv. trifolii WSM1325 8022721 YP_002984793.1 CDS Rleg_6792 NC_012858.1 233597 234454 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1246 hypothetical protein; binding-protein-dependent transport systems inner membrane component complement(233597..234454) Rhizobium leguminosarum bv. trifolii WSM1325 8022722 YP_002984794.1 CDS Rleg_6793 NC_012858.1 234451 235413 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_2891 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(234451..235413) Rhizobium leguminosarum bv. trifolii WSM1325 8022723 YP_002984795.1 CDS Rleg_6794 NC_012858.1 235416 236708 R PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar-binding protein; extracellular solute-binding protein family 1 complement(235416..236708) Rhizobium leguminosarum bv. trifolii WSM1325 8022724 YP_002984796.1 CDS Rleg_6795 NC_012858.1 236954 237862 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmj:BMULJ_03283 LysR family transcriptional regulator; LysR family transcriptional regulator 236954..237862 Rhizobium leguminosarum bv. trifolii WSM1325 8022725 YP_002984797.1 CDS Rleg_6796 NC_012858.1 237863 238345 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_PE00205 putative acetyltransferase protein; SNP /replace=G; GCN5-related N-acetyltransferase complement(237863..238345) Rhizobium leguminosarum bv. trifolii WSM1325 8022726 YP_002984798.1 CDS Rleg_6797 NC_012858.1 238422 239627 R catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase complement(238422..239627) Rhizobium leguminosarum bv. trifolii WSM1325 8022727 YP_002984799.1 CDS Rleg_6798 NC_012858.1 239637 240341 R KEGG: rec:RHECIAT_PA0000155 3-oxoadipate CoA-transferase protein, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase, B subunit complement(239637..240341) Rhizobium leguminosarum bv. trifolii WSM1325 8022728 YP_002984800.1 CDS Rleg_6799 NC_012858.1 240338 241045 R KEGG: rec:RHECIAT_PA0000154 3-oxoadipate CoA-transferase protein, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase, A subunit complement(240338..241045) Rhizobium leguminosarum bv. trifolii WSM1325 8022729 YP_002984801.1 CDS Rleg_6800 NC_012858.1 241203 241961 D KEGG: ret:RHE_PE00200 IclR family transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 241203..241961 Rhizobium leguminosarum bv. trifolii WSM1325 8022730 YP_002984802.1 CDS Rleg_6802 NC_012858.1 242244 243167 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rec:RHECIAT_PA0000152 probable transcriptional regulator protein, ArsR family; ArsR family transcriptional regulator 242244..243167 Rhizobium leguminosarum bv. trifolii WSM1325 8022732 YP_002984803.1 CDS Rleg_6803 NC_012858.1 243378 244886 D PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: ret:RHE_PE00195 alpha-L-arabinofuranosidase protein; SNP /replace=A; SNP /replace=C; Alpha-N-arabinofuranosidase 243378..244886 Rhizobium leguminosarum bv. trifolii WSM1325 8022733 YP_002984804.1 CDS Rleg_6804 NC_012858.1 245090 246994 D PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_PE00194 oligopeptide ABC transporter, ATP-binding protein; extracellular solute-binding protein family 5 245090..246994 Rhizobium leguminosarum bv. trifolii WSM1325 8022734 YP_002984805.1 CDS Rleg_6805 NC_012858.1 247108 248112 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000149 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 247108..248112 Rhizobium leguminosarum bv. trifolii WSM1325 8022735 YP_002984806.1 CDS Rleg_6806 NC_012858.1 248116 248973 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000148 probable oligopeptide ABC transporter, permease protein; SNP /replace=C; binding-protein-dependent transport systems inner membrane component 248116..248973 Rhizobium leguminosarum bv. trifolii WSM1325 8022736 YP_002984807.1 CDS Rleg_6807 NC_012858.1 248975 249964 D KEGG: rec:RHECIAT_PA0000147 probable oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SNP /replace=T; oligopeptide/dipeptide ABC transporter, ATPase subunit 248975..249964 Rhizobium leguminosarum bv. trifolii WSM1325 8022737 YP_002984808.1 CDS Rleg_6808 NC_012858.1 249961 250773 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000146 probable ABC transporter, ATP-binding protein; ABC transporter 249961..250773 Rhizobium leguminosarum bv. trifolii WSM1325 8022738 YP_002984809.1 CDS Rleg_6809 NC_012858.1 250880 253123 D KEGG: ret:RHE_CH02148 putative sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CHASE domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with Chase sensor 250880..253123 Rhizobium leguminosarum bv. trifolii WSM1325 8022739 YP_002984810.1 CDS Rleg_6810 NC_012858.1 253207 256503 R TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: traA; Ti-type conjugative transfer relaxase TraA; Ti-type conjugative transfer relaxase TraA complement(253207..256503) Rhizobium leguminosarum bv. trifolii WSM1325 8022740 YP_002984811.1 CDS Rleg_6811 NC_012858.1 256783 257094 D KEGG: mobilization protein C; mobilization protein C 256783..257094 Rhizobium leguminosarum bv. trifolii WSM1325 8022823 YP_002984812.1 CDS Rleg_6812 NC_012858.1 257094 257672 D KEGG: traG; Ti-type conjugative transfer system protein TraG ; K03205 type IV secretion system protein VirD4; hypothetical protein 257094..257672 Rhizobium leguminosarum bv. trifolii WSM1325 8022395 YP_002984813.1 CDS Rleg_6813 NC_012858.1 257694 258950 R TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: smd:Smed_5805 HipA domain protein; HipA N-terminal domain protein complement(257694..258950) Rhizobium leguminosarum bv. trifolii WSM1325 8022396 YP_002984814.1 CDS Rleg_6814 NC_012858.1 258943 259251 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pde:Pden_1547 XRE family transcriptional regulator; XRE family transcriptional regulator complement(258943..259251) Rhizobium leguminosarum bv. trifolii WSM1325 8022397 YP_002984815.1 CDS Rleg_6815 NC_012858.1 259681 259926 D PFAM: WGR domain protein; SMART: WGR domain protein; KEGG: hypothetical protein; WGR domain protein 259681..259926 Rhizobium leguminosarum bv. trifolii WSM1325 8022398 YP_002984816.1 CDS Rleg_6816 NC_012858.1 259989 260909 R PFAM: domain of unknown function DUF1738; KEGG: rec:RHECIAT_PB0000154 probable DNA conjugal transfer antirestriction protein; hypothetical protein complement(259989..260909) Rhizobium leguminosarum bv. trifolii WSM1325 8022399 YP_002984817.1 CDS Rleg_6817 NC_012858.1 261267 262196 R KEGG: rec:RHECIAT_PA0000115 putative sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(261267..262196) Rhizobium leguminosarum bv. trifolii WSM1325 8022400 YP_002984818.1 CDS Rleg_6818 NC_012858.1 262370 262804 D KEGG: ret:RHE_PC00121 hypothetical protein; hypothetical protein 262370..262804 Rhizobium leguminosarum bv. trifolii WSM1325 8022401 YP_002984819.1 CDS Rleg_6819 NC_012858.1 263259 263564 D KEGG: hypothetical protein; hypothetical protein 263259..263564 Rhizobium leguminosarum bv. trifolii WSM1325 8022402 YP_002984820.1 CDS Rleg_6820 NC_012858.1 263838 264518 D PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: rde:RD1_A0063 succinoglycan biosynthesis protein ExoI; nuclease (SNase domain protein) 263838..264518 Rhizobium leguminosarum bv. trifolii WSM1325 8022403 YP_002984821.1 CDS Rleg_6821 NC_012858.1 264519 265493 R PFAM: OmpA/MotB domain protein; KEGG: hypothetical protein; OmpA/MotB domain protein complement(264519..265493) Rhizobium leguminosarum bv. trifolii WSM1325 8022404 YP_002984822.1 CDS Rleg_6822 NC_012858.1 265478 266683 R KEGG: hypothetical protein; hypothetical protein complement(265478..266683) Rhizobium leguminosarum bv. trifolii WSM1325 8022405 YP_002984823.1 CDS Rleg_6823 NC_012858.1 266683 267501 R KEGG: hypothetical protein; hypothetical protein complement(266683..267501) Rhizobium leguminosarum bv. trifolii WSM1325 8022406 YP_002984824.1 CDS Rleg_6824 NC_012858.1 267479 268927 R KEGG: hypothetical protein; hypothetical protein complement(267479..268927) Rhizobium leguminosarum bv. trifolii WSM1325 8022407 YP_002984825.1 CDS Rleg_6825 NC_012858.1 269707 270408 R PFAM: ThiJ/PfpI domain protein; KEGG: sus:Acid_1477 ThiJ/PfpI domain-containing protein; ThiJ/PfpI domain protein complement(269707..270408) Rhizobium leguminosarum bv. trifolii WSM1325 8022408 YP_002984826.1 CDS Rleg_6826 NC_012858.1 270557 270946 R PFAM: 4-oxalocrotonate tautomerase; KEGG: mno:Mnod_8518 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(270557..270946) Rhizobium leguminosarum bv. trifolii WSM1325 8022409 YP_002984827.1 CDS Rleg_6827 NC_012858.1 271258 271494 R PFAM: 4-oxalocrotonate tautomerase; KEGG: smd:Smed_3914 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(271258..271494) Rhizobium leguminosarum bv. trifolii WSM1325 8022410 YP_002984828.1 CDS Rleg_6828 NC_012858.1 271531 272163 R KEGG: bpy:Bphyt_1688 conserved hypothetical protein, thioredoxin-like fold; conserved hypothetical protein, thioredoxin-like fold protein complement(271531..272163) Rhizobium leguminosarum bv. trifolii WSM1325 8022411 YP_002984829.1 CDS Rleg_6829 NC_012858.1 272234 272947 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SM_b20210 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(272234..272947) Rhizobium leguminosarum bv. trifolii WSM1325 8022412 YP_002984830.1 CDS Rleg_6830 NC_012858.1 273122 273664 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr6270 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(273122..273664) Rhizobium leguminosarum bv. trifolii WSM1325 8022413 YP_002984831.1 CDS Rleg_6831 NC_012858.1 274431 276722 D KEGG: atc:AGR_L_213 hypothetical protein; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 274431..276722 Rhizobium leguminosarum bv. trifolii WSM1325 8022414 YP_002984832.1 CDS Rleg_6832 NC_012858.1 276764 276988 R hypothetical protein complement(276764..276988) Rhizobium leguminosarum bv. trifolii WSM1325 8022415 YP_002984833.1 CDS Rleg_6833 NC_012858.1 277012 277236 R hypothetical protein complement(277012..277236) Rhizobium leguminosarum bv. trifolii WSM1325 8022416 YP_002984834.1 CDS Rleg_6834 NC_012858.1 277427 280192 R PFAM: transcriptional regulator domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00532 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(277427..280192) Rhizobium leguminosarum bv. trifolii WSM1325 8022417 YP_002984835.1 CDS Rleg_6835 NC_012858.1 280518 281186 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: ret:RHE_PF00533 two-component response regulator protein; LuxR family transcriptional regulator 280518..281186 Rhizobium leguminosarum bv. trifolii WSM1325 8022418 YP_002984836.1 CDS Rleg_6836 NC_012858.1 281335 282372 D PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PF00536 epoxide hydrolase protein; alpha/beta hydrolase fold protein 281335..282372 Rhizobium leguminosarum bv. trifolii WSM1325 8022419 YP_002984837.1 CDS Rleg_6837 NC_012858.1 282537 283574 D PFAM: Luciferase-like monooxygenase; KEGG: rec:RHECIAT_CH0000674 probable luciferase protein; SNP /replace=A; Luciferase-like monooxygenase 282537..283574 Rhizobium leguminosarum bv. trifolii WSM1325 8022420 YP_002984838.1 CDS Rleg_6838 NC_012858.1 283623 284084 R KEGG: ret:RHE_PF00537 hypothetical protein; hypothetical protein complement(283623..284084) Rhizobium leguminosarum bv. trifolii WSM1325 8022421 YP_002984839.1 CDS Rleg_6839 NC_012858.1 284287 285513 R PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: smd:Smed_5539 protein of unknown function DUF1228; hypothetical protein complement(284287..285513) Rhizobium leguminosarum bv. trifolii WSM1325 8022422 YP_002984840.1 CDS Rleg_6840 NC_012858.1 285660 286745 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: ret:RHE_PF00539 dioxygenase protein; 2-nitropropane dioxygenase NPD complement(285660..286745) Rhizobium leguminosarum bv. trifolii WSM1325 8022423 YP_002984841.1 CDS Rleg_6841 NC_012858.1 287034 287759 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: smd:Smed_5537 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 287034..287759 Rhizobium leguminosarum bv. trifolii WSM1325 8022424 YP_002984842.1 CDS Rleg_6842 NC_012858.1 287753 288259 D PFAM: Endoribonuclease L-PSP; KEGG: smd:Smed_5536 endoribonuclease L-PSP; Endoribonuclease L-PSP 287753..288259 Rhizobium leguminosarum bv. trifolii WSM1325 8022425 YP_002984843.1 CDS Rleg_6843 NC_012858.1 288256 289245 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ret:RHE_PF00542 enoyl-CoA hydratase protein; Enoyl-CoA hydratase/isomerase 288256..289245 Rhizobium leguminosarum bv. trifolii WSM1325 8022426 YP_002984844.1 CDS Rleg_6844 NC_012858.1 289331 289879 D KEGG: ret:RHE_PF00543 hypothetical protein; hypothetical protein 289331..289879 Rhizobium leguminosarum bv. trifolii WSM1325 8022427 YP_002984845.1 CDS Rleg_6845 NC_012858.1 289896 290531 D PFAM: isochorismatase hydrolase; KEGG: ret:RHE_PF00544 isochorismatase protein; isochorismatase hydrolase 289896..290531 Rhizobium leguminosarum bv. trifolii WSM1325 8022428 YP_002984846.1 CDS Rleg_6846 NC_012858.1 290740 292287 D PFAM: Aldehyde Dehydrogenase; KEGG: smd:Smed_5547 aldehyde dehydrogenase; Aldehyde Dehydrogenase 290740..292287 Rhizobium leguminosarum bv. trifolii WSM1325 8022429 YP_002984847.1 CDS Rleg_6847 NC_012858.1 292342 292935 R PFAM: NADPH-dependent FMN reductase; KEGG: smd:Smed_5533 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(292342..292935) Rhizobium leguminosarum bv. trifolii WSM1325 8022430 YP_002984848.1 CDS Rleg_6848 NC_012858.1 292987 294015 R catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase complement(292987..294015) Rhizobium leguminosarum bv. trifolii WSM1325 8022431 YP_002984849.1 CDS Rleg_6849 NC_012858.1 294051 294860 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: smd:Smed_5531 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(294051..294860) Rhizobium leguminosarum bv. trifolii WSM1325 8022432 YP_002984850.1 CDS Rleg_6850 NC_012858.1 294899 296185 R PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: smd:Smed_5530 epoxide hydrolase domain protein; Microsomal epoxide hydrolase complement(294899..296185) Rhizobium leguminosarum bv. trifolii WSM1325 8022433 YP_002984851.1 CDS Rleg_6851 NC_012858.1 296400 297068 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_PF00545 hypothetical protein; SNP /replace=G; glyoxalase/bleomycin resistance protein/dioxygenase 296400..297068 Rhizobium leguminosarum bv. trifolii WSM1325 8022434 YP_002984852.1 CDS Rleg_6852 NC_012858.1 297305 298237 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_5526 LysR family transcriptional regulator; LysR family transcriptional regulator complement(297305..298237) Rhizobium leguminosarum bv. trifolii WSM1325 8022435 YP_002984853.1 CDS Rleg_6853 NC_012858.1 298486 299157 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: smd:Smed_5540 response regulator receiver protein; LuxR family transcriptional regulator 298486..299157 Rhizobium leguminosarum bv. trifolii WSM1325 8022436 YP_002984854.1 CDS Rleg_6854 NC_012858.1 299298 301958 D KEGG: smd:Smed_5522 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; SNP /replace=C; SNP /replace=G; SNP /replace=C; SNP /replace=T; PAS/PAC sensor signal transduction histidine kinase 299298..301958 Rhizobium leguminosarum bv. trifolii WSM1325 8022437 YP_002984855.1 CDS Rleg_6855 NC_012858.1 301955 302329 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: smd:Smed_5521 response regulator receiver protein; response regulator receiver protein 301955..302329 Rhizobium leguminosarum bv. trifolii WSM1325 8022438 YP_002984856.1 CDS Rleg_6856 NC_012858.1 302468 305470 D KEGG: smd:Smed_5522 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 302468..305470 Rhizobium leguminosarum bv. trifolii WSM1325 8022439 YP_002984857.1 CDS Rleg_6857 NC_012858.1 305656 306951 D PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: smd:Smed_5519 epoxide hydrolase domain protein; Epoxide hydrolase domain protein 305656..306951 Rhizobium leguminosarum bv. trifolii WSM1325 8022440 YP_002984858.1 CDS Rleg_6858 NC_012858.1 307721 309601 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; BA14K family protein; KEGG: rec:RHECIAT_CH0001201 penicillin binding protein B; penicillin-binding protein, 1A family complement(307721..309601) Rhizobium leguminosarum bv. trifolii WSM1325 8022441 YP_002984859.1 CDS Rleg_6859 NC_012858.1 310346 312334 D PFAM: protein of unknown function UPF0118; KEGG: smd:Smed_5154 protein of unknown function UPF0118; hypothetical protein 310346..312334 Rhizobium leguminosarum bv. trifolii WSM1325 8022442 YP_002984860.1 CDS Rleg_6863 NC_012858.1 314372 314812 D PFAM: protein of unknown function DUF421; KEGG: mes:Meso_3510 conserved hypothetical membrane-anchored protein; hypothetical protein 314372..314812 Rhizobium leguminosarum bv. trifolii WSM1325 8022446 YP_002984861.1 CDS Rleg_6864 NC_012858.1 315601 316176 R KEGG: smd:Smed_3722 hypothetical protein; hypothetical protein complement(315601..316176) Rhizobium leguminosarum bv. trifolii WSM1325 8022447 YP_002984862.1 CDS Rleg_6865 NC_012858.1 316328 316777 R KEGG: rsq:Rsph17025_4126 hypothetical protein; hypothetical protein complement(316328..316777) Rhizobium leguminosarum bv. trifolii WSM1325 8022448 YP_002984863.1 CDS Rleg_6866 NC_012858.1 317228 317755 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ret:RHE_PF00052 RNA polymerase sigma-E factor; RNA polymerase, sigma-24 subunit, ECF subfamily 317228..317755 Rhizobium leguminosarum bv. trifolii WSM1325 8022449 YP_002984864.1 CDS Rleg_6867 NC_012858.1 318117 319118 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SM_b20076 short chain dehydrogenase; short chain dehydrogenase 318117..319118 Rhizobium leguminosarum bv. trifolii WSM1325 8022450 YP_002984865.1 CDS Rleg_6868 NC_012858.1 319152 319871 D KEGG: mex:Mext_4153 hypothetical protein; hypothetical protein 319152..319871 Rhizobium leguminosarum bv. trifolii WSM1325 8022451 YP_002984866.1 CDS Rleg_6870 NC_012858.1 320505 322406 D PFAM: K potassium transporter; KEGG: mlo:mll1417 potassium uptake protein Kup; K potassium transporter 320505..322406 Rhizobium leguminosarum bv. trifolii WSM1325 8022453 YP_002984867.1 CDS Rleg_6871 NC_012858.1 323099 323596 D KEGG: atc:AGR_L_3014 hypothetical protein; hypothetical protein 323099..323596 Rhizobium leguminosarum bv. trifolii WSM1325 8022454 YP_002984868.1 CDS Rleg_6872 NC_012858.1 323707 323928 R KEGG: rec:RHECIAT_CH0000185 hypothetical protein; hypothetical protein complement(323707..323928) Rhizobium leguminosarum bv. trifolii WSM1325 8022455 YP_002984869.1 CDS Rleg_6873 NC_012858.1 324184 325554 R PFAM: glycoside hydrolase family 4; KEGG: rec:RHECIAT_PA0000101 alpha-galactosidase protein; glycoside hydrolase family 4 complement(324184..325554) Rhizobium leguminosarum bv. trifolii WSM1325 8022456 YP_002984870.1 CDS Rleg_6874 NC_012858.1 325577 327244 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_PE00093 peptide ABC transporter, ATP-binding protein; ABC transporter complement(325577..327244) Rhizobium leguminosarum bv. trifolii WSM1325 8022457 YP_002984871.1 CDS Rleg_6875 NC_012858.1 327255 328388 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000099 probable peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(327255..328388) Rhizobium leguminosarum bv. trifolii WSM1325 8022458 YP_002984872.1 CDS Rleg_6876 NC_012858.1 328390 329397 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000098 probable peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(328390..329397) Rhizobium leguminosarum bv. trifolii WSM1325 8022459 YP_002984873.1 CDS Rleg_6877 NC_012858.1 329516 331603 R PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PA0000097 alpha-galactoside ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 complement(329516..331603) Rhizobium leguminosarum bv. trifolii WSM1325 8022460 YP_002984874.1 CDS Rleg_6878 NC_012858.1 331728 333194 R PFAM: glycoside hydrolase family 4; KEGG: rec:RHECIAT_PA0000096 alpha-galactosidase protein; glycoside hydrolase family 4 complement(331728..333194) Rhizobium leguminosarum bv. trifolii WSM1325 8022461 YP_002984875.1 CDS Rleg_6879 NC_012858.1 333405 334280 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_PA0000095 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator 333405..334280 Rhizobium leguminosarum bv. trifolii WSM1325 8022462 YP_002984876.1 CDS Rleg_6880 NC_012858.1 334310 335371 R PFAM: Methyltransferase type 12; Methyltransferase type 11; O-methyltransferase family 2; KEGG: methyltransferase protein; Methyltransferase type 12 complement(334310..335371) Rhizobium leguminosarum bv. trifolii WSM1325 8022463 YP_002984877.1 CDS Rleg_6881 NC_012858.1 335959 336279 D KEGG: ret:RHE_PE00087 hypothetical protein; XRE family transcriptional regulator 335959..336279 Rhizobium leguminosarum bv. trifolii WSM1325 8022464 YP_002984878.1 CDS Rleg_6882 NC_012858.1 336283 336543 D KEGG: rec:RHECIAT_PA0000093 hypothetical protein; hypothetical protein 336283..336543 Rhizobium leguminosarum bv. trifolii WSM1325 8022465 YP_002984879.1 CDS Rleg_6883 NC_012858.1 336554 336793 D KEGG: rec:RHECIAT_PA0000092 hypothetical protein; hypothetical protein 336554..336793 Rhizobium leguminosarum bv. trifolii WSM1325 8022466 YP_002984880.1 CDS Rleg_6885 NC_012858.1 337165 339726 D PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); KEGG: ret:RHE_PE00084 putative sarcosine dehydrogenase protein; FAD dependent oxidoreductase 337165..339726 Rhizobium leguminosarum bv. trifolii WSM1325 8022468 YP_002984881.1 CDS Rleg_6886 NC_012858.1 339938 340078 R KEGG: atc:AGR_C_1484 hypothetical protein; putative transcriptional regulator, CopG/Arc/MetJ family complement(339938..340078) Rhizobium leguminosarum bv. trifolii WSM1325 8022469 YP_002984882.1 CDS Rleg_6887 NC_012858.1 340150 340482 R KEGG: ret:RHE_CH02020 hypothetical protein; hypothetical protein complement(340150..340482) Rhizobium leguminosarum bv. trifolii WSM1325 8022470 YP_002984883.1 CDS Rleg_6888 NC_012858.1 340844 342364 D PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: mechanosensitive ion channel protein; cyclic nucleotide-regulated small mechanosensitive ion channel 340844..342364 Rhizobium leguminosarum bv. trifolii WSM1325 8022471 YP_002984884.1 CDS Rleg_6889 NC_012858.1 342716 343093 D KEGG: rru:Rru_A1975 XRE family transcriptional regulator; XRE family transcriptional regulator 342716..343093 Rhizobium leguminosarum bv. trifolii WSM1325 8022472 YP_002984885.1 CDS Rleg_6890 NC_012858.1 343692 343916 R KEGG: mlo:msl4971 hypothetical protein; hypothetical protein complement(343692..343916) Rhizobium leguminosarum bv. trifolii WSM1325 8022473 YP_002984886.1 CDS Rleg_6891 NC_012858.1 343913 344665 R KEGG: mntH; manganese transporter protein; mntH; manganese transporter protein complement(343913..344665) Rhizobium leguminosarum bv. trifolii WSM1325 8022474 YP_002984887.1 CDS Rleg_6892 NC_012858.1 344723 345478 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ret:RHE_PE00083 hypothetical protein; phosphoesterase PA-phosphatase related complement(344723..345478) Rhizobium leguminosarum bv. trifolii WSM1325 8022475 YP_002984888.1 CDS Rleg_6893 NC_012858.1 345684 346001 R hypothetical protein complement(345684..346001) Rhizobium leguminosarum bv. trifolii WSM1325 8022639 YP_002984889.1 CDS Rleg_6894 NC_012858.1 346026 346751 D KEGG: rec:RHECIAT_PC0000054 hypothetical protein; putative transcriptional regulator, Crp/Fnr family 346026..346751 Rhizobium leguminosarum bv. trifolii WSM1325 8022640 YP_002984890.1 CDS Rleg_6895 NC_012858.1 346754 346993 R KEGG: rec:RHECIAT_PC0000053 hypothetical protein; hypothetical protein complement(346754..346993) Rhizobium leguminosarum bv. trifolii WSM1325 8022641 YP_002984891.1 CDS Rleg_6896 NC_012858.1 347214 347462 D KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein 347214..347462 Rhizobium leguminosarum bv. trifolii WSM1325 8022642 YP_002984892.1 CDS Rleg_6897 NC_012858.1 347528 347782 D KEGG: rec:RHECIAT_CH0002698 hypothetical protein; hypothetical protein 347528..347782 Rhizobium leguminosarum bv. trifolii WSM1325 8022643 YP_002984893.1 CDS Rleg_6898 NC_012858.1 347957 348862 R PFAM: protein of unknown function DUF323; KEGG: mlo:mll5466 hypothetical protein; hypothetical protein complement(347957..348862) Rhizobium leguminosarum bv. trifolii WSM1325 8022644 YP_002984894.1 CDS Rleg_6899 NC_012858.1 349029 349553 R KEGG: sme:SMa0945 hypothetical protein; hypothetical protein complement(349029..349553) Rhizobium leguminosarum bv. trifolii WSM1325 8022645 YP_002984895.1 CDS Rleg_6900 NC_012858.1 349610 351247 R PFAM: sulfatase; KEGG: sme:SMa0943 arylsulfatase; sulfatase complement(349610..351247) Rhizobium leguminosarum bv. trifolii WSM1325 8022646 YP_002984896.1 CDS Rleg_6901 NC_012858.1 351611 351982 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: smd:Smed_5632 response regulator receiver protein; response regulator receiver protein complement(351611..351982) Rhizobium leguminosarum bv. trifolii WSM1325 8022647 YP_002984897.1 CDS Rleg_6902 NC_012858.1 352084 352716 R PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sme:SMa1686 two-component response regulator; LuxR family transcriptional regulator complement(352084..352716) Rhizobium leguminosarum bv. trifolii WSM1325 8022648 YP_002984898.1 CDS Rleg_6903 NC_012858.1 352713 354608 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMa1684 sensory histidine kinase; histidine kinase complement(352713..354608) Rhizobium leguminosarum bv. trifolii WSM1325 8022649 YP_002984899.1 CDS Rleg_6904 NC_012858.1 354900 356570 D PFAM: sulfatase; KEGG: smd:Smed_5768 sulfatase; sulfatase 354900..356570 Rhizobium leguminosarum bv. trifolii WSM1325 8022650 YP_002984900.1 CDS Rleg_6905 NC_012858.1 356655 357665 D PFAM: haloacid dehalogenase; KEGG: smd:Smed_1238 NapD-like protein; haloacid dehalogenase 356655..357665 Rhizobium leguminosarum bv. trifolii WSM1325 8022651 YP_002984901.1 CDS Rleg_6906 NC_012858.1 357736 360012 D KEGG: smd:Smed_5770 tetratricopeptide TPR_2 repeat protein; TIGRFAM: cytochrome C family protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; cytochrome C family protein 357736..360012 Rhizobium leguminosarum bv. trifolii WSM1325 8022652 YP_002984902.1 CDS Rleg_6907 NC_012858.1 360103 360891 D KEGG: rec:RHECIAT_CH0002048 hypothetical protein; hypothetical protein 360103..360891 Rhizobium leguminosarum bv. trifolii WSM1325 8022653 YP_002984903.1 CDS Rleg_6908 NC_012858.1 361128 361931 D KEGG: smd:Smed_5626 hypothetical protein; hypothetical protein 361128..361931 Rhizobium leguminosarum bv. trifolii WSM1325 8022654 YP_002984904.1 CDS Rleg_6909 NC_012858.1 362483 363895 D PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: bja:blr2659 hypothetical protein; hypothetical protein 362483..363895 Rhizobium leguminosarum bv. trifolii WSM1325 8022655 YP_002984905.1 CDS Rleg_6910 NC_012858.1 364094 364636 D KEGG: ret:RHE_PE00082 hypothetical protein; hypothetical protein 364094..364636 Rhizobium leguminosarum bv. trifolii WSM1325 8022656 YP_002984906.1 CDS Rleg_6911 NC_012858.1 364644 366131 R PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rec:RHECIAT_PA0000088 histidine ammonia-lyase protein; phenylalanine/histidine ammonia-lyase complement(364644..366131) Rhizobium leguminosarum bv. trifolii WSM1325 8022657 YP_002984907.1 CDS Rleg_6912 NC_012858.1 366128 366904 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_PE00080 octopine ABC transporter, ATP-binding protein; ABC transporter complement(366128..366904) Rhizobium leguminosarum bv. trifolii WSM1325 8022658 YP_002984908.1 CDS Rleg_6913 NC_012858.1 366930 367634 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00079 octopine ABC transporter, permease protein; polar amino acid ABC transporter, inner membrane subunit complement(366930..367634) Rhizobium leguminosarum bv. trifolii WSM1325 8022897 YP_002984909.1 CDS Rleg_6914 NC_012858.1 367645 368370 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000085 octopine ABC transporter, permease protein; polar amino acid ABC transporter, inner membrane subunit complement(367645..368370) Rhizobium leguminosarum bv. trifolii WSM1325 8022942 YP_002984910.1 CDS Rleg_6915 NC_012858.1 368588 369430 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rec:RHECIAT_PA0000084 probable octopine ABC transporter, substrate-binding protein; extracellular solute-binding protein family 3 complement(368588..369430) Rhizobium leguminosarum bv. trifolii WSM1325 8022943 YP_002984911.1 CDS Rleg_6916 NC_012858.1 369628 370383 D KEGG: ret:RHE_PE00076 histidine utilization transcriptional regulator (repressor) protein; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; transcriptional regulator, histidine utilization repressor, GntR family 369628..370383 Rhizobium leguminosarum bv. trifolii WSM1325 8022944 YP_002984912.1 CDS Rleg_6917 NC_012858.1 370509 370745 D KEGG: atc:AGR_pAT_694 hypothetical protein; hypothetical protein 370509..370745 Rhizobium leguminosarum bv. trifolii WSM1325 8022945 YP_002984913.1 CDS Rleg_6918 NC_012858.1 370855 371622 D KEGG: rec:RHECIAT_CH0003417 hypothetical protein; putative transcriptional regulator, Crp/Fnr family 370855..371622 Rhizobium leguminosarum bv. trifolii WSM1325 8022946 YP_002984914.1 CDS Rleg_6919 NC_012858.1 371700 371861 R hypothetical protein complement(371700..371861) Rhizobium leguminosarum bv. trifolii WSM1325 8022947 YP_002984915.1 CDS Rleg_6920 NC_012858.1 371943 372662 R KEGG: rec:RHECIAT_PA0000081 putative transcriptional regulator protein, GntR family; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; transcriptional regulator, histidine utilization repressor, GntR family complement(371943..372662) Rhizobium leguminosarum bv. trifolii WSM1325 8022948 YP_002984916.1 CDS Rleg_6921 NC_012858.1 372781 374127 R catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase complement(372781..374127) Rhizobium leguminosarum bv. trifolii WSM1325 8022949 YP_002984917.1 CDS Rleg_6922 NC_012858.1 374250 375512 D catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 374250..375512 Rhizobium leguminosarum bv. trifolii WSM1325 8022950 YP_002984918.1 CDS Rleg_6923 NC_012858.1 375509 377044 D catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 375509..377044 Rhizobium leguminosarum bv. trifolii WSM1325 8022951 YP_002984919.1 CDS Rleg_6924 NC_012858.1 377046 377867 D TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; KEGG: ret:RHE_PE00071 formiminoglutamase protein; N-formylglutamate amidohydrolase 377046..377867 Rhizobium leguminosarum bv. trifolii WSM1325 8022952 YP_002984920.1 CDS Rleg_6925 NC_012858.1 377892 379565 D catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 377892..379565 Rhizobium leguminosarum bv. trifolii WSM1325 8022953 YP_002984921.1 CDS Rleg_6926 NC_012858.1 379571 380146 D PFAM: protein of unknown function DUF886; KEGG: rec:RHECIAT_PA0000075 hypothetical protein; hypothetical protein 379571..380146 Rhizobium leguminosarum bv. trifolii WSM1325 8022954 YP_002984922.1 CDS Rleg_6927 NC_012858.1 380322 380951 D PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: rec:RHECIAT_PA0000074 putative molecular chaperone, DnaJ family; heat shock protein DnaJ domain protein 380322..380951 Rhizobium leguminosarum bv. trifolii WSM1325 8022955 YP_002984923.1 CDS Rleg_6928 NC_012858.1 380977 381678 R PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: ret:RHE_PE00067 hypothetical protein; hypothetical protein complement(380977..381678) Rhizobium leguminosarum bv. trifolii WSM1325 8022956 YP_002984924.1 CDS Rleg_6929 NC_012858.1 382156 382719 R hypothetical protein complement(382156..382719) Rhizobium leguminosarum bv. trifolii WSM1325 8022957 YP_002984925.1 CDS Rleg_6931 NC_012858.1 383471 384349 R PFAM: protein of unknown function DUF1236; KEGG: rec:RHECIAT_CH0001818 hypothetical protein; hypothetical protein complement(383471..384349) Rhizobium leguminosarum bv. trifolii WSM1325 8022959 YP_002984926.1 CDS Rleg_6932 NC_012858.1 384449 384844 R PFAM: protein of unknown function DUF1236; KEGG: rec:RHECIAT_CH0001817 hypothetical protein; SNP /replace=G; SNP /replace=C; hypothetical protein complement(384449..384844) Rhizobium leguminosarum bv. trifolii WSM1325 8022960 YP_002984927.1 CDS Rleg_6933 NC_012858.1 385283 386749 R KEGG: atc:AGR_pAT_788 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; SNP /replace=C; signal transduction histidine kinase complement(385283..386749) Rhizobium leguminosarum bv. trifolii WSM1325 8022961 YP_002984928.1 CDS Rleg_6934 NC_012858.1 386950 388077 D KEGG: sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase 386950..388077 Rhizobium leguminosarum bv. trifolii WSM1325 8022962 YP_002984929.1 CDS Rleg_6935 NC_012858.1 388074 388499 D LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; response regulator 388074..388499 Rhizobium leguminosarum bv. trifolii WSM1325 8022963 YP_002984930.1 CDS Rleg_6936 NC_012858.1 388551 389285 R KEGG: hypothetical protein ; K08482 circadian clock protein KaiC; hypothetical protein complement(388551..389285) Rhizobium leguminosarum bv. trifolii WSM1325 8022964 YP_002984931.1 CDS Rleg_6937 NC_012858.1 389650 390051 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: two-component response regulator protein; SNP /replace=C; response regulator receiver protein 389650..390051 Rhizobium leguminosarum bv. trifolii WSM1325 8022965 YP_002984932.1 CDS Rleg_6938 NC_012858.1 390170 390373 D KEGG: rec:RHECIAT_CH0002095 hypothetical protein; hypothetical protein 390170..390373 Rhizobium leguminosarum bv. trifolii WSM1325 8022966 YP_002984933.1 CDS Rleg_6939 NC_012858.1 390454 390768 D KEGG: ret:RHE_PF00494 hypothetical protein; hypothetical protein 390454..390768 Rhizobium leguminosarum bv. trifolii WSM1325 8022967 YP_002984934.1 CDS Rleg_6940 NC_012858.1 390765 391019 D KEGG: ret:RHE_PF00493 hypothetical protein; hypothetical protein 390765..391019 Rhizobium leguminosarum bv. trifolii WSM1325 8022968 YP_002984935.1 CDS Rleg_6941 NC_012858.1 391293 391556 R PFAM: protein of unknown function DUF982; KEGG: rec:RHECIAT_CH0000995 hypothetical protein; hypothetical protein complement(391293..391556) Rhizobium leguminosarum bv. trifolii WSM1325 8022969 YP_002984936.1 CDS Rleg_6942 NC_012858.1 392162 392374 D KEGG: GF17570 gene product from transcript GF17570-RA; hypothetical protein 392162..392374 Rhizobium leguminosarum bv. trifolii WSM1325 8022970 YP_002984937.1 CDS Rleg_6943 NC_012858.1 393322 393534 D KEGG: rec:RHECIAT_PC0000299 hypothetical protein; hypothetical protein 393322..393534 Rhizobium leguminosarum bv. trifolii WSM1325 8022971 YP_002984938.1 CDS Rleg_6944 NC_012858.1 393543 393785 D KEGG: mlo:msr1747 hypothetical protein; hypothetical protein 393543..393785 Rhizobium leguminosarum bv. trifolii WSM1325 8022972 YP_002984939.1 CDS Rleg_6946 NC_012858.1 394810 394986 R KEGG: rec:RHECIAT_CH0003322 hypothetical protein; hypothetical protein complement(394810..394986) Rhizobium leguminosarum bv. trifolii WSM1325 8022974 YP_002984940.1 CDS Rleg_6947 NC_012858.1 395280 396002 R KEGG: smd:Smed_5629 hypothetical protein; hypothetical protein complement(395280..396002) Rhizobium leguminosarum bv. trifolii WSM1325 8022975 YP_002984941.1 CDS Rleg_6948 NC_012858.1 396023 396709 R KEGG: azc:AZC_3686 hypothetical protein; hypothetical protein complement(396023..396709) Rhizobium leguminosarum bv. trifolii WSM1325 8022976 YP_002984942.1 CDS Rleg_6949 NC_012858.1 396728 397297 R PFAM: OmpA/MotB domain protein; KEGG: hypothetical protein; OmpA/MotB domain protein complement(396728..397297) Rhizobium leguminosarum bv. trifolii WSM1325 8022977 YP_002984943.1 CDS Rleg_6950 NC_012858.1 397322 397918 R KEGG: cysteine rich repeat protein; hypothetical protein complement(397322..397918) Rhizobium leguminosarum bv. trifolii WSM1325 8022978 YP_002984944.1 CDS Rleg_6951 NC_012858.1 397893 398162 R hypothetical protein complement(397893..398162) Rhizobium leguminosarum bv. trifolii WSM1325 8022979 YP_002984945.1 CDS Rleg_6954 NC_012858.1 400254 400592 R KEGG: atc:AGR_C_1859 hypothetical protein; hypothetical protein complement(400254..400592) Rhizobium leguminosarum bv. trifolii WSM1325 8022982 YP_002984946.1 CDS Rleg_6955 NC_012858.1 400782 401048 D KEGG: smd:Smed_4883 hypothetical protein; hypothetical protein 400782..401048 Rhizobium leguminosarum bv. trifolii WSM1325 8022983 YP_002984947.1 CDS Rleg_6956 NC_012858.1 401100 402116 D KEGG: rde:RD1_A0006 hypothetical protein; hypothetical protein 401100..402116 Rhizobium leguminosarum bv. trifolii WSM1325 8022984 YP_002984948.1 CDS Rleg_6957 NC_012858.1 402217 403494 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: sme:SMa0599 hypothetical protein; hypothetical protein 402217..403494 Rhizobium leguminosarum bv. trifolii WSM1325 8022985 YP_002984949.1 CDS Rleg_6958 NC_012858.1 403724 405526 D KEGG: smd:Smed_4881 hypothetical protein; hypothetical protein 403724..405526 Rhizobium leguminosarum bv. trifolii WSM1325 8022986 YP_002984950.1 CDS Rleg_6959 NC_012858.1 405638 406015 D KEGG: smd:Smed_5626 hypothetical protein; hypothetical protein 405638..406015 Rhizobium leguminosarum bv. trifolii WSM1325 8022987 YP_002984951.1 CDS Rleg_6960 NC_012858.1 406046 407488 D PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: smd:Smed_4882 protein of unknown function DUF1214; hypothetical protein 406046..407488 Rhizobium leguminosarum bv. trifolii WSM1325 8022988 YP_002984952.1 CDS Rleg_6962 NC_012858.1 407990 408691 R PFAM: protein of unknown function DUF81; KEGG: rec:RHECIAT_PC0000140 hypothetical conserved membrane protein; hypothetical protein complement(407990..408691) Rhizobium leguminosarum bv. trifolii WSM1325 8022990 YP_002984953.1 CDS Rleg_6963 NC_012858.1 408889 409203 R KEGG: hypothetical protein; hypothetical protein complement(408889..409203) Rhizobium leguminosarum bv. trifolii WSM1325 8022991 YP_002984954.1 CDS Rleg_6964 NC_012858.1 409558 409812 R KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein complement(409558..409812) Rhizobium leguminosarum bv. trifolii WSM1325 8022992 YP_002984955.1 CDS Rleg_6965 NC_012858.1 409889 410782 D KEGG: Ku protein ; K10979 DNA end-binding protein Ku; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 409889..410782 Rhizobium leguminosarum bv. trifolii WSM1325 8022993 YP_002984956.1 CDS Rleg_6966 NC_012858.1 410792 411619 D KEGG: Ku protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 410792..411619 Rhizobium leguminosarum bv. trifolii WSM1325 8022994 YP_002984957.1 CDS Rleg_6967 NC_012858.1 411648 412244 D PFAM: protein of unknown function DUF159; KEGG: msl:Msil_3101 protein of unknown function DUF159; hypothetical protein 411648..412244 Rhizobium leguminosarum bv. trifolii WSM1325 8022995 YP_002984958.1 CDS Rleg_6969 NC_012858.1 412785 413054 R hypothetical protein complement(412785..413054) Rhizobium leguminosarum bv. trifolii WSM1325 8022997 YP_002984959.1 CDS Rleg_6970 NC_012858.1 413407 413655 D hypothetical protein 413407..413655 Rhizobium leguminosarum bv. trifolii WSM1325 8022998 YP_002984960.1 CDS Rleg_6972 NC_012858.1 414481 414807 D hypothetical protein 414481..414807 Rhizobium leguminosarum bv. trifolii WSM1325 8023000 YP_002984961.1 CDS Rleg_6974 NC_012858.1 416388 416597 D KEGG: rec:RHECIAT_CH0002698 hypothetical protein; hypothetical protein 416388..416597 Rhizobium leguminosarum bv. trifolii WSM1325 8023002 YP_002984962.1 CDS Rleg_6975 NC_012858.1 417053 417298 D PFAM: protein of unknown function DUF497; KEGG: btr:Btr_0515 hypothetical protein; hypothetical protein 417053..417298 Rhizobium leguminosarum bv. trifolii WSM1325 8023003 YP_002984963.1 CDS Rleg_6976 NC_012858.1 417295 417609 D KEGG: oan:Oant_0615 hypothetical protein; hypothetical protein 417295..417609 Rhizobium leguminosarum bv. trifolii WSM1325 8023004 YP_002984964.1 CDS Rleg_6977 NC_012858.1 418407 418793 R PFAM: protein of unknown function DUF983; KEGG: mes:Meso_2074 protein of unknown function DUF983; hypothetical protein complement(418407..418793) Rhizobium leguminosarum bv. trifolii WSM1325 8023005 YP_002984965.1 CDS Rleg_6978 NC_012858.1 419315 420289 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: azc:AZC_3800 putative cobalamin synthesis protein; cobalamin synthesis protein P47K 419315..420289 Rhizobium leguminosarum bv. trifolii WSM1325 8023006 YP_002984966.1 CDS Rleg_6979 NC_012858.1 420323 420820 D KEGG: azc:AZC_3799 hypothetical protein; hypothetical protein 420323..420820 Rhizobium leguminosarum bv. trifolii WSM1325 8023007 YP_002984967.1 CDS Rleg_6980 NC_012858.1 420850 421590 D PFAM: nitrile hydratase beta subunit; KEGG: azc:AZC_3798 putative nitrile hydratase beta subunit; nitrile hydratase beta subunit 420850..421590 Rhizobium leguminosarum bv. trifolii WSM1325 8023008 YP_002984968.1 CDS Rleg_6981 NC_012858.1 421618 422235 D KEGG: azc:AZC_3797 nitrile hydratase alpha subunit; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; nitrile hydratase, alpha subunit 421618..422235 Rhizobium leguminosarum bv. trifolii WSM1325 8023009 YP_002984969.1 CDS Rleg_6982 NC_012858.1 422246 422572 D KEGG: azc:AZC_3796 putative transmembrane nitrile hydratase; putative transmembrane nitrile hydratase 422246..422572 Rhizobium leguminosarum bv. trifolii WSM1325 8023010 YP_002984970.1 CDS Rleg_6983 NC_012858.1 422629 422817 D TIGRFAM: cobalt transporter, subunit CbtB; KEGG: atc:AGR_C_1611 hypothetical protein; cobalt transporter, subunit CbtB 422629..422817 Rhizobium leguminosarum bv. trifolii WSM1325 8023011 YP_002984971.1 CDS Rleg_6984 NC_012858.1 422829 423554 D TIGRFAM: cobalt transporter, subunit CbtA; KEGG: atc:AGR_C_1613 hypothetical protein; cobalt transporter, subunit CbtA 422829..423554 Rhizobium leguminosarum bv. trifolii WSM1325 8023012 YP_002984972.1 CDS Rleg_6985 NC_012858.1 423551 423871 D KEGG: atc:AGR_C_1615 hypothetical protein; hypothetical protein 423551..423871 Rhizobium leguminosarum bv. trifolii WSM1325 8023013 YP_002984973.1 CDS Rleg_6986 NC_012858.1 423874 424944 D PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: azc:AZC_3794 AraC-like protein; AraC family transcriptional regulator 423874..424944 Rhizobium leguminosarum bv. trifolii WSM1325 8023014 YP_002984974.1 CDS Rleg_6989 NC_012858.1 425320 426384 R TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: rec:RHECIAT_CH0001158 probable ATP-dependent DNA ligase protein; DNA polymerase LigD, ligase domain protein complement(425320..426384) Rhizobium leguminosarum bv. trifolii WSM1325 8023017 YP_002984975.1 CDS Rleg_6990 NC_012858.1 426494 426781 D KEGG: rec:RHECIAT_CH0002676 hypothetical protein; hypothetical protein 426494..426781 Rhizobium leguminosarum bv. trifolii WSM1325 8023018 YP_002984976.1 CDS Rleg_6991 NC_012858.1 427018 427266 R KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein complement(427018..427266) Rhizobium leguminosarum bv. trifolii WSM1325 8023019 YP_002984977.1 CDS Rleg_6993 NC_012858.1 427755 427961 R KEGG: ret:RHE_CH02629 hypothetical protein; hypothetical protein complement(427755..427961) Rhizobium leguminosarum bv. trifolii WSM1325 8023021 YP_002984978.1 CDS Rleg_6994 NC_012858.1 427963 428163 R KEGG: ret:RHE_CH02630 hypothetical protein; hypothetical protein complement(427963..428163) Rhizobium leguminosarum bv. trifolii WSM1325 8023022 YP_002984979.1 CDS Rleg_6995 NC_012858.1 428522 428845 R KEGG: rec:RHECIAT_CH0001156 hypothetical protein; hypothetical protein complement(428522..428845) Rhizobium leguminosarum bv. trifolii WSM1325 8022741 YP_002984980.1 CDS Rleg_6996 NC_012858.1 428838 429158 R KEGG: ret:RHE_PF00494 hypothetical protein; hypothetical protein complement(428838..429158) Rhizobium leguminosarum bv. trifolii WSM1325 8022742 YP_002984981.1 CDS Rleg_6997 NC_012858.1 429571 429753 D KEGG: bra:BRADO0858 hypothetical protein; SNP /replace=T; hypothetical protein 429571..429753 Rhizobium leguminosarum bv. trifolii WSM1325 8022743 YP_002984982.1 CDS Rleg_6998 NC_012858.1 429962 430549 D PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bbt:BBta_3692 PAS/PAC sensor hybrid histidine kinase; SNP /replace=C; SNP /replace=C; SNP /replace=T; PAS fold-4 domain protein 429962..430549 Rhizobium leguminosarum bv. trifolii WSM1325 8022744 YP_002984983.1 CDS Rleg_6999 NC_012858.1 430566 430805 R KEGG: ret:RHE_CH02913 hypothetical protein; hypothetical protein complement(430566..430805) Rhizobium leguminosarum bv. trifolii WSM1325 8022745 YP_002984984.1 CDS Rleg_7001 NC_012858.1 431286 431672 R PFAM: transposase IS4 family protein; KEGG: cak:Caul_4244 transposase IS4 family protein; transposase IS4 family protein complement(431286..431672) Rhizobium leguminosarum bv. trifolii WSM1325 8022747 YP_002984985.1 CDS Rleg_7003 NC_012858.1 432485 432754 R hypothetical protein complement(432485..432754) Rhizobium leguminosarum bv. trifolii WSM1325 8022749 YP_002984986.1 CDS Rleg_7004 NC_012858.1 432892 433359 R PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH03200 glycosyltransferase; SNP /replace=G; glycosyl transferase family 2 complement(432892..433359) Rhizobium leguminosarum bv. trifolii WSM1325 8022750 YP_002984987.1 CDS Rleg_7005 NC_012858.1 433833 434210 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: atu:Atu4671 response regulator; response regulator receiver protein 433833..434210 Rhizobium leguminosarum bv. trifolii WSM1325 8022751 YP_002984988.1 CDS Rleg_7006 NC_012858.1 434634 435956 R PFAM: HipA domain protein; KEGG: smd:Smed_4463 HipA domain protein; HipA domain protein complement(434634..435956) Rhizobium leguminosarum bv. trifolii WSM1325 8022752 YP_002984989.1 CDS Rleg_7007 NC_012858.1 435946 436278 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: smd:Smed_4462 XRE family transcriptional regulator; XRE family transcriptional regulator complement(435946..436278) Rhizobium leguminosarum bv. trifolii WSM1325 8022753 YP_002984990.1 CDS Rleg_7008 NC_012858.1 436529 436819 D KEGG: ret:RHE_CH01054 hypothetical protein; hypothetical protein 436529..436819 Rhizobium leguminosarum bv. trifolii WSM1325 8022754 YP_002984991.1 CDS Rleg_7009 NC_012858.1 437036 437536 D KEGG: ret:RHE_CH01053 hypothetical protein; hypothetical protein 437036..437536 Rhizobium leguminosarum bv. trifolii WSM1325 8022755 YP_002984992.1 CDS Rleg_7010 NC_012858.1 437587 438639 R TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: rec:RHECIAT_CH0001158 probable ATP-dependent DNA ligase protein; DNA polymerase LigD, ligase domain protein complement(437587..438639) Rhizobium leguminosarum bv. trifolii WSM1325 8022756 YP_002984993.1 CDS Rleg_7012 NC_012858.1 439084 440049 R PFAM: fatty acid hydroxylase; KEGG: ret:RHE_PF00492 hypothetical protein; fatty acid hydroxylase complement(439084..440049) Rhizobium leguminosarum bv. trifolii WSM1325 8022758 YP_002984994.1 CDS Rleg_7013 NC_012858.1 440297 440503 D SNP /replace=A; hypothetical protein 440297..440503 Rhizobium leguminosarum bv. trifolii WSM1325 8022759 YP_002984995.1 CDS Rleg_7014 NC_012858.1 440575 440955 R KEGG: hypothetical protein; hypothetical protein complement(440575..440955) Rhizobium leguminosarum bv. trifolii WSM1325 8022760 YP_002984996.1 CDS Rleg_7015 NC_012858.1 441254 441979 R KEGG: rec:RHECIAT_PC0000054 hypothetical protein; putative transcriptional regulator, Crp/Fnr family complement(441254..441979) Rhizobium leguminosarum bv. trifolii WSM1325 8022761 YP_002984997.1 CDS Rleg_7016 NC_012858.1 442113 442385 R KEGG: mch:Mchl_3377 hypothetical protein; hypothetical protein complement(442113..442385) Rhizobium leguminosarum bv. trifolii WSM1325 8022762 YP_002984998.1 CDS Rleg_7017 NC_012858.1 443201 443641 R hypothetical protein complement(443201..443641) Rhizobium leguminosarum bv. trifolii WSM1325 8022763 YP_002984999.1 CDS Rleg_7018 NC_012858.1 444084 444368 D hypothetical protein 444084..444368 Rhizobium leguminosarum bv. trifolii WSM1325 8022764 YP_002985000.1 CDS Rleg_7020 NC_012858.1 445892 446182 D KEGG: rec:RHECIAT_CH0002676 hypothetical protein; hypothetical protein 445892..446182 Rhizobium leguminosarum bv. trifolii WSM1325 8022766 YP_002985001.1 CDS Rleg_7022 NC_012858.1 447552 447707 R hypothetical protein complement(447552..447707) Rhizobium leguminosarum bv. trifolii WSM1325 8022768 YP_002985002.1 CDS Rleg_7023 NC_012858.1 447707 447946 R KEGG: ret:RHE_CH01091 hypothetical protein; hypothetical protein complement(447707..447946) Rhizobium leguminosarum bv. trifolii WSM1325 8022769 YP_002985003.1 CDS Rleg_7024 NC_012858.1 448033 448227 D hypothetical protein 448033..448227 Rhizobium leguminosarum bv. trifolii WSM1325 8022770 YP_002985004.1 CDS Rleg_7025 NC_012858.1 450532 450714 D KEGG: bra:BRADO0858 hypothetical protein; hypothetical protein 450532..450714 Rhizobium leguminosarum bv. trifolii WSM1325 8022771 YP_002985005.1 CDS Rleg_7026 NC_012858.1 451113 452018 R KEGG: atc:AGR_pAT_75 hypothetical protein; hypothetical protein complement(451113..452018) Rhizobium leguminosarum bv. trifolii WSM1325 8022772 YP_002985006.1 CDS Rleg_7027 NC_012858.1 452053 452649 R PFAM: phospholipase/carboxylesterase; KEGG: phospholipase/carboxylesterase ; K06999; phospholipase/carboxylesterase complement(452053..452649) Rhizobium leguminosarum bv. trifolii WSM1325 8022773 YP_002985007.1 CDS Rleg_7028 NC_012858.1 452917 453075 D hypothetical protein 452917..453075 Rhizobium leguminosarum bv. trifolii WSM1325 8022774 YP_002985008.1 CDS Rleg_7029 NC_012858.1 453106 453294 D KEGG: rec:RHECIAT_PB0000199 hypothetical protein; hypothetical protein 453106..453294 Rhizobium leguminosarum bv. trifolii WSM1325 8022775 YP_002985009.1 CDS Rleg_7031 NC_012858.1 454662 454853 D hypothetical protein 454662..454853 Rhizobium leguminosarum bv. trifolii WSM1325 8022777 YP_002985010.1 CDS Rleg_7032 NC_012858.1 455104 455433 D KEGG: mno:Mnod_0083 hypothetical protein; hypothetical protein 455104..455433 Rhizobium leguminosarum bv. trifolii WSM1325 8022778 YP_002985011.1 CDS Rleg_7034 NC_012858.1 455910 456308 R PFAM: protein of unknown function DUF1452; KEGG: ret:RHE_CH01796 hypothetical protein; hypothetical protein complement(455910..456308) Rhizobium leguminosarum bv. trifolii WSM1325 8022780 YP_002985012.1 CDS Rleg_7037 NC_012858.1 457452 457745 D KEGG: ret:RHE_CH02132 hypothetical protein; hypothetical protein 457452..457745 Rhizobium leguminosarum bv. trifolii WSM1325 8022783 YP_002985013.1 CDS Rleg_7038 NC_012858.1 457799 458065 R PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(457799..458065) Rhizobium leguminosarum bv. trifolii WSM1325 8022784 YP_002985014.1 CDS Rleg_7039 NC_012858.1 458203 459099 R PFAM: UspA domain protein; KEGG: mfa:Mfla_2660 hypothetical protein; UspA domain protein complement(458203..459099) Rhizobium leguminosarum bv. trifolii WSM1325 8022785 YP_002985015.1 CDS Rleg_7040 NC_012858.1 459712 460161 R KEGG: rec:RHECIAT_CH0003320 hypothetical protein; hypothetical protein complement(459712..460161) Rhizobium leguminosarum bv. trifolii WSM1325 8022786 YP_002985016.1 CDS Rleg_7041 NC_012858.1 460595 461368 R KEGG: msl:Msil_2190 hypothetical protein; hypothetical protein complement(460595..461368) Rhizobium leguminosarum bv. trifolii WSM1325 8022787 YP_002985017.1 CDS Rleg_7042 NC_012858.1 461555 461887 R hypothetical protein complement(461555..461887) Rhizobium leguminosarum bv. trifolii WSM1325 8022788 YP_002985018.1 CDS Rleg_7045 NC_012858.1 463319 463555 R KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein complement(463319..463555) Rhizobium leguminosarum bv. trifolii WSM1325 8022791 YP_002985019.1 CDS Rleg_7046 NC_012858.1 463708 463890 R KEGG: rec:RHECIAT_CH0003322 hypothetical protein; hypothetical protein complement(463708..463890) Rhizobium leguminosarum bv. trifolii WSM1325 8022792 YP_002985020.1 CDS Rleg_7047 NC_012858.1 464222 465130 D KEGG: rec:RHECIAT_CH0003323 hypothetical protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 464222..465130 Rhizobium leguminosarum bv. trifolii WSM1325 8022793 YP_002985021.1 CDS Rleg_7048 NC_012858.1 465142 465954 D KEGG: rec:RHECIAT_CH0003324 hypothetical protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 465142..465954 Rhizobium leguminosarum bv. trifolii WSM1325 8022794 YP_002985022.1 CDS Rleg_7049 NC_012858.1 465959 466222 D KEGG: rec:RHECIAT_CH0003325 hypothetical protein; hypothetical protein 465959..466222 Rhizobium leguminosarum bv. trifolii WSM1325 8022795 YP_002985023.1 CDS Rleg_7050 NC_012858.1 466934 467824 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator complement(466934..467824) Rhizobium leguminosarum bv. trifolii WSM1325 8022796 YP_002985024.1 CDS Rleg_7051 NC_012858.1 468430 468765 R KEGG: mno:Mnod_0562 hypothetical protein; hypothetical protein complement(468430..468765) Rhizobium leguminosarum bv. trifolii WSM1325 8022797 YP_002985025.1 CDS Rleg_7052 NC_012858.1 468768 469079 R hypothetical protein complement(468768..469079) Rhizobium leguminosarum bv. trifolii WSM1325 8022798 YP_002985026.1 CDS Rleg_7053 NC_012858.1 469326 469586 D hypothetical protein 469326..469586 Rhizobium leguminosarum bv. trifolii WSM1325 8022799 YP_002985027.1 CDS Rleg_7054 NC_012858.1 469745 469936 R KEGG: bbr:BB1712 hypothetical protein; hypothetical protein complement(469745..469936) Rhizobium leguminosarum bv. trifolii WSM1325 8022800 YP_002985028.1 CDS Rleg_7055 NC_012858.1 469936 470604 R KEGG: ret:RHE_CH01107 hypothetical protein; hypothetical protein complement(469936..470604) Rhizobium leguminosarum bv. trifolii WSM1325 8022801 YP_002985029.1 CDS Rleg_7057 NC_012858.1 470767 471033 R PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(470767..471033) Rhizobium leguminosarum bv. trifolii WSM1325 8022803 YP_002985030.1 CDS Rleg_7058 NC_012858.1 471330 473444 R KEGG: mno:Mnod_7561 ATPase AAA; TIGRFAM: ATPase AAA; PFAM: AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA complement(471330..473444) Rhizobium leguminosarum bv. trifolii WSM1325 8022804 YP_002985031.1 CDS Rleg_7059 NC_012858.1 473802 474170 D hypothetical protein 473802..474170 Rhizobium leguminosarum bv. trifolii WSM1325 8022805 YP_002985032.1 CDS Rleg_7060 NC_012858.1 474180 474320 R KEGG: rec:RHECIAT_PB0000068 hypothetical protein; hypothetical protein complement(474180..474320) Rhizobium leguminosarum bv. trifolii WSM1325 8022806 YP_002985033.1 CDS Rleg_7061 NC_012858.1 474335 474661 D KEGG: rec:RHECIAT_CH0003325 hypothetical protein; hypothetical protein 474335..474661 Rhizobium leguminosarum bv. trifolii WSM1325 8022807 YP_002985034.1 CDS Rleg_7062 NC_012858.1 474694 476574 R KEGG: smd:Smed_5689 hypothetical protein; hypothetical protein complement(474694..476574) Rhizobium leguminosarum bv. trifolii WSM1325 8022808 YP_002985035.1 CDS Rleg_7063 NC_012858.1 476607 477209 R KEGG: smd:Smed_5690 hypothetical protein; hypothetical protein complement(476607..477209) Rhizobium leguminosarum bv. trifolii WSM1325 8022809 YP_002985036.1 CDS Rleg_7064 NC_012858.1 477436 480576 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; KEGG: smd:Smed_5691 sterile alpha motif SAM protein; SNP /replace=G; SNP /replace=A; SNP /replace=A; SNP /replace=G; SNP /replace=T; SNP /replace=G; SNP /replace=G; SNP /replace=G; SNP /replace=C; adenylate/guanylate cyclase 477436..480576 Rhizobium leguminosarum bv. trifolii WSM1325 8022810 YP_002985037.1 CDS Rleg_7065 NC_012858.1 481548 482438 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_4467 LysR family transcriptional regulator; LysR family transcriptional regulator complement(481548..482438) Rhizobium leguminosarum bv. trifolii WSM1325 8022811 YP_002985038.1 CDS Rleg_7066 NC_012858.1 482795 483067 D PFAM: Arc domain protein DNA binding domain protein; KEGG: aav:Aave_1717 Arc domain protein DNA binding domain protein; Arc domain protein DNA binding domain protein 482795..483067 Rhizobium leguminosarum bv. trifolii WSM1325 8022812 YP_002985039.1 CDS Rleg_7067 NC_012858.1 483076 483357 R hypothetical protein complement(483076..483357) Rhizobium leguminosarum bv. trifolii WSM1325 8022813 YP_002985040.1 CDS Rleg_7068 NC_012858.1 483596 484009 D TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: xoo:XOO0606 XorII very-short-patch-repair endonuclease; DNA mismatch endonuclease Vsr 483596..484009 Rhizobium leguminosarum bv. trifolii WSM1325 8022814 YP_002985041.1 CDS Rleg_7069 NC_012858.1 484009 485190 D TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ngk:NGK_0307 DNA cytosine methyltransferase M.NgoMIII; DNA-cytosine methyltransferase 484009..485190 Rhizobium leguminosarum bv. trifolii WSM1325 8022815 YP_002985042.1 CDS Rleg_7070 NC_012858.1 485187 485945 D hypothetical protein 485187..485945 Rhizobium leguminosarum bv. trifolii WSM1325 8022816 YP_002985043.1 CDS Rleg_7071 NC_012858.1 486534 486716 R KEGG: rec:RHECIAT_PA0000068 hypothetical protein; hypothetical protein complement(486534..486716) Rhizobium leguminosarum bv. trifolii WSM1325 8022817 YP_002985044.1 CDS Rleg_7072 NC_012858.1 486787 487428 D KEGG: ret:RHE_PE00063 putative hydrolase protein; putative hydrolase protein 486787..487428 Rhizobium leguminosarum bv. trifolii WSM1325 8022818 YP_002985045.1 CDS Rleg_7073 NC_012858.1 487425 488120 R PFAM: RES domain protein; KEGG: rec:RHECIAT_PA0000066 hypothetical protein; RES domain protein complement(487425..488120) Rhizobium leguminosarum bv. trifolii WSM1325 8022819 YP_002985046.1 CDS Rleg_7074 NC_012858.1 488117 488638 R KEGG: ret:RHE_PE00061 hypothetical protein; hypothetical protein complement(488117..488638) Rhizobium leguminosarum bv. trifolii WSM1325 8022820 YP_002985047.1 CDS Rleg_7075 NC_012858.1 488868 489443 D KEGG: rec:RHECIAT_CH0002395 hypothetical protein; hypothetical protein 488868..489443 Rhizobium leguminosarum bv. trifolii WSM1325 8022821 YP_002985048.1 CDS Rleg_7076 NC_012858.1 489842 490759 R TIGRFAM: pca operon transcription factor PcaQ; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_PA0000064 transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(489842..490759) Rhizobium leguminosarum bv. trifolii WSM1325 8022822 YP_002985049.1 CDS Rleg_7077 NC_012858.1 490854 491663 D KEGG: rec:RHECIAT_PA0000063 beta-ketoadipate enol-lactone hydrolase protein; TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; Ndr family protein; 3-oxoadipate enol-lactonase 490854..491663 Rhizobium leguminosarum bv. trifolii WSM1325 8022363 YP_002985050.1 CDS Rleg_7078 NC_012858.1 491660 492064 D KEGG: ret:RHE_PE00058 gamma-carboxymuconolactone decarboxylase protein; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase 491660..492064 Rhizobium leguminosarum bv. trifolii WSM1325 8022364 YP_002985051.1 CDS Rleg_7079 NC_012858.1 492074 492823 D TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: ret:RHE_PE00057 protocatechuate 3,4-dioxygenase beta chain protein; protocatechuate 3,4-dioxygenase, beta subunit 492074..492823 Rhizobium leguminosarum bv. trifolii WSM1325 8022365 YP_002985052.1 CDS Rleg_7080 NC_012858.1 492826 493437 D KEGG: ret:RHE_PE00056 protocatechuate 3,4-dioxygenase alpha chain protein; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase, alpha subunit 492826..493437 Rhizobium leguminosarum bv. trifolii WSM1325 8022366 YP_002985053.1 CDS Rleg_7081 NC_012858.1 493640 494686 D Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 493640..494686 Rhizobium leguminosarum bv. trifolii WSM1325 8022367 YP_002985054.1 CDS Rleg_7082 NC_012858.1 494683 495006 R KEGG: sme:SMa2151 putative DNA-binding protein; XRE family transcriptional regulator complement(494683..495006) Rhizobium leguminosarum bv. trifolii WSM1325 8022368 YP_002985055.1 CDS Rleg_7084 NC_012858.1 495324 496091 D catalyzes the formation of 5-dehydro-D-gluconate from D-gluconate; gluconate 5-dehydrogenase 495324..496091 Rhizobium leguminosarum bv. trifolii WSM1325 8022370 YP_002985056.1 CDS Rleg_7085 NC_012858.1 496144 496974 R PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; UBA/THIF-type NAD/FAD binding protein; KEGG: azc:AZC_1453 shikimate dehydrogenase family protein; Shikimate dehydrogenase substrate binding domain protein complement(496144..496974) Rhizobium leguminosarum bv. trifolii WSM1325 8022371 YP_002985057.1 CDS Rleg_7086 NC_012858.1 496979 498040 R PFAM: oxidoreductase; Oxidoreductase domain; KEGG: bja:bll6385 putative oxidoreductase; oxidoreductase complement(496979..498040) Rhizobium leguminosarum bv. trifolii WSM1325 8022372 YP_002985058.1 CDS Rleg_7087 NC_012858.1 498099 498863 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: azc:AZC_1452 ABC transporter ATP-binding protein; ABC transporter complement(498099..498863) Rhizobium leguminosarum bv. trifolii WSM1325 8022373 YP_002985059.1 CDS Rleg_7088 NC_012858.1 498917 499558 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1450 ABC transporter permease protein; polar amino acid ABC transporter, inner membrane subunit complement(498917..499558) Rhizobium leguminosarum bv. trifolii WSM1325 8022374 YP_002985060.1 CDS Rleg_7089 NC_012858.1 499569 500237 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1449 ABC transporter permease protein; polar amino acid ABC transporter, inner membrane subunit complement(499569..500237) Rhizobium leguminosarum bv. trifolii WSM1325 8022375 YP_002985061.1 CDS Rleg_7090 NC_012858.1 500269 500712 R PFAM: dehydroquinase class II; KEGG: azc:AZC_1447 dehydroquinase; 3-dehydroquinate dehydratase complement(500269..500712) Rhizobium leguminosarum bv. trifolii WSM1325 8022376 YP_002985062.1 CDS Rleg_7091 NC_012858.1 500823 501653 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: azc:AZC_1451 ABC transporter substrate-binding protein; extracellular solute-binding protein family 3 complement(500823..501653) Rhizobium leguminosarum bv. trifolii WSM1325 8022377 YP_002985063.1 CDS Rleg_7092 NC_012858.1 501904 503799 D PFAM: xylose isomerase; KEGG: hppD; 4-hydroxyphenylpyruvate dioxygenase ; K00457 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 501904..503799 Rhizobium leguminosarum bv. trifolii WSM1325 8022378 YP_002985064.1 CDS Rleg_7093 NC_012858.1 503912 504586 R PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: smd:Smed_5700 GntR family transcriptional regulator; GntR family transcriptional regulator complement(503912..504586) Rhizobium leguminosarum bv. trifolii WSM1325 8022379 YP_002985065.1 CDS Rleg_7094 NC_012858.1 504661 505329 R PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: jan:Jann_4140 GntR family transcriptional regulator; GntR family transcriptional regulator complement(504661..505329) Rhizobium leguminosarum bv. trifolii WSM1325 8022380 YP_002985066.1 CDS Rleg_7095 NC_012858.1 506047 507111 R PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: rec:RHECIAT_CH0001173 hypothetical protein; Tetratricopeptide TPR_2 repeat protein complement(506047..507111) Rhizobium leguminosarum bv. trifolii WSM1325 8022381 YP_002985067.1 CDS Rleg_7096 NC_012858.1 507422 507778 D KEGG: rec:RHECIAT_CH0001172 hypothetical protein; hypothetical protein 507422..507778 Rhizobium leguminosarum bv. trifolii WSM1325 8022382 YP_002985068.1 CDS Rleg_7097 NC_012858.1 508163 508465 R KEGG: esa:ESA_02044 hypothetical protein; hypothetical protein complement(508163..508465) Rhizobium leguminosarum bv. trifolii WSM1325 8022383 YP_002985069.1 CDS Rleg_7098 NC_012858.1 508603 508833 D KEGG: rec:RHECIAT_CH0001807 hypothetical protein; hypothetical protein 508603..508833 Rhizobium leguminosarum bv. trifolii WSM1325 8022384 YP_002985070.1 CDS Rleg_7099 NC_012858.1 509315 510145 D KEGG: rec:RHECIAT_PA0000058 putative hydrolase protein, beta-lactamase superfamily; putative hydrolase protein, beta-lactamase superfamily 509315..510145 Rhizobium leguminosarum bv. trifolii WSM1325 8022385 YP_002985071.1 CDS Rleg_7100 NC_012858.1 510302 510676 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_PE00053 hypothetical protein; glutathione-dependent formaldehyde-activating GFA 510302..510676 Rhizobium leguminosarum bv. trifolii WSM1325 8022386 YP_002985072.1 CDS Rleg_7101 NC_012858.1 510701 511570 D PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PE00052 putative hydrolase protein; alpha/beta hydrolase fold protein 510701..511570 Rhizobium leguminosarum bv. trifolii WSM1325 8022387 YP_002985073.1 CDS Rleg_7102 NC_012858.1 511678 512436 R KEGG: rec:RHECIAT_PA0000055 hypothetical protein; hypothetical protein complement(511678..512436) Rhizobium leguminosarum bv. trifolii WSM1325 8022388 YP_002985074.1 CDS Rleg_7103 NC_012858.1 512436 513524 R PFAM: glycosyl transferase group 1; KEGG: rec:RHECIAT_PA0000054 putative glycosyltransferase protein; glycosyl transferase group 1 complement(512436..513524) Rhizobium leguminosarum bv. trifolii WSM1325 8022389 YP_002985075.1 CDS Rleg_7104 NC_012858.1 513704 515422 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; ferredoxin; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_PE00049 adenylate cyclase protein; adenylate/guanylate cyclase 513704..515422 Rhizobium leguminosarum bv. trifolii WSM1325 8022390 YP_002985076.1 CDS Rleg_7105 NC_012858.1 515422 516300 D TIGRFAM: methyltransferase FkbM family; KEGG: rec:RHECIAT_PA0000052 hypothetical protein; SNP /replace=G; methyltransferase FkbM family 515422..516300 Rhizobium leguminosarum bv. trifolii WSM1325 8022391 YP_002985077.1 CDS Rleg_7106 NC_012858.1 516362 516739 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: cvi:CV_2781 hypothetical protein; glutathione-dependent formaldehyde-activating GFA complement(516362..516739) Rhizobium leguminosarum bv. trifolii WSM1325 8022392 YP_002985078.1 CDS Rleg_7107 NC_012858.1 516920 518263 R PFAM: Chloride channel core; KEGG: chloride channel protein; SNP /replace=C; Chloride channel core complement(516920..518263) Rhizobium leguminosarum bv. trifolii WSM1325 8022393 YP_002985079.1 CDS nhaA NC_012858.1 518908 520098 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 518908..520098 Rhizobium leguminosarum bv. trifolii WSM1325 8022394 YP_002985080.1 CDS Rleg_7109 NC_012858.1 520411 521316 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2548 FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase complement(520411..521316) Rhizobium leguminosarum bv. trifolii WSM1325 8022362 YP_002985081.1 CDS Rleg_7110 NC_012858.1 521448 521903 D PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: atc:AGR_C_402 hypothetical protein; BadM/Rrf2 family transcriptional regulator 521448..521903 Rhizobium leguminosarum bv. trifolii WSM1325 8022477 YP_002985082.1 CDS Rleg_7111 NC_012858.1 522323 524113 D PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: ret:RHE_CH02028 saccharide ABC transporter, ATP-binding protein; ABC transporter 522323..524113 Rhizobium leguminosarum bv. trifolii WSM1325 8022478 YP_002985083.1 CDS Rleg_7112 NC_012858.1 524241 524720 R KEGG: rec:RHECIAT_PA0000050 hypothetical protein; hypothetical protein complement(524241..524720) Rhizobium leguminosarum bv. trifolii WSM1325 8022479 YP_002985084.1 CDS Rleg_7113 NC_012858.1 524894 526120 D KEGG: rec:RHECIAT_PA0000049 hypothetical protein; hypothetical protein 524894..526120 Rhizobium leguminosarum bv. trifolii WSM1325 8022480 YP_002985085.1 CDS Rleg_7114 NC_012858.1 526192 526566 R KEGG: predicted protein; hypothetical protein complement(526192..526566) Rhizobium leguminosarum bv. trifolii WSM1325 8022481 YP_002985086.1 CDS Rleg_7115 NC_012858.1 526629 527144 R KEGG: mno:Mnod_5305 glyoxalase/bleomycin resistance protein/dioxygenase; hypothetical protein complement(526629..527144) Rhizobium leguminosarum bv. trifolii WSM1325 8022482 YP_002985087.1 CDS Rleg_7116 NC_012858.1 527141 527719 R PFAM: isochorismatase hydrolase; KEGG: ret:RHE_PC00116 hypothetical protein; isochorismatase hydrolase complement(527141..527719) Rhizobium leguminosarum bv. trifolii WSM1325 8022483 YP_002985088.1 CDS nadE NC_012858.1 527784 528617 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(527784..528617) Rhizobium leguminosarum bv. trifolii WSM1325 8022484 YP_002985089.1 CDS Rleg_7118 NC_012858.1 528662 528907 R KEGG: rec:RHECIAT_PC0000306 hypothetical protein; hypothetical protein complement(528662..528907) Rhizobium leguminosarum bv. trifolii WSM1325 8022485 YP_002985090.1 CDS Rleg_7119 NC_012858.1 529021 529554 D KEGG: rec:RHECIAT_PC0000311 hypothetical protein; hypothetical protein 529021..529554 Rhizobium leguminosarum bv. trifolii WSM1325 8022486 YP_002985091.1 CDS Rleg_7121 NC_012858.1 530409 531761 R KEGG: rec:RHECIAT_PA0000046 probable UDP-glucose 6-dehydrogenase protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase NAD-binding; nucleotide sugar dehydrogenase complement(530409..531761) Rhizobium leguminosarum bv. trifolii WSM1325 8022488 YP_002985092.1 CDS Rleg_7122 NC_012858.1 532223 533566 D KEGG: rec:RHECIAT_PA0000045 adenylate cyclase protein; putative adenylate/guanylate cyclase 532223..533566 Rhizobium leguminosarum bv. trifolii WSM1325 8022489 YP_002985093.1 CDS Rleg_7123 NC_012858.1 533721 535610 D PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00042 oligopeptide ABC transporter, ATP-binding protein; ABC transporter 533721..535610 Rhizobium leguminosarum bv. trifolii WSM1325 8022490 YP_002985094.1 CDS Rleg_7124 NC_012858.1 535610 537517 D PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PA0000043 probable oligopeptide ABC transporter, substrate-binding protein; extracellular solute-binding protein family 5 535610..537517 Rhizobium leguminosarum bv. trifolii WSM1325 8022491 YP_002985095.1 CDS Rleg_7125 NC_012858.1 537521 538519 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00040 oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 537521..538519 Rhizobium leguminosarum bv. trifolii WSM1325 8022492 YP_002985096.1 CDS Rleg_7126 NC_012858.1 538519 539691 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00039 oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 538519..539691 Rhizobium leguminosarum bv. trifolii WSM1325 8022493 YP_002985097.1 CDS Rleg_7127 NC_012858.1 539788 540996 D KEGG: rec:RHECIAT_PA0000040 membrane-anchored protein; membrane-anchored protein 539788..540996 Rhizobium leguminosarum bv. trifolii WSM1325 8022494 YP_002985098.1 CDS Rleg_7128 NC_012858.1 541006 542253 D PFAM: glycosyl transferase group 1; KEGG: rec:RHECIAT_PA0000039 glycosyltransferase protein; glycosyl transferase group 1 541006..542253 Rhizobium leguminosarum bv. trifolii WSM1325 8022495 YP_002985099.1 CDS Rleg_7129 NC_012858.1 542250 543395 D PFAM: Glycosyltransferase 28 domain; KEGG: rec:RHECIAT_PA0000038 putative glycosyltransferase protein; glycosyltransferase 28 542250..543395 Rhizobium leguminosarum bv. trifolii WSM1325 8022496 YP_002985100.1 CDS Rleg_7130 NC_012858.1 543578 546292 D PFAM: ABC transporter; KEGG: rec:RHECIAT_PA0000037 putative multidrug ABC transporter, ATP-binding and permease protein; ABC transporter 543578..546292 Rhizobium leguminosarum bv. trifolii WSM1325 8022497 YP_002985101.1 CDS Rleg_7131 NC_012858.1 546395 546862 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: rec:RHECIAT_PA0000036 putative transcriptional regulator protein; putative transcriptional regulator, Crp/Fnr family 546395..546862 Rhizobium leguminosarum bv. trifolii WSM1325 8022498 YP_002985102.1 CDS Rleg_7132 NC_012858.1 546871 547158 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: ret:RHE_PE00033 hypothetical protein; addiction module toxin, RelE/StbE family complement(546871..547158) Rhizobium leguminosarum bv. trifolii WSM1325 8022499 YP_002985103.1 CDS Rleg_7133 NC_012858.1 547155 547619 R KEGG: rec:RHECIAT_PA0000033 hypothetical protein; hypothetical protein complement(547155..547619) Rhizobium leguminosarum bv. trifolii WSM1325 8022500 YP_002985104.1 CDS Rleg_7134 NC_012858.1 547753 549084 R PFAM: General substrate transporter; KEGG: rec:RHECIAT_PA0000031 putative ABC transporter, permease protein; SNP /replace=A; SNP /replace=T; SNP /replace=G; SNP /replace=C; SNP /replace=A; General substrate transporter complement(547753..549084) Rhizobium leguminosarum bv. trifolii WSM1325 8022501 YP_002985105.1 CDS Rleg_7135 NC_012858.1 549533 550648 D TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II; KEGG: ret:RHE_PE00030 cytochrome o ubiquinol oxidase, subunit II protein; ubiquinol oxidase, subunit II 549533..550648 Rhizobium leguminosarum bv. trifolii WSM1325 8022502 YP_002985106.1 CDS Rleg_7136 NC_012858.1 550691 552694 D KEGG: rec:RHECIAT_PA0000029 cytochrome o ubiquinol oxidase protein, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase, subunit I 550691..552694 Rhizobium leguminosarum bv. trifolii WSM1325 8022503 YP_002985107.1 CDS Rleg_7137 NC_012858.1 552694 553320 D TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: ret:RHE_PE00028 cytochrome o ubiquinol oxidase, subunit III protein; cytochrome o ubiquinol oxidase, subunit III 552694..553320 Rhizobium leguminosarum bv. trifolii WSM1325 8022504 YP_002985108.1 CDS Rleg_7138 NC_012858.1 553317 553718 D TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: rec:RHECIAT_PA0000027 cytochrome o ubiquinol oxidase protein, subunit IV; cytochrome o ubiquinol oxidase subunit IV 553317..553718 Rhizobium leguminosarum bv. trifolii WSM1325 8022505 YP_002985109.1 CDS Rleg_7139 NC_012858.1 553715 554506 D PFAM: Surfeit locus 1 family protein; KEGG: rec:RHECIAT_PA0000026 probable cytochrome c oxidase complex biogenesis factor protein; Surfeit locus 1 family protein 553715..554506 Rhizobium leguminosarum bv. trifolii WSM1325 8022506 YP_002985110.1 CDS Rleg_7140 NC_012858.1 554513 556441 R KEGG: rec:RHECIAT_PA0000024 probable two-component sensor histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(554513..556441) Rhizobium leguminosarum bv. trifolii WSM1325 8022507 YP_002985111.1 CDS Rleg_7141 NC_012858.1 556510 557916 R KEGG: ret:RHE_PE00023 hypothetical protein; hypothetical protein complement(556510..557916) Rhizobium leguminosarum bv. trifolii WSM1325 8022508 YP_002985112.1 CDS Rleg_7142 NC_012858.1 558269 558886 R KEGG: ret:RHE_PE00021 hypothetical protein; hypothetical protein complement(558269..558886) Rhizobium leguminosarum bv. trifolii WSM1325 8022509 YP_002985113.1 CDS Rleg_7143 NC_012858.1 559207 560970 D PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000021 putative ABC transporter, ATP-binding protein; SNP /replace=T; SNP /replace=G; SNP /replace=G; ABC transporter 559207..560970 Rhizobium leguminosarum bv. trifolii WSM1325 8022510 YP_002985114.1 CDS Rleg_7144 NC_012858.1 561062 562960 D PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000020 putative multidrug ABC transporter, ATP-binding protein; ABC transporter 561062..562960 Rhizobium leguminosarum bv. trifolii WSM1325 8022511 YP_002985115.1 CDS Rleg_7145 NC_012858.1 563168 563485 D KEGG: ret:RHE_PE00018 hypothetical protein; hypothetical protein 563168..563485 Rhizobium leguminosarum bv. trifolii WSM1325 8022512 YP_002985116.1 CDS Rleg_7146 NC_012858.1 563567 564886 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_PA0000017 probable transcriptional regulator protein, LacI family; LacI family transcriptional regulator 563567..564886 Rhizobium leguminosarum bv. trifolii WSM1325 8022513 YP_002985117.1 CDS Rleg_7147 NC_012858.1 564894 566186 R PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_PA0000016 putative tartrate transporter protein; major facilitator superfamily MFS_1 complement(564894..566186) Rhizobium leguminosarum bv. trifolii WSM1325 8022514 YP_002985118.1 CDS Rleg_7148 NC_012858.1 566328 567527 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_PA0000015 putative multidrug transporter protein, Bcr/CflA subfamily; drug resistance transporter, Bcr/CflA subfamily complement(566328..567527) Rhizobium leguminosarum bv. trifolii WSM1325 8022515 YP_002985119.1 CDS Rleg_7149 NC_012858.1 567866 568540 D PFAM: regulatory protein TetR; KEGG: ret:RHE_PE00014 TetR family transcriptional regulator; TetR family transcriptional regulator 567866..568540 Rhizobium leguminosarum bv. trifolii WSM1325 8022516 YP_002985120.1 CDS Rleg_7150 NC_012858.1 568608 569048 R LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; response regulator complement(568608..569048) Rhizobium leguminosarum bv. trifolii WSM1325 8022517 YP_002985121.1 CDS Rleg_7151 NC_012858.1 569333 569872 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_PA0000012 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 569333..569872 Rhizobium leguminosarum bv. trifolii WSM1325 8022518 YP_002985122.1 CDS Rleg_7152 NC_012858.1 569927 570631 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(569927..570631) Rhizobium leguminosarum bv. trifolii WSM1325 8022519 YP_002985123.1 CDS Rleg_7153 NC_012858.1 570792 576299 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; N/apple PAN domain protein; SMART: Apple; KEGG: ret:RHE_PE00010 hypothetical protein; alpha-2-macroglobulin domain protein 570792..576299 Rhizobium leguminosarum bv. trifolii WSM1325 8022520 YP_002985124.1 CDS Rleg_7154 NC_012858.1 576296 578374 D TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; Penicillin-binding domain protein; penicillin-binding protein transpeptidase; KEGG: rec:RHECIAT_PA0000009 probable penicillin-binding protein; penicillin-binding protein 1C 576296..578374 Rhizobium leguminosarum bv. trifolii WSM1325 8022521 YP_002985125.1 CDS Rleg_7155 NC_012858.1 578433 581042 D KEGG: ret:RHE_PE00008 putative maltooligosyl trehalose synthase protein; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase 578433..581042 Rhizobium leguminosarum bv. trifolii WSM1325 8022522 YP_002985126.1 CDS Rleg_7156 NC_012858.1 581149 583674 D KEGG: rec:RHECIAT_PA0000007 copper-transporting ATPase protein; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; YHS domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 581149..583674 Rhizobium leguminosarum bv. trifolii WSM1325 8022523 YP_002985127.1 CDS Rleg_7157 NC_012858.1 583684 584073 D KEGG: ret:RHE_PE00006 copper eflux transcriptional regulator protein; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 583684..584073 Rhizobium leguminosarum bv. trifolii WSM1325 8022524 YP_002985128.1 CDS Rleg_7158 NC_012858.1 584093 584401 R hypothetical protein complement(584093..584401) Rhizobium leguminosarum bv. trifolii WSM1325 8022525 YP_002985129.1 CDS Rleg_7159 NC_012858.1 584589 585128 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; RNA polymerase sigma factor 584589..585128 Rhizobium leguminosarum bv. trifolii WSM1325 8022526 YP_002985130.1 CDS Rleg_7160 NC_012858.1 585115 585882 D KEGG: rec:RHECIAT_PA0000003 hypothetical protein; putative transmembrane anti-sigma factor 585115..585882 Rhizobium leguminosarum bv. trifolii WSM1325 8022527 YP_002985131.1 CDS Rleg_7161 NC_012858.1 585903 586613 D PFAM: protein of unknown function UPF0005; KEGG: rec:RHECIAT_PA0000002 hypothetical protein; hypothetical protein 585903..586613 Rhizobium leguminosarum bv. trifolii WSM1325 8022528 YP_002985132.1 CDS Rleg_7162 NC_012858.1 586879 587079 D KEGG: sme:SMa1014 HmrR; HmrR 586879..587079 Rhizobium leguminosarum bv. trifolii WSM1325 8022529 YP_002985133.1 CDS Rleg_7163 NC_012858.1 587106 587642 R KEGG: ret:RHE_CH02511 putative cytochrome c-like protein; putative cytochrome c-like protein complement(587106..587642) Rhizobium leguminosarum bv. trifolii WSM1325 8022530 YP_002985134.1 CDS Rleg_7164 NC_012858.1 587770 588102 R KEGG: ret:RHE_CH02512 hypothetical protein; hypothetical protein complement(587770..588102) Rhizobium leguminosarum bv. trifolii WSM1325 8022531 YP_002985135.1 CDS Rleg_7165 NC_012858.1 588114 588545 R PFAM: protein of unknown function DUF305; KEGG: ret:RHE_CH02513 hypothetical protein; hypothetical protein complement(588114..588545) Rhizobium leguminosarum bv. trifolii WSM1325 8022532 YP_002985136.1 CDS Rleg_7166 NC_012858.1 588586 588915 R hypothetical protein complement(588586..588915) Rhizobium leguminosarum bv. trifolii WSM1325 8022533 YP_002985137.1 CDS Rleg_7167 NC_012858.1 589116 589571 D KEGG: ret:RHE_CH02514 hypothetical protein; hypothetical protein 589116..589571 Rhizobium leguminosarum bv. trifolii WSM1325 8022534 YP_002985138.1 CDS Rleg_7169 NC_012858.1 590566 591705 R PFAM: protein of unknown function DUF1612; KEGG: rec:RHECIAT_PA0000001 hypothetical protein; hypothetical protein complement(590566..591705) Rhizobium leguminosarum bv. trifolii WSM1325 8022536 YP_002985139.1 CDS Rleg_7170 NC_012858.1 591886 593100 R PFAM: replication protein C; KEGG: rec:RHECIAT_PA0000383 plasmid replication protein RepCa; replication initiation protein RepC complement(591886..593100) Rhizobium leguminosarum bv. trifolii WSM1325 8022537 YP_002985140.1 CDS Rleg_7171 NC_012858.1 593255 594250 R KEGG: rec:RHECIAT_PA0000382 plasmid partitioning protein RepBa; TIGRFAM: plasmid partitioning protein RepB; parB-like partition protein; PFAM: RepB plasmid partition; ParB domain protein nuclease; SMART: ParB domain protein nuclease; plasmid partitioning protein RepB complement(593255..594250) Rhizobium leguminosarum bv. trifolii WSM1325 8022538 YP_002985141.1 CDS Rleg_7172 NC_012858.1 594247 595443 R TIGRFAM: plasmid partitioning protein RepA; PFAM: Cobyrinic acid ac-diamide synthase; regulatory protein MerR; KEGG: rec:RHECIAT_PA0000381 plasmid partitioning protein RepAa; plasmid partitioning protein RepA complement(594247..595443) Rhizobium leguminosarum bv. trifolii WSM1325 8022539 YP_002985142.1 CDS Rleg_7173 NC_012858.1 595647 596411 D catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 595647..596411 Rhizobium leguminosarum bv. trifolii WSM1325 8022540 YP_002985143.1 CDS Rleg_7174 NC_012858.1 596484 597866 D TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: ret:RHE_PE00455 sulfite reductase, beta subunit (hemoprotein) protein; SNP /replace=A; precorrin-3B synthase 596484..597866 Rhizobium leguminosarum bv. trifolii WSM1325 8022541 YP_002985144.1 CDS cobH NC_012858.1 597869 598501 D catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 597869..598501 Rhizobium leguminosarum bv. trifolii WSM1325 8022542 YP_002985145.1 CDS Rleg_7176 NC_012858.1 598498 599229 D catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase 598498..599229 Rhizobium leguminosarum bv. trifolii WSM1325 8022543 YP_002985146.1 CDS Rleg_7177 NC_012858.1 599226 599990 D catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; precorrin-3B C17-methyltransferase 599226..599990 Rhizobium leguminosarum bv. trifolii WSM1325 8022544 YP_002985147.1 CDS Rleg_7178 NC_012858.1 599954 600724 R CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase complement(599954..600724) Rhizobium leguminosarum bv. trifolii WSM1325 8022545 YP_002985148.1 CDS Rleg_7179 NC_012858.1 600723 601955 D KEGG: ret:RHE_PE00450 precorrin-6Y C5,15-methyltransferase (decarboxylating) protein; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 600723..601955 Rhizobium leguminosarum bv. trifolii WSM1325 8022546 YP_002985149.1 CDS Rleg_7180 NC_012858.1 601960 602718 D TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rec:RHECIAT_PA0000372 precorrin-4 c(11)-methyltransferase protein; precorrin-4 C11-methyltransferase 601960..602718 Rhizobium leguminosarum bv. trifolii WSM1325 8022547 YP_002985150.1 CDS Rleg_7181 NC_012858.1 602819 603631 R PFAM: xylose isomerase; KEGG: rec:RHECIAT_PA0000371 putative sugar epimerase protein; xylose isomerase complement(602819..603631) Rhizobium leguminosarum bv. trifolii WSM1325 8022548 YP_002985151.1 CDS Rleg_7182 NC_012858.1 603793 604821 R PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rec:RHECIAT_PA0000370 probable transcriptional regulator protein, LacI family; LacI family transcriptional regulator complement(603793..604821) Rhizobium leguminosarum bv. trifolii WSM1325 8022549 YP_002985152.1 CDS Rleg_7183 NC_012858.1 604953 606041 D PFAM: fatty acid desaturase; KEGG: rec:RHECIAT_PA0000369 hydrocarbon oxigenase protein; fatty acid desaturase 604953..606041 Rhizobium leguminosarum bv. trifolii WSM1325 8022550 YP_002985153.1 CDS Rleg_7184 NC_012858.1 606063 606377 D TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ret:RHE_PE00445 ferredoxin of the Rieseke type protein; Rieske (2Fe-2S) domain protein, MocE subfamily 606063..606377 Rhizobium leguminosarum bv. trifolii WSM1325 8022551 YP_002985154.1 CDS Rleg_7185 NC_012858.1 606389 607615 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rec:RHECIAT_PA0000367 ferredoxin--NAD(+) reductase protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 606389..607615 Rhizobium leguminosarum bv. trifolii WSM1325 8022552 YP_002985155.1 CDS Rleg_7186 NC_012858.1 607658 608470 D PFAM: Ketopantoate hydroxymethyltransferase; KEGG: rec:RHECIAT_PA0000366 probable ketopantoate hydroxymethyltransferase protein; 3-methyl-2-oxobutanoate hydroxymethyltransferase 607658..608470 Rhizobium leguminosarum bv. trifolii WSM1325 8022553 YP_002985156.1 CDS Rleg_7187 NC_012858.1 608602 609498 D KEGG: rec:RHECIAT_PA0000365 hypothetical protein; hypothetical protein 608602..609498 Rhizobium leguminosarum bv. trifolii WSM1325 8022554 YP_002985157.1 CDS Rleg_7188 NC_012858.1 609568 610539 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 609568..610539 Rhizobium leguminosarum bv. trifolii WSM1325 8022555 YP_002985158.1 CDS Rleg_7189 NC_012858.1 610536 612077 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 610536..612077 Rhizobium leguminosarum bv. trifolii WSM1325 8022556 YP_002985159.1 CDS Rleg_7190 NC_012858.1 612079 612978 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 612079..612978 Rhizobium leguminosarum bv. trifolii WSM1325 8022557 YP_002985160.1 CDS Rleg_7193 NC_012858.1 614467 616392 D PFAM: transcriptional activator domain; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rec:RHECIAT_PA0000361 putative trifolitoxin related protein; SNP /replace=C; SNP /replace=C; SARP family transcriptional regulator 614467..616392 Rhizobium leguminosarum bv. trifolii WSM1325 8022899 YP_002985161.1 CDS Rleg_7194 NC_012858.1 616498 616641 D hypothetical protein 616498..616641 Rhizobium leguminosarum bv. trifolii WSM1325 8022900 YP_002985162.1 CDS Rleg_7195 NC_012858.1 616655 617917 D PFAM: protein of unknown function DUF181; KEGG: rec:RHECIAT_PA0000360 hypothetical protein; hypothetical protein 616655..617917 Rhizobium leguminosarum bv. trifolii WSM1325 8022901 YP_002985163.1 CDS Rleg_7196 NC_012858.1 617914 618657 D PFAM: TfuA domain protein core; KEGG: ret:RHE_PE00436 hypothetical protein; TfuA domain protein core 617914..618657 Rhizobium leguminosarum bv. trifolii WSM1325 8022902 YP_002985164.1 CDS Rleg_7197 NC_012858.1 618724 618990 D KEGG: rec:RHECIAT_PA0000358 hypothetical protein; hypothetical protein 618724..618990 Rhizobium leguminosarum bv. trifolii WSM1325 8022903 YP_002985165.1 CDS Rleg_7198 NC_012858.1 619072 619476 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_PA0000357 putative transcriptional regulator protein, Cro/CI family; XRE family transcriptional regulator complement(619072..619476) Rhizobium leguminosarum bv. trifolii WSM1325 8022904 YP_002985166.1 CDS Rleg_7199 NC_012858.1 619679 620515 R PFAM: amidohydrolase; KEGG: rec:RHECIAT_PA0000354 putative amidohydrolase protein; amidohydrolase complement(619679..620515) Rhizobium leguminosarum bv. trifolii WSM1325 8022905 YP_002985167.1 CDS Rleg_7200 NC_012858.1 620608 621393 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ret:RHE_PE00432 IclR family transcriptional regulator; IclR family transcriptional regulator complement(620608..621393) Rhizobium leguminosarum bv. trifolii WSM1325 8022906 YP_002985168.1 CDS Rleg_7201 NC_012858.1 621867 622601 D PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_PE00431 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 621867..622601 Rhizobium leguminosarum bv. trifolii WSM1325 8022907 YP_002985169.1 CDS Rleg_7202 NC_012858.1 622691 623968 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rec:RHECIAT_PA0000351 putative racemase protein; Mandelate racemase/muconate lactonizing protein 622691..623968 Rhizobium leguminosarum bv. trifolii WSM1325 8022908 YP_002985170.1 CDS Rleg_7203 NC_012858.1 624213 626792 D PFAM: peptidase C14 caspase catalytic subunit p20; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: ret:RHE_PE00124 hypothetical protein; peptidase C14 caspase catalytic subunit p20 624213..626792 Rhizobium leguminosarum bv. trifolii WSM1325 8022909 YP_002985171.1 CDS Rleg_7204 NC_012858.1 626817 627491 D KEGG: ret:RHE_PE00125 hypothetical protein; hypothetical protein 626817..627491 Rhizobium leguminosarum bv. trifolii WSM1325 8022910 YP_002985172.1 CDS Rleg_7205 NC_012858.1 627675 627809 D hypothetical protein 627675..627809 Rhizobium leguminosarum bv. trifolii WSM1325 8022911 YP_002985173.1 CDS Rleg_7206 NC_012858.1 627821 629431 R KEGG: ret:RHE_PE00126 hypothetical protein; hypothetical protein complement(627821..629431) Rhizobium leguminosarum bv. trifolii WSM1325 8022912 YP_002985174.1 CDS Rleg_7207 NC_012858.1 629692 630282 D hypothetical protein 629692..630282 Rhizobium leguminosarum bv. trifolii WSM1325 8022913 YP_002985175.1 CDS Rleg_7208 NC_012858.1 630575 630952 D KEGG: ret:RHE_PE00128 hypothetical protein; hypothetical protein 630575..630952 Rhizobium leguminosarum bv. trifolii WSM1325 8022914 YP_002985176.1 CDS Rleg_7209 NC_012858.1 631163 633121 D PFAM: OmpA/MotB domain protein; KEGG: ret:RHE_PE00129 hypothetical protein; OmpA/MotB domain protein 631163..633121 Rhizobium leguminosarum bv. trifolii WSM1325 8022915 YP_002985177.1 CDS Rleg_7210 NC_012858.1 633145 634761 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: ret:RHE_PE00130 hypothetical protein; peptidase C14 caspase catalytic subunit p20 633145..634761 Rhizobium leguminosarum bv. trifolii WSM1325 8022916 YP_002985178.1 CDS Rleg_7211 NC_012858.1 634758 637283 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; peptidase C14 caspase catalytic subunit p20; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: ret:RHE_PE00131 serine protease; peptidase S1 and S6 chymotrypsin/Hap 634758..637283 Rhizobium leguminosarum bv. trifolii WSM1325 8022917 YP_002985179.1 CDS Rleg_7212 NC_012858.1 637297 638481 D PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; KEGG: ret:RHE_PE00132 putative serine proteinase inhibitor protein; proteinase inhibitor I4 serpin 637297..638481 Rhizobium leguminosarum bv. trifolii WSM1325 8022918 YP_002985180.1 CDS Rleg_7213 NC_012858.1 638524 640929 D SMART: serine/threonine protein kinase; KEGG: ret:RHE_PE00133 putative serine(threonine) kinase protein; serine/threonine protein kinase 638524..640929 Rhizobium leguminosarum bv. trifolii WSM1325 8022919 YP_002985181.1 CDS Rleg_7214 NC_012858.1 641201 641512 D PFAM: protein of unknown function DUF982; KEGG: ret:RHE_PE00134 hypothetical protein; hypothetical protein 641201..641512 Rhizobium leguminosarum bv. trifolii WSM1325 8022920 YP_002985182.1 CDS Rleg_7215 NC_012858.1 641687 641968 D TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: atc:AGR_C_1484 hypothetical protein; putative addiction module antidote protein, CopG/Arc/MetJ family 641687..641968 Rhizobium leguminosarum bv. trifolii WSM1325 8022921 YP_002985183.1 CDS Rleg_7217 NC_012858.1 642536 643414 R PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: ret:RHE_PE00147 hypothetical protein; FHA domain containing protein complement(642536..643414) Rhizobium leguminosarum bv. trifolii WSM1325 8022923 YP_002985184.1 CDS Rleg_7218 NC_012858.1 643417 644319 R PFAM: type II secretion system protein; KEGG: ret:RHE_PE00148 putative pilus assembly protein; type II secretion system protein complement(643417..644319) Rhizobium leguminosarum bv. trifolii WSM1325 8022924 YP_002985185.1 CDS Rleg_7219 NC_012858.1 644319 645182 R PFAM: type II secretion system protein; KEGG: ret:RHE_PE00149 hypothetical protein; SNP /replace=T; type II secretion system protein complement(644319..645182) Rhizobium leguminosarum bv. trifolii WSM1325 8022925 YP_002985186.1 CDS Rleg_7220 NC_012858.1 645295 647193 R PFAM: type II secretion system protein E; KEGG: ret:RHE_PE00150 putative type II secretion system protein; type II secretion system protein E complement(645295..647193) Rhizobium leguminosarum bv. trifolii WSM1325 8022926 YP_002985187.1 CDS Rleg_7221 NC_012858.1 647214 648170 R TIGRFAM: Flp pilus assembly protein CpaB; KEGG: ret:RHE_PE00151 hypothetical protein; Flp pilus assembly protein CpaB complement(647214..648170) Rhizobium leguminosarum bv. trifolii WSM1325 8022927 YP_002985188.1 CDS Rleg_7222 NC_012858.1 648167 649105 R hypothetical protein complement(648167..649105) Rhizobium leguminosarum bv. trifolii WSM1325 8022928 YP_002985189.1 CDS Rleg_7223 NC_012858.1 649107 649787 R KEGG: ret:RHE_PE00153 hypothetical protein; hypothetical protein complement(649107..649787) Rhizobium leguminosarum bv. trifolii WSM1325 8022929 YP_002985190.1 CDS Rleg_7224 NC_012858.1 649759 651399 R KEGG: ret:RHE_PE00154 hypothetical protein; hypothetical protein complement(649759..651399) Rhizobium leguminosarum bv. trifolii WSM1325 8022930 YP_002985191.1 CDS Rleg_7225 NC_012858.1 651396 652193 R KEGG: ret:RHE_PE00155 hypothetical protein; hypothetical protein complement(651396..652193) Rhizobium leguminosarum bv. trifolii WSM1325 8022931 YP_002985192.1 CDS Rleg_7226 NC_012858.1 652199 652762 R PFAM: peptidase A24A prepilin type IV; KEGG: ret:RHE_PE00156 hypothetical protein; peptidase A24A prepilin type IV complement(652199..652762) Rhizobium leguminosarum bv. trifolii WSM1325 8022932 YP_002985193.1 CDS Rleg_7227 NC_012858.1 652776 652979 R hypothetical protein complement(652776..652979) Rhizobium leguminosarum bv. trifolii WSM1325 8022933 YP_002985194.1 CDS Rleg_7228 NC_012858.1 653488 653619 D hypothetical protein 653488..653619 Rhizobium leguminosarum bv. trifolii WSM1325 8022934 YP_002985195.1 CDS Rleg_7229 NC_012858.1 653619 654761 D PFAM: type II secretion system protein E; KEGG: ret:RHE_PE00157 putative type II secretion system protein; type II secretion system protein E 653619..654761 Rhizobium leguminosarum bv. trifolii WSM1325 8022935 YP_002985196.1 CDS Rleg_7230 NC_012858.1 654892 655437 R PFAM: sarcosine oxidase subunit gamma; KEGG: ret:RHE_PE00427 sarcosine oxidase subunit gamma protein; sarcosine oxidase subunit gamma complement(654892..655437) Rhizobium leguminosarum bv. trifolii WSM1325 8022936 YP_002985197.1 CDS Rleg_7231 NC_012858.1 655430 658387 R TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rec:RHECIAT_PA0000342 sarcosine oxidase protein, alpha subunit; SNP /replace=A; sarcosine oxidase, alpha subunit family complement(655430..658387) Rhizobium leguminosarum bv. trifolii WSM1325 8022937 YP_002985198.1 CDS Rleg_7232 NC_012858.1 658384 658665 R PFAM: sarcosine oxidase subunit delta heterotetrameric; KEGG: rec:RHECIAT_PA0000341 sarcosine oxidase protein, delta subunit; sarcosine oxidase subunit delta heterotetrameric complement(658384..658665) Rhizobium leguminosarum bv. trifolii WSM1325 8022938 YP_002985199.1 CDS Rleg_7233 NC_012858.1 658677 659927 R TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: rec:RHECIAT_PA0000340 sarcosine oxidase protein, beta subunit; SNP /replace=C; SNP /replace=G; sarcosine oxidase, beta subunit family complement(658677..659927) Rhizobium leguminosarum bv. trifolii WSM1325 8022939 YP_002985200.1 CDS Rleg_7234 NC_012858.1 660080 660973 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rec:RHECIAT_PA0000339 putative transcriptional regulator protein, AraC family; SNP /replace=G; SNP /replace=C; AraC family transcriptional regulator 660080..660973 Rhizobium leguminosarum bv. trifolii WSM1325 8022940 Rleg_R0001 tRNA Rleg_R0001 NC_012850.1 95466 95542 D tRNA-Arg 95466..95542 Rhizobium leguminosarum bv. trifolii WSM1325 8011340 Rleg_R0002 tRNA Rleg_R0002 NC_012850.1 171065 171140 R tRNA-Thr complement(171065..171140) Rhizobium leguminosarum bv. trifolii WSM1325 8011403 Rleg_R0003 tRNA Rleg_R0003 NC_012850.1 191679 191752 D tRNA-Gly 191679..191752 Rhizobium leguminosarum bv. trifolii WSM1325 8011421 Rleg_R0004 tRNA Rleg_R0004 NC_012850.1 276934 277008 R tRNA-Thr complement(276934..277008) Rhizobium leguminosarum bv. trifolii WSM1325 8011483 Rleg_R0005 tRNA Rleg_R0005 NC_012850.1 283220 283295 D tRNA-Phe 283220..283295 Rhizobium leguminosarum bv. trifolii WSM1325 8011492 Rleg_R0006 tRNA Rleg_R0006 NC_012850.1 433427 433503 D tRNA-His 433427..433503 Rhizobium leguminosarum bv. trifolii WSM1325 8015440 Rleg_R0007 tRNA Rleg_R0007 NC_012850.1 490944 491017 R tRNA-Gln complement(490944..491017) Rhizobium leguminosarum bv. trifolii WSM1325 8015446 Rleg_R0008 tRNA Rleg_R0008 NC_012850.1 756103 756176 D tRNA-Gln 756103..756176 Rhizobium leguminosarum bv. trifolii WSM1325 8011895 Rleg_R0009 tRNA Rleg_R0009 NC_012850.1 769717 769793 D tRNA-Pro 769717..769793 Rhizobium leguminosarum bv. trifolii WSM1325 8011908 Rleg_R0010 tRNA Rleg_R0010 NC_012850.1 1117785 1117875 D tRNA-Ser 1117785..1117875 Rhizobium leguminosarum bv. trifolii WSM1325 8012257 Rleg_R0011 tRNA Rleg_R0011 NC_012850.1 1280181 1280257 D tRNA-Pro 1280181..1280257 Rhizobium leguminosarum bv. trifolii WSM1325 8012397 Rleg_R0012 tRNA Rleg_R0012 NC_012850.1 1333988 1334063 R tRNA-Val complement(1333988..1334063) Rhizobium leguminosarum bv. trifolii WSM1325 8012447 Rleg_R0013 tRNA Rleg_R0013 NC_012850.1 1334467 1334543 D tRNA-Asp 1334467..1334543 Rhizobium leguminosarum bv. trifolii WSM1325 8015551 Rleg_R0014 tRNA Rleg_R0014 NC_012850.1 1334628 1334704 D tRNA-Asp 1334628..1334704 Rhizobium leguminosarum bv. trifolii WSM1325 8012448 Rleg_R0015 tRNA Rleg_R0015 NC_012850.1 1404701 1404776 D tRNA-Thr 1404701..1404776 Rhizobium leguminosarum bv. trifolii WSM1325 8012498 Rleg_R0016 tRNA Rleg_R0016 NC_012850.1 1407823 1407907 D tRNA-Tyr 1407823..1407907 Rhizobium leguminosarum bv. trifolii WSM1325 8012504 Rleg_R0017 tRNA Rleg_R0017 NC_012850.1 1407933 1408006 D tRNA-Gly 1407933..1408006 Rhizobium leguminosarum bv. trifolii WSM1325 8012505 Rleg_R0018 tRNA Rleg_R0018 NC_012850.1 1411100 1411175 D tRNA-Trp 1411100..1411175 Rhizobium leguminosarum bv. trifolii WSM1325 8012509 Rleg_R0019 tRNA Rleg_R0019 NC_012850.1 1587100 1587184 D tRNA-Leu 1587100..1587184 Rhizobium leguminosarum bv. trifolii WSM1325 8012669 Rleg_R0020 tRNA Rleg_R0020 NC_012850.1 1659517 1659591 R tRNA-Asn complement(1659517..1659591) Rhizobium leguminosarum bv. trifolii WSM1325 8012733 Rleg_R0021 tRNA Rleg_R0021 NC_012850.1 1661044 1661117 D tRNA-Cys 1661044..1661117 Rhizobium leguminosarum bv. trifolii WSM1325 8012737 Rleg_R0022 tRNA Rleg_R0022 NC_012850.1 1699326 1699410 D tRNA-Leu 1699326..1699410 Rhizobium leguminosarum bv. trifolii WSM1325 8012769 Rleg_R0023 tRNA Rleg_R0023 NC_012850.1 1735726 1735800 R tRNA-Glu complement(1735726..1735800) Rhizobium leguminosarum bv. trifolii WSM1325 8012803 Rleg_R0024 tRNA Rleg_R0024 NC_012850.1 1736046 1736120 R tRNA-Glu complement(1736046..1736120) Rhizobium leguminosarum bv. trifolii WSM1325 8012804 Rleg_R0025 tRNA Rleg_R0025 NC_012850.1 1736195 1736269 R tRNA-Glu complement(1736195..1736269) Rhizobium leguminosarum bv. trifolii WSM1325 8012805 Rleg_R0026 tRNA Rleg_R0026 NC_012850.1 1739480 1739556 R tRNA-Pro complement(1739480..1739556) Rhizobium leguminosarum bv. trifolii WSM1325 8012810 Rleg_R0027 tRNA Rleg_R0027 NC_012850.1 1740545 1740621 D tRNA-Arg 1740545..1740621 Rhizobium leguminosarum bv. trifolii WSM1325 8012812 Rleg_R0028 tRNA Rleg_R0028 NC_012850.1 1832428 1832503 D tRNA-Lys 1832428..1832503 Rhizobium leguminosarum bv. trifolii WSM1325 8012896 Rleg_R0029 tRNA Rleg_R0029 NC_012850.1 1996670 1996759 D tRNA-Ser 1996670..1996759 Rhizobium leguminosarum bv. trifolii WSM1325 8013035 Rleg_R0030 tRNA Rleg_R0030 NC_012850.1 2066823 2066907 D tRNA-Leu 2066823..2066907 Rhizobium leguminosarum bv. trifolii WSM1325 8015638 Rleg_R0031 tRNA Rleg_R0031 NC_012850.1 2715206 2715281 R tRNA-Lys complement(2715206..2715281) Rhizobium leguminosarum bv. trifolii WSM1325 8013677 Rleg_R0033 tRNA Rleg_R0033 NC_012850.1 2927665 2927740 D tRNA-Met 2927665..2927740 Rhizobium leguminosarum bv. trifolii WSM1325 8013858 Rleg_R0034 tRNA Rleg_R0034 NC_012850.1 3190663 3190739 D tRNA-Arg 3190663..3190739 Rhizobium leguminosarum bv. trifolii WSM1325 8014084 Rleg_R0035 tRNA Rleg_R0035 NC_012850.1 3460349 3460425 R tRNA-Met complement(3460349..3460425) Rhizobium leguminosarum bv. trifolii WSM1325 8014309 Rleg_R0038 tRNA Rleg_R0038 NC_012850.1 3464345 3464420 R tRNA-Ala complement(3464345..3464420) Rhizobium leguminosarum bv. trifolii WSM1325 8014310 Rleg_R0039 tRNA Rleg_R0039 NC_012850.1 3464514 3464590 R tRNA-Ile complement(3464514..3464590) Rhizobium leguminosarum bv. trifolii WSM1325 8014311 Rleg_R0041 tRNA Rleg_R0041 NC_012850.1 3515324 3515400 R tRNA-Met complement(3515324..3515400) Rhizobium leguminosarum bv. trifolii WSM1325 8014353 Rleg_R0043 tRNA Rleg_R0043 NC_012850.1 3665179 3665253 D tRNA-Val 3665179..3665253 Rhizobium leguminosarum bv. trifolii WSM1325 8014475 Rleg_R0044 tRNA Rleg_R0044 NC_012850.1 3875292 3875368 R tRNA-Met complement(3875292..3875368) Rhizobium leguminosarum bv. trifolii WSM1325 8014636 Rleg_R0047 tRNA Rleg_R0047 NC_012850.1 3879210 3879285 R tRNA-Ala complement(3879210..3879285) Rhizobium leguminosarum bv. trifolii WSM1325 8014639 Rleg_R0048 tRNA Rleg_R0048 NC_012850.1 3879379 3879455 R tRNA-Ile complement(3879379..3879455) Rhizobium leguminosarum bv. trifolii WSM1325 8014640 Rleg_R0050 tRNA Rleg_R0050 NC_012850.1 3913223 3913307 D tRNA-Leu 3913223..3913307 Rhizobium leguminosarum bv. trifolii WSM1325 8014664 Rleg_R0051 tRNA Rleg_R0051 NC_012850.1 3966569 3966645 D tRNA-Arg 3966569..3966645 Rhizobium leguminosarum bv. trifolii WSM1325 8014718 Rleg_R0052 tRNA Rleg_R0052 NC_012850.1 4174043 4174117 D tRNA-Gly 4174043..4174117 Rhizobium leguminosarum bv. trifolii WSM1325 8014899 Rleg_R0053 tRNA Rleg_R0053 NC_012850.1 4288969 4289058 R tRNA-Ser complement(4288969..4289058) Rhizobium leguminosarum bv. trifolii WSM1325 8014981 Rleg_R0055 tRNA Rleg_R0055 NC_012850.1 4430841 4430917 D tRNA-Ile 4430841..4430917 Rhizobium leguminosarum bv. trifolii WSM1325 8015097 Rleg_R0056 tRNA Rleg_R0056 NC_012850.1 4431011 4431086 D tRNA-Ala 4431011..4431086 Rhizobium leguminosarum bv. trifolii WSM1325 8015914 Rleg_R0059 tRNA Rleg_R0059 NC_012850.1 4434928 4435004 D tRNA-Met 4434928..4435004 Rhizobium leguminosarum bv. trifolii WSM1325 8015100 Rleg_R0060 tRNA Rleg_R0060 NC_012850.1 4492692 4492767 D tRNA-Ala 4492692..4492767 Rhizobium leguminosarum bv. trifolii WSM1325 8015137 Rleg_R0062 tRNA Rleg_R0062 NC_012850.1 4590175 4590264 R tRNA-Ser complement(4590175..4590264) Rhizobium leguminosarum bv. trifolii WSM1325 8015222 Rleg_R0063 tRNA Rleg_R0063 NC_012850.1 4646570 4646656 R tRNA-Leu complement(4646570..4646656) Rhizobium leguminosarum bv. trifolii WSM1325 8015272 Rleg_R0036 rRNA Rleg_R0036 NC_012850.1 3460633 3460746 R 5S ribosomal RNA complement(3460633..3460746) Rhizobium leguminosarum bv. trifolii WSM1325 8015799 Rleg_R0037 rRNA Rleg_R0037 NC_012850.1 3460933 3463834 R 23S ribosomal RNA complement(3460933..3463834) Rhizobium leguminosarum bv. trifolii WSM1325 8015800 Rleg_R0040 rRNA Rleg_R0040 NC_012850.1 3464935 3466403 R 16S ribosomal RNA complement(3464935..3466403) Rhizobium leguminosarum bv. trifolii WSM1325 8015801 Rleg_R0045 rRNA Rleg_R0045 NC_012850.1 3875498 3875611 R 5S ribosomal RNA complement(3875498..3875611) Rhizobium leguminosarum bv. trifolii WSM1325 8014637 Rleg_R0046 rRNA Rleg_R0046 NC_012850.1 3875798 3878699 R 23S ribosomal RNA complement(3875798..3878699) Rhizobium leguminosarum bv. trifolii WSM1325 8014638 Rleg_R0049 rRNA Rleg_R0049 NC_012850.1 3879800 3881268 R 16S ribosomal RNA complement(3879800..3881268) Rhizobium leguminosarum bv. trifolii WSM1325 8015855 Rleg_R0054 rRNA Rleg_R0054 NC_012850.1 4429028 4430496 D 16S ribosomal RNA 4429028..4430496 Rhizobium leguminosarum bv. trifolii WSM1325 8015096 Rleg_R0057 rRNA Rleg_R0057 NC_012850.1 4431597 4434498 D 23S ribosomal RNA 4431597..4434498 Rhizobium leguminosarum bv. trifolii WSM1325 8015098 Rleg_R0058 rRNA Rleg_R0058 NC_012850.1 4434685 4434798 D 5S ribosomal RNA 4434685..4434798 Rhizobium leguminosarum bv. trifolii WSM1325 8015099