-- dump date 20120504_160144 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001041782.1 126464806 4894980 complement(70..4755) 1 NC_009040.1 KEGG: mag:amb3790 large exoprotein involved in heme utilization or adhesion; large exoprotein involved in heme utilization or adhesion 4755 4894980 Rsph17029_4068 Rhodobacter sphaeroides ATCC 17029 large exoprotein involved in heme utilization or adhesion YP_001041782.1 70 R 349101 CDS YP_001041783.1 126464807 4895024 5009..6781 1 NC_009040.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: neu:NE2092 glycosyl transferase group 1:TPR repeat; TPR repeat-containing protein 6781 4895024 Rsph17029_4069 Rhodobacter sphaeroides ATCC 17029 TPR repeat-containing protein YP_001041783.1 5009 D 349101 CDS YP_001041784.1 126464808 4895059 6898..9072 1 NC_009040.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH01377 probable toxin secretion ABC transporter, ATP-binding protein; ABC transporter related 9072 4895059 Rsph17029_4070 Rhodobacter sphaeroides ATCC 17029 ABC transporter related YP_001041784.1 6898 D 349101 CDS YP_001041785.1 126464809 4895003 9069..10367 1 NC_009040.1 PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH01378 probable protein secretion protein, HlyD family; secretion protein HlyD family protein 10367 4895003 Rsph17029_4071 Rhodobacter sphaeroides ATCC 17029 secretion protein HlyD family protein YP_001041785.1 9069 D 349101 CDS YP_001041786.1 126464810 4895020 10391..10984 1 NC_009040.1 PFAM: Methyltransferase type 11; KEGG: dar:Daro_0786 TPR repeat:tetratricopeptide TPR_4; methyltransferase type 11 10984 4895020 Rsph17029_4072 Rhodobacter sphaeroides ATCC 17029 methyltransferase type 11 YP_001041786.1 10391 D 349101 CDS YP_001041787.1 126464811 4894991 complement(11118..11954) 1 NC_009040.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 11954 4894991 Rsph17029_4073 Rhodobacter sphaeroides ATCC 17029 2-dehydro-3-deoxyphosphooctonate aldolase YP_001041787.1 11118 R 349101 CDS YP_001041788.1 126464812 4895022 12156..12881 1 NC_009040.1 KEGG: rsp:RSP_3538 hypothetical protein; hypothetical protein 12881 4895022 Rsph17029_4074 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041788.1 12156 D 349101 CDS YP_001041789.1 126464813 4895035 13248..14030 1 NC_009040.1 PFAM: sulfotransferase; KEGG: sye:Syncc9902_0128 hypothetical protein; sulfotransferase 14030 4895035 Rsph17029_4075 Rhodobacter sphaeroides ATCC 17029 sulfotransferase YP_001041789.1 13248 D 349101 CDS YP_001041790.1 126464814 4894992 complement(14005..14895) 1 NC_009040.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pde:Pden_2119 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 14895 4894992 Rsph17029_4076 Rhodobacter sphaeroides ATCC 17029 glucose-1-phosphate thymidylyltransferase YP_001041790.1 14005 R 349101 CDS YP_001041791.1 126464815 4894971 complement(14892..15743) 1 NC_009040.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pde:Pden_2120 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 15743 4894971 Rsph17029_4077 Rhodobacter sphaeroides ATCC 17029 dTDP-4-dehydrorhamnose reductase YP_001041791.1 14892 R 349101 CDS YP_001041792.1 126464816 4894996 complement(15740..16780) 1 NC_009040.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rde:RD1_B0019 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 16780 4894996 Rsph17029_4078 Rhodobacter sphaeroides ATCC 17029 dTDP-glucose 4,6-dehydratase YP_001041792.1 15740 R 349101 CDS YP_001041793.1 126464817 4894972 complement(16784..17347) 1 NC_009040.1 KEGG: sit:TM1040_3863 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 17347 4894972 Rsph17029_4079 Rhodobacter sphaeroides ATCC 17029 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001041793.1 16784 R 349101 CDS YP_001041794.1 126464818 4894986 complement(17411..18349) 1 NC_009040.1 PFAM: glycosyl transferase, family 2; KEGG: net:Neut_0166 glycosyl transferase, family 2; glycosyl transferase family protein 18349 4894986 Rsph17029_4080 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001041794.1 17411 R 349101 CDS YP_001041795.1 126464819 4895007 complement(18401..19363) 1 NC_009040.1 KEGG: jan:Jann_4266 RepA; hypothetical protein 19363 4895007 Rsph17029_4081 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041795.1 18401 R 349101 CDS YP_001041796.1 126464820 4895060 20057..21511 1 NC_009040.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sit:TM1040_3773 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 21511 4895060 Rsph17029_4082 Rhodobacter sphaeroides ATCC 17029 cobyrinic acid a,c-diamide synthase YP_001041796.1 20057 D 349101 CDS YP_001041797.1 126464821 4895025 21636..22742 1 NC_009040.1 PFAM: ParB domain protein nuclease; KEGG: rde:RD1_B0047 chromosome partitioning protein, putative; nuclease 22742 4895025 Rsph17029_4083 Rhodobacter sphaeroides ATCC 17029 nuclease YP_001041797.1 21636 D 349101 CDS YP_001041798.1 126464822 4894997 complement(23042..23851) 1 NC_009040.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_2127 ABC transporter related; ABC transporter related 23851 4894997 Rsph17029_4084 Rhodobacter sphaeroides ATCC 17029 ABC transporter related YP_001041798.1 23042 R 349101 CDS YP_001041799.1 126464823 4895028 complement(23868..25007) 1 NC_009040.1 KEGG: pde:Pden_5038 capsule polysaccharide export protein-like; capsule polysaccharide export protein-like 25007 4895028 Rsph17029_4085 Rhodobacter sphaeroides ATCC 17029 capsule polysaccharide export protein-like YP_001041799.1 23868 R 349101 CDS YP_001041800.1 126464824 4895030 25721..26521 1 NC_009040.1 PFAM: ABC-2 type transporter; KEGG: pde:Pden_5039 ABC-2 type transporter; ABC-2 type transporter 26521 4895030 Rsph17029_4086 Rhodobacter sphaeroides ATCC 17029 ABC-2 type transporter YP_001041800.1 25721 D 349101 CDS YP_001041801.1 126464825 4895017 26585..28840 1 NC_009040.1 KEGG: ccr:CC0633 polysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein-like 28840 4895017 Rsph17029_4087 Rhodobacter sphaeroides ATCC 17029 lipopolysaccharide biosynthesis protein-like YP_001041801.1 26585 D 349101 CDS YP_001041802.1 126464826 4895029 28841..29833 1 NC_009040.1 hypothetical protein 29833 4895029 Rsph17029_4088 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041802.1 28841 D 349101 CDS YP_001041803.1 126464827 4895000 complement(29991..31349) 1 NC_009040.1 KEGG: rsp:RSP_3985 hypothetical protein; hypothetical protein 31349 4895000 Rsph17029_4089 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041803.1 29991 R 349101 CDS YP_001041804.1 126464828 4894990 31952..33253 1 NC_009040.1 KEGG: mes:Meso_2767 hypothetical protein; hypothetical protein 33253 4894990 Rsph17029_4090 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041804.1 31952 D 349101 CDS YP_001041805.1 126464829 4894977 33435..34376 1 NC_009040.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sil:SPO2401 type I secretion target repeat protein; hemolysin-type calcium-binding region 34376 4894977 Rsph17029_4091 Rhodobacter sphaeroides ATCC 17029 hemolysin-type calcium-binding region YP_001041805.1 33435 D 349101 CDS YP_001041806.1 126464830 4894976 34492..35799 1 NC_009040.1 hypothetical protein 35799 4894976 Rsph17029_4092 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041806.1 34492 D 349101 CDS YP_001041807.1 126464831 4895018 35889..36578 1 NC_009040.1 KEGG: sye:Syncc9902_2034 TPR repeat; hypothetical protein 36578 4895018 Rsph17029_4093 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041807.1 35889 D 349101 CDS YP_001041808.1 126464832 4894943 complement(36611..37705) 1 NC_009040.1 KEGG: pde:Pden_5028 hypothetical protein; hypothetical protein 37705 4894943 Rsph17029_4094 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041808.1 36611 R 349101 CDS YP_001041809.1 126464833 4895012 complement(37733..38737) 1 NC_009040.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: jan:Jann_0077 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 38737 4895012 Rsph17029_4095 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001041809.1 37733 R 349101 CDS YP_001041810.1 126464834 4894962 complement(39021..39416) 1 NC_009040.1 hypothetical protein 39416 4894962 Rsph17029_4096 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041810.1 39021 R 349101 CDS YP_001041811.1 126464835 4894994 40664..42058 1 NC_009040.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 42058 4894994 Rsph17029_4097 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit beta YP_001041811.1 40664 D 349101 CDS YP_001041812.1 126464836 4895023 42055..42495 1 NC_009040.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 42495 4895023 Rsph17029_4098 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit epsilon YP_001041812.1 42055 D 349101 CDS YP_001041813.1 126464837 4895011 42492..42857 1 NC_009040.1 KEGG: bma:BMAA0124.1 ATP synthase gene 1, putative; ATP synthase gene 1, putative 42857 4895011 Rsph17029_4099 Rhodobacter sphaeroides ATCC 17029 ATP synthase gene 1, putative YP_001041813.1 42492 D 349101 CDS YP_001041814.1 126464838 4895033 43111..43794 1 NC_009040.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 43794 4895033 Rsph17029_4100 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit A YP_001041814.1 43111 D 349101 CDS YP_001041815.1 126464839 4894984 43791..44042 1 NC_009040.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 44042 4894984 Rsph17029_4101 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit C YP_001041815.1 43791 D 349101 CDS YP_001041816.1 126464840 4894973 44048..44752 1 NC_009040.1 PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: bxe:Bxe_C0044 H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase, B/B' subunit 44752 4894973 Rsph17029_4102 Rhodobacter sphaeroides ATCC 17029 H+-transporting two-sector ATPase, B/B' subunit YP_001041816.1 44048 D 349101 CDS YP_001041817.1 126464841 4895039 44742..46235 1 NC_009040.1 KEGG: bxe:Bxe_A1885 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; ATP synthase F1, alpha subunit 46235 4895039 Rsph17029_4103 Rhodobacter sphaeroides ATCC 17029 ATP synthase F1, alpha subunit YP_001041817.1 44742 D 349101 CDS YP_001041818.1 126464842 4895034 46232..47083 1 NC_009040.1 PFAM: H+-transporting two-sector ATPase, gamma subunit; KEGG: bte:BTH_II0427 ATP synthase F1, gamma subunit; H+-transporting two-sector ATPase, gamma subunit 47083 4895034 Rsph17029_4104 Rhodobacter sphaeroides ATCC 17029 H+-transporting two-sector ATPase, gamma subunit YP_001041818.1 46232 D 349101 CDS YP_001041819.1 126464843 4894959 48881..49420 1 NC_009040.1 KEGG: pde:Pden_2404 hypothetical protein; hypothetical protein 49420 4894959 Rsph17029_4108 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041819.1 48881 D 349101 CDS YP_001041820.1 126464844 4895056 50642..50866 1 NC_009040.1 KEGG: sil:SPOA0122 ISSpo9, transposase; ISSpo9, transposase 50866 4895056 Rsph17029_4109 Rhodobacter sphaeroides ATCC 17029 ISSpo9, transposase YP_001041820.1 50642 D 349101 CDS YP_001041821.1 126464845 4894958 51036..51551 1 NC_009040.1 hypothetical protein 51551 4894958 Rsph17029_4110 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041821.1 51036 D 349101 CDS YP_001041822.1 126464846 4894949 51665..56728 1 NC_009040.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: hch:HCH_02073 rhs family protein; YD repeat-containing protein 56728 4894949 Rsph17029_4111 Rhodobacter sphaeroides ATCC 17029 YD repeat-containing protein YP_001041822.1 51665 D 349101 CDS YP_001041823.1 126464847 4895036 57529..58053 1 NC_009040.1 hypothetical protein 58053 4895036 Rsph17029_4113 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041823.1 57529 D 349101 CDS YP_001041824.1 126464848 4894983 complement(58040..58450) 1 NC_009040.1 KEGG: bur:Bcep18194_B2403 hypothetical protein; hypothetical protein 58450 4894983 Rsph17029_4114 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041824.1 58040 R 349101 CDS YP_001041825.1 126464849 4894948 complement(58480..58878) 1 NC_009040.1 hypothetical protein 58878 4894948 Rsph17029_4115 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041825.1 58480 R 349101 CDS YP_001041826.1 126464850 4894960 59035..59835 1 NC_009040.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; KEGG: bch:Bcen2424_3705 transcriptional regulator, AraC family; AraC family transcriptional regulator 59835 4894960 Rsph17029_4116 Rhodobacter sphaeroides ATCC 17029 AraC family transcriptional regulator YP_001041826.1 59035 D 349101 CDS YP_001041827.1 126464851 4894944 complement(59960..60382) 1 NC_009040.1 PFAM: regulatory protein, MerR; KEGG: sil:SPOA0389 transcriptional regulator, MerR family; MerR family transcriptional regulator 60382 4894944 Rsph17029_4117 Rhodobacter sphaeroides ATCC 17029 MerR family transcriptional regulator YP_001041827.1 59960 R 349101 CDS YP_001041828.1 126464852 4895016 60580..61557 1 NC_009040.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: hne:HNE_0549 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 61557 4895016 Rsph17029_4118 Rhodobacter sphaeroides ATCC 17029 cation diffusion facilitator family transporter YP_001041828.1 60580 D 349101 CDS YP_001041829.1 126464853 4894970 61892..62389 1 NC_009040.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pde:Pden_1629 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 62389 4894970 Rsph17029_4119 Rhodobacter sphaeroides ATCC 17029 ECF subfamily RNA polymerase sigma-24 factor YP_001041829.1 61892 D 349101 CDS YP_001041830.1 126464854 4895002 62386..63360 1 NC_009040.1 PFAM: FecR protein; KEGG: pen:PSEEN4566 FecR-like transmembrane sensor; putative FecR 63360 4895002 Rsph17029_4120 Rhodobacter sphaeroides ATCC 17029 putative FecR YP_001041830.1 62386 D 349101 CDS YP_001041831.1 126464855 4894950 63491..65866 1 NC_009040.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE1097 TonB-dependent receptor protein; TonB-dependent siderophore receptor 65866 4894950 Rsph17029_4121 Rhodobacter sphaeroides ATCC 17029 TonB-dependent siderophore receptor YP_001041831.1 63491 D 349101 CDS YP_001041832.1 126464856 4895051 65909..66772 1 NC_009040.1 PFAM: periplasmic binding protein; KEGG: aha:AHA_4278 ferrichrome-binding periplasmic protein; periplasmic binding protein 66772 4895051 Rsph17029_4122 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein YP_001041832.1 65909 D 349101 CDS YP_001041833.1 126464857 4895013 66776..68713 1 NC_009040.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 68713 4895013 Rsph17029_4123 Rhodobacter sphaeroides ATCC 17029 iron-hydroxamate transporter permease subunit YP_001041833.1 66776 D 349101 CDS YP_001041834.1 126464858 4895006 68710..69585 1 NC_009040.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ecj:JW0147 iron-hydroxamate transporter subunit; ABC transporter related 69585 4895006 Rsph17029_4124 Rhodobacter sphaeroides ATCC 17029 ABC transporter related YP_001041834.1 68710 D 349101 CDS YP_001041835.1 126464859 4895038 70091..70480 1 NC_009040.1 TIGRFAM: uncharacterized domain 1; KEGG: pde:Pden_1441 hypothetical protein; hypothetical protein 70480 4895038 Rsph17029_4126 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041835.1 70091 D 349101 CDS YP_001041836.1 126464860 4895040 complement(71982..72722) 1 NC_009040.1 PFAM: protein of unknown function DUF81; KEGG: pde:Pden_1465 hypothetical protein; hypothetical protein 72722 4895040 Rsph17029_4130 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041836.1 71982 R 349101 CDS YP_001041837.1 126464861 4895041 complement(73061..73582) 1 NC_009040.1 hypothetical protein 73582 4895041 Rsph17029_4132 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041837.1 73061 R 349101 CDS YP_001041838.1 126464862 4894978 complement(73579..74211) 1 NC_009040.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pde:Pden_1467 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 74211 4894978 Rsph17029_4133 Rhodobacter sphaeroides ATCC 17029 lysine exporter protein LysE/YggA YP_001041838.1 73579 R 349101 CDS YP_001041839.1 126464863 4894995 complement(74214..74759) 1 NC_009040.1 PFAM: protein of unknown function DUF1234; KEGG: pde:Pden_1468 protein of unknown function DUF1234; hypothetical protein 74759 4894995 Rsph17029_4134 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041839.1 74214 R 349101 CDS YP_001041840.1 126464864 4894947 74874..75053 1 NC_009040.1 KEGG: pde:Pden_1469 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 75053 4894947 Rsph17029_4135 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001041840.1 74874 D 349101 CDS YP_001041841.1 126464865 4895005 complement(75056..75844) 1 NC_009040.1 PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_1566 alpha/beta hydrolase fold; alpha/beta hydrolase fold 75844 4895005 Rsph17029_4136 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase fold YP_001041841.1 75056 R 349101 CDS YP_001041842.1 126464866 4895047 75929..76345 1 NC_009040.1 PFAM: regulatory protein, MerR; KEGG: rpa:RPA4825 transcriptional regulator, MerR family; MerR family transcriptional regulator 76345 4895047 Rsph17029_4137 Rhodobacter sphaeroides ATCC 17029 MerR family transcriptional regulator YP_001041842.1 75929 D 349101 CDS YP_001041843.1 126464867 4894946 complement(76342..76836) 1 NC_009040.1 KEGG: rsp:RSP_4150 hypothetical protein; hypothetical protein 76836 4894946 Rsph17029_4138 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041843.1 76342 R 349101 CDS YP_001041844.1 126464868 4895042 complement(77169..78086) 1 NC_009040.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pfo:Pfl_1318 transcriptional regulator, LysR family; LysR family transcriptional regulator 78086 4895042 Rsph17029_4140 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001041844.1 77169 R 349101 CDS YP_001041845.1 126464869 4895021 78171..78641 1 NC_009040.1 PFAM: protein of unknown function DUF606; KEGG: bur:Bcep18194_B1974 protein of unknown function DUF606; hypothetical protein 78641 4895021 Rsph17029_4141 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041845.1 78171 D 349101 CDS YP_001041846.1 126464870 4894982 complement(78760..79605) 1 NC_009040.1 PFAM: UspA domain protein; KEGG: mes:Meso_0781 UspA; UspA domain-containing protein 79605 4894982 Rsph17029_4142 Rhodobacter sphaeroides ATCC 17029 UspA domain-containing protein YP_001041846.1 78760 R 349101 CDS YP_001041847.1 126464871 4894956 complement(79619..81109) 1 NC_009040.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rsp:RSP_4197 antisigma-factor antagonist, STAS; sulphate transporter 81109 4894956 Rsph17029_4143 Rhodobacter sphaeroides ATCC 17029 sulphate transporter YP_001041847.1 79619 R 349101 CDS YP_001041848.1 126464872 4895015 complement(81449..82384) 1 NC_009040.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eba:ebA6709 putative mechanosensitive channel protein; MscS mechanosensitive ion channel 82384 4895015 Rsph17029_4144 Rhodobacter sphaeroides ATCC 17029 MscS mechanosensitive ion channel YP_001041848.1 81449 R 349101 CDS YP_001041849.1 126464873 4895008 complement(82600..83013) 1 NC_009040.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 83013 4895008 Rsph17029_4145 Rhodobacter sphaeroides ATCC 17029 nucleoside diphosphate kinase regulator YP_001041849.1 82600 R 349101 CDS YP_001041850.1 126464874 4895014 complement(84029..84760) 1 NC_009040.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sma:SAV6021 GntR-family transcriptional regulator; GntR family transcriptional regulator 84760 4895014 Rsph17029_4146 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001041850.1 84029 R 349101 CDS YP_001041851.1 126464875 4894952 84900..86456 1 NC_009040.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rfr:Rfer_0985 extracellular solute-binding protein, family 5; extracellular solute-binding protein 86456 4894952 Rsph17029_4147 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001041851.1 84900 D 349101 CDS YP_001041852.1 126464876 4894979 86537..87490 1 NC_009040.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0984 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 87490 4894979 Rsph17029_4148 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001041852.1 86537 D 349101 CDS YP_001041853.1 126464877 4894957 87480..88385 1 NC_009040.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0983 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 88385 4894957 Rsph17029_4149 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001041853.1 87480 D 349101 CDS YP_001041854.1 126464878 4894975 88397..89107 1 NC_009040.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PE00431 probable oxidoreductase protein, short-chain-dehydrogenase (SDR) superfamily; short-chain dehydrogenase/reductase SDR 89107 4894975 Rsph17029_4150 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001041854.1 88397 D 349101 CDS YP_001041855.1 126464879 4895043 complement(89633..90379) 1 NC_009040.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sil:SPO2413 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 90379 4895043 Rsph17029_4152 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001041855.1 89633 R 349101 CDS YP_001041856.1 126464880 4894951 complement(90401..91582) 1 NC_009040.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: mes:Meso_1946 mandelate racemase/muconate lactonizing enzyme-like; mandelate racemase/muconate lactonizing protein 91582 4894951 Rsph17029_4153 Rhodobacter sphaeroides ATCC 17029 mandelate racemase/muconate lactonizing protein YP_001041856.1 90401 R 349101 CDS YP_001041857.1 126464881 4895044 91688..92728 1 NC_009040.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sme:SMb20435 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 92728 4895044 Rsph17029_4154 Rhodobacter sphaeroides ATCC 17029 succinylglutamate desuccinylase/aspartoacylase YP_001041857.1 91688 D 349101 CDS YP_001041858.1 126464882 4895037 92746..94242 1 NC_009040.1 PFAM: Uncharacterised conserved protein UCP012702; MlrC domain protein; KEGG: bch:Bcen2424_6086 MlrC domain protein; MlrC domain-containing protein 94242 4895037 Rsph17029_4155 Rhodobacter sphaeroides ATCC 17029 MlrC domain-containing protein YP_001041858.1 92746 D 349101 CDS YP_001041859.1 126464883 4895027 94244..95419 1 NC_009040.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bbr:BB4687 putative mandelate racemase; mandelate racemase/muconate lactonizing protein 95419 4895027 Rsph17029_4156 Rhodobacter sphaeroides ATCC 17029 mandelate racemase/muconate lactonizing protein YP_001041859.1 94244 D 349101 CDS YP_001041860.1 126464884 4895026 95469..96485 1 NC_009040.1 KEGG: jan:Jann_4131 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter, ATPase subunit 96485 4895026 Rsph17029_4157 Rhodobacter sphaeroides ATCC 17029 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001041860.1 95469 D 349101 CDS YP_001041861.1 126464885 4895049 96485..97513 1 NC_009040.1 KEGG: rme:Rmet_5092 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter, ATPase subunit 97513 4895049 Rsph17029_4158 Rhodobacter sphaeroides ATCC 17029 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001041861.1 96485 D 349101 CDS YP_001041862.1 126464886 4894965 complement(97796..98584) 1 NC_009040.1 PFAM: protein of unknown function DUF1217; KEGG: sil:SPO3456 flagellar protein, putative; hypothetical protein 98584 4894965 Rsph17029_4159 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041862.1 97796 R 349101 CDS YP_001041863.1 126464887 4894968 complement(98581..98988) 1 NC_009040.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 98988 flbT 4894968 flbT Rhodobacter sphaeroides ATCC 17029 flagellar biosynthesis repressor FlbT YP_001041863.1 98581 R 349101 CDS YP_001041864.1 126464888 4894967 complement(98985..99350) 1 NC_009040.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar biosynthesis regulatory protein FlaF 99350 flaF 4894967 flaF Rhodobacter sphaeroides ATCC 17029 flagellar biosynthesis regulatory protein FlaF YP_001041864.1 98985 R 349101 CDS YP_001041865.1 126464889 4895010 complement(99440..100285) 1 NC_009040.1 PFAM: flagellin domain protein; KEGG: pde:Pden_1620 flagellin domain protein; flagellin domain-containing protein 100285 4895010 Rsph17029_4162 Rhodobacter sphaeroides ATCC 17029 flagellin domain-containing protein YP_001041865.1 99440 R 349101 CDS YP_001041866.1 126464890 4894969 100694..101554 1 NC_009040.1 hypothetical protein 101554 4894969 Rsph17029_4163 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041866.1 100694 D 349101 CDS YP_001041867.1 126464891 4894954 complement(101594..102343) 1 NC_009040.1 PFAM: protein of unknown function DUF81; KEGG: ade:Adeh_2178 protein of unknown function DUF81; hypothetical protein 102343 4894954 Rsph17029_4164 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041867.1 101594 R 349101 CDS YP_001041868.1 126464892 4894985 102540..103238 1 NC_009040.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sit:TM1040_0365 GntR-like; GntR domain-containing protein 103238 4894985 Rsph17029_4165 Rhodobacter sphaeroides ATCC 17029 GntR domain-containing protein YP_001041868.1 102540 D 349101 CDS YP_001041869.1 126464893 4894999 103346..104134 1 NC_009040.1 TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: mag:amb2949 molybdenum-pterin binding protein MopA; ModE family transcriptional regulator 104134 4894999 Rsph17029_4166 Rhodobacter sphaeroides ATCC 17029 ModE family transcriptional regulator YP_001041869.1 103346 D 349101 CDS YP_001041870.1 126464894 4894981 104175..105008 1 NC_009040.1 KEGG: rpa:RPA1002 putative molybdenum transport system protein; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; modD protein 105008 4894981 Rsph17029_4167 Rhodobacter sphaeroides ATCC 17029 modD protein YP_001041870.1 104175 D 349101 CDS YP_001041871.1 126464895 4895001 105348..105551 1 NC_009040.1 PFAM: TOBE domain protein; KEGG: pde:Pden_1172 TOBE domain protein; TOBE domain-containing protein 105551 4895001 Rsph17029_4168 Rhodobacter sphaeroides ATCC 17029 TOBE domain-containing protein YP_001041871.1 105348 D 349101 CDS YP_001041872.1 126464896 4894998 106096..106872 1 NC_009040.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMc03196 putative molybdate-binding periplasmic ABC transporter protein; molybdenum ABC transporter, periplasmic molybdate-binding protein 106872 4894998 Rsph17029_4169 Rhodobacter sphaeroides ATCC 17029 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001041872.1 106096 D 349101 CDS YP_001041873.1 126464897 4894989 106872..107570 1 NC_009040.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease protein 107570 modB 4894989 modB Rhodobacter sphaeroides ATCC 17029 molybdate ABC transporter permease protein YP_001041873.1 106872 D 349101 CDS YP_001041874.1 126464898 4894966 107567..108673 1 NC_009040.1 KEGG: sil:SPO0697 molybdate ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter, ATPase subunit 108673 4894966 Rsph17029_4171 Rhodobacter sphaeroides ATCC 17029 molybdate ABC transporter, ATPase subunit YP_001041874.1 107567 D 349101 CDS YP_001041875.1 126464899 4895053 108786..109373 1 NC_009040.1 PFAM: Exopolysaccharide synthesis, ExoD; KEGG: hch:HCH_02767 probable exopolysaccharide synthesis protein; exopolysaccharide synthesis, ExoD 109373 4895053 Rsph17029_4172 Rhodobacter sphaeroides ATCC 17029 exopolysaccharide synthesis, ExoD YP_001041875.1 108786 D 349101 CDS YP_001041876.1 126464900 4894961 complement(109538..109999) 1 NC_009040.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pde:Pden_4422 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase 109999 4894961 Rsph17029_4173 Rhodobacter sphaeroides ATCC 17029 alkylhydroperoxidase YP_001041876.1 109538 R 349101 CDS YP_001041877.1 126464901 4895009 110301..110711 1 NC_009040.1 hypothetical protein 110711 4895009 Rsph17029_4174 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041877.1 110301 D 349101 CDS YP_001041878.1 126464902 4894955 111197..111706 1 NC_009040.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pde:Pden_2812 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 111706 4894955 Rsph17029_4175 Rhodobacter sphaeroides ATCC 17029 BadM/Rrf2 family transcriptional regulator YP_001041878.1 111197 D 349101 CDS YP_001041879.1 126464903 4894987 complement(111844..112470) 1 NC_009040.1 PFAM: Negative transcriptional regulator; KEGG: mlo:mlr6176 transcriptional regulator; FMN-binding negative transcriptional regulator 112470 4894987 Rsph17029_4176 Rhodobacter sphaeroides ATCC 17029 FMN-binding negative transcriptional regulator YP_001041879.1 111844 R 349101 CDS YP_001041880.1 126464904 4895048 complement(112492..113118) 1 NC_009040.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rme:Rmet_3862 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 113118 4895048 Rsph17029_4177 Rhodobacter sphaeroides ATCC 17029 lysine exporter protein LysE/YggA YP_001041880.1 112492 R 349101 CDS YP_001041881.1 126464905 4894945 113191..114090 1 NC_009040.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 114090 4894945 Rsph17029_4178 Rhodobacter sphaeroides ATCC 17029 chromosome replication initiation inhibitor protein YP_001041881.1 113191 D 349101 CDS YP_001041882.1 126464906 4895050 114519..115523 1 NC_009040.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: pde:Pden_4344 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter, periplasmic sulfate-binding protein 115523 4895050 Rsph17029_4179 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001041882.1 114519 D 349101 CDS YP_001041883.1 126464907 4895046 115525..116358 1 NC_009040.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_4343 sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit CysT 116358 4895046 Rsph17029_4180 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter, inner membrane subunit CysT YP_001041883.1 115525 D 349101 CDS YP_001041884.1 126464908 4894953 116362..117237 1 NC_009040.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_4342 sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit CysW 117237 4894953 Rsph17029_4181 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter, inner membrane subunit CysW YP_001041884.1 116362 D 349101 CDS YP_001041885.1 126464909 4895052 117249..117968 1 NC_009040.1 KEGG: pde:Pden_4341 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter, ATPase subunit 117968 4895052 Rsph17029_4182 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter, ATPase subunit YP_001041885.1 117249 D 349101 CDS YP_001041886.1 126464910 4895054 117965..118552 1 NC_009040.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: pde:Pden_5122 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 118552 4895054 Rsph17029_4183 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001041886.1 117965 D 349101 CDS YP_001041887.1 126464911 4895045 complement(118559..119197) 1 NC_009040.1 PFAM: protein of unknown function UPF0126; KEGG: rpb:RPB_1303 protein of unknown function UPF0126; hypothetical protein 119197 4895045 Rsph17029_4184 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041887.1 118559 R 349101 CDS YP_001041888.1 126464912 4894964 119508..122597 1 NC_009040.1 PFAM: Hemolysin-type calcium-binding region; Na-Ca exchanger/integrin-beta4; KEGG: ana:all0364 similar to prohormone convertase; Na-Ca exchanger/integrin-beta4 122597 4894964 Rsph17029_4185 Rhodobacter sphaeroides ATCC 17029 Na-Ca exchanger/integrin-beta4 YP_001041888.1 119508 D 349101 CDS YP_001041893.1 126460779 4897090 36..1346 1 NC_009049.1 KEGG: rsp:RSP_1332 H+-transporting two-sector ATPase, alpha/beta subunit; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; FliI/YscN family ATPase 1346 4897090 Rsph17029_0001 Rhodobacter sphaeroides ATCC 17029 FliI/YscN family ATPase YP_001041893.1 36 D 349101 CDS YP_001041894.1 126460780 4895900 complement(1350..1673) 1 NC_009049.1 KEGG: rsp:RSP_1333 hypothetical protein; hypothetical protein 1673 4895900 Rsph17029_0002 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041894.1 1350 R 349101 CDS YP_001041895.1 126460781 4895550 complement(1663..1941) 1 NC_009049.1 KEGG: rsp:RSP_1334 possible chemotactic signal-response protein CheL; putative chemotactic signal-response protein CheL 1941 4895550 Rsph17029_0003 Rhodobacter sphaeroides ATCC 17029 putative chemotactic signal-response protein CheL YP_001041895.1 1663 R 349101 CDS YP_001041896.1 126460782 4897817 2045..4264 1 NC_009049.1 KEGG: rsp:RSP_1335 hypothetical protein; hypothetical protein 4264 4897817 Rsph17029_0004 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041896.1 2045 D 349101 CDS YP_001041897.1 126460783 4896929 4274..4942 1 NC_009049.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Rhodobacter sphaeroides has 2 copies of many flagellar genes; the Rhodobacter protein in this cluster is associated with a set of flagellar genes acquired by lateral gene transfer; these genes are not normally expressed; flagellar basal body rod modification protein 4942 flgD 4896929 flgD Rhodobacter sphaeroides ATCC 17029 flagellar basal body rod modification protein YP_001041897.1 4274 D 349101 CDS YP_001041898.1 126460784 4896595 complement(4937..6466) 1 NC_009049.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: rsp:RSP_1337 probable ubiquinone biosynthesis protein; 2-polyprenylphenol 6-hydroxylase 6466 4896595 Rsph17029_0006 Rhodobacter sphaeroides ATCC 17029 2-polyprenylphenol 6-hydroxylase YP_001041898.1 4937 R 349101 CDS YP_001041899.1 126460785 4896098 complement(6468..7220) 1 NC_009049.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_1338 methyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD 7220 4896098 Rsph17029_0007 Rhodobacter sphaeroides ATCC 17029 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD YP_001041899.1 6468 R 349101 CDS YP_001041900.1 126460786 4896879 7314..8165 1 NC_009049.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 8165 4896879 Rsph17029_0008 Rhodobacter sphaeroides ATCC 17029 formamidopyrimidine-DNA glycosylase YP_001041900.1 7314 D 349101 CDS YP_001041901.1 126460787 4897673 8226..9002 1 NC_009049.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rsp:RSP_1340 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 9002 4897673 Rsph17029_0009 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase/isomerase YP_001041901.1 8226 D 349101 CDS YP_001041902.1 126460788 4895437 9113..9391 1 NC_009049.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 9391 rpsT 4895437 rpsT Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S20 YP_001041902.1 9113 D 349101 CDS YP_001041903.1 126460789 4895599 9930..11297 1 NC_009049.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 11297 dnaA 4895599 dnaA Rhodobacter sphaeroides ATCC 17029 chromosomal replication initiation protein YP_001041903.1 9930 D 349101 CDS YP_001041904.1 126460790 4896445 11415..12533 1 NC_009049.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 12533 4896445 Rsph17029_0012 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit beta YP_001041904.1 11415 D 349101 CDS YP_001041905.1 126460791 4895478 12601..13692 1 NC_009049.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 13692 recF 4895478 recF Rhodobacter sphaeroides ATCC 17029 recombination protein F YP_001041905.1 12601 D 349101 CDS YP_001041906.1 126460792 4896499 13689..14111 1 NC_009049.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1345 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 14111 4896499 Rsph17029_0014 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001041906.1 13689 D 349101 CDS YP_001041907.1 126460793 4898002 14203..16638 1 NC_009049.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 16638 gyrB 4898002 gyrB Rhodobacter sphaeroides ATCC 17029 DNA gyrase subunit B YP_001041907.1 14203 D 349101 CDS YP_001041908.1 126460794 4897044 complement(16595..17884) 1 NC_009049.1 KEGG: rsp:RSP_1348 hypothetical protein; hypothetical protein 17884 4897044 Rsph17029_0016 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041908.1 16595 R 349101 CDS YP_001041909.1 126460795 4896319 17974..19050 1 NC_009049.1 PFAM: AFG1-family ATPase; KEGG: rsp:RSP_1349 hypothetical protein; AFG1 family ATPase 19050 4896319 Rsph17029_0017 Rhodobacter sphaeroides ATCC 17029 AFG1 family ATPase YP_001041909.1 17974 D 349101 CDS YP_001041910.1 126460796 4895378 complement(19254..20129) 1 NC_009049.1 KEGG: rsp:RSP_1350 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 20129 4895378 Rsph17029_0018 Rhodobacter sphaeroides ATCC 17029 phosphoserine phosphatase SerB YP_001041910.1 19254 R 349101 CDS YP_001041911.1 126460797 4896956 20269..21426 1 NC_009049.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 21426 4896956 Rsph17029_0019 Rhodobacter sphaeroides ATCC 17029 phosphoserine aminotransferase YP_001041911.1 20269 D 349101 CDS YP_001041912.1 126460798 4897010 21507..23102 1 NC_009049.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 23102 4897010 Rsph17029_0020 Rhodobacter sphaeroides ATCC 17029 D-3-phosphoglycerate dehydrogenase YP_001041912.1 21507 D 349101 CDS YP_001041913.1 126460799 4896215 23199..23930 1 NC_009049.1 PFAM: metallophosphoesterase; KEGG: rsp:RSP_1353 putative protein phosphatase; metallophosphoesterase 23930 4896215 Rsph17029_0021 Rhodobacter sphaeroides ATCC 17029 metallophosphoesterase YP_001041913.1 23199 D 349101 CDS YP_001041914.1 126460800 4896836 23980..25182 1 NC_009049.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 25182 4896836 Rsph17029_0022 Rhodobacter sphaeroides ATCC 17029 beta-ketothiolase YP_001041914.1 23980 D 349101 CDS YP_001041915.1 126460801 4898084 complement(25192..27216) 1 NC_009049.1 KEGG: rsp:RSP_1355 glycosyl transferase, family 51; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C 27216 4898084 Rsph17029_0023 Rhodobacter sphaeroides ATCC 17029 penicillin-binding protein 1C YP_001041915.1 25192 R 349101 CDS YP_001041916.1 126460802 4897787 complement(27213..32639) 1 NC_009049.1 PFAM: alpha-2-macroglobulin domain protein; N/apple PAN domain protein; alpha-2-macroglobulin domain protein 2; SMART: Apple; KEGG: rsp:RSP_1356 hypothetical protein; alpha-2-macroglobulin domain-containing protein 32639 4897787 Rsph17029_0024 Rhodobacter sphaeroides ATCC 17029 alpha-2-macroglobulin domain-containing protein YP_001041916.1 27213 R 349101 CDS YP_001041917.1 126460803 4896619 32793..35342 1 NC_009049.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1357 cytoplasmic sensor hybrid histidine kinase; histidine kinase 35342 4896619 Rsph17029_0025 Rhodobacter sphaeroides ATCC 17029 histidine kinase YP_001041917.1 32793 D 349101 CDS YP_001041918.1 126460804 4895661 complement(35496..36269) 1 NC_009049.1 PFAM: protein of unknown function DUF328; KEGG: rsp:RSP_1358 hypothetical protein; hypothetical protein 36269 4895661 Rsph17029_0026 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041918.1 35496 R 349101 CDS YP_001041919.1 126460805 4896069 complement(36269..38314) 1 NC_009049.1 KEGG: rsp:RSP_1359 DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ 38314 4896069 Rsph17029_0027 Rhodobacter sphaeroides ATCC 17029 ATP-dependent DNA helicase RecQ YP_001041919.1 36269 R 349101 CDS YP_001041920.1 126460806 4897674 complement(38372..38662) 1 NC_009049.1 PFAM: protein of unknown function YGGT; KEGG: rsp:RSP_1360 hypothetical protein; hypothetical protein 38662 4897674 Rsph17029_0028 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041920.1 38372 R 349101 CDS YP_001041921.1 126460807 4896541 38791..39318 1 NC_009049.1 KEGG: rsp:RSP_1361 hypothetical protein; hypothetical protein 39318 4896541 Rsph17029_0029 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041921.1 38791 D 349101 CDS YP_001041922.1 126460808 4897633 39413..40783 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1362 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 40783 4897633 Rsph17029_0030 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001041922.1 39413 D 349101 CDS YP_001041923.1 126460809 4897285 40780..41664 1 NC_009049.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 41664 mepA 4897285 mepA Rhodobacter sphaeroides ATCC 17029 penicillin-insensitive murein endopeptidase YP_001041923.1 40780 D 349101 CDS YP_001041924.1 126460810 4896419 41637..42527 1 NC_009049.1 KEGG: rsp:RSP_1364 hypothetical protein; hypothetical protein 42527 4896419 Rsph17029_0032 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041924.1 41637 D 349101 CDS YP_001041925.1 126460811 4896876 42609..43235 1 NC_009049.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: rsp:RSP_1365 hypothetical protein; hypothetical protein 43235 4896876 Rsph17029_0033 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041925.1 42609 D 349101 CDS YP_001041926.1 126460812 4897318 43515..43940 1 NC_009049.1 PFAM: Class I peptide chain release factor; KEGG: rsp:RSP_1366 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 43940 4897318 Rsph17029_0034 Rhodobacter sphaeroides ATCC 17029 peptidyl-tRNA hydrolase domain-containing protein YP_001041926.1 43515 D 349101 CDS YP_001041927.1 126460813 4897431 complement(43949..45241) 1 NC_009049.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 45241 4897431 Rsph17029_0035 Rhodobacter sphaeroides ATCC 17029 nicotinate phosphoribosyltransferase YP_001041927.1 43949 R 349101 CDS YP_001041928.1 126460814 4896065 complement(45243..45848) 1 NC_009049.1 PFAM: isochorismatase hydrolase; KEGG: rsp:RSP_1368 probable pyrazinamidase/nicotinamidase; nicotinamidase 45848 4896065 Rsph17029_0036 Rhodobacter sphaeroides ATCC 17029 nicotinamidase YP_001041928.1 45243 R 349101 CDS YP_001041929.1 126460815 4897521 46041..46823 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1369 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 46823 4897521 Rsph17029_0037 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001041929.1 46041 D 349101 CDS YP_001041930.1 126460816 4896554 46820..47743 1 NC_009049.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: rsp:RSP_1371 putative 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase 47743 4896554 Rsph17029_0038 Rhodobacter sphaeroides ATCC 17029 2-keto-3-deoxy-galactonokinase YP_001041930.1 46820 D 349101 CDS YP_001041931.1 126460817 4895905 complement(47701..49311) 1 NC_009049.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rsp:RSP_1370 alpha amylase, catalytic subdomain; alpha amylase 49311 4895905 Rsph17029_0039 Rhodobacter sphaeroides ATCC 17029 alpha amylase YP_001041931.1 47701 R 349101 CDS YP_001041932.1 126460818 4895081 49785..51023 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1372 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 51023 4895081 Rsph17029_0040 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001041932.1 49785 D 349101 CDS YP_001041933.1 126460819 4895422 51116..52288 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1373 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 52288 4895422 Rsph17029_0041 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001041933.1 51116 D 349101 CDS YP_001041934.1 126460820 4895792 52337..53371 1 NC_009049.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1374 putative lipopolysaccharide core biosynthesis mannosyltransferase protein; group 1 glycosyl transferase 53371 4895792 Rsph17029_0042 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001041934.1 52337 D 349101 CDS YP_001041935.1 126460821 4896106 53368..53994 1 NC_009049.1 KEGG: rsp:RSP_1375 hypothetical protein; hypothetical protein 53994 4896106 Rsph17029_0043 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041935.1 53368 D 349101 CDS YP_001041936.1 126460822 4896081 54123..55145 1 NC_009049.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 55145 4896081 Rsph17029_0044 Rhodobacter sphaeroides ATCC 17029 aspartate-semialdehyde dehydrogenase YP_001041936.1 54123 D 349101 CDS YP_001041937.1 126460823 4896442 complement(55230..55874) 1 NC_009049.1 PFAM: carbonic anhydrase; KEGG: rsp:RSP_1377 carbonic anhydrase; carbonate dehydratase 55874 4896442 Rsph17029_0045 Rhodobacter sphaeroides ATCC 17029 carbonate dehydratase YP_001041937.1 55230 R 349101 CDS YP_001041938.1 126460824 4895817 56013..56396 1 NC_009049.1 KEGG: rsp:RSP_1378 hypothetical protein; hypothetical protein 56396 4895817 Rsph17029_0046 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041938.1 56013 D 349101 CDS YP_001041939.1 126460825 4896612 56467..57852 1 NC_009049.1 PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: rsp:RSP_1379 cytosol aminopeptidase; leucyl aminopeptidase 57852 4896612 Rsph17029_0047 Rhodobacter sphaeroides ATCC 17029 leucyl aminopeptidase YP_001041939.1 56467 D 349101 CDS YP_001041940.1 126460826 4896750 57852..58664 1 NC_009049.1 PFAM: NLP/P60 protein; KEGG: rsp:RSP_1380 hypothetical protein; NLP/P60 protein 58664 4896750 Rsph17029_0048 Rhodobacter sphaeroides ATCC 17029 NLP/P60 protein YP_001041940.1 57852 D 349101 CDS YP_001041941.1 126460827 4896923 complement(58771..59991) 1 NC_009049.1 PFAM: protein of unknown function DUF1006; KEGG: rsp:RSP_1381 hypothetical protein; hypothetical protein 59991 4896923 Rsph17029_0049 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041941.1 58771 R 349101 CDS YP_001041942.1 126460828 4896930 complement(60006..61184) 1 NC_009049.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rsp:RSP_1382 radical SAM superfamily protein; radical SAM protein 61184 4896930 Rsph17029_0050 Rhodobacter sphaeroides ATCC 17029 radical SAM protein YP_001041942.1 60006 R 349101 CDS YP_001041943.1 126460829 4896906 complement(61323..61853) 1 NC_009049.1 KEGG: rsp:RSP_1383 hypothetical protein; hypothetical protein 61853 4896906 Rsph17029_0051 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041943.1 61323 R 349101 CDS YP_001041944.1 126460830 4896894 62020..63009 1 NC_009049.1 PFAM: L-asparaginase II; KEGG: rsp:RSP_1384 hypothetical protein; L-asparaginase II 63009 4896894 Rsph17029_0052 Rhodobacter sphaeroides ATCC 17029 L-asparaginase II YP_001041944.1 62020 D 349101 CDS YP_001041945.1 126460831 4897080 complement(63025..63864) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: rsp:RSP_1385 hypothetical protein; NAD-dependent epimerase/dehydratase 63864 4897080 Rsph17029_0053 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001041945.1 63025 R 349101 CDS YP_001041946.1 126460832 4897100 63999..65477 1 NC_009049.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 65477 4897100 Rsph17029_0054 Rhodobacter sphaeroides ATCC 17029 AMP nucleosidase YP_001041946.1 63999 D 349101 CDS YP_001041947.1 126460833 4897175 65606..65893 1 NC_009049.1 PFAM: histone family protein DNA-binding protein; KEGG: rsp:RSP_1388 DNA-binding protein HU, form N; histone family protein DNA-binding protein 65893 4897175 Rsph17029_0055 Rhodobacter sphaeroides ATCC 17029 histone family protein DNA-binding protein YP_001041947.1 65606 D 349101 CDS YP_001041948.1 126460834 4897733 65963..66844 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1390 putative transporter, DMT superfamily; hypothetical protein 66844 4897733 Rsph17029_0056 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041948.1 65963 D 349101 CDS YP_001041949.1 126460835 4897234 complement(66841..67941) 1 NC_009049.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 67941 4897234 Rsph17029_0057 Rhodobacter sphaeroides ATCC 17029 chorismate synthase YP_001041949.1 66841 R 349101 CDS YP_001041950.1 126460836 4898027 68188..69171 1 NC_009049.1 part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 69171 tbpA 4898027 tbpA Rhodobacter sphaeroides ATCC 17029 thiamine transporter substrate binding subunit YP_001041950.1 68188 D 349101 CDS YP_001041951.1 126460837 4897398 69147..70661 1 NC_009049.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 70661 thiP 4897398 thiP Rhodobacter sphaeroides ATCC 17029 thiamine transporter membrane protein YP_001041951.1 69147 D 349101 CDS YP_001041952.1 126460838 4897481 70648..71343 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1393 ABC thiamine transporter, ATPase subunit; ABC transporter 71343 4897481 Rsph17029_0060 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001041952.1 70648 D 349101 CDS YP_001041953.1 126460839 4897547 complement(71393..72250) 1 NC_009049.1 PFAM: cytochrome c1; KEGG: rsp:RSP_1394 cytochrome c1 precursor; cytochrome c1 72250 4897547 Rsph17029_0061 Rhodobacter sphaeroides ATCC 17029 cytochrome c1 YP_001041953.1 71393 R 349101 CDS YP_001041954.1 126460840 4897640 complement(72268..73605) 1 NC_009049.1 PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: rsp:RSP_1395 cytochrome b; cytochrome b/b6 domain-containing protein 73605 4897640 Rsph17029_0062 Rhodobacter sphaeroides ATCC 17029 cytochrome b/b6 domain-containing protein YP_001041954.1 72268 R 349101 CDS YP_001041955.1 126460841 4897603 complement(73616..74179) 1 NC_009049.1 KEGG: rsp:RSP_1396 ubiquinol-cytochrome c reductase, iron-sulfur protein; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 74179 4897603 Rsph17029_0063 Rhodobacter sphaeroides ATCC 17029 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001041955.1 73616 R 349101 CDS YP_001041956.1 126460842 4895546 complement(74685..75293) 1 NC_009049.1 KEGG: rsp:RSP_1397 glutathione S-transferase; glutathione S-transferase 75293 4895546 Rsph17029_0064 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase YP_001041956.1 74685 R 349101 CDS YP_001041957.1 126460843 4895445 complement(75298..75591) 1 NC_009049.1 KEGG: rsp:RSP_6156 hypothetical protein; hypothetical protein 75591 4895445 Rsph17029_0065 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041957.1 75298 R 349101 CDS YP_001041958.1 126460844 4895190 complement(75722..75847) 1 NC_009049.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 75847 rpmJ 4895190 rpmJ Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L36 YP_001041958.1 75722 R 349101 CDS YP_001041959.1 126460845 4895658 76144..77004 1 NC_009049.1 PFAM: N-formylglutamate amidohydrolase; KEGG: rsp:RSP_1399 hypothetical protein; N-formylglutamate amidohydrolase 77004 4895658 Rsph17029_0067 Rhodobacter sphaeroides ATCC 17029 N-formylglutamate amidohydrolase YP_001041959.1 76144 D 349101 CDS YP_001041960.1 126460846 4895572 complement(77008..78261) 1 NC_009049.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 78261 4895572 Rsph17029_0068 Rhodobacter sphaeroides ATCC 17029 DNA polymerase IV YP_001041960.1 77008 R 349101 CDS YP_001041961.1 126460847 4895350 78388..79269 1 NC_009049.1 PFAM: band 7 protein; KEGG: rsp:RSP_1401 band 7 protein; hypothetical protein 79269 4895350 Rsph17029_0069 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041961.1 78388 D 349101 CDS YP_001041962.1 126460848 4895567 79266..79535 1 NC_009049.1 KEGG: rsp:RSP_6157 conserved hypoothetical protein; hypothetical protein 79535 4895567 Rsph17029_0070 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041962.1 79266 D 349101 CDS YP_001041963.1 126460849 4895388 79844..80179 1 NC_009049.1 KEGG: rsp:RSP_1403 conserved hypoothetical protein; hypothetical protein 80179 4895388 Rsph17029_0071 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041963.1 79844 D 349101 CDS YP_001041964.1 126460850 4895449 complement(80184..80882) 1 NC_009049.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 80882 4895449 Rsph17029_0072 Rhodobacter sphaeroides ATCC 17029 orotidine 5'-phosphate decarboxylase YP_001041964.1 80184 R 349101 CDS YP_001041965.1 126460851 4896852 80986..81873 1 NC_009049.1 PFAM: ROK family protein; KEGG: rsp:RSP_1405 ROK family protein; ROK family protein 81873 4896852 Rsph17029_0073 Rhodobacter sphaeroides ATCC 17029 ROK family protein YP_001041965.1 80986 D 349101 CDS YP_001041966.1 126460852 4896783 complement(81887..82120) 1 NC_009049.1 KEGG: rsp:RSP_1406 hypothetical protein; hypothetical protein 82120 4896783 Rsph17029_0074 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041966.1 81887 R 349101 CDS YP_001041967.1 126460853 4896635 82423..85035 1 NC_009049.1 PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1408 chaperone ClpB; ATPase 85035 4896635 Rsph17029_0075 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001041967.1 82423 D 349101 CDS YP_001041968.1 126460854 4896937 complement(85096..85566) 1 NC_009049.1 PFAM: beta-Ig-H3/fasciclin; KEGG: rsp:RSP_1409 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 85566 4896937 Rsph17029_0076 Rhodobacter sphaeroides ATCC 17029 beta-Ig-H3/fasciclin YP_001041968.1 85096 R 349101 CDS YP_001041969.1 126460855 4895779 85763..86668 1 NC_009049.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 86668 4895779 Rsph17029_0077 Rhodobacter sphaeroides ATCC 17029 putative sulfite oxidase subunit YedY YP_001041969.1 85763 D 349101 CDS YP_001041970.1 126460856 4896057 86669..87274 1 NC_009049.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 87274 4896057 Rsph17029_0078 Rhodobacter sphaeroides ATCC 17029 putative sulfite oxidase subunit YedZ YP_001041970.1 86669 D 349101 CDS YP_001041971.1 126460857 4896004 complement(87359..87685) 1 NC_009049.1 KEGG: rsp:RSP_3837 hypothetical protein; hypothetical protein 87685 4896004 Rsph17029_0079 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041971.1 87359 R 349101 CDS YP_001041973.1 126460859 4895427 complement(93400..94098) 1 NC_009049.1 KEGG: rsp:RSP_1433 hypothetical protein; hypothetical protein 94098 4895427 Rsph17029_0081 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041973.1 93400 R 349101 CDS YP_001041974.1 126460860 4896092 complement(94118..95098) 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1434 putative Zn-dependent oxidoreductase; alcohol dehydrogenase 95098 4896092 Rsph17029_0082 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001041974.1 94118 R 349101 CDS YP_001041975.1 126460861 4896250 complement(95114..95773) 1 NC_009049.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_1435 regulatory protein TetR family; TetR family transcriptional regulator 95773 4896250 Rsph17029_0083 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001041975.1 95114 R 349101 CDS YP_001041976.1 126460862 4895759 96282..96911 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1436 ABC transporter, duplicated ATPase domains; ABC transporter 96911 4895759 Rsph17029_0084 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001041976.1 96282 D 349101 CDS YP_001041977.1 126460863 4895613 complement(96933..97337) 1 NC_009049.1 hypothetical protein 97337 4895613 Rsph17029_0085 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041977.1 96933 R 349101 CDS YP_001041978.1 126460864 4895462 complement(97368..98135) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1437 ABC Fe+3 hydroxamate (ferrichrome) transporter, ATPase subunit; ABC transporter 98135 4895462 Rsph17029_0086 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001041978.1 97368 R 349101 CDS YP_001041979.1 126460865 4895346 complement(98132..100108) 1 NC_009049.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 100108 4895346 Rsph17029_0087 Rhodobacter sphaeroides ATCC 17029 iron-hydroxamate transporter permease subunit YP_001041979.1 98132 R 349101 CDS YP_001041980.1 126460866 4896279 complement(100105..101004) 1 NC_009049.1 PFAM: periplasmic binding protein; KEGG: rsp:RSP_1439 ABC Fe+3 hydroxamate (ferrichrome) transporter, periplasmic siderophore binding protein; periplasmic binding protein 101004 4896279 Rsph17029_0088 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein YP_001041980.1 100105 R 349101 CDS YP_001041981.1 126460867 4895258 complement(100998..103097) 1 NC_009049.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_1440 TonB dependent, hydroxamate-type ferrisiderophore, outer membrane receptor; TonB-dependent siderophore receptor 103097 4895258 Rsph17029_0089 Rhodobacter sphaeroides ATCC 17029 TonB-dependent siderophore receptor YP_001041981.1 100998 R 349101 CDS YP_001041982.1 126460868 4895220 103424..104557 1 NC_009049.1 PFAM: ROK family protein; transcriptional regulator TrmB; KEGG: rsp:RSP_1441 regulatory protein, GntR family; ROK family protein 104557 4895220 Rsph17029_0090 Rhodobacter sphaeroides ATCC 17029 ROK family protein YP_001041982.1 103424 D 349101 CDS YP_001041983.1 126460869 4896170 104675..105931 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_1442 ABC sugar transporter, periplasmic sugar-binding protein; extracellular solute-binding protein 105931 4896170 Rsph17029_0091 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001041983.1 104675 D 349101 CDS YP_001041984.1 126460870 4896294 106020..106910 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1443 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 106910 4896294 Rsph17029_0092 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001041984.1 106020 D 349101 CDS YP_001041985.1 126460871 4897093 106907..107755 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1444 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 107755 4897093 Rsph17029_0093 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001041985.1 106907 D 349101 CDS YP_001041986.1 126460872 4897360 107775..108878 1 NC_009049.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1445 ABC sugar transporter, ATPase subunit; ABC transporter 108878 4897360 Rsph17029_0094 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001041986.1 107775 D 349101 CDS YP_001041987.1 126460873 4897337 108875..109816 1 NC_009049.1 PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: rsp:RSP_1446 putative sugar kinase; BadF/BadG/BcrA/BcrD type ATPase 109816 4897337 Rsph17029_0095 Rhodobacter sphaeroides ATCC 17029 BadF/BadG/BcrA/BcrD type ATPase YP_001041987.1 108875 D 349101 CDS YP_001041988.1 126460874 4896231 109843..110847 1 NC_009049.1 PFAM: sugar isomerase (SIS); KEGG: rsp:RSP_1447 possible glucosamine--fructose-6-phosphate aminotransferase (isomerizing); sugar isomerase (SIS) 110847 4896231 Rsph17029_0096 Rhodobacter sphaeroides ATCC 17029 sugar isomerase (SIS) YP_001041988.1 109843 D 349101 CDS YP_001041989.1 126460875 4896983 110902..111921 1 NC_009049.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: rsp:RSP_1448 putative L-allo-threonine aldolase; threonine aldolase 111921 4896983 Rsph17029_0097 Rhodobacter sphaeroides ATCC 17029 threonine aldolase YP_001041989.1 110902 D 349101 CDS YP_001041990.1 126460876 4897478 complement(112106..112876) 1 NC_009049.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_1449 putative transcriptional regulator of sugar metabolism; DeoR family transcriptional regulator 112876 4897478 Rsph17029_0098 Rhodobacter sphaeroides ATCC 17029 DeoR family transcriptional regulator YP_001041990.1 112106 R 349101 CDS YP_001041991.1 126460877 4898005 113149..113943 1 NC_009049.1 PFAM: inositol monophosphatase; KEGG: rsp:RSP_1450 inositol monophosphatase family protein; inositol monophosphatase 113943 4898005 Rsph17029_0099 Rhodobacter sphaeroides ATCC 17029 inositol monophosphatase YP_001041991.1 113149 D 349101 CDS YP_001041992.1 126460878 4895336 114016..115590 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1451 ABC peptide/nickel/opine transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 115590 4895336 Rsph17029_0100 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001041992.1 114016 D 349101 CDS YP_001041993.1 126460879 4897350 115669..116649 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1452 ABC peptide/nickel/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 116649 4897350 Rsph17029_0101 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001041993.1 115669 D 349101 CDS YP_001041994.1 126460880 4895239 116649..117560 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1453 ABC peptide/nickel/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 117560 4895239 Rsph17029_0102 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001041994.1 116649 D 349101 CDS YP_001041995.1 126460881 4897253 117562..119415 1 NC_009049.1 KEGG: rsp:RSP_1454 ABC peptide/nickel/opine transporter, fused ATPase subunits; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 119415 4897253 Rsph17029_0103 Rhodobacter sphaeroides ATCC 17029 oligopeptide/dipeptide ABC transporter ATPase YP_001041995.1 117562 D 349101 CDS YP_001041996.1 126460882 4895967 119408..120682 1 NC_009049.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 120682 4895967 Rsph17029_0104 Rhodobacter sphaeroides ATCC 17029 allantoate amidohydrolase YP_001041996.1 119408 D 349101 CDS YP_001041997.1 126460883 4896914 120679..121623 1 NC_009049.1 PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: rsp:RSP_1456 hypothetical protein; aminoglycoside phosphotransferase 121623 4896914 Rsph17029_0105 Rhodobacter sphaeroides ATCC 17029 aminoglycoside phosphotransferase YP_001041997.1 120679 D 349101 CDS YP_001041998.1 126460884 4896933 121620..122564 1 NC_009049.1 PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: rsp:RSP_1457 putative choline kinase; choline/ethanolamine kinase 122564 4896933 Rsph17029_0106 Rhodobacter sphaeroides ATCC 17029 choline/ethanolamine kinase YP_001041998.1 121620 D 349101 CDS YP_001041999.1 126460885 4896890 complement(123074..123337) 1 NC_009049.1 hypothetical protein 123337 4896890 Rsph17029_0107 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001041999.1 123074 R 349101 CDS YP_001042000.1 126460886 4895502 complement(123743..125347) 1 NC_009049.1 KEGG: rsp:RSP_1458 putative DNA repair enzyme; putative DNA repair enzyme 125347 4895502 Rsph17029_0108 Rhodobacter sphaeroides ATCC 17029 putative DNA repair enzyme YP_001042000.1 123743 R 349101 CDS YP_001042001.1 126460887 4896242 complement(125572..125844) 1 NC_009049.1 KEGG: rsp:RSP_6001 hypothetical protein; hypothetical protein 125844 4896242 Rsph17029_0109 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042001.1 125572 R 349101 CDS YP_001042002.1 126460888 4895995 126046..126792 1 NC_009049.1 KEGG: rsp:RSP_1459 hypothetical protein; hypothetical protein 126792 4895995 Rsph17029_0110 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042002.1 126046 D 349101 CDS YP_001042003.1 126460889 4895713 126923..127168 1 NC_009049.1 KEGG: rsp:RSP_1460 hypothetical protein; hypothetical protein 127168 4895713 Rsph17029_0111 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042003.1 126923 D 349101 CDS YP_001042004.1 126460890 4895710 127216..128367 1 NC_009049.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: rsp:RSP_1461 putative 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 128367 4895710 Rsph17029_0112 Rhodobacter sphaeroides ATCC 17029 3-deoxy-D-manno-octulosonic-acid transferase YP_001042004.1 127216 D 349101 CDS YP_001042005.1 126460891 4895696 128367..129365 1 NC_009049.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 129365 lpxK 4895696 lpxK Rhodobacter sphaeroides ATCC 17029 tetraacyldisaccharide 4'-kinase YP_001042005.1 128367 D 349101 CDS YP_001042006.1 126460892 4895586 complement(129464..130609) 1 NC_009049.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rsp:RSP_1463 putative acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 130609 4895586 Rsph17029_0114 Rhodobacter sphaeroides ATCC 17029 L-carnitine dehydratase/bile acid-inducible protein F YP_001042006.1 129464 R 349101 CDS YP_001042007.1 126460893 4895541 complement(130606..131277) 1 NC_009049.1 KEGG: rsp:RSP_1464 putative periplasmic thiol-disulphide interchange protein (DsbA family); periplasmic thiol-disulfide interchange protein 131277 4895541 Rsph17029_0115 Rhodobacter sphaeroides ATCC 17029 periplasmic thiol-disulfide interchange protein YP_001042007.1 130606 R 349101 CDS YP_001042008.1 126460894 4895397 complement(131289..131819) 1 NC_009049.1 PFAM: protein of unknown function DUF1159; KEGG: rsp:RSP_1465 hypothetical protein; hypothetical protein 131819 4895397 Rsph17029_0116 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042008.1 131289 R 349101 CDS YP_001042009.1 126460895 4895677 131901..133004 1 NC_009049.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rsp:RSP_1466 putative MutY, A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 133004 4895677 Rsph17029_0117 Rhodobacter sphaeroides ATCC 17029 A/G-specific adenine glycosylase YP_001042009.1 131901 D 349101 CDS YP_001042010.1 126460896 4898094 133042..134313 1 NC_009049.1 PFAM: fatty acid desaturase; KEGG: rsp:RSP_1467 possible alkane hydroxylase (fatty acid desaturase); alkane 1-monooxygenase 134313 4898094 Rsph17029_0118 Rhodobacter sphaeroides ATCC 17029 alkane 1-monooxygenase YP_001042010.1 133042 D 349101 CDS YP_001042011.1 126460897 4897384 complement(134469..135587) 1 NC_009049.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rsp:RSP_1468 site-specific DNA-methyltransferase; DNA methylase N-4/N-6 domain-containing protein 135587 4897384 Rsph17029_0119 Rhodobacter sphaeroides ATCC 17029 DNA methylase N-4/N-6 domain-containing protein YP_001042011.1 134469 R 349101 CDS YP_001042012.1 126460898 4897130 complement(135676..136314) 1 NC_009049.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 136314 rnhB 4897130 rnhB Rhodobacter sphaeroides ATCC 17029 ribonuclease HII YP_001042012.1 135676 R 349101 CDS YP_001042013.1 126460899 4896889 complement(136470..136934) 1 NC_009049.1 KEGG: rsp:RSP_1471 hypothetical protein; hypothetical protein 136934 4896889 Rsph17029_0121 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042013.1 136470 R 349101 CDS YP_001042014.1 126460900 4896788 137258..137581 1 NC_009049.1 KEGG: rsp:RSP_6002 hypothetical protein; hypothetical protein 137581 4896788 Rsph17029_0122 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042014.1 137258 D 349101 CDS YP_001042015.1 126460901 4896568 137553..138257 1 NC_009049.1 KEGG: rsp:RSP_1472 hypothetical protein; response regulator receiver protein 138257 4896568 Rsph17029_0123 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042015.1 137553 D 349101 CDS YP_001042016.1 126460902 4896312 complement(138283..138654) 1 NC_009049.1 KEGG: rsp:RSP_1473 hypothetical protein; hypothetical protein 138654 4896312 Rsph17029_0124 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042016.1 138283 R 349101 CDS YP_001042017.1 126460903 4896095 138858..139955 1 NC_009049.1 TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rsp:RSP_1474 putative carboxynorspermidine decarboxylase protein; carboxynorspermidine decarboxylase 139955 4896095 Rsph17029_0125 Rhodobacter sphaeroides ATCC 17029 carboxynorspermidine decarboxylase YP_001042017.1 138858 D 349101 CDS YP_001042018.1 126460904 4895972 139992..141230 1 NC_009049.1 PFAM: Saccharopine dehydrogenase; KEGG: rsp:RSP_1475 saccharopine dehydrogenase family; saccharopine dehydrogenase 141230 4895972 Rsph17029_0126 Rhodobacter sphaeroides ATCC 17029 saccharopine dehydrogenase YP_001042018.1 139992 D 349101 CDS YP_001042019.1 126460905 4895956 complement(141424..143367) 1 NC_009049.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_1476 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 143367 4895956 Rsph17029_0127 Rhodobacter sphaeroides ATCC 17029 heavy metal translocating P-type ATPase YP_001042019.1 141424 R 349101 CDS YP_001042020.1 126460906 4895733 complement(143446..143625) 1 NC_009049.1 KEGG: rsp:RSP_6210 hypothetical protein; hypothetical protein 143625 4895733 Rsph17029_0128 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042020.1 143446 R 349101 CDS YP_001042021.1 126460907 4895656 complement(143652..145271) 1 NC_009049.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1478 ABC oligopeptide transporter, fused ATPase subunits; ABC transporter 145271 4895656 Rsph17029_0129 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042021.1 143652 R 349101 CDS YP_001042022.1 126460908 4895529 complement(145273..146412) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1479 ABC oligopeptide transporter, inner membrane subunit OppC; binding-protein-dependent transport system inner membrane protein 146412 4895529 Rsph17029_0130 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042022.1 145273 R 349101 CDS YP_001042023.1 126460909 4895236 complement(146405..147328) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1480 ABC oligopeptide transporter, inner membrane subunit OppB; binding-protein-dependent transport system inner membrane protein 147328 4895236 Rsph17029_0131 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042023.1 146405 R 349101 CDS YP_001042024.1 126460910 4895266 complement(147385..148974) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA; extracellular solute-binding protein 148974 4895266 Rsph17029_0132 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001042024.1 147385 R 349101 CDS YP_001042025.1 126460911 4897408 complement(149421..149762) 1 NC_009049.1 KEGG: rpc:RPC_4596 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein 149762 4897408 Rsph17029_0133 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042025.1 149421 R 349101 CDS YP_001042026.1 126460912 4895123 149816..150175 1 NC_009049.1 KEGG: rsp:RSP_1483 hypothetical protein; hypothetical protein 150175 4895123 Rsph17029_0134 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042026.1 149816 D 349101 CDS YP_001042027.1 126460913 4895575 complement(150248..152629) 1 NC_009049.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_1485 ATP-dependent RNA helicase; DEAD/DEAH box helicase 152629 4895575 Rsph17029_0135 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001042027.1 150248 R 349101 CDS YP_001042028.1 126460914 4896649 152772..153377 1 NC_009049.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_1486 regulatory protein, TetR family; TetR family transcriptional regulator 153377 4896649 Rsph17029_0136 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001042028.1 152772 D 349101 CDS YP_001042029.1 126460915 4896668 153444..153791 1 NC_009049.1 PFAM: protein of unknown function DUF1428; KEGG: rsp:RSP_1487 hypothetical protein; hypothetical protein 153791 4896668 Rsph17029_0137 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042029.1 153444 D 349101 CDS YP_001042030.1 126460916 4896284 153793..154536 1 NC_009049.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1488 possible glyoxalase; glyoxalase/bleomycin resistance protein/dioxygenase 154536 4896284 Rsph17029_0138 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001042030.1 153793 D 349101 CDS YP_001042031.1 126460917 4895125 154668..155582 1 NC_009049.1 TIGRFAM: thioredoxin; PFAM: Tetratricopeptide TPR_4; Thioredoxin domain; KEGG: rsp:RSP_1489 protein containing thioredoxin domain; thioredoxin 155582 4895125 Rsph17029_0139 Rhodobacter sphaeroides ATCC 17029 thioredoxin YP_001042031.1 154668 D 349101 CDS YP_001042032.1 126460918 4895704 155586..156254 1 NC_009049.1 PFAM: peptidase S16, lon domain protein; KEGG: rsp:RSP_1490 putative ATP-dependent protease La, LON; peptidase S16, lon domain-containing protein 156254 4895704 Rsph17029_0140 Rhodobacter sphaeroides ATCC 17029 peptidase S16, lon domain-containing protein YP_001042032.1 155586 D 349101 CDS YP_001042033.1 126460919 4895866 156251..156430 1 NC_009049.1 PFAM: protein of unknown function DUF343; KEGG: rsp:RSP_1491 hypothetical protein; hypothetical protein 156430 4895866 Rsph17029_0141 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042033.1 156251 D 349101 CDS YP_001042034.1 126460920 4895743 complement(156507..157736) 1 NC_009049.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rsp:RSP_1492 UbiH/COQ6 monooxygenase family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 157736 4895743 Rsph17029_0142 Rhodobacter sphaeroides ATCC 17029 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001042034.1 156507 R 349101 CDS YP_001042035.1 126460921 4896589 157818..159143 1 NC_009049.1 PFAM: Amidase; KEGG: rsp:RSP_1493 amidase; amidase 159143 4896589 Rsph17029_0143 Rhodobacter sphaeroides ATCC 17029 amidase YP_001042035.1 157818 D 349101 CDS YP_001042036.1 126460922 4895574 159266..160444 1 NC_009049.1 PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_1494 putative aspartate aminotransferase; class I and II aminotransferase 160444 4895574 Rsph17029_0144 Rhodobacter sphaeroides ATCC 17029 class I and II aminotransferase YP_001042036.1 159266 D 349101 CDS YP_001042037.1 126460923 4895639 160455..163739 1 NC_009049.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: rsp:RSP_1495 putative cell division protein; cell division protein FtsK 163739 4895639 Rsph17029_0145 Rhodobacter sphaeroides ATCC 17029 cell division protein FtsK YP_001042037.1 160455 D 349101 CDS YP_001042038.1 126460924 4896354 163871..164509 1 NC_009049.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: rsp:RSP_1497 putative outer membrane lipoprotein carrier protein; outer membrane lipoprotein carrier protein LolA 164509 4896354 Rsph17029_0146 Rhodobacter sphaeroides ATCC 17029 outer membrane lipoprotein carrier protein LolA YP_001042038.1 163871 D 349101 CDS YP_001042039.1 126460925 4896660 complement(164571..165152) 1 NC_009049.1 KEGG: rsp:RSP_1496 hypothetical protein; hypothetical protein 165152 4896660 Rsph17029_0147 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042039.1 164571 R 349101 CDS YP_001042040.1 126460926 4895363 165384..165749 1 NC_009049.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: rsp:RSP_1498 hypothetical protein; hemimethylated DNA binding protein 165749 4895363 Rsph17029_0148 Rhodobacter sphaeroides ATCC 17029 hemimethylated DNA binding protein YP_001042040.1 165384 D 349101 CDS YP_001042041.1 126460927 4896168 complement(165790..167418) 1 NC_009049.1 PFAM: gamma-glutamyltranspeptidase; KEGG: rsp:RSP_1499 probable gamma-glutamyltranspeptidase; gamma-glutamyltransferase 167418 4896168 Rsph17029_0149 Rhodobacter sphaeroides ATCC 17029 gamma-glutamyltransferase YP_001042041.1 165790 R 349101 CDS YP_001042042.1 126460928 4895896 complement(167479..168021) 1 NC_009049.1 KEGG: rsp:RSP_1500 possible anti-sigma regulatory kinase; putative anti-sigma regulatory factor 168021 4895896 Rsph17029_0150 Rhodobacter sphaeroides ATCC 17029 putative anti-sigma regulatory factor YP_001042042.1 167479 R 349101 CDS YP_001042043.1 126460929 4895505 complement(168011..168334) 1 NC_009049.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rsp:RSP_1501 antisigma-factor antagonist (STAS) domain protein; anti-sigma-factor antagonist 168334 4895505 Rsph17029_0151 Rhodobacter sphaeroides ATCC 17029 anti-sigma-factor antagonist YP_001042043.1 168011 R 349101 CDS YP_001042044.1 126460930 4898042 168452..168904 1 NC_009049.1 KEGG: rsp:RSP_1502 GAF domain protein; GAF domain-containing protein 168904 4898042 Rsph17029_0152 Rhodobacter sphaeroides ATCC 17029 GAF domain-containing protein YP_001042044.1 168452 D 349101 CDS YP_001042045.1 126460931 4895799 complement(169308..169568) 1 NC_009049.1 KEGG: rsp:RSP_1504 hypothetical protein; hypothetical protein 169568 4895799 Rsph17029_0154 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042045.1 169308 R 349101 CDS YP_001042046.1 126460932 4898077 169652..170299 1 NC_009049.1 PFAM: pseudouridine synthase; KEGG: rsp:RSP_1506 pseudouridine synthase, Rlu; pseudouridine synthase 170299 4898077 Rsph17029_0155 Rhodobacter sphaeroides ATCC 17029 pseudouridine synthase YP_001042046.1 169652 D 349101 CDS YP_001042047.1 126460933 4895812 complement(170275..171030) 1 NC_009049.1 PFAM: metallophosphoesterase; KEGG: rsp:RSP_1505 putative metallo-phosphoesterase; metallophosphoesterase 171030 4895812 Rsph17029_0156 Rhodobacter sphaeroides ATCC 17029 metallophosphoesterase YP_001042047.1 170275 R 349101 CDS YP_001042048.1 126460934 4898062 complement(171027..172487) 1 NC_009049.1 PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_1507 aldehyde dehydrogenase; aldehyde dehydrogenase 172487 4898062 Rsph17029_0157 Rhodobacter sphaeroides ATCC 17029 aldehyde dehydrogenase YP_001042048.1 171027 R 349101 CDS YP_001042049.1 126460935 4896381 complement(173191..174639) 1 NC_009049.1 PFAM: HemY domain protein; KEGG: rsp:RSP_1508 uncharacterized HemY-like membrane protein; HemY domain-containing protein 174639 4896381 Rsph17029_0158 Rhodobacter sphaeroides ATCC 17029 HemY domain-containing protein YP_001042049.1 173191 R 349101 CDS YP_001042050.1 126460936 4898026 complement(174650..175951) 1 NC_009049.1 KEGG: rsp:RSP_6207 hypothetical protein; hypothetical protein 175951 4898026 Rsph17029_0159 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042050.1 174650 R 349101 CDS YP_001042051.1 126460937 4897148 complement(176019..176762) 1 NC_009049.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rsp:RSP_6208 putative uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 176762 4897148 Rsph17029_0160 Rhodobacter sphaeroides ATCC 17029 uroporphyrinogen III synthase HEM4 YP_001042051.1 176019 R 349101 CDS YP_001042052.1 126460938 4896426 176835..177929 1 NC_009049.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 177929 4896426 Rsph17029_0161 Rhodobacter sphaeroides ATCC 17029 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001042052.1 176835 D 349101 CDS YP_001042053.1 126460939 4898006 177926..178843 1 NC_009049.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 178843 gpsA 4898006 gpsA Rhodobacter sphaeroides ATCC 17029 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001042053.1 177926 D 349101 CDS YP_001042054.1 126460940 4898033 178847..179119 1 NC_009049.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 179119 4898033 Rsph17029_0163 Rhodobacter sphaeroides ATCC 17029 YciI-like protein YP_001042054.1 178847 D 349101 CDS YP_001042055.1 126460941 4898045 179119..179544 1 NC_009049.1 PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein; hypothetical protein 179544 4898045 Rsph17029_0164 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042055.1 179119 D 349101 CDS YP_001042056.1 126460942 4898070 179840..181045 1 NC_009049.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 181045 4898070 Rsph17029_0165 Rhodobacter sphaeroides ATCC 17029 tryptophan synthase subunit beta YP_001042056.1 179840 D 349101 CDS YP_001042057.1 126460943 4895515 complement(181203..182594) 1 NC_009049.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 182594 4895515 Rsph17029_0166 Rhodobacter sphaeroides ATCC 17029 S-adenosyl-L-homocysteine hydrolase YP_001042057.1 181203 R 349101 CDS YP_001042058.1 126460944 4895205 182717..183673 1 NC_009049.1 PFAM: glycosyl transferase, family 8; KEGG: rsp:RSP_1515 hypothetical protein of glycosyl transferase family; glycosyl transferase family protein 183673 4895205 Rsph17029_0167 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001042058.1 182717 D 349101 CDS YP_001042059.1 126460945 4897144 183670..184254 1 NC_009049.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: rsp:RSP_1516 putative S-adenosyl L-homocystein hydrolase; metal dependent phosphohydrolase 184254 4897144 Rsph17029_0168 Rhodobacter sphaeroides ATCC 17029 metal dependent phosphohydrolase YP_001042059.1 183670 D 349101 CDS YP_001042060.1 126460946 4895877 complement(184266..184580) 1 NC_009049.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: rsp:RSP_1517 histone-like protein of HNS family; histone family protein nucleoid-structuring protein H-NS 184580 4895877 Rsph17029_0169 Rhodobacter sphaeroides ATCC 17029 histone family protein nucleoid-structuring protein H-NS YP_001042060.1 184266 R 349101 CDS YP_001042061.1 126460947 4897045 complement(184816..185370) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_1518 PrrA (RegA), response regulator involved in oxygen regulation of photosynthesis genes; two component Fis family transcriptional regulator 185370 4897045 Rsph17029_0170 Rhodobacter sphaeroides ATCC 17029 two component Fis family transcriptional regulator YP_001042061.1 184816 R 349101 CDS YP_001042062.1 126460948 4897591 complement(185363..186058) 1 NC_009049.1 PFAM: electron transport protein SCO1/SenC; KEGG: rsp:RSP_1519 PrrC; electron transport protein SCO1/SenC 186058 4897591 Rsph17029_0171 Rhodobacter sphaeroides ATCC 17029 electron transport protein SCO1/SenC YP_001042062.1 185363 R 349101 CDS YP_001042063.1 126460949 4898009 186150..187538 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1520 sensor histidine kinase PrrB (RegB); integral membrane sensor signal transduction histidine kinase 187538 4898009 Rsph17029_0172 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001042063.1 186150 D 349101 CDS YP_001042064.1 126460950 4897134 187665..189227 1 NC_009049.1 KEGG: rsp:RSP_1521 hypothetical protein; hypothetical protein 189227 4897134 Rsph17029_0173 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042064.1 187665 D 349101 CDS YP_001042065.1 126460951 4895411 189460..189969 1 NC_009049.1 PFAM: protein of unknown function UPF0079; KEGG: rsp:RSP_1522 hypothetical protein; hypothetical protein 189969 4895411 Rsph17029_0174 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042065.1 189460 D 349101 CDS YP_001042066.1 126460952 4895909 189962..190987 1 NC_009049.1 PFAM: aminoglycoside phosphotransferase; KEGG: rsp:RSP_1523 hypothetical protein; aminoglycoside phosphotransferase 190987 4895909 Rsph17029_0175 Rhodobacter sphaeroides ATCC 17029 aminoglycoside phosphotransferase YP_001042066.1 189962 D 349101 CDS YP_001042067.1 126460953 4898010 190969..191634 1 NC_009049.1 PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_1524 nucleotidyltransferase family protein; nucleotidyl transferase 191634 4898010 Rsph17029_0176 Rhodobacter sphaeroides ATCC 17029 nucleotidyl transferase YP_001042067.1 190969 D 349101 CDS YP_001042068.1 126460954 4898049 191627..194620 1 NC_009049.1 KEGG: rsp:RSP_1525 putative helicase/exonuclease; putative helicase/exonuclease 194620 4898049 Rsph17029_0177 Rhodobacter sphaeroides ATCC 17029 putative helicase/exonuclease YP_001042068.1 191627 D 349101 CDS YP_001042069.1 126460955 4896369 194649..197969 1 NC_009049.1 TIGRFAM: UvrD-like DNA helicase, C terminal; PFAM: UvrD/REP helicase; KEGG: rsp:RSP_1527 helicase, UvrD/Rep family; UvrD-like DNA helicase, C terminal 197969 4896369 Rsph17029_0178 Rhodobacter sphaeroides ATCC 17029 UvrD-like DNA helicase, C terminal YP_001042069.1 194649 D 349101 CDS YP_001042070.1 126460956 4895805 198028..198348 1 NC_009049.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rsp:RSP_1529 thioredoxin; thioredoxin 198348 4895805 Rsph17029_0179 Rhodobacter sphaeroides ATCC 17029 thioredoxin YP_001042070.1 198028 D 349101 CDS YP_001042071.1 126460957 4898018 complement(198481..199389) 1 NC_009049.1 KEGG: rsp:RSP_1530 hypothetical protein; hypothetical protein 199389 4898018 Rsph17029_0180 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042071.1 198481 R 349101 CDS YP_001042072.1 126460958 4898034 199526..200083 1 NC_009049.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 200083 4898034 Rsph17029_0181 Rhodobacter sphaeroides ATCC 17029 ATP-dependent protease peptidase subunit YP_001042072.1 199526 D 349101 CDS YP_001042073.1 126460959 4898016 200080..201381 1 NC_009049.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 201381 hslU 4898016 hslU Rhodobacter sphaeroides ATCC 17029 ATP-dependent protease ATP-binding subunit HslU YP_001042073.1 200080 D 349101 CDS YP_001042074.1 126460960 4895945 complement(201432..202964) 1 NC_009049.1 PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: rsp:RSP_1533 putative alginate O-acetyltransferase; membrane bound O-acyl transferase, MBOAT family protein 202964 4895945 Rsph17029_0183 Rhodobacter sphaeroides ATCC 17029 membrane bound O-acyl transferase, MBOAT family protein YP_001042074.1 201432 R 349101 CDS YP_001042075.1 126460961 4898004 complement(202964..203209) 1 NC_009049.1 KEGG: rsp:RSP_1534 putative acyl carrier protein; putative acyl carrier protein 203209 4898004 Rsph17029_0184 Rhodobacter sphaeroides ATCC 17029 putative acyl carrier protein YP_001042075.1 202964 R 349101 CDS YP_001042076.1 126460962 4898044 complement(203270..205183) 1 NC_009049.1 TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: rsp:RSP_1535 hypothetical protein; FkbH-like protein 205183 4898044 Rsph17029_0185 Rhodobacter sphaeroides ATCC 17029 FkbH-like protein YP_001042076.1 203270 R 349101 CDS YP_001042077.1 126460963 4898065 complement(205164..205904) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_6005 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 205904 4898065 Rsph17029_0186 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001042077.1 205164 R 349101 CDS YP_001042078.1 126460964 4898025 complement(205901..206305) 1 NC_009049.1 PFAM: MaoC domain protein dehydratase; KEGG: rsp:RSP_1536 conserved hypothetical protein that may be involved in lipid metabolism; dehydratase 206305 4898025 Rsph17029_0187 Rhodobacter sphaeroides ATCC 17029 dehydratase YP_001042078.1 205901 R 349101 CDS YP_001042079.1 126460965 4898066 206583..207497 1 NC_009049.1 KEGG: rsp:RSP_1537 hypothetical protein; hypothetical protein 207497 4898066 Rsph17029_0188 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042079.1 206583 D 349101 CDS YP_001042080.1 126460966 4898052 207576..208349 1 NC_009049.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_1538 probable glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 208349 4898052 Rsph17029_0189 Rhodobacter sphaeroides ATCC 17029 glucose-1-phosphate cytidylyltransferase YP_001042080.1 207576 D 349101 CDS YP_001042081.1 126460967 4896593 complement(208585..209592) 1 NC_009049.1 PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_1539 glycosyl transferase, family 2; glycosyl transferase family protein 209592 4896593 Rsph17029_0190 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001042081.1 208585 R 349101 CDS YP_001042082.1 126460968 4896574 complement(209934..211028) 1 NC_009049.1 KEGG: rsp:RSP_1540 predicted secreted hydrolase; secreted hydrolase 211028 4896574 Rsph17029_0191 Rhodobacter sphaeroides ATCC 17029 secreted hydrolase YP_001042082.1 209934 R 349101 CDS YP_001042083.1 126460969 4897349 complement(211018..213405) 1 NC_009049.1 PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_1541 putative ABC transporter, fused inner membrane subunits; hypothetical protein 213405 4897349 Rsph17029_0192 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042083.1 211018 R 349101 CDS YP_001042084.1 126460970 4896846 complement(213402..214082) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1542 ABC transporter, ATPase subunit; ABC transporter 214082 4896846 Rsph17029_0193 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042084.1 213402 R 349101 CDS YP_001042085.1 126460971 4897589 complement(214368..215426) 1 NC_009049.1 PFAM: Uncharacterised conserved protein UCP028101; KEGG: rsp:RSP_1543 hypothetical protein; hypothetical protein 215426 4897589 Rsph17029_0194 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042085.1 214368 R 349101 CDS YP_001042086.1 126460972 4895412 complement(215428..216417) 1 NC_009049.1 KEGG: rsp:RSP_1544 hypothetical signal peptide protein; putative signal peptide protein 216417 4895412 Rsph17029_0195 Rhodobacter sphaeroides ATCC 17029 putative signal peptide protein YP_001042086.1 215428 R 349101 CDS YP_001042087.1 126460973 4895650 complement(216417..217925) 1 NC_009049.1 PFAM: protein of unknown function DUF1111; KEGG: rsp:RSP_1545 probable thiol oxidoreductase with 2 cytochrome c heme-binding sites; hypothetical protein 217925 4895650 Rsph17029_0196 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042087.1 216417 R 349101 CDS YP_001042088.1 126460974 4895424 complement(218104..218589) 1 NC_009049.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: rsp:RSP_1546 bacterioferritin; bacterioferritin 218589 4895424 Rsph17029_0197 Rhodobacter sphaeroides ATCC 17029 bacterioferritin YP_001042088.1 218104 R 349101 CDS YP_001042089.1 126460975 4897570 complement(218579..218833) 1 NC_009049.1 KEGG: rsp:RSP_1547 probable bacterioferritin-associated ferredoxin; putative bacterioferritin-associated ferredoxin 218833 4897570 Rsph17029_0198 Rhodobacter sphaeroides ATCC 17029 putative bacterioferritin-associated ferredoxin YP_001042089.1 218579 R 349101 CDS YP_001042090.1 126460976 4895306 complement(218915..220240) 1 NC_009049.1 KEGG: rsp:RSP_1548 putative iron-regulated protein; putative iron-regulated protein 220240 4895306 Rsph17029_0199 Rhodobacter sphaeroides ATCC 17029 putative iron-regulated protein YP_001042090.1 218915 R 349101 CDS YP_001042091.1 126460977 4897107 complement(220237..220398) 1 NC_009049.1 KEGG: rsp:RSP_6006 hypothetical protein; hypothetical protein 220398 4897107 Rsph17029_0200 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042091.1 220237 R 349101 CDS YP_001042092.1 126460978 4898037 220749..221432 1 NC_009049.1 PFAM: protein of unknown function DUF533; KEGG: rsp:RSP_1549 hypothetical protein; hypothetical protein 221432 4898037 Rsph17029_0201 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042092.1 220749 D 349101 CDS YP_001042093.1 126460979 4897172 complement(221445..222275) 1 NC_009049.1 PFAM: regulatory proteins, IclR; KEGG: rsp:RSP_1550 regulatory proteins, IclR family; regulatory proteins, IclR 222275 4897172 Rsph17029_0202 Rhodobacter sphaeroides ATCC 17029 regulatory proteins, IclR YP_001042093.1 221445 R 349101 CDS YP_001042094.1 126460980 4895436 222543..222923 1 NC_009049.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1551 putative glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 222923 4895436 Rsph17029_0203 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001042094.1 222543 D 349101 CDS YP_001042095.1 126460981 4897210 complement(223041..223532) 1 NC_009049.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 223532 4897210 Rsph17029_0204 Rhodobacter sphaeroides ATCC 17029 ureidoglycolate hydrolase YP_001042095.1 223041 R 349101 CDS YP_001042096.1 126460982 4898053 complement(223649..224485) 1 NC_009049.1 PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_1553 probable glyoxylate induced protein; hypothetical protein 224485 4898053 Rsph17029_0205 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042096.1 223649 R 349101 CDS YP_001042097.1 126460983 4897476 complement(224482..225897) 1 NC_009049.1 PFAM: polysaccharide deacetylase; KEGG: rsp:RSP_1554 possible polysaccharide deacetylase; polysaccharide deacetylase 225897 4897476 Rsph17029_0206 Rhodobacter sphaeroides ATCC 17029 polysaccharide deacetylase YP_001042097.1 224482 R 349101 CDS YP_001042098.1 126460984 4896356 226044..226397 1 NC_009049.1 PFAM: Transthyretin; KEGG: rsp:RSP_1555 transthyretin-like protein; transthyretin 226397 4896356 Rsph17029_0207 Rhodobacter sphaeroides ATCC 17029 transthyretin YP_001042098.1 226044 D 349101 CDS YP_001042099.1 126460985 4896985 226641..226796 1 NC_009049.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_1556 light-harvesting complex, beta subunit; antenna complex subunit alpha/beta 226796 4896985 Rsph17029_0208 Rhodobacter sphaeroides ATCC 17029 antenna complex subunit alpha/beta YP_001042099.1 226641 D 349101 CDS YP_001042100.1 126460986 4896562 226810..227583 1 NC_009049.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_6158 light-harvesting complex alpha subunit; antenna complex subunit alpha/beta 227583 4896562 Rsph17029_0209 Rhodobacter sphaeroides ATCC 17029 antenna complex subunit alpha/beta YP_001042100.1 226810 D 349101 CDS YP_001042101.1 126460987 4896066 228028..229242 1 NC_009049.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 229242 4896066 Rsph17029_0210 Rhodobacter sphaeroides ATCC 17029 isocitrate dehydrogenase YP_001042101.1 228028 D 349101 CDS YP_001042102.1 126460988 4897558 complement(229561..230535) 1 NC_009049.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 230535 4897558 Rsph17029_0211 Rhodobacter sphaeroides ATCC 17029 2-dehydropantoate 2-reductase YP_001042102.1 229561 R 349101 CDS YP_001042103.1 126460989 4895293 complement(230532..232067) 1 NC_009049.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_1561 AMP-forming acyl-CoA synthetase/ligase; AMP-dependent synthetase and ligase 232067 4895293 Rsph17029_0212 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001042103.1 230532 R 349101 CDS YP_001042104.1 126460990 4895482 complement(232200..232886) 1 NC_009049.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rsp:RSP_1562 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase 232886 4895482 Rsph17029_0213 Rhodobacter sphaeroides ATCC 17029 fumarylacetoacetate (FAA) hydrolase YP_001042104.1 232200 R 349101 CDS YP_001042105.1 126460991 4895538 complement(232953..233936) 1 NC_009049.1 PFAM: luciferase family protein; KEGG: rsp:RSP_1563 putative oxidoreductase; luciferase family protein 233936 4895538 Rsph17029_0214 Rhodobacter sphaeroides ATCC 17029 luciferase family protein YP_001042105.1 232953 R 349101 CDS YP_001042106.1 126460992 4895797 complement(234013..235233) 1 NC_009049.1 PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_1564 putative transmembrane transport protein; hypothetical protein 235233 4895797 Rsph17029_0215 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042106.1 234013 R 349101 CDS YP_001042107.1 126460993 4895976 complement(235325..236677) 1 NC_009049.1 PFAM: BLUF domain protein; KEGG: rsp:RSP_1565 AppA, antirepressor of PpsR, sensor of blue light; BLUF domain-containing protein 236677 4895976 Rsph17029_0216 Rhodobacter sphaeroides ATCC 17029 BLUF domain-containing protein YP_001042107.1 235325 R 349101 CDS YP_001042108.1 126460994 4896450 237150..237839 1 NC_009049.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rsp:RSP_1566 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 237839 4896450 Rsph17029_0217 Rhodobacter sphaeroides ATCC 17029 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001042108.1 237150 D 349101 CDS YP_001042109.1 126460995 4896592 complement(237873..240440) 1 NC_009049.1 KEGG: rsp:RSP_1567 probable sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 240440 4896592 Rsph17029_0218 Rhodobacter sphaeroides ATCC 17029 multi-sensor hybrid histidine kinase YP_001042109.1 237873 R 349101 CDS YP_001042110.1 126460996 4896627 complement(240508..241902) 1 NC_009049.1 PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_1568 glutamine synthetase; glutamine synthetase 241902 4896627 Rsph17029_0219 Rhodobacter sphaeroides ATCC 17029 glutamine synthetase YP_001042110.1 240508 R 349101 CDS YP_001042111.1 126460997 4896944 complement(241911..243284) 1 NC_009049.1 PFAM: aminotransferase class-III; KEGG: rsp:RSP_1569 glutamate-1-semialdehyde 2,1-aminomutase; aminotransferase 243284 4896944 Rsph17029_0220 Rhodobacter sphaeroides ATCC 17029 aminotransferase YP_001042111.1 241911 R 349101 CDS YP_001042112.1 126460998 4897094 complement(243281..244363) 1 NC_009049.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 244363 4897094 Rsph17029_0221 Rhodobacter sphaeroides ATCC 17029 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001042112.1 243281 R 349101 CDS YP_001042113.1 126460999 4897497 complement(244356..244841) 1 NC_009049.1 KEGG: rsp:RSP_1571 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 244841 4897497 Rsph17029_0222 Rhodobacter sphaeroides ATCC 17029 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001042113.1 244356 R 349101 CDS YP_001042114.1 126461000 4897642 complement(245077..245295) 1 NC_009049.1 PFAM: protein of unknown function DUF465; KEGG: rsp:RSP_6218 hypothetical protein; hypothetical protein 245295 4897642 Rsph17029_0223 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042114.1 245077 R 349101 CDS YP_001042115.1 126461001 4897924 245623..246090 1 NC_009049.1 PFAM: heat shock protein Hsp20; KEGG: rsp:RSP_1572 heat shock protein, HSP20 family; heat shock protein Hsp20 246090 4897924 Rsph17029_0224 Rhodobacter sphaeroides ATCC 17029 heat shock protein Hsp20 YP_001042115.1 245623 D 349101 CDS YP_001042116.1 126461002 4897997 246087..246311 1 NC_009049.1 PFAM: protein of unknown function DUF1150; KEGG: rsp:RSP_1573 hypothetical protein; hypothetical protein 246311 4897997 Rsph17029_0225 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042116.1 246087 D 349101 CDS YP_001042117.1 126461003 4898000 246585..247061 1 NC_009049.1 PFAM: cytochrome B561; KEGG: rsp:RSP_1574 cytochrome b562; cytochrome B561 247061 4898000 Rsph17029_0226 Rhodobacter sphaeroides ATCC 17029 cytochrome B561 YP_001042117.1 246585 D 349101 CDS YP_001042118.1 126461004 4898030 complement(247151..248857) 1 NC_009049.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 248857 4898030 Rsph17029_0227 Rhodobacter sphaeroides ATCC 17029 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase YP_001042118.1 247151 R 349101 CDS YP_001042119.1 126461005 4898031 complement(249049..249987) 1 NC_009049.1 KEGG: rsp:RSP_1576 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 249987 4898031 Rsph17029_0228 Rhodobacter sphaeroides ATCC 17029 thioredoxin reductase YP_001042119.1 249049 R 349101 CDS YP_001042120.1 126461006 4898039 250209..250709 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1577 proline dehydrogenase transcriptional activator; AsnC family transcriptional regulator 250709 4898039 Rsph17029_0229 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001042120.1 250209 D 349101 CDS YP_001042121.1 126461007 4898047 complement(250830..251582) 1 NC_009049.1 PFAM: protein of unknown function DUF152; KEGG: rsp:RSP_1578 conserved hypothetical protein TIGR00726; hypothetical protein 251582 4898047 Rsph17029_0230 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042121.1 250830 R 349101 CDS YP_001042122.1 126461008 4898043 complement(251579..252640) 1 NC_009049.1 PFAM: protein of unknown function DUF185; KEGG: rsp:RSP_1579 hypothetical protein; hypothetical protein 252640 4898043 Rsph17029_0231 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042122.1 251579 R 349101 CDS YP_001042123.1 126461009 4898051 complement(252637..253515) 1 NC_009049.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 253515 4898051 Rsph17029_0232 Rhodobacter sphaeroides ATCC 17029 prolipoprotein diacylglyceryl transferase YP_001042123.1 252637 R 349101 CDS YP_001042124.1 126461010 4898059 253620..253868 1 NC_009049.1 PFAM: protein of unknown function DUF526; KEGG: rsp:RSP_1581 hypothetical protein; hypothetical protein 253868 4898059 Rsph17029_0233 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042124.1 253620 D 349101 CDS YP_001042125.1 126461011 4898067 254288..254557 1 NC_009049.1 KEGG: rsp:RSP_1582 putative sulfate transporter/antisigma-factor antagonist; putative sulfate transporter/antisigma-factor antagonist 254557 4898067 Rsph17029_0234 Rhodobacter sphaeroides ATCC 17029 putative sulfate transporter/antisigma-factor antagonist YP_001042125.1 254288 D 349101 CDS YP_001042126.1 126461012 4898073 254554..254919 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_1583 chemotaxis response regulator, CheY3; response regulator receiver protein 254919 4898073 Rsph17029_0235 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042126.1 254554 D 349101 CDS YP_001042127.1 126461013 4895723 254916..256880 1 NC_009049.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rsp:RSP_1584 chemotaxis histidine protein kinase; CheA signal transduction histidine kinase 256880 4895723 Rsph17029_0236 Rhodobacter sphaeroides ATCC 17029 CheA signal transduction histidine kinase YP_001042127.1 254916 D 349101 CDS YP_001042128.1 126461014 4898021 256877..257368 1 NC_009049.1 PFAM: CheW domain protein; KEGG: rsp:RSP_1585 chemotaxis protein, CheW2; putative CheW protein 257368 4898021 Rsph17029_0237 Rhodobacter sphaeroides ATCC 17029 putative CheW protein YP_001042128.1 256877 D 349101 CDS YP_001042129.1 126461015 4896796 257492..258028 1 NC_009049.1 PFAM: CheW domain protein; KEGG: rsp:RSP_1586 chemotaxis protein, CheW3; putative CheW protein 258028 4896796 Rsph17029_0238 Rhodobacter sphaeroides ATCC 17029 putative CheW protein YP_001042129.1 257492 D 349101 CDS YP_001042130.1 126461016 4896816 258025..258861 1 NC_009049.1 PFAM: MCP methyltransferase, CheR-type; KEGG: rsp:RSP_1587 chemotaxis methyltransferase, CheR2; protein-glutamate O-methyltransferase 258861 4896816 Rsph17029_0239 Rhodobacter sphaeroides ATCC 17029 protein-glutamate O-methyltransferase YP_001042130.1 258025 D 349101 CDS YP_001042131.1 126461017 4896412 258864..259973 1 NC_009049.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rsp:RSP_1588 chemotaxis methylesterase, CheB1; response regulator receiver modulated CheB methylesterase 259973 4896412 Rsph17029_0240 Rhodobacter sphaeroides ATCC 17029 response regulator receiver modulated CheB methylesterase YP_001042131.1 258864 D 349101 CDS YP_001042132.1 126461018 4896068 259970..261712 1 NC_009049.1 KEGG: rsp:RSP_1589 transducer-like protein, TlpC; transducer-like protein, TlpC 261712 4896068 Rsph17029_0241 Rhodobacter sphaeroides ATCC 17029 transducer-like protein, TlpC YP_001042132.1 259970 D 349101 CDS YP_001042133.1 126461019 4897382 261760..262761 1 NC_009049.1 KEGG: rsp:RSP_1591 predicted glutathione S-transferase; glutathione S-transferase 262761 4897382 Rsph17029_0242 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase YP_001042133.1 261760 D 349101 CDS YP_001042134.1 126461020 4897362 complement(262731..264188) 1 NC_009049.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_1590 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 264188 4897362 Rsph17029_0243 Rhodobacter sphaeroides ATCC 17029 two component, sigma54 specific, Fis family transcriptional regulator YP_001042134.1 262731 R 349101 CDS YP_001042135.1 126461021 4897675 complement(264185..264736) 1 NC_009049.1 KEGG: rsp:RSP_6007 hypothetical protein; hypothetical protein 264736 4897675 Rsph17029_0244 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042135.1 264185 R 349101 CDS YP_001042136.1 126461022 4897609 complement(264972..266864) 1 NC_009049.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_1592 possible acyl-CoA sythetase; AMP-dependent synthetase and ligase 266864 4897609 Rsph17029_0245 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001042136.1 264972 R 349101 CDS YP_001042137.1 126461023 4896567 complement(267025..269304) 1 NC_009049.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 269304 4896567 Rsph17029_0246 Rhodobacter sphaeroides ATCC 17029 malic enzyme YP_001042137.1 267025 R 349101 CDS YP_001042138.1 126461024 4897665 269515..269907 1 NC_009049.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rsp:RSP_1594 cytidine deaminase; cytidine deaminase 269907 4897665 Rsph17029_0247 Rhodobacter sphaeroides ATCC 17029 cytidine deaminase YP_001042138.1 269515 D 349101 CDS YP_001042139.1 126461025 4897868 269909..271216 1 NC_009049.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 271216 deoA 4897868 deoA Rhodobacter sphaeroides ATCC 17029 thymidine phosphorylase YP_001042139.1 269909 D 349101 CDS YP_001042140.1 126461026 4895561 271216..272412 1 NC_009049.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 272412 4895561 Rsph17029_0249 Rhodobacter sphaeroides ATCC 17029 phosphopentomutase YP_001042140.1 271216 D 349101 CDS YP_001042141.1 126461027 4896012 272409..273392 1 NC_009049.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 273392 4896012 Rsph17029_0250 Rhodobacter sphaeroides ATCC 17029 adenosine deaminase YP_001042141.1 272409 D 349101 CDS YP_001042142.1 126461028 4896505 273385..274017 1 NC_009049.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 274017 upp 4896505 upp Rhodobacter sphaeroides ATCC 17029 uracil phosphoribosyltransferase YP_001042142.1 273385 D 349101 CDS YP_001042143.1 126461029 4896425 274084..275031 1 NC_009049.1 PFAM: Sporulation domain protein; KEGG: rsp:RSP_6008 hypothetical protein; sporulation domain-containing protein 275031 4896425 Rsph17029_0252 Rhodobacter sphaeroides ATCC 17029 sporulation domain-containing protein YP_001042143.1 274084 D 349101 CDS YP_001042144.1 126461030 4897198 complement(275178..276197) 1 NC_009049.1 KEGG: rsp:RSP_6009 hypothetical protein; hypothetical protein 276197 4897198 Rsph17029_0253 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042144.1 275178 R 349101 CDS YP_001042145.1 126461031 4897994 complement(276278..277927) 1 NC_009049.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_1599 AMP-binding protein; AMP-dependent synthetase and ligase 277927 4897994 Rsph17029_0254 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001042145.1 276278 R 349101 CDS YP_001042146.1 126461032 4898015 278026..278958 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1600 possible transporter, DME family, DMT superfamily; hypothetical protein 278958 4898015 Rsph17029_0255 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042146.1 278026 D 349101 CDS YP_001042147.1 126461033 4898028 complement(278962..279591) 1 NC_009049.1 PFAM: Methyltransferase type 11; KEGG: rsp:RSP_1601 hypothetical protein; type 11 methyltransferase 279591 4898028 Rsph17029_0256 Rhodobacter sphaeroides ATCC 17029 type 11 methyltransferase YP_001042147.1 278962 R 349101 CDS YP_001042148.1 126461034 4898038 complement(279765..281036) 1 NC_009049.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1602 TRAP-T family transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM 281036 4898038 Rsph17029_0257 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001042148.1 279765 R 349101 CDS YP_001042149.1 126461035 4898050 complement(281061..281546) 1 NC_009049.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_1604 TRAP-T family transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ 281546 4898050 Rsph17029_0258 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001042149.1 281061 R 349101 CDS YP_001042150.1 126461036 4898041 complement(281616..282590) 1 NC_009049.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_1605 TRAP-T family transporter, periplasmic binding protein, DctP; TRAP dicarboxylate transporter- DctP subunit 282590 4898041 Rsph17029_0259 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001042150.1 281616 R 349101 CDS YP_001042151.1 126461037 4898074 complement(282614..283315) 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1606 putative regulatory protein, GntR family; GntR family transcriptional regulator 283315 4898074 Rsph17029_0260 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001042151.1 282614 R 349101 CDS YP_001042152.1 126461038 4898076 complement(283428..284330) 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1607 putative regulatory protein, GntR family; GntR family transcriptional regulator 284330 4898076 Rsph17029_0261 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001042152.1 283428 R 349101 CDS YP_001042153.1 126461039 4895281 284471..285454 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1608 putative Zn-dependent dehydrogenase; alcohol dehydrogenase 285454 4895281 Rsph17029_0262 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001042153.1 284471 D 349101 CDS YP_001042154.1 126461040 4895257 285447..286547 1 NC_009049.1 PFAM: Mannitol dehydrogenase, C-terminal domain; KEGG: rsp:RSP_1609 putative altronate dehydrogenase; mannitol dehydrogenase domain-containing protein 286547 4895257 Rsph17029_0263 Rhodobacter sphaeroides ATCC 17029 mannitol dehydrogenase domain-containing protein YP_001042154.1 285447 D 349101 CDS YP_001042155.1 126461041 4896561 286544..288046 1 NC_009049.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: rsp:RSP_1610 altronate hydrolase; altronate dehydratase 288046 4896561 Rsph17029_0264 Rhodobacter sphaeroides ATCC 17029 altronate dehydratase YP_001042155.1 286544 D 349101 CDS YP_001042156.1 126461042 4896774 288123..289916 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1611 sensor histidine kinase; histidine kinase 289916 4896774 Rsph17029_0265 Rhodobacter sphaeroides ATCC 17029 histidine kinase YP_001042156.1 288123 D 349101 CDS YP_001042157.1 126461043 4895844 289913..291232 1 NC_009049.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_1612 sigma-54 dependent transcriptional regulator; two component, sigma54 specific, Fis family transcriptional regulator 291232 4895844 Rsph17029_0266 Rhodobacter sphaeroides ATCC 17029 two component, sigma54 specific, Fis family transcriptional regulator YP_001042157.1 289913 D 349101 CDS YP_001042158.1 126461044 4895802 291443..292396 1 NC_009049.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rsp:RSP_1613 TRAP-T family transporter, DctP subunit; TRAP transporter solute receptor TAXI family protein 292396 4895802 Rsph17029_0267 Rhodobacter sphaeroides ATCC 17029 TRAP transporter solute receptor TAXI family protein YP_001042158.1 291443 D 349101 CDS YP_001042159.1 126461045 4895228 292500..293594 1 NC_009049.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1614 TRAP-T family transporter with fused DctQ/DctM subunits; TRAP transporter, 4TM/12TM fusion protein 293594 4895228 Rsph17029_0268 Rhodobacter sphaeroides ATCC 17029 TRAP transporter, 4TM/12TM fusion protein YP_001042159.1 292500 D 349101 CDS YP_001042160.1 126461046 4895609 293667..294617 1 NC_009049.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1614 TRAP-T family transporter with fused DctQ/DctM subunits; TRAP dicarboxylate transporter subunit DctM 294617 4895609 Rsph17029_0269 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001042160.1 293667 D 349101 CDS YP_001042161.1 126461047 4895705 294614..294982 1 NC_009049.1 KEGG: rsp:RSP_1615 hypothetical protein; hypothetical protein 294982 4895705 Rsph17029_0270 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042161.1 294614 D 349101 CDS YP_001042162.1 126461048 4896940 296073..296789 1 NC_009049.1 hypothetical protein 296789 4896940 Rsph17029_0272 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042162.1 296073 D 349101 CDS YP_001042163.1 126461049 4897815 297607..297867 1 NC_009049.1 hypothetical protein 297867 4897815 Rsph17029_0273 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042163.1 297607 D 349101 CDS YP_001042164.1 126461050 4896380 297943..299121 1 NC_009049.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: nwi:Nwi_1628 phage portal protein, HK97; HK97 family phage portal protein 299121 4896380 Rsph17029_0274 Rhodobacter sphaeroides ATCC 17029 HK97 family phage portal protein YP_001042164.1 297943 D 349101 CDS YP_001042165.1 126461051 4896310 299111..299506 1 NC_009049.1 KEGG: nwi:Nwi_1627 hypothetical protein; hypothetical protein 299506 4896310 Rsph17029_0275 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042165.1 299111 D 349101 CDS YP_001042166.1 126461052 4896959 299506..300012 1 NC_009049.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: nha:Nham_2490 peptidase U35, phage prohead HK97; HK97 family phage prohead protease 300012 4896959 Rsph17029_0276 Rhodobacter sphaeroides ATCC 17029 HK97 family phage prohead protease YP_001042166.1 299506 D 349101 CDS YP_001042167.1 126461053 4896429 300012..301169 1 NC_009049.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: nwi:Nwi_1625 phage major capsid protein, HK97; HK97 family phage major capsid protein 301169 4896429 Rsph17029_0277 Rhodobacter sphaeroides ATCC 17029 HK97 family phage major capsid protein YP_001042167.1 300012 D 349101 CDS YP_001042168.1 126461054 4897995 301182..301559 1 NC_009049.1 KEGG: nha:Nham_2488 hypothetical protein; hypothetical protein 301559 4897995 Rsph17029_0278 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042168.1 301182 D 349101 CDS YP_001042169.1 126461055 4897998 301562..301921 1 NC_009049.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsp:RSP_2355 HNH nuclease / probable phage PHI-105 holin-like protein; HNH endonuclease 301921 4897998 Rsph17029_0279 Rhodobacter sphaeroides ATCC 17029 HNH endonuclease YP_001042169.1 301562 D 349101 CDS YP_001042170.1 126461056 4898014 301918..302391 1 NC_009049.1 KEGG: mes:Meso_1894 hypothetical protein; hypothetical protein 302391 4898014 Rsph17029_0280 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042170.1 301918 D 349101 CDS YP_001042171.1 126461057 4897246 302396..302824 1 NC_009049.1 hypothetical protein 302824 4897246 Rsph17029_0281 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042171.1 302396 D 349101 CDS YP_001042172.1 126461058 4897686 302821..303135 1 NC_009049.1 KEGG: nwi:Nwi_1622 uncharacterized phage protein (possible DNA packaging); phage protein 303135 4897686 Rsph17029_0282 Rhodobacter sphaeroides ATCC 17029 phage protein YP_001042172.1 302821 D 349101 CDS YP_001042173.1 126461059 4898071 303135..303548 1 NC_009049.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: nwi:Nwi_1621 phage protein, HK97, GP10; HK97 family phage protein 303548 4898071 Rsph17029_0283 Rhodobacter sphaeroides ATCC 17029 HK97 family phage protein YP_001042173.1 303135 D 349101 CDS YP_001042174.1 126461060 4898055 303545..303958 1 NC_009049.1 KEGG: nwi:Nwi_1620 hypothetical protein; hypothetical protein 303958 4898055 Rsph17029_0284 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042174.1 303545 D 349101 CDS YP_001042175.1 126461061 4895548 303958..304281 1 NC_009049.1 PFAM: phage head-tail adaptor, putative; KEGG: nwi:Nwi_1619 phage head-tail adaptor, putative; phage head-tail adaptor 304281 4895548 Rsph17029_0285 Rhodobacter sphaeroides ATCC 17029 phage head-tail adaptor YP_001042175.1 303958 D 349101 CDS YP_001042176.1 126461062 4898075 304281..304715 1 NC_009049.1 TIGRFAM: phage terminase, small subunit, putative, P27 family; PFAM: phage terminase, small subunit, putative, P27; KEGG: nwi:Nwi_1473 phage terminase, small subunit, putative, P27; P27 family phage terminase small subunit 304715 4898075 Rsph17029_0286 Rhodobacter sphaeroides ATCC 17029 P27 family phage terminase small subunit YP_001042176.1 304281 D 349101 CDS YP_001042177.1 126461063 4895311 304712..306319 1 NC_009049.1 PFAM: phage Terminase; KEGG: nwi:Nwi_1472 phage terminase; phage terminase 306319 4895311 Rsph17029_0287 Rhodobacter sphaeroides ATCC 17029 phage terminase YP_001042177.1 304712 D 349101 CDS YP_001042178.1 126461064 4895559 306330..308675 1 NC_009049.1 KEGG: rsp:RSP_2351 hypothetical protein; hypothetical protein 308675 4895559 Rsph17029_0288 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042178.1 306330 D 349101 CDS YP_001042179.1 126461065 4895390 308675..309031 1 NC_009049.1 KEGG: nwi:Nwi_1614 hypothetical protein; hypothetical protein 309031 4895390 Rsph17029_0289 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042179.1 308675 D 349101 CDS YP_001042180.1 126461066 4896711 310583..310933 1 NC_009049.1 hypothetical protein 310933 4896711 Rsph17029_0290 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042180.1 310583 D 349101 CDS YP_001042181.1 126461067 4895833 310936..311286 1 NC_009049.1 hypothetical protein 311286 4895833 Rsph17029_0291 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042181.1 310936 D 349101 CDS YP_001042182.1 126461068 4895196 311713..312777 1 NC_009049.1 PFAM: phage integrase family protein; KEGG: gox:GOX2318 prophage integrase; phage integrase family protein 312777 4895196 Rsph17029_0292 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001042182.1 311713 D 349101 CDS YP_001042183.1 126461069 4897024 complement(313218..313676) 1 NC_009049.1 KEGG: rsp:RSP_1618 hypothetical protein; hypothetical protein 313676 4897024 Rsph17029_0294 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042183.1 313218 R 349101 CDS YP_001042184.1 126461070 4896886 314475..315512 1 NC_009049.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1663 putative transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator 315512 4896886 Rsph17029_0296 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001042184.1 314475 D 349101 CDS YP_001042185.1 126461071 4895706 complement(315519..315971) 1 NC_009049.1 KEGG: rsp:RSP_1664 hypothetical protein; hypothetical protein 315971 4895706 Rsph17029_0297 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042185.1 315519 R 349101 CDS YP_001042186.1 126461072 4895298 complement(315968..316576) 1 NC_009049.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rsp:RSP_1665 putative RhtB family transporter; lysine exporter protein LysE/YggA 316576 4895298 Rsph17029_0298 Rhodobacter sphaeroides ATCC 17029 lysine exporter protein LysE/YggA YP_001042186.1 315968 R 349101 CDS YP_001042187.1 126461073 4897711 complement(316587..317546) 1 NC_009049.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 317546 ispH 4897711 ispH Rhodobacter sphaeroides ATCC 17029 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001042187.1 316587 R 349101 CDS YP_001042188.1 126461074 4897855 complement(317697..318269) 1 NC_009049.1 PFAM: protein of unknown function DUF88; KEGG: rsp:RSP_1667 hypothetical protein; hypothetical protein 318269 4897855 Rsph17029_0300 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042188.1 317697 R 349101 CDS YP_001042189.1 126461075 4895284 318459..318995 1 NC_009049.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: rsp:RSP_1668 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 318995 4895284 Rsph17029_0301 Rhodobacter sphaeroides ATCC 17029 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001042189.1 318459 D 349101 CDS YP_001042190.1 126461076 4895766 319080..319433 1 NC_009049.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 319433 4895766 Rsph17029_0302 Rhodobacter sphaeroides ATCC 17029 DNA-directed RNA polymerase subunit omega YP_001042190.1 319080 D 349101 CDS YP_001042191.1 126461077 4896333 319464..321581 1 NC_009049.1 KEGG: rsp:RSP_1670 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 321581 4896333 Rsph17029_0303 Rhodobacter sphaeroides ATCC 17029 (p)ppGpp synthetase I SpoT/RelA YP_001042191.1 319464 D 349101 CDS YP_001042192.1 126461078 4895519 321598..322254 1 NC_009049.1 KEGG: rsp:RSP_1671 hypothetical protein; hypothetical protein 322254 4895519 Rsph17029_0304 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042192.1 321598 D 349101 CDS YP_001042193.1 126461079 4896643 322291..323049 1 NC_009049.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 323049 4896643 Rsph17029_0305 Rhodobacter sphaeroides ATCC 17029 pyridoxine 5'-phosphate synthase YP_001042193.1 322291 D 349101 CDS YP_001042194.1 126461080 4896039 323081..323494 1 NC_009049.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 323494 acpS 4896039 acpS Rhodobacter sphaeroides ATCC 17029 4'-phosphopantetheinyl transferase YP_001042194.1 323081 D 349101 CDS YP_001042195.1 126461081 4896775 323566..324354 1 NC_009049.1 KEGG: rsp:RSP_1674 type 1 signal peptidase; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 324354 4896775 Rsph17029_0307 Rhodobacter sphaeroides ATCC 17029 signal peptidase I YP_001042195.1 323566 D 349101 CDS YP_001042196.1 126461082 4896639 324351..325040 1 NC_009049.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rsp:RSP_1675 ribonuclease III; ribonuclease III 325040 4896639 Rsph17029_0308 Rhodobacter sphaeroides ATCC 17029 ribonuclease III YP_001042196.1 324351 D 349101 CDS YP_001042197.1 126461083 4895460 325033..325947 1 NC_009049.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 325947 era 4895460 era Rhodobacter sphaeroides ATCC 17029 GTP-binding protein Era YP_001042197.1 325033 D 349101 CDS YP_001042198.1 126461084 4895506 325969..326304 1 NC_009049.1 PFAM: protein of unknown function DUF1491; KEGG: rsp:RSP_1677 hypothetical protein; hypothetical protein 326304 4895506 Rsph17029_0310 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042198.1 325969 D 349101 CDS YP_001042199.1 126461085 4896967 326341..327060 1 NC_009049.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 327060 recO 4896967 recO Rhodobacter sphaeroides ATCC 17029 DNA repair protein RecO YP_001042199.1 326341 D 349101 CDS YP_001042200.1 126461086 4896571 complement(327100..328767) 1 NC_009049.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_1679 acyl-CoA dehydrogenase; isovaleryl-CoA dehydrogenase 328767 4896571 Rsph17029_0312 Rhodobacter sphaeroides ATCC 17029 isovaleryl-CoA dehydrogenase YP_001042200.1 327100 R 349101 CDS YP_001042201.1 126461087 4896517 complement(329491..331089) 1 NC_009049.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 331089 4896517 Rsph17029_0313 Rhodobacter sphaeroides ATCC 17029 phosphoenolpyruvate carboxykinase YP_001042201.1 329491 R 349101 CDS YP_001042202.1 126461088 4895072 331428..332129 1 NC_009049.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1681 two-component transcriptional regulator, winged helix family; two component transcriptional regulator 332129 4895072 Rsph17029_0314 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001042202.1 331428 D 349101 CDS YP_001042203.1 126461089 4896303 332152..333870 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1682 two-component sensor histidine kinase; histidine kinase 333870 4896303 Rsph17029_0315 Rhodobacter sphaeroides ATCC 17029 histidine kinase YP_001042203.1 332152 D 349101 CDS YP_001042204.1 126461090 4896287 333867..334295 1 NC_009049.1 KEGG: rsp:RSP_1683 putative kinase/phosphatase; HPr kinase 334295 4896287 Rsph17029_0316 Rhodobacter sphaeroides ATCC 17029 HPr kinase YP_001042204.1 333867 D 349101 CDS YP_001042205.1 126461091 4896210 334317..335225 1 NC_009049.1 PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: rsp:RSP_1684 hypothetical protein; hypothetical protein 335225 4896210 Rsph17029_0317 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042205.1 334317 D 349101 CDS YP_001042206.1 126461092 4896708 335222..335620 1 NC_009049.1 PFAM: PTS system fructose subfamily IIA component; KEGG: rsp:RSP_1685 PTS system, IIA component; PTS system fructose subfamily transporter subunit IIA 335620 4896708 Rsph17029_0318 Rhodobacter sphaeroides ATCC 17029 PTS system fructose subfamily transporter subunit IIA YP_001042206.1 335222 D 349101 CDS YP_001042207.1 126461093 4895730 335617..335886 1 NC_009049.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rsp:RSP_1686 putative phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr 335886 4895730 Rsph17029_0319 Rhodobacter sphaeroides ATCC 17029 phosphotransferase system, phosphocarrier protein HPr YP_001042207.1 335617 D 349101 CDS YP_001042208.1 126461094 4895347 336030..337127 1 NC_009049.1 PFAM: acyltransferase 3; KEGG: rsp:RSP_1688 possible acyltransferase; acyltransferase 3 337127 4895347 Rsph17029_0320 Rhodobacter sphaeroides ATCC 17029 acyltransferase 3 YP_001042208.1 336030 D 349101 CDS YP_001042209.1 126461095 4896086 complement(337094..337969) 1 NC_009049.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 337969 4896086 Rsph17029_0321 Rhodobacter sphaeroides ATCC 17029 3-hydroxybutyryl-CoA dehydrogenase YP_001042209.1 337094 R 349101 CDS YP_001042210.1 126461096 4896135 338138..338962 1 NC_009049.1 KEGG: rsp:RSP_1689 hypothetical protein; hypothetical protein 338962 4896135 Rsph17029_0322 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042210.1 338138 D 349101 CDS YP_001042211.1 126461097 4896158 complement(339012..339938) 1 NC_009049.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: rsp:RSP_1690 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 339938 4896158 Rsph17029_0323 Rhodobacter sphaeroides ATCC 17029 electron transfer flavoprotein subunit alpha YP_001042211.1 339012 R 349101 CDS YP_001042212.1 126461098 4896077 complement(339938..340699) 1 NC_009049.1 PFAM: electron transfer flavoprotein beta-subunit; KEGG: rsp:RSP_1691 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 340699 4896077 Rsph17029_0324 Rhodobacter sphaeroides ATCC 17029 electron transfer flavoprotein subunit beta YP_001042212.1 339938 R 349101 CDS YP_001042213.1 126461099 4895674 complement(340830..341408) 1 NC_009049.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rsp:RSP_1692 hypothetical protein; ATP--cobalamin adenosyltransferase 341408 4895674 Rsph17029_0325 Rhodobacter sphaeroides ATCC 17029 ATP--cobalamin adenosyltransferase YP_001042213.1 340830 R 349101 CDS YP_001042214.1 126461100 4895434 complement(341408..341617) 1 NC_009049.1 KEGG: rsp:RSP_6016 hypothetical protein; hypothetical protein 341617 4895434 Rsph17029_0326 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042214.1 341408 R 349101 CDS YP_001042215.1 126461101 4895756 complement(341785..342600) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1694 probable short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 342600 4895756 Rsph17029_0327 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001042215.1 341785 R 349101 CDS YP_001042216.1 126461102 4895856 complement(342900..343460) 1 NC_009049.1 PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: rsp:RSP_1695 hypothetical protein; SH3 type 3 domain-containing protein 343460 4895856 Rsph17029_0328 Rhodobacter sphaeroides ATCC 17029 SH3 type 3 domain-containing protein YP_001042216.1 342900 R 349101 CDS YP_001042217.1 126461103 4895913 343594..345897 1 NC_009049.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 345897 4895913 Rsph17029_0329 Rhodobacter sphaeroides ATCC 17029 DNA topoisomerase IV subunit A YP_001042217.1 343594 D 349101 CDS YP_001042218.1 126461104 4895908 346055..346630 1 NC_009049.1 KEGG: rsp:RSP_1697 hypothetical protein; hypothetical protein 346630 4895908 Rsph17029_0330 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042218.1 346055 D 349101 CDS YP_001042219.1 126461105 4895847 346731..347906 1 NC_009049.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 347906 4895847 Rsph17029_0331 Rhodobacter sphaeroides ATCC 17029 elongation factor Tu YP_001042219.1 346731 D 349101 CDS YP_001042220.1 126461106 4896673 348074..348718 1 NC_009049.1 KEGG: rsp:RSP_1706 putative acetyltransferase; putative acetyltransferase 348718 4896673 Rsph17029_0332 Rhodobacter sphaeroides ATCC 17029 putative acetyltransferase YP_001042220.1 348074 D 349101 CDS YP_001042221.1 126461107 4897935 348961..349155 1 NC_009049.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 349155 secE 4897935 secE Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecE YP_001042221.1 348961 D 349101 CDS YP_001042222.1 126461108 4896693 349318..349851 1 NC_009049.1 KEGG: rsp:RSP_1704 probable transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 349851 4896693 Rsph17029_0334 Rhodobacter sphaeroides ATCC 17029 NusG antitermination factor YP_001042222.1 349318 D 349101 CDS YP_001042223.1 126461109 4896683 349944..350396 1 NC_009049.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 350396 rplK 4896683 rplK Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L11 YP_001042223.1 349944 D 349101 CDS YP_001042224.1 126461110 4897332 350400..351098 1 NC_009049.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 351098 rplA 4897332 rplA Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L1 YP_001042224.1 350400 D 349101 CDS YP_001042225.1 126461111 4897536 351337..351852 1 NC_009049.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 351852 rplJ 4897536 rplJ Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L10 YP_001042225.1 351337 D 349101 CDS YP_001042226.1 126461112 4896022 351922..352299 1 NC_009049.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 352299 rplL 4896022 rplL Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L7/L12 YP_001042226.1 351922 D 349101 CDS YP_001042227.1 126461113 4896030 352544..356677 1 NC_009049.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 356677 rpoB 4896030 rpoB Rhodobacter sphaeroides ATCC 17029 DNA-directed RNA polymerase subunit beta YP_001042227.1 352544 D 349101 CDS YP_001042228.1 126461114 4896029 356759..361006 1 NC_009049.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 361006 4896029 Rsph17029_0340 Rhodobacter sphaeroides ATCC 17029 DNA-directed RNA polymerase subunit beta' YP_001042228.1 356759 D 349101 CDS YP_001042229.1 126461115 4897504 361198..362124 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1711 possible transporter, RhaT family, DMT superfamily; hypothetical protein 362124 4897504 Rsph17029_0341 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042229.1 361198 D 349101 CDS YP_001042230.1 126461116 4895887 362337..362708 1 NC_009049.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 362708 rpsL 4895887 rpsL Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S12 YP_001042230.1 362337 D 349101 CDS YP_001042231.1 126461117 4897139 362721..363191 1 NC_009049.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 363191 4897139 Rsph17029_0343 Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S7 YP_001042231.1 362721 D 349101 CDS YP_001042232.1 126461118 4897133 363216..365333 1 NC_009049.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 365333 4897133 Rsph17029_0344 Rhodobacter sphaeroides ATCC 17029 elongation factor G YP_001042232.1 363216 D 349101 CDS YP_001042233.1 126461119 4895253 365408..366583 1 NC_009049.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 366583 4895253 Rsph17029_0345 Rhodobacter sphaeroides ATCC 17029 elongation factor Tu YP_001042233.1 365408 D 349101 CDS YP_001042234.1 126461120 4895408 366751..367395 1 NC_009049.1 KEGG: rsp:RSP_1706 putative acetyltransferase; putative acetyltransferase 367395 4895408 Rsph17029_0346 Rhodobacter sphaeroides ATCC 17029 putative acetyltransferase YP_001042234.1 366751 D 349101 CDS YP_001042235.1 126461121 4895911 367638..367832 1 NC_009049.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 367832 secE 4895911 secE Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecE YP_001042235.1 367638 D 349101 CDS YP_001042236.1 126461122 4895948 367995..368528 1 NC_009049.1 KEGG: rsp:RSP_1704 probable transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 368528 4895948 Rsph17029_0348 Rhodobacter sphaeroides ATCC 17029 NusG antitermination factor YP_001042236.1 367995 D 349101 CDS YP_001042237.1 126461123 4895740 368621..369073 1 NC_009049.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 369073 rplK 4895740 rplK Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L11 YP_001042237.1 368621 D 349101 CDS YP_001042238.1 126461124 4895073 369077..369775 1 NC_009049.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 369775 rplA 4895073 rplA Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L1 YP_001042238.1 369077 D 349101 CDS YP_001042239.1 126461125 4895166 370014..370529 1 NC_009049.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 370529 rplJ 4895166 rplJ Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L10 YP_001042239.1 370014 D 349101 CDS YP_001042240.1 126461126 4897047 370599..370976 1 NC_009049.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 370976 rplL 4897047 rplL Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L7/L12 YP_001042240.1 370599 D 349101 CDS YP_001042241.1 126461127 4897688 371221..375354 1 NC_009049.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 375354 rpoB 4897688 rpoB Rhodobacter sphaeroides ATCC 17029 DNA-directed RNA polymerase subunit beta YP_001042241.1 371221 D 349101 CDS YP_001042242.1 126461128 4896241 375436..379683 1 NC_009049.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 379683 4896241 Rsph17029_0354 Rhodobacter sphaeroides ATCC 17029 DNA-directed RNA polymerase subunit beta' YP_001042242.1 375436 D 349101 CDS YP_001042243.1 126461129 4896105 379875..380801 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1711 possible transporter, RhaT family, DMT superfamily; hypothetical protein 380801 4896105 Rsph17029_0355 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042243.1 379875 D 349101 CDS YP_001042244.1 126461130 4896637 381014..381385 1 NC_009049.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 381385 rpsL 4896637 rpsL Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S12 YP_001042244.1 381014 D 349101 CDS YP_001042245.1 126461131 4896437 381398..381868 1 NC_009049.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 381868 4896437 Rsph17029_0357 Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S7 YP_001042245.1 381398 D 349101 CDS YP_001042246.1 126461132 4895140 381893..384010 1 NC_009049.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 384010 4895140 Rsph17029_0358 Rhodobacter sphaeroides ATCC 17029 elongation factor G YP_001042246.1 381893 D 349101 CDS YP_001042247.1 126461133 4896590 384085..385260 1 NC_009049.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 385260 4896590 Rsph17029_0359 Rhodobacter sphaeroides ATCC 17029 elongation factor Tu YP_001042247.1 384085 D 349101 CDS YP_001042248.1 126461134 4895640 385333..385641 1 NC_009049.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 385641 rpsJ 4895640 rpsJ Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S10 YP_001042248.1 385333 D 349101 CDS YP_001042249.1 126461135 4896020 385655..386377 1 NC_009049.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 386377 rplC 4896020 rplC Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L3 YP_001042249.1 385655 D 349101 CDS YP_001042250.1 126461136 4896982 386367..386987 1 NC_009049.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 386987 rplD 4896982 rplD Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L4 YP_001042250.1 386367 D 349101 CDS YP_001042251.1 126461137 4896108 386984..387280 1 NC_009049.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 387280 rplW 4896108 rplW Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L23 YP_001042251.1 386984 D 349101 CDS YP_001042252.1 126461138 4896298 387403..388242 1 NC_009049.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 388242 rplB 4896298 rplB Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L2 YP_001042252.1 387403 D 349101 CDS YP_001042253.1 126461139 4896136 388246..388524 1 NC_009049.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 388524 rpsS 4896136 rpsS Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S19 YP_001042253.1 388246 D 349101 CDS YP_001042254.1 126461140 4895286 388528..388908 1 NC_009049.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 388908 rplV 4895286 rplV Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L22 YP_001042254.1 388528 D 349101 CDS YP_001042255.1 126461141 4895785 388908..389624 1 NC_009049.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 389624 rpsC 4895785 rpsC Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S3 YP_001042255.1 388908 D 349101 CDS YP_001042256.1 126461142 4896084 389639..390052 1 NC_009049.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 390052 rplP 4896084 rplP Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L16 YP_001042256.1 389639 D 349101 CDS YP_001042257.1 126461143 4895870 390291..390497 1 NC_009049.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 390497 4895870 Rsph17029_0369 Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L29 YP_001042257.1 390291 D 349101 CDS YP_001042258.1 126461144 4896007 390511..390753 1 NC_009049.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 390753 rpsQ 4896007 rpsQ Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S17 YP_001042258.1 390511 D 349101 CDS YP_001042259.1 126461145 4896691 390827..391195 1 NC_009049.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 391195 rplN 4896691 rplN Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L14 YP_001042259.1 390827 D 349101 CDS YP_001042260.1 126461146 4896518 391195..391500 1 NC_009049.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 391500 rplX 4896518 rplX Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L24 YP_001042260.1 391195 D 349101 CDS YP_001042261.1 126461147 4895907 391500..392060 1 NC_009049.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 392060 rplE 4895907 rplE Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L5 YP_001042261.1 391500 D 349101 CDS YP_001042262.1 126461148 4896031 392080..392385 1 NC_009049.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 392385 rpsN 4896031 rpsN Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S14 YP_001042262.1 392080 D 349101 CDS YP_001042263.1 126461149 4895942 392398..392796 1 NC_009049.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 392796 rpsH 4895942 rpsH Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S8 YP_001042263.1 392398 D 349101 CDS YP_001042264.1 126461150 4895918 392807..393340 1 NC_009049.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 393340 rplF 4895918 rplF Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L6 YP_001042264.1 392807 D 349101 CDS YP_001042265.1 126461151 4896507 393352..393711 1 NC_009049.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 393711 rplR 4896507 rplR Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L18 YP_001042265.1 393352 D 349101 CDS YP_001042266.1 126461152 4896583 393723..394286 1 NC_009049.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 394286 rpsE 4896583 rpsE Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S5 YP_001042266.1 393723 D 349101 CDS YP_001042267.1 126461153 4898079 394299..394487 1 NC_009049.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 394487 rpmD 4898079 rpmD Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L30 YP_001042267.1 394299 D 349101 CDS YP_001042268.1 126461154 4896797 394644..395129 1 NC_009049.1 late assembly protein; 50S ribosomal protein L15 395129 rplO 4896797 rplO Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L15 YP_001042268.1 394644 D 349101 CDS YP_001042269.1 126461155 4896324 395230..396588 1 NC_009049.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 396588 secY 4896324 secY Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecY YP_001042269.1 395230 D 349101 CDS YP_001042270.1 126461156 4895830 396599..397252 1 NC_009049.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 397252 adk 4895830 adk Rhodobacter sphaeroides ATCC 17029 adenylate kinase YP_001042270.1 396599 D 349101 CDS YP_001042271.1 126461157 4896804 397427..397795 1 NC_009049.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 397795 rpsM 4896804 rpsM Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S13 YP_001042271.1 397427 D 349101 CDS YP_001042272.1 126461158 4897219 397809..398198 1 NC_009049.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 398198 4897219 Rsph17029_0384 Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S11 YP_001042272.1 397809 D 349101 CDS YP_001042273.1 126461159 4895715 398314..399330 1 NC_009049.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 399330 4895715 Rsph17029_0385 Rhodobacter sphaeroides ATCC 17029 DNA-directed RNA polymerase subunit alpha YP_001042273.1 398314 D 349101 CDS YP_001042274.1 126461160 4896439 399431..399850 1 NC_009049.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 399850 rplQ 4896439 rplQ Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L17 YP_001042274.1 399431 D 349101 CDS YP_001042275.1 126461161 4897583 400109..400720 1 NC_009049.1 PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: rsp:RSP_1741 possible LuxR family protein; response regulator receiver protein 400720 4897583 Rsph17029_0387 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042275.1 400109 D 349101 CDS YP_001042276.1 126461162 4897569 400776..402161 1 NC_009049.1 KEGG: rsp:RSP_1742 serine protease, trypsin family; TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; protease Do 402161 4897569 Rsph17029_0388 Rhodobacter sphaeroides ATCC 17029 protease Do YP_001042276.1 400776 D 349101 CDS YP_001042277.1 126461163 4895188 402200..403513 1 NC_009049.1 PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_1743 ATPase, AAA family; recombination factor protein RarA 403513 4895188 Rsph17029_0389 Rhodobacter sphaeroides ATCC 17029 recombination factor protein RarA YP_001042277.1 402200 D 349101 CDS YP_001042278.1 126461164 4895391 403545..403919 1 NC_009049.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 403919 4895391 Rsph17029_0390 Rhodobacter sphaeroides ATCC 17029 camphor resistance protein CrcB YP_001042278.1 403545 D 349101 CDS YP_001042279.1 126461165 4895490 403916..404956 1 NC_009049.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rsp:RSP_1745 pseudouridine synthase; RluA family pseudouridine synthase 404956 4895490 Rsph17029_0391 Rhodobacter sphaeroides ATCC 17029 RluA family pseudouridine synthase YP_001042279.1 403916 D 349101 CDS YP_001042280.1 126461166 4895614 404956..405663 1 NC_009049.1 PFAM: ATP12 ATPase; KEGG: rsp:RSP_1746 hypothetical protein; ATP12 ATPase 405663 4895614 Rsph17029_0392 Rhodobacter sphaeroides ATCC 17029 ATP12 ATPase YP_001042280.1 404956 D 349101 CDS YP_001042281.1 126461167 4895636 405890..406906 1 NC_009049.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_1747 ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein; cationic amino acid ABC transporter substrate-binding protein 406906 4895636 Rsph17029_0393 Rhodobacter sphaeroides ATCC 17029 cationic amino acid ABC transporter substrate-binding protein YP_001042281.1 405890 D 349101 CDS YP_001042282.1 126461168 4895729 407055..408317 1 NC_009049.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1748 ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB; polar amino acid ABC transporter inner membrane subunit 408317 4895729 Rsph17029_0394 Rhodobacter sphaeroides ATCC 17029 polar amino acid ABC transporter inner membrane subunit YP_001042282.1 407055 D 349101 CDS YP_001042283.1 126461169 4895676 408319..409647 1 NC_009049.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1749 ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; polar amino acid ABC transporter inner membrane subunit 409647 4895676 Rsph17029_0395 Rhodobacter sphaeroides ATCC 17029 polar amino acid ABC transporter inner membrane subunit YP_001042283.1 408319 D 349101 CDS YP_001042284.1 126461170 4895924 409660..410448 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1750 ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit BztD; ABC transporter 410448 4895924 Rsph17029_0396 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042284.1 409660 D 349101 CDS YP_001042285.1 126461171 4895836 410658..411026 1 NC_009049.1 PFAM: ferredoxin; KEGG: rsp:RSP_1751 putative 2Fe-2S ferredoxin protein; ferredoxin 411026 4895836 Rsph17029_0397 Rhodobacter sphaeroides ATCC 17029 ferredoxin YP_001042285.1 410658 D 349101 CDS YP_001042286.1 126461172 4896280 411333..412538 1 NC_009049.1 PFAM: creatinase; peptidase M24; KEGG: rsp:RSP_1752 putative creatinase; peptidase M24 412538 4896280 Rsph17029_0398 Rhodobacter sphaeroides ATCC 17029 peptidase M24 YP_001042286.1 411333 D 349101 CDS YP_001042287.1 126461173 4896082 412777..414948 1 NC_009049.1 KEGG: rsp:RSP_1753 hypothetical protein; hypothetical protein 414948 4896082 Rsph17029_0399 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042287.1 412777 D 349101 CDS YP_001042288.1 126461174 4896016 415323..416132 1 NC_009049.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_1754 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 416132 4896016 Rsph17029_0400 Rhodobacter sphaeroides ATCC 17029 ErfK/YbiS/YcfS/YnhG family protein YP_001042288.1 415323 D 349101 CDS YP_001042289.1 126461175 4896217 complement(416178..416519) 1 NC_009049.1 PFAM: protein of unknown function DUF861, cupin_3; KEGG: rsp:RSP_1755 hypothetical protein; hypothetical protein 416519 4896217 Rsph17029_0401 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042289.1 416178 R 349101 CDS YP_001042290.1 126461176 4896267 416684..417517 1 NC_009049.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 417517 panB 4896267 panB Rhodobacter sphaeroides ATCC 17029 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001042290.1 416684 D 349101 CDS YP_001042291.1 126461177 4896230 417517..418356 1 NC_009049.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 418356 panC 4896230 panC Rhodobacter sphaeroides ATCC 17029 pantoate--beta-alanine ligase YP_001042291.1 417517 D 349101 CDS YP_001042292.1 126461178 4896050 complement(418463..419734) 1 NC_009049.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 419734 4896050 Rsph17029_0404 Rhodobacter sphaeroides ATCC 17029 succinyl-diaminopimelate desuccinylase YP_001042292.1 418463 R 349101 CDS YP_001042293.1 126461179 4895963 419865..420134 1 NC_009049.1 KEGG: rsp:RSP_1759 hypothetical protein; hypothetical protein 420134 4895963 Rsph17029_0405 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042293.1 419865 D 349101 CDS YP_001042294.1 126461180 4896002 420142..420798 1 NC_009049.1 PFAM: protein of unknown function DUF1523; KEGG: rsp:RSP_1760 hypothetical protein; hypothetical protein 420798 4896002 Rsph17029_0406 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042294.1 420142 D 349101 CDS YP_001042295.1 126461181 4896762 complement(420909..423326) 1 NC_009049.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 423326 pheT 4896762 pheT Rhodobacter sphaeroides ATCC 17029 phenylalanyl-tRNA synthetase subunit beta YP_001042295.1 420909 R 349101 CDS YP_001042296.1 126461182 4896173 complement(423716..424432) 1 NC_009049.1 KEGG: rsp:RSP_1762 hypothetical protein; hypothetical protein 424432 4896173 Rsph17029_0408 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042296.1 423716 R 349101 CDS YP_001042297.1 126461183 4896776 complement(424466..425548) 1 NC_009049.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 425548 pheS 4896776 pheS Rhodobacter sphaeroides ATCC 17029 phenylalanyl-tRNA synthetase subunit alpha YP_001042297.1 424466 R 349101 CDS YP_001042298.1 126461184 4896630 complement(425753..426115) 1 NC_009049.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 426115 rplT 4896630 rplT Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L20 YP_001042298.1 425753 R 349101 CDS YP_001042299.1 126461185 4896640 complement(426128..426328) 1 NC_009049.1 PFAM: ribosomal protein L35; KEGG: rsp:RSP_1765 50S ribosomal protein L35; 50S ribosomal protein L35 426328 rpmI 4896640 rpmI Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L35 YP_001042299.1 426128 R 349101 CDS YP_001042300.1 126461186 4896739 complement(426444..427889) 1 NC_009049.1 PFAM: pyruvate kinase; KEGG: rsp:RSP_1766 pyruvate kinase; pyruvate kinase 427889 4896739 Rsph17029_0412 Rhodobacter sphaeroides ATCC 17029 pyruvate kinase YP_001042300.1 426444 R 349101 CDS YP_001042301.1 126461187 4896757 428030..428767 1 NC_009049.1 PFAM: N-formylglutamate amidohydrolase; KEGG: rsp:RSP_1767 possible N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 428767 4896757 Rsph17029_0413 Rhodobacter sphaeroides ATCC 17029 N-formylglutamate amidohydrolase YP_001042301.1 428030 D 349101 CDS YP_001042302.1 126461188 4897264 complement(429102..429962) 1 NC_009049.1 PFAM: aminotransferase, class IV; KEGG: rsp:RSP_1768 aminotransferase class IV , putative D-alanine aminotransferase; aminotransferase, class IV 429962 4897264 Rsph17029_0414 Rhodobacter sphaeroides ATCC 17029 aminotransferase, class IV YP_001042302.1 429102 R 349101 CDS YP_001042303.1 126461189 4895604 complement(429965..430927) 1 NC_009049.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rsp:RSP_1769 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 430927 4895604 Rsph17029_0415 Rhodobacter sphaeroides ATCC 17029 mandelate racemase/muconate lactonizing protein YP_001042303.1 429965 R 349101 CDS YP_001042304.1 126461190 4896741 complement(431037..432038) 1 NC_009049.1 PFAM: protein of unknown function DUF1611; KEGG: rsp:RSP_1770 hypothetical protein; hypothetical protein 432038 4896741 Rsph17029_0416 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042304.1 431037 R 349101 CDS YP_001042305.1 126461191 4896207 432306..433262 1 NC_009049.1 PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_1771 beta subunit of citrate lyase; citryl-CoA lyase 433262 4896207 Rsph17029_0417 Rhodobacter sphaeroides ATCC 17029 citryl-CoA lyase YP_001042305.1 432306 D 349101 CDS YP_001042306.1 126461192 4897087 complement(433353..433817) 1 NC_009049.1 PFAM: transcription activator, effector binding; KEGG: rsp:RSP_6018 hypothetical protein; transcription activator, effector binding 433817 4897087 Rsph17029_0418 Rhodobacter sphaeroides ATCC 17029 transcription activator, effector binding YP_001042306.1 433353 R 349101 CDS YP_001042307.1 126461193 4895750 434038..434997 1 NC_009049.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 434997 4895750 Rsph17029_0419 Rhodobacter sphaeroides ATCC 17029 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001042307.1 434038 D 349101 CDS YP_001042308.1 126461194 4896764 434994..435308 1 NC_009049.1 PFAM: small multidrug resistance protein; KEGG: rsp:RSP_1773 multidrug efflux pump, SMR family, DMT superfamily; small multidrug resistance protein 435308 4896764 Rsph17029_0420 Rhodobacter sphaeroides ATCC 17029 small multidrug resistance protein YP_001042308.1 434994 D 349101 CDS YP_001042309.1 126461195 4895973 435458..436636 1 NC_009049.1 PFAM: glucose sorbosone dehydrogenase; KEGG: rsp:RSP_1774 putative glucose dehydrogenase B; glucose sorbosone dehydrogenase 436636 4895973 Rsph17029_0421 Rhodobacter sphaeroides ATCC 17029 glucose sorbosone dehydrogenase YP_001042309.1 435458 D 349101 CDS YP_001042310.1 126461196 4895727 complement(436661..437620) 1 NC_009049.1 KEGG: rsp:RSP_1775 hypothetical protein; hypothetical protein 437620 4895727 Rsph17029_0422 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042310.1 436661 R 349101 CDS YP_001042311.1 126461197 4895964 complement(437631..438101) 1 NC_009049.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 438101 greA 4895964 greA Rhodobacter sphaeroides ATCC 17029 transcription elongation factor GreA YP_001042311.1 437631 R 349101 CDS YP_001042312.1 126461198 4895623 438374..440029 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: rsp:RSP_1777 putative electron transfer flavoprotein-ubiquinone oxidoreductase precursor; electron-transferring-flavoprotein dehydrogenase 440029 4895623 Rsph17029_0424 Rhodobacter sphaeroides ATCC 17029 electron-transferring-flavoprotein dehydrogenase YP_001042312.1 438374 D 349101 CDS YP_001042313.1 126461199 4896036 440129..441829 1 NC_009049.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_1778 TPR domain protein; hypothetical protein 441829 4896036 Rsph17029_0425 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042313.1 440129 D 349101 CDS YP_001042314.1 126461200 4896274 441822..442658 1 NC_009049.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 442658 4896274 Rsph17029_0426 Rhodobacter sphaeroides ATCC 17029 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001042314.1 441822 D 349101 CDS YP_001042315.1 126461201 4896206 442804..443313 1 NC_009049.1 KEGG: rsp:RSP_1780 hypothetical protein; hypothetical protein 443313 4896206 Rsph17029_0427 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042315.1 442804 D 349101 CDS YP_001042316.1 126461202 4896662 complement(443321..444778) 1 NC_009049.1 KEGG: rsp:RSP_1781 putative membrane-anchored oxidoreductase; similar to L-sorbosone dehydrogenase; putative membrane-anchored oxidoreductase 444778 4896662 Rsph17029_0428 Rhodobacter sphaeroides ATCC 17029 putative membrane-anchored oxidoreductase YP_001042316.1 443321 R 349101 CDS YP_001042317.1 126461203 4896644 complement(444771..445226) 1 NC_009049.1 KEGG: rsp:RSP_1782 hypothetical membrane protein; hypothetical protein 445226 4896644 Rsph17029_0429 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042317.1 444771 R 349101 CDS YP_001042318.1 126461204 4897131 445374..446468 1 NC_009049.1 KEGG: rsp:RSP_1783 predicted membrane protein; membrane protein 446468 4897131 Rsph17029_0430 Rhodobacter sphaeroides ATCC 17029 membrane protein YP_001042318.1 445374 D 349101 CDS YP_001042319.1 126461205 4895755 complement(446496..446870) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_1784 response regulator receiver domain protein; response regulator receiver protein 446870 4895755 Rsph17029_0431 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042319.1 446496 R 349101 CDS YP_001042320.1 126461206 4895526 complement(447242..448246) 1 NC_009049.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1785 putative transcriptional regulatory protein; periplasmic binding protein/LacI transcriptional regulator 448246 4895526 Rsph17029_0432 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001042320.1 447242 R 349101 CDS YP_001042321.1 126461207 4896317 448414..450930 1 NC_009049.1 TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing enzyme; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: rsp:RSP_1786 multi-component fructose specific PTS system protein, (PtsI, HPr, and IIA domains); phosphoenolpyruvate-protein phosphotransferase 450930 4896317 Rsph17029_0433 Rhodobacter sphaeroides ATCC 17029 phosphoenolpyruvate-protein phosphotransferase YP_001042321.1 448414 D 349101 CDS YP_001042322.1 126461208 4896377 450927..451913 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_1787 probable 1-phosphofructokinase; 1-phosphofructokinase 451913 4896377 Rsph17029_0434 Rhodobacter sphaeroides ATCC 17029 1-phosphofructokinase YP_001042322.1 450927 D 349101 CDS YP_001042323.1 126461209 4896182 451910..453655 1 NC_009049.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: rsp:RSP_1788 PTS system, fructose-specificIIBC component; PTS system fructose subfamily transporter subunit IIC 453655 4896182 Rsph17029_0435 Rhodobacter sphaeroides ATCC 17029 PTS system fructose subfamily transporter subunit IIC YP_001042323.1 451910 D 349101 CDS YP_001042324.1 126461210 4895929 complement(453763..454089) 1 NC_009049.1 PFAM: protein of unknown function UPF0060; KEGG: rsp:RSP_1789 hypothetical protein; hypothetical protein 454089 4895929 Rsph17029_0436 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042324.1 453763 R 349101 CDS YP_001042325.1 126461211 4897927 complement(454089..454574) 1 NC_009049.1 PFAM: regulatory protein, MerR; KEGG: rsp:RSP_1790 probable transcriptional regulator; MerR family transcriptional regulator 454574 4897927 Rsph17029_0437 Rhodobacter sphaeroides ATCC 17029 MerR family transcriptional regulator YP_001042325.1 454089 R 349101 CDS YP_001042326.1 126461212 4896408 454598..456820 1 NC_009049.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_1791 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 456820 4896408 Rsph17029_0438 Rhodobacter sphaeroides ATCC 17029 heavy metal translocating P-type ATPase YP_001042326.1 454598 D 349101 CDS YP_001042327.1 126461213 4897996 complement(456944..457465) 1 NC_009049.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rsp:RSP_1793 single-strand DNA binding protein; single-strand binding protein 457465 4897996 Rsph17029_0439 Rhodobacter sphaeroides ATCC 17029 single-strand binding protein YP_001042327.1 456944 R 349101 CDS YP_001042328.1 126461214 4897224 457679..458293 1 NC_009049.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_1794 putative lytic transglycosylase; lytic transglycosylase, catalytic 458293 4897224 Rsph17029_0440 Rhodobacter sphaeroides ATCC 17029 lytic transglycosylase, catalytic YP_001042328.1 457679 D 349101 CDS YP_001042329.1 126461215 4896184 complement(458417..459709) 1 NC_009049.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 459709 4896184 Rsph17029_0441 Rhodobacter sphaeroides ATCC 17029 seryl-tRNA synthetase YP_001042329.1 458417 R 349101 CDS YP_001042330.1 126461216 4897524 complement(459816..460373) 1 NC_009049.1 PFAM: superoxide dismutase, copper/zinc binding; KEGG: rsp:RSP_1796 putative copper/zinc superoxide dismutase; superoxide dismutase, copper/zinc binding 460373 4897524 Rsph17029_0442 Rhodobacter sphaeroides ATCC 17029 superoxide dismutase, copper/zinc binding YP_001042330.1 459816 R 349101 CDS YP_001042331.1 126461217 4896744 460657..460983 1 NC_009049.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: rsp:RSP_1797 putative preprotein translocase subunit YajC; preprotein translocase subunit YajC 460983 4896744 Rsph17029_0443 Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit YajC YP_001042331.1 460657 D 349101 CDS YP_001042332.1 126461218 4896141 460999..462663 1 NC_009049.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 462663 secD 4896141 secD Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecD YP_001042332.1 460999 D 349101 CDS YP_001042333.1 126461219 4896070 462673..463647 1 NC_009049.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 463647 secF 4896070 secF Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecF YP_001042333.1 462673 D 349101 CDS YP_001042334.1 126461220 4896318 463823..464176 1 NC_009049.1 PFAM: protein of unknown function DUF498; KEGG: rsp:RSP_1800 hypothetical protein; hypothetical protein 464176 4896318 Rsph17029_0446 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042334.1 463823 D 349101 CDS YP_001042335.1 126461221 4895669 464244..464876 1 NC_009049.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 464876 4895669 Rsph17029_0447 Rhodobacter sphaeroides ATCC 17029 cytochrome c biogenesis protein CcmA YP_001042335.1 464244 D 349101 CDS YP_001042336.1 126461222 4896476 464873..465529 1 NC_009049.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rsp:RSP_1802 ABC heme exporter, inner membrane subunit CcmB; heme exporter protein CcmB 465529 4896476 Rsph17029_0448 Rhodobacter sphaeroides ATCC 17029 heme exporter protein CcmB YP_001042336.1 464873 D 349101 CDS YP_001042337.1 126461223 4896686 465572..466306 1 NC_009049.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: rsp:RSP_1803 ABC heme exporter, inner membrane subunit CcmC; heme exporter protein CcmC 466306 4896686 Rsph17029_0449 Rhodobacter sphaeroides ATCC 17029 heme exporter protein CcmC YP_001042337.1 465572 D 349101 CDS YP_001042338.1 126461224 4896900 466303..466464 1 NC_009049.1 PFAM: Heme exporter protein D (CcmD); KEGG: rsp:RSP_1804 heme exporter protein D; Heme exporter protein CcmD 466464 4896900 Rsph17029_0450 Rhodobacter sphaeroides ATCC 17029 Heme exporter protein CcmD YP_001042338.1 466303 D 349101 CDS YP_001042339.1 126461225 4896269 466457..466996 1 NC_009049.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: rsp:RSP_1805 probable thiol-disulfide interchange protein; periplasmic protein thiol--disulfide oxidoreductase DsbE 466996 4896269 Rsph17029_0451 Rhodobacter sphaeroides ATCC 17029 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001042339.1 466457 D 349101 CDS YP_001042340.1 126461226 4895961 complement(467196..469880) 1 NC_009049.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 469880 4895961 Rsph17029_0452 Rhodobacter sphaeroides ATCC 17029 aconitate hydratase YP_001042340.1 467196 R 349101 CDS YP_001042341.1 126461227 4896671 470102..470809 1 NC_009049.1 PFAM: protein of unknown function DUF1223; KEGG: rsp:RSP_1807 hypothetical protein; hypothetical protein 470809 4896671 Rsph17029_0453 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042341.1 470102 D 349101 CDS YP_001042342.1 126461228 4895745 complement(470988..472046) 1 NC_009049.1 KEGG: rsp:RSP_6019 hypothetical protein; hypothetical protein 472046 4895745 Rsph17029_0454 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042342.1 470988 R 349101 CDS YP_001042343.1 126461229 4897566 complement(472043..473116) 1 NC_009049.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 473116 4897566 Rsph17029_0455 Rhodobacter sphaeroides ATCC 17029 tryptophanyl-tRNA synthetase YP_001042343.1 472043 R 349101 CDS YP_001042344.1 126461230 4896382 473178..473864 1 NC_009049.1 PFAM: Rhomboid family protein; KEGG: sil:SPO0393 rhomboid family protein; rhomboid family protein 473864 4896382 Rsph17029_0456 Rhodobacter sphaeroides ATCC 17029 rhomboid family protein YP_001042344.1 473178 D 349101 CDS YP_001042345.1 126461231 4896273 complement(473897..475438) 1 NC_009049.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rsp:RSP_1810 putative virulence factor, MviN; integral membrane protein MviN 475438 4896273 Rsph17029_0457 Rhodobacter sphaeroides ATCC 17029 integral membrane protein MviN YP_001042345.1 473897 R 349101 CDS YP_001042346.1 126461232 4898092 complement(475435..478227) 1 NC_009049.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 478227 4898092 Rsph17029_0458 Rhodobacter sphaeroides ATCC 17029 PII uridylyl-transferase YP_001042346.1 475435 R 349101 CDS YP_001042347.1 126461233 4896528 complement(478211..479386) 1 NC_009049.1 KEGG: rsp:RSP_1812 hypothetical protein; hypothetical protein 479386 4896528 Rsph17029_0459 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042347.1 478211 R 349101 CDS YP_001042348.1 126461234 4897433 479469..480356 1 NC_009049.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_1813 hypothetical protein; Fis family transcriptional regulator 480356 4897433 Rsph17029_0460 Rhodobacter sphaeroides ATCC 17029 Fis family transcriptional regulator YP_001042348.1 479469 D 349101 CDS YP_001042349.1 126461235 4897576 480353..480706 1 NC_009049.1 PFAM: protein of unknown function UPF0102; KEGG: rsp:RSP_1814 putative endonuclease; hypothetical protein 480706 4897576 Rsph17029_0461 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042349.1 480353 D 349101 CDS YP_001042350.1 126461236 4897636 480765..481709 1 NC_009049.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 481709 4897636 Rsph17029_0462 Rhodobacter sphaeroides ATCC 17029 glutathione synthetase YP_001042350.1 480765 D 349101 CDS YP_001042351.1 126461237 4898091 complement(482073..483611) 1 NC_009049.1 KEGG: rsp:RSP_1816 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 483611 4898091 Rsph17029_0463 Rhodobacter sphaeroides ATCC 17029 Mg chelatase subunit ChlI YP_001042351.1 482073 R 349101 CDS YP_001042352.1 126461238 4896841 complement(483700..483936) 1 NC_009049.1 KEGG: rsp:RSP_1817 hypothetical protein; hypothetical protein 483936 4896841 Rsph17029_0464 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042352.1 483700 R 349101 CDS YP_001042353.1 126461239 4897613 complement(483943..486255) 1 NC_009049.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rsp:RSP_1818 Fe2+ transport system protein B; ferrous iron transport protein B 486255 4897613 Rsph17029_0465 Rhodobacter sphaeroides ATCC 17029 ferrous iron transport protein B YP_001042353.1 483943 R 349101 CDS YP_001042354.1 126461240 4897289 complement(486252..486491) 1 NC_009049.1 PFAM: FeoA family protein; KEGG: rsp:RSP_1819 ferrous iron transport protein A; FeoA family protein 486491 4897289 Rsph17029_0466 Rhodobacter sphaeroides ATCC 17029 FeoA family protein YP_001042354.1 486252 R 349101 CDS YP_001042355.1 126461241 4897914 complement(486498..486746) 1 NC_009049.1 PFAM: FeoA family protein; KEGG: rsp:RSP_6020 ferrous iron transport protein A; FeoA family protein 486746 4897914 Rsph17029_0467 Rhodobacter sphaeroides ATCC 17029 FeoA family protein YP_001042355.1 486498 R 349101 CDS YP_001042356.1 126461242 4897281 complement(487348..487845) 1 NC_009049.1 PFAM: protein of unknown function DUF892; KEGG: rsp:RSP_1820 hypothetical protein; hypothetical protein 487845 4897281 Rsph17029_0468 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042356.1 487348 R 349101 CDS YP_001042357.1 126461243 4895958 complement(488040..490340) 1 NC_009049.1 KEGG: rsp:RSP_1821 molybdopterin-containing oxidoreductase, probable formate dehydrogenase; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit 490340 4895958 Rsph17029_0469 Rhodobacter sphaeroides ATCC 17029 oxidoreductase alpha (molybdopterin) subunit YP_001042357.1 488040 R 349101 CDS YP_001042358.1 126461244 4897910 490589..492133 1 NC_009049.1 TIGRFAM: NAD+ synthetase; PFAM: NAD+ synthase; CinA domain protein; KEGG: rsp:RSP_1822 hypothetical protein; NAD+ synthetase 492133 4897910 Rsph17029_0470 Rhodobacter sphaeroides ATCC 17029 NAD+ synthetase YP_001042358.1 490589 D 349101 CDS YP_001042359.1 126461245 4896653 complement(492156..492701) 1 NC_009049.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 492701 mogA 4896653 mogA Rhodobacter sphaeroides ATCC 17029 molybdenum cofactor biosynthesis protein MogA YP_001042359.1 492156 R 349101 CDS YP_001042360.1 126461246 4895587 492993..494117 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1824 zinc-containing alcohol dehydrogenase; alcohol dehydrogenase 494117 4895587 Rsph17029_0472 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001042360.1 492993 D 349101 CDS YP_001042361.1 126461247 4897008 complement(494157..495578) 1 NC_009049.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rsp:RSP_1825 probable modulator of DNA gyrase; C69 family peptidase 495578 4897008 Rsph17029_0473 Rhodobacter sphaeroides ATCC 17029 C69 family peptidase YP_001042361.1 494157 R 349101 CDS YP_001042362.1 126461248 4898035 495748..496659 1 NC_009049.1 PFAM: cytochrome c oxidase, subunit II; cytochrome C oxidase subunit II, transmembrane region; KEGG: rsp:RSP_1826 cytochrome c oxidase polypeptide II precursor (cytochrome AA3 subunit 2); cytochrome-c oxidase 496659 4898035 Rsph17029_0474 Rhodobacter sphaeroides ATCC 17029 cytochrome-c oxidase YP_001042362.1 495748 D 349101 CDS YP_001042363.1 126461249 4895360 496730..497662 1 NC_009049.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 497662 4895360 Rsph17029_0475 Rhodobacter sphaeroides ATCC 17029 protoheme IX farnesyltransferase YP_001042363.1 496730 D 349101 CDS YP_001042364.1 126461250 4896343 497664..497840 1 NC_009049.1 KEGG: rsp:RSP_6021 hypothetical protein; hypothetical protein 497840 4896343 Rsph17029_0476 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042364.1 497664 D 349101 CDS YP_001042365.1 126461251 4896344 497837..498412 1 NC_009049.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 498412 4896344 Rsph17029_0477 Rhodobacter sphaeroides ATCC 17029 cytochrome C oxidase assembly protein YP_001042365.1 497837 D 349101 CDS YP_001042366.1 126461252 4897357 498440..499240 1 NC_009049.1 PFAM: cytochrome c oxidase, subunit III; KEGG: rsp:RSP_1829 cytochrome c oxidase, aa3-type, subunit III; cytochrome c oxidase subunit III 499240 4897357 Rsph17029_0478 Rhodobacter sphaeroides ATCC 17029 cytochrome c oxidase subunit III YP_001042366.1 498440 D 349101 CDS YP_001042367.1 126461253 4896203 499427..500098 1 NC_009049.1 KEGG: rsp:RSP_1830 SURF1 protein; SURF1 protein 500098 4896203 Rsph17029_0479 Rhodobacter sphaeroides ATCC 17029 SURF1 protein YP_001042367.1 499427 D 349101 CDS YP_001042368.1 126461254 4897990 500110..501495 1 NC_009049.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 501495 4897990 Rsph17029_0480 Rhodobacter sphaeroides ATCC 17029 threonine synthase YP_001042368.1 500110 D 349101 CDS YP_001042369.1 126461255 4896309 501492..502751 1 NC_009049.1 PFAM: peptidase M16 domain protein; KEGG: rsp:RSP_1832 peptidase, M16 family; processing peptidase 502751 4896309 Rsph17029_0481 Rhodobacter sphaeroides ATCC 17029 processing peptidase YP_001042369.1 501492 D 349101 CDS YP_001042370.1 126461256 4896559 502751..503335 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1833 putative ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 503335 4896559 Rsph17029_0482 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001042370.1 502751 D 349101 CDS YP_001042371.1 126461257 4895365 503667..504473 1 NC_009049.1 KEGG: rsp:RSP_1834 hypothetical protein; hypothetical protein 504473 4895365 Rsph17029_0483 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042371.1 503667 D 349101 CDS YP_001042372.1 126461258 4897028 504512..505927 1 NC_009049.1 PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_1835 putative FAD dependent oxidoreductase; FAD linked oxidase domain-containing protein 505927 4897028 Rsph17029_0484 Rhodobacter sphaeroides ATCC 17029 FAD linked oxidase domain-containing protein YP_001042372.1 504512 D 349101 CDS YP_001042373.1 126461259 4897075 complement(506056..506592) 1 NC_009049.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 506592 4897075 Rsph17029_0485 Rhodobacter sphaeroides ATCC 17029 adenine phosphoribosyltransferase YP_001042373.1 506056 R 349101 CDS YP_001042374.1 126461260 4895348 complement(506597..507469) 1 NC_009049.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 507469 4895348 Rsph17029_0486 Rhodobacter sphaeroides ATCC 17029 5'-methylthioadenosine phosphorylase YP_001042374.1 506597 R 349101 CDS YP_001042375.1 126461261 4895666 complement(507774..508358) 1 NC_009049.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: rsp:RSP_1838 hypothetical protein; flavin reductase domain-containing protein 508358 4895666 Rsph17029_0487 Rhodobacter sphaeroides ATCC 17029 flavin reductase domain-containing protein YP_001042375.1 507774 R 349101 CDS YP_001042376.1 126461262 4896955 508439..508924 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1839 putative acetyltransferase, GNAT family; N-acetyltransferase GCN5 508924 4896955 Rsph17029_0488 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001042376.1 508439 D 349101 CDS YP_001042377.1 126461263 4896402 509056..509907 1 NC_009049.1 KEGG: rsp:RSP_1840 hypothetical protein; hypothetical protein 509907 4896402 Rsph17029_0489 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042377.1 509056 D 349101 CDS YP_001042378.1 126461264 4896995 complement(509955..510557) 1 NC_009049.1 PFAM: Intracellular septation protein A; KEGG: rsp:RSP_1841 probable intracellular septation protein; intracellular septation protein A 510557 4896995 Rsph17029_0490 Rhodobacter sphaeroides ATCC 17029 intracellular septation protein A YP_001042378.1 509955 R 349101 CDS YP_001042379.1 126461265 4896375 complement(510569..511474) 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1842 possible transporter, DME family, DMT superfamily; hypothetical protein 511474 4896375 Rsph17029_0491 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042379.1 510569 R 349101 CDS YP_001042380.1 126461266 4896536 complement(511590..512729) 1 NC_009049.1 KEGG: rsp:RSP_1843 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 512729 4896536 Rsph17029_0492 Rhodobacter sphaeroides ATCC 17029 signal recognition particle-docking protein FtsY YP_001042380.1 511590 R 349101 CDS YP_001042381.1 126461267 4896793 512921..513319 1 NC_009049.1 KEGG: rsp:RSP_1844 hypothetical protein; hypothetical protein 513319 4896793 Rsph17029_0493 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042381.1 512921 D 349101 CDS YP_001042382.1 126461268 4897035 complement(513440..514999) 1 NC_009049.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 514999 xseA 4897035 xseA Rhodobacter sphaeroides ATCC 17029 exodeoxyribonuclease VII large subunit YP_001042382.1 513440 R 349101 CDS YP_001042383.1 126461269 4897173 complement(515230..515583) 1 NC_009049.1 KEGG: rsp:RSP_1846 hypothetical protein; hypothetical protein 515583 4897173 Rsph17029_0495 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042383.1 515230 R 349101 CDS YP_001042384.1 126461270 4896365 515743..517005 1 NC_009049.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 517005 4896365 Rsph17029_0496 Rhodobacter sphaeroides ATCC 17029 phosphoribosylamine--glycine ligase YP_001042384.1 515743 D 349101 CDS YP_001042385.1 126461271 4897451 complement(517210..518736) 1 NC_009049.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 518736 4897451 Rsph17029_0497 Rhodobacter sphaeroides ATCC 17029 pyruvate kinase YP_001042385.1 517210 R 349101 CDS YP_001042386.1 126461272 4896672 518946..520205 1 NC_009049.1 KEGG: rsp:RSP_1849 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 520205 4896672 Rsph17029_0498 Rhodobacter sphaeroides ATCC 17029 aspartate kinase YP_001042386.1 518946 D 349101 CDS YP_001042387.1 126461273 4896575 520230..522473 1 NC_009049.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: rsp:RSP_1850 phosphoenolpyruvate-protein phosphotransferase, PtsI(Ntr); phosphoenolpyruvate-protein phosphotransferase PtsP 522473 4896575 Rsph17029_0499 Rhodobacter sphaeroides ATCC 17029 phosphoenolpyruvate-protein phosphotransferase PtsP YP_001042387.1 520230 D 349101 CDS YP_001042388.1 126461274 4897245 522651..523832 1 NC_009049.1 KEGG: rsp:RSP_1851 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-succinylhomoserine sulfhydrylase 523832 4897245 Rsph17029_0500 Rhodobacter sphaeroides ATCC 17029 O-succinylhomoserine sulfhydrylase YP_001042388.1 522651 D 349101 CDS YP_001042389.1 126461275 4897468 523928..525007 1 NC_009049.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 525007 4897468 Rsph17029_0501 Rhodobacter sphaeroides ATCC 17029 putative GTP cyclohydrolase YP_001042389.1 523928 D 349101 CDS YP_001042390.1 126461276 4898078 525058..526506 1 NC_009049.1 PFAM: cation transporter; KEGG: rsp:RSP_1853 potassium uptake transporter, transmembrane component, TrkH; cation transporter 526506 4898078 Rsph17029_0502 Rhodobacter sphaeroides ATCC 17029 cation transporter YP_001042390.1 525058 D 349101 CDS YP_001042391.1 126461277 4897758 526549..528003 1 NC_009049.1 PFAM: cation transporter; KEGG: rsp:RSP_1854 potassium uptake transporter, transmembrane component, TrkH; cation transporter 528003 4897758 Rsph17029_0503 Rhodobacter sphaeroides ATCC 17029 cation transporter YP_001042391.1 526549 D 349101 CDS YP_001042392.1 126461278 4897135 complement(528073..529854) 1 NC_009049.1 PFAM: Peptidoglycan-binding domain 1 protein; Sporulation domain protein; KEGG: rsp:RSP_1855 hypothetical protein; peptidoglycan binding domain-containing protein 529854 4897135 Rsph17029_0504 Rhodobacter sphaeroides ATCC 17029 peptidoglycan binding domain-containing protein YP_001042392.1 528073 R 349101 CDS YP_001042393.1 126461279 4896987 529979..530902 1 NC_009049.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 530902 glyQ 4896987 glyQ Rhodobacter sphaeroides ATCC 17029 glycyl-tRNA synthetase subunit alpha YP_001042393.1 529979 D 349101 CDS YP_001042394.1 126461280 4896896 530899..531369 1 NC_009049.1 KEGG: rsp:RSP_1857 hypothetical protein; hypothetical protein 531369 4896896 Rsph17029_0506 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042394.1 530899 D 349101 CDS YP_001042395.1 126461281 4896570 531373..533466 1 NC_009049.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 533466 glyS 4896570 glyS Rhodobacter sphaeroides ATCC 17029 glycyl-tRNA synthetase subunit beta YP_001042395.1 531373 D 349101 CDS YP_001042396.1 126461282 4896156 533585..536131 1 NC_009049.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 536131 4896156 Rsph17029_0508 Rhodobacter sphaeroides ATCC 17029 pyruvate phosphate dikinase YP_001042396.1 533585 D 349101 CDS YP_001042397.1 126461283 4895423 536349..537071 1 NC_009049.1 PFAM: cell wall hydrolase, SleB; KEGG: rsp:RSP_1860 hypothetical protein; cell wall hydrolase SleB 537071 4895423 Rsph17029_0509 Rhodobacter sphaeroides ATCC 17029 cell wall hydrolase SleB YP_001042397.1 536349 D 349101 CDS YP_001042398.1 126461284 4895138 537171..538073 1 NC_009049.1 PFAM: dihydroneopterin aldolase; KEGG: rsp:RSP_1861 probable dihydroneopterin aldolase; dihydroneopterin aldolase 538073 4895138 Rsph17029_0510 Rhodobacter sphaeroides ATCC 17029 dihydroneopterin aldolase YP_001042398.1 537171 D 349101 CDS YP_001042399.1 126461285 4897266 538119..539156 1 NC_009049.1 KEGG: rsp:RSP_1862 dihydropteroate synthase, DhpS; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 539156 4897266 Rsph17029_0511 Rhodobacter sphaeroides ATCC 17029 dihydropteroate synthase YP_001042399.1 538119 D 349101 CDS YP_001042400.1 126461286 4895697 539153..540496 1 NC_009049.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 540496 glmM 4895697 glmM Rhodobacter sphaeroides ATCC 17029 phosphoglucosamine mutase YP_001042400.1 539153 D 349101 CDS YP_001042401.1 126461287 4895605 540595..540813 1 NC_009049.1 KEGG: rsp:RSP_1864 hypothetical protein; hypothetical protein 540813 4895605 Rsph17029_0513 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042401.1 540595 D 349101 CDS YP_001042402.1 126461288 4896282 complement(540886..541908) 1 NC_009049.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 541908 4896282 Rsph17029_0514 Rhodobacter sphaeroides ATCC 17029 ketol-acid reductoisomerase YP_001042402.1 540886 R 349101 CDS YP_001042403.1 126461289 4896195 542038..542493 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1866 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 542493 4896195 Rsph17029_0515 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001042403.1 542038 D 349101 CDS YP_001042404.1 126461290 4895615 542490..542948 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1867 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 542948 4895615 Rsph17029_0516 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001042404.1 542490 D 349101 CDS YP_001042405.1 126461291 4895591 543133..544260 1 NC_009049.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsp:RSP_1868 serine-pyruvate aminotransferase; class V aminotransferase 544260 4895591 Rsph17029_0517 Rhodobacter sphaeroides ATCC 17029 class V aminotransferase YP_001042405.1 543133 D 349101 CDS YP_001042406.1 126461292 4895271 complement(544265..545464) 1 NC_009049.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rsp:RSP_1869 2-octaprenyl-6-methoxyphenyl hydroxylase; 2-octaprenyl-6-methoxyphenyl hydroxylase 545464 4895271 Rsph17029_0518 Rhodobacter sphaeroides ATCC 17029 2-octaprenyl-6-methoxyphenyl hydroxylase YP_001042406.1 544265 R 349101 CDS YP_001042407.1 126461293 4895232 complement(545516..545746) 1 NC_009049.1 KEGG: rsp:RSP_6022 hypothetical protein; hypothetical protein 545746 4895232 Rsph17029_0519 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042407.1 545516 R 349101 CDS YP_001042408.1 126461294 4896224 complement(545827..546474) 1 NC_009049.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_1870 predicted hydrolase; pyrimidine 5'-nucleotidase 546474 4896224 Rsph17029_0520 Rhodobacter sphaeroides ATCC 17029 pyrimidine 5'-nucleotidase YP_001042408.1 545827 R 349101 CDS YP_001042409.1 126461295 4897973 546590..547225 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1871 transcriptional regulator, GntR family; GntR family transcriptional regulator 547225 4897973 Rsph17029_0521 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001042409.1 546590 D 349101 CDS YP_001042410.1 126461296 4897692 complement(547233..549143) 1 NC_009049.1 PFAM: glycosyl transferase, family 2; General secretory system II, protein E domain protein; KEGG: rsp:RSP_1872 glycosyl transferase, family 2; general secretion pathway protein E 549143 4897692 Rsph17029_0522 Rhodobacter sphaeroides ATCC 17029 general secretion pathway protein E YP_001042410.1 547233 R 349101 CDS YP_001042411.1 126461297 4897820 complement(549281..550063) 1 NC_009049.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_1873 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 550063 4897820 Rsph17029_0523 Rhodobacter sphaeroides ATCC 17029 ErfK/YbiS/YcfS/YnhG family protein YP_001042411.1 549281 R 349101 CDS YP_001042412.1 126461298 4897556 complement(550245..551408) 1 NC_009049.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 551408 4897556 Rsph17029_0524 Rhodobacter sphaeroides ATCC 17029 carbamoyl phosphate synthase small subunit YP_001042412.1 550245 R 349101 CDS YP_001042413.1 126461299 4897343 551586..552044 1 NC_009049.1 PFAM: GatB/Yqey domain protein; KEGG: rsp:RSP_1875 hypothetical protein; GatB/Yqey domain-containing protein 552044 4897343 Rsph17029_0525 Rhodobacter sphaeroides ATCC 17029 GatB/Yqey domain-containing protein YP_001042413.1 551586 D 349101 CDS YP_001042414.1 126461300 4896304 complement(552353..552883) 1 NC_009049.1 KEGG: rsp:RSP_1876 hypothetical protein; hypothetical protein 552883 4896304 Rsph17029_0526 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042414.1 552353 R 349101 CDS YP_001042415.1 126461301 4896659 complement(552897..554597) 1 NC_009049.1 PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_1877 cytochrome c oxidase, aa3 type, subunit I; cytochrome-c oxidase 554597 4896659 Rsph17029_0527 Rhodobacter sphaeroides ATCC 17029 cytochrome-c oxidase YP_001042415.1 552897 R 349101 CDS YP_001042416.1 126461302 4896766 complement(555012..555668) 1 NC_009049.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 555668 lipB 4896766 lipB Rhodobacter sphaeroides ATCC 17029 lipoate-protein ligase B YP_001042416.1 555012 R 349101 CDS YP_001042417.1 126461303 4895177 555765..557324 1 NC_009049.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1880 hypothetical protein; peptidoglycan binding domain-containing protein 557324 4895177 Rsph17029_0529 Rhodobacter sphaeroides ATCC 17029 peptidoglycan binding domain-containing protein YP_001042417.1 555765 D 349101 CDS YP_001042418.1 126461304 4895899 557822..558925 1 NC_009049.1 KEGG: rsp:RSP_1882 ABC polyamine/opine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 558925 4895899 Rsph17029_0530 Rhodobacter sphaeroides ATCC 17029 spermidine/putrescine ABC transporter ATPase YP_001042418.1 557822 D 349101 CDS YP_001042419.1 126461305 4895435 558995..560071 1 NC_009049.1 KEGG: rsp:RSP_1883 ABC polyamine/opine transporter, periplasmic substrate-binding protein; polyamine/opine ABC transporter substrate-binding protein 560071 4895435 Rsph17029_0531 Rhodobacter sphaeroides ATCC 17029 polyamine/opine ABC transporter substrate-binding protein YP_001042419.1 558995 D 349101 CDS YP_001042420.1 126461306 4898063 560123..561397 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1884 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 561397 4898063 Rsph17029_0532 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042420.1 560123 D 349101 CDS YP_001042421.1 126461307 4898020 561476..562384 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1886 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 562384 4898020 Rsph17029_0533 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042421.1 561476 D 349101 CDS YP_001042422.1 126461308 4897163 562564..562731 1 NC_009049.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 562731 rpmG 4897163 rpmG Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L33 YP_001042422.1 562564 D 349101 CDS YP_001042423.1 126461309 4896569 562806..563291 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1888 possible acetyltransferase (GNAT) family; N-acetyltransferase GCN5 563291 4896569 Rsph17029_0535 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001042423.1 562806 D 349101 CDS YP_001042424.1 126461310 4896674 complement(563342..564082) 1 NC_009049.1 PFAM: protein of unknown function UPF0005; KEGG: rsp:RSP_1889 hypothetical protein; hypothetical protein 564082 4896674 Rsph17029_0536 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042424.1 563342 R 349101 CDS YP_001042425.1 126461311 4896088 complement(564213..564443) 1 NC_009049.1 KEGG: rsp:RSP_6024 hypothetical protein; hypothetical protein 564443 4896088 Rsph17029_0537 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042425.1 564213 R 349101 CDS YP_001042426.1 126461312 4896503 564561..565496 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1890 transcriptional regulator, LysR family; LysR family transcriptional regulator 565496 4896503 Rsph17029_0538 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001042426.1 564561 D 349101 CDS YP_001042427.1 126461313 4895475 complement(565504..566463) 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1891 zinc-binding dehydrogenase; alcohol dehydrogenase 566463 4895475 Rsph17029_0539 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001042427.1 565504 R 349101 CDS YP_001042428.1 126461314 4896694 566824..567186 1 NC_009049.1 PFAM: helix-turn-helix domain protein; KEGG: rsp:RSP_1892 putative Cro/CI transcriptional regulator; XRE family transcriptional regulator 567186 4896694 Rsph17029_0540 Rhodobacter sphaeroides ATCC 17029 XRE family transcriptional regulator YP_001042428.1 566824 D 349101 CDS YP_001042429.1 126461315 4895309 567275..568075 1 NC_009049.1 PFAM: inositol monophosphatase; KEGG: rsp:RSP_1893 inositol monophosphatase family protein; inositol monophosphatase 568075 4895309 Rsph17029_0541 Rhodobacter sphaeroides ATCC 17029 inositol monophosphatase YP_001042429.1 567275 D 349101 CDS YP_001042430.1 126461316 4895454 568072..568341 1 NC_009049.1 hypothetical protein 568341 4895454 Rsph17029_0542 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042430.1 568072 D 349101 CDS YP_001042431.1 126461317 4895169 568404..568913 1 NC_009049.1 PFAM: cell wall hydrolase, SleB; KEGG: rsp:RSP_1894 hypothetical protein; cell wall hydrolase SleB 568913 4895169 Rsph17029_0543 Rhodobacter sphaeroides ATCC 17029 cell wall hydrolase SleB YP_001042431.1 568404 D 349101 CDS YP_001042432.1 126461318 4897369 569213..571576 1 NC_009049.1 PFAM: MscS Mechanosensitive ion channel; KEGG: rsp:RSP_1895 small-conductance mechanosensitive ion channel; mechanosensitive ion channel protein MscS 571576 4897369 Rsph17029_0544 Rhodobacter sphaeroides ATCC 17029 mechanosensitive ion channel protein MscS YP_001042432.1 569213 D 349101 CDS YP_001042433.1 126461319 4897193 complement(571620..572906) 1 NC_009049.1 Catalyzes the deamination of guanine; guanine deaminase 572906 4897193 Rsph17029_0545 Rhodobacter sphaeroides ATCC 17029 guanine deaminase YP_001042433.1 571620 R 349101 CDS YP_001042434.1 126461320 4897050 573038..574417 1 NC_009049.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: rsp:RSP_1897 Mg/Co/Ni transporter, MgtE; magnesium transporter 574417 4897050 Rsph17029_0546 Rhodobacter sphaeroides ATCC 17029 magnesium transporter YP_001042434.1 573038 D 349101 CDS YP_001042435.1 126461321 4896838 574414..574968 1 NC_009049.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rsp:RSP_1898 putative 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 574968 4896838 Rsph17029_0547 Rhodobacter sphaeroides ATCC 17029 5-formyltetrahydrofolate cyclo-ligase YP_001042435.1 574414 D 349101 CDS YP_001042436.1 126461322 4897963 complement(574970..576280) 1 NC_009049.1 KEGG: rsp:RSP_1899 predicted ATPase; ATPase 576280 4897963 Rsph17029_0548 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001042436.1 574970 R 349101 CDS YP_001042437.1 126461323 4895201 complement(576296..576799) 1 NC_009049.1 PFAM: peptidase A24A, prepilin type IV; KEGG: rsp:RSP_1900 putative prepilin peptidase CpaA; peptidase A24A, prepilin type IV 576799 4895201 Rsph17029_0549 Rhodobacter sphaeroides ATCC 17029 peptidase A24A, prepilin type IV YP_001042437.1 576296 R 349101 CDS YP_001042438.1 126461324 4895101 complement(576802..577710) 1 NC_009049.1 KEGG: rsp:RSP_1901 hypothetical protein with TPR repeat; hypothetical protein 577710 4895101 Rsph17029_0550 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042438.1 576802 R 349101 CDS YP_001042439.1 126461325 4895353 complement(577688..578254) 1 NC_009049.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_1902 conserved hypothetical protein with TPR repeat; hypothetical protein 578254 4895353 Rsph17029_0551 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042439.1 577688 R 349101 CDS YP_001042440.1 126461326 4897582 complement(578261..579241) 1 NC_009049.1 PFAM: type II secretion system protein; KEGG: rsp:RSP_1903 putative Flp pilus assembly protein TadC; type II secretion system protein 579241 4897582 Rsph17029_0552 Rhodobacter sphaeroides ATCC 17029 type II secretion system protein YP_001042440.1 578261 R 349101 CDS YP_001042441.1 126461327 4897444 complement(579245..580213) 1 NC_009049.1 PFAM: type II secretion system protein; KEGG: rsp:RSP_1904 putative Flp pilus assembly protein TadB; type II secretion system protein 580213 4897444 Rsph17029_0553 Rhodobacter sphaeroides ATCC 17029 type II secretion system protein YP_001042441.1 579245 R 349101 CDS YP_001042442.1 126461328 4897310 complement(580221..581678) 1 NC_009049.1 PFAM: type II secretion system protein E; KEGG: rsp:RSP_1905 putative Flp pilus assembly protein ATPase CpaF; type II secretion system protein E 581678 4897310 Rsph17029_0554 Rhodobacter sphaeroides ATCC 17029 type II secretion system protein E YP_001042442.1 580221 R 349101 CDS YP_001042443.1 126461329 4896555 complement(581699..582970) 1 NC_009049.1 KEGG: rsp:RSP_1907 putative Flp pilus assembly protein ATPase CpaE; response regulator receiver protein 582970 4896555 Rsph17029_0555 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042443.1 581699 R 349101 CDS YP_001042444.1 126461330 4896532 complement(583317..583958) 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1908 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein 583958 4896532 Rsph17029_0556 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001042444.1 583317 R 349101 CDS YP_001042445.1 126461331 4897880 complement(583964..585349) 1 NC_009049.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: rsp:RSP_1909 outer membrane general secretion pathway protein, secretin; type II and III secretion system protein 585349 4897880 Rsph17029_0557 Rhodobacter sphaeroides ATCC 17029 type II and III secretion system protein YP_001042445.1 583964 R 349101 CDS YP_001042446.1 126461332 4897803 complement(585602..586426) 1 NC_009049.1 KEGG: rsp:RSP_1910 putative Flp pilus assembly protein CpaB; putative Flp pilus assembly protein CpaB 586426 4897803 Rsph17029_0558 Rhodobacter sphaeroides ATCC 17029 putative Flp pilus assembly protein CpaB YP_001042446.1 585602 R 349101 CDS YP_001042447.1 126461333 4896138 complement(586493..586714) 1 NC_009049.1 KEGG: rsp:RSP_6219 hypothetical protein; hypothetical protein 586714 4896138 Rsph17029_0559 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042447.1 586493 R 349101 CDS YP_001042448.1 126461334 4895839 complement(586888..587220) 1 NC_009049.1 KEGG: rsp:RSP_6025 hypothetical protein; hypothetical protein 587220 4895839 Rsph17029_0560 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042448.1 586888 R 349101 CDS YP_001042449.1 126461335 4895443 587480..588370 1 NC_009049.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_1911 possible soluble lytic murein transglycosylase; lytic transglycosylase, catalytic 588370 4895443 Rsph17029_0561 Rhodobacter sphaeroides ATCC 17029 lytic transglycosylase, catalytic YP_001042449.1 587480 D 349101 CDS YP_001042450.1 126461336 4895069 complement(588429..588719) 1 NC_009049.1 KEGG: rsp:RSP_1912 hypothetical protein; hypothetical protein 588719 4895069 Rsph17029_0562 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042450.1 588429 R 349101 CDS YP_001042451.1 126461337 4895208 complement(588712..589341) 1 NC_009049.1 KEGG: rsp:RSP_1913 3-oxoadipate CoA-transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 589341 4895208 Rsph17029_0563 Rhodobacter sphaeroides ATCC 17029 3-oxoacid CoA-transferase subunit B YP_001042451.1 588712 R 349101 CDS YP_001042452.1 126461338 4895641 complement(589356..590054) 1 NC_009049.1 KEGG: rsp:RSP_1914 3-ketoacid CoA transferase alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 590054 4895641 Rsph17029_0564 Rhodobacter sphaeroides ATCC 17029 3-oxoacid CoA-transferase subunit A YP_001042452.1 589356 R 349101 CDS YP_001042453.1 126461339 4895926 590598..591521 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1915 transcriptional regulator, LysR family; LysR family transcriptional regulator 591521 4895926 Rsph17029_0565 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001042453.1 590598 D 349101 CDS YP_001042454.1 126461340 4897002 complement(591660..592181) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_6026 putative acetyltransferase; N-acetyltransferase GCN5 592181 4897002 Rsph17029_0566 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001042454.1 591660 R 349101 CDS YP_001042455.1 126461341 4896687 complement(592175..592774) 1 NC_009049.1 PFAM: DSBA oxidoreductase; KEGG: rsp:RSP_1916 possible 2-hydroxychromene-2-carboxylate isomerase; DSBA oxidoreductase 592774 4896687 Rsph17029_0567 Rhodobacter sphaeroides ATCC 17029 DSBA oxidoreductase YP_001042455.1 592175 R 349101 CDS YP_001042456.1 126461342 4896606 complement(592771..593289) 1 NC_009049.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_1917 hypothetical protein; cupin 593289 4896606 Rsph17029_0568 Rhodobacter sphaeroides ATCC 17029 cupin YP_001042456.1 592771 R 349101 CDS YP_001042457.1 126461343 4896315 593429..594406 1 NC_009049.1 KEGG: rsp:RSP_1918 predicted alpha/beta hydrolase; alpha/beta hydrolase 594406 4896315 Rsph17029_0569 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001042457.1 593429 D 349101 CDS YP_001042458.1 126461344 4896062 594434..594979 1 NC_009049.1 KEGG: rsp:RSP_1919 hypothetical protein; hypothetical protein 594979 4896062 Rsph17029_0570 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042458.1 594434 D 349101 CDS YP_001042459.1 126461345 4895469 complement(595024..595893) 1 NC_009049.1 TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rsp:RSP_1920 pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal kinase 595893 4895469 Rsph17029_0571 Rhodobacter sphaeroides ATCC 17029 pyridoxal kinase YP_001042459.1 595024 R 349101 CDS YP_001042460.1 126461346 4895320 complement(595890..596570) 1 NC_009049.1 PFAM: 3-alpha; MOSC domain containing protein; KEGG: rsp:RSP_1921 MOSC domain protein; MOSC domain-containing protein 596570 4895320 Rsph17029_0572 Rhodobacter sphaeroides ATCC 17029 MOSC domain-containing protein YP_001042460.1 595890 R 349101 CDS YP_001042461.1 126461347 4895162 596962..598374 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rsp:RSP_1922 transcriptional regulator, GntR family, with aminotransferase domain; GntR family transcriptional regulator 598374 4895162 Rsph17029_0573 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001042461.1 596962 D 349101 CDS YP_001042462.1 126461348 4897552 complement(598376..599362) 1 NC_009049.1 KEGG: rsp:RSP_1923 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 599362 4897552 Rsph17029_0574 Rhodobacter sphaeroides ATCC 17029 biotin synthase YP_001042462.1 598376 R 349101 CDS YP_001042463.1 126461349 4895414 complement(599359..599916) 1 NC_009049.1 PFAM: BioY protein; KEGG: rsp:RSP_1924 BioY family protein; BioY protein 599916 4895414 Rsph17029_0575 Rhodobacter sphaeroides ATCC 17029 BioY protein YP_001042463.1 599359 R 349101 CDS YP_001042464.1 126461350 4897255 complement(600000..600668) 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1925 transcriptional regulator, GntR family; GntR family transcriptional regulator 600668 4897255 Rsph17029_0576 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001042464.1 600000 R 349101 CDS YP_001042465.1 126461351 4897564 601144..602139 1 NC_009049.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: rsp:RSP_1926 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase A 602139 4897564 Rsph17029_0577 Rhodobacter sphaeroides ATCC 17029 tRNA-dihydrouridine synthase A YP_001042465.1 601144 D 349101 CDS YP_001042466.1 126461352 4897287 602220..603038 1 NC_009049.1 PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_1927 hypothetical protein; hypothetical protein 603038 4897287 Rsph17029_0578 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042466.1 602220 D 349101 CDS YP_001042467.1 126461353 4895620 complement(603353..604843) 1 NC_009049.1 unwinds double stranded DNA; replicative DNA helicase 604843 4895620 Rsph17029_0579 Rhodobacter sphaeroides ATCC 17029 replicative DNA helicase YP_001042467.1 603353 R 349101 CDS YP_001042468.1 126461354 4895354 complement(605112..605810) 1 NC_009049.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 605810 pyrE 4895354 pyrE Rhodobacter sphaeroides ATCC 17029 orotate phosphoribosyltransferase YP_001042468.1 605112 R 349101 CDS YP_001042469.1 126461355 4897885 complement(605853..606893) 1 NC_009049.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 606893 4897885 Rsph17029_0581 Rhodobacter sphaeroides ATCC 17029 dihydroorotase YP_001042469.1 605853 R 349101 CDS YP_001042470.1 126461356 4897762 607038..607952 1 NC_009049.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_1931 probable ATPase, AAA family; ATPase 607952 4897762 Rsph17029_0582 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001042470.1 607038 D 349101 CDS YP_001042471.1 126461357 4898095 608057..609253 1 NC_009049.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; KEGG: rsp:RSP_1932 hypothetical protein; VWA containing CoxE family protein 609253 4898095 Rsph17029_0583 Rhodobacter sphaeroides ATCC 17029 VWA containing CoxE family protein YP_001042471.1 608057 D 349101 CDS YP_001042472.1 126461358 4896457 609383..609802 1 NC_009049.1 KEGG: rsp:RSP_6241 hypothetical protein; hypothetical protein 609802 4896457 Rsph17029_0584 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042472.1 609383 D 349101 CDS YP_001042473.1 126461359 4897596 610017..612122 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1933 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein 612122 4897596 Rsph17029_0585 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001042473.1 610017 D 349101 CDS YP_001042474.1 126461360 4896722 612238..613209 1 NC_009049.1 PFAM: protein of unknown function DUF182; KEGG: sil:SPO2640 XdhC/CoxI family protein; hypothetical protein 613209 4896722 Rsph17029_0586 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042474.1 612238 D 349101 CDS YP_001042475.1 126461361 4896370 613209..614213 1 NC_009049.1 PFAM: molybdopterin binding domain; KEGG: rsp:RSP_1936 molybdopterin biosynthesis protein; Fis family transcriptional regulator 614213 4896370 Rsph17029_0587 Rhodobacter sphaeroides ATCC 17029 Fis family transcriptional regulator YP_001042475.1 613209 D 349101 CDS YP_001042476.1 126461362 4896736 complement(614285..614869) 1 NC_009049.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 614869 infC 4896736 infC Rhodobacter sphaeroides ATCC 17029 translation initiation factor IF-3 YP_001042476.1 614285 R 349101 CDS YP_001042477.1 126461363 4897119 614995..615630 1 NC_009049.1 KEGG: rsp:RSP_1938 conserved hypothetical protein; hypothetical protein 615630 4897119 Rsph17029_0589 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042477.1 614995 D 349101 CDS YP_001042478.1 126461364 4896111 complement(615745..616551) 1 NC_009049.1 PFAM: Oxidoreductase FAD-binding domain protein; KEGG: rsp:RSP_1939 NADPH-ferredoxin reductase; ferredoxin--NADP(+) reductase 616551 4896111 Rsph17029_0590 Rhodobacter sphaeroides ATCC 17029 ferredoxin--NADP(+) reductase YP_001042478.1 615745 R 349101 CDS YP_001042479.1 126461365 4895243 complement(616614..617021) 1 NC_009049.1 KEGG: rsp:RSP_1940 hypothetical protein; hypothetical protein 617021 4895243 Rsph17029_0591 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042479.1 616614 R 349101 CDS YP_001042480.1 126461366 4895700 complement(617018..617773) 1 NC_009049.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 617773 4895700 Rsph17029_0592 Rhodobacter sphaeroides ATCC 17029 phosphoadenosine phosphosulfate reductase YP_001042480.1 617018 R 349101 CDS YP_001042481.1 126461367 4897158 complement(617763..619433) 1 NC_009049.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: rsp:RSP_1942 sulfite/nitrite reductase hemoprotein subunit; nitrite/sulfite reductase hemoprotein beta subunit 619433 4897158 Rsph17029_0593 Rhodobacter sphaeroides ATCC 17029 nitrite/sulfite reductase hemoprotein beta subunit YP_001042481.1 617763 R 349101 CDS YP_001042482.1 126461368 4897456 complement(619460..619765) 1 NC_009049.1 KEGG: rsp:RSP_1943 hypothetical protein; hypothetical protein 619765 4897456 Rsph17029_0594 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042482.1 619460 R 349101 CDS YP_001042483.1 126461369 4896140 complement(619762..620526) 1 NC_009049.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_1944 uroporphiryn-III C-methyltransferase/siroheme synthase; uroporphyrin-III C-methyltransferase 620526 4896140 Rsph17029_0595 Rhodobacter sphaeroides ATCC 17029 uroporphyrin-III C-methyltransferase YP_001042483.1 619762 R 349101 CDS YP_001042484.1 126461370 4897189 620669..621130 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1945 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 621130 4897189 Rsph17029_0596 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001042484.1 620669 D 349101 CDS YP_001042485.1 126461371 4896979 complement(621301..622482) 1 NC_009049.1 PFAM: cytochrome P450; KEGG: rsp:RSP_1946 cytochrome P450 hydroxylase; cytochrome P450 622482 4896979 Rsph17029_0597 Rhodobacter sphaeroides ATCC 17029 cytochrome P450 YP_001042485.1 621301 R 349101 CDS YP_001042486.1 126461372 4897205 complement(622811..623548) 1 NC_009049.1 PFAM: triosephosphate isomerase; KEGG: rsp:RSP_1947 triosephosphate isomerase; Triose-phosphate isomerase 623548 4897205 Rsph17029_0598 Rhodobacter sphaeroides ATCC 17029 Triose-phosphate isomerase YP_001042486.1 622811 R 349101 CDS YP_001042487.1 126461373 4896883 complement(623660..624016) 1 NC_009049.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rsp:RSP_1948 protein of unknown function, HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 624016 4896883 Rsph17029_0599 Rhodobacter sphaeroides ATCC 17029 iron-sulfur cluster assembly accessory protein YP_001042487.1 623660 R 349101 CDS YP_001042488.1 126461374 4896941 complement(624100..624462) 1 NC_009049.1 PFAM: protein of unknown function DUF59; KEGG: rsp:RSP_1949 hypothetical protein; hypothetical protein 624462 4896941 Rsph17029_0600 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042488.1 624100 R 349101 CDS YP_001042489.1 126461375 4895368 624750..625553 1 NC_009049.1 KEGG: rsp:RSP_1950 hypothetical protein; hypothetical protein 625553 4895368 Rsph17029_0601 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042489.1 624750 D 349101 CDS YP_001042490.1 126461376 4895796 complement(625823..626173) 1 NC_009049.1 PFAM: protein of unknown function DUF982; KEGG: rsp:RSP_1951 hypothetical protein; hypothetical protein 626173 4895796 Rsph17029_0602 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042490.1 625823 R 349101 CDS YP_001042491.1 126461377 4896526 complement(626207..626413) 1 NC_009049.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_1952 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 626413 4896526 Rsph17029_0603 Rhodobacter sphaeroides ATCC 17029 cold-shock DNA-binding domain-containing protein YP_001042491.1 626207 R 349101 CDS YP_001042492.1 126461378 4897911 complement(627031..627771) 1 NC_009049.1 PFAM: cyclic nucleotide-binding; KEGG: rsp:RSP_1953 transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding protein 627771 4897911 Rsph17029_0604 Rhodobacter sphaeroides ATCC 17029 cyclic nucleotide-binding protein YP_001042492.1 627031 R 349101 CDS YP_001042493.1 126461379 4895815 627898..628164 1 NC_009049.1 KEGG: rsp:RSP_1954 hypothetical protein; hypothetical protein 628164 4895815 Rsph17029_0605 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042493.1 627898 D 349101 CDS YP_001042494.1 126461380 4897162 628161..629009 1 NC_009049.1 KEGG: rsp:RSP_1955 hypothetical protein; hypothetical protein 629009 4897162 Rsph17029_0606 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042494.1 628161 D 349101 CDS YP_001042495.1 126461381 4895517 629133..629858 1 NC_009049.1 KEGG: rsp:RSP_1956 hypothetical protein; hypothetical protein 629858 4895517 Rsph17029_0607 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042495.1 629133 D 349101 CDS YP_001042496.1 126461382 4897127 complement(629865..630176) 1 NC_009049.1 KEGG: rsp:RSP_1957 hypothetical protein; hypothetical protein 630176 4897127 Rsph17029_0608 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042496.1 629865 R 349101 CDS YP_001042497.1 126461383 4895663 complement(630173..630877) 1 NC_009049.1 hypothetical protein 630877 4895663 Rsph17029_0609 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042497.1 630173 R 349101 CDS YP_001042498.1 126461384 4895889 631862..632167 1 NC_009049.1 hypothetical protein 632167 4895889 Rsph17029_0612 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042498.1 631862 D 349101 CDS YP_001042499.1 126461385 4895494 632278..632751 1 NC_009049.1 KEGG: rsp:RSP_1962 hypothetical protein; hypothetical protein 632751 4895494 Rsph17029_0613 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042499.1 632278 D 349101 CDS YP_001042500.1 126461386 4896159 complement(633114..633344) 1 NC_009049.1 KEGG: rsp:RSP_1963 hypothetical protein; hypothetical protein 633344 4896159 Rsph17029_0614 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042500.1 633114 R 349101 CDS YP_001042501.1 126461387 4895289 633617..633934 1 NC_009049.1 KEGG: sil:SPOA0091 IS3 family transposase orfA; IS3 family transposase orfA 633934 4895289 Rsph17029_0615 Rhodobacter sphaeroides ATCC 17029 IS3 family transposase orfA YP_001042501.1 633617 D 349101 CDS YP_001042502.1 126461388 4895895 635014..635415 1 NC_009049.1 hypothetical protein 635415 4895895 Rsph17029_0617 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042502.1 635014 D 349101 CDS YP_001042503.1 126461389 4895100 635408..636598 1 NC_009049.1 PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_1965 putative membrane fusion protein family member; secretion protein HlyD family protein 636598 4895100 Rsph17029_0618 Rhodobacter sphaeroides ATCC 17029 secretion protein HlyD family protein YP_001042503.1 635408 D 349101 CDS YP_001042504.1 126461390 4895238 636832..638001 1 NC_009049.1 PFAM: phage integrase family protein; KEGG: nwi:Nwi_0275 phage integrase; phage integrase family protein 638001 4895238 Rsph17029_0619 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001042504.1 636832 D 349101 CDS YP_001042505.1 126461391 4895344 638147..638686 1 NC_009049.1 hypothetical protein 638686 4895344 Rsph17029_0620 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042505.1 638147 D 349101 CDS YP_001042506.1 126461392 4895420 complement(639256..640191) 1 NC_009049.1 PFAM: glycoside hydrolase, family 16; glycoside hydrolase 640191 4895420 Rsph17029_0621 Rhodobacter sphaeroides ATCC 17029 glycoside hydrolase YP_001042506.1 639256 R 349101 CDS YP_001042507.1 126461393 4895579 complement(640205..642115) 1 NC_009049.1 hypothetical protein 642115 4895579 Rsph17029_0622 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042507.1 640205 R 349101 CDS YP_001042508.1 126461394 4895783 complement(642108..642773) 1 NC_009049.1 PFAM: Collagen triple helix repeat; triple helix repeat-containing collagen 642773 4895783 Rsph17029_0623 Rhodobacter sphaeroides ATCC 17029 triple helix repeat-containing collagen YP_001042508.1 642108 R 349101 CDS YP_001042509.1 126461395 4896097 complement(642773..643204) 1 NC_009049.1 hypothetical protein 643204 4896097 Rsph17029_0624 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042509.1 642773 R 349101 CDS YP_001042510.1 126461396 4896125 complement(643763..644392) 1 NC_009049.1 KEGG: bqu:BQ11590 phage related lysozyme; Phage-related lysozyme (muraminidase)-like 644392 4896125 Rsph17029_0625 Rhodobacter sphaeroides ATCC 17029 Phage-related lysozyme (muraminidase)-like YP_001042510.1 643763 R 349101 CDS YP_001042511.1 126461397 4896281 complement(644454..644765) 1 NC_009049.1 hypothetical protein 644765 4896281 Rsph17029_0626 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042511.1 644454 R 349101 CDS YP_001042512.1 126461398 4896598 complement(644767..645222) 1 NC_009049.1 hypothetical protein 645222 4896598 Rsph17029_0627 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042512.1 644767 R 349101 CDS YP_001042513.1 126461399 4896908 complement(645219..645578) 1 NC_009049.1 hypothetical protein 645578 4896908 Rsph17029_0628 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042513.1 645219 R 349101 CDS YP_001042514.1 126461400 4896989 complement(645578..646090) 1 NC_009049.1 KEGG: rsp:RSP_3631 hypothetical protein; hypothetical protein 646090 4896989 Rsph17029_0629 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042514.1 645578 R 349101 CDS YP_001042515.1 126461401 4897482 complement(646087..649848) 1 NC_009049.1 KEGG: rsp:RSP_2990 hypothetical protein; hypothetical protein 649848 4897482 Rsph17029_0630 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042515.1 646087 R 349101 CDS YP_001042516.1 126461402 4897993 complement(649853..650266) 1 NC_009049.1 KEGG: aba:Acid345_3157 hypothetical protein; hypothetical protein 650266 4897993 Rsph17029_0631 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042516.1 649853 R 349101 CDS YP_001042517.1 126461403 4896582 complement(650263..650877) 1 NC_009049.1 hypothetical protein 650877 4896582 Rsph17029_0632 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042517.1 650263 R 349101 CDS YP_001042518.1 126461404 4897595 complement(650874..651479) 1 NC_009049.1 hypothetical protein 651479 4897595 Rsph17029_0633 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042518.1 650874 R 349101 CDS YP_001042519.1 126461405 4897149 complement(651480..653555) 1 NC_009049.1 KEGG: rsp:RSP_2059 potential phage tail tape measure protein; hypothetical protein 653555 4897149 Rsph17029_0634 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042519.1 651480 R 349101 CDS YP_001042520.1 126461406 4897232 complement(653545..653787) 1 NC_009049.1 hypothetical protein 653787 4897232 Rsph17029_0635 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042520.1 653545 R 349101 CDS YP_001042521.1 126461407 4897204 complement(653877..654185) 1 NC_009049.1 hypothetical protein 654185 4897204 Rsph17029_0636 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042521.1 653877 R 349101 CDS YP_001042522.1 126461408 4897484 complement(654215..654643) 1 NC_009049.1 hypothetical protein 654643 4897484 Rsph17029_0637 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042522.1 654215 R 349101 CDS YP_001042523.1 126461409 4895660 complement(654633..655025) 1 NC_009049.1 KEGG: rsp:RSP_6012 hypothetical protein; hypothetical protein 655025 4895660 Rsph17029_0638 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042523.1 654633 R 349101 CDS YP_001042524.1 126461410 4897252 complement(655208..655672) 1 NC_009049.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: rsp:RSP_1640 hypothetical protein; HK97 family phage protein 655672 4897252 Rsph17029_0639 Rhodobacter sphaeroides ATCC 17029 HK97 family phage protein YP_001042524.1 655208 R 349101 CDS YP_001042525.1 126461411 4897430 complement(655669..655992) 1 NC_009049.1 KEGG: rsp:RSP_2066 hypothetical protein; hypothetical protein 655992 4897430 Rsph17029_0640 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042525.1 655669 R 349101 CDS YP_001042526.1 126461412 4896496 complement(655992..656528) 1 NC_009049.1 KEGG: sit:TM1040_1667 phage conserved hypothetical protein, phiE125 gp8; hypothetical protein 656528 4896496 Rsph17029_0641 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042526.1 655992 R 349101 CDS YP_001042527.1 126461413 4897247 complement(656750..657961) 1 NC_009049.1 KEGG: sgl:SG0722 phage major head protein; phage major head protein 657961 4897247 Rsph17029_0642 Rhodobacter sphaeroides ATCC 17029 phage major head protein YP_001042527.1 656750 R 349101 CDS YP_001042528.1 126461414 4897293 complement(657986..658834) 1 NC_009049.1 PFAM: peptidase S14, ClpP; KEGG: rsp:RSP_2068 putative ClpP-like protease; peptidase S14, ClpP 658834 4897293 Rsph17029_0643 Rhodobacter sphaeroides ATCC 17029 peptidase S14, ClpP YP_001042528.1 657986 R 349101 CDS YP_001042529.1 126461415 4897021 complement(658831..660036) 1 NC_009049.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: pde:Pden_0989 phage portal protein, HK97 family; HK97 family phage portal protein 660036 4897021 Rsph17029_0644 Rhodobacter sphaeroides ATCC 17029 HK97 family phage portal protein YP_001042529.1 658831 R 349101 CDS YP_001042530.1 126461416 4895070 complement(660036..661787) 1 NC_009049.1 PFAM: phage Terminase; KEGG: son:SO2967 hypothetical phage terminase large subunit; phage terminase 661787 4895070 Rsph17029_0645 Rhodobacter sphaeroides ATCC 17029 phage terminase YP_001042530.1 660036 R 349101 CDS YP_001042531.1 126461417 4895211 complement(661792..662277) 1 NC_009049.1 TIGRFAM: phage terminase, small subunit, putative, P27 family; PFAM: phage terminase, small subunit, putative, P27; KEGG: dvu:DVU1504 terminase, small subunit; P27 family phage terminase small subunit 662277 4895211 Rsph17029_0646 Rhodobacter sphaeroides ATCC 17029 P27 family phage terminase small subunit YP_001042531.1 661792 R 349101 CDS YP_001042532.1 126461418 4897709 662365..662586 1 NC_009049.1 hypothetical protein 662586 4897709 Rsph17029_0647 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042532.1 662365 D 349101 CDS YP_001042533.1 126461419 4897019 662633..662851 1 NC_009049.1 hypothetical protein 662851 4897019 Rsph17029_0648 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042533.1 662633 D 349101 CDS YP_001042534.1 126461420 4897916 662920..663087 1 NC_009049.1 hypothetical protein 663087 4897916 Rsph17029_0649 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042534.1 662920 D 349101 CDS YP_001042535.1 126461421 4897890 663084..663275 1 NC_009049.1 XRE family transcriptional regulator 663275 4897890 Rsph17029_0650 Rhodobacter sphaeroides ATCC 17029 XRE family transcriptional regulator YP_001042535.1 663084 D 349101 CDS YP_001042536.1 126461422 4897942 663272..663949 1 NC_009049.1 hypothetical protein 663949 4897942 Rsph17029_0651 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042536.1 663272 D 349101 CDS YP_001042537.1 126461423 4896965 complement(663946..664152) 1 NC_009049.1 KEGG: pde:Pden_2067 hypothetical protein; hypothetical protein 664152 4896965 Rsph17029_0652 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042537.1 663946 R 349101 CDS YP_001042538.1 126461424 4896887 complement(664137..665516) 1 NC_009049.1 PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: hch:HCH_05682 DNA modification methylase; nuclease 665516 4896887 Rsph17029_0653 Rhodobacter sphaeroides ATCC 17029 nuclease YP_001042538.1 664137 R 349101 CDS YP_001042539.1 126461425 4897417 complement(665674..666009) 1 NC_009049.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: hch:HCH_10016 restriction endonuclease; HNH endonuclease 666009 4897417 Rsph17029_0654 Rhodobacter sphaeroides ATCC 17029 HNH endonuclease YP_001042539.1 665674 R 349101 CDS YP_001042540.1 126461426 4897199 complement(665979..666356) 1 NC_009049.1 KEGG: hch:HCH_02910 hypothetical protein; hypothetical protein 666356 4897199 Rsph17029_0655 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042540.1 665979 R 349101 CDS YP_001042541.1 126461427 4895897 complement(666484..666825) 1 NC_009049.1 hypothetical protein 666825 4895897 Rsph17029_0656 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042541.1 666484 R 349101 CDS YP_001042542.1 126461428 4896149 complement(666825..667424) 1 NC_009049.1 hypothetical protein 667424 4896149 Rsph17029_0657 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042542.1 666825 R 349101 CDS YP_001042543.1 126461429 4897606 complement(667424..667987) 1 NC_009049.1 hypothetical protein 667987 4897606 Rsph17029_0658 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042543.1 667424 R 349101 CDS YP_001042544.1 126461430 4897228 complement(667984..668715) 1 NC_009049.1 PFAM: protein of unknown function DUF1376; KEGG: mlo:mll2129 hypothetical protein; hypothetical protein 668715 4897228 Rsph17029_0659 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042544.1 667984 R 349101 CDS YP_001042545.1 126461431 4897328 complement(668712..669320) 1 NC_009049.1 PFAM: MT-A70 family protein; KEGG: sit:TM1040_1679 MT-A70; MT-A70 family protein 669320 4897328 Rsph17029_0660 Rhodobacter sphaeroides ATCC 17029 MT-A70 family protein YP_001042545.1 668712 R 349101 CDS YP_001042546.1 126461432 4897074 complement(669317..669925) 1 NC_009049.1 KEGG: rsp:RSP_3775 hypothetical protein; hypothetical protein 669925 4897074 Rsph17029_0661 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042546.1 669317 R 349101 CDS YP_001042547.1 126461433 4897030 complement(669925..670359) 1 NC_009049.1 PFAM: endodeoxyribonuclease RusA; KEGG: nar:Saro_3008 endodeoxyribonuclease RusA; endodeoxyribonuclease RusA 670359 4897030 Rsph17029_0662 Rhodobacter sphaeroides ATCC 17029 endodeoxyribonuclease RusA YP_001042547.1 669925 R 349101 CDS YP_001042548.1 126461434 4897346 complement(670363..670893) 1 NC_009049.1 hypothetical protein 670893 4897346 Rsph17029_0663 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042548.1 670363 R 349101 CDS YP_001042549.1 126461435 4896802 671778..672125 1 NC_009049.1 SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 672125 4896802 Rsph17029_0664 Rhodobacter sphaeroides ATCC 17029 helix-turn-helix domain-containing protein YP_001042549.1 671778 D 349101 CDS YP_001042550.1 126461436 4897884 672550..673890 1 NC_009049.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: sgl:SG0727 phage methyltransferase; C-5 cytosine-specific DNA methylase 673890 4897884 Rsph17029_0665 Rhodobacter sphaeroides ATCC 17029 C-5 cytosine-specific DNA methylase YP_001042550.1 672550 D 349101 CDS YP_001042551.1 126461437 4897921 674053..675276 1 NC_009049.1 KEGG: gox:GOX2479 hypothetical protein; hypothetical protein 675276 4897921 Rsph17029_0666 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042551.1 674053 D 349101 CDS YP_001042552.1 126461438 4897836 675276..676211 1 NC_009049.1 KEGG: mes:Meso_1188 hypothetical protein; hypothetical protein 676211 4897836 Rsph17029_0667 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042552.1 675276 D 349101 CDS YP_001042553.1 126461439 4896009 676626..677741 1 NC_009049.1 KEGG: nfa:nfa14870 hypothetical protein; hypothetical protein 677741 4896009 Rsph17029_0668 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042553.1 676626 D 349101 CDS YP_001042554.1 126461440 4895251 677738..677989 1 NC_009049.1 hypothetical protein 677989 4895251 Rsph17029_0669 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042554.1 677738 D 349101 CDS YP_001042555.1 126461441 4897515 677986..678504 1 NC_009049.1 PFAM: Arc domain protein DNA binding domain protein; Arc domain-containing protein 678504 4897515 Rsph17029_0670 Rhodobacter sphaeroides ATCC 17029 Arc domain-containing protein YP_001042555.1 677986 D 349101 CDS YP_001042556.1 126461442 4897140 678497..679057 1 NC_009049.1 PFAM: ribonuclease H; ribonuclease H 679057 4897140 Rsph17029_0671 Rhodobacter sphaeroides ATCC 17029 ribonuclease H YP_001042556.1 678497 D 349101 CDS YP_001042557.1 126461443 4895063 679240..679572 1 NC_009049.1 hypothetical protein 679572 4895063 Rsph17029_0672 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042557.1 679240 D 349101 CDS YP_001042558.1 126461444 4895066 679572..679886 1 NC_009049.1 hypothetical protein 679886 4895066 Rsph17029_0673 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042558.1 679572 D 349101 CDS YP_001042559.1 126461445 4896730 680004..680297 1 NC_009049.1 hypothetical protein 680297 4896730 Rsph17029_0674 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042559.1 680004 D 349101 CDS YP_001042560.1 126461446 4897195 680309..680599 1 NC_009049.1 hypothetical protein 680599 4897195 Rsph17029_0675 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042560.1 680309 D 349101 CDS YP_001042561.1 126461447 4897061 680790..681881 1 NC_009049.1 PFAM: phage integrase family protein; KEGG: rsp:RSP_1968 possible integrase/recombinase; phage integrase family protein 681881 4897061 Rsph17029_0676 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001042561.1 680790 D 349101 CDS YP_001042562.1 126461448 4897876 682128..683174 1 NC_009049.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 683174 4897876 Rsph17029_0677 Rhodobacter sphaeroides ATCC 17029 phosphoribosylaminoimidazole synthetase YP_001042562.1 682128 D 349101 CDS YP_001042563.1 126461449 4897180 683171..683761 1 NC_009049.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rsp:RSP_1970 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 683761 4897180 Rsph17029_0678 Rhodobacter sphaeroides ATCC 17029 phosphoribosylglycinamide formyltransferase YP_001042563.1 683171 D 349101 CDS YP_001042564.1 126461450 4896540 683858..685015 1 NC_009049.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: rsp:RSP_1971 ribonuclease D; ribonuclease D 685015 4896540 Rsph17029_0679 Rhodobacter sphaeroides ATCC 17029 ribonuclease D YP_001042564.1 683858 D 349101 CDS YP_001042565.1 126461451 4895084 complement(685053..685505) 1 NC_009049.1 KEGG: rsp:RSP_1972 hypothetical protein; hypothetical protein 685505 4895084 Rsph17029_0680 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042565.1 685053 R 349101 CDS YP_001042566.1 126461452 4897749 685635..686063 1 NC_009049.1 PFAM: Fe-S metabolism associated SufE; KEGG: rsp:RSP_1973 probable SufE protein; Fe-S metabolism associated SufE 686063 4897749 Rsph17029_0681 Rhodobacter sphaeroides ATCC 17029 Fe-S metabolism associated SufE YP_001042566.1 685635 D 349101 CDS YP_001042567.1 126461453 4895090 complement(686086..686433) 1 NC_009049.1 PFAM: protein of unknown function DUF427; KEGG: rsp:RSP_1974 hypothetical protein; hypothetical protein 686433 4895090 Rsph17029_0682 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042567.1 686086 R 349101 CDS YP_001042568.1 126461454 4895092 complement(686494..688290) 1 NC_009049.1 PFAM: creatinase; peptidase M24; KEGG: rsp:RSP_1975 aminopeptidase P; peptidase M24 688290 4895092 Rsph17029_0683 Rhodobacter sphaeroides ATCC 17029 peptidase M24 YP_001042568.1 686494 R 349101 CDS YP_001042569.1 126461455 4895093 complement(688290..690149) 1 NC_009049.1 KEGG: rsp:RSP_1976 aerobic cobalt chelatase, CobT subunit; PFAM: Cobalt chelatase, CobT subunit; SMART: von Willebrand factor, type A; cobaltochelatase 690149 4895093 Rsph17029_0684 Rhodobacter sphaeroides ATCC 17029 cobaltochelatase YP_001042569.1 688290 R 349101 CDS YP_001042570.1 126461456 4895096 complement(690201..690530) 1 NC_009049.1 KEGG: rsp:RSP_6027 hypothetical protein; hypothetical protein 690530 4895096 Rsph17029_0685 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042570.1 690201 R 349101 CDS YP_001042571.1 126461457 4895122 complement(690532..690861) 1 NC_009049.1 KEGG: rsp:RSP_6028 hypothetical protein; hypothetical protein 690861 4895122 Rsph17029_0686 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042571.1 690532 R 349101 CDS YP_001042572.1 126461458 4895132 complement(690858..691952) 1 NC_009049.1 KEGG: rsp:RSP_1977 cobalt chelatase, CobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities, AAA_5; cobalt chelatase small subunit 691952 4895132 Rsph17029_0687 Rhodobacter sphaeroides ATCC 17029 cobalt chelatase small subunit YP_001042572.1 690858 R 349101 CDS YP_001042573.1 126461459 4895173 complement(691998..692633) 1 NC_009049.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rsp:RSP_1978 molecular chaperone, DnaJ family; heat shock protein DnaJ domain-containing protein 692633 4895173 Rsph17029_0688 Rhodobacter sphaeroides ATCC 17029 heat shock protein DnaJ domain-containing protein YP_001042573.1 691998 R 349101 CDS YP_001042574.1 126461460 4895152 692708..692965 1 NC_009049.1 PFAM: BolA family protein; KEGG: rsp:RSP_1979 stress induced morphogen, BolA; BolA family protein 692965 4895152 Rsph17029_0689 Rhodobacter sphaeroides ATCC 17029 BolA family protein YP_001042574.1 692708 D 349101 CDS YP_001042575.1 126461461 4895216 complement(693074..695233) 1 NC_009049.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 695233 4895216 Rsph17029_0690 Rhodobacter sphaeroides ATCC 17029 malate synthase G YP_001042575.1 693074 R 349101 CDS YP_001042576.1 126461462 4895210 complement(695333..696697) 1 NC_009049.1 PFAM: DNA photolyase domain protein; KEGG: rsp:RSP_1981 deoxyribodipyrimidine photolyase; DNA photolyase domain-containing protein 696697 4895210 Rsph17029_0691 Rhodobacter sphaeroides ATCC 17029 DNA photolyase domain-containing protein YP_001042576.1 695333 R 349101 CDS YP_001042577.1 126461463 4895247 697052..699700 1 NC_009049.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: rsp:RSP_1982 aminopeptidase N; aminopeptidase N 699700 pepN 4895247 pepN Rhodobacter sphaeroides ATCC 17029 aminopeptidase N YP_001042577.1 697052 D 349101 CDS YP_001042578.1 126461464 4895261 699807..700718 1 NC_009049.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rsp:RSP_1983 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 700718 4895261 Rsph17029_0693 Rhodobacter sphaeroides ATCC 17029 phospholipid/glycerol acyltransferase YP_001042578.1 699807 D 349101 CDS YP_001042579.1 126461465 4895256 700948..702051 1 NC_009049.1 catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate; histidinol-phosphate aminotransferase 702051 4895256 Rsph17029_0694 Rhodobacter sphaeroides ATCC 17029 histidinol-phosphate aminotransferase YP_001042579.1 700948 D 349101 CDS YP_001042580.1 126461466 4895252 complement(702066..702566) 1 NC_009049.1 KEGG: rsp:RSP_1985 hypothetical protein; hypothetical protein 702566 4895252 Rsph17029_0695 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042580.1 702066 R 349101 CDS YP_001042581.1 126461467 4895312 complement(702665..704176) 1 NC_009049.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 704176 gatB 4895312 gatB Rhodobacter sphaeroides ATCC 17029 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001042581.1 702665 R 349101 CDS YP_001042582.1 126461468 4895304 704345..704941 1 NC_009049.1 KEGG: rsp:RSP_1987 hypothetical protein; hypothetical protein 704941 4895304 Rsph17029_0697 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042582.1 704345 D 349101 CDS YP_001042583.1 126461469 4895265 complement(704945..705289) 1 NC_009049.1 KEGG: rsp:RSP_1988 hypothetical protein; hypothetical protein 705289 4895265 Rsph17029_0698 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042583.1 704945 R 349101 CDS YP_001042584.1 126461470 4895341 complement(705356..708319) 1 NC_009049.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 708319 valS 4895341 valS Rhodobacter sphaeroides ATCC 17029 valyl-tRNA synthetase YP_001042584.1 705356 R 349101 CDS YP_001042585.1 126461471 4895337 complement(708438..708869) 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1990 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 708869 4895337 Rsph17029_0700 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001042585.1 708438 R 349101 CDS YP_001042586.1 126461472 4895418 709089..710234 1 NC_009049.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rsp:RSP_1991 putative ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 710234 4895418 Rsph17029_0701 Rhodobacter sphaeroides ATCC 17029 Orn/DAP/Arg decarboxylase 2 YP_001042586.1 709089 D 349101 CDS YP_001042587.1 126461473 4895404 710391..711494 1 NC_009049.1 KEGG: rsp:RSP_1992 hypothetical protein; hypothetical protein 711494 4895404 Rsph17029_0702 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042587.1 710391 D 349101 CDS YP_001042588.1 126461474 4895372 complement(711512..711988) 1 NC_009049.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_1993 hypothetical protein; hypothetical protein 711988 4895372 Rsph17029_0703 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042588.1 711512 R 349101 CDS YP_001042589.1 126461475 4895366 complement(712321..713607) 1 NC_009049.1 KEGG: rsp:RSP_1994 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 713607 4895366 Rsph17029_0704 Rhodobacter sphaeroides ATCC 17029 citrate synthase I YP_001042589.1 712321 R 349101 CDS YP_001042590.1 126461476 4895440 complement(713714..715129) 1 NC_009049.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 715129 gltX 4895440 gltX Rhodobacter sphaeroides ATCC 17029 glutamyl-tRNA synthetase YP_001042590.1 713714 R 349101 CDS YP_001042591.1 126461477 4895495 715263..717317 1 NC_009049.1 PFAM: ComEC/Rec2-related protein; KEGG: rsp:RSP_1996 putative competence protein; ComEC/Rec2-like protein 717317 4895495 Rsph17029_0706 Rhodobacter sphaeroides ATCC 17029 ComEC/Rec2-like protein YP_001042591.1 715263 D 349101 CDS YP_001042592.1 126461478 4895588 complement(717373..718056) 1 NC_009049.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 718056 4895588 Rsph17029_0707 Rhodobacter sphaeroides ATCC 17029 LexA repressor YP_001042592.1 717373 R 349101 CDS YP_001042593.1 126461479 4895566 complement(718116..719300) 1 NC_009049.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: rsp:RSP_1998 molybdenum cofactor biosynthesis protein A; molybdenum cofactor synthesis domain-containing protein 719300 4895566 Rsph17029_0708 Rhodobacter sphaeroides ATCC 17029 molybdenum cofactor synthesis domain-containing protein YP_001042593.1 718116 R 349101 CDS YP_001042594.1 126461480 4895521 complement(719297..719776) 1 NC_009049.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 719776 moaC 4895521 moaC Rhodobacter sphaeroides ATCC 17029 molybdenum cofactor biosynthesis protein MoaC YP_001042594.1 719297 R 349101 CDS YP_001042595.1 126461481 4895590 complement(719776..720588) 1 NC_009049.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase 720588 trpC 4895590 trpC Rhodobacter sphaeroides ATCC 17029 Indole-3-glycerol phosphate synthase YP_001042595.1 719776 R 349101 CDS YP_001042596.1 126461482 4895618 complement(720619..721635) 1 NC_009049.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 721635 trpD 4895618 trpD Rhodobacter sphaeroides ATCC 17029 anthranilate phosphoribosyltransferase YP_001042596.1 720619 R 349101 CDS YP_001042597.1 126461483 4895589 complement(721632..722219) 1 NC_009049.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 722219 4895589 Rsph17029_0712 Rhodobacter sphaeroides ATCC 17029 anthranilate synthase component II YP_001042597.1 721632 R 349101 CDS YP_001042598.1 126461484 4895642 722398..723831 1 NC_009049.1 PFAM: protein of unknown function DUF610, YibQ; KEGG: rsp:RSP_2003 YibQ protein; hypothetical protein 723831 4895642 Rsph17029_0713 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042598.1 722398 D 349101 CDS YP_001042599.1 126461485 4895644 complement(723995..725506) 1 NC_009049.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 725506 4895644 Rsph17029_0714 Rhodobacter sphaeroides ATCC 17029 anthranilate synthase component I YP_001042599.1 723995 R 349101 CDS YP_001042600.1 126461486 4895638 complement(725516..727381) 1 NC_009049.1 KEGG: rsp:RSP_2005 possible peptidyl-prolyl cis-trans isomerse; putative peptidyl-prolyl cis-trans isomerse 727381 4895638 Rsph17029_0715 Rhodobacter sphaeroides ATCC 17029 putative peptidyl-prolyl cis-trans isomerse YP_001042600.1 725516 R 349101 CDS YP_001042601.1 126461487 4895622 727579..729561 1 NC_009049.1 PFAM: AsmA family protein; KEGG: rsp:RSP_2006 hypothetical protein; AsmA family protein 729561 4895622 Rsph17029_0716 Rhodobacter sphaeroides ATCC 17029 AsmA family protein YP_001042601.1 727579 D 349101 CDS YP_001042602.1 126461488 4895716 complement(729743..730366) 1 NC_009049.1 PFAM: GcrA cell cycle regulator; KEGG: rsp:RSP_2007 conservd hypothetical protein; GcrA cell cycle regulator 730366 4895716 Rsph17029_0717 Rhodobacter sphaeroides ATCC 17029 GcrA cell cycle regulator YP_001042602.1 729743 R 349101 CDS YP_001042603.1 126461489 4895701 730952..732133 1 NC_009049.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 732133 argD 4895701 argD Rhodobacter sphaeroides ATCC 17029 acetylornithine transaminase protein YP_001042603.1 730952 D 349101 CDS YP_001042604.1 126461490 4895693 732247..733173 1 NC_009049.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 733173 4895693 Rsph17029_0719 Rhodobacter sphaeroides ATCC 17029 ornithine carbamoyltransferase YP_001042604.1 732247 D 349101 CDS YP_001042605.1 126461491 4895686 complement(733397..733603) 1 NC_009049.1 KEGG: rsp:RSP_2010 hypothetical protein; hypothetical protein 733603 4895686 Rsph17029_0720 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042605.1 733397 R 349101 CDS YP_001042606.1 126461492 4895744 complement(733781..734275) 1 NC_009049.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rsp:RSP_2011 putative transcription elongation factor; GreA/GreB family elongation factor 734275 4895744 Rsph17029_0721 Rhodobacter sphaeroides ATCC 17029 GreA/GreB family elongation factor YP_001042606.1 733781 R 349101 CDS YP_001042607.1 126461493 4895742 complement(734301..734741) 1 NC_009049.1 PFAM: NUDIX hydrolase; KEGG: rsp:RSP_2012 NUDIX hydrolase, MutT; NUDIX hydrolase 734741 4895742 Rsph17029_0722 Rhodobacter sphaeroides ATCC 17029 NUDIX hydrolase YP_001042607.1 734301 R 349101 CDS YP_001042608.1 126461494 4895753 complement(735245..737671) 1 NC_009049.1 KEGG: rsp:RSP_2013 DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD-like helicases-like; ATP-dependent helicase HrpB 737671 4895753 Rsph17029_0723 Rhodobacter sphaeroides ATCC 17029 ATP-dependent helicase HrpB YP_001042608.1 735245 R 349101 CDS YP_001042609.1 126461495 4895739 complement(737717..738430) 1 NC_009049.1 KEGG: rsp:RSP_2014 hypothetical protein; hypothetical protein 738430 4895739 Rsph17029_0724 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042609.1 737717 R 349101 CDS YP_001042610.1 126461496 4895720 738567..739538 1 NC_009049.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 739538 4895720 Rsph17029_0725 Rhodobacter sphaeroides ATCC 17029 arginine/ornithine transport system ATPase YP_001042610.1 738567 D 349101 CDS YP_001042611.1 126461497 4895773 739752..740042 1 NC_009049.1 required for 70S ribosome assembly; 50S ribosomal protein L28 740042 rpmB 4895773 rpmB Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L28 YP_001042611.1 739752 D 349101 CDS YP_001042612.1 126461498 4895763 740170..740577 1 NC_009049.1 KEGG: rsp:RSP_6029 hypothetical protein; hypothetical protein 740577 4895763 Rsph17029_0727 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042612.1 740170 D 349101 CDS YP_001042613.1 126461499 4895777 740607..741089 1 NC_009049.1 PFAM: protein of unknown function DUF461; KEGG: rsp:RSP_2017 hypothetical protein; hypothetical protein 741089 4895777 Rsph17029_0728 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042613.1 740607 D 349101 CDS YP_001042614.1 126461500 4895761 complement(741129..741440) 1 NC_009049.1 KEGG: rsp:RSP_2018 hypothetical protein; hypothetical protein 741440 4895761 Rsph17029_0729 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042614.1 741129 R 349101 CDS YP_001042615.1 126461501 4895757 complement(741648..742100) 1 NC_009049.1 KEGG: rsp:RSP_2019 hypothetical protein; hypothetical protein 742100 4895757 Rsph17029_0730 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042615.1 741648 R 349101 CDS YP_001042616.1 126461502 4895832 complement(742416..742928) 1 NC_009049.1 KEGG: rsp:RSP_2020 DHC, diheme cytochrome c; diheme cytochrome C 742928 4895832 Rsph17029_0731 Rhodobacter sphaeroides ATCC 17029 diheme cytochrome C YP_001042616.1 742416 R 349101 CDS YP_001042617.1 126461503 4895808 complement(742925..743329) 1 NC_009049.1 PFAM: cytochrome c, monohaem; KEGG: rsp:RSP_2021 mono-heme class I cytochrome c; cytochrome c, monoheme 743329 4895808 Rsph17029_0732 Rhodobacter sphaeroides ATCC 17029 cytochrome c, monoheme YP_001042617.1 742925 R 349101 CDS YP_001042618.1 126461504 4895800 complement(743333..744424) 1 NC_009049.1 PFAM: cytochrome B561; KEGG: rsp:RSP_2022 cytochrome b/diheme cytochrome c hybrid protein; cytochrome B561 744424 4895800 Rsph17029_0733 Rhodobacter sphaeroides ATCC 17029 cytochrome B561 YP_001042618.1 743333 R 349101 CDS YP_001042619.1 126461505 4895810 complement(744719..745198) 1 NC_009049.1 KEGG: rsp:RSP_2023 hypothetical protein; hypothetical protein 745198 4895810 Rsph17029_0734 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042619.1 744719 R 349101 CDS YP_001042620.1 126461506 4895793 745521..745727 1 NC_009049.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_2024 cold shock protein CspA; cold-shock DNA-binding domain-containing protein 745727 4895793 Rsph17029_0735 Rhodobacter sphaeroides ATCC 17029 cold-shock DNA-binding domain-containing protein YP_001042620.1 745521 D 349101 CDS YP_001042621.1 126461507 4895782 complement(745777..746139) 1 NC_009049.1 KEGG: rsp:RSP_2025 hypothetical protein; hypothetical protein 746139 4895782 Rsph17029_0736 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042621.1 745777 R 349101 CDS YP_001042622.1 126461508 4895850 746181..747158 1 NC_009049.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rsp:RSP_2026 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 747158 4895850 Rsph17029_0737 Rhodobacter sphaeroides ATCC 17029 helix-turn-helix domain-containing protein YP_001042622.1 746181 D 349101 CDS YP_001042623.1 126461509 4895837 complement(747461..748351) 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2027 transcriptional regulator, LysR family; LysR family transcriptional regulator 748351 4895837 Rsph17029_0738 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001042623.1 747461 R 349101 CDS YP_001042624.1 126461510 4895869 748449..748772 1 NC_009049.1 KEGG: rsp:RSP_2028 hypothetical protein; hypothetical protein 748772 4895869 Rsph17029_0739 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042624.1 748449 D 349101 CDS YP_001042625.1 126461511 4895871 748769..749548 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_2029 short chain dehydrogenase; short chain dehydrogenase 749548 4895871 Rsph17029_0740 Rhodobacter sphaeroides ATCC 17029 short chain dehydrogenase YP_001042625.1 748769 D 349101 CDS YP_001042626.1 126461512 4895864 complement(749629..750699) 1 NC_009049.1 PFAM: HWE histidine kinase; KEGG: rsp:RSP_2030 putative sensor histidine kinase; signal transduction histidine kinase 750699 4895864 Rsph17029_0741 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase YP_001042626.1 749629 R 349101 CDS YP_001042627.1 126461513 4895859 751258..751662 1 NC_009049.1 KEGG: rsp:RSP_2032 putative hypothetical Gifsy-1 prophage protein; Gifsy-1 prophage protein 751662 4895859 Rsph17029_0742 Rhodobacter sphaeroides ATCC 17029 Gifsy-1 prophage protein YP_001042627.1 751258 D 349101 CDS YP_001042628.1 126461514 4895891 751683..751961 1 NC_009049.1 KEGG: rsp:RSP_2033 hypothetical protein; hypothetical protein 751961 4895891 Rsph17029_0743 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042628.1 751683 D 349101 CDS YP_001042629.1 126461515 4895890 752034..752768 1 NC_009049.1 PFAM: Abortive infection protein; KEGG: rsp:RSP_2034 possible CAAX amino terminal protease family; abortive infection protein 752768 4895890 Rsph17029_0744 Rhodobacter sphaeroides ATCC 17029 abortive infection protein YP_001042629.1 752034 D 349101 CDS YP_001042630.1 126461516 4895898 752784..752954 1 NC_009049.1 KEGG: rsp:RSP_6030 hypothetical protein; hypothetical protein 752954 4895898 Rsph17029_0745 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042630.1 752784 D 349101 CDS YP_001042631.1 126461517 4895873 complement(753066..753770) 1 NC_009049.1 KEGG: rsp:RSP_2035 hypothetical protein; hypothetical protein 753770 4895873 Rsph17029_0746 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042631.1 753066 R 349101 CDS YP_001042632.1 126461518 4895925 753886..754083 1 NC_009049.1 KEGG: rsp:RSP_2036 putative ECF/RNA polymerase sigma factor protein; putative ECF/RNA polymerase sigma factor protein 754083 4895925 Rsph17029_0747 Rhodobacter sphaeroides ATCC 17029 putative ECF/RNA polymerase sigma factor protein YP_001042632.1 753886 D 349101 CDS YP_001042633.1 126461519 4895938 754178..754831 1 NC_009049.1 KEGG: rsp:RSP_2037 hypothetical protein; hypothetical protein 754831 4895938 Rsph17029_0748 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042633.1 754178 D 349101 CDS YP_001042634.1 126461520 4895921 754833..755162 1 NC_009049.1 hypothetical protein 755162 4895921 Rsph17029_0749 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042634.1 754833 D 349101 CDS YP_001042635.1 126461521 4895902 755300..755752 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2038 possible acetyltransferase; N-acetyltransferase GCN5 755752 4895902 Rsph17029_0750 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001042635.1 755300 D 349101 CDS YP_001042636.1 126461522 4895989 755990..756742 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2039 short chain dehydrogenase; short chain dehydrogenase 756742 4895989 Rsph17029_0751 Rhodobacter sphaeroides ATCC 17029 short chain dehydrogenase YP_001042636.1 755990 D 349101 CDS YP_001042637.1 126461523 4897859 complement(757754..758071) 1 NC_009049.1 KEGG: sil:SPOA0091 IS3 family transposase orfA; hypothetical protein 758071 4897859 Rsph17029_0753 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042637.1 757754 R 349101 CDS YP_001042638.1 126461524 4895272 758578..758883 1 NC_009049.1 KEGG: rsp:RSP_2080 putative tyrosine recombinase; putative tyrosine recombinase 758883 4895272 Rsph17029_0755 Rhodobacter sphaeroides ATCC 17029 putative tyrosine recombinase YP_001042638.1 758578 D 349101 CDS YP_001042639.1 126461525 4897949 complement(759037..759507) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2081 putative acetyltransferase, GNAT family; N-acetyltransferase GCN5 759507 4897949 Rsph17029_0756 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001042639.1 759037 R 349101 CDS YP_001042640.1 126461526 4895999 complement(759823..760134) 1 NC_009049.1 PFAM: ETC complex I subunit conserved region; KEGG: rsp:RSP_2082 putative NADH-ubiquinone oxidoreductase-related protein; ETC complex I subunit region 760134 4895999 Rsph17029_0757 Rhodobacter sphaeroides ATCC 17029 ETC complex I subunit region YP_001042640.1 759823 R 349101 CDS YP_001042641.1 126461527 4896005 760390..762573 1 NC_009049.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 762573 4896005 Rsph17029_0758 Rhodobacter sphaeroides ATCC 17029 excinuclease ABC subunit B YP_001042641.1 760390 D 349101 CDS YP_001042642.1 126461528 4896041 762913..763626 1 NC_009049.1 KEGG: rsp:RSP_2084 hypothetical protein; hypothetical protein 763626 4896041 Rsph17029_0759 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042642.1 762913 D 349101 CDS YP_001042643.1 126461529 4896042 complement(763632..763904) 1 NC_009049.1 hypothetical protein 763904 4896042 Rsph17029_0760 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042643.1 763632 R 349101 CDS YP_001042644.1 126461530 4896038 complement(764005..764322) 1 NC_009049.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rsp:RSP_2086 putative antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 764322 4896038 Rsph17029_0761 Rhodobacter sphaeroides ATCC 17029 antibiotic biosynthesis monooxygenase YP_001042644.1 764005 R 349101 CDS YP_001042645.1 126461531 4896013 764514..764705 1 NC_009049.1 KEGG: rsp:RSP_2087 hypothetical protein; hypothetical protein 764705 4896013 Rsph17029_0762 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042645.1 764514 D 349101 CDS YP_001042646.1 126461532 4896064 764959..765102 1 NC_009049.1 PFAM: Entericidin EcnAB; KEGG: rsp:RSP_6220 hypothetical protein; entericidin EcnAB 765102 4896064 Rsph17029_0763 Rhodobacter sphaeroides ATCC 17029 entericidin EcnAB YP_001042646.1 764959 D 349101 CDS YP_001042647.1 126461533 4896083 complement(765140..766948) 1 NC_009049.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 766948 4896083 Rsph17029_0764 Rhodobacter sphaeroides ATCC 17029 GTP-binding protein LepA YP_001042647.1 765140 R 349101 CDS YP_001042648.1 126461534 4897986 complement(767876..771340) 1 NC_009049.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 771340 4897986 Rsph17029_0765 Rhodobacter sphaeroides ATCC 17029 pyruvate carboxylase YP_001042648.1 767876 R 349101 CDS YP_001042649.1 126461535 4896102 771514..773874 1 NC_009049.1 PFAM: UvrD/REP helicase; KEGG: rsp:RSP_2092 putative UvrD/DNA helicase II; UvrD/REP helicase 773874 4896102 Rsph17029_0766 Rhodobacter sphaeroides ATCC 17029 UvrD/REP helicase YP_001042649.1 771514 D 349101 CDS YP_001042650.1 126461536 4896103 complement(773895..775040) 1 NC_009049.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rsp:RSP_2091 putative benzoate transporter, BenE; benzoate transporter 775040 4896103 Rsph17029_0767 Rhodobacter sphaeroides ATCC 17029 benzoate transporter YP_001042650.1 773895 R 349101 CDS YP_001042651.1 126461537 4896096 complement(776187..776402) 1 NC_009049.1 PFAM: protein of unknown function DUF1127; KEGG: rsp:RSP_6037 hypothetical protein; hypothetical protein 776402 4896096 Rsph17029_0768 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042651.1 776187 R 349101 CDS YP_001042652.1 126461538 4896124 776672..777733 1 NC_009049.1 KEGG: rsp:RSP_2093 putative Mrp (multidrug resistance-associated proteins) family protein; putative Mrp (multidrug resistance-associated proteins) family protein 777733 4896124 Rsph17029_0769 Rhodobacter sphaeroides ATCC 17029 putative Mrp (multidrug resistance-associated proteins) family protein YP_001042652.1 776672 D 349101 CDS YP_001042653.1 126461539 4896120 777763..778230 1 NC_009049.1 hypothetical protein 778230 4896120 Rsph17029_0770 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042653.1 777763 D 349101 CDS YP_001042654.1 126461540 4896119 778636..779142 1 NC_009049.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 779142 4896119 Rsph17029_0771 Rhodobacter sphaeroides ATCC 17029 cell division protein MraZ YP_001042654.1 778636 D 349101 CDS YP_001042655.1 126461541 4896143 779146..780141 1 NC_009049.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rsp:RSP_6038 methyltransferase MraW/YabC; S-adenosyl-methyltransferase MraW 780141 mraW 4896143 mraW Rhodobacter sphaeroides ATCC 17029 S-adenosyl-methyltransferase MraW YP_001042655.1 779146 D 349101 CDS YP_001042656.1 126461542 4896130 780142..780501 1 NC_009049.1 KEGG: rsp:RSP_2097 putative FtsL; putative FtsL protein 780501 4896130 Rsph17029_0773 Rhodobacter sphaeroides ATCC 17029 putative FtsL protein YP_001042656.1 780142 D 349101 CDS YP_001042657.1 126461543 4896128 780498..782291 1 NC_009049.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: rsp:RSP_2098 cell division protein FtsI/penicillin-binding protein 2; peptidoglycan glycosyltransferase 782291 4896128 Rsph17029_0774 Rhodobacter sphaeroides ATCC 17029 peptidoglycan glycosyltransferase YP_001042657.1 780498 D 349101 CDS YP_001042658.1 126461544 4896164 782306..783793 1 NC_009049.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 783793 murE 4896164 murE Rhodobacter sphaeroides ATCC 17029 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001042658.1 782306 D 349101 CDS YP_001042659.1 126461545 4896160 783882..785315 1 NC_009049.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rsp:RSP_2100 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 785315 4896160 Rsph17029_0776 Rhodobacter sphaeroides ATCC 17029 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001042659.1 783882 D 349101 CDS YP_001042660.1 126461546 4896162 785328..786410 1 NC_009049.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 786410 mraY 4896162 mraY Rhodobacter sphaeroides ATCC 17029 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001042660.1 785328 D 349101 CDS YP_001042661.1 126461547 4896154 786507..787088 1 NC_009049.1 PFAM: transport-associated; KEGG: rsp:RSP_2102 hypothetical protein; transport-associated 787088 4896154 Rsph17029_0778 Rhodobacter sphaeroides ATCC 17029 transport-associated YP_001042661.1 786507 D 349101 CDS YP_001042662.1 126461548 4896205 787519..788916 1 NC_009049.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 788916 murD 4896205 murD Rhodobacter sphaeroides ATCC 17029 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001042662.1 787519 D 349101 CDS YP_001042663.1 126461549 4896181 788972..789442 1 NC_009049.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_2104 hypothetical protein; glutathione-dependent formaldehyde-activating protein 789442 4896181 Rsph17029_0780 Rhodobacter sphaeroides ATCC 17029 glutathione-dependent formaldehyde-activating protein YP_001042663.1 788972 D 349101 CDS YP_001042664.1 126461550 4896216 complement(789795..790265) 1 NC_009049.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rsp:RSP_2105 hypothetical protein; activator of Hsp90 ATPase 1 family protein 790265 4896216 Rsph17029_0781 Rhodobacter sphaeroides ATCC 17029 activator of Hsp90 ATPase 1 family protein YP_001042664.1 789795 R 349101 CDS YP_001042665.1 126461551 4896251 790442..791608 1 NC_009049.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rsp:RSP_2106 cell division protein FtsW; cell division protein FtsW 791608 4896251 Rsph17029_0782 Rhodobacter sphaeroides ATCC 17029 cell division protein FtsW YP_001042665.1 790442 D 349101 CDS YP_001042666.1 126461552 4896233 791610..792704 1 NC_009049.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 792704 murG 4896233 murG Rhodobacter sphaeroides ATCC 17029 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001042666.1 791610 D 349101 CDS YP_001042667.1 126461553 4896223 792701..794113 1 NC_009049.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 794113 murC 4896223 murC Rhodobacter sphaeroides ATCC 17029 UDP-N-acetylmuramate--L-alanine ligase YP_001042667.1 792701 D 349101 CDS YP_001042668.1 126461554 4896263 794128..794382 1 NC_009049.1 KEGG: rsp:RSP_2109 hypothetical protein; hypothetical protein 794382 4896263 Rsph17029_0785 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042668.1 794128 D 349101 CDS YP_001042669.1 126461555 4896260 794379..795305 1 NC_009049.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 795305 murB 4896260 murB Rhodobacter sphaeroides ATCC 17029 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001042669.1 794379 D 349101 CDS YP_001042670.1 126461556 4896264 795345..796268 1 NC_009049.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 796268 ddl 4896264 ddl Rhodobacter sphaeroides ATCC 17029 D-alanine--D-alanine ligase YP_001042670.1 795345 D 349101 CDS YP_001042671.1 126461557 4896259 796256..797182 1 NC_009049.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: rsp:RSP_2112 cell division septal protein FtsQ; cell division protein FtsQ 797182 4896259 Rsph17029_0788 Rhodobacter sphaeroides ATCC 17029 cell division protein FtsQ YP_001042671.1 796256 D 349101 CDS YP_001042672.1 126461558 4896332 797179..798513 1 NC_009049.1 PFAM: cell division protein FtsA; KEGG: rsp:RSP_2113 cell division protein FtsA; cell division protein FtsA 798513 4896332 Rsph17029_0789 Rhodobacter sphaeroides ATCC 17029 cell division protein FtsA YP_001042672.1 797179 D 349101 CDS YP_001042673.1 126461559 4896339 798693..800351 1 NC_009049.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 800351 4896339 Rsph17029_0790 Rhodobacter sphaeroides ATCC 17029 cell division protein FtsZ YP_001042673.1 798693 D 349101 CDS YP_001042674.1 126461560 4896355 800579..801499 1 NC_009049.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 801499 lpxC 4896355 lpxC Rhodobacter sphaeroides ATCC 17029 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001042674.1 800579 D 349101 CDS YP_001042675.1 126461561 4896352 801614..802450 1 NC_009049.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rsp:RSP_2117 putative ComL lipoprotein; hypothetical protein 802450 4896352 Rsph17029_0792 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042675.1 801614 D 349101 CDS YP_001042676.1 126461562 4896358 802478..804118 1 NC_009049.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rsp:RSP_2118 DNA repair protein RecN; DNA repair protein RecN 804118 4896358 Rsph17029_0793 Rhodobacter sphaeroides ATCC 17029 DNA repair protein RecN YP_001042676.1 802478 D 349101 CDS YP_001042677.1 126461563 4896349 complement(804129..804521) 1 NC_009049.1 KEGG: rsp:RSP_2119 hypothetical protein; hypothetical protein 804521 4896349 Rsph17029_0794 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042677.1 804129 R 349101 CDS YP_001042678.1 126461564 4896346 complement(804518..805891) 1 NC_009049.1 PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_2120 putative D-lactate dehydrogenase (cytochrome), FAD/FMN-containing oxidoreductase; D-lactate dehydrogenase 805891 4896346 Rsph17029_0795 Rhodobacter sphaeroides ATCC 17029 D-lactate dehydrogenase YP_001042678.1 804518 R 349101 CDS YP_001042679.1 126461565 4896371 complement(806027..806656) 1 NC_009049.1 KEGG: rsp:RSP_2121 hypothetical protein; hypothetical protein 806656 4896371 Rsph17029_0796 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042679.1 806027 R 349101 CDS YP_001042680.1 126461566 4896368 complement(806861..807559) 1 NC_009049.1 PFAM: Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: rsp:RSP_2122 putative dimethylamine corrinoid protein; methionine synthase 807559 4896368 Rsph17029_0797 Rhodobacter sphaeroides ATCC 17029 methionine synthase YP_001042680.1 806861 R 349101 CDS YP_001042681.1 126461567 4896384 807716..808804 1 NC_009049.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rsp:RSP_2123 radical SAM domain protein; radical SAM domain-containing protein 808804 4896384 Rsph17029_0798 Rhodobacter sphaeroides ATCC 17029 radical SAM domain-containing protein YP_001042681.1 807716 D 349101 CDS YP_001042682.1 126461568 4896378 complement(808902..809909) 1 NC_009049.1 catalyzes the formation of methionine from L-homocysteine and S-adenosyl-L-methionine; methionine synthase I 809909 4896378 Rsph17029_0799 Rhodobacter sphaeroides ATCC 17029 methionine synthase I YP_001042682.1 808902 R 349101 CDS YP_001042683.1 126461569 4896409 complement(810121..810441) 1 NC_009049.1 PFAM: protein of unknown function DUF1476; KEGG: rsp:RSP_2125 hypothetical protein; hypothetical protein 810441 4896409 Rsph17029_0800 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042683.1 810121 R 349101 CDS YP_001042684.1 126461570 4896397 810624..811376 1 NC_009049.1 KEGG: rsp:RSP_2126 SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 811376 4896397 Rsph17029_0801 Rhodobacter sphaeroides ATCC 17029 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001042684.1 810624 D 349101 CDS YP_001042685.1 126461571 4896393 811391..811630 1 NC_009049.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: rsp:RSP_2127 component of phosphoribosylformylglycinamidine (FGAM) synthetase; phosphoribosylformylglycinamidine synthase subunit PurS 811630 4896393 Rsph17029_0802 Rhodobacter sphaeroides ATCC 17029 phosphoribosylformylglycinamidine synthase subunit PurS YP_001042685.1 811391 D 349101 CDS YP_001042686.1 126461572 4896424 811862..812530 1 NC_009049.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 812530 4896424 Rsph17029_0803 Rhodobacter sphaeroides ATCC 17029 phosphoribosylformylglycinamidine synthase I YP_001042686.1 811862 D 349101 CDS YP_001042687.1 126461573 4896418 812527..814341 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_2129 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 814341 4896418 Rsph17029_0804 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001042687.1 812527 D 349101 CDS YP_001042688.1 126461574 4896414 814351..815679 1 NC_009049.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_2130 two component, sigma54 specific transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 815679 4896414 Rsph17029_0805 Rhodobacter sphaeroides ATCC 17029 two component, sigma54 specific, Fis family transcriptional regulator YP_001042688.1 814351 D 349101 CDS YP_001042689.1 126461575 4896460 816186..818858 1 NC_009049.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: rsp:RSP_2131 ribonuclease E; ribonuclease 818858 4896460 Rsph17029_0806 Rhodobacter sphaeroides ATCC 17029 ribonuclease YP_001042689.1 816186 D 349101 CDS YP_001042690.1 126461576 4896455 complement(819039..819344) 1 NC_009049.1 PFAM: SirA family protein; KEGG: rsp:RSP_2132 protein of unknown function UPF0033; SirA family protein 819344 4896455 Rsph17029_0807 Rhodobacter sphaeroides ATCC 17029 SirA family protein YP_001042690.1 819039 R 349101 CDS YP_001042691.1 126461577 4896446 819411..820157 1 NC_009049.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rsp:RSP_2134 putative cytochrome c-type biogenesis protein CcdA; cytochrome c biogenesis protein, transmembrane region 820157 4896446 Rsph17029_0808 Rhodobacter sphaeroides ATCC 17029 cytochrome c biogenesis protein, transmembrane region YP_001042691.1 819411 D 349101 CDS YP_001042692.1 126461578 4896433 820186..821400 1 NC_009049.1 KEGG: rsp:RSP_2136 hypothetical protein; hypothetical protein 821400 4896433 Rsph17029_0809 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042692.1 820186 D 349101 CDS YP_001042693.1 126461579 4896482 complement(821382..821603) 1 NC_009049.1 KEGG: rsp:RSP_2135 hypothetical protein; hypothetical protein 821603 4896482 Rsph17029_0810 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042693.1 821382 R 349101 CDS YP_001042694.1 126461580 4896478 complement(821600..821803) 1 NC_009049.1 KEGG: rsp:RSP_2137 hypothetical protein; hypothetical protein 821803 4896478 Rsph17029_0811 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042694.1 821600 R 349101 CDS YP_001042695.1 126461581 4896479 complement(821803..823197) 1 NC_009049.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 823197 fumC 4896479 fumC Rhodobacter sphaeroides ATCC 17029 fumarate hydratase YP_001042695.1 821803 R 349101 CDS YP_001042696.1 126461582 4896466 complement(823364..823822) 1 NC_009049.1 PFAM: protein of unknown function DUF1321; KEGG: rsp:RSP_2139 hypothetical protein; hypothetical protein 823822 4896466 Rsph17029_0813 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042696.1 823364 R 349101 CDS YP_001042697.1 126461583 4896493 complement(823925..824617) 1 NC_009049.1 KEGG: rsp:RSP_2140 putative von Willebrand factor type A domain protein; von Willebrand factor type A domain-containing protein 824617 4896493 Rsph17029_0814 Rhodobacter sphaeroides ATCC 17029 von Willebrand factor type A domain-containing protein YP_001042697.1 823925 R 349101 CDS YP_001042698.1 126461584 4896489 complement(825504..826550) 1 NC_009049.1 KEGG: rsp:RSP_2141 ABC polyamine transporter, periplasmic substrate-binding protein; polyamine ABC transporter substrate-binding protein 826550 4896489 Rsph17029_0815 Rhodobacter sphaeroides ATCC 17029 polyamine ABC transporter substrate-binding protein YP_001042698.1 825504 R 349101 CDS YP_001042699.1 126461585 4896487 826952..828190 1 NC_009049.1 PFAM: aminotransferase, class V; KEGG: rsp:RSP_2142 NifS-related protein; class V aminotransferase 828190 4896487 Rsph17029_0816 Rhodobacter sphaeroides ATCC 17029 class V aminotransferase YP_001042699.1 826952 D 349101 CDS YP_001042700.1 126461586 4896480 828341..829756 1 NC_009049.1 PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: rsp:RSP_2143 DNA photolyase, cryptochrome 1 apoprotein (blue light photoreceptor); deoxyribodipyrimidine photo-lyase 829756 4896480 Rsph17029_0817 Rhodobacter sphaeroides ATCC 17029 deoxyribodipyrimidine photo-lyase YP_001042700.1 828341 D 349101 CDS YP_001042701.1 126461587 4896521 829790..831001 1 NC_009049.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_2144 cyclopropane-fatty-acyl-phospholipid synthase CfaS; cyclopropane-fatty-acyl-phospholipid synthase 831001 4896521 Rsph17029_0818 Rhodobacter sphaeroides ATCC 17029 cyclopropane-fatty-acyl-phospholipid synthase YP_001042701.1 829790 D 349101 CDS YP_001042702.1 126461588 4896508 831027..831467 1 NC_009049.1 KEGG: rsp:RSP_2145 tellurite resistance protein; tellurite resistance protein 831467 4896508 Rsph17029_0819 Rhodobacter sphaeroides ATCC 17029 tellurite resistance protein YP_001042702.1 831027 D 349101 CDS YP_001042703.1 126461589 4896584 831467..832552 1 NC_009049.1 PFAM: NUDIX hydrolase; KEGG: rsp:RSP_2146 tellurite resistance protein; NUDIX hydrolase 832552 4896584 Rsph17029_0820 Rhodobacter sphaeroides ATCC 17029 NUDIX hydrolase YP_001042703.1 831467 D 349101 CDS YP_001042704.1 126461590 4896617 832888..833922 1 NC_009049.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 833922 4896617 Rsph17029_0821 Rhodobacter sphaeroides ATCC 17029 cysteine synthase A YP_001042704.1 832888 D 349101 CDS YP_001042705.1 126461591 4896607 833926..836469 1 NC_009049.1 PFAM: MscS Mechanosensitive ion channel; KEGG: rsp:RSP_2148 small conductance mechanosensitive ion channel; mechanosensitive ion channel protein MscS 836469 4896607 Rsph17029_0822 Rhodobacter sphaeroides ATCC 17029 mechanosensitive ion channel protein MscS YP_001042705.1 833926 D 349101 CDS YP_001042706.1 126461592 4896605 836469..837188 1 NC_009049.1 PFAM: Threonyl/alanyl tRNA synthetase, SAD; KEGG: rsp:RSP_2149 alanyl-transfer RNA synthetase domain protein; threonyl/alanyl tRNA synthetase 837188 4896605 Rsph17029_0823 Rhodobacter sphaeroides ATCC 17029 threonyl/alanyl tRNA synthetase YP_001042706.1 836469 D 349101 CDS YP_001042707.1 126461593 4896614 complement(837314..838018) 1 NC_009049.1 PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2150 predicted glycosyl transferase, family 2; glycosyl transferase family protein 838018 4896614 Rsph17029_0824 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001042707.1 837314 R 349101 CDS YP_001042708.1 126461594 4896629 complement(838015..838566) 1 NC_009049.1 KEGG: rsp:RSP_2151 putative DedA family, membrane protein; DedA family membrane protein 838566 4896629 Rsph17029_0825 Rhodobacter sphaeroides ATCC 17029 DedA family membrane protein YP_001042708.1 838015 R 349101 CDS YP_001042709.1 126461595 4896877 complement(838563..839651) 1 NC_009049.1 KEGG: rsp:RSP_2152 putative ceramide glucosyltransferase; putative ceramide glucosyltransferase 839651 4896877 Rsph17029_0826 Rhodobacter sphaeroides ATCC 17029 putative ceramide glucosyltransferase YP_001042709.1 838563 R 349101 CDS YP_001042710.1 126461596 4896679 complement(839651..840457) 1 NC_009049.1 PFAM: metallophosphoesterase; KEGG: rsp:RSP_2153 hypothetical protein; metallophosphoesterase 840457 4896679 Rsph17029_0827 Rhodobacter sphaeroides ATCC 17029 metallophosphoesterase YP_001042710.1 839651 R 349101 CDS YP_001042711.1 126461597 4896714 complement(840591..841892) 1 NC_009049.1 KEGG: rsp:RSP_2154 hypothetical protein; hypothetical protein 841892 4896714 Rsph17029_0828 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042711.1 840591 R 349101 CDS YP_001042712.1 126461598 4896765 complement(841894..843219) 1 NC_009049.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 843219 hisD 4896765 hisD Rhodobacter sphaeroides ATCC 17029 histidinol dehydrogenase YP_001042712.1 841894 R 349101 CDS YP_001042713.1 126461599 4896779 complement(843229..844026) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2156 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 844026 4896779 Rsph17029_0830 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042713.1 843229 R 349101 CDS YP_001042714.1 126461600 4896814 complement(844023..844958) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2157 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 844958 4896814 Rsph17029_0831 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042714.1 844023 R 349101 CDS YP_001042715.1 126461601 4896808 complement(845506..846603) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2158 ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 846603 4896808 Rsph17029_0832 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001042715.1 845506 R 349101 CDS YP_001042716.1 126461602 4896851 complement(846623..847756) 1 NC_009049.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_2159 ABC transporter, ATPase subunit; ABC transporter 847756 4896851 Rsph17029_0833 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042716.1 846623 R 349101 CDS YP_001042717.1 126461603 4896666 complement(847833..848597) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2160 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 848597 4896666 Rsph17029_0834 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001042717.1 847833 R 349101 CDS YP_001042718.1 126461604 4896690 complement(848793..849500) 1 NC_009049.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: rsp:RSP_2161 efflux channel; PA-phosphatase-like phosphoesterase 849500 4896690 Rsph17029_0835 Rhodobacter sphaeroides ATCC 17029 PA-phosphatase-like phosphoesterase YP_001042718.1 848793 R 349101 CDS YP_001042719.1 126461605 4896789 849796..850599 1 NC_009049.1 KEGG: rsp:RSP_2163 lytic murein transglycosylase, putative; lytic murein transglycosylase 850599 4896789 Rsph17029_0836 Rhodobacter sphaeroides ATCC 17029 lytic murein transglycosylase YP_001042719.1 849796 D 349101 CDS YP_001042720.1 126461606 4897152 complement(850966..851442) 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_2165 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 851442 4897152 Rsph17029_0837 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001042720.1 850966 R 349101 CDS YP_001042721.1 126461607 4896812 851532..854972 1 NC_009049.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 854972 4896812 Rsph17029_0838 Rhodobacter sphaeroides ATCC 17029 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001042721.1 851532 D 349101 CDS YP_001042722.1 126461608 4896849 855205..855945 1 NC_009049.1 PFAM: Rhomboid family protein; KEGG: rsp:RSP_2167 hypothetical protein; rhomboid family protein 855945 4896849 Rsph17029_0839 Rhodobacter sphaeroides ATCC 17029 rhomboid family protein YP_001042722.1 855205 D 349101 CDS YP_001042723.1 126461609 4896658 855942..856298 1 NC_009049.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_2168 hypothetical protein; glutathione-dependent formaldehyde-activating protein 856298 4896658 Rsph17029_0840 Rhodobacter sphaeroides ATCC 17029 glutathione-dependent formaldehyde-activating protein YP_001042723.1 855942 D 349101 CDS YP_001042724.1 126461610 4896678 complement(856523..857308) 1 NC_009049.1 PFAM: inositol monophosphatase; KEGG: rsp:RSP_2169 inositol monophosphatase family protein; inositol monophosphatase 857308 4896678 Rsph17029_0841 Rhodobacter sphaeroides ATCC 17029 inositol monophosphatase YP_001042724.1 856523 R 349101 CDS YP_001042725.1 126461611 4896801 complement(857441..858958) 1 NC_009049.1 PFAM: phosphate transporter; KEGG: rsp:RSP_2170 phosphate transporter, Pit family; phosphate transporter 858958 4896801 Rsph17029_0842 Rhodobacter sphaeroides ATCC 17029 phosphate transporter YP_001042725.1 857441 R 349101 CDS YP_001042726.1 126461612 4896833 complement(859086..859991) 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2171 transcriptional regulator, LysR family; LysR family transcriptional regulator 859991 4896833 Rsph17029_0843 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001042726.1 859086 R 349101 CDS YP_001042727.1 126461613 4896815 860086..860952 1 NC_009049.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: rsp:RSP_2172 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 860952 4896815 Rsph17029_0844 Rhodobacter sphaeroides ATCC 17029 5,10-methylenetetrahydrofolate reductase YP_001042727.1 860086 D 349101 CDS YP_001042728.1 126461614 4896864 complement(861099..861644) 1 NC_009049.1 PFAM: BioY protein; KEGG: rsp:RSP_2173 putative biotin biosynthesis protein BioY; BioY protein 861644 4896864 Rsph17029_0845 Rhodobacter sphaeroides ATCC 17029 BioY protein YP_001042728.1 861099 R 349101 CDS YP_001042729.1 126461615 4896615 complement(861658..862254) 1 NC_009049.1 PFAM: cobalt transport protein; KEGG: rsp:RSP_2174 putative ABC transporter, inner membrane subunit; cobalt transport protein 862254 4896615 Rsph17029_0846 Rhodobacter sphaeroides ATCC 17029 cobalt transport protein YP_001042729.1 861658 R 349101 CDS YP_001042730.1 126461616 4896636 complement(862229..862969) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2175 ABC transporter, ATPase subunit; ABC transporter 862969 4896636 Rsph17029_0847 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042730.1 862229 R 349101 CDS YP_001042731.1 126461617 4896626 complement(863233..864510) 1 NC_009049.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 864510 4896626 Rsph17029_0848 Rhodobacter sphaeroides ATCC 17029 4-aminobutyrate aminotransferase YP_001042731.1 863233 R 349101 CDS YP_001042732.1 126461618 4897012 864763..865881 1 NC_009049.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rsp:RSP_2177 DNA processing protein; DNA protecting protein DprA 865881 4897012 Rsph17029_0849 Rhodobacter sphaeroides ATCC 17029 DNA protecting protein DprA YP_001042732.1 864763 D 349101 CDS YP_001042733.1 126461619 4896428 866129..868783 1 NC_009049.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 868783 4896428 Rsph17029_0850 Rhodobacter sphaeroides ATCC 17029 DNA topoisomerase I YP_001042733.1 866129 D 349101 CDS YP_001042734.1 126461620 4895957 complement(868832..869860) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2179 ABC glycine betaine/L-proline tranporter, ATPase subunit, ProV; ABC transporter 869860 4895957 Rsph17029_0851 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042734.1 868832 R 349101 CDS YP_001042735.1 126461621 4896483 complement(869857..870711) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2180 ABC glycine betaine/L-proline transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 870711 4896483 Rsph17029_0852 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042735.1 869857 R 349101 CDS YP_001042736.1 126461622 4897933 complement(870816..871742) 1 NC_009049.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rsp:RSP_2181 ABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit; substrate-binding region of ABC-type glycine betaine transport system 871742 4897933 Rsph17029_0853 Rhodobacter sphaeroides ATCC 17029 substrate-binding region of ABC-type glycine betaine transport system YP_001042736.1 870816 R 349101 CDS YP_001042737.1 126461623 4897830 871829..872413 1 NC_009049.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 872413 4897830 Rsph17029_0854 Rhodobacter sphaeroides ATCC 17029 transcriptional regulator BetI YP_001042737.1 871829 D 349101 CDS YP_001042738.1 126461624 4897794 872410..873861 1 NC_009049.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 873861 4897794 Rsph17029_0855 Rhodobacter sphaeroides ATCC 17029 betaine aldehyde dehydrogenase YP_001042738.1 872410 D 349101 CDS YP_001042739.1 126461625 4897811 873871..875517 1 NC_009049.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 875517 4897811 Rsph17029_0856 Rhodobacter sphaeroides ATCC 17029 choline dehydrogenase YP_001042739.1 873871 D 349101 CDS YP_001042740.1 126461626 4897793 875632..876276 1 NC_009049.1 PFAM: nuclease (SNase domain protein); KEGG: rsp:RSP_2185 nuclease (SNase-like); nuclease 876276 4897793 Rsph17029_0857 Rhodobacter sphaeroides ATCC 17029 nuclease YP_001042740.1 875632 D 349101 CDS YP_001042741.1 126461627 4897696 complement(876584..877969) 1 NC_009049.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rsp:RSP_2186 transcriptional regulator, MerR family; hypothetical protein 877969 4897696 Rsph17029_0858 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042741.1 876584 R 349101 CDS YP_001042742.1 126461628 4897708 complement(878031..879251) 1 NC_009049.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2187 multidrug efflux pump, major facilitator superfamily (MFS); Bcr/CflA subfamily drug resistance transporter 879251 4897708 Rsph17029_0859 Rhodobacter sphaeroides ATCC 17029 Bcr/CflA subfamily drug resistance transporter YP_001042742.1 878031 R 349101 CDS YP_001042743.1 126461629 4896921 complement(879288..879641) 1 NC_009049.1 PFAM: protein of unknown function DUF486; KEGG: rsp:RSP_2188 hypothetical protein; hypothetical protein 879641 4896921 Rsph17029_0860 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042743.1 879288 R 349101 CDS YP_001042744.1 126461630 4896946 879770..881302 1 NC_009049.1 PFAM: carboxyl transferase; KEGG: rsp:RSP_2189 propionyl-CoA carboxylase beta chain; carboxyl transferase 881302 4896946 Rsph17029_0861 Rhodobacter sphaeroides ATCC 17029 carboxyl transferase YP_001042744.1 879770 D 349101 CDS YP_001042745.1 126461631 4897066 881454..881801 1 NC_009049.1 KEGG: rsp:RSP_6040 hypothetical protein; hypothetical protein 881801 4897066 Rsph17029_0862 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042745.1 881454 D 349101 CDS YP_001042746.1 126461632 4897054 882223..882621 1 NC_009049.1 KEGG: rsp:RSP_2190 hypothetical protein; hypothetical protein 882621 4897054 Rsph17029_0863 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042746.1 882223 D 349101 CDS YP_001042747.1 126461633 4896253 882935..883162 1 NC_009049.1 KEGG: rsp:RSP_6221 hypothetical protein; hypothetical protein 883162 4896253 Rsph17029_0864 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042747.1 882935 D 349101 CDS YP_001042748.1 126461634 4898057 883345..885345 1 NC_009049.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: rsp:RSP_2191 propionyl-CoA carboxylase alpha subunit; carbamoyl-phosphate synthase subunit L 885345 4898057 Rsph17029_0865 Rhodobacter sphaeroides ATCC 17029 carbamoyl-phosphate synthase subunit L YP_001042748.1 883345 D 349101 CDS YP_001042749.1 126461635 4896904 complement(885347..885808) 1 NC_009049.1 KEGG: rsp:RSP_6041 hypothetical protein; hypothetical protein 885808 4896904 Rsph17029_0866 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042749.1 885347 R 349101 CDS YP_001042750.1 126461636 4896924 885882..888011 1 NC_009049.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 888011 4896924 Rsph17029_0867 Rhodobacter sphaeroides ATCC 17029 methylmalonyl-CoA mutase YP_001042750.1 885882 D 349101 CDS YP_001042751.1 126461637 4896943 888576..889709 1 NC_009049.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 889709 gcvT 4896943 gcvT Rhodobacter sphaeroides ATCC 17029 glycine cleavage system aminomethyltransferase T YP_001042751.1 888576 D 349101 CDS YP_001042752.1 126461638 4896925 889718..890074 1 NC_009049.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 890074 4896925 Rsph17029_0869 Rhodobacter sphaeroides ATCC 17029 glycine cleavage system protein H YP_001042752.1 889718 D 349101 CDS YP_001042753.1 126461639 4896994 890078..892948 1 NC_009049.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 892948 4896994 Rsph17029_0870 Rhodobacter sphaeroides ATCC 17029 glycine dehydrogenase YP_001042753.1 890078 D 349101 CDS YP_001042754.1 126461640 4897682 complement(893122..895323) 1 NC_009049.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rsp:RSP_2196 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase 895323 4897682 Rsph17029_0871 Rhodobacter sphaeroides ATCC 17029 3-hydroxyacyl-CoA dehydrogenase YP_001042754.1 893122 R 349101 CDS YP_001042755.1 126461641 4896988 complement(895338..896549) 1 NC_009049.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 896549 4896988 Rsph17029_0872 Rhodobacter sphaeroides ATCC 17029 acetyl-CoA acetyltransferase YP_001042755.1 895338 R 349101 CDS YP_001042756.1 126461642 4897106 complement(896620..897063) 1 NC_009049.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_2198 hypothetical protein; glutathione-dependent formaldehyde-activating protein 897063 4897106 Rsph17029_0873 Rhodobacter sphaeroides ATCC 17029 glutathione-dependent formaldehyde-activating protein YP_001042756.1 896620 R 349101 CDS YP_001042757.1 126461643 4897574 complement(897089..898864) 1 NC_009049.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rsp:RSP_2199 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 898864 4897574 Rsph17029_0874 Rhodobacter sphaeroides ATCC 17029 acyl-CoA dehydrogenase domain-containing protein YP_001042757.1 897089 R 349101 CDS YP_001042758.1 126461644 4897680 complement(898883..899278) 1 NC_009049.1 PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2200 transcriptional regulator, MerR family; MerR family transcriptional regulator 899278 4897680 Rsph17029_0875 Rhodobacter sphaeroides ATCC 17029 MerR family transcriptional regulator YP_001042758.1 898883 R 349101 CDS YP_001042759.1 126461645 4897409 complement(899403..899783) 1 NC_009049.1 PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2201 transcriptional regulator, MerR family; MerR family transcriptional regulator 899783 4897409 Rsph17029_0876 Rhodobacter sphaeroides ATCC 17029 MerR family transcriptional regulator YP_001042759.1 899403 R 349101 CDS YP_001042760.1 126461646 4897710 899891..900382 1 NC_009049.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_2202 hypothetical protein; hypothetical protein 900382 4897710 Rsph17029_0877 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042760.1 899891 D 349101 CDS YP_001042761.1 126461647 4897704 900379..900885 1 NC_009049.1 PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_2203 hypothetical protein; thioesterase superfamily protein 900885 4897704 Rsph17029_0878 Rhodobacter sphaeroides ATCC 17029 thioesterase superfamily protein YP_001042761.1 900379 D 349101 CDS YP_001042762.1 126461648 4897722 900878..902212 1 NC_009049.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rsp:RSP_2204 multidrug efflux pump, MATE family; MATE efflux family protein 902212 4897722 Rsph17029_0879 Rhodobacter sphaeroides ATCC 17029 MATE efflux family protein YP_001042762.1 900878 D 349101 CDS YP_001042763.1 126461649 4897843 complement(902224..902982) 1 NC_009049.1 KEGG: rsp:RSP_2205 hypothetical protein; hypothetical protein 902982 4897843 Rsph17029_0880 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042763.1 902224 R 349101 CDS YP_001042764.1 126461650 4897741 complement(902979..903899) 1 NC_009049.1 PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_2206 hypothetical protein; hypothetical protein 903899 4897741 Rsph17029_0881 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042764.1 902979 R 349101 CDS YP_001042765.1 126461651 4897854 complement(903984..904784) 1 NC_009049.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 904784 4897854 Rsph17029_0882 Rhodobacter sphaeroides ATCC 17029 purine nucleoside phosphorylase YP_001042765.1 903984 R 349101 CDS YP_001042766.1 126461652 4897849 complement(904786..905754) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2208 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 905754 4897849 Rsph17029_0883 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001042766.1 904786 R 349101 CDS YP_001042767.1 126461653 4897939 complement(905751..906845) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2209 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 906845 4897939 Rsph17029_0884 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001042767.1 905751 R 349101 CDS YP_001042768.1 126461654 4897871 complement(906845..908422) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2210 ABC sugar transporter, fused ATPase subunits; ABC transporter 908422 4897871 Rsph17029_0885 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042768.1 906845 R 349101 CDS YP_001042769.1 126461655 4897905 complement(908423..909418) 1 NC_009049.1 PFAM: basic membrane lipoprotein; KEGG: rsp:RSP_2211 ABC transporter, periplasmic substrate-binding protein; basic membrane lipoprotein 909418 4897905 Rsph17029_0886 Rhodobacter sphaeroides ATCC 17029 basic membrane lipoprotein YP_001042769.1 908423 R 349101 CDS YP_001042770.1 126461656 4895664 complement(909572..910054) 1 NC_009049.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2212 putative acetyltransferase; ribosomal-protein-alanine acetyltransferase 910054 4895664 Rsph17029_0887 Rhodobacter sphaeroides ATCC 17029 ribosomal-protein-alanine acetyltransferase YP_001042770.1 909572 R 349101 CDS YP_001042771.1 126461657 4897908 complement(910051..910659) 1 NC_009049.1 PFAM: peptidase M22, glycoprotease; KEGG: rsp:RSP_2213 hypothetical protein; peptidase M22, glycoprotease 910659 4897908 Rsph17029_0888 Rhodobacter sphaeroides ATCC 17029 peptidase M22, glycoprotease YP_001042771.1 910051 R 349101 CDS YP_001042772.1 126461658 4897810 complement(910649..911209) 1 NC_009049.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rsp:RSP_2214 nitrogen-fixing NifU; NifU domain-containing protein 911209 4897810 Rsph17029_0889 Rhodobacter sphaeroides ATCC 17029 NifU domain-containing protein YP_001042772.1 910649 R 349101 CDS YP_001042773.1 126461659 4897989 complement(911356..911811) 1 NC_009049.1 PFAM: UspA domain protein; KEGG: rsp:RSP_2215 hypothetical protein; UspA domain-containing protein 911811 4897989 Rsph17029_0890 Rhodobacter sphaeroides ATCC 17029 UspA domain-containing protein YP_001042773.1 911356 R 349101 CDS YP_001042774.1 126461660 4897489 complement(911865..912728) 1 NC_009049.1 PFAM: aminotransferase, class IV; KEGG: rsp:RSP_2216 branched-chain amino acid aminotransferase; aminotransferase 912728 4897489 Rsph17029_0891 Rhodobacter sphaeroides ATCC 17029 aminotransferase YP_001042774.1 911865 R 349101 CDS YP_001042775.1 126461661 4897528 complement(912799..913278) 1 NC_009049.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_2217 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 913278 4897528 Rsph17029_0892 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001042775.1 912799 R 349101 CDS YP_001042776.1 126461662 4897278 913542..914084 1 NC_009049.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_2218 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 914084 4897278 Rsph17029_0893 Rhodobacter sphaeroides ATCC 17029 ErfK/YbiS/YcfS/YnhG family protein YP_001042776.1 913542 D 349101 CDS YP_001042777.1 126461663 4897309 complement(914119..915000) 1 NC_009049.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: rsp:RSP_2219 putative lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 915000 4897309 Rsph17029_0894 Rhodobacter sphaeroides ATCC 17029 lipid A biosynthesis acyltransferase YP_001042777.1 914119 R 349101 CDS YP_001042778.1 126461664 4896447 complement(915299..916372) 1 NC_009049.1 PFAM: flagellar motor switch protein FliG; KEGG: rsp:RSP_2220 possible flagellar motor switch protein (FliG); flagellar motor switch protein FliG 916372 4896447 Rsph17029_0895 Rhodobacter sphaeroides ATCC 17029 flagellar motor switch protein FliG YP_001042778.1 915299 R 349101 CDS YP_001042779.1 126461665 4897286 complement(916432..916587) 1 NC_009049.1 KEGG: rsp:RSP_6042 hypothetical protein; hypothetical protein 916587 4897286 Rsph17029_0896 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042779.1 916432 R 349101 CDS YP_001042780.1 126461666 4897113 complement(916715..918019) 1 NC_009049.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 918019 4897113 Rsph17029_0897 Rhodobacter sphaeroides ATCC 17029 adenylosuccinate lyase YP_001042780.1 916715 R 349101 CDS YP_001042781.1 126461667 4897872 complement(918127..918381) 1 NC_009049.1 PFAM: protein of unknown function DUF333; KEGG: rsp:RSP_2222 hypothetical protein; hypothetical protein 918381 4897872 Rsph17029_0898 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042781.1 918127 R 349101 CDS YP_001042782.1 126461668 4897014 complement(918539..921685) 1 NC_009049.1 PFAM: acriflavin resistance protein; KEGG: rsp:RSP_2223 AcrB/AcrD/AcrF multidrug efflux pump; acriflavin resistance protein 921685 4897014 Rsph17029_0899 Rhodobacter sphaeroides ATCC 17029 acriflavin resistance protein YP_001042782.1 918539 R 349101 CDS YP_001042783.1 126461669 4897816 complement(921689..922855) 1 NC_009049.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2224 multidrug efflux pump, membrane fusion protein (MFP) family; RND family efflux transporter MFP subunit 922855 4897816 Rsph17029_0900 Rhodobacter sphaeroides ATCC 17029 RND family efflux transporter MFP subunit YP_001042783.1 921689 R 349101 CDS YP_001042784.1 126461670 4897896 923098..923769 1 NC_009049.1 KEGG: rsp:RSP_2225 hypothetical protein; hypothetical protein 923769 4897896 Rsph17029_0901 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042784.1 923098 D 349101 CDS YP_001042785.1 126461671 4897795 complement(924037..926121) 1 NC_009049.1 KEGG: rsp:RSP_2226 glycosidase; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 926121 4897795 Rsph17029_0902 Rhodobacter sphaeroides ATCC 17029 glycogen debranching protein GlgX YP_001042785.1 924037 R 349101 CDS YP_001042786.1 126461672 4897785 complement(926118..927386) 1 NC_009049.1 PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_2227 ADP-glucose pyrophosphorylase; nucleotidyl transferase 927386 4897785 Rsph17029_0903 Rhodobacter sphaeroides ATCC 17029 nucleotidyl transferase YP_001042786.1 926118 R 349101 CDS YP_001042787.1 126461673 4897683 complement(927817..928347) 1 NC_009049.1 TIGRFAM: PAS sensor protein; KEGG: rsp:RSP_2228 PAS domain containing protein; putative PAS/PAC sensor protein 928347 4897683 Rsph17029_0904 Rhodobacter sphaeroides ATCC 17029 putative PAS/PAC sensor protein YP_001042787.1 927817 R 349101 CDS YP_001042788.1 126461674 4895479 928419..931931 1 NC_009049.1 KEGG: rsp:RSP_2229 chemotaxis multidomain, CheB methylesterase/CheR, methylase; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; HWE histidine kinase; PAS fold-4 domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 931931 4895479 Rsph17029_0905 Rhodobacter sphaeroides ATCC 17029 putative PAS/PAC sensor protein YP_001042788.1 928419 D 349101 CDS YP_001042789.1 126461675 4895327 931951..932265 1 NC_009049.1 KEGG: rsp:RSP_2230 response regulator receiver domain protein; response regulator receiver/SARP domain-containing protein 932265 4895327 Rsph17029_0906 Rhodobacter sphaeroides ATCC 17029 response regulator receiver/SARP domain-containing protein YP_001042789.1 931951 D 349101 CDS YP_001042790.1 126461676 4896501 932492..932746 1 NC_009049.1 KEGG: rsp:RSP_2231 hypothetical protein; hypothetical protein 932746 4896501 Rsph17029_0907 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042790.1 932492 D 349101 CDS YP_001042791.1 126461677 4895181 complement(933127..934584) 1 NC_009049.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rsp:RSP_2232 putative uracil-DNA glycosylase; phage SPO1 DNA polymerase-related protein 934584 4895181 Rsph17029_0908 Rhodobacter sphaeroides ATCC 17029 phage SPO1 DNA polymerase-related protein YP_001042791.1 933127 R 349101 CDS YP_001042792.1 126461678 4895547 complement(934584..935804) 1 NC_009049.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rsp:RSP_2234 predicted DNA-binding protein; radical SAM domain-containing protein 935804 4895547 Rsph17029_0909 Rhodobacter sphaeroides ATCC 17029 radical SAM domain-containing protein YP_001042792.1 934584 R 349101 CDS YP_001042793.1 126461679 4896523 complement(935887..936948) 1 NC_009049.1 PFAM: beta-lactamase; KEGG: rsp:RSP_2235 hypothetical protein; beta-lactamase 936948 4896523 Rsph17029_0910 Rhodobacter sphaeroides ATCC 17029 beta-lactamase YP_001042793.1 935887 R 349101 CDS YP_001042794.1 126461680 4897084 937030..937497 1 NC_009049.1 PFAM: regulatory protein, MarR; KEGG: rsp:RSP_2236 transcriptional regulator, MarR family; MarR family transcriptional regulator 937497 4897084 Rsph17029_0911 Rhodobacter sphaeroides ATCC 17029 MarR family transcriptional regulator YP_001042794.1 937030 D 349101 CDS YP_001042795.1 126461681 4896920 937494..938600 1 NC_009049.1 PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2237 membrane fusion protein (MFP) family protein; secretion protein HlyD family protein 938600 4896920 Rsph17029_0912 Rhodobacter sphaeroides ATCC 17029 secretion protein HlyD family protein YP_001042795.1 937494 D 349101 CDS YP_001042796.1 126461682 4895689 938614..940137 1 NC_009049.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2238 multidrug efflux pump, major facilitator superfamily (MFS); EmrB/QacA family drug resistance transporter 940137 4895689 Rsph17029_0913 Rhodobacter sphaeroides ATCC 17029 EmrB/QacA family drug resistance transporter YP_001042796.1 938614 D 349101 CDS YP_001042797.1 126461683 4895231 940926..941711 1 NC_009049.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: rsp:RSP_2239 tRNA/rRNA metyltransferase; RNA methyltransferase 941711 4895231 Rsph17029_0914 Rhodobacter sphaeroides ATCC 17029 RNA methyltransferase YP_001042797.1 940926 D 349101 CDS YP_001042798.1 126461684 4897941 941900..942346 1 NC_009049.1 PFAM: CoA-binding domain protein; KEGG: rsp:RSP_2240 hypothetical protein; CoA-binding domain-containing protein 942346 4897941 Rsph17029_0915 Rhodobacter sphaeroides ATCC 17029 CoA-binding domain-containing protein YP_001042798.1 941900 D 349101 CDS YP_001042799.1 126461685 4896169 complement(942548..942859) 1 NC_009049.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 942859 hisE 4896169 hisE Rhodobacter sphaeroides ATCC 17029 phosphoribosyl-ATP pyrophosphatase YP_001042799.1 942548 R 349101 CDS YP_001042800.1 126461686 4895971 complement(942856..943617) 1 NC_009049.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 943617 4895971 Rsph17029_0917 Rhodobacter sphaeroides ATCC 17029 imidazole glycerol phosphate synthase subunit HisF YP_001042800.1 942856 R 349101 CDS YP_001042801.1 126461687 4896706 complement(943752..944471) 1 NC_009049.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 944471 4896706 Rsph17029_0918 Rhodobacter sphaeroides ATCC 17029 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001042801.1 943752 R 349101 CDS YP_001042802.1 126461688 4896463 944611..944991 1 NC_009049.1 KEGG: rsp:RSP_2244 hypothetical protein; hypothetical protein 944991 4896463 Rsph17029_0919 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042802.1 944611 D 349101 CDS YP_001042803.1 126461689 4897218 complement(945215..945853) 1 NC_009049.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 945853 hisH 4897218 hisH Rhodobacter sphaeroides ATCC 17029 imidazole glycerol phosphate synthase subunit HisH YP_001042803.1 945215 R 349101 CDS YP_001042804.1 126461690 4895981 complement(945853..946440) 1 NC_009049.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 946440 hisB 4895981 hisB Rhodobacter sphaeroides ATCC 17029 imidazoleglycerol-phosphate dehydratase YP_001042804.1 945853 R 349101 CDS YP_001042805.1 126461691 4895854 946677..948680 1 NC_009049.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 948680 4895854 Rsph17029_0922 Rhodobacter sphaeroides ATCC 17029 elongation factor G YP_001042805.1 946677 D 349101 CDS YP_001042806.1 126461692 4895144 complement(948819..950039) 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2249 multidrug (tetracycline) efflux pump, major facilitator superfamily (MFS); major facilitator superfamily transporter 950039 4895144 Rsph17029_0923 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001042806.1 948819 R 349101 CDS YP_001042807.1 126461693 4895425 complement(950070..950798) 1 NC_009049.1 KEGG: rsp:RSP_2250 hypothetical protein; hypothetical protein 950798 4895425 Rsph17029_0924 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042807.1 950070 R 349101 CDS YP_001042808.1 126461694 4895980 complement(950791..951579) 1 NC_009049.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_2251 putative beta-ketoadipate enol-lactone hydrolase; 3-oxoadipate enol-lactonase 951579 4895980 Rsph17029_0925 Rhodobacter sphaeroides ATCC 17029 3-oxoadipate enol-lactonase YP_001042808.1 950791 R 349101 CDS YP_001042809.1 126461695 4896952 complement(951807..952784) 1 NC_009049.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rsp:RSP_2252 threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta 952784 4896952 Rsph17029_0926 Rhodobacter sphaeroides ATCC 17029 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001042809.1 951807 R 349101 CDS YP_001042810.1 126461696 4896934 complement(952781..953605) 1 NC_009049.1 PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_2253 predicted hydrolase or acyltransferase; alpha/beta hydrolase 953605 4896934 Rsph17029_0927 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001042810.1 952781 R 349101 CDS YP_001042811.1 126461697 4897630 953963..955750 1 NC_009049.1 KEGG: rsp:RSP_2254 ABC efflux transporter, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 955750 4897630 Rsph17029_0928 Rhodobacter sphaeroides ATCC 17029 lipid ABC transporter ATPase/inner membrane protein YP_001042811.1 953963 D 349101 CDS YP_001042812.1 126461698 4897272 955856..957745 1 NC_009049.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 957745 4897272 Rsph17029_0929 Rhodobacter sphaeroides ATCC 17029 AMP-binding protein YP_001042812.1 955856 D 349101 CDS YP_001042813.1 126461699 4895645 complement(958116..958553) 1 NC_009049.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 958553 4895645 Rsph17029_0930 Rhodobacter sphaeroides ATCC 17029 D-tyrosyl-tRNA(Tyr) deacylase YP_001042813.1 958116 R 349101 CDS YP_001042814.1 126461700 4897621 complement(958553..959473) 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_2257 putative fructokinase; ribokinase-like domain-containing protein 959473 4897621 Rsph17029_0931 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001042814.1 958553 R 349101 CDS YP_001042815.1 126461701 4896432 complement(959487..960446) 1 NC_009049.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 960446 4896432 Rsph17029_0932 Rhodobacter sphaeroides ATCC 17029 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001042815.1 959487 R 349101 CDS YP_001042816.1 126461702 4898003 complement(960513..960950) 1 NC_009049.1 KEGG: rsp:RSP_2259 transmembrane protein; transmembrane protein 960950 4898003 Rsph17029_0933 Rhodobacter sphaeroides ATCC 17029 transmembrane protein YP_001042816.1 960513 R 349101 CDS YP_001042817.1 126461703 4897358 complement(960955..962052) 1 NC_009049.1 KEGG: rsp:RSP_2260 hypothetical protein; hypothetical protein 962052 4897358 Rsph17029_0934 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042817.1 960955 R 349101 CDS YP_001042818.1 126461704 4897449 complement(962054..963163) 1 NC_009049.1 KEGG: rsp:RSP_2261 antifreeze protein, type I; antifreeze protein, type I 963163 4897449 Rsph17029_0935 Rhodobacter sphaeroides ATCC 17029 antifreeze protein, type I YP_001042818.1 962054 R 349101 CDS YP_001042819.1 126461705 4897305 complement(963344..963982) 1 NC_009049.1 KEGG: rsp:RSP_2262 hypothetical protein; hypothetical protein 963982 4897305 Rsph17029_0936 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042819.1 963344 R 349101 CDS YP_001042820.1 126461706 4896984 complement(963998..964963) 1 NC_009049.1 KEGG: rsp:RSP_2263 hypothetical protein; hypothetical protein 964963 4896984 Rsph17029_0937 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042820.1 963998 R 349101 CDS YP_001042821.1 126461707 4896459 complement(964976..966166) 1 NC_009049.1 PFAM: toxic anion resistance family protein; KEGG: rsp:RSP_2264 tellurite resistance protein; toxic anion resistance family protein 966166 4896459 Rsph17029_0938 Rhodobacter sphaeroides ATCC 17029 toxic anion resistance family protein YP_001042821.1 964976 R 349101 CDS YP_001042822.1 126461708 4896885 complement(966315..967193) 1 NC_009049.1 KEGG: rsp:RSP_2265 hypothetical protein; hypothetical protein 967193 4896885 Rsph17029_0939 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042822.1 966315 R 349101 CDS YP_001042823.1 126461709 4895386 complement(967378..968847) 1 NC_009049.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rsp:RSP_2266 pseudouridine synthase, (predicted); RNA-binding S4 domain-containing protein 968847 4895386 Rsph17029_0940 Rhodobacter sphaeroides ATCC 17029 RNA-binding S4 domain-containing protein YP_001042823.1 967378 R 349101 CDS YP_001042824.1 126461710 4898022 969181..969633 1 NC_009049.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rsp:RSP_2267 putative cytidine deaminase; zinc-binding CMP/dCMP deaminase 969633 4898022 Rsph17029_0941 Rhodobacter sphaeroides ATCC 17029 zinc-binding CMP/dCMP deaminase YP_001042824.1 969181 D 349101 CDS YP_001042825.1 126461711 4897729 complement(969644..970336) 1 NC_009049.1 PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_2268 metallo beta lactamase superfamily; beta-lactamase domain-containing protein 970336 4897729 Rsph17029_0942 Rhodobacter sphaeroides ATCC 17029 beta-lactamase domain-containing protein YP_001042825.1 969644 R 349101 CDS YP_001042826.1 126461712 4897295 970399..971055 1 NC_009049.1 KEGG: rsp:RSP_6222 hypothetical protein; hypothetical protein 971055 4897295 Rsph17029_0943 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042826.1 970399 D 349101 CDS YP_001042827.1 126461713 4897048 971087..971374 1 NC_009049.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 971374 gatC 4897048 gatC Rhodobacter sphaeroides ATCC 17029 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001042827.1 971087 D 349101 CDS YP_001042828.1 126461714 4896823 971371..972846 1 NC_009049.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 972846 gatA 4896823 gatA Rhodobacter sphaeroides ATCC 17029 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001042828.1 971371 D 349101 CDS YP_001042829.1 126461715 4896732 972882..973682 1 NC_009049.1 KEGG: rsp:RSP_2271 hypothetical protein; hypothetical protein 973682 4896732 Rsph17029_0946 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042829.1 972882 D 349101 CDS YP_001042830.1 126461716 4896481 973686..974357 1 NC_009049.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: rsp:RSP_2272 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 974357 4896481 Rsph17029_0947 Rhodobacter sphaeroides ATCC 17029 N-acetylmuramoyl-L-alanine amidase YP_001042830.1 973686 D 349101 CDS YP_001042831.1 126461717 4897752 complement(974845..976059) 1 NC_009049.1 KEGG: rsp:RSP_2273 putative anaerobic phenylacetate CoA ligase; putative anaerobic phenylacetate CoA ligase 976059 4897752 Rsph17029_0948 Rhodobacter sphaeroides ATCC 17029 putative anaerobic phenylacetate CoA ligase YP_001042831.1 974845 R 349101 CDS YP_001042832.1 126461718 4895407 complement(976074..976904) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2274 ABC branched amino acid transporter family, ATPase subunit; ABC transporter 976904 4895407 Rsph17029_0949 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042832.1 976074 R 349101 CDS YP_001042833.1 126461719 4895242 complement(976991..978280) 1 NC_009049.1 KEGG: rsp:RSP_2275 ABC branched amino acid transporter family, periplasmic substrate-binding subunit; branched chain amino acid ABC transporter substrate-binding protein 978280 4895242 Rsph17029_0950 Rhodobacter sphaeroides ATCC 17029 branched chain amino acid ABC transporter substrate-binding protein YP_001042833.1 976991 R 349101 CDS YP_001042834.1 126461720 4896792 complement(978341..979417) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2276 ABC branched amino acid transporter family, inner membrane subunit; inner-membrane translocator 979417 4896792 Rsph17029_0951 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001042834.1 978341 R 349101 CDS YP_001042835.1 126461721 4895758 complement(979421..980410) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2277 ABC branched amino acid transporter family, inner membrane subunit; inner-membrane translocator 980410 4895758 Rsph17029_0952 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001042835.1 979421 R 349101 CDS YP_001042836.1 126461722 4896456 complement(980545..981369) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2278 ABC branched amino acid transporter family, ATPase subunit; ABC transporter 981369 4896456 Rsph17029_0953 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042836.1 980545 R 349101 CDS YP_001042837.1 126461723 4895369 complement(981366..983327) 1 NC_009049.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_2279 long chain acyl-CoA synthetase; AMP-dependent synthetase and ligase 983327 4895369 Rsph17029_0954 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001042837.1 981366 R 349101 CDS YP_001042838.1 126461724 4897539 984025..985947 1 NC_009049.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_2280 PAS sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 985947 4897539 Rsph17029_0955 Rhodobacter sphaeroides ATCC 17029 PAS/PAC sensor hybrid histidine kinase YP_001042838.1 984025 D 349101 CDS YP_001042839.1 126461725 4897936 985944..986651 1 NC_009049.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_2281 two-component trancriptional regulator, winged helix family; two component transcriptional regulator 986651 4897936 Rsph17029_0956 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001042839.1 985944 D 349101 CDS YP_001042840.1 126461726 4897151 complement(986662..987840) 1 NC_009049.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rsp:RSP_2282 chromate efflux pump, ChrA; chromate transporter 987840 4897151 Rsph17029_0957 Rhodobacter sphaeroides ATCC 17029 chromate transporter YP_001042840.1 986662 R 349101 CDS YP_001042841.1 126461727 4896485 988271..988891 1 NC_009049.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 988891 rpsD 4896485 rpsD Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S4 YP_001042841.1 988271 D 349101 CDS YP_001042842.1 126461728 4897041 989136..990221 1 NC_009049.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 990221 4897041 Rsph17029_0959 Rhodobacter sphaeroides ATCC 17029 histidinol-phosphate aminotransferase YP_001042842.1 989136 D 349101 CDS YP_001042843.1 126461729 4896968 990221..991156 1 NC_009049.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 991156 4896968 Rsph17029_0960 Rhodobacter sphaeroides ATCC 17029 cyclohexadienyl dehydrogenase YP_001042843.1 990221 D 349101 CDS YP_001042844.1 126461730 4895133 991162..992025 1 NC_009049.1 PFAM: Extensin family protein; KEGG: rsp:RSP_2285 conservd hypothetical protein; extensin family protein 992025 4895133 Rsph17029_0961 Rhodobacter sphaeroides ATCC 17029 extensin family protein YP_001042844.1 991162 D 349101 CDS YP_001042845.1 126461731 4895250 complement(992028..993023) 1 NC_009049.1 KEGG: rsp:RSP_2286 hypothetical protein; hypothetical protein 993023 4895250 Rsph17029_0962 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042845.1 992028 R 349101 CDS YP_001042846.1 126461732 4896283 993084..993632 1 NC_009049.1 PFAM: ChaC family protein; KEGG: rsp:RSP_2287 ChaC-like protein; ChaC family protein 993632 4896283 Rsph17029_0963 Rhodobacter sphaeroides ATCC 17029 ChaC family protein YP_001042846.1 993084 D 349101 CDS YP_001042847.1 126461733 4896565 993706..994881 1 NC_009049.1 KEGG: rsp:RSP_2288 hypothetical protein; hypothetical protein 994881 4896565 Rsph17029_0964 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042847.1 993706 D 349101 CDS YP_001042848.1 126461734 4895264 994885..996462 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_2289 flagellar motor protein; hypothetical protein 996462 4895264 Rsph17029_0965 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042848.1 994885 D 349101 CDS YP_001042849.1 126461735 4895525 complement(996893..997342) 1 NC_009049.1 hypothetical protein 997342 4895525 Rsph17029_0966 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042849.1 996893 R 349101 CDS YP_001042850.1 126461736 4895134 complement(997369..997716) 1 NC_009049.1 KEGG: rru:Rru_A0676 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 997716 4895134 Rsph17029_0967 Rhodobacter sphaeroides ATCC 17029 transposase IS116/IS110/IS902 YP_001042850.1 997369 R 349101 CDS YP_001042851.1 126461737 4897277 complement(998202..1000517) 1 NC_009049.1 KEGG: rsp:RSP_2293 chaperonin ClpA/B; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1000517 4897277 Rsph17029_0968 Rhodobacter sphaeroides ATCC 17029 ATP-dependent Clp protease ATP-binding protein ClpA YP_001042851.1 998202 R 349101 CDS YP_001042852.1 126461738 4897105 complement(1000684..1001451) 1 NC_009049.1 PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_2294 putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein; hydroxyacylglutathione hydrolase 1001451 4897105 Rsph17029_0969 Rhodobacter sphaeroides ATCC 17029 hydroxyacylglutathione hydrolase YP_001042852.1 1000684 R 349101 CDS YP_001042853.1 126461739 4897025 1001513..1002301 1 NC_009049.1 KEGG: rsp:RSP_2295 hypothetical protein; hypothetical protein 1002301 4897025 Rsph17029_0970 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042853.1 1001513 D 349101 CDS YP_001042854.1 126461740 4896960 1002604..1003164 1 NC_009049.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+-transporting two-sector ATPase, delta (OSCP) subunit; KEGG: rsp:RSP_2296 ATPase, delta (OSCP) subunit; ATP synthase F1 subunit delta 1003164 4896960 Rsph17029_0971 Rhodobacter sphaeroides ATCC 17029 ATP synthase F1 subunit delta YP_001042854.1 1002604 D 349101 CDS YP_001042855.1 126461741 4896512 1003165..1004703 1 NC_009049.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1004703 4896512 Rsph17029_0972 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit alpha YP_001042855.1 1003165 D 349101 CDS YP_001042856.1 126461742 4895592 1004726..1005595 1 NC_009049.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1005595 4895592 Rsph17029_0973 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit gamma YP_001042856.1 1004726 D 349101 CDS YP_001042857.1 126461743 4895212 1005613..1007040 1 NC_009049.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1007040 4895212 Rsph17029_0974 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit beta YP_001042857.1 1005613 D 349101 CDS YP_001042858.1 126461744 4896183 1007050..1007448 1 NC_009049.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 1007448 atpC 4896183 atpC Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit epsilon YP_001042858.1 1007050 D 349101 CDS YP_001042859.1 126461745 4896085 complement(1007881..1008900) 1 NC_009049.1 KEGG: rsp:RSP_2301 phosphoribosyl pyrophosphate synthetase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1008900 4896085 Rsph17029_0976 Rhodobacter sphaeroides ATCC 17029 ribose-phosphate pyrophosphokinase YP_001042859.1 1007881 R 349101 CDS YP_001042860.1 126461746 4896516 complement(1009032..1010057) 1 NC_009049.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsp:RSP_2302 putative low specificity L-threonine aldolase; threonine aldolase 1010057 4896516 Rsph17029_0977 Rhodobacter sphaeroides ATCC 17029 threonine aldolase YP_001042860.1 1009032 R 349101 CDS YP_001042861.1 126461747 4896957 complement(1010057..1010518) 1 NC_009049.1 PFAM: protein of unknown function UPF0153; KEGG: rsp:RSP_2303 hypothetical protein; hypothetical protein 1010518 4896957 Rsph17029_0978 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042861.1 1010057 R 349101 CDS YP_001042862.1 126461748 4896524 complement(1010558..1011478) 1 NC_009049.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: rsp:RSP_2304 riboflavin kinase / FAD synthetase = FMN adenylyltransferase, RibF; riboflavin biosynthesis protein RibF 1011478 4896524 Rsph17029_0979 Rhodobacter sphaeroides ATCC 17029 riboflavin biosynthesis protein RibF YP_001042862.1 1010558 R 349101 CDS YP_001042863.1 126461749 4897150 complement(1011506..1011949) 1 NC_009049.1 PFAM: MaoC domain protein dehydratase; KEGG: rsp:RSP_2305 MaoC family protein; dehydratase 1011949 4897150 Rsph17029_0980 Rhodobacter sphaeroides ATCC 17029 dehydratase YP_001042863.1 1011506 R 349101 CDS YP_001042864.1 126461750 4897280 complement(1012175..1013068) 1 NC_009049.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_2306 putative HAD superfamily protein; HAD family hydrolase 1013068 4897280 Rsph17029_0981 Rhodobacter sphaeroides ATCC 17029 HAD family hydrolase YP_001042864.1 1012175 R 349101 CDS YP_001042865.1 126461751 4895468 complement(1013219..1014136) 1 NC_009049.1 catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase 1014136 4895468 Rsph17029_0982 Rhodobacter sphaeroides ATCC 17029 putative manganese-dependent inorganic pyrophosphatase YP_001042865.1 1013219 R 349101 CDS YP_001042866.1 126461752 4895406 complement(1014525..1015580) 1 NC_009049.1 PFAM: GumN family protein; KEGG: rsp:RSP_2309 hypothetical protein; GumN family protein 1015580 4895406 Rsph17029_0983 Rhodobacter sphaeroides ATCC 17029 GumN family protein YP_001042866.1 1014525 R 349101 CDS YP_001042867.1 126461753 4895556 1015698..1015985 1 NC_009049.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1015985 groES 4895556 groES Rhodobacter sphaeroides ATCC 17029 co-chaperonin GroES YP_001042867.1 1015698 D 349101 CDS YP_001042868.1 126461754 4896901 1016081..1017724 1 NC_009049.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 1017724 groEL 4896901 groEL Rhodobacter sphaeroides ATCC 17029 chaperonin GroEL YP_001042868.1 1016081 D 349101 CDS YP_001042869.1 126461755 4895838 complement(1017993..1018604) 1 NC_009049.1 PFAM: protein of unknown function DUF1058; KEGG: rsp:RSP_2312 hypothetical protein; hypothetical protein 1018604 4895838 Rsph17029_0986 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042869.1 1017993 R 349101 CDS YP_001042870.1 126461756 4895653 1018702..1019688 1 NC_009049.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_2313 2-hydroxyacid dehydrogenase; glyoxylate reductase 1019688 4895653 Rsph17029_0987 Rhodobacter sphaeroides ATCC 17029 glyoxylate reductase YP_001042870.1 1018702 D 349101 CDS YP_001042871.1 126461757 4895180 1020009..1020827 1 NC_009049.1 PFAM: aldo/keto reductase; KEGG: rsp:RSP_2314 oxidoreductase, chromogranin/secretogranin; 2,5-didehydrogluconate reductase 1020827 4895180 Rsph17029_0988 Rhodobacter sphaeroides ATCC 17029 2,5-didehydrogluconate reductase YP_001042871.1 1020009 D 349101 CDS YP_001042872.1 126461758 4896958 1020917..1021222 1 NC_009049.1 KEGG: rsp:RSP_2315 hypothetical protein; hypothetical protein 1021222 4896958 Rsph17029_0989 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042872.1 1020917 D 349101 CDS YP_001042873.1 126461759 4897241 complement(1021396..1022637) 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2316 D-amino acid dehydrogenase; D-amino-acid dehydrogenase 1022637 4897241 Rsph17029_0990 Rhodobacter sphaeroides ATCC 17029 D-amino-acid dehydrogenase YP_001042873.1 1021396 R 349101 CDS YP_001042874.1 126461760 4897115 complement(1022684..1023829) 1 NC_009049.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rsp:RSP_2317 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1023829 4897115 Rsph17029_0991 Rhodobacter sphaeroides ATCC 17029 iron-containing alcohol dehydrogenase YP_001042874.1 1022684 R 349101 CDS YP_001042875.1 126461761 4895734 complement(1023826..1025214) 1 NC_009049.1 PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_2318 putative aldehyde dehydrogenase; aldehyde dehydrogenase 1025214 4895734 Rsph17029_0992 Rhodobacter sphaeroides ATCC 17029 aldehyde dehydrogenase YP_001042875.1 1023826 R 349101 CDS YP_001042876.1 126461762 4897319 complement(1025227..1026606) 1 NC_009049.1 PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_2319 glutamine synthetase class-I; glutamate--ammonia ligase 1026606 4897319 Rsph17029_0993 Rhodobacter sphaeroides ATCC 17029 glutamate--ammonia ligase YP_001042876.1 1025227 R 349101 CDS YP_001042877.1 126461763 4897275 complement(1026682..1027719) 1 NC_009049.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_2320 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter- DctP subunit 1027719 4897275 Rsph17029_0994 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001042877.1 1026682 R 349101 CDS YP_001042878.1 126461764 4896560 complement(1027776..1029101) 1 NC_009049.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_2321 putative TRAP-T family transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM 1029101 4896560 Rsph17029_0995 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001042878.1 1027776 R 349101 CDS YP_001042879.1 126461765 4897345 complement(1029101..1029607) 1 NC_009049.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_2322 TRAP-T family transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ 1029607 4897345 Rsph17029_0996 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001042879.1 1029101 R 349101 CDS YP_001042880.1 126461766 4895843 complement(1029612..1030376) 1 NC_009049.1 PFAM: N-formylglutamate amidohydrolase; KEGG: rsp:RSP_2323 hypothetical protein; N-formylglutamate amidohydrolase 1030376 4895843 Rsph17029_0997 Rhodobacter sphaeroides ATCC 17029 N-formylglutamate amidohydrolase YP_001042880.1 1029612 R 349101 CDS YP_001042881.1 126461767 4895565 1030551..1031417 1 NC_009049.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rsp:RSP_2324 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1031417 4895565 Rsph17029_0998 Rhodobacter sphaeroides ATCC 17029 RpiR family transcriptional regulator YP_001042881.1 1030551 D 349101 CDS YP_001042882.1 126461768 4897738 complement(1031597..1032736) 1 NC_009049.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: rsp:RSP_2325 RodA, rod cell shape determining protein; rod shape-determining protein RodA 1032736 4897738 Rsph17029_0999 Rhodobacter sphaeroides ATCC 17029 rod shape-determining protein RodA YP_001042882.1 1031597 R 349101 CDS YP_001042883.1 126461769 4896509 complement(1032744..1034690) 1 NC_009049.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: rsp:RSP_2326 cell division protein FtsI; peptidoglycan glycosyltransferase 1034690 4896509 Rsph17029_1000 Rhodobacter sphaeroides ATCC 17029 peptidoglycan glycosyltransferase YP_001042883.1 1032744 R 349101 CDS YP_001042884.1 126461770 4896302 complement(1034687..1035226) 1 NC_009049.1 KEGG: rsp:RSP_2327 putative rod shape-determining protein MreD; putative rod shape-determining protein MreD 1035226 4896302 Rsph17029_1001 Rhodobacter sphaeroides ATCC 17029 putative rod shape-determining protein MreD YP_001042884.1 1034687 R 349101 CDS YP_001042885.1 126461771 4895364 complement(1035219..1036121) 1 NC_009049.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1036121 4895364 Rsph17029_1002 Rhodobacter sphaeroides ATCC 17029 rod shape-determining protein MreC YP_001042885.1 1035219 R 349101 CDS YP_001042886.1 126461772 4897597 complement(1036155..1037192) 1 NC_009049.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1037192 4897597 Rsph17029_1003 Rhodobacter sphaeroides ATCC 17029 rod shape-determining protein MreB YP_001042886.1 1036155 R 349101 CDS YP_001042887.1 126461773 4896927 1037541..1038497 1 NC_009049.1 KEGG: rsp:RSP_6044 possible serine/alanine racemase VanTc3; putative serine/alanine racemase VanTc3 1038497 4896927 Rsph17029_1004 Rhodobacter sphaeroides ATCC 17029 putative serine/alanine racemase VanTc3 YP_001042887.1 1037541 D 349101 CDS YP_001042888.1 126461774 4896360 complement(1038646..1040235) 1 NC_009049.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1040235 4896360 Rsph17029_1005 Rhodobacter sphaeroides ATCC 17029 2-isopropylmalate synthase YP_001042888.1 1038646 R 349101 CDS YP_001042889.1 126461775 4895879 1040700..1041158 1 NC_009049.1 TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: rsp:RSP_2331 PpaZ, a novel pseudoazurin precursor (blue copper protein); pseudoazurin 1041158 4895879 Rsph17029_1006 Rhodobacter sphaeroides ATCC 17029 pseudoazurin YP_001042889.1 1040700 D 349101 CDS YP_001042890.1 126461776 4895672 complement(1041655..1043160) 1 NC_009049.1 PFAM: MORN repeat-containing protein; KEGG: rsp:RSP_2332 hypothetical protein; MORN repeat-containing protein 1043160 4895672 Rsph17029_1007 Rhodobacter sphaeroides ATCC 17029 MORN repeat-containing protein YP_001042890.1 1041655 R 349101 CDS YP_001042891.1 126461777 4896288 1043342..1045006 1 NC_009049.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1045006 nadE 4896288 nadE Rhodobacter sphaeroides ATCC 17029 NAD synthetase YP_001042891.1 1043342 D 349101 CDS YP_001042892.1 126461778 4895935 complement(1045112..1046056) 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_2334 carbohydrate kinase, PfkB; ribokinase-like domain-containing protein 1046056 4895935 Rsph17029_1009 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001042892.1 1045112 R 349101 CDS YP_001042893.1 126461779 4897192 1046203..1046796 1 NC_009049.1 PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: rsp:RSP_2335 trp repressor binding protein WrbA, putative; flavodoxin/nitric oxide synthase 1046796 4897192 Rsph17029_1010 Rhodobacter sphaeroides ATCC 17029 flavodoxin/nitric oxide synthase YP_001042893.1 1046203 D 349101 CDS YP_001042894.1 126461780 4898058 complement(1046821..1047120) 1 NC_009049.1 KEGG: rsp:RSP_6045 hypothetical protein; hypothetical protein 1047120 4898058 Rsph17029_1011 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042894.1 1046821 R 349101 CDS YP_001042895.1 126461781 4896860 1047192..1047923 1 NC_009049.1 PFAM: peptidase M48, Ste24p; KEGG: rsp:RSP_2336 hypothetical protein; peptidase M48, Ste24p 1047923 4896860 Rsph17029_1012 Rhodobacter sphaeroides ATCC 17029 peptidase M48, Ste24p YP_001042895.1 1047192 D 349101 CDS YP_001042896.1 126461782 4898032 1047998..1048249 1 NC_009049.1 KEGG: rsp:RSP_2337 hypothetical protein; hypothetical protein 1048249 4898032 Rsph17029_1013 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042896.1 1047998 D 349101 CDS YP_001042897.1 126461783 4897056 1048335..1048697 1 NC_009049.1 PFAM: PRC-barrel domain protein; KEGG: rsp:RSP_2338 hypothetical protein; PRC-barrel domain-containing protein 1048697 4897056 Rsph17029_1014 Rhodobacter sphaeroides ATCC 17029 PRC-barrel domain-containing protein YP_001042897.1 1048335 D 349101 CDS YP_001042898.1 126461784 4897455 complement(1048915..1050282) 1 NC_009049.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 1050282 rimO 4897455 rimO Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S12 methylthiotransferase YP_001042898.1 1048915 R 349101 CDS YP_001042899.1 126461785 4895557 complement(1050386..1051564) 1 NC_009049.1 PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_2341 hypothetical protein; hypothetical protein 1051564 4895557 Rsph17029_1016 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042899.1 1050386 R 349101 CDS YP_001042900.1 126461786 4895164 complement(1051593..1052096) 1 NC_009049.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1052096 4895164 Rsph17029_1017 Rhodobacter sphaeroides ATCC 17029 xanthine-guanine phosphoribosyltransferase YP_001042900.1 1051593 R 349101 CDS YP_001042901.1 126461787 4896857 complement(1052106..1052720) 1 NC_009049.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rsp:RSP_2343 putative threonine efflux protein, RhtB family; lysine exporter protein LysE/YggA 1052720 4896857 Rsph17029_1018 Rhodobacter sphaeroides ATCC 17029 lysine exporter protein LysE/YggA YP_001042901.1 1052106 R 349101 CDS YP_001042902.1 126461788 4895339 complement(1052722..1053546) 1 NC_009049.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1053546 4895339 Rsph17029_1019 Rhodobacter sphaeroides ATCC 17029 enoyl-ACP reductase YP_001042902.1 1052722 R 349101 CDS YP_001042903.1 126461789 4897518 1053689..1054291 1 NC_009049.1 KEGG: rsp:RSP_2345 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase 1054291 4897518 Rsph17029_1020 Rhodobacter sphaeroides ATCC 17029 pyridoxamine 5'-phosphate oxidase YP_001042903.1 1053689 D 349101 CDS YP_001042904.1 126461790 4895568 1054408..1054950 1 NC_009049.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_2346 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1054950 4895568 Rsph17029_1021 Rhodobacter sphaeroides ATCC 17029 cold-shock DNA-binding domain-containing protein YP_001042904.1 1054408 D 349101 CDS YP_001042905.1 126461791 4895446 1054911..1055426 1 NC_009049.1 PFAM: protein of unknown function DUF192; KEGG: rsp:RSP_2347 hypothetical protein; hypothetical protein 1055426 4895446 Rsph17029_1022 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042905.1 1054911 D 349101 CDS YP_001042906.1 126461792 4897804 1056047..1056883 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rsp:RSP_2362 transcriptional regulator, GntR family; UbiC transcription regulator-associated domain-containing protein 1056883 4897804 Rsph17029_1023 Rhodobacter sphaeroides ATCC 17029 UbiC transcription regulator-associated domain-containing protein YP_001042906.1 1056047 D 349101 CDS YP_001042907.1 126461793 4898024 1057077..1057841 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2363 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1057841 4898024 Rsph17029_1024 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001042907.1 1057077 D 349101 CDS YP_001042908.1 126461794 4895602 1057846..1058502 1 NC_009049.1 PFAM: class II aldolase/adducin family protein; KEGG: rsp:RSP_2364 L-fuculose phosphate aldolase (class II); L-fuculose phosphate aldolase 1058502 4895602 Rsph17029_1025 Rhodobacter sphaeroides ATCC 17029 L-fuculose phosphate aldolase YP_001042908.1 1057846 D 349101 CDS YP_001042909.1 126461795 4895343 1058568..1059530 1 NC_009049.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_2365 ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; periplasmic binding protein/LacI transcriptional regulator 1059530 4895343 Rsph17029_1026 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001042909.1 1058568 D 349101 CDS YP_001042910.1 126461796 4895558 1059716..1061224 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2366 ABC sugar (ribose) transporter, fused ATPase subunits; ABC transporter 1061224 4895558 Rsph17029_1027 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042910.1 1059716 D 349101 CDS YP_001042911.1 126461797 4895108 1061225..1062235 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2368 ABC sugar (ribose) transporter, inner membrane subunit; inner-membrane translocator 1062235 4895108 Rsph17029_1028 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001042911.1 1061225 D 349101 CDS YP_001042912.1 126461798 4895206 1062239..1063216 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2367 ABC sugar (ribose) transporter, inner membrane subunit; inner-membrane translocator 1063216 4895206 Rsph17029_1029 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001042912.1 1062239 D 349101 CDS YP_001042913.1 126461799 4895377 1063232..1064182 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_2370 putative sugar kinase; ribokinase-like domain-containing protein 1064182 4895377 Rsph17029_1030 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001042913.1 1063232 D 349101 CDS YP_001042914.1 126461800 4895487 1064193..1064939 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2371 3-oxoacyl-(acyl-carrier protein) reductase / short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1064939 4895487 Rsph17029_1031 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001042914.1 1064193 D 349101 CDS YP_001042915.1 126461801 4895539 1065193..1066611 1 NC_009049.1 PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_2372 aldehyde dehydrogenase (NAD-dependent); aldehyde dehydrogenase 1066611 4895539 Rsph17029_1032 Rhodobacter sphaeroides ATCC 17029 aldehyde dehydrogenase YP_001042915.1 1065193 D 349101 CDS YP_001042916.1 126461802 4895573 1066608..1067777 1 NC_009049.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rsp:RSP_2373 putative transporter, major facilitator superfamily (MFS); major facilitator superfamily transporter 1067777 4895573 Rsph17029_1033 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001042916.1 1066608 D 349101 CDS YP_001042917.1 126461803 4895751 1068010..1068534 1 NC_009049.1 KEGG: rsp:RSP_2374 hypothetical protein; hypothetical protein 1068534 4895751 Rsph17029_1034 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042917.1 1068010 D 349101 CDS YP_001042918.1 126461804 4895827 1068621..1070066 1 NC_009049.1 PFAM: protein of unknown function UPF0061; KEGG: rsp:RSP_2375 hypothetical protein; hypothetical protein 1070066 4895827 Rsph17029_1035 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042918.1 1068621 D 349101 CDS YP_001042919.1 126461805 4896142 1070111..1071301 1 NC_009049.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 1071301 4896142 Rsph17029_1036 Rhodobacter sphaeroides ATCC 17029 2-amino-3-ketobutyrate coenzyme A ligase YP_001042919.1 1070111 D 349101 CDS YP_001042920.1 126461806 4896461 1071301..1072326 1 NC_009049.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 1072326 tdh 4896461 tdh Rhodobacter sphaeroides ATCC 17029 L-threonine 3-dehydrogenase YP_001042920.1 1071301 D 349101 CDS YP_001042921.1 126461807 4896712 complement(1072518..1073840) 1 NC_009049.1 KEGG: rsp:RSP_2378 putative fatty acid beta hydroxylase (cytochrome P450); putative fatty acid beta hydroxylase (cytochrome P450) 1073840 4896712 Rsph17029_1038 Rhodobacter sphaeroides ATCC 17029 putative fatty acid beta hydroxylase (cytochrome P450) YP_001042921.1 1072518 R 349101 CDS YP_001042922.1 126461808 4896884 complement(1073951..1074205) 1 NC_009049.1 KEGG: rsp:RSP_2379 hypothetical protein; hypothetical protein 1074205 4896884 Rsph17029_1039 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042922.1 1073951 R 349101 CDS YP_001042923.1 126461809 4896950 complement(1074241..1076373) 1 NC_009049.1 PFAM: Catalase domain protein; KEGG: rsp:RSP_2380 catalase; catalase 1076373 4896950 Rsph17029_1040 Rhodobacter sphaeroides ATCC 17029 catalase YP_001042923.1 1074241 R 349101 CDS YP_001042924.1 126461810 4897351 complement(1076495..1077022) 1 NC_009049.1 KEGG: rsp:RSP_6048 hypothetical protein; hypothetical protein 1077022 4897351 Rsph17029_1041 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042924.1 1076495 R 349101 CDS YP_001042925.1 126461811 4897498 1077141..1077695 1 NC_009049.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1077695 4897498 Rsph17029_1042 Rhodobacter sphaeroides ATCC 17029 3-methyladenine DNA glycosylase YP_001042925.1 1077141 D 349101 CDS YP_001042926.1 126461812 4897903 1077768..1077929 1 NC_009049.1 hypothetical protein 1077929 4897903 Rsph17029_1043 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042926.1 1077768 D 349101 CDS YP_001042927.1 126461813 4895528 complement(1078119..1079228) 1 NC_009049.1 KEGG: rsp:RSP_2382 hypothetical protein; hypothetical protein 1079228 4895528 Rsph17029_1044 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042927.1 1078119 R 349101 CDS YP_001042928.1 126461814 4898012 complement(1079228..1079629) 1 NC_009049.1 PFAM: protein of unknown function DUF1469; KEGG: rsp:RSP_2383 putative integral membrane protein; hypothetical protein 1079629 4898012 Rsph17029_1045 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042928.1 1079228 R 349101 CDS YP_001042929.1 126461815 4896468 complement(1079616..1080440) 1 NC_009049.1 KEGG: rsp:RSP_6050 hypothetical protein; hypothetical protein 1080440 4896468 Rsph17029_1046 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042929.1 1079616 R 349101 CDS YP_001042930.1 126461816 4895966 1080580..1081140 1 NC_009049.1 KEGG: rsp:RSP_2384 hypothetical protein; hypothetical protein 1081140 4895966 Rsph17029_1047 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042930.1 1080580 D 349101 CDS YP_001042931.1 126461817 4897249 complement(1081220..1081582) 1 NC_009049.1 KEGG: rsp:RSP_2385 hypothetical protein; hypothetical protein 1081582 4897249 Rsph17029_1048 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042931.1 1081220 R 349101 CDS YP_001042932.1 126461818 4897669 1081984..1082364 1 NC_009049.1 PFAM: phosphate-starvation-inducible E; KEGG: rsp:RSP_6224 hypothetical protein; phosphate-starvation-inducible E 1082364 4897669 Rsph17029_1049 Rhodobacter sphaeroides ATCC 17029 phosphate-starvation-inducible E YP_001042932.1 1081984 D 349101 CDS YP_001042933.1 126461819 4897038 complement(1082367..1083461) 1 NC_009049.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 1083461 mtnA 4897038 mtnA Rhodobacter sphaeroides ATCC 17029 methylthioribose-1-phosphate isomerase YP_001042933.1 1082367 R 349101 CDS YP_001042934.1 126461820 4895334 complement(1083573..1084007) 1 NC_009049.1 PFAM: protein of unknown function DUF1178; KEGG: rsp:RSP_2387 hypothetical protein; hypothetical protein 1084007 4895334 Rsph17029_1051 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042934.1 1083573 R 349101 CDS YP_001042935.1 126461821 4897953 complement(1084079..1084579) 1 NC_009049.1 PFAM: NUDIX hydrolase; KEGG: rsp:RSP_2388 hypothetical protein; NUDIX hydrolase 1084579 4897953 Rsph17029_1052 Rhodobacter sphaeroides ATCC 17029 NUDIX hydrolase YP_001042935.1 1084079 R 349101 CDS YP_001042936.1 126461822 4898090 1084864..1085394 1 NC_009049.1 PFAM: glutathione peroxidase; KEGG: rsp:RSP_2389 putative glutathione peroxidase; glutathione peroxidase 1085394 4898090 Rsph17029_1053 Rhodobacter sphaeroides ATCC 17029 glutathione peroxidase YP_001042936.1 1084864 D 349101 CDS YP_001042937.1 126461823 4895117 1085423..1086532 1 NC_009049.1 PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_2390 putative acetoin utilization protein; histone deacetylase superfamily protein 1086532 4895117 Rsph17029_1054 Rhodobacter sphaeroides ATCC 17029 histone deacetylase superfamily protein YP_001042937.1 1085423 D 349101 CDS YP_001042938.1 126461824 4895813 1086529..1087083 1 NC_009049.1 TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: rsp:RSP_2391 2'-5' RNA ligase; 2'-5' RNA ligase 1087083 4895813 Rsph17029_1055 Rhodobacter sphaeroides ATCC 17029 2'-5' RNA ligase YP_001042938.1 1086529 D 349101 CDS YP_001042939.1 126461825 4896059 complement(1087094..1087651) 1 NC_009049.1 PFAM: NnrUfamily protein; KEGG: rsp:RSP_2392 putative membrane protein, similar to periplasmic nitrate reductase NnuR; NnrU family protein 1087651 4896059 Rsph17029_1056 Rhodobacter sphaeroides ATCC 17029 NnrU family protein YP_001042939.1 1087094 R 349101 CDS YP_001042940.1 126461826 4895067 complement(1087950..1089227) 1 NC_009049.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: rsp:RSP_2394 putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase); 3-deoxy-D-manno-octulosonic-acid transferase 1089227 4895067 Rsph17029_1057 Rhodobacter sphaeroides ATCC 17029 3-deoxy-D-manno-octulosonic-acid transferase YP_001042940.1 1087950 R 349101 CDS YP_001042941.1 126461827 4896048 1089337..1090380 1 NC_009049.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: rsp:RSP_2395 BccP, cytochrome c peroxidase; cytochrome-c peroxidase 1090380 4896048 Rsph17029_1058 Rhodobacter sphaeroides ATCC 17029 cytochrome-c peroxidase YP_001042941.1 1089337 D 349101 CDS YP_001042942.1 126461828 4895694 complement(1090455..1091456) 1 NC_009049.1 KEGG: rsp:RSP_2396 hypothetical protein; hypothetical protein 1091456 4895694 Rsph17029_1059 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042942.1 1090455 R 349101 CDS YP_001042943.1 126461829 4895738 complement(1091748..1092773) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2397 ABC putrescine transporter, periplasmic substrate-binding subunit; extracellular solute-binding protein 1092773 4895738 Rsph17029_1060 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001042943.1 1091748 R 349101 CDS YP_001042944.1 126461830 4895711 complement(1092801..1093601) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2398 ABC putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1093601 4895711 Rsph17029_1061 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042944.1 1092801 R 349101 CDS YP_001042945.1 126461831 4895078 complement(1093594..1094487) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2399 ABC putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1094487 4895078 Rsph17029_1062 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001042945.1 1093594 R 349101 CDS YP_001042946.1 126461832 4895746 complement(1094489..1095553) 1 NC_009049.1 KEGG: rsp:RSP_2400 ABC putrescine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1095553 4895746 Rsph17029_1063 Rhodobacter sphaeroides ATCC 17029 spermidine/putrescine ABC transporter ATPase YP_001042946.1 1094489 R 349101 CDS YP_001042947.1 126461833 4896522 complement(1095584..1097071) 1 NC_009049.1 PFAM: Amidase; KEGG: rsp:RSP_2401 putative 6-aminohexanoate-cyclic-dimer hydrolase; amidase 1097071 4896522 Rsph17029_1064 Rhodobacter sphaeroides ATCC 17029 amidase YP_001042947.1 1095584 R 349101 CDS YP_001042948.1 126461834 4895788 1097531..1099366 1 NC_009049.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_2402 putative TonB dependent vitamin B12 outer membrane receptor; TonB-dependent receptor 1099366 4895788 Rsph17029_1065 Rhodobacter sphaeroides ATCC 17029 TonB-dependent receptor YP_001042948.1 1097531 D 349101 CDS YP_001042949.1 126461835 4895747 1099353..1100213 1 NC_009049.1 PFAM: periplasmic binding protein; KEGG: rsp:RSP_2403 ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit; periplasmic binding protein 1100213 4895747 Rsph17029_1066 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein YP_001042949.1 1099353 D 349101 CDS YP_001042950.1 126461836 4897223 1100210..1101199 1 NC_009049.1 PFAM: transport system permease protein; KEGG: rsp:RSP_2404 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; transport system permease 1101199 4897223 Rsph17029_1067 Rhodobacter sphaeroides ATCC 17029 transport system permease YP_001042950.1 1100210 D 349101 CDS YP_001042951.1 126461837 4897620 1101196..1101948 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2405 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit; ABC transporter 1101948 4897620 Rsph17029_1068 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001042951.1 1101196 D 349101 CDS YP_001042952.1 126461838 4897259 1101945..1102604 1 NC_009049.1 PFAM: protein of unknown function DUF105; KEGG: rsp:RSP_2406 hypothetical protein; hypothetical protein 1102604 4897259 Rsph17029_1069 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042952.1 1101945 D 349101 CDS YP_001042953.1 126461839 4896826 complement(1102852..1104579) 1 NC_009049.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_2407 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 1104579 4896826 Rsph17029_1070 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor hybrid histidine kinase YP_001042953.1 1102852 R 349101 CDS YP_001042954.1 126461840 4896261 complement(1104629..1104874) 1 NC_009049.1 KEGG: rsp:RSP_2408 hypothetical protein; hypothetical protein 1104874 4896261 Rsph17029_1071 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042954.1 1104629 R 349101 CDS YP_001042955.1 126461841 4895888 1104948..1105997 1 NC_009049.1 KEGG: rsp:RSP_2409 putative pseudouridine synthase, Rlu; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1105997 4895888 Rsph17029_1072 Rhodobacter sphaeroides ATCC 17029 RluA family pseudouridine synthase YP_001042955.1 1104948 D 349101 CDS YP_001042956.1 126461842 4897060 1106158..1107054 1 NC_009049.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 1107054 4897060 Rsph17029_1073 Rhodobacter sphaeroides ATCC 17029 RNA polymerase factor sigma-32 YP_001042956.1 1106158 D 349101 CDS YP_001042957.1 126461843 4897315 complement(1107599..1108399) 1 NC_009049.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_2411 hypothetical protein; type 12 methyltransferase 1108399 4897315 Rsph17029_1074 Rhodobacter sphaeroides ATCC 17029 type 12 methyltransferase YP_001042957.1 1107599 R 349101 CDS YP_001042958.1 126461844 4897641 complement(1108484..1110304) 1 NC_009049.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: rsp:RSP_2412 oligoendopeptidase F; pepF/M3 family oligoendopeptidase 1110304 4897641 Rsph17029_1075 Rhodobacter sphaeroides ATCC 17029 pepF/M3 family oligoendopeptidase YP_001042958.1 1108484 R 349101 CDS YP_001042959.1 126461845 4897401 complement(1110476..1112077) 1 NC_009049.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 1112077 4897401 Rsph17029_1076 Rhodobacter sphaeroides ATCC 17029 ATP-dependent DNA ligase YP_001042959.1 1110476 R 349101 CDS YP_001042960.1 126461846 4896655 complement(1112074..1113225) 1 NC_009049.1 KEGG: rsp:RSP_2414 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor 1113225 4896655 Rsph17029_1077 Rhodobacter sphaeroides ATCC 17029 putative mRNA 3-end processing factor YP_001042960.1 1112074 R 349101 CDS YP_001042961.1 126461847 4896473 1113395..1114813 1 NC_009049.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rsp:RSP_2415 hypothetical protein; hypothetical protein 1114813 4896473 Rsph17029_1078 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042961.1 1113395 D 349101 CDS YP_001042962.1 126461848 4897088 1114821..1115771 1 NC_009049.1 PFAM: protein of unknown function DUF403; KEGG: rsp:RSP_2416 hypothetical protein; hypothetical protein 1115771 4897088 Rsph17029_1079 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042962.1 1114821 D 349101 CDS YP_001042963.1 126461849 4896953 1115768..1116577 1 NC_009049.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rsp:RSP_2417 hypothetical protein; transglutaminase domain-containing protein 1116577 4896953 Rsph17029_1080 Rhodobacter sphaeroides ATCC 17029 transglutaminase domain-containing protein YP_001042963.1 1115768 D 349101 CDS YP_001042964.1 126461850 4895784 1116609..1117334 1 NC_009049.1 PFAM: 20S proteasome, A and B subunits; KEGG: rsp:RSP_2420 putative proteasome-type protease; 20S proteasome, A and B subunits 1117334 4895784 Rsph17029_1081 Rhodobacter sphaeroides ATCC 17029 20S proteasome, A and B subunits YP_001042964.1 1116609 D 349101 CDS YP_001042965.1 126461851 4895772 complement(1117324..1118277) 1 NC_009049.1 PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_2418 putative esterase/lipase/thioesterase; alpha/beta hydrolase 1118277 4895772 Rsph17029_1082 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001042965.1 1117324 R 349101 CDS YP_001042966.1 126461852 4895074 complement(1118274..1118558) 1 NC_009049.1 PFAM: Sterol-binding domain protein; KEGG: rsp:RSP_2419 hypothetical protein; sterol-binding domain-containing protein 1118558 4895074 Rsph17029_1083 Rhodobacter sphaeroides ATCC 17029 sterol-binding domain-containing protein YP_001042966.1 1118274 R 349101 CDS YP_001042967.1 126461853 4897095 1118679..1119206 1 NC_009049.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_2421 hypothetical protein; hypothetical protein 1119206 4897095 Rsph17029_1084 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042967.1 1118679 D 349101 CDS YP_001042968.1 126461854 4897182 1119745..1122105 1 NC_009049.1 PFAM: helicase domain protein; KEGG: rsp:RSP_2422 putative ATP-dependent helicase, MgpS; helicase domain-containing protein 1122105 4897182 Rsph17029_1086 Rhodobacter sphaeroides ATCC 17029 helicase domain-containing protein YP_001042968.1 1119745 D 349101 CDS YP_001042969.1 126461855 4895086 1122111..1122407 1 NC_009049.1 PFAM: RNA-binding S4 domain protein; KEGG: rsp:RSP_2423 putative heat shock protein 15 (HSP15); RNA-binding S4 domain-containing protein 1122407 4895086 Rsph17029_1087 Rhodobacter sphaeroides ATCC 17029 RNA-binding S4 domain-containing protein YP_001042969.1 1122111 D 349101 CDS YP_001042970.1 126461856 4895087 1122462..1122800 1 NC_009049.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_2424 ferredoxin II; 4Fe-4S ferredoxin 1122800 4895087 Rsph17029_1088 Rhodobacter sphaeroides ATCC 17029 4Fe-4S ferredoxin YP_001042970.1 1122462 D 349101 CDS YP_001042971.1 126461857 4897102 1123080..1123589 1 NC_009049.1 PFAM: transcription factor CarD; KEGG: rsp:RSP_2425 putative CarD-like transcriptional regulator; CarD family transcriptional regulator 1123589 4897102 Rsph17029_1089 Rhodobacter sphaeroides ATCC 17029 CarD family transcriptional regulator YP_001042971.1 1123080 D 349101 CDS YP_001042972.1 126461858 4897322 complement(1123778..1124527) 1 NC_009049.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rsp:RSP_2427 putative cobalamin (5'-phosphate) synthase; cobalamin 5'-phosphate synthase 1124527 4897322 Rsph17029_1090 Rhodobacter sphaeroides ATCC 17029 cobalamin 5'-phosphate synthase YP_001042972.1 1123778 R 349101 CDS YP_001042973.1 126461859 4896573 1124609..1125625 1 NC_009049.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1125625 cobT 4896573 cobT Rhodobacter sphaeroides ATCC 17029 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001042973.1 1124609 D 349101 CDS YP_001042974.1 126461860 4897581 complement(1125681..1127609) 1 NC_009049.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rsp:RSP_2429 glutathione-regulated potassium-efflux system protein, KefB; sodium/hydrogen exchanger 1127609 4897581 Rsph17029_1092 Rhodobacter sphaeroides ATCC 17029 sodium/hydrogen exchanger YP_001042974.1 1125681 R 349101 CDS YP_001042975.1 126461861 4897543 complement(1127724..1130600) 1 NC_009049.1 KEGG: rsp:RSP_6052 hypothetical protein; hypothetical protein 1130600 4897543 Rsph17029_1093 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042975.1 1127724 R 349101 CDS YP_001042976.1 126461862 4895088 1130764..1131456 1 NC_009049.1 PFAM: protein of unknown function DUF541; KEGG: rsp:RSP_2430 hypothetical protein; hypothetical protein 1131456 4895088 Rsph17029_1094 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042976.1 1130764 D 349101 CDS YP_001042977.1 126461863 4895095 complement(1131502..1132794) 1 NC_009049.1 KEGG: rsp:RSP_2431 putative O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 1132794 4895095 Rsph17029_1095 Rhodobacter sphaeroides ATCC 17029 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001042977.1 1131502 R 349101 CDS YP_001042978.1 126461864 4895102 complement(1133040..1133387) 1 NC_009049.1 KEGG: rsp:RSP_2432 hypothetical protein; hypothetical protein 1133387 4895102 Rsph17029_1096 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042978.1 1133040 R 349101 CDS YP_001042979.1 126461865 4897064 complement(1133384..1133773) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_2433 chemotaxis response regulator, CheY2; response regulator receiver protein 1133773 4897064 Rsph17029_1097 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042979.1 1133384 R 349101 CDS YP_001042980.1 126461866 4895106 complement(1133748..1134665) 1 NC_009049.1 PFAM: MCP methyltransferase, CheR-type; KEGG: rsp:RSP_2434 putative MCP methyltransferase, CheR1; protein-glutamate O-methyltransferase 1134665 4895106 Rsph17029_1098 Rhodobacter sphaeroides ATCC 17029 protein-glutamate O-methyltransferase YP_001042980.1 1133748 R 349101 CDS YP_001042981.1 126461867 4895107 complement(1134662..1135120) 1 NC_009049.1 PFAM: CheW domain protein; KEGG: rsp:RSP_2435 putative chemotaxis scaffold protein, CheW1; putative CheW protein 1135120 4895107 Rsph17029_1099 Rhodobacter sphaeroides ATCC 17029 putative CheW protein YP_001042981.1 1134662 R 349101 CDS YP_001042982.1 126461868 4895109 complement(1135122..1137182) 1 NC_009049.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rsp:RSP_2436 chemotaxis histidine protein kinase, CheA1; CheA signal transduction histidine kinase 1137182 4895109 Rsph17029_1100 Rhodobacter sphaeroides ATCC 17029 CheA signal transduction histidine kinase YP_001042982.1 1135122 R 349101 CDS YP_001042983.1 126461869 4895115 complement(1137190..1137558) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_2437 chemotaxis response regulator, CheY1; response regulator receiver protein 1137558 4895115 Rsph17029_1101 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042983.1 1137190 R 349101 CDS YP_001042984.1 126461870 4895121 complement(1137549..1137833) 1 NC_009049.1 KEGG: rsp:RSP_2438 putative CheX protein; putative CheX protein 1137833 4895121 Rsph17029_1102 Rhodobacter sphaeroides ATCC 17029 putative CheX protein YP_001042984.1 1137549 R 349101 CDS YP_001042985.1 126461871 4895120 complement(1137830..1138429) 1 NC_009049.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 1138429 4895120 Rsph17029_1103 Rhodobacter sphaeroides ATCC 17029 chemoreceptor glutamine deamidase CheD YP_001042985.1 1137830 R 349101 CDS YP_001042986.1 126461872 4895119 complement(1138487..1140865) 1 NC_009049.1 PFAM: chemotaxis sensory transducer; KEGG: rsp:RSP_2440 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1140865 4895119 Rsph17029_1104 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001042986.1 1138487 R 349101 CDS YP_001042987.1 126461873 4895135 complement(1140972..1142759) 1 NC_009049.1 KEGG: rsp:RSP_2441 putative transducer like protein; putative transducer like protein 1142759 4895135 Rsph17029_1105 Rhodobacter sphaeroides ATCC 17029 putative transducer like protein YP_001042987.1 1140972 R 349101 CDS YP_001042988.1 126461874 4895129 complement(1142863..1144545) 1 NC_009049.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_2442 methyl accepting chemotaxis protein, McpB; methyl-accepting chemotaxis sensory transducer 1144545 4895129 Rsph17029_1106 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001042988.1 1142863 R 349101 CDS YP_001042989.1 126461875 4895131 complement(1144634..1145002) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_2443 putative chemotaxis response regulator, CheY5; response regulator receiver protein 1145002 4895131 Rsph17029_1107 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001042989.1 1144634 R 349101 CDS YP_001042990.1 126461876 4895126 complement(1144999..1145382) 1 NC_009049.1 KEGG: rsp:RSP_2444 hypothetical protein; hypothetical protein 1145382 4895126 Rsph17029_1108 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001042990.1 1144999 R 349101 CDS YP_001042991.1 126461877 4895151 1145466..1147613 1 NC_009049.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rsp:RSP_2445 putative alpha amylase; alpha amylase 1147613 4895151 Rsph17029_1109 Rhodobacter sphaeroides ATCC 17029 alpha amylase YP_001042991.1 1145466 D 349101 CDS YP_001042992.1 126461878 4895155 1147610..1150918 1 NC_009049.1 KEGG: rsp:RSP_2446 putative trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; trehalose synthase 1150918 4895155 Rsph17029_1110 Rhodobacter sphaeroides ATCC 17029 trehalose synthase YP_001042992.1 1147610 D 349101 CDS YP_001042993.1 126461879 4895154 1150915..1153101 1 NC_009049.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 1153101 4895154 Rsph17029_1111 Rhodobacter sphaeroides ATCC 17029 glycogen branching protein YP_001042993.1 1150915 D 349101 CDS YP_001042994.1 126461880 4895153 1153098..1155164 1 NC_009049.1 KEGG: rsp:RSP_2449 putative glycosyl hydrolase; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 1155164 4895153 Rsph17029_1112 Rhodobacter sphaeroides ATCC 17029 glycogen debranching protein GlgX YP_001042994.1 1153098 D 349101 CDS YP_001042995.1 126461881 4895159 1155161..1156939 1 NC_009049.1 KEGG: rsp:RSP_2450 putative alpha-amylase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 1156939 4895159 Rsph17029_1113 Rhodobacter sphaeroides ATCC 17029 malto-oligosyltrehalose trehalohydrolase YP_001042995.1 1155161 D 349101 CDS YP_001042996.1 126461882 4895160 1156936..1158753 1 NC_009049.1 KEGG: rsp:RSP_2451 putative 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase 1158753 4895160 Rsph17029_1114 Rhodobacter sphaeroides ATCC 17029 4-alpha-glucanotransferase YP_001042996.1 1156936 D 349101 CDS YP_001042997.1 126461883 4895157 1158750..1161365 1 NC_009049.1 KEGG: rsp:RSP_2452 alpha amylase, catalytic domain/subdomain; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; maltooligosyl trehalose synthase 1161365 4895157 Rsph17029_1115 Rhodobacter sphaeroides ATCC 17029 maltooligosyl trehalose synthase YP_001042997.1 1158750 D 349101 CDS YP_001042998.1 126461884 4895165 complement(1161424..1162089) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2453 putative oxidoreductase (NAD/NADP dependent); short-chain dehydrogenase/reductase SDR 1162089 4895165 Rsph17029_1116 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001042998.1 1161424 R 349101 CDS YP_001042999.1 126461885 4895176 complement(1162210..1163673) 1 NC_009049.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1163673 4895176 Rsph17029_1117 Rhodobacter sphaeroides ATCC 17029 amidophosphoribosyltransferase YP_001042999.1 1162210 R 349101 CDS YP_001043000.1 126461886 4895175 complement(1163758..1164372) 1 NC_009049.1 PFAM: Colicin V production protein; KEGG: rsp:RSP_2455 putative colicin V production protein, DedE; colicin V production protein 1164372 4895175 Rsph17029_1118 Rhodobacter sphaeroides ATCC 17029 colicin V production protein YP_001043000.1 1163758 R 349101 CDS YP_001043001.1 126461887 4895174 complement(1164391..1165749) 1 NC_009049.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1165749 4895174 Rsph17029_1119 Rhodobacter sphaeroides ATCC 17029 DNA repair protein RadA YP_001043001.1 1164391 R 349101 CDS YP_001043002.1 126461888 4895170 complement(1165922..1166347) 1 NC_009049.1 PFAM: Paraquat-inducible protein A; KEGG: rsp:RSP_2457 hypothetical protein; paraquat-inducible protein A 1166347 4895170 Rsph17029_1120 Rhodobacter sphaeroides ATCC 17029 paraquat-inducible protein A YP_001043002.1 1165922 R 349101 CDS YP_001043003.1 126461889 4895203 complement(1166348..1167094) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2458 ABC transporter, ATPase subunit; ABC transporter 1167094 4895203 Rsph17029_1121 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043003.1 1166348 R 349101 CDS YP_001043004.1 126461890 4895200 complement(1167091..1167873) 1 NC_009049.1 PFAM: protein of unknown function DUF140; KEGG: rsp:RSP_2459 ABC transporter, inner membrane subunit; hypothetical protein 1167873 4895200 Rsph17029_1122 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043004.1 1167091 R 349101 CDS YP_001043005.1 126461891 4895179 complement(1167870..1168919) 1 NC_009049.1 KEGG: rsp:RSP_2460 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 1168919 4895179 Rsph17029_1123 Rhodobacter sphaeroides ATCC 17029 alanine racemase YP_001043005.1 1167870 R 349101 CDS YP_001043006.1 126461892 4895215 1169148..1169885 1 NC_009049.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2461 3-oxoacyl-(acyl-carrier protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1169885 4895215 Rsph17029_1124 Rhodobacter sphaeroides ATCC 17029 3-oxoacyl-(acyl-carrier-protein) reductase YP_001043006.1 1169148 D 349101 CDS YP_001043007.1 126461893 4895235 1170064..1170297 1 NC_009049.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1170297 acpP 4895235 acpP Rhodobacter sphaeroides ATCC 17029 acyl carrier protein YP_001043007.1 1170064 D 349101 CDS YP_001043008.1 126461894 4895245 1170794..1172056 1 NC_009049.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1172056 4895245 Rsph17029_1126 Rhodobacter sphaeroides ATCC 17029 3-oxoacyl-(acyl carrier protein) synthase II YP_001043008.1 1170794 D 349101 CDS YP_001043009.1 126461895 4895303 1172056..1173234 1 NC_009049.1 PFAM: aminodeoxychorismate lyase; KEGG: rsp:RSP_2465 hypothetical protein; aminodeoxychorismate lyase 1173234 4895303 Rsph17029_1127 Rhodobacter sphaeroides ATCC 17029 aminodeoxychorismate lyase YP_001043009.1 1172056 D 349101 CDS YP_001043010.1 126461896 4895299 1173306..1173749 1 NC_009049.1 KEGG: rsp:RSP_2466 hypothetical protein; hypothetical protein 1173749 4895299 Rsph17029_1128 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043010.1 1173306 D 349101 CDS YP_001043011.1 126461897 4895292 1173796..1175040 1 NC_009049.1 PFAM: protein of unknown function DUF264; KEGG: rsp:RSP_2467 putative large terminase; hypothetical protein 1175040 4895292 Rsph17029_1129 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043011.1 1173796 D 349101 CDS YP_001043012.1 126461898 4895275 1175113..1176285 1 NC_009049.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: rsp:RSP_2468 putative portal protein; HK97 family phage portal protein 1176285 4895275 Rsph17029_1130 Rhodobacter sphaeroides ATCC 17029 HK97 family phage portal protein YP_001043012.1 1175113 D 349101 CDS YP_001043013.1 126461899 4895359 1176287..1176520 1 NC_009049.1 KEGG: rsp:RSP_2469 hypothetical protein; hypothetical protein 1176520 4895359 Rsph17029_1131 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043013.1 1176287 D 349101 CDS YP_001043014.1 126461900 4895335 1176525..1177088 1 NC_009049.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: rsp:RSP_2470 putative prohead protease; HK97 family phage prohead protease 1177088 4895335 Rsph17029_1132 Rhodobacter sphaeroides ATCC 17029 HK97 family phage prohead protease YP_001043014.1 1176525 D 349101 CDS YP_001043015.1 126461901 4895324 1177187..1178350 1 NC_009049.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: rsp:RSP_2471 predicted phage phi-C31 GP36 major capsid-like protein; HK97 family phage major capsid protein 1178350 4895324 Rsph17029_1133 Rhodobacter sphaeroides ATCC 17029 HK97 family phage major capsid protein YP_001043015.1 1177187 D 349101 CDS YP_001043016.1 126461902 4895381 1178445..1179044 1 NC_009049.1 KEGG: rsp:RSP_2472 hypothetical protein; hypothetical protein 1179044 4895381 Rsph17029_1134 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043016.1 1178445 D 349101 CDS YP_001043017.1 126461903 4895367 1179044..1179379 1 NC_009049.1 TIGRFAM: phage head-tail adaptor, putative; KEGG: rsp:RSP_6053 putative phage tail-head adaptor; phage head-tail adaptor 1179379 4895367 Rsph17029_1135 Rhodobacter sphaeroides ATCC 17029 phage head-tail adaptor YP_001043017.1 1179044 D 349101 CDS YP_001043018.1 126461904 4895356 1179376..1179774 1 NC_009049.1 KEGG: rsp:RSP_6054 hypothetical protein; hypothetical protein 1179774 4895356 Rsph17029_1136 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043018.1 1179376 D 349101 CDS YP_001043019.1 126461905 4895396 1179812..1180225 1 NC_009049.1 TIGRFAM: phage major tail protein, TP901-1 family; KEGG: rsp:RSP_2473 hypothetical protein; TP901-1 family phage major tail protein 1180225 4895396 Rsph17029_1137 Rhodobacter sphaeroides ATCC 17029 TP901-1 family phage major tail protein YP_001043019.1 1179812 D 349101 CDS YP_001043020.1 126461906 4895401 1180225..1180542 1 NC_009049.1 KEGG: rsp:RSP_2474 hypothetical protein; hypothetical protein 1180542 4895401 Rsph17029_1138 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043020.1 1180225 D 349101 CDS YP_001043021.1 126461907 4895398 1180544..1180744 1 NC_009049.1 KEGG: rsp:RSP_2474 hypothetical protein; hypothetical protein 1180744 4895398 Rsph17029_1139 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043021.1 1180544 D 349101 CDS YP_001043022.1 126461908 4895384 1180737..1181387 1 NC_009049.1 KEGG: rsp:RSP_2475 putative phage tail minor protein; putative phage tail minor protein 1181387 4895384 Rsph17029_1140 Rhodobacter sphaeroides ATCC 17029 putative phage tail minor protein YP_001043022.1 1180737 D 349101 CDS YP_001043023.1 126461909 4895426 1181397..1182029 1 NC_009049.1 KEGG: rsp:RSP_2476 hypothetical protein; hypothetical protein 1182029 4895426 Rsph17029_1141 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043023.1 1181397 D 349101 CDS YP_001043024.1 126461910 4895450 1182029..1182913 1 NC_009049.1 KEGG: rsp:RSP_2477 hypothetical protein; hypothetical protein 1182913 4895450 Rsph17029_1142 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043024.1 1182029 D 349101 CDS YP_001043025.1 126461911 4895447 1182910..1183350 1 NC_009049.1 TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family; KEGG: rsp:RSP_2478 hypothetical protein; NlpC/P60 family phage cell wall peptidase 1183350 4895447 Rsph17029_1143 Rhodobacter sphaeroides ATCC 17029 NlpC/P60 family phage cell wall peptidase YP_001043025.1 1182910 D 349101 CDS YP_001043026.1 126461912 4895429 1183350..1187240 1 NC_009049.1 KEGG: rsp:RSP_2479 putative phage host specificity protein; putative phage host specificity protein 1187240 4895429 Rsph17029_1144 Rhodobacter sphaeroides ATCC 17029 putative phage host specificity protein YP_001043026.1 1183350 D 349101 CDS YP_001043027.1 126461913 4895474 1187244..1187657 1 NC_009049.1 KEGG: rsp:RSP_2480 hypothetical protein; hypothetical protein 1187657 4895474 Rsph17029_1145 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043027.1 1187244 D 349101 CDS YP_001043028.1 126461914 4895476 1187650..1188456 1 NC_009049.1 KEGG: rsp:RSP_2481 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 1188456 4895476 Rsph17029_1146 Rhodobacter sphaeroides ATCC 17029 serine O-acetyltransferase YP_001043028.1 1187650 D 349101 CDS YP_001043029.1 126461915 4895466 complement(1188556..1189884) 1 NC_009049.1 KEGG: rsp:RSP_4050 dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 1189884 4895466 Rsph17029_1147 Rhodobacter sphaeroides ATCC 17029 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001043029.1 1188556 R 349101 CDS YP_001043030.1 126461916 4895465 complement(1189895..1191286) 1 NC_009049.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1191286 4895465 Rsph17029_1148 Rhodobacter sphaeroides ATCC 17029 pyruvate dehydrogenase subunit beta YP_001043030.1 1189895 R 349101 CDS YP_001043031.1 126461917 4895491 complement(1191300..1192289) 1 NC_009049.1 PFAM: dehydrogenase, E1 component; KEGG: rsp:RSP_4047 pyruvate dehydrogenase E1 component, alpha subunit; pyruvate dehydrogenase (acetyl-transferring) 1192289 4895491 Rsph17029_1149 Rhodobacter sphaeroides ATCC 17029 pyruvate dehydrogenase (acetyl-transferring) YP_001043031.1 1191300 R 349101 CDS YP_001043032.1 126461918 4895493 complement(1192513..1192815) 1 NC_009049.1 PFAM: Septum formation initiator; KEGG: rsp:RSP_4046 hypothetical protein; septum formation initiator 1192815 4895493 Rsph17029_1150 Rhodobacter sphaeroides ATCC 17029 septum formation initiator YP_001043032.1 1192513 R 349101 CDS YP_001043033.1 126461919 4895485 complement(1193100..1194029) 1 NC_009049.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 1194029 4895485 Rsph17029_1151 Rhodobacter sphaeroides ATCC 17029 fructose-bisphosphate aldolase YP_001043033.1 1193100 R 349101 CDS YP_001043034.1 126461920 4895518 complement(1194131..1195324) 1 NC_009049.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1195324 pgk 4895518 pgk Rhodobacter sphaeroides ATCC 17029 phosphoglycerate kinase YP_001043034.1 1194131 R 349101 CDS YP_001043035.1 126461921 4895514 1195473..1195982 1 NC_009049.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rsp:RSP_4043 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 1195982 4895514 Rsph17029_1153 Rhodobacter sphaeroides ATCC 17029 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001043035.1 1195473 D 349101 CDS YP_001043036.1 126461922 4895500 1195972..1196565 1 NC_009049.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rsp:RSP_4042 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1196565 4895500 Rsph17029_1154 Rhodobacter sphaeroides ATCC 17029 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001043036.1 1195972 D 349101 CDS YP_001043037.1 126461923 4895524 complement(1196805..1198055) 1 NC_009049.1 KEGG: rsp:RSP_4041 tyrosyl-tRNA synthetase, class Ib; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; tyrosyl-tRNA synthetase 1198055 4895524 Rsph17029_1155 Rhodobacter sphaeroides ATCC 17029 tyrosyl-tRNA synthetase YP_001043037.1 1196805 R 349101 CDS YP_001043038.1 126461924 4895580 1198131..1199246 1 NC_009049.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1199246 anmK 4895580 anmK Rhodobacter sphaeroides ATCC 17029 anhydro-N-acetylmuramic acid kinase YP_001043038.1 1198131 D 349101 CDS YP_001043039.1 126461925 4895571 complement(1199284..1199706) 1 NC_009049.1 PFAM: protein of unknown function DUF985; KEGG: rsp:RSP_2490 hypothetical protein; hypothetical protein 1199706 4895571 Rsph17029_1157 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043039.1 1199284 R 349101 CDS YP_001043040.1 126461926 4895595 1199869..1200105 1 NC_009049.1 KEGG: rsp:RSP_6057 hypothetical protein; hypothetical protein 1200105 4895595 Rsph17029_1158 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043040.1 1199869 D 349101 CDS YP_001043041.1 126461927 4895585 complement(1200176..1201453) 1 NC_009049.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1201453 eno 4895585 eno Rhodobacter sphaeroides ATCC 17029 phosphopyruvate hydratase YP_001043041.1 1200176 R 349101 CDS YP_001043042.1 126461928 4895596 complement(1201488..1202372) 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_2492 possible transporter, RhaT family, DMT superfamily; hypothetical protein 1202372 4895596 Rsph17029_1160 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043042.1 1201488 R 349101 CDS YP_001043043.1 126461929 4895584 complement(1202437..1202850) 1 NC_009049.1 PFAM: ferric-uptake regulator; KEGG: rsp:RSP_2494 ferric-uptake regulator; ferric uptake regulator family protein 1202850 4895584 Rsph17029_1161 Rhodobacter sphaeroides ATCC 17029 ferric uptake regulator family protein YP_001043043.1 1202437 R 349101 CDS YP_001043044.1 126461930 4895612 1203431..1207087 1 NC_009049.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1207087 4895612 Rsph17029_1162 Rhodobacter sphaeroides ATCC 17029 ribonucleotide-diphosphate reductase subunit alpha YP_001043044.1 1203431 D 349101 CDS YP_001043045.1 126461931 4895606 complement(1207467..1208357) 1 NC_009049.1 PFAM: Quinolinate phosphoribosyl transferase; KEGG: rsp:RSP_2501 hypothetical protein; quinolinate phosphoribosyl transferase 1208357 4895606 Rsph17029_1163 Rhodobacter sphaeroides ATCC 17029 quinolinate phosphoribosyl transferase YP_001043045.1 1207467 R 349101 CDS YP_001043046.1 126461932 4895603 complement(1208666..1210477) 1 NC_009049.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1210477 4895603 Rsph17029_1164 Rhodobacter sphaeroides ATCC 17029 glucosamine--fructose-6-phosphate aminotransferase YP_001043046.1 1208666 R 349101 CDS YP_001043047.1 126461933 4895600 complement(1210477..1211841) 1 NC_009049.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1211841 glmU 4895600 glmU Rhodobacter sphaeroides ATCC 17029 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001043047.1 1210477 R 349101 CDS YP_001043048.1 126461934 4895597 1211942..1212631 1 NC_009049.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_2504 phosphoglycolate phosphatase; HAD family hydrolase 1212631 4895597 Rsph17029_1166 Rhodobacter sphaeroides ATCC 17029 HAD family hydrolase YP_001043048.1 1211942 D 349101 CDS YP_001043049.1 126461935 4895621 complement(1212663..1213115) 1 NC_009049.1 PFAM: CreA family protein; KEGG: rsp:RSP_2505 possible CreA protein; CreA family protein 1213115 4895621 Rsph17029_1167 Rhodobacter sphaeroides ATCC 17029 CreA family protein YP_001043049.1 1212663 R 349101 CDS YP_001043050.1 126461936 4895617 1213247..1214404 1 NC_009049.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_2506 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1214404 4895617 Rsph17029_1168 Rhodobacter sphaeroides ATCC 17029 acyl-CoA dehydrogenase domain-containing protein YP_001043050.1 1213247 D 349101 CDS YP_001043051.1 126461937 4895616 complement(1214495..1215100) 1 NC_009049.1 PFAM: OmpW family protein; KEGG: rsp:RSP_2507 outer membrane protein; OmpW family protein 1215100 4895616 Rsph17029_1169 Rhodobacter sphaeroides ATCC 17029 OmpW family protein YP_001043051.1 1214495 R 349101 CDS YP_001043052.1 126461938 4895647 1215172..1216848 1 NC_009049.1 PFAM: carboxyl transferase; KEGG: rsp:RSP_2508 methylcrotonyl-CoA carboxylase beta chain; propionyl-CoA carboxylase 1216848 4895647 Rsph17029_1170 Rhodobacter sphaeroides ATCC 17029 propionyl-CoA carboxylase YP_001043052.1 1215172 D 349101 CDS YP_001043053.1 126461939 4895652 1216944..1218884 1 NC_009049.1 PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rsp:RSP_2509 methylcrotonyl-CoA carboxylase alpha chain; carbamoyl-phosphate synthase subunit L 1218884 4895652 Rsph17029_1171 Rhodobacter sphaeroides ATCC 17029 carbamoyl-phosphate synthase subunit L YP_001043053.1 1216944 D 349101 CDS YP_001043054.1 126461940 4895680 1218877..1219761 1 NC_009049.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 1219761 4895680 Rsph17029_1172 Rhodobacter sphaeroides ATCC 17029 hydroxymethylglutaryl-CoA lyase YP_001043054.1 1218877 D 349101 CDS YP_001043055.1 126461941 4895671 1219774..1220562 1 NC_009049.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1220562 4895671 Rsph17029_1173 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase YP_001043055.1 1219774 D 349101 CDS YP_001043056.1 126461942 4895684 1220783..1221148 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1221148 4895684 Rsph17029_1174 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit A YP_001043056.1 1220783 D 349101 CDS YP_001043057.1 126461943 4895709 1221139..1221669 1 NC_009049.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1221669 4895709 Rsph17029_1175 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit B YP_001043057.1 1221139 D 349101 CDS YP_001043058.1 126461944 4895712 1221680..1222282 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1222282 4895712 Rsph17029_1176 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit C YP_001043058.1 1221680 D 349101 CDS YP_001043059.1 126461945 4895708 1222293..1223501 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1223501 4895708 Rsph17029_1177 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit D YP_001043059.1 1222293 D 349101 CDS YP_001043060.1 126461946 4895692 1223501..1224412 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1224412 4895692 Rsph17029_1178 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit E YP_001043060.1 1223501 D 349101 CDS YP_001043061.1 126461947 4895719 1224412..1224624 1 NC_009049.1 KEGG: rsp:RSP_2517 hypothetical protein; hypothetical protein 1224624 4895719 Rsph17029_1179 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043061.1 1224412 D 349101 CDS YP_001043062.1 126461948 4895725 1224635..1225930 1 NC_009049.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1225930 4895725 Rsph17029_1180 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase I subunit F YP_001043062.1 1224635 D 349101 CDS YP_001043063.1 126461949 4895718 1225935..1226294 1 NC_009049.1 KEGG: rsp:RSP_2519 hypothetical protein; hypothetical protein 1226294 4895718 Rsph17029_1181 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043063.1 1225935 D 349101 CDS YP_001043064.1 126461950 4895731 1226397..1228418 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1228418 4895731 Rsph17029_1182 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit G YP_001043064.1 1226397 D 349101 CDS YP_001043065.1 126461951 4895771 1228422..1228832 1 NC_009049.1 KEGG: rsp:RSP_2520 hypothetical protein; hypothetical protein 1228832 4895771 Rsph17029_1183 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043065.1 1228422 D 349101 CDS YP_001043066.1 126461952 4895770 1228872..1229897 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1229897 4895770 Rsph17029_1184 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit H YP_001043066.1 1228872 D 349101 CDS YP_001043067.1 126461953 4895769 1229899..1230402 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1230402 4895769 Rsph17029_1185 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit I YP_001043067.1 1229899 D 349101 CDS YP_001043068.1 126461954 4895781 1230399..1230809 1 NC_009049.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_2524 possible carboxymuconolactone decarboxylase family protein; carboxymuconolactone decarboxylase 1230809 4895781 Rsph17029_1186 Rhodobacter sphaeroides ATCC 17029 carboxymuconolactone decarboxylase YP_001043068.1 1230399 D 349101 CDS YP_001043069.1 126461955 4895780 1230806..1231420 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1231420 4895780 Rsph17029_1187 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit J YP_001043069.1 1230806 D 349101 CDS YP_001043070.1 126461956 4895778 1231580..1231885 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1231885 4895778 Rsph17029_1188 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit K YP_001043070.1 1231580 D 349101 CDS YP_001043071.1 126461957 4895774 1231891..1234053 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1234053 4895774 Rsph17029_1189 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit L YP_001043071.1 1231891 D 349101 CDS YP_001043072.1 126461958 4895798 1234053..1235594 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1235594 4895798 Rsph17029_1190 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit M YP_001043072.1 1234053 D 349101 CDS YP_001043073.1 126461959 4895794 1235605..1237041 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1237041 4895794 Rsph17029_1191 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit N YP_001043073.1 1235605 D 349101 CDS YP_001043074.1 126461960 4895791 1237031..1237786 1 NC_009049.1 KEGG: rsp:RSP_2532 putative biotin protein ligase; TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; biotin--acetyl-CoA-carboxylase ligase 1237786 4895791 Rsph17029_1192 Rhodobacter sphaeroides ATCC 17029 biotin--acetyl-CoA-carboxylase ligase YP_001043074.1 1237031 D 349101 CDS YP_001043075.1 126461961 4895790 1237797..1238570 1 NC_009049.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1238570 4895790 Rsph17029_1193 Rhodobacter sphaeroides ATCC 17029 pantothenate kinase YP_001043075.1 1237797 D 349101 CDS YP_001043076.1 126461962 4895807 1238567..1240240 1 NC_009049.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rsp:RSP_2534 predicted hydrolase of the metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 1240240 4895807 Rsph17029_1194 Rhodobacter sphaeroides ATCC 17029 beta-lactamase domain-containing protein YP_001043076.1 1238567 D 349101 CDS YP_001043077.1 126461963 4895811 complement(1241037..1242587) 1 NC_009049.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_2536 ATP-dependent helicase, DEAD-box; DEAD/DEAH box helicase 1242587 4895811 Rsph17029_1195 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001043077.1 1241037 R 349101 CDS YP_001043078.1 126461964 4895806 complement(1242819..1244423) 1 NC_009049.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rsp:RSP_2537 probable peptide chain release factor RF3; peptide chain release factor 3 1244423 4895806 Rsph17029_1196 Rhodobacter sphaeroides ATCC 17029 peptide chain release factor 3 YP_001043078.1 1242819 R 349101 CDS YP_001043079.1 126461965 4895828 1244568..1245362 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_2538 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1245362 4895828 Rsph17029_1197 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001043079.1 1244568 D 349101 CDS YP_001043080.1 126461966 4895825 1245399..1246535 1 NC_009049.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_2539 ABC transporter, ATPase subunit; ABC transporter 1246535 4895825 Rsph17029_1198 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043080.1 1245399 D 349101 CDS YP_001043081.1 126461967 4895842 1246703..1246915 1 NC_009049.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rsp:RSP_2540 twin-arginine translocation system protein, TatA; twin arginine-targeting protein translocase 1246915 4895842 Rsph17029_1199 Rhodobacter sphaeroides ATCC 17029 twin arginine-targeting protein translocase YP_001043081.1 1246703 D 349101 CDS YP_001043082.1 126461968 4895841 1246926..1247402 1 NC_009049.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rsp:RSP_6059 twin-arginine translocation system protein, TatB; twin-arginine translocation protein subunit TatB 1247402 4895841 Rsph17029_1200 Rhodobacter sphaeroides ATCC 17029 twin-arginine translocation protein subunit TatB YP_001043082.1 1246926 D 349101 CDS YP_001043083.1 126461969 4895835 1247399..1248268 1 NC_009049.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rsp:RSP_2541 twin-arginine translocation system protein, TatC; Sec-independent protein translocase subunit TatC 1248268 4895835 Rsph17029_1201 Rhodobacter sphaeroides ATCC 17029 Sec-independent protein translocase subunit TatC YP_001043083.1 1247399 D 349101 CDS YP_001043084.1 126461970 4895829 1248265..1249104 1 NC_009049.1 PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: rsp:RSP_2542 ATPase; hypothetical protein 1249104 4895829 Rsph17029_1202 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043084.1 1248265 D 349101 CDS YP_001043085.1 126461971 4895884 complement(1249198..1250397) 1 NC_009049.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: rsp:RSP_2543 peptidoglycan-binding LysM (possible peptidase); peptidase M23B 1250397 4895884 Rsph17029_1203 Rhodobacter sphaeroides ATCC 17029 peptidase M23B YP_001043085.1 1249198 R 349101 CDS YP_001043086.1 126461972 4895851 complement(1250521..1251180) 1 NC_009049.1 KEGG: rsp:RSP_2544 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1251180 4895851 Rsph17029_1204 Rhodobacter sphaeroides ATCC 17029 protein-L-isoaspartate O-methyltransferase YP_001043086.1 1250521 R 349101 CDS YP_001043087.1 126461973 4895910 complement(1251177..1251962) 1 NC_009049.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1251962 4895910 Rsph17029_1205 Rhodobacter sphaeroides ATCC 17029 stationary phase survival protein SurE YP_001043087.1 1251177 R 349101 CDS YP_001043088.1 126461974 4895894 1252746..1253459 1 NC_009049.1 PFAM: sugar transferase; KEGG: rsp:RSP_2547 exopolysaccharide production protein ExoY; undecaprenyl-phosphate galactose phosphotransferase 1253459 4895894 Rsph17029_1206 Rhodobacter sphaeroides ATCC 17029 undecaprenyl-phosphate galactose phosphotransferase YP_001043088.1 1252746 D 349101 CDS YP_001043089.1 126461975 4895886 1253531..1254763 1 NC_009049.1 PFAM: polysaccharide export protein; KEGG: rsp:RSP_2548 outer membrane polysaccharide export protein, ExoF; polysaccharide export protein 1254763 4895886 Rsph17029_1207 Rhodobacter sphaeroides ATCC 17029 polysaccharide export protein YP_001043089.1 1253531 D 349101 CDS YP_001043090.1 126461976 4895876 complement(1254948..1256237) 1 NC_009049.1 PFAM: O-antigen polymerase; KEGG: rsp:RSP_2549 putative polysaccharide polymerase; O-antigen polymerase 1256237 4895876 Rsph17029_1208 Rhodobacter sphaeroides ATCC 17029 O-antigen polymerase YP_001043090.1 1254948 R 349101 CDS YP_001043091.1 126461977 4895950 complement(1256254..1257036) 1 NC_009049.1 PFAM: glycoside hydrolase, family 16; KEGG: rsp:RSP_2550 endo-beta-1,3-1,4-glycanase protein; licheninase 1257036 4895950 Rsph17029_1209 Rhodobacter sphaeroides ATCC 17029 licheninase YP_001043091.1 1256254 R 349101 CDS YP_001043092.1 126461978 4895931 1257242..1258672 1 NC_009049.1 PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2551 glycosyl transferase, family 2; glycosyl transferase family protein 1258672 4895931 Rsph17029_1210 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001043092.1 1257242 D 349101 CDS YP_001043093.1 126461979 4895928 complement(1258688..1259644) 1 NC_009049.1 PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2552 glycosyl transferase, family 2; glycosyl transferase family protein 1259644 4895928 Rsph17029_1211 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001043093.1 1258688 R 349101 CDS YP_001043094.1 126461980 4895917 complement(1259641..1260819) 1 NC_009049.1 KEGG: rsp:RSP_2553 hypothetical protein; hypothetical protein 1260819 4895917 Rsph17029_1212 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043094.1 1259641 R 349101 CDS YP_001043095.1 126461981 4896014 1261123..1261275 1 NC_009049.1 KEGG: rsp:RSP_2554 hypothetical protein; hypothetical protein 1261275 4896014 Rsph17029_1213 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043095.1 1261123 D 349101 CDS YP_001043096.1 126461982 4896000 1261356..1261622 1 NC_009049.1 KEGG: rsp:RSP_2555 hypothetical protein; hypothetical protein 1261622 4896000 Rsph17029_1214 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043096.1 1261356 D 349101 CDS YP_001043097.1 126461983 4896010 1261633..1262106 1 NC_009049.1 KEGG: rsp:RSP_2556 hypothetical protein; hypothetical protein 1262106 4896010 Rsph17029_1215 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043097.1 1261633 D 349101 CDS YP_001043098.1 126461984 4896008 1262103..1263983 1 NC_009049.1 PFAM: asparagine synthase; KEGG: rsp:RSP_2557 putative asparagine synthetase; asparagine synthase 1263983 4896008 Rsph17029_1216 Rhodobacter sphaeroides ATCC 17029 asparagine synthase YP_001043098.1 1262103 D 349101 CDS YP_001043099.1 126461985 4896011 1263980..1264900 1 NC_009049.1 KEGG: rsp:RSP_2558 hypothetical protein; HPr kinase 1264900 4896011 Rsph17029_1217 Rhodobacter sphaeroides ATCC 17029 HPr kinase YP_001043099.1 1263980 D 349101 CDS YP_001043100.1 126461986 4896006 1264897..1266753 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2559 ABC transporter, fused ATPase and inner membrane subunits; ABC transporter 1266753 4896006 Rsph17029_1218 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043100.1 1264897 D 349101 CDS YP_001043101.1 126461987 4896025 complement(1266887..1267144) 1 NC_009049.1 KEGG: rsp:RSP_6060 hypothetical protein; hypothetical protein 1267144 4896025 Rsph17029_1219 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043101.1 1266887 R 349101 CDS YP_001043102.1 126461988 4896021 complement(1267518..1269887) 1 NC_009049.1 PFAM: lipopolysaccharide biosynthesis; KEGG: rsp:RSP_2561 putative succinoglycan biosynthesis transport protein ExoP; lipopolysaccharide biosynthesis protein 1269887 4896021 Rsph17029_1220 Rhodobacter sphaeroides ATCC 17029 lipopolysaccharide biosynthesis protein YP_001043102.1 1267518 R 349101 CDS YP_001043103.1 126461989 4896019 complement(1269884..1270864) 1 NC_009049.1 PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2562 succinoglycan biosynthesis protein ExoM; glycosyl transferase family protein 1270864 4896019 Rsph17029_1221 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001043103.1 1269884 R 349101 CDS YP_001043104.1 126461990 4896023 complement(1270861..1271850) 1 NC_009049.1 PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2563 glycosyl transferase, family 2; glycosyl transferase family protein 1271850 4896023 Rsph17029_1222 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001043104.1 1270861 R 349101 CDS YP_001043105.1 126461991 4896018 complement(1271847..1273016) 1 NC_009049.1 KEGG: rsp:RSP_2564 glycosyltransferase, succinoglycan biosynthesis protein ExoL; glycosyltransferase, succinoglycan biosynthesis protein ExoL 1273016 4896018 Rsph17029_1223 Rhodobacter sphaeroides ATCC 17029 glycosyltransferase, succinoglycan biosynthesis protein ExoL YP_001043105.1 1271847 R 349101 CDS YP_001043106.1 126461992 4896034 complement(1273038..1274057) 1 NC_009049.1 KEGG: rsp:RSP_2565 UDPG-pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase GalU 1274057 4896034 Rsph17029_1224 Rhodobacter sphaeroides ATCC 17029 UTP-glucose-1-phosphate uridylyltransferase GalU YP_001043106.1 1273038 R 349101 CDS YP_001043107.1 126461993 4896027 complement(1274332..1275147) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_2567 putative sulfolipid biosynthesis protein; NAD-dependent epimerase/dehydratase 1275147 4896027 Rsph17029_1225 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001043107.1 1274332 R 349101 CDS YP_001043108.1 126461994 4896033 complement(1275132..1275968) 1 NC_009049.1 PFAM: glycosyl transferase, family 8; KEGG: rsp:RSP_2568 glycosyl transferase (sulfolipid biosynthesis) protein; glycosyl transferase family protein 1275968 4896033 Rsph17029_1226 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001043108.1 1275132 R 349101 CDS YP_001043109.1 126461995 4896026 complement(1275969..1277183) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rsp:RSP_2569 sulfolipid (UDP-sulfoquinovose) biosynthesis protein; NAD-dependent epimerase/dehydratase 1277183 4896026 Rsph17029_1227 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001043109.1 1275969 R 349101 CDS YP_001043110.1 126461996 4896071 complement(1277330..1277899) 1 NC_009049.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rsp:RSP_2570 protease I; PfpI family intracellular peptidase 1277899 4896071 Rsph17029_1228 Rhodobacter sphaeroides ATCC 17029 PfpI family intracellular peptidase YP_001043110.1 1277330 R 349101 CDS YP_001043111.1 126461997 4896053 1278303..1279334 1 NC_009049.1 PFAM: luciferase family protein; KEGG: rsp:RSP_2571 putative oxidoreductase protein; luciferase family protein 1279334 4896053 Rsph17029_1229 Rhodobacter sphaeroides ATCC 17029 luciferase family protein YP_001043111.1 1278303 D 349101 CDS YP_001043112.1 126461998 4896051 1279489..1280280 1 NC_009049.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rsp:RSP_2572 CrpK, Fnr-type transcriptional regulator; CRP/FNR family transcriptional regulator 1280280 4896051 Rsph17029_1230 Rhodobacter sphaeroides ATCC 17029 CRP/FNR family transcriptional regulator YP_001043112.1 1279489 D 349101 CDS YP_001043113.1 126461999 4896049 1280434..1281192 1 NC_009049.1 KEGG: rsp:RSP_2573 hypothetical protein; hypothetical protein 1281192 4896049 Rsph17029_1231 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043113.1 1280434 D 349101 CDS YP_001043114.1 126462000 4896076 complement(1281306..1281797) 1 NC_009049.1 KEGG: rsp:RSP_2574 hypothetical protein; hypothetical protein 1281797 4896076 Rsph17029_1232 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043114.1 1281306 R 349101 CDS YP_001043115.1 126462001 4896075 1282028..1282618 1 NC_009049.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 1282618 4896075 Rsph17029_1233 Rhodobacter sphaeroides ATCC 17029 glutathione-dependent formaldehyde-activating protein YP_001043115.1 1282028 D 349101 CDS YP_001043116.1 126462002 4896074 1282851..1283981 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_2576 alcohol dehydrogenase class III; alcohol dehydrogenase 1283981 4896074 Rsph17029_1234 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001043116.1 1282851 D 349101 CDS YP_001043117.1 126462003 4896055 1284111..1284545 1 NC_009049.1 PFAM: cytochrome c, class I; KEGG: rsp:RSP_2577 isocytochrome c2; cytochrome c, class I 1284545 4896055 Rsph17029_1235 Rhodobacter sphaeroides ATCC 17029 cytochrome c, class I YP_001043117.1 1284111 D 349101 CDS YP_001043118.1 126462004 4896110 1284755..1286557 1 NC_009049.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rsp:RSP_2578 putative pqq dehydrogenase protein; Pyrrolo-quinoline quinone 1286557 4896110 Rsph17029_1236 Rhodobacter sphaeroides ATCC 17029 Pyrrolo-quinoline quinone YP_001043118.1 1284755 D 349101 CDS YP_001043119.1 126462005 4896104 1286721..1287251 1 NC_009049.1 KEGG: rsp:RSP_2579 cytochrome c553i; cytochrome c553i 1287251 4896104 Rsph17029_1237 Rhodobacter sphaeroides ATCC 17029 cytochrome c553i YP_001043119.1 1286721 D 349101 CDS YP_001043120.1 126462006 4896094 1287239..1288063 1 NC_009049.1 SMART: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_2580 putative methanol oxidation protein; extracellular solute-binding protein 1288063 4896094 Rsph17029_1238 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043120.1 1287239 D 349101 CDS YP_001043121.1 126462007 4896091 1288060..1288587 1 NC_009049.1 KEGG: rsp:RSP_2581 rhodanese; rhodanese 1288587 4896091 Rsph17029_1239 Rhodobacter sphaeroides ATCC 17029 rhodanese YP_001043121.1 1288060 D 349101 CDS YP_001043122.1 126462008 4896127 1288621..1289805 1 NC_009049.1 KEGG: rsp:RSP_2582 hypothetical protein; hypothetical protein 1289805 4896127 Rsph17029_1240 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043122.1 1288621 D 349101 CDS YP_001043123.1 126462009 4896123 1289826..1290788 1 NC_009049.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: rsp:RSP_2583 hypothetical protein; hypothetical protein 1290788 4896123 Rsph17029_1241 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043123.1 1289826 D 349101 CDS YP_001043124.1 126462010 4896121 1290815..1291258 1 NC_009049.1 KEGG: rsp:RSP_2584 hypothetical protein; hypothetical protein 1291258 4896121 Rsph17029_1242 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043124.1 1290815 D 349101 CDS YP_001043125.1 126462011 4896107 1291274..1291522 1 NC_009049.1 KEGG: rsp:RSP_2585 hypothetical protein; hypothetical protein 1291522 4896107 Rsph17029_1243 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043125.1 1291274 D 349101 CDS YP_001043126.1 126462012 4896137 1291519..1292247 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2586 ABC multidrug efflux transporter, ATPase subunit; ABC transporter 1292247 4896137 Rsph17029_1244 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043126.1 1291519 D 349101 CDS YP_001043127.1 126462013 4896133 1292244..1293122 1 NC_009049.1 PFAM: ABC-2 type transporter; KEGG: rsp:RSP_2587 ABC multidrug efflux transporter, inner membrane subunit; ABC transporter 1293122 4896133 Rsph17029_1245 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043127.1 1292244 D 349101 CDS YP_001043128.1 126462014 4896132 1293132..1293725 1 NC_009049.1 KEGG: rsp:RSP_2588 hypothetical protein; hypothetical protein 1293725 4896132 Rsph17029_1246 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043128.1 1293132 D 349101 CDS YP_001043129.1 126462015 4896163 complement(1293870..1294964) 1 NC_009049.1 PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_2589 hypothetical protein; beta-lactamase domain-containing protein 1294964 4896163 Rsph17029_1247 Rhodobacter sphaeroides ATCC 17029 beta-lactamase domain-containing protein YP_001043129.1 1293870 R 349101 CDS YP_001043130.1 126462016 4896165 1295019..1295825 1 NC_009049.1 KEGG: rsp:RSP_2590 hypothetical protein; hypothetical protein 1295825 4896165 Rsph17029_1248 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043130.1 1295019 D 349101 CDS YP_001043131.1 126462017 4896186 1295992..1296699 1 NC_009049.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_2591 two component transcriptional regulator, LuxR family family; two component LuxR family transcriptional regulator 1296699 4896186 Rsph17029_1249 Rhodobacter sphaeroides ATCC 17029 two component LuxR family transcriptional regulator YP_001043131.1 1295992 D 349101 CDS YP_001043132.1 126462018 4896180 1296710..1297870 1 NC_009049.1 PFAM: domain of unknown function DUF1745; KEGG: rsp:RSP_2592 hypothetical protein; hypothetical protein 1297870 4896180 Rsph17029_1250 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043132.1 1296710 D 349101 CDS YP_001043133.1 126462019 4896176 1297860..1299293 1 NC_009049.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_2593 hybrid histidine kinase; histidine kinase 1299293 4896176 Rsph17029_1251 Rhodobacter sphaeroides ATCC 17029 histidine kinase YP_001043133.1 1297860 D 349101 CDS YP_001043134.1 126462020 4896174 1299304..1299912 1 NC_009049.1 KEGG: rsp:RSP_2594 hypothetical protein; hypothetical protein 1299912 4896174 Rsph17029_1252 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043134.1 1299304 D 349101 CDS YP_001043135.1 126462021 4896190 1299909..1300400 1 NC_009049.1 KEGG: rsp:RSP_2595 hypothetical protein; hypothetical protein 1300400 4896190 Rsph17029_1253 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043135.1 1299909 D 349101 CDS YP_001043136.1 126462022 4896199 complement(1300498..1301280) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2596 ABC transporter, ATPase subunit; ABC transporter 1301280 4896199 Rsph17029_1254 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043136.1 1300498 R 349101 CDS YP_001043137.1 126462023 4896197 complement(1301277..1302257) 1 NC_009049.1 KEGG: rsp:RSP_2597 ABC transporter, periplasmic substrate-binding protein; ABC transporter substrate-binding protein 1302257 4896197 Rsph17029_1255 Rhodobacter sphaeroides ATCC 17029 ABC transporter substrate-binding protein YP_001043137.1 1301277 R 349101 CDS YP_001043138.1 126462024 4896201 complement(1302277..1303077) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2598 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1303077 4896201 Rsph17029_1256 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043138.1 1302277 R 349101 CDS YP_001043139.1 126462025 4896192 complement(1303191..1303883) 1 NC_009049.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_2599 phosphate regulon transcriptional regulator, PhoR; two component transcriptional regulator 1303883 4896192 Rsph17029_1257 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001043139.1 1303191 R 349101 CDS YP_001043140.1 126462026 4896187 complement(1303883..1304608) 1 NC_009049.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rsp:RSP_2600 phosphate transport system regulatory protein; phosphate uptake regulator PhoU 1304608 4896187 Rsph17029_1258 Rhodobacter sphaeroides ATCC 17029 phosphate uptake regulator PhoU YP_001043140.1 1303883 R 349101 CDS YP_001043141.1 126462027 4896214 complement(1304619..1305416) 1 NC_009049.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1305416 4896214 Rsph17029_1259 Rhodobacter sphaeroides ATCC 17029 phosphate transporter ATP-binding protein YP_001043141.1 1304619 R 349101 CDS YP_001043142.1 126462028 4896209 complement(1305427..1306776) 1 NC_009049.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2602 ABC phosphate transporter, inner membrane subunit PstA; phosphate ABC transporter permease 1306776 4896209 Rsph17029_1260 Rhodobacter sphaeroides ATCC 17029 phosphate ABC transporter permease YP_001043142.1 1305427 R 349101 CDS YP_001043143.1 126462029 4896204 complement(1306773..1308218) 1 NC_009049.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2603 ABC phosphate transporter, inner membrane subunit PstC; phosphate ABC transporter permease 1308218 4896204 Rsph17029_1261 Rhodobacter sphaeroides ATCC 17029 phosphate ABC transporter permease YP_001043143.1 1306773 R 349101 CDS YP_001043144.1 126462030 4896236 complement(1308277..1309320) 1 NC_009049.1 KEGG: rsp:RSP_2604 ABC phosphate transporter, periplasmic phosphate-binding protein; phosphate ABC transporter, periplasmic phosphate-binding protein 1309320 4896236 Rsph17029_1262 Rhodobacter sphaeroides ATCC 17029 phosphate ABC transporter, periplasmic phosphate-binding protein YP_001043144.1 1308277 R 349101 CDS YP_001043145.1 126462031 4896226 complement(1309667..1310356) 1 NC_009049.1 PFAM: protein of unknown function DUF159; KEGG: rsp:RSP_2605 hypothetical protein; hypothetical protein 1310356 4896226 Rsph17029_1263 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043145.1 1309667 R 349101 CDS YP_001043146.1 126462032 4896229 complement(1310367..1310720) 1 NC_009049.1 PFAM: regulatory protein, ArsR; KEGG: rsp:RSP_2606 ArsR family arsenical resistance operon repressor; regulatory protein ArsR 1310720 4896229 Rsph17029_1264 Rhodobacter sphaeroides ATCC 17029 regulatory protein ArsR YP_001043146.1 1310367 R 349101 CDS YP_001043147.1 126462033 4896227 complement(1310787..1311287) 1 NC_009049.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: rsp:RSP_2607 nitrilotriacetate monooxygenase component B; flavin reductase domain-containing protein 1311287 4896227 Rsph17029_1265 Rhodobacter sphaeroides ATCC 17029 flavin reductase domain-containing protein YP_001043147.1 1310787 R 349101 CDS YP_001043148.1 126462034 4896232 1311524..1312519 1 NC_009049.1 PFAM: Mg2+ transporter protein, CorA family protein; KEGG: rsp:RSP_2608 magnesium/cobalt transport protein, MIT family; Fis family transcriptional regulator 1312519 4896232 Rsph17029_1266 Rhodobacter sphaeroides ATCC 17029 Fis family transcriptional regulator YP_001043148.1 1311524 D 349101 CDS YP_001043149.1 126462035 4896218 complement(1312664..1313740) 1 NC_009049.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 1313740 4896218 Rsph17029_1267 Rhodobacter sphaeroides ATCC 17029 2'-deoxycytidine 5'-triphosphate deaminase YP_001043149.1 1312664 R 349101 CDS YP_001043150.1 126462036 4897065 complement(1313964..1314782) 1 NC_009049.1 PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2610 trancriptional regulator, MerR family; MerR family transcriptional regulator 1314782 4897065 Rsph17029_1268 Rhodobacter sphaeroides ATCC 17029 MerR family transcriptional regulator YP_001043150.1 1313964 R 349101 CDS YP_001043151.1 126462037 4896254 complement(1314789..1315091) 1 NC_009049.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1315091 ihfA 4896254 ihfA Rhodobacter sphaeroides ATCC 17029 integration host factor subunit alpha YP_001043151.1 1314789 R 349101 CDS YP_001043152.1 126462038 4896248 complement(1315182..1316153) 1 NC_009049.1 KEGG: rsp:RSP_2612 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1316153 4896248 Rsph17029_1270 Rhodobacter sphaeroides ATCC 17029 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001043152.1 1315182 R 349101 CDS YP_001043153.1 126462039 4896246 complement(1316160..1317272) 1 NC_009049.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1317272 4896246 Rsph17029_1271 Rhodobacter sphaeroides ATCC 17029 putative glycerol-3-phosphate acyltransferase PlsX YP_001043153.1 1316160 R 349101 CDS YP_001043154.1 126462040 4896243 complement(1317299..1317505) 1 NC_009049.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1317505 rpmF 4896243 rpmF Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L32 YP_001043154.1 1317299 R 349101 CDS YP_001043155.1 126462041 4896297 complement(1317683..1318276) 1 NC_009049.1 KEGG: rsp:RSP_2615 hypothetical protein; hypothetical protein 1318276 4896297 Rsph17029_1273 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043155.1 1317683 R 349101 CDS YP_001043156.1 126462042 4896278 1318498..1318995 1 NC_009049.1 PFAM: SmpA/OmlA domain protein; KEGG: rsp:RSP_2616 hypothetical protein; SmpA/OmlA domain-containing protein 1318995 4896278 Rsph17029_1274 Rhodobacter sphaeroides ATCC 17029 SmpA/OmlA domain-containing protein YP_001043156.1 1318498 D 349101 CDS YP_001043157.1 126462043 4896270 complement(1319086..1319490) 1 NC_009049.1 KEGG: rsp:RSP_2617 peptide methionine sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 1319490 4896270 Rsph17029_1275 Rhodobacter sphaeroides ATCC 17029 methionine-R-sulfoxide reductase YP_001043157.1 1319086 R 349101 CDS YP_001043158.1 126462044 4896257 1319597..1320349 1 NC_009049.1 KEGG: rsp:RSP_2618 putative hemolysin; putative hemolysin 1320349 4896257 Rsph17029_1276 Rhodobacter sphaeroides ATCC 17029 putative hemolysin YP_001043158.1 1319597 D 349101 CDS YP_001043159.1 126462045 4896313 complement(1320356..1321495) 1 NC_009049.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1321495 mnmA 4896313 mnmA Rhodobacter sphaeroides ATCC 17029 tRNA-specific 2-thiouridylase MnmA YP_001043159.1 1320356 R 349101 CDS YP_001043160.1 126462046 4896306 1321619..1321897 1 NC_009049.1 PFAM: protein of unknown function DUF1153; KEGG: rsp:RSP_2620 hypothetical protein; hypothetical protein 1321897 4896306 Rsph17029_1278 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043160.1 1321619 D 349101 CDS YP_001043161.1 126462047 4896299 1321994..1322707 1 NC_009049.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_2621 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1322707 4896299 Rsph17029_1279 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001043161.1 1321994 D 349101 CDS YP_001043162.1 126462048 4896320 1322803..1324917 1 NC_009049.1 KEGG: rsp:RSP_2622 DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: NAD-dependent DNA ligase-like; NAD-dependent DNA ligase 1324917 4896320 Rsph17029_1280 Rhodobacter sphaeroides ATCC 17029 NAD-dependent DNA ligase YP_001043162.1 1322803 D 349101 CDS YP_001043163.1 126462049 4896329 1324914..1327001 1 NC_009049.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1327001 4896329 Rsph17029_1281 Rhodobacter sphaeroides ATCC 17029 ATP-dependent DNA helicase RecG YP_001043163.1 1324914 D 349101 CDS YP_001043164.1 126462050 4896327 1327253..1327375 1 NC_009049.1 KEGG: rsp:RSP_2624 hypothetical protein; hypothetical protein 1327375 4896327 Rsph17029_1282 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043164.1 1327253 D 349101 CDS YP_001043165.1 126462051 4896330 complement(1327526..1327966) 1 NC_009049.1 KEGG: rsp:RSP_2625 NifU-related protein involved in Fe-S cluster formation; NifU-related protein involved in Fe-S cluster formation 1327966 4896330 Rsph17029_1283 Rhodobacter sphaeroides ATCC 17029 NifU-related protein involved in Fe-S cluster formation YP_001043165.1 1327526 R 349101 CDS YP_001043166.1 126462052 4896322 1328032..1328391 1 NC_009049.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: rsp:RSP_2627 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1328391 4896322 Rsph17029_1284 Rhodobacter sphaeroides ATCC 17029 phosphoribosyl-AMP cyclohydrolase YP_001043166.1 1328032 D 349101 CDS YP_001043167.1 126462053 4896314 complement(1328584..1329417) 1 NC_009049.1 PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: rsp:RSP_2628 glutamyl-/glutaminyl-tRNA synthetase; glutamyl-tRNA synthetase 1329417 4896314 Rsph17029_1285 Rhodobacter sphaeroides ATCC 17029 glutamyl-tRNA synthetase YP_001043167.1 1328584 R 349101 CDS YP_001043168.1 126462054 4896336 complement(1329402..1330736) 1 NC_009049.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1330736 4896336 Rsph17029_1286 Rhodobacter sphaeroides ATCC 17029 tRNA (uracil-5-)-methyltransferase Gid YP_001043168.1 1329402 R 349101 CDS YP_001043169.1 126462055 4896335 complement(1330740..1333463) 1 NC_009049.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1333463 4896335 Rsph17029_1287 Rhodobacter sphaeroides ATCC 17029 DNA gyrase subunit A YP_001043169.1 1330740 R 349101 CDS YP_001043170.1 126462056 4896331 1333706..1333969 1 NC_009049.1 PFAM: Usg family protein; KEGG: rsp:RSP_2631 USG protein; Usg family protein 1333969 4896331 Rsph17029_1288 Rhodobacter sphaeroides ATCC 17029 Usg family protein YP_001043170.1 1333706 D 349101 CDS YP_001043171.1 126462057 4896351 complement(1334101..1335027) 1 NC_009049.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rsp:RSP_2632 arginase; arginase 1335027 4896351 Rsph17029_1289 Rhodobacter sphaeroides ATCC 17029 arginase YP_001043171.1 1334101 R 349101 CDS YP_001043172.1 126462058 4896340 1335515..1337485 1 NC_009049.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rsp:RSP_2633 cytochrome c maturation protein, CcmF; cytochrome c-type biogenesis protein CcmF 1337485 4896340 Rsph17029_1290 Rhodobacter sphaeroides ATCC 17029 cytochrome c-type biogenesis protein CcmF YP_001043172.1 1335515 D 349101 CDS YP_001043173.1 126462059 4896338 1337482..1337937 1 NC_009049.1 PFAM: cytochrome C biogenesis protein; KEGG: rsp:RSP_2634 cytochrome c maturation protein, CcmH; cytochrome C biogenesis protein 1337937 4896338 Rsph17029_1291 Rhodobacter sphaeroides ATCC 17029 cytochrome C biogenesis protein YP_001043173.1 1337482 D 349101 CDS YP_001043174.1 126462060 4896363 1337999..1338775 1 NC_009049.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: jan:Jann_2154 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1338775 4896363 Rsph17029_1292 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase/isomerase YP_001043174.1 1337999 D 349101 CDS YP_001043175.1 126462061 4896359 complement(1338827..1339387) 1 NC_009049.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1339387 ilvH 4896359 ilvH Rhodobacter sphaeroides ATCC 17029 acetolactate synthase 3 regulatory subunit YP_001043175.1 1338827 R 349101 CDS YP_001043176.1 126462062 4896357 complement(1339470..1341236) 1 NC_009049.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rsp:RSP_2637 acetolactate synthase III large subunit; acetolactate synthase 3 catalytic subunit 1341236 4896357 Rsph17029_1294 Rhodobacter sphaeroides ATCC 17029 acetolactate synthase 3 catalytic subunit YP_001043176.1 1339470 R 349101 CDS YP_001043177.1 126462063 4896347 complement(1341531..1342448) 1 NC_009049.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: rsp:RSP_2638 putative sodium/calcium exchanger; CaCA family Na(+)/Ca(+) antiporter 1342448 4896347 Rsph17029_1295 Rhodobacter sphaeroides ATCC 17029 CaCA family Na(+)/Ca(+) antiporter YP_001043177.1 1341531 R 349101 CDS YP_001043178.1 126462064 4896387 complement(1342939..1343781) 1 NC_009049.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 1343781 4896387 Rsph17029_1296 Rhodobacter sphaeroides ATCC 17029 arginyl-tRNA-protein transferase YP_001043178.1 1342939 R 349101 CDS YP_001043179.1 126462065 4896386 complement(1343888..1344340) 1 NC_009049.1 PFAM: RDD domain containing protein; KEGG: rsp:RSP_2640 hypothetical protein; RDD domain-containing protein 1344340 4896386 Rsph17029_1297 Rhodobacter sphaeroides ATCC 17029 RDD domain-containing protein YP_001043179.1 1343888 R 349101 CDS YP_001043180.1 126462066 4896383 complement(1344777..1345187) 1 NC_009049.1 KEGG: rsp:RSP_2641 hypothetical protein; hypothetical protein 1345187 4896383 Rsph17029_1298 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043180.1 1344777 R 349101 CDS YP_001043181.1 126462067 4896401 complement(1345628..1346098) 1 NC_009049.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rsp:RSP_2642 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 1346098 4896401 Rsph17029_1299 Rhodobacter sphaeroides ATCC 17029 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001043181.1 1345628 R 349101 CDS YP_001043182.1 126462068 4896391 1346276..1349089 1 NC_009049.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: rsp:RSP_2643 glutamate-ammonia-ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 1349089 4896391 Rsph17029_1300 Rhodobacter sphaeroides ATCC 17029 (glutamate--ammonia-ligase) adenylyltransferase YP_001043182.1 1346276 D 349101 CDS YP_001043183.1 126462069 4896390 1349076..1349345 1 NC_009049.1 KEGG: rsp:RSP_2644 hypothetical protein; hypothetical protein 1349345 4896390 Rsph17029_1301 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043183.1 1349076 D 349101 CDS YP_001043184.1 126462070 4896389 complement(1349543..1350181) 1 NC_009049.1 KEGG: rsp:RSP_2645 KDPG/KHG bifunctional aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 1350181 4896389 Rsph17029_1302 Rhodobacter sphaeroides ATCC 17029 2-dehydro-3-deoxyphosphogluconate aldolase YP_001043184.1 1349543 R 349101 CDS YP_001043185.1 126462071 4896435 complement(1350442..1352247) 1 NC_009049.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 1352247 4896435 Rsph17029_1303 Rhodobacter sphaeroides ATCC 17029 phosphogluconate dehydratase YP_001043185.1 1350442 R 349101 CDS YP_001043186.1 126462072 4896416 1352891..1354081 1 NC_009049.1 KEGG: rsp:RSP_2647 predicted SAM-dependent methyltransferase; SAM-dependent methyltransferase 1354081 4896416 Rsph17029_1304 Rhodobacter sphaeroides ATCC 17029 SAM-dependent methyltransferase YP_001043186.1 1352891 D 349101 CDS YP_001043187.1 126462073 4896413 1354078..1354620 1 NC_009049.1 KEGG: rsp:RSP_2648 hypothetical protein; hypothetical protein 1354620 4896413 Rsph17029_1305 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043187.1 1354078 D 349101 CDS YP_001043188.1 126462074 4896417 complement(1354671..1355357) 1 NC_009049.1 PFAM: peptidase M48, Ste24p; KEGG: rsp:RSP_2649 putative Zn-dependent protease; peptidase M48, Ste24p 1355357 4896417 Rsph17029_1306 Rhodobacter sphaeroides ATCC 17029 peptidase M48, Ste24p YP_001043188.1 1354671 R 349101 CDS YP_001043189.1 126462075 4896452 complement(1355420..1356604) 1 NC_009049.1 KEGG: rsp:RSP_2650 hypothetical protein; hypothetical protein 1356604 4896452 Rsph17029_1307 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043189.1 1355420 R 349101 CDS YP_001043190.1 126462076 4896474 complement(1356627..1356791) 1 NC_009049.1 hypothetical protein 1356791 4896474 Rsph17029_1308 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043190.1 1356627 R 349101 CDS YP_001043191.1 126462077 4896504 complement(1356788..1358188) 1 NC_009049.1 KEGG: rsp:RSP_2651 hypothetical protein; hypothetical protein 1358188 4896504 Rsph17029_1309 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043191.1 1356788 R 349101 CDS YP_001043192.1 126462078 4896510 complement(1358188..1358640) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2652 putative acetyltransferase; N-acetyltransferase GCN5 1358640 4896510 Rsph17029_1310 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001043192.1 1358188 R 349101 CDS YP_001043193.1 126462079 4896515 complement(1358679..1359518) 1 NC_009049.1 PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_2653 ATPase, AAA family; ATPase 1359518 4896515 Rsph17029_1311 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001043193.1 1358679 R 349101 CDS YP_001043194.1 126462080 4896608 1359651..1360127 1 NC_009049.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: rsp:RSP_2654 DnaK suppressor protein, DksA family; TraR/DksA family transcriptional regulator 1360127 4896608 Rsph17029_1312 Rhodobacter sphaeroides ATCC 17029 TraR/DksA family transcriptional regulator YP_001043194.1 1359651 D 349101 CDS YP_001043195.1 126462081 4896648 1360223..1361398 1 NC_009049.1 PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: rsp:RSP_2656 putative salicylate hydroxylase (salicylate 1-monooxygenase); FAD-binding monooxygenase 1361398 4896648 Rsph17029_1313 Rhodobacter sphaeroides ATCC 17029 FAD-binding monooxygenase YP_001043195.1 1360223 D 349101 CDS YP_001043196.1 126462082 4896632 complement(1361395..1361856) 1 NC_009049.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_2655 hypothetical protein; hypothetical protein 1361856 4896632 Rsph17029_1314 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043196.1 1361395 R 349101 CDS YP_001043197.1 126462083 4896631 complement(1361936..1362715) 1 NC_009049.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_2657 exodeoxyribonuclease III; exodeoxyribonuclease III 1362715 4896631 Rsph17029_1315 Rhodobacter sphaeroides ATCC 17029 exodeoxyribonuclease III YP_001043197.1 1361936 R 349101 CDS YP_001043198.1 126462084 4896654 complement(1362792..1363118) 1 NC_009049.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rsp:RSP_2658 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly accessory protein 1363118 4896654 Rsph17029_1316 Rhodobacter sphaeroides ATCC 17029 iron-sulfur cluster assembly accessory protein YP_001043198.1 1362792 R 349101 CDS YP_001043199.1 126462085 4896652 1363193..1364329 1 NC_009049.1 KEGG: rsp:RSP_2659 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; putative deoxyguanosinetriphosphate triphosphohydrolase 1364329 4896652 Rsph17029_1317 Rhodobacter sphaeroides ATCC 17029 putative deoxyguanosinetriphosphate triphosphohydrolase YP_001043199.1 1363193 D 349101 CDS YP_001043200.1 126462086 4896651 1364499..1365473 1 NC_009049.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rsp:RSP_2660 ribonuclease BN family protein; putative ribonuclease BN 1365473 4896651 Rsph17029_1318 Rhodobacter sphaeroides ATCC 17029 putative ribonuclease BN YP_001043200.1 1364499 D 349101 CDS YP_001043201.1 126462087 4896684 complement(1365479..1366621) 1 NC_009049.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rsp:RSP_2661 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1366621 4896684 Rsph17029_1319 Rhodobacter sphaeroides ATCC 17029 iron-containing alcohol dehydrogenase YP_001043201.1 1365479 R 349101 CDS YP_001043202.1 126462088 4896677 complement(1366618..1368099) 1 NC_009049.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_2662 glycerol kinase; glycerol kinase 1368099 4896677 Rsph17029_1320 Rhodobacter sphaeroides ATCC 17029 glycerol kinase YP_001043202.1 1366618 R 349101 CDS YP_001043203.1 126462089 4896664 complement(1368489..1370213) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2663 ABC sugar (glycerol) transporter, periplasmic binding protein; extracellular solute-binding protein 1370213 4896664 Rsph17029_1321 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043203.1 1368489 R 349101 CDS YP_001043204.1 126462090 4896663 complement(1370275..1370547) 1 NC_009049.1 KEGG: rsp:RSP_2664 hypothetical protein; hypothetical protein 1370547 4896663 Rsph17029_1322 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043204.1 1370275 R 349101 CDS YP_001043205.1 126462091 4896661 complement(1370549..1371352) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2665 ABC sugar (glycerol) transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1371352 4896661 Rsph17029_1323 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043205.1 1370549 R 349101 CDS YP_001043206.1 126462092 4896697 complement(1371390..1372262) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2666 ABC sugar (glycerol) transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1372262 4896697 Rsph17029_1324 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043206.1 1371390 R 349101 CDS YP_001043207.1 126462093 4896692 complement(1372262..1373347) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2667 ABC sugar (glycerol) transporter, ATPase subunit; ABC transporter 1373347 4896692 Rsph17029_1325 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043207.1 1372262 R 349101 CDS YP_001043208.1 126462094 4896689 complement(1373358..1374446) 1 NC_009049.1 PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: rsp:RSP_2669 ABC sugar (glycerol) transporter, ATPase subunit; ABC transporter 1374446 4896689 Rsph17029_1326 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043208.1 1373358 R 349101 CDS YP_001043209.1 126462095 4896695 complement(1374576..1376195) 1 NC_009049.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 1376195 glpD 4896695 glpD Rhodobacter sphaeroides ATCC 17029 glycerol-3-phosphate dehydrogenase YP_001043209.1 1374576 R 349101 CDS YP_001043210.1 126462096 4896685 complement(1376656..1376931) 1 NC_009049.1 KEGG: rsp:RSP_2671 hypothetical protein; hypothetical protein 1376931 4896685 Rsph17029_1328 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043210.1 1376656 R 349101 CDS YP_001043211.1 126462097 4896715 1377098..1377457 1 NC_009049.1 KEGG: rsp:RSP_2672 hypothetical protein; hypothetical protein 1377457 4896715 Rsph17029_1329 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043211.1 1377098 D 349101 CDS YP_001043212.1 126462098 4896704 complement(1377552..1379897) 1 NC_009049.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rsp:RSP_2673 glucose dehydrogenase; quinoprotein glucose dehydrogenase 1379897 4896704 Rsph17029_1330 Rhodobacter sphaeroides ATCC 17029 quinoprotein glucose dehydrogenase YP_001043212.1 1377552 R 349101 CDS YP_001043213.1 126462099 4896703 complement(1380100..1380669) 1 NC_009049.1 PFAM: PRC-barrel domain protein; KEGG: rsp:RSP_2674 hypothetical protein; PRC-barrel domain-containing protein 1380669 4896703 Rsph17029_1331 Rhodobacter sphaeroides ATCC 17029 PRC-barrel domain-containing protein YP_001043213.1 1380100 R 349101 CDS YP_001043214.1 126462100 4896702 complement(1381084..1381878) 1 NC_009049.1 KEGG: rsp:RSP_2675 hypothetical protein; hypothetical protein 1381878 4896702 Rsph17029_1332 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043214.1 1381084 R 349101 CDS YP_001043215.1 126462101 4896720 complement(1382002..1382913) 1 NC_009049.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: rsp:RSP_2676 hypothetical protein; transport-associated 1382913 4896720 Rsph17029_1333 Rhodobacter sphaeroides ATCC 17029 transport-associated YP_001043215.1 1382002 R 349101 CDS YP_001043216.1 126462102 4896719 complement(1383919..1384299) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_6064 response regulator receiver domain protein; response regulator receiver protein 1384299 4896719 Rsph17029_1334 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001043216.1 1383919 R 349101 CDS YP_001043217.1 126462103 4896717 1384612..1385364 1 NC_009049.1 PFAM: MgtC/SapB transporter; KEGG: rsp:RSP_2677 putative Mg++ transport associated protein, MgtC; MgtC/SapB transporter 1385364 4896717 Rsph17029_1335 Rhodobacter sphaeroides ATCC 17029 MgtC/SapB transporter YP_001043217.1 1384612 D 349101 CDS YP_001043218.1 126462104 4896729 complement(1385552..1385806) 1 NC_009049.1 KEGG: rsp:RSP_2678 hypothetical protein; hypothetical protein 1385806 4896729 Rsph17029_1336 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043218.1 1385552 R 349101 CDS YP_001043219.1 126462105 4896726 complement(1385803..1388409) 1 NC_009049.1 PFAM: DNA primase, small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: rsp:RSP_2679 ATP-dependent DNA ligase; ATP dependent DNA ligase 1388409 4896726 Rsph17029_1337 Rhodobacter sphaeroides ATCC 17029 ATP dependent DNA ligase YP_001043219.1 1385803 R 349101 CDS YP_001043220.1 126462106 4896745 complement(1389180..1389395) 1 NC_009049.1 KEGG: rsp:RSP_6225 hypothetical protein; hypothetical protein 1389395 4896745 Rsph17029_1338 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043220.1 1389180 R 349101 CDS YP_001043221.1 126462107 4896743 1389523..1390029 1 NC_009049.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rsp:RSP_2681 sigma factor, RpoE; ECF subfamily RNA polymerase sigma-24 factor 1390029 4896743 Rsph17029_1339 Rhodobacter sphaeroides ATCC 17029 ECF subfamily RNA polymerase sigma-24 factor YP_001043221.1 1389523 D 349101 CDS YP_001043222.1 126462108 4896748 1390259..1391191 1 NC_009049.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: rsp:RSP_2682 acyl-carrier-protein S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 1391191 4896748 Rsph17029_1340 Rhodobacter sphaeroides ATCC 17029 malonyl CoA-acyl carrier protein transacylase YP_001043222.1 1390259 D 349101 CDS YP_001043223.1 126462109 4896759 complement(1391422..1391652) 1 NC_009049.1 PFAM: protein of unknown function DUF1289; KEGG: rsp:RSP_2683 hypothetical protein; hypothetical protein 1391652 4896759 Rsph17029_1341 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043223.1 1391422 R 349101 CDS YP_001043224.1 126462110 4896758 complement(1391649..1392131) 1 NC_009049.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1392131 4896758 Rsph17029_1342 Rhodobacter sphaeroides ATCC 17029 Holliday junction resolvase-like protein YP_001043224.1 1391649 R 349101 CDS YP_001043225.1 126462111 4896755 complement(1392128..1393375) 1 NC_009049.1 KEGG: rsp:RSP_2685 putative cytochrome c-type biogenesis protein, CycH; cytochrome C biogenesis protein 1393375 4896755 Rsph17029_1343 Rhodobacter sphaeroides ATCC 17029 cytochrome C biogenesis protein YP_001043225.1 1392128 R 349101 CDS YP_001043226.1 126462112 4896771 1393578..1394825 1 NC_009049.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2686 putative sarcosine oxidase beta subunit; sarcosine oxidase subunit beta 1394825 4896771 Rsph17029_1344 Rhodobacter sphaeroides ATCC 17029 sarcosine oxidase subunit beta YP_001043226.1 1393578 D 349101 CDS YP_001043227.1 126462113 4896770 1394905..1395279 1 NC_009049.1 KEGG: rsp:RSP_2687 cytochrome b-c1 subunit IV; cytochrome b-c1 subunit IV 1395279 4896770 Rsph17029_1345 Rhodobacter sphaeroides ATCC 17029 cytochrome b-c1 subunit IV YP_001043227.1 1394905 D 349101 CDS YP_001043228.1 126462114 4896772 1395319..1395642 1 NC_009049.1 PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: rsp:RSP_2688 putative sarcosine oxidase delta subunit protein; sarcosine oxidase, delta subunit, heterotetrameric 1395642 4896772 Rsph17029_1346 Rhodobacter sphaeroides ATCC 17029 sarcosine oxidase, delta subunit, heterotetrameric YP_001043228.1 1395319 D 349101 CDS YP_001043229.1 126462115 4896761 1395639..1398620 1 NC_009049.1 TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: rsp:RSP_2689 putative sarcosine oxidase, alpha subunit; sarcosine oxidase subunit alpha 1398620 4896761 Rsph17029_1347 Rhodobacter sphaeroides ATCC 17029 sarcosine oxidase subunit alpha YP_001043229.1 1395639 D 349101 CDS YP_001043230.1 126462116 4896781 1398613..1399170 1 NC_009049.1 PFAM: Sarcosine oxidase, gamma subunit; KEGG: rsp:RSP_2690 putative sarcosine oxidase gamma subunit; sarcosine oxidase, gamma subunit 1399170 4896781 Rsph17029_1348 Rhodobacter sphaeroides ATCC 17029 sarcosine oxidase, gamma subunit YP_001043230.1 1398613 D 349101 CDS YP_001043231.1 126462117 4896777 complement(1399237..1401126) 1 NC_009049.1 PFAM: acyltransferase 3; KEGG: rsp:RSP_2692 acyltransferase domain (LPS); acyltransferase 3 1401126 4896777 Rsph17029_1349 Rhodobacter sphaeroides ATCC 17029 acyltransferase 3 YP_001043231.1 1399237 R 349101 CDS YP_001043232.1 126462118 4896773 1401382..1401981 1 NC_009049.1 PFAM: manganese and iron superoxide dismutase; KEGG: rsp:RSP_2693 superoxide dismutase, Fe-Mn family; superoxide dismutase 1401981 4896773 Rsph17029_1350 Rhodobacter sphaeroides ATCC 17029 superoxide dismutase YP_001043232.1 1401382 D 349101 CDS YP_001043233.1 126462119 4896800 complement(1402135..1402689) 1 NC_009049.1 PFAM: conserved hypothetical protein 730; KEGG: rsp:RSP_2694 hypothetical protein; hypothetical protein 1402689 4896800 Rsph17029_1351 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043233.1 1402135 R 349101 CDS YP_001043234.1 126462120 4896799 1402790..1404112 1 NC_009049.1 PFAM: Peptidoglycan-binding LysM; KEGG: rsp:RSP_2695 possible peptidoglycan binding protein; peptidoglycan-binding LysM 1404112 4896799 Rsph17029_1352 Rhodobacter sphaeroides ATCC 17029 peptidoglycan-binding LysM YP_001043234.1 1402790 D 349101 CDS YP_001043235.1 126462121 4896825 1404198..1406036 1 NC_009049.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2696 ABC transporter, fused ATPase and inner membrane subunits; ABC transporter 1406036 4896825 Rsph17029_1353 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043235.1 1404198 D 349101 CDS YP_001043236.1 126462122 4896824 1406136..1406783 1 NC_009049.1 KEGG: rsp:RSP_2697 hypothetical protein; hypothetical protein 1406783 4896824 Rsph17029_1354 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043236.1 1406136 D 349101 CDS YP_001043237.1 126462123 4896819 1406811..1408175 1 NC_009049.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rsp:RSP_2698 putative quinoprotein; Pyrrolo-quinoline quinone 1408175 4896819 Rsph17029_1355 Rhodobacter sphaeroides ATCC 17029 Pyrrolo-quinoline quinone YP_001043237.1 1406811 D 349101 CDS YP_001043238.1 126462124 4896835 1408234..1409697 1 NC_009049.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1409697 engA 4896835 engA Rhodobacter sphaeroides ATCC 17029 GTP-binding protein EngA YP_001043238.1 1408234 D 349101 CDS YP_001043239.1 126462125 4896843 complement(1409940..1411919) 1 NC_009049.1 KEGG: rsp:RSP_2700 ABC oligo/dipeptide transporter, fused ATPase subunits; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1411919 4896843 Rsph17029_1357 Rhodobacter sphaeroides ATCC 17029 oligopeptide/dipeptide ABC transporter ATPase YP_001043239.1 1409940 R 349101 CDS YP_001043240.1 126462126 4896842 complement(1411912..1413066) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2701 ABC oligo/dipeptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1413066 4896842 Rsph17029_1358 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043240.1 1411912 R 349101 CDS YP_001043241.1 126462127 4896844 complement(1413066..1414091) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2702 ABC oligo/dipeptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1414091 4896844 Rsph17029_1359 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043241.1 1413066 R 349101 CDS YP_001043242.1 126462128 4896840 complement(1414095..1415726) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_2703 ABC dipeptide transporter, periplasmic binding protein; extracellular solute-binding protein 1415726 4896840 Rsph17029_1360 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043242.1 1414095 R 349101 CDS YP_001043243.1 126462129 4896834 complement(1415928..1416872) 1 NC_009049.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1416872 miaA 4896834 miaA Rhodobacter sphaeroides ATCC 17029 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001043243.1 1415928 R 349101 CDS YP_001043244.1 126462130 4896859 1416962..1417702 1 NC_009049.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1417702 pyrH 4896859 pyrH Rhodobacter sphaeroides ATCC 17029 uridylate kinase YP_001043244.1 1416962 D 349101 CDS YP_001043245.1 126462131 4896853 1417788..1418354 1 NC_009049.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1418354 frr 4896853 frr Rhodobacter sphaeroides ATCC 17029 ribosome recycling factor YP_001043245.1 1417788 D 349101 CDS YP_001043246.1 126462132 4896847 1418424..1419167 1 NC_009049.1 KEGG: rsp:RSP_2707 undecaprenyl pyrophosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1419167 4896847 Rsph17029_1364 Rhodobacter sphaeroides ATCC 17029 undecaprenyl diphosphate synthase YP_001043246.1 1418424 D 349101 CDS YP_001043247.1 126462133 4896947 1419164..1419985 1 NC_009049.1 PFAM: phosphatidate cytidylyltransferase; KEGG: rsp:RSP_2708 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1419985 4896947 Rsph17029_1365 Rhodobacter sphaeroides ATCC 17029 phosphatidate cytidylyltransferase YP_001043247.1 1419164 D 349101 CDS YP_001043248.1 126462134 4896945 1419994..1421178 1 NC_009049.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1421178 4896945 Rsph17029_1366 Rhodobacter sphaeroides ATCC 17029 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001043248.1 1419994 D 349101 CDS YP_001043249.1 126462135 4896971 1421185..1422519 1 NC_009049.1 KEGG: rsp:RSP_2710 putative membrane-associated zinc metalloprotease; TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; putative membrane-associated zinc metalloprotease 1422519 4896971 Rsph17029_1367 Rhodobacter sphaeroides ATCC 17029 putative membrane-associated zinc metalloprotease YP_001043249.1 1421185 D 349101 CDS YP_001043250.1 126462136 4896991 1422682..1422819 1 NC_009049.1 hypothetical protein 1422819 4896991 Rsph17029_1368 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043250.1 1422682 D 349101 CDS YP_001043251.1 126462137 4897003 1422913..1425312 1 NC_009049.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rsp:RSP_2711 putative outer membrane protein; surface antigen (D15) 1425312 4897003 Rsph17029_1369 Rhodobacter sphaeroides ATCC 17029 surface antigen (D15) YP_001043251.1 1422913 D 349101 CDS YP_001043252.1 126462138 4897005 1425312..1426004 1 NC_009049.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: rsp:RSP_6204 hypothetical protein; outer membrane chaperone Skp 1426004 4897005 Rsph17029_1370 Rhodobacter sphaeroides ATCC 17029 outer membrane chaperone Skp YP_001043252.1 1425312 D 349101 CDS YP_001043253.1 126462139 4896972 1426090..1426557 1 NC_009049.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1426557 fabZ 4896972 fabZ Rhodobacter sphaeroides ATCC 17029 (3R)-hydroxymyristoyl-ACP dehydratase YP_001043253.1 1426090 D 349101 CDS YP_001043254.1 126462140 4897009 1426561..1427343 1 NC_009049.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1427343 4897009 Rsph17029_1372 Rhodobacter sphaeroides ATCC 17029 UDP-N-acetylglucosamine acyltransferase YP_001043254.1 1426561 D 349101 CDS YP_001043255.1 126462141 4897159 1427340..1428161 1 NC_009049.1 PFAM: protein of unknown function DUF1009; KEGG: rsp:RSP_2715 hypothetical protein; hypothetical protein 1428161 4897159 Rsph17029_1373 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043255.1 1427340 D 349101 CDS YP_001043256.1 126462142 4897142 1428158..1429297 1 NC_009049.1 KEGG: rsp:RSP_2716 putative lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase, family 19; lipid-A-disaccharide synthase 1429297 4897142 Rsph17029_1374 Rhodobacter sphaeroides ATCC 17029 lipid-A-disaccharide synthase YP_001043256.1 1428158 D 349101 CDS YP_001043257.1 126462143 4897153 1429420..1431243 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2717 putative UUP ATPase; ABC transporter 1431243 4897153 Rsph17029_1375 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043257.1 1429420 D 349101 CDS YP_001043258.1 126462144 4897076 1431456..1432058 1 NC_009049.1 KEGG: rsp:RSP_2718 possible outer membrane protein; putative outer membrane protein 1432058 4897076 Rsph17029_1376 Rhodobacter sphaeroides ATCC 17029 putative outer membrane protein YP_001043258.1 1431456 D 349101 CDS YP_001043259.1 126462145 4897160 1432292..1432741 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_2719 transcriptional regulator, AsnC/Lrp family; AsnC family transcriptional regulator 1432741 4897160 Rsph17029_1377 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001043259.1 1432292 D 349101 CDS YP_001043260.1 126462146 4897312 1433115..1433723 1 NC_009049.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rsp:RSP_2720 putative LysE/RhtB family amino acid efflux pump; lysine exporter protein LysE/YggA 1433723 4897312 Rsph17029_1378 Rhodobacter sphaeroides ATCC 17029 lysine exporter protein LysE/YggA YP_001043260.1 1433115 D 349101 CDS YP_001043261.1 126462147 4897301 complement(1433720..1434058) 1 NC_009049.1 PFAM: protein of unknown function DUF419; KEGG: rsp:RSP_2721 hypothetical protein; hypothetical protein 1434058 4897301 Rsph17029_1379 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043261.1 1433720 R 349101 CDS YP_001043262.1 126462148 4897214 1434275..1435735 1 NC_009049.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1435735 cysS 4897214 cysS Rhodobacter sphaeroides ATCC 17029 cysteinyl-tRNA synthetase YP_001043262.1 1434275 D 349101 CDS YP_001043263.1 126462149 4897427 1435837..1437489 1 NC_009049.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rsp:RSP_2723 2-isopropylmalate synthase; putative alpha-isopropylmalate/homocitrate synthase family transferase 1437489 4897427 Rsph17029_1381 Rhodobacter sphaeroides ATCC 17029 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_001043263.1 1435837 D 349101 CDS YP_001043264.1 126462150 4897425 1437486..1438205 1 NC_009049.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_2724 probable methylase involved in ubiquinone/menaquinone biosynthesis; type 12 methyltransferase 1438205 4897425 Rsph17029_1382 Rhodobacter sphaeroides ATCC 17029 type 12 methyltransferase YP_001043264.1 1437486 D 349101 CDS YP_001043265.1 126462151 4897403 1438202..1438969 1 NC_009049.1 KEGG: rsp:RSP_2725 probable phytoene/squalene synthetase; putative phytoene/squalene synthetase 1438969 4897403 Rsph17029_1383 Rhodobacter sphaeroides ATCC 17029 putative phytoene/squalene synthetase YP_001043265.1 1438202 D 349101 CDS YP_001043266.1 126462152 4897486 complement(1438973..1440193) 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2726 multidrug/metabolite efflux pump, major facilitator superfamily (MFS); major facilitator superfamily transporter 1440193 4897486 Rsph17029_1384 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001043266.1 1438973 R 349101 CDS YP_001043267.1 126462153 4897531 1440331..1440960 1 NC_009049.1 PFAM: HhH-GPD family protein; KEGG: rsp:RSP_2727 probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; HhH-GPD family protein 1440960 4897531 Rsph17029_1385 Rhodobacter sphaeroides ATCC 17029 HhH-GPD family protein YP_001043267.1 1440331 D 349101 CDS YP_001043268.1 126462154 4897593 1440957..1441619 1 NC_009049.1 PFAM: phospholipase/Carboxylesterase; KEGG: rsp:RSP_2728 phospholipase/carboxylesterase; phospholipase/carboxylesterase 1441619 4897593 Rsph17029_1386 Rhodobacter sphaeroides ATCC 17029 phospholipase/carboxylesterase YP_001043268.1 1440957 D 349101 CDS YP_001043269.1 126462155 4897577 1442087..1442671 1 NC_009049.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsp:RSP_2729 probable restriction endonuclease; HNH endonuclease 1442671 4897577 Rsph17029_1387 Rhodobacter sphaeroides ATCC 17029 HNH endonuclease YP_001043269.1 1442087 D 349101 CDS YP_001043270.1 126462156 4897631 1442964..1443290 1 NC_009049.1 PFAM: regulatory protein, ArsR; KEGG: rsp:RSP_2730 transcriptional regulator, ArsR family; regulatory protein ArsR 1443290 4897631 Rsph17029_1388 Rhodobacter sphaeroides ATCC 17029 regulatory protein ArsR YP_001043270.1 1442964 D 349101 CDS YP_001043271.1 126462157 4897623 1443283..1443576 1 NC_009049.1 hypothetical protein 1443576 4897623 Rsph17029_1389 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043271.1 1443283 D 349101 CDS YP_001043272.1 126462158 4897786 1443573..1444286 1 NC_009049.1 PFAM: NADPH-dependent FMN reductase; KEGG: rsp:RSP_2731 arsenical resistance protein, ArsH; NADPH-dependent FMN reductase 1444286 4897786 Rsph17029_1390 Rhodobacter sphaeroides ATCC 17029 NADPH-dependent FMN reductase YP_001043272.1 1443573 D 349101 CDS YP_001043273.1 126462159 4897784 1444283..1445446 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2732 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 1445446 4897784 Rsph17029_1391 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001043273.1 1444283 D 349101 CDS YP_001043274.1 126462160 4897779 1445663..1447114 1 NC_009049.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1447114 4897779 Rsph17029_1392 Rhodobacter sphaeroides ATCC 17029 glucose-6-phosphate 1-dehydrogenase YP_001043274.1 1445663 D 349101 CDS YP_001043275.1 126462161 4897851 1447153..1447824 1 NC_009049.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: rsp:RSP_2735 6-phosphogluconolactonase; 6-phosphogluconolactonase 1447824 4897851 Rsph17029_1393 Rhodobacter sphaeroides ATCC 17029 6-phosphogluconolactonase YP_001043275.1 1447153 D 349101 CDS YP_001043276.1 126462162 4897844 1447844..1449445 1 NC_009049.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1449445 pgi 4897844 pgi Rhodobacter sphaeroides ATCC 17029 glucose-6-phosphate isomerase YP_001043276.1 1447844 D 349101 CDS YP_001043277.1 126462163 4897796 complement(1449671..1450018) 1 NC_009049.1 PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_2737 putative ssRNA endoribonuclease L-PSP; endoribonuclease L-PSP 1450018 4897796 Rsph17029_1395 Rhodobacter sphaeroides ATCC 17029 endoribonuclease L-PSP YP_001043277.1 1449671 R 349101 CDS YP_001043278.1 126462164 4897915 1450339..1451286 1 NC_009049.1 PFAM: Rhodanese domain protein; KEGG: rsp:RSP_2738 probable rhodanese-related sulfurtransferase; rhodanese domain-containing protein 1451286 4897915 Rsph17029_1396 Rhodobacter sphaeroides ATCC 17029 rhodanese domain-containing protein YP_001043278.1 1450339 D 349101 CDS YP_001043279.1 126462165 4897894 1451297..1452424 1 NC_009049.1 PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: rsp:RSP_2739 hypothetical protein; hypothetical protein 1452424 4897894 Rsph17029_1397 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043279.1 1451297 D 349101 CDS YP_001043280.1 126462166 4897891 1452421..1452588 1 NC_009049.1 hypothetical protein 1452588 4897891 Rsph17029_1398 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043280.1 1452421 D 349101 CDS YP_001043281.1 126462167 4897873 1452863..1454119 1 NC_009049.1 KEGG: rsp:RSP_2740 putative glucose/sorbosone dehydrogenase; putative glucose/sorbosone dehydrogenase 1454119 4897873 Rsph17029_1399 Rhodobacter sphaeroides ATCC 17029 putative glucose/sorbosone dehydrogenase YP_001043281.1 1452863 D 349101 CDS YP_001043282.1 126462168 4897866 1454116..1454712 1 NC_009049.1 KEGG: rsp:RSP_2741 class I diheme cytochrome c4; class I diheme cytochrome c4 1454712 4897866 Rsph17029_1400 Rhodobacter sphaeroides ATCC 17029 class I diheme cytochrome c4 YP_001043282.1 1454116 D 349101 CDS YP_001043283.1 126462169 4897982 complement(1454738..1455067) 1 NC_009049.1 KEGG: rsp:RSP_6067 hypothetical protein; hypothetical protein 1455067 4897982 Rsph17029_1401 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043283.1 1454738 R 349101 CDS YP_001043284.1 126462170 4897978 1455215..1456429 1 NC_009049.1 KEGG: rsp:RSP_2742 hypothetical protein; hypothetical protein 1456429 4897978 Rsph17029_1402 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043284.1 1455215 D 349101 CDS YP_001043285.1 126462171 4898001 complement(1456463..1457230) 1 NC_009049.1 KEGG: rsp:RSP_2744 hypothetical protein; hypothetical protein 1457230 4898001 Rsph17029_1403 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043285.1 1456463 R 349101 CDS YP_001043286.1 126462172 4898007 1457396..1458364 1 NC_009049.1 KEGG: rsp:RSP_2745 hypothetical protein; hypothetical protein 1458364 4898007 Rsph17029_1404 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043286.1 1457396 D 349101 CDS YP_001043287.1 126462173 4897999 complement(1458355..1459362) 1 NC_009049.1 KEGG: rsp:RSP_2746 hypothetical protein; hypothetical protein 1459362 4897999 Rsph17029_1405 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043287.1 1458355 R 349101 CDS YP_001043288.1 126462174 4898080 complement(1459407..1460654) 1 NC_009049.1 KEGG: rsp:RSP_2747 possible glycosyltransferase; putative glycosyltransferase 1460654 4898080 Rsph17029_1406 Rhodobacter sphaeroides ATCC 17029 putative glycosyltransferase YP_001043288.1 1459407 R 349101 CDS YP_001043289.1 126462175 4898048 complement(1460970..1461365) 1 NC_009049.1 PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: rsp:RSP_2748 possible transcriptional regulator, CopG family; hypothetical protein 1461365 4898048 Rsph17029_1407 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043289.1 1460970 R 349101 CDS YP_001043290.1 126462176 4898086 1461438..1461587 1 NC_009049.1 hypothetical protein 1461587 4898086 Rsph17029_1408 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043290.1 1461438 D 349101 CDS YP_001043291.1 126462177 4897690 complement(1462238..1464259) 1 NC_009049.1 PFAM: ferredoxin; KEGG: rsp:RSP_2766 uncharacterized metal-binding protein; ferredoxin 1464259 4897690 Rsph17029_1409 Rhodobacter sphaeroides ATCC 17029 ferredoxin YP_001043291.1 1462238 R 349101 CDS YP_001043292.1 126462178 4896721 complement(1464394..1465368) 1 NC_009049.1 catalyzes the transfer of the N5-methyl group from (6S)-methyl tetrahydrofolate to the cobalt center of a corrinoid iron-sulfur protein; methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase 1465368 4896721 Rsph17029_1410 Rhodobacter sphaeroides ATCC 17029 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase YP_001043292.1 1464394 R 349101 CDS YP_001043293.1 126462179 4896087 complement(1465365..1466294) 1 NC_009049.1 KEGG: rsp:RSP_2769 probable 5,10-methylenetetrahydrofolate reductase; putative 5,10-methylenetetrahydrofolate reductase 1466294 4896087 Rsph17029_1411 Rhodobacter sphaeroides ATCC 17029 putative 5,10-methylenetetrahydrofolate reductase YP_001043293.1 1465365 R 349101 CDS YP_001043294.1 126462180 4896746 complement(1466323..1466616) 1 NC_009049.1 KEGG: rsp:RSP_2770 hypothetical protein; hypothetical protein 1466616 4896746 Rsph17029_1412 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043294.1 1466323 R 349101 CDS YP_001043295.1 126462181 4897542 1466886..1468022 1 NC_009049.1 PFAM: Ppx/GppA phosphatase; KEGG: rsp:RSP_2771 putative exopolyphosphatase; Ppx/GppA phosphatase 1468022 4897542 Rsph17029_1413 Rhodobacter sphaeroides ATCC 17029 Ppx/GppA phosphatase YP_001043295.1 1466886 D 349101 CDS YP_001043296.1 126462182 4897442 1468019..1468753 1 NC_009049.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: rsp:RSP_2772 23S rRNA methylase; ribosomal RNA methyltransferase RrmJ/FtsJ 1468753 4897442 Rsph17029_1414 Rhodobacter sphaeroides ATCC 17029 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001043296.1 1468019 D 349101 CDS YP_001043297.1 126462183 4897034 complement(1468904..1469470) 1 NC_009049.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rsp:RSP_2773 hypothetical protein; hypothetical protein 1469470 4897034 Rsph17029_1415 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043297.1 1468904 R 349101 CDS YP_001043298.1 126462184 4897244 1469759..1471399 1 NC_009049.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_2774 hypothetical protein; peptidoglycan binding domain-containing protein 1471399 4897244 Rsph17029_1416 Rhodobacter sphaeroides ATCC 17029 peptidoglycan binding domain-containing protein YP_001043298.1 1469759 D 349101 CDS YP_001043299.1 126462185 4898072 1471448..1472539 1 NC_009049.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; KEGG: rsp:RSP_2775 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1472539 4898072 Rsph17029_1417 Rhodobacter sphaeroides ATCC 17029 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_001043299.1 1471448 D 349101 CDS YP_001043300.1 126462186 4896547 1472573..1472839 1 NC_009049.1 PFAM: phosphopantetheine-binding; KEGG: rsp:RSP_2776 acyl carrier protein, AcpP; phosphopantetheine-binding protein 1472839 4896547 Rsph17029_1418 Rhodobacter sphaeroides ATCC 17029 phosphopantetheine-binding protein YP_001043300.1 1472573 D 349101 CDS YP_001043301.1 126462187 4897443 1472851..1474059 1 NC_009049.1 PFAM: beta-ketoacyl synthase; KEGG: rsp:RSP_2777 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase 1474059 4897443 Rsph17029_1419 Rhodobacter sphaeroides ATCC 17029 beta-ketoacyl synthase YP_001043301.1 1472851 D 349101 CDS YP_001043302.1 126462188 4896520 complement(1474127..1474795) 1 NC_009049.1 PFAM: Invasion associated locus B family protein; KEGG: rsp:RSP_2778 hypothetical protein; invasion associated locus B family protein 1474795 4896520 Rsph17029_1420 Rhodobacter sphaeroides ATCC 17029 invasion associated locus B family protein YP_001043302.1 1474127 R 349101 CDS YP_001043303.1 126462189 4897116 complement(1475330..1476796) 1 NC_009049.1 PFAM: Catalase domain protein; KEGG: rsp:RSP_2779 catalase; catalase 1476796 4897116 Rsph17029_1421 Rhodobacter sphaeroides ATCC 17029 catalase YP_001043303.1 1475330 R 349101 CDS YP_001043304.1 126462190 4895679 1476898..1477824 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2780 transcriptional regulator, OxyR, LysR family; LysR family transcriptional regulator 1477824 4895679 Rsph17029_1422 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001043304.1 1476898 D 349101 CDS YP_001043305.1 126462191 4897448 complement(1477853..1478401) 1 NC_009049.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_2781 peroxiredoxin/glutaredoxin family protein; redoxin domain-containing protein 1478401 4897448 Rsph17029_1423 Rhodobacter sphaeroides ATCC 17029 redoxin domain-containing protein YP_001043305.1 1477853 R 349101 CDS YP_001043306.1 126462192 4897548 complement(1478563..1479294) 1 NC_009049.1 TIGRFAM: MIP family channel proteins; PFAM: major intrinsic protein; KEGG: rsp:RSP_2782 aquaporin z, major intrinsic protein (MIP) family; MIP family channel protein 1479294 4897548 Rsph17029_1424 Rhodobacter sphaeroides ATCC 17029 MIP family channel protein YP_001043306.1 1478563 R 349101 CDS YP_001043307.1 126462193 4897650 1479431..1480393 1 NC_009049.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1480393 4897650 Rsph17029_1425 Rhodobacter sphaeroides ATCC 17029 lipoyl synthase YP_001043307.1 1479431 D 349101 CDS YP_001043308.1 126462194 4897057 complement(1480466..1481356) 1 NC_009049.1 KEGG: rsp:RSP_2784 diheme class I cytochrome c; diheme class I cytochrome c 1481356 4897057 Rsph17029_1426 Rhodobacter sphaeroides ATCC 17029 diheme class I cytochrome c YP_001043308.1 1480466 R 349101 CDS YP_001043309.1 126462195 4897459 complement(1481360..1481821) 1 NC_009049.1 PFAM: cytochrome c, class II; KEGG: rsp:RSP_2785 cytochrome c-554; cytochrome c, class II 1481821 4897459 Rsph17029_1427 Rhodobacter sphaeroides ATCC 17029 cytochrome c, class II YP_001043309.1 1481360 R 349101 CDS YP_001043310.1 126462196 4897571 complement(1482228..1482773) 1 NC_009049.1 KEGG: rsp:RSP_2786 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1482773 4897571 Rsph17029_1428 Rhodobacter sphaeroides ATCC 17029 hypoxanthine phosphoribosyltransferase YP_001043310.1 1482228 R 349101 CDS YP_001043311.1 126462197 4897288 1482865..1483317 1 NC_009049.1 PFAM: cyclase/dehydrase; KEGG: rsp:RSP_2787 hypothetical protein; cyclase/dehydrase 1483317 4897288 Rsph17029_1429 Rhodobacter sphaeroides ATCC 17029 cyclase/dehydrase YP_001043311.1 1482865 D 349101 CDS YP_001043312.1 126462198 4897396 1483749..1484459 1 NC_009049.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: rsp:RSP_2864 pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 1484459 4897396 Rsph17029_1430 Rhodobacter sphaeroides ATCC 17029 ribulose-phosphate 3-epimerase YP_001043312.1 1483749 D 349101 CDS YP_001043313.1 126462199 4897647 complement(1484541..1485725) 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2862 glycine/D-amino acid oxidase (deaminating); FAD dependent oxidoreductase 1485725 4897647 Rsph17029_1431 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001043313.1 1484541 R 349101 CDS YP_001043314.1 126462200 4897055 complement(1486113..1487009) 1 NC_009049.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1487009 tsf 4897055 tsf Rhodobacter sphaeroides ATCC 17029 elongation factor Ts YP_001043314.1 1486113 R 349101 CDS YP_001043315.1 126462201 4898083 complement(1487091..1487846) 1 NC_009049.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1487846 rpsB 4898083 rpsB Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S2 YP_001043315.1 1487091 R 349101 CDS YP_001043316.1 126462202 4895207 1488101..1488988 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_6216 putative carbohydrate kinase, PfkB family; ribokinase-like domain-containing protein 1488988 4895207 Rsph17029_1434 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001043316.1 1488101 D 349101 CDS YP_001043317.1 126462203 4897282 1488985..1489896 1 NC_009049.1 PFAM: Indigoidine synthase A family protein; KEGG: rsp:RSP_2858 IndA involved in pigment biosynthesis; indigoidine synthase A family protein 1489896 4897282 Rsph17029_1435 Rhodobacter sphaeroides ATCC 17029 indigoidine synthase A family protein YP_001043317.1 1488985 D 349101 CDS YP_001043318.1 126462204 4895853 complement(1489923..1490696) 1 NC_009049.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_2857 D-beta-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase 1490696 4895853 Rsph17029_1436 Rhodobacter sphaeroides ATCC 17029 3-hydroxybutyrate dehydrogenase YP_001043318.1 1489923 R 349101 CDS YP_001043319.1 126462205 4896444 1490987..1492798 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_2856 putative oligopeptide ABC transporter, periplasmic-binding protein; extracellular solute-binding protein 1492798 4896444 Rsph17029_1437 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043319.1 1490987 D 349101 CDS YP_001043320.1 126462206 4898029 complement(1493022..1496288) 1 NC_009049.1 PFAM: acriflavin resistance protein; KEGG: rsp:RSP_2855 cation/multidrug efflux pump, RND superfamily; acriflavin resistance protein 1496288 4898029 Rsph17029_1438 Rhodobacter sphaeroides ATCC 17029 acriflavin resistance protein YP_001043320.1 1493022 R 349101 CDS YP_001043321.1 126462207 4895537 complement(1496299..1497471) 1 NC_009049.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2854 cation/multidrug efflux pump, membrane fusion protein (MFP) family; RND family efflux transporter MFP subunit 1497471 4895537 Rsph17029_1439 Rhodobacter sphaeroides ATCC 17029 RND family efflux transporter MFP subunit YP_001043321.1 1496299 R 349101 CDS YP_001043322.1 126462208 4895872 complement(1497459..1498100) 1 NC_009049.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_2853 transcriptional regulator, TetR family; TetR family transcriptional regulator 1498100 4895872 Rsph17029_1440 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001043322.1 1497459 R 349101 CDS YP_001043323.1 126462209 4896421 1498299..1498943 1 NC_009049.1 PFAM: DSBA oxidoreductase; KEGG: rsp:RSP_2852 predicted polyketide biosynthesis associated protein; DSBA oxidoreductase 1498943 4896421 Rsph17029_1441 Rhodobacter sphaeroides ATCC 17029 DSBA oxidoreductase YP_001043323.1 1498299 D 349101 CDS YP_001043324.1 126462210 4896115 1498940..1500157 1 NC_009049.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2851 multidrug (bicyclomycin) efflux pump, major facilitator superfamily (MFS); Bcr/CflA subfamily drug resistance transporter 1500157 4896115 Rsph17029_1442 Rhodobacter sphaeroides ATCC 17029 Bcr/CflA subfamily drug resistance transporter YP_001043324.1 1498940 D 349101 CDS YP_001043325.1 126462211 4897023 complement(1500420..1503917) 1 NC_009049.1 KEGG: rsp:RSP_2850 transcription-repair coupling factor (helicase); TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor 1503917 4897023 Rsph17029_1443 Rhodobacter sphaeroides ATCC 17029 transcription-repair coupling factor YP_001043325.1 1500420 R 349101 CDS YP_001043326.1 126462212 4896868 complement(1503995..1504561) 1 NC_009049.1 KEGG: rsp:RSP_2849 hypothetical membrane protein; hypothetical protein 1504561 4896868 Rsph17029_1444 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043326.1 1503995 R 349101 CDS YP_001043327.1 126462213 4897260 1504654..1505658 1 NC_009049.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1505658 4897260 Rsph17029_1445 Rhodobacter sphaeroides ATCC 17029 delta-aminolevulinic acid dehydratase YP_001043327.1 1504654 D 349101 CDS YP_001043328.1 126462214 4898036 1505785..1506342 1 NC_009049.1 KEGG: rsp:RSP_2847 hypothetical protein; hypothetical protein 1506342 4898036 Rsph17029_1446 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043328.1 1505785 D 349101 CDS YP_001043329.1 126462215 4897561 complement(1506545..1507411) 1 NC_009049.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rsp:RSP_2846 putative 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 1507411 4897561 Rsph17029_1447 Rhodobacter sphaeroides ATCC 17029 6-phosphogluconate dehydrogenase YP_001043329.1 1506545 R 349101 CDS YP_001043330.1 126462216 4895453 1507488..1509959 1 NC_009049.1 PFAM: peptidase S45, penicillin amidase; KEGG: rsp:RSP_2845 putative penicillin acylase (penicillin amidase); penicillin amidase 1509959 4895453 Rsph17029_1448 Rhodobacter sphaeroides ATCC 17029 penicillin amidase YP_001043330.1 1507488 D 349101 CDS YP_001043331.1 126462217 4895659 complement(1510014..1510196) 1 NC_009049.1 hypothetical protein 1510196 4895659 Rsph17029_1449 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043331.1 1510014 R 349101 CDS YP_001043332.1 126462218 4895627 complement(1510423..1511766) 1 NC_009049.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; KEGG: rsp:RSP_2844 putative GTP-binding protein; small GTP-binding protein 1511766 4895627 Rsph17029_1450 Rhodobacter sphaeroides ATCC 17029 small GTP-binding protein YP_001043332.1 1510423 R 349101 CDS YP_001043333.1 126462219 4897585 complement(1511768..1512001) 1 NC_009049.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1512001 hfq 4897585 hfq Rhodobacter sphaeroides ATCC 17029 RNA-binding protein Hfq YP_001043333.1 1511768 R 349101 CDS YP_001043334.1 126462220 4897086 complement(1512159..1513670) 1 NC_009049.1 PFAM: cation transporter; KEGG: rsp:RSP_2842 potassium uptake transporter, transmembrane subunit, TrkH; cation transporter 1513670 4897086 Rsph17029_1452 Rhodobacter sphaeroides ATCC 17029 cation transporter YP_001043334.1 1512159 R 349101 CDS YP_001043335.1 126462221 4895562 complement(1513672..1515048) 1 NC_009049.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1515048 trkA 4895562 trkA Rhodobacter sphaeroides ATCC 17029 potassium transporter peripheral membrane protein YP_001043335.1 1513672 R 349101 CDS YP_001043336.1 126462222 4896498 complement(1515103..1516533) 1 NC_009049.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_2840 nitrogen assimilation transcriptional regulator, NtrX; two component, sigma54 specific, Fis family transcriptional regulator 1516533 4896498 Rsph17029_1454 Rhodobacter sphaeroides ATCC 17029 two component, sigma54 specific, Fis family transcriptional regulator YP_001043336.1 1515103 R 349101 CDS YP_001043337.1 126462223 4897186 complement(1516530..1518791) 1 NC_009049.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rsp:RSP_2839 nitrogen regulation protein, NtrY, signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1518791 4897186 Rsph17029_1455 Rhodobacter sphaeroides ATCC 17029 multi-sensor signal transduction histidine kinase YP_001043337.1 1516530 R 349101 CDS YP_001043338.1 126462224 4896918 complement(1518891..1520258) 1 NC_009049.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_2838 nitrogen metabolism transcriptional regulator, NtrC; two component, sigma54 specific, Fis family transcriptional regulator 1520258 4896918 Rsph17029_1456 Rhodobacter sphaeroides ATCC 17029 two component, sigma54 specific, Fis family transcriptional regulator YP_001043338.1 1518891 R 349101 CDS YP_001043339.1 126462225 4898069 complement(1520258..1521364) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: rsp:RSP_2837 nitrogen regulation protein, NtrB signal transduction histidine kinase; signal transduction histidine kinase, nitrogen specific, NtrB 1521364 4898069 Rsph17029_1457 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase, nitrogen specific, NtrB YP_001043339.1 1520258 R 349101 CDS YP_001043340.1 126462226 4896454 complement(1521361..1522341) 1 NC_009049.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: rsp:RSP_2836 tRNA-dihydrouridine synthase, nifR3; nifR3 family TIM-barrel protein 1522341 4896454 Rsph17029_1458 Rhodobacter sphaeroides ATCC 17029 nifR3 family TIM-barrel protein YP_001043340.1 1521361 R 349101 CDS YP_001043341.1 126462227 4896161 1522555..1523232 1 NC_009049.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rsp:RSP_2835 probable 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (YgbP); 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1523232 4896161 Rsph17029_1459 Rhodobacter sphaeroides ATCC 17029 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001043341.1 1522555 D 349101 CDS YP_001043342.1 126462228 4896911 1523341..1523820 1 NC_009049.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1523820 ispF 4896911 ispF Rhodobacter sphaeroides ATCC 17029 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_001043342.1 1523341 D 349101 CDS YP_001043343.1 126462229 4897496 1523817..1524314 1 NC_009049.1 PFAM: phosphatidylglycerophosphatase A; KEGG: rsp:RSP_2834 putative phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 1524314 4897496 Rsph17029_1461 Rhodobacter sphaeroides ATCC 17029 phosphatidylglycerophosphatase A YP_001043343.1 1523817 D 349101 CDS YP_001043344.1 126462230 4897324 1524311..1524796 1 NC_009049.1 PFAM: CinA domain protein; KEGG: rsp:RSP_2833 putative competence-damaged inducible protein; CinA domain-containing protein 1524796 4897324 Rsph17029_1462 Rhodobacter sphaeroides ATCC 17029 CinA domain-containing protein YP_001043344.1 1524311 D 349101 CDS YP_001043345.1 126462231 4897567 complement(1524826..1526004) 1 NC_009049.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_2832 predicted conserved flavoprotein; hypothetical protein 1526004 4897567 Rsph17029_1463 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043345.1 1524826 R 349101 CDS YP_001043346.1 126462232 4897802 complement(1526342..1526950) 1 NC_009049.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1526950 4897802 Rsph17029_1464 Rhodobacter sphaeroides ATCC 17029 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_001043346.1 1526342 R 349101 CDS YP_001043347.1 126462233 4898082 complement(1526947..1528176) 1 NC_009049.1 PFAM: NnrS family protein; KEGG: rsp:RSP_2830 hypothetical protein; NnrS family protein 1528176 4898082 Rsph17029_1465 Rhodobacter sphaeroides ATCC 17029 NnrS family protein YP_001043347.1 1526947 R 349101 CDS YP_001043348.1 126462234 4897347 1528584..1528943 1 NC_009049.1 PFAM: protein of unknown function DUF1636; KEGG: rsp:RSP_2829 hypothetical protein; hypothetical protein 1528943 4897347 Rsph17029_1466 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043348.1 1528584 D 349101 CDS YP_001043349.1 126462235 4896622 1528940..1529977 1 NC_009049.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rsp:RSP_2828 cobalamin synthesis protein CobW; cobalamin biosynthesis protein CobW 1529977 4896622 Rsph17029_1467 Rhodobacter sphaeroides ATCC 17029 cobalamin biosynthesis protein CobW YP_001043349.1 1528940 D 349101 CDS YP_001043350.1 126462236 4897625 1529981..1533217 1 NC_009049.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1533217 cobN 4897625 cobN Rhodobacter sphaeroides ATCC 17029 cobaltochelatase subunit CobN YP_001043350.1 1529981 D 349101 CDS YP_001043351.1 126462237 4897250 1533217..1533846 1 NC_009049.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 1533846 cobH 4897250 cobH Rhodobacter sphaeroides ATCC 17029 precorrin-8X methylmutase YP_001043351.1 1533217 D 349101 CDS YP_001043352.1 126462238 4896058 1533846..1534577 1 NC_009049.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2826 putative precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 1534577 4896058 Rsph17029_1470 Rhodobacter sphaeroides ATCC 17029 precorrin-2 C(20)-methyltransferase YP_001043352.1 1533846 D 349101 CDS YP_001043353.1 126462239 4895681 1534574..1535308 1 NC_009049.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2824 putative precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 1535308 4895681 Rsph17029_1471 Rhodobacter sphaeroides ATCC 17029 precorrin-3B C(17)-methyltransferase YP_001043353.1 1534574 D 349101 CDS YP_001043354.1 126462240 4897514 complement(1535284..1536027) 1 NC_009049.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1536027 4897514 Rsph17029_1472 Rhodobacter sphaeroides ATCC 17029 cobalt-precorrin-6x reductase YP_001043354.1 1535284 R 349101 CDS YP_001043355.1 126462241 4897500 1536026..1537189 1 NC_009049.1 KEGG: rsp:RSP_2823 putative precorrin-6y C5,15-methyltransferase; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6Y C5,15-methyltransferase subunit CbiT 1537189 4897500 Rsph17029_1473 Rhodobacter sphaeroides ATCC 17029 precorrin-6Y C5,15-methyltransferase subunit CbiT YP_001043355.1 1536026 D 349101 CDS YP_001043356.1 126462242 4895922 1537186..1537560 1 NC_009049.1 KEGG: rsp:RSP_2822 putative precorrin methylase; putative precorrin methylase 1537560 4895922 Rsph17029_1474 Rhodobacter sphaeroides ATCC 17029 putative precorrin methylase YP_001043356.1 1537186 D 349101 CDS YP_001043357.1 126462243 4895912 1537557..1538339 1 NC_009049.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2821 putative precorrin-4 C11-methyltransferase; precorrin-4 C(11)-methyltransferase 1538339 4895912 Rsph17029_1475 Rhodobacter sphaeroides ATCC 17029 precorrin-4 C(11)-methyltransferase YP_001043357.1 1537557 D 349101 CDS YP_001043358.1 126462244 4896546 1538336..1539061 1 NC_009049.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 1539061 4896546 Rsph17029_1476 Rhodobacter sphaeroides ATCC 17029 uroporphyrin-III C-methyltransferase YP_001043358.1 1538336 D 349101 CDS YP_001043359.1 126462245 4897203 1539152..1539916 1 NC_009049.1 catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 1539916 4897203 Rsph17029_1477 Rhodobacter sphaeroides ATCC 17029 precorrin 6A synthase YP_001043359.1 1539152 D 349101 CDS YP_001043360.1 126462246 4895071 complement(1540363..1541475) 1 NC_009049.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1541475 aroB 4895071 aroB Rhodobacter sphaeroides ATCC 17029 3-dehydroquinate synthase YP_001043360.1 1540363 R 349101 CDS YP_001043361.1 126462247 4898089 complement(1541472..1542053) 1 NC_009049.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 1542053 4898089 Rsph17029_1479 Rhodobacter sphaeroides ATCC 17029 shikimate kinase YP_001043361.1 1541472 R 349101 CDS YP_001043362.1 126462248 4897962 1542330..1543898 1 NC_009049.1 KEGG: rsp:RSP_2816 hypothetical protein; hypothetical protein 1543898 4897962 Rsph17029_1480 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043362.1 1542330 D 349101 CDS YP_001043363.1 126462249 4897925 1543898..1544833 1 NC_009049.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: rsp:RSP_2815 probable integrase/recombinase XerD; phage integrase family protein 1544833 4897925 Rsph17029_1481 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001043363.1 1543898 D 349101 CDS YP_001043364.1 126462250 4897831 1544902..1546230 1 NC_009049.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rsp:RSP_2814 hypothetical protein with CBS domain; hypothetical protein 1546230 4897831 Rsph17029_1482 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043364.1 1544902 D 349101 CDS YP_001043365.1 126462251 4897723 complement(1546200..1547336) 1 NC_009049.1 KEGG: rsp:RSP_6073 hypothetical protein; hypothetical protein 1547336 4897723 Rsph17029_1483 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043365.1 1546200 R 349101 CDS YP_001043366.1 126462252 4897453 1547554..1547931 1 NC_009049.1 KEGG: rsp:RSP_6226 hypothetical protein; hypothetical protein 1547931 4897453 Rsph17029_1484 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043366.1 1547554 D 349101 CDS YP_001043367.1 126462253 4897111 complement(1548068..1549609) 1 NC_009049.1 PFAM: trimethylamine methyltransferase; KEGG: rsp:RSP_2813 putative trimethylamine methyltransferase protein; trimethylamine methyltransferase 1549609 4897111 Rsph17029_1485 Rhodobacter sphaeroides ATCC 17029 trimethylamine methyltransferase YP_001043367.1 1548068 R 349101 CDS YP_001043368.1 126462254 4896891 complement(1549725..1550330) 1 NC_009049.1 KEGG: rsp:RSP_2812 hypothetical protein; hypothetical protein 1550330 4896891 Rsph17029_1486 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043368.1 1549725 R 349101 CDS YP_001043369.1 126462255 4896645 complement(1550333..1551298) 1 NC_009049.1 PFAM: Mammalian cell entry related domain protein; KEGG: rsp:RSP_2811 putative ABC transporter, periplasmic substrate-binding protein; hypothetical protein 1551298 4896645 Rsph17029_1487 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043369.1 1550333 R 349101 CDS YP_001043370.1 126462256 4896292 complement(1551302..1552075) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2810 ABC transporter, ATPase subunit; ABC transporter 1552075 4896292 Rsph17029_1488 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043370.1 1551302 R 349101 CDS YP_001043371.1 126462257 4895852 complement(1552075..1553175) 1 NC_009049.1 PFAM: protein of unknown function DUF140; KEGG: rsp:RSP_2809 ABC transporter, inner membrane subunit; hypothetical protein 1553175 4895852 Rsph17029_1489 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043371.1 1552075 R 349101 CDS YP_001043372.1 126462258 4895527 1553678..1553932 1 NC_009049.1 KEGG: rsp:RSP_2808 hypothetical protein; hypothetical protein 1553932 4895527 Rsph17029_1490 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043372.1 1553678 D 349101 CDS YP_001043373.1 126462259 4895542 1553937..1554485 1 NC_009049.1 PFAM: cytochrome B561; KEGG: rsp:RSP_2807 putative cytochrome b; cytochrome B561 1554485 4895542 Rsph17029_1491 Rhodobacter sphaeroides ATCC 17029 cytochrome B561 YP_001043373.1 1553937 D 349101 CDS YP_001043374.1 126462260 4895415 1554676..1555080 1 NC_009049.1 PFAM: phage integrase family protein; KEGG: sit:TM1040_0776 phage integrase; phage integrase family protein 1555080 4895415 Rsph17029_1492 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001043374.1 1554676 D 349101 CDS YP_001043375.1 126462261 4897187 complement(1555642..1558050) 1 NC_009049.1 KEGG: rsp:RSP_2806 probable ATP-dependent protease La protein; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1558050 4897187 Rsph17029_1493 Rhodobacter sphaeroides ATCC 17029 ATP-dependent protease La YP_001043375.1 1555642 R 349101 CDS YP_001043376.1 126462262 4897860 complement(1558313..1559401) 1 NC_009049.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rsp:RSP_2805 putative NADH-flavin oxidoreductase; NADH:flavin oxidoreductase 1559401 4897860 Rsph17029_1494 Rhodobacter sphaeroides ATCC 17029 NADH:flavin oxidoreductase YP_001043376.1 1558313 R 349101 CDS YP_001043377.1 126462263 4897563 complement(1559508..1560638) 1 NC_009049.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1560638 tgt 4897563 tgt Rhodobacter sphaeroides ATCC 17029 queuine tRNA-ribosyltransferase YP_001043377.1 1559508 R 349101 CDS YP_001043378.1 126462264 4897013 complement(1560804..1563881) 1 NC_009049.1 PFAM: acriflavin resistance protein; KEGG: rsp:RSP_2803 multidrug/cation efflux pump, RND superfamily; acriflavin resistance protein 1563881 4897013 Rsph17029_1496 Rhodobacter sphaeroides ATCC 17029 acriflavin resistance protein YP_001043378.1 1560804 R 349101 CDS YP_001043379.1 126462265 4895091 complement(1563889..1565064) 1 NC_009049.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2802 multidrug/cation efflux pump, membrane fusion protein subunit; RND family efflux transporter MFP subunit 1565064 4895091 Rsph17029_1497 Rhodobacter sphaeroides ATCC 17029 RND family efflux transporter MFP subunit YP_001043379.1 1563889 R 349101 CDS YP_001043380.1 126462266 4897510 1565210..1565779 1 NC_009049.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_2801 transcriptional regulator, TetR family; TetR family transcriptional regulator 1565779 4897510 Rsph17029_1498 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001043380.1 1565210 D 349101 CDS YP_001043381.1 126462267 4897932 1566357..1566830 1 NC_009049.1 KEGG: rsp:RSP_6075 hypothetical protein; hypothetical protein 1566830 4897932 Rsph17029_1499 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043381.1 1566357 D 349101 CDS YP_001043382.1 126462268 4897798 1566875..1568812 1 NC_009049.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_2800 putative AcoR, transcriptional activator of acetoin/glycerol metabolism; Fis family GAF modulated sigma54 specific transcriptional regulator 1568812 4897798 Rsph17029_1500 Rhodobacter sphaeroides ATCC 17029 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001043382.1 1566875 D 349101 CDS YP_001043383.1 126462269 4895260 complement(1568854..1569948) 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_2799 putative zinc-containing alcohol dehydrogenase; alcohol dehydrogenase 1569948 4895260 Rsph17029_1501 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001043383.1 1568854 R 349101 CDS YP_001043384.1 126462270 4895748 complement(1569999..1571630) 1 NC_009049.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 1571630 groEL 4895748 groEL Rhodobacter sphaeroides ATCC 17029 chaperonin GroEL YP_001043384.1 1569999 R 349101 CDS YP_001043385.1 126462271 4896268 complement(1571714..1572514) 1 NC_009049.1 PFAM: protein of unknown function DUF59; KEGG: rsp:RSP_2797 hypothetical protein of unknown function; hypothetical protein 1572514 4896268 Rsph17029_1503 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043385.1 1571714 R 349101 CDS YP_001043386.1 126462272 4896897 complement(1572519..1573541) 1 NC_009049.1 PFAM: amidohydrolase 2; KEGG: rsp:RSP_2796 hypothetical protein; amidohydrolase 2 1573541 4896897 Rsph17029_1504 Rhodobacter sphaeroides ATCC 17029 amidohydrolase 2 YP_001043386.1 1572519 R 349101 CDS YP_001043387.1 126462273 4895317 complement(1573602..1573970) 1 NC_009049.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: rsp:RSP_2795 putative regulatory protein of multicomponent monooxygenase; monooxygenase component MmoB/DmpM 1573970 4895317 Rsph17029_1505 Rhodobacter sphaeroides ATCC 17029 monooxygenase component MmoB/DmpM YP_001043387.1 1573602 R 349101 CDS YP_001043388.1 126462274 4895470 complement(1573982..1575040) 1 NC_009049.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: rsp:RSP_2794 putative monooxygenase beta subunit; methane/phenol/toluene hydroxylase 1575040 4895470 Rsph17029_1506 Rhodobacter sphaeroides ATCC 17029 methane/phenol/toluene hydroxylase YP_001043388.1 1573982 R 349101 CDS YP_001043389.1 126462275 4895560 complement(1575071..1576168) 1 NC_009049.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rsp:RSP_2793 putative reductase component of monooxygenase; oxidoreductase FAD/NAD(P)-binding subunit 1576168 4895560 Rsph17029_1507 Rhodobacter sphaeroides ATCC 17029 oxidoreductase FAD/NAD(P)-binding subunit YP_001043389.1 1575071 R 349101 CDS YP_001043390.1 126462276 4895355 complement(1576239..1577906) 1 NC_009049.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: rsp:RSP_2792 putative monooxygenase alpha subunit; methane monooxygenase 1577906 4895355 Rsph17029_1508 Rhodobacter sphaeroides ATCC 17029 methane monooxygenase YP_001043390.1 1576239 R 349101 CDS YP_001043391.1 126462277 4897470 1578528..1578992 1 NC_009049.1 KEGG: rsp:RSP_2791 hypothetical protein; hypothetical protein 1578992 4897470 Rsph17029_1509 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043391.1 1578528 D 349101 CDS YP_001043392.1 126462278 4897372 1578989..1579210 1 NC_009049.1 KEGG: rsp:RSP_2790 hypothetical protein; hypothetical protein 1579210 4897372 Rsph17029_1510 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043392.1 1578989 D 349101 CDS YP_001043393.1 126462279 4897828 1579207..1580292 1 NC_009049.1 KEGG: rsp:RSP_2789 hypothetical protein; hypothetical protein 1580292 4897828 Rsph17029_1511 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043393.1 1579207 D 349101 CDS YP_001043394.1 126462280 4897748 1580322..1580513 1 NC_009049.1 KEGG: rsp:RSP_6076 hypothetical protein; hypothetical protein 1580513 4897748 Rsph17029_1512 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043394.1 1580322 D 349101 CDS YP_001043395.1 126462281 4897128 1580533..1581807 1 NC_009049.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_2867 sigma-54 factor family protein; RNA polymerase sigma 54 subunit RpoN 1581807 4897128 Rsph17029_1513 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma 54 subunit RpoN YP_001043395.1 1580533 D 349101 CDS YP_001043396.1 126462282 4897906 complement(1581968..1583416) 1 NC_009049.1 KEGG: rsp:RSP_2868 putative inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 1583416 4897906 Rsph17029_1514 Rhodobacter sphaeroides ATCC 17029 inosine-5'-monophosphate dehydrogenase YP_001043396.1 1581968 R 349101 CDS YP_001043397.1 126462283 4897029 complement(1583612..1584586) 1 NC_009049.1 KEGG: rsp:RSP_2869 possible tellurite resistance protein; putative tellurite resistance protein 1584586 4897029 Rsph17029_1515 Rhodobacter sphaeroides ATCC 17029 putative tellurite resistance protein YP_001043397.1 1583612 R 349101 CDS YP_001043398.1 126462284 4896948 complement(1585116..1586225) 1 NC_009049.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_2870 ABC alpha-glucoside transporter, ATPase subunit AglK; ABC transporter 1586225 4896948 Rsph17029_1516 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043398.1 1585116 R 349101 CDS YP_001043399.1 126462285 4896073 complement(1586250..1587371) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2871 ABC alpha-glucoside transporter, inner membrane subunit AglG; binding-protein-dependent transport system inner membrane protein 1587371 4896073 Rsph17029_1517 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043399.1 1586250 R 349101 CDS YP_001043400.1 126462286 4896101 complement(1587371..1588363) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2872 ABC alpha-glucoside transporter, inner membrane subunit AglF; binding-protein-dependent transport system inner membrane protein 1588363 4896101 Rsph17029_1518 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043400.1 1587371 R 349101 CDS YP_001043401.1 126462287 4895416 complement(1588440..1589792) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2873 ABC alpha-glucoside transporter, perplasmic substrate-binding protein; extracellular solute-binding protein 1589792 4895416 Rsph17029_1519 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043401.1 1588440 R 349101 CDS YP_001043402.1 126462288 4897834 1590131..1591453 1 NC_009049.1 PFAM: glycoside hydrolase, family 1; KEGG: rsp:RSP_2874 putative beta-glucosidase A; Beta-glucosidase 1591453 4897834 Rsph17029_1520 Rhodobacter sphaeroides ATCC 17029 Beta-glucosidase YP_001043402.1 1590131 D 349101 CDS YP_001043403.1 126462289 4895278 1591472..1592425 1 NC_009049.1 PFAM: Glucokinase; KEGG: rsp:RSP_2875 putative glucokinase; glucokinase 1592425 4895278 Rsph17029_1521 Rhodobacter sphaeroides ATCC 17029 glucokinase YP_001043403.1 1591472 D 349101 CDS YP_001043404.1 126462290 4896492 complement(1592616..1593401) 1 NC_009049.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rsp:RSP_2876 putative carbon monoxide dehydrogenase medium chain; molybdopterin dehydrogenase 1593401 4896492 Rsph17029_1522 Rhodobacter sphaeroides ATCC 17029 molybdopterin dehydrogenase YP_001043404.1 1592616 R 349101 CDS YP_001043405.1 126462291 4896716 complement(1593412..1595784) 1 NC_009049.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_2877 putative carbon monoxide dehydrogenase large chain; carbon monoxide dehydrogenase 1595784 4896716 Rsph17029_1523 Rhodobacter sphaeroides ATCC 17029 carbon monoxide dehydrogenase YP_001043405.1 1593412 R 349101 CDS YP_001043406.1 126462292 4897058 complement(1595813..1596295) 1 NC_009049.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rsp:RSP_2878 putative carbon-monoxide dehydrogenase small chain; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1596295 4897058 Rsph17029_1524 Rhodobacter sphaeroides ATCC 17029 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001043406.1 1595813 R 349101 CDS YP_001043407.1 126462293 4897097 complement(1596324..1596854) 1 NC_009049.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rsp:RSP_2879 hypothetical protein; carbon monoxide dehydrogenase subunit G 1596854 4897097 Rsph17029_1525 Rhodobacter sphaeroides ATCC 17029 carbon monoxide dehydrogenase subunit G YP_001043407.1 1596324 R 349101 CDS YP_001043408.1 126462294 4897777 complement(1596987..1599188) 1 NC_009049.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_2880 signal transduction histidine kinase; PAS/PAC sensor hybrid histidine kinase 1599188 4897777 Rsph17029_1526 Rhodobacter sphaeroides ATCC 17029 PAS/PAC sensor hybrid histidine kinase YP_001043408.1 1596987 R 349101 CDS YP_001043409.1 126462295 4897959 complement(1599259..1600431) 1 NC_009049.1 PFAM: domain of unknown function DUF1745; KEGG: rsp:RSP_2881 hypothetical protein; hypothetical protein 1600431 4897959 Rsph17029_1527 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043409.1 1599259 R 349101 CDS YP_001043410.1 126462296 4897211 complement(1600529..1601209) 1 NC_009049.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_2882 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1601209 4897211 Rsph17029_1528 Rhodobacter sphaeroides ATCC 17029 two component LuxR family transcriptional regulator YP_001043410.1 1600529 R 349101 CDS YP_001043411.1 126462297 4897379 complement(1601528..1603162) 1 NC_009049.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1603162 4897379 Rsph17029_1529 Rhodobacter sphaeroides ATCC 17029 phosphoglucomutase YP_001043411.1 1601528 R 349101 CDS YP_001043412.1 126462298 4897475 complement(1603159..1605273) 1 NC_009049.1 KEGG: rsp:RSP_2884 glycogen debranching enzyme; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 1605273 4897475 Rsph17029_1530 Rhodobacter sphaeroides ATCC 17029 glycogen debranching protein GlgX YP_001043412.1 1603159 R 349101 CDS YP_001043413.1 126462299 4895323 complement(1605270..1606724) 1 NC_009049.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 1606724 glgA 4895323 glgA Rhodobacter sphaeroides ATCC 17029 glycogen synthase YP_001043413.1 1605270 R 349101 CDS YP_001043414.1 126462300 4895535 complement(1606821..1608092) 1 NC_009049.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 1608092 glgC 4895535 glgC Rhodobacter sphaeroides ATCC 17029 glucose-1-phosphate adenylyltransferase YP_001043414.1 1606821 R 349101 CDS YP_001043415.1 126462301 4895357 complement(1608863..1611268) 1 NC_009049.1 KEGG: rsp:RSP_2887 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 1611268 4895357 Rsph17029_1533 Rhodobacter sphaeroides ATCC 17029 glycogen/starch/alpha-glucan phosphorylase YP_001043415.1 1608863 R 349101 CDS YP_001043416.1 126462302 4895483 1611782..1612216 1 NC_009049.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rsp:RSP_2888 transcriptional regulator; BadM/Rrf2 family transcriptional regulator 1612216 4895483 Rsph17029_1534 Rhodobacter sphaeroides ATCC 17029 BadM/Rrf2 family transcriptional regulator YP_001043416.1 1611782 D 349101 CDS YP_001043417.1 126462303 4896681 complement(1612242..1612655) 1 NC_009049.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2889 transcriptional regulator; MerR family transcriptional regulator 1612655 4896681 Rsph17029_1535 Rhodobacter sphaeroides ATCC 17029 MerR family transcriptional regulator YP_001043417.1 1612242 R 349101 CDS YP_001043418.1 126462304 4897685 complement(1612814..1615255) 1 NC_009049.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_2890 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 1615255 4897685 Rsph17029_1536 Rhodobacter sphaeroides ATCC 17029 heavy metal translocating P-type ATPase YP_001043418.1 1612814 R 349101 CDS YP_001043419.1 126462305 4895295 1615406..1615606 1 NC_009049.1 PFAM: Heavy metal transport/detoxification protein; KEGG: rsp:RSP_2891 putative copper chaperone; heavy metal transport/detoxification protein 1615606 4895295 Rsph17029_1537 Rhodobacter sphaeroides ATCC 17029 heavy metal transport/detoxification protein YP_001043419.1 1615406 D 349101 CDS YP_001043420.1 126462306 4897772 complement(1616538..1616960) 1 NC_009049.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1616960 ndk 4897772 ndk Rhodobacter sphaeroides ATCC 17029 nucleoside diphosphate kinase YP_001043420.1 1616538 R 349101 CDS YP_001043421.1 126462307 4896293 1617088..1618935 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2895 putative ABC transporter, fused ATPase subunits; ABC transporter 1618935 4896293 Rsph17029_1539 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043421.1 1617088 D 349101 CDS YP_001043422.1 126462308 4896872 1618939..1619559 1 NC_009049.1 PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: rsp:RSP_2896 multiple antibiotic transporter; multiple antibiotic resistance (MarC)-like proteins 1619559 4896872 Rsph17029_1540 Rhodobacter sphaeroides ATCC 17029 multiple antibiotic resistance (MarC)-like proteins YP_001043422.1 1618939 D 349101 CDS YP_001043423.1 126462309 4896361 1619657..1620232 1 NC_009049.1 KEGG: rsp:RSP_2897 hypothetical protein; hypothetical protein 1620232 4896361 Rsph17029_1541 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043423.1 1619657 D 349101 CDS YP_001043424.1 126462310 4896969 complement(1620246..1620692) 1 NC_009049.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 1620692 4896969 Rsph17029_1542 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit chi YP_001043424.1 1620246 R 349101 CDS YP_001043425.1 126462311 4895389 complement(1620808..1622277) 1 NC_009049.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1622277 4895389 Rsph17029_1543 Rhodobacter sphaeroides ATCC 17029 leucyl aminopeptidase YP_001043425.1 1620808 R 349101 CDS YP_001043426.1 126462312 4896888 1622501..1623631 1 NC_009049.1 PFAM: permease YjgP/YjgQ family protein; KEGG: rsp:RSP_2900 predicted permease; YjgP/YjgQ family permease 1623631 4896888 Rsph17029_1544 Rhodobacter sphaeroides ATCC 17029 YjgP/YjgQ family permease YP_001043426.1 1622501 D 349101 CDS YP_001043427.1 126462313 4895927 1623628..1624722 1 NC_009049.1 PFAM: permease YjgP/YjgQ family protein; KEGG: rsp:RSP_2901 putative permease; YjgP/YjgQ family permease 1624722 4895927 Rsph17029_1545 Rhodobacter sphaeroides ATCC 17029 YjgP/YjgQ family permease YP_001043427.1 1623628 D 349101 CDS YP_001043428.1 126462314 4897004 1624722..1626866 1 NC_009049.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: rsp:RSP_2902 putative organic solvent tolerance protein; organic solvent tolerance protein 1626866 4897004 Rsph17029_1546 Rhodobacter sphaeroides ATCC 17029 organic solvent tolerance protein YP_001043428.1 1624722 D 349101 CDS YP_001043429.1 126462315 4895509 1626883..1628190 1 NC_009049.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rsp:RSP_2903 probable PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1628190 4895509 Rsph17029_1547 Rhodobacter sphaeroides ATCC 17029 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001043429.1 1626883 D 349101 CDS YP_001043430.1 126462316 4895818 1628187..1629155 1 NC_009049.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1629155 pdxA 4895818 pdxA Rhodobacter sphaeroides ATCC 17029 4-hydroxythreonine-4-phosphate dehydrogenase YP_001043430.1 1628187 D 349101 CDS YP_001043431.1 126462317 4895229 1629233..1630069 1 NC_009049.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1630069 ksgA 4895229 ksgA Rhodobacter sphaeroides ATCC 17029 dimethyladenosine transferase YP_001043431.1 1629233 D 349101 CDS YP_001043432.1 126462318 4897071 complement(1630452..1631279) 1 NC_009049.1 KEGG: rsp:RSP_6078 hypothetical protein; hypothetical protein 1631279 4897071 Rsph17029_1550 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043432.1 1630452 R 349101 CDS YP_001043433.1 126462319 4895848 complement(1631537..1632373) 1 NC_009049.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: rsp:RSP_2906 putative methylase; HemK family modification methylase 1632373 4895848 Rsph17029_1551 Rhodobacter sphaeroides ATCC 17029 HemK family modification methylase YP_001043433.1 1631537 R 349101 CDS YP_001043434.1 126462320 4897096 complement(1632370..1633425) 1 NC_009049.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1633425 prfA 4897096 prfA Rhodobacter sphaeroides ATCC 17029 peptide chain release factor 1 YP_001043434.1 1632370 R 349101 CDS YP_001043435.1 126462321 4895831 complement(1633573..1634025) 1 NC_009049.1 KEGG: rsp:RSP_2908 hypothetical protein; hypothetical protein 1634025 4895831 Rsph17029_1553 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043435.1 1633573 R 349101 CDS YP_001043436.1 126462322 4895533 complement(1634022..1634987) 1 NC_009049.1 catalyzes the formation of putrescine from agmatine; agmatinase 1634987 4895533 Rsph17029_1554 Rhodobacter sphaeroides ATCC 17029 agmatinase YP_001043436.1 1634022 R 349101 CDS YP_001043437.1 126462323 4895695 complement(1635200..1636366) 1 NC_009049.1 KEGG: rsp:RSP_2910 predicted metal-dependent amidase/aminoacylase/carboxypeptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1636366 4895695 Rsph17029_1555 Rhodobacter sphaeroides ATCC 17029 amidohydrolase YP_001043437.1 1635200 R 349101 CDS YP_001043438.1 126462324 4896530 1636577..1637383 1 NC_009049.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 1637383 mazG 4896530 mazG Rhodobacter sphaeroides ATCC 17029 nucleoside triphosphate pyrophosphohydrolase YP_001043438.1 1636577 D 349101 CDS YP_001043439.1 126462325 4896490 1637646..1638656 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2913 ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 1638656 4896490 Rsph17029_1557 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043439.1 1637646 D 349101 CDS YP_001043440.1 126462326 4896436 1638883..1639824 1 NC_009049.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rsp:RSP_2914 nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1639824 4896436 Rsph17029_1558 Rhodobacter sphaeroides ATCC 17029 inosine/uridine-preferring nucleoside hydrolase YP_001043440.1 1638883 D 349101 CDS YP_001043441.1 126462327 4895583 complement(1639893..1640933) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_2915 probable two-component sensor histidine kinase; PAS/PAC sensor signal transduction histidine kinase 1640933 4895583 Rsph17029_1559 Rhodobacter sphaeroides ATCC 17029 PAS/PAC sensor signal transduction histidine kinase YP_001043441.1 1639893 R 349101 CDS YP_001043442.1 126462328 4896866 1641094..1641510 1 NC_009049.1 KEGG: rsp:RSP_2916 hypothetical protein; hypothetical protein 1641510 4896866 Rsph17029_1560 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043442.1 1641094 D 349101 CDS YP_001043443.1 126462329 4895192 complement(1641515..1642708) 1 NC_009049.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: rsp:RSP_2917 putative cystathionine gamma-synthase beta-lyase; cystathionine gamma-lyase 1642708 4895192 Rsph17029_1561 Rhodobacter sphaeroides ATCC 17029 cystathionine gamma-lyase YP_001043443.1 1641515 R 349101 CDS YP_001043444.1 126462330 4897007 complement(1642791..1643309) 1 NC_009049.1 KEGG: rsp:RSP_2918 predicted ferripyochelin binding protein; ferripyochelin binding protein 1643309 4897007 Rsph17029_1562 Rhodobacter sphaeroides ATCC 17029 ferripyochelin binding protein YP_001043444.1 1642791 R 349101 CDS YP_001043445.1 126462331 4897248 complement(1643306..1643941) 1 NC_009049.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1643941 gmk 4897248 gmk Rhodobacter sphaeroides ATCC 17029 guanylate kinase YP_001043445.1 1643306 R 349101 CDS YP_001043446.1 126462332 4895904 complement(1643946..1644836) 1 NC_009049.1 PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: rsp:RSP_2920 hypothetical protein; hypothetical protein 1644836 4895904 Rsph17029_1564 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043446.1 1643946 R 349101 CDS YP_001043447.1 126462333 4897006 1645027..1645698 1 NC_009049.1 PFAM: protein of unknown function DUF1457; KEGG: rsp:RSP_6079 hypothetical protein; hypothetical protein 1645698 4897006 Rsph17029_1565 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043447.1 1645027 D 349101 CDS YP_001043448.1 126462334 4895358 complement(1645792..1647162) 1 NC_009049.1 KEGG: rsp:RSP_2921 phospho-2-dehydro-3-deoxyheptonate; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; phospho-2-dehydro-3-deoxyheptonate aldolase 1647162 4895358 Rsph17029_1566 Rhodobacter sphaeroides ATCC 17029 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001043448.1 1645792 R 349101 CDS YP_001043449.1 126462335 4897026 1647307..1648320 1 NC_009049.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: rsp:RSP_2922 transcriptional regulator, AraC family; AraC family transcriptional regulator 1648320 4897026 Rsph17029_1567 Rhodobacter sphaeroides ATCC 17029 AraC family transcriptional regulator YP_001043449.1 1647307 D 349101 CDS YP_001043450.1 126462336 4895511 1648498..1649682 1 NC_009049.1 PFAM: Extracellular ligand-binding receptor; KEGG: rsp:RSP_2923 ABC branched amino acid transporter family, periplasmic substrate-binding protein; extracellular ligand-binding receptor 1649682 4895511 Rsph17029_1568 Rhodobacter sphaeroides ATCC 17029 extracellular ligand-binding receptor YP_001043450.1 1648498 D 349101 CDS YP_001043451.1 126462337 4896228 1649811..1650593 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2924 ABC branched-chain amino acid transporter family, ATPase subunit; ABC transporter 1650593 4896228 Rsph17029_1569 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043451.1 1649811 D 349101 CDS YP_001043452.1 126462338 4896266 1650686..1651396 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2925 ABC branched-chain amino acid transporter family, ATPase subunit; ABC transporter 1651396 4896266 Rsph17029_1570 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043452.1 1650686 D 349101 CDS YP_001043453.1 126462339 4896486 1651400..1652410 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2926 ABC branched-chain amino acid transporter family, inner membrane subunit; inner-membrane translocator 1652410 4896486 Rsph17029_1571 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001043453.1 1651400 D 349101 CDS YP_001043454.1 126462340 4897299 1652407..1653702 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_2927 ABC branched-chain amino acid transporter family, inner membrane subunit; inner-membrane translocator 1653702 4897299 Rsph17029_1572 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001043454.1 1652407 D 349101 CDS YP_001043455.1 126462341 4896491 1653707..1654306 1 NC_009049.1 KEGG: rsp:RSP_2928 hypothetical protein; hypothetical protein 1654306 4896491 Rsph17029_1573 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043455.1 1653707 D 349101 CDS YP_001043456.1 126462342 4895254 complement(1654364..1654987) 1 NC_009049.1 KEGG: rsp:RSP_2930 hypothetical protein; hypothetical protein 1654987 4895254 Rsph17029_1574 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043456.1 1654364 R 349101 CDS YP_001043457.1 126462343 4897754 1656074..1656538 1 NC_009049.1 PFAM: Disulphide bond formation protein DsbB; KEGG: rsp:RSP_2929 putative disulfide bond formation protein DsbB; disulfide bond formation protein DsbB 1656538 4897754 Rsph17029_1575 Rhodobacter sphaeroides ATCC 17029 disulfide bond formation protein DsbB YP_001043457.1 1656074 D 349101 CDS YP_001043458.1 126462344 4895288 complement(1656553..1657239) 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rsp:RSP_2932 histidine utilization repressor, GntR family; UbiC transcription regulator-associated domain-containing protein 1657239 4895288 Rsph17029_1576 Rhodobacter sphaeroides ATCC 17029 UbiC transcription regulator-associated domain-containing protein YP_001043458.1 1656553 R 349101 CDS YP_001043459.1 126462345 4895387 complement(1657239..1658606) 1 NC_009049.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 1658606 4895387 Rsph17029_1577 Rhodobacter sphaeroides ATCC 17029 N-formimino-L-glutamate deiminase YP_001043459.1 1657239 R 349101 CDS YP_001043460.1 126462346 4895458 1658633..1659865 1 NC_009049.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 1659865 4895458 Rsph17029_1578 Rhodobacter sphaeroides ATCC 17029 imidazolonepropionase YP_001043460.1 1658633 D 349101 CDS YP_001043461.1 126462347 4896028 1659865..1661388 1 NC_009049.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1661388 4896028 Rsph17029_1579 Rhodobacter sphaeroides ATCC 17029 histidine ammonia-lyase YP_001043461.1 1659865 D 349101 CDS YP_001043462.1 126462348 4896240 1661399..1663081 1 NC_009049.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1663081 4896240 Rsph17029_1580 Rhodobacter sphaeroides ATCC 17029 urocanate hydratase YP_001043462.1 1661399 D 349101 CDS YP_001043463.1 126462349 4896321 complement(1663188..1664108) 1 NC_009049.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rba:RB7610 similar to DNA-dependent DNA polymerase beta chain YshC; phosphotransferase domain-containing protein 1664108 4896321 Rsph17029_1581 Rhodobacter sphaeroides ATCC 17029 phosphotransferase domain-containing protein YP_001043463.1 1663188 R 349101 CDS YP_001043464.1 126462350 4896388 1664239..1664931 1 NC_009049.1 PFAM: protein of unknown function DUF1045; KEGG: rsp:RSP_2937 hypothetical protein; hypothetical protein 1664931 4896388 Rsph17029_1582 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043464.1 1664239 D 349101 CDS YP_001043465.1 126462351 4896535 complement(1664936..1665364) 1 NC_009049.1 KEGG: rsp:RSP_6080 hypothetical protein; hypothetical protein 1665364 4896535 Rsph17029_1583 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043465.1 1664936 R 349101 CDS YP_001043466.1 126462352 4896531 complement(1665720..1666355) 1 NC_009049.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rsp:RSP_2939 predicted transcriptional regulator containing the HTH domain; putative transcriptional regulator 1666355 4896531 Rsph17029_1584 Rhodobacter sphaeroides ATCC 17029 putative transcriptional regulator YP_001043466.1 1665720 R 349101 CDS YP_001043467.1 126462353 4896682 complement(1666352..1667146) 1 NC_009049.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: rsp:RSP_2940 hypothetical protein; chromosome segregation and condensation protein ScpA 1667146 4896682 Rsph17029_1585 Rhodobacter sphaeroides ATCC 17029 chromosome segregation and condensation protein ScpA YP_001043467.1 1666352 R 349101 CDS YP_001043468.1 126462354 4896856 complement(1667133..1668146) 1 NC_009049.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: rsp:RSP_2941 putative glycoside hydrolase; beta-N-acetylhexosaminidase 1668146 4896856 Rsph17029_1586 Rhodobacter sphaeroides ATCC 17029 beta-N-acetylhexosaminidase YP_001043468.1 1667133 R 349101 CDS YP_001043469.1 126462355 4896882 complement(1668143..1669129) 1 NC_009049.1 PFAM: Sporulation domain protein; KEGG: rsp:RSP_2942 hypothetical protein; sporulation domain-containing protein 1669129 4896882 Rsph17029_1587 Rhodobacter sphaeroides ATCC 17029 sporulation domain-containing protein YP_001043469.1 1668143 R 349101 CDS YP_001043470.1 126462356 4896977 complement(1669200..1670942) 1 NC_009049.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1670942 argS 4896977 argS Rhodobacter sphaeroides ATCC 17029 arginyl-tRNA synthetase YP_001043470.1 1669200 R 349101 CDS YP_001043471.1 126462357 4897032 complement(1671018..1671503) 1 NC_009049.1 KEGG: rsp:RSP_6081 hypothetical protein; hypothetical protein 1671503 4897032 Rsph17029_1589 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043471.1 1671018 R 349101 CDS YP_001043472.1 126462358 4897129 complement(1671494..1672105) 1 NC_009049.1 PFAM: protein of unknown function DUF847; KEGG: rsp:RSP_2944 hypothetical protein; hypothetical protein 1672105 4897129 Rsph17029_1590 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043472.1 1671494 R 349101 CDS YP_001043473.1 126462359 4897370 complement(1672255..1672710) 1 NC_009049.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 1672710 4897370 Rsph17029_1591 Rhodobacter sphaeroides ATCC 17029 cytochrome c-type biogenesis protein CcmE YP_001043473.1 1672255 R 349101 CDS YP_001043474.1 126462360 4897458 complement(1672733..1673761) 1 NC_009049.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1673761 argC 4897458 argC Rhodobacter sphaeroides ATCC 17029 N-acetyl-gamma-glutamyl-phosphate reductase YP_001043474.1 1672733 R 349101 CDS YP_001043475.1 126462361 4898088 complement(1673786..1674598) 1 NC_009049.1 KEGG: rsp:RSP_2947 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; glutamate racemase 1674598 4898088 Rsph17029_1593 Rhodobacter sphaeroides ATCC 17029 glutamate racemase YP_001043475.1 1673786 R 349101 CDS YP_001043476.1 126462362 4896116 complement(1674736..1678122) 1 NC_009049.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 1678122 4896116 Rsph17029_1594 Rhodobacter sphaeroides ATCC 17029 indolepyruvate ferredoxin oxidoreductase YP_001043476.1 1674736 R 349101 CDS YP_001043477.1 126462363 4896591 1678279..1679172 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2950 transcriptional regulator, LysR family; LysR family transcriptional regulator 1679172 4896591 Rsph17029_1595 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001043477.1 1678279 D 349101 CDS YP_001043478.1 126462364 4897441 1679558..1681780 1 NC_009049.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1681780 4897441 Rsph17029_1596 Rhodobacter sphaeroides ATCC 17029 phosphoribosylformylglycinamidine synthase II YP_001043478.1 1679558 D 349101 CDS YP_001043479.1 126462365 4896855 1682014..1682256 1 NC_009049.1 PFAM: BolA family protein; KEGG: rsp:RSP_2952 BolA-like protein; BolA family protein 1682256 4896855 Rsph17029_1597 Rhodobacter sphaeroides ATCC 17029 BolA family protein YP_001043479.1 1682014 D 349101 CDS YP_001043480.1 126462366 4896395 1682316..1682681 1 NC_009049.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rsp:RSP_2953 glutaredoxin-related protein; glutaredoxin-like protein 1682681 4896395 Rsph17029_1598 Rhodobacter sphaeroides ATCC 17029 glutaredoxin-like protein YP_001043480.1 1682316 D 349101 CDS YP_001043481.1 126462367 4895982 complement(1682941..1683315) 1 NC_009049.1 PFAM: protein of unknown function DUF710; KEGG: rsp:RSP_2954 hypothetical protein; hypothetical protein 1683315 4895982 Rsph17029_1599 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043481.1 1682941 R 349101 CDS YP_001043482.1 126462368 4897529 complement(1683308..1683775) 1 NC_009049.1 KEGG: rsp:RSP_2955 hypothetical protein; hypothetical protein 1683775 4897529 Rsph17029_1600 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043482.1 1683308 R 349101 CDS YP_001043483.1 126462369 4897181 1684033..1686051 1 NC_009049.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1686051 4897181 Rsph17029_1601 Rhodobacter sphaeroides ATCC 17029 transketolase YP_001043483.1 1684033 D 349101 CDS YP_001043484.1 126462370 4896238 complement(1686123..1686416) 1 NC_009049.1 KEGG: rsp:RSP_2957 hypothetical protein; hypothetical protein 1686416 4896238 Rsph17029_1602 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043484.1 1686123 R 349101 CDS YP_001043485.1 126462371 4897822 complement(1686448..1687419) 1 NC_009049.1 PFAM: protein of unknown function DUF808; KEGG: rsp:RSP_2958 hypothetical protein; hypothetical protein 1687419 4897822 Rsph17029_1603 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043485.1 1686448 R 349101 CDS YP_001043486.1 126462372 4895080 1687991..1688992 1 NC_009049.1 KEGG: rsp:RSP_2959 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 1688992 4895080 Rsph17029_1604 Rhodobacter sphaeroides ATCC 17029 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001043486.1 1687991 D 349101 CDS YP_001043487.1 126462373 4895079 1689201..1689356 1 NC_009049.1 KEGG: rsp:RSP_6082 hypothetical protein; hypothetical protein 1689356 4895079 Rsph17029_1605 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043487.1 1689201 D 349101 CDS YP_001043488.1 126462374 4895124 complement(1689383..1689871) 1 NC_009049.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1689871 coaD 4895124 coaD Rhodobacter sphaeroides ATCC 17029 phosphopantetheine adenylyltransferase YP_001043488.1 1689383 R 349101 CDS YP_001043489.1 126462375 4896810 complement(1689941..1690375) 1 NC_009049.1 PFAM: CBS domain containing protein; KEGG: rsp:RSP_2961 protein containing a CBS domain; signal-transduction protein 1690375 4896810 Rsph17029_1607 Rhodobacter sphaeroides ATCC 17029 signal-transduction protein YP_001043489.1 1689941 R 349101 CDS YP_001043490.1 126462376 4896122 complement(1690430..1691323) 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2965 transcriptional regulator, LysR family; LysR family transcriptional regulator 1691323 4896122 Rsph17029_1608 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001043490.1 1690430 R 349101 CDS YP_001043491.1 126462377 4897296 1691426..1692925 1 NC_009049.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_2962 methylmalonic acid semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1692925 4897296 Rsph17029_1609 Rhodobacter sphaeroides ATCC 17029 methylmalonate-semialdehyde dehydrogenase YP_001043491.1 1691426 D 349101 CDS YP_001043492.1 126462378 4896477 1693265..1693921 1 NC_009049.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: rsp:RSP_2963 transcriptional regulator, Crp-Fnr family; CRP/FNR family transcriptional regulator 1693921 4896477 Rsph17029_1610 Rhodobacter sphaeroides ATCC 17029 CRP/FNR family transcriptional regulator YP_001043492.1 1693265 D 349101 CDS YP_001043493.1 126462379 4895906 1694172..1694375 1 NC_009049.1 KEGG: rsp:RSP_2964 hypothetical protein; hypothetical protein 1694375 4895906 Rsph17029_1611 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043493.1 1694172 D 349101 CDS YP_001043494.1 126462380 4897209 complement(1694610..1697468) 1 NC_009049.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1697468 uvrA 4897209 uvrA Rhodobacter sphaeroides ATCC 17029 excinuclease ABC subunit A YP_001043494.1 1694610 R 349101 CDS YP_001043495.1 126462381 4897477 complement(1697585..1698751) 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2967 probable transporter, major facilitator superfamily (MFS); major facilitator superfamily transporter 1698751 4897477 Rsph17029_1613 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001043495.1 1697585 R 349101 CDS YP_001043496.1 126462382 4896198 complement(1698927..1700321) 1 NC_009049.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1700321 4896198 Rsph17029_1614 Rhodobacter sphaeroides ATCC 17029 dihydrolipoamide dehydrogenase YP_001043496.1 1698927 R 349101 CDS YP_001043497.1 126462383 4897313 complement(1700410..1700985) 1 NC_009049.1 PFAM: protein of unknown function DUF924; KEGG: rsp:RSP_2969 hypothetical protein; hypothetical protein 1700985 4897313 Rsph17029_1615 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043497.1 1700410 R 349101 CDS YP_001043498.1 126462384 4897169 complement(1701192..1702448) 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2970 transporter, major facilitator superfamily (MFS); major facilitator superfamily transporter 1702448 4897169 Rsph17029_1616 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001043498.1 1701192 R 349101 CDS YP_001043499.1 126462385 4897027 complement(1702528..1703568) 1 NC_009049.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1703568 queA 4897027 queA Rhodobacter sphaeroides ATCC 17029 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001043499.1 1702528 R 349101 CDS YP_001043500.1 126462386 4895845 complement(1703654..1706938) 1 NC_009049.1 KEGG: rsp:RSP_2972 hypothetical protein; hypothetical protein 1706938 4895845 Rsph17029_1618 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043500.1 1703654 R 349101 CDS YP_001043501.1 126462387 4897314 1707029..1707490 1 NC_009049.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_2973 peroxiredoxin; alkyl hydroperoxide reductase 1707490 4897314 Rsph17029_1619 Rhodobacter sphaeroides ATCC 17029 alkyl hydroperoxide reductase YP_001043501.1 1707029 D 349101 CDS YP_001043502.1 126462388 4897835 1707901..1709244 1 NC_009049.1 PFAM: peptidase M23B; KEGG: rsp:RSP_2974 putative metalopeptidase; peptidase M23B 1709244 4897835 Rsph17029_1620 Rhodobacter sphaeroides ATCC 17029 peptidase M23B YP_001043502.1 1707901 D 349101 CDS YP_001043503.1 126462389 4897492 1709234..1709752 1 NC_009049.1 PFAM: protein of unknown function DUF583; KEGG: rsp:RSP_2975 hypothetical protein; hypothetical protein 1709752 4897492 Rsph17029_1621 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043503.1 1709234 D 349101 CDS YP_001043504.1 126462390 4895068 complement(1709948..1710724) 1 NC_009049.1 KEGG: rsp:RSP_2976 hypothetical protein; hypothetical protein 1710724 4895068 Rsph17029_1622 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043504.1 1709948 R 349101 CDS YP_001043505.1 126462391 4895061 complement(1711097..1712224) 1 NC_009049.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 1712224 prfB 4895061 prfB Rhodobacter sphaeroides ATCC 17029 peptide chain release factor 2 YP_001043505.1 1711097 R 349101 CDS YP_001043506.1 126462392 4895075 complement(1712333..1714882) 1 NC_009049.1 KEGG: rsp:RSP_2978 penicillin-binding protein 1A (PBP-1a); TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 1714882 4895075 Rsph17029_1624 Rhodobacter sphaeroides ATCC 17029 1A family penicillin-binding protein YP_001043506.1 1712333 R 349101 CDS YP_001043507.1 126462393 4895105 complement(1714974..1716209) 1 NC_009049.1 PFAM: cell wall hydrolase/autolysin; KEGG: rsp:RSP_2979 probable N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1716209 4895105 Rsph17029_1625 Rhodobacter sphaeroides ATCC 17029 N-acetylmuramoyl-L-alanine amidase YP_001043507.1 1714974 R 349101 CDS YP_001043508.1 126462394 4897031 complement(1716258..1717409) 1 NC_009049.1 PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_2980 putative aspartate aminotransferase A; class I and II aminotransferase 1717409 4897031 Rsph17029_1626 Rhodobacter sphaeroides ATCC 17029 class I and II aminotransferase YP_001043508.1 1716258 R 349101 CDS YP_001043509.1 126462395 4895110 1717577..1718320 1 NC_009049.1 PFAM: DSBA oxidoreductase; KEGG: rsp:RSP_2981 putative protein-disulfide isomerase; DSBA oxidoreductase 1718320 4895110 Rsph17029_1627 Rhodobacter sphaeroides ATCC 17029 DSBA oxidoreductase YP_001043509.1 1717577 D 349101 CDS YP_001043510.1 126462396 4895116 complement(1718659..1719792) 1 NC_009049.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1719792 ispG 4895116 ispG Rhodobacter sphaeroides ATCC 17029 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001043510.1 1718659 R 349101 CDS YP_001043511.1 126462397 4896858 complement(1719923..1721137) 1 NC_009049.1 KEGG: rsp:RSP_2983 hypothetical protein; hypothetical protein 1721137 4896858 Rsph17029_1629 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043511.1 1719923 R 349101 CDS YP_001043512.1 126462398 4895118 complement(1721248..1722471) 1 NC_009049.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 1722471 4895118 Rsph17029_1630 Rhodobacter sphaeroides ATCC 17029 5-aminolevulinate synthase YP_001043512.1 1721248 R 349101 CDS YP_001043513.1 126462399 4895654 complement(1722606..1723175) 1 NC_009049.1 KEGG: rsp:RSP_2985 hypothetical protein; hypothetical protein 1723175 4895654 Rsph17029_1631 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043513.1 1722606 R 349101 CDS YP_001043514.1 126462400 4895139 1723406..1724779 1 NC_009049.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rsp:RSP_2986 hypothetical protein; hypothetical protein 1724779 4895139 Rsph17029_1632 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043514.1 1723406 D 349101 CDS YP_001043515.1 126462401 4896475 1724776..1725219 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2987 probable acetyltransferase; N-acetyltransferase GCN5 1725219 4896475 Rsph17029_1633 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001043515.1 1724776 D 349101 CDS YP_001043516.1 126462402 4897242 complement(1725697..1726629) 1 NC_009049.1 PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: rsp:RSP_2988 pirin-related protein; pirin domain-containing protein 1726629 4897242 Rsph17029_1634 Rhodobacter sphaeroides ATCC 17029 pirin domain-containing protein YP_001043516.1 1725697 R 349101 CDS YP_001043517.1 126462403 4895146 1726804..1728360 1 NC_009049.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1728360 guaA 4895146 guaA Rhodobacter sphaeroides ATCC 17029 GMP synthase YP_001043517.1 1726804 D 349101 CDS YP_001043518.1 126462404 4895202 1728828..1729715 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0006 possible transporter, DMT superfamily; hypothetical protein 1729715 4895202 Rsph17029_1636 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043518.1 1728828 D 349101 CDS YP_001043519.1 126462405 4895209 1729800..1730918 1 NC_009049.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: rsp:RSP_0007 putative outer membrane protein; aromatic hydrocarbon degradation membrane protein 1730918 4895209 Rsph17029_1637 Rhodobacter sphaeroides ATCC 17029 aromatic hydrocarbon degradation membrane protein YP_001043519.1 1729800 D 349101 CDS YP_001043520.1 126462406 4895246 1730971..1731936 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0008 possible transporter, DME family, DMT superfamily; hypothetical protein 1731936 4895246 Rsph17029_1638 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043520.1 1730971 D 349101 CDS YP_001043521.1 126462407 4895276 1731969..1732838 1 NC_009049.1 KEGG: rsp:RSP_0009 hypothetical protein; hypothetical protein 1732838 4895276 Rsph17029_1639 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043521.1 1731969 D 349101 CDS YP_001043522.1 126462408 4895302 1732869..1733786 1 NC_009049.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1733786 4895302 Rsph17029_1640 Rhodobacter sphaeroides ATCC 17029 homoserine O-succinyltransferase YP_001043522.1 1732869 D 349101 CDS YP_001043523.1 126462409 4895291 1733776..1734729 1 NC_009049.1 PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_0011 predicted hydrolase or acyltransferase (alpha/beta hydrolase); alpha/beta hydrolase 1734729 4895291 Rsph17029_1641 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001043523.1 1733776 D 349101 CDS YP_001043524.1 126462410 4895322 1734770..1735654 1 NC_009049.1 PFAM: protein of unknown function DUF344; KEGG: rsp:RSP_0013 hypothetical protein; hypothetical protein 1735654 4895322 Rsph17029_1642 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043524.1 1734770 D 349101 CDS YP_001043525.1 126462411 4895342 1735651..1736268 1 NC_009049.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_0014 transcriptional regulator, TetR family; TetR family transcriptional regulator 1736268 4895342 Rsph17029_1643 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001043525.1 1735651 D 349101 CDS YP_001043526.1 126462412 4895340 complement(1736421..1737494) 1 NC_009049.1 KEGG: rsp:RSP_0015 ABC spermidine/putrescine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1737494 4895340 Rsph17029_1644 Rhodobacter sphaeroides ATCC 17029 spermidine/putrescine ABC transporter ATPase YP_001043526.1 1736421 R 349101 CDS YP_001043527.1 126462413 4895380 complement(1737515..1738321) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0016 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1738321 4895380 Rsph17029_1645 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043527.1 1737515 R 349101 CDS YP_001043528.1 126462414 4895410 complement(1738318..1739205) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0017 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1739205 4895410 Rsph17029_1646 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043528.1 1738318 R 349101 CDS YP_001043529.1 126462415 4895409 complement(1739633..1741036) 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rsp:RSP_0018 putative transcriptional regulator, GntR family; GntR family transcriptional regulator 1741036 4895409 Rsph17029_1647 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001043529.1 1739633 R 349101 CDS YP_001043530.1 126462416 4895496 1741121..1741348 1 NC_009049.1 KEGG: rsp:RSP_0019 hypothetical protein; hypothetical protein 1741348 4895496 Rsph17029_1648 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043530.1 1741121 D 349101 CDS YP_001043531.1 126462417 4895501 complement(1741440..1742147) 1 NC_009049.1 PFAM: protein of unknown function DUF1003; KEGG: rsp:RSP_0020 hypothetical protein; hypothetical protein 1742147 4895501 Rsph17029_1649 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043531.1 1741440 R 349101 CDS YP_001043532.1 126462418 4895480 complement(1742488..1742970) 1 NC_009049.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1742970 rpsI 4895480 rpsI Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S9 YP_001043532.1 1742488 R 349101 CDS YP_001043533.1 126462419 4895545 complement(1742974..1743438) 1 NC_009049.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1743438 rplM 4895545 rplM Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L13 YP_001043533.1 1742974 R 349101 CDS YP_001043534.1 126462420 4895551 complement(1743643..1744434) 1 NC_009049.1 KEGG: rsp:RSP_6083 hypothetical protein; hypothetical protein 1744434 4895551 Rsph17029_1652 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043534.1 1743643 R 349101 CDS YP_001043535.1 126462421 4895633 1745010..1745543 1 NC_009049.1 KEGG: rsp:RSP_0024 putative dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-L-rhamnose synthetase); TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1745543 4895633 Rsph17029_1653 Rhodobacter sphaeroides ATCC 17029 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001043535.1 1745010 D 349101 CDS YP_001043536.1 126462422 4895631 complement(1745867..1747216) 1 NC_009049.1 PFAM: oxidoreductase domain protein; SAF domain; KEGG: rsp:RSP_0025 probable NAD(P)-dependent oxidoreductase; SAF domain-containing protein 1747216 4895631 Rsph17029_1654 Rhodobacter sphaeroides ATCC 17029 SAF domain-containing protein YP_001043536.1 1745867 R 349101 CDS YP_001043537.1 126462423 4895555 complement(1747213..1748268) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: rsp:RSP_0026 probable epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1748268 4895555 Rsph17029_1655 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001043537.1 1747213 R 349101 CDS YP_001043538.1 126462424 4895688 complement(1748466..1749257) 1 NC_009049.1 KEGG: rsp:RSP_0027 hypothetical protein; hypothetical protein 1749257 4895688 Rsph17029_1656 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043538.1 1748466 R 349101 CDS YP_001043539.1 126462425 4895767 1749485..1750483 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0028 short chain dehydrogenase; short chain dehydrogenase 1750483 4895767 Rsph17029_1657 Rhodobacter sphaeroides ATCC 17029 short chain dehydrogenase YP_001043539.1 1749485 D 349101 CDS YP_001043540.1 126462426 4895665 1750645..1752144 1 NC_009049.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: rsp:RSP_0029 acetyl-CoA hydrolase/transferase family protein; Acetyl-CoA hydrolase 1752144 4895665 Rsph17029_1658 Rhodobacter sphaeroides ATCC 17029 Acetyl-CoA hydrolase YP_001043540.1 1750645 D 349101 CDS YP_001043541.1 126462427 4895787 complement(1752417..1754918) 1 NC_009049.1 KEGG: rsp:RSP_0030 PAS sensor diguanylatecyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1754918 4895787 Rsph17029_1659 Rhodobacter sphaeroides ATCC 17029 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001043541.1 1752417 R 349101 CDS YP_001043542.1 126462428 4895768 complement(1754965..1755138) 1 NC_009049.1 KEGG: rsp:RSP_6084 hypothetical protein; hypothetical protein 1755138 4895768 Rsph17029_1660 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043542.1 1754965 R 349101 CDS YP_001043543.1 126462429 4895824 1755391..1756209 1 NC_009049.1 KEGG: rsp:RSP_6085 hypothetical protein; hypothetical protein 1756209 4895824 Rsph17029_1661 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043543.1 1755391 D 349101 CDS YP_001043544.1 126462430 4895821 complement(1756345..1757064) 1 NC_009049.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rsp:RSP_0032 sigma factor FliA (sigma-28 group, flagellar); FliA/WhiG family RNA polymerase sigma factor 1757064 4895821 Rsph17029_1662 Rhodobacter sphaeroides ATCC 17029 FliA/WhiG family RNA polymerase sigma factor YP_001043544.1 1756345 R 349101 CDS YP_001043545.1 126462431 4895826 complement(1757061..1758074) 1 NC_009049.1 KEGG: rsp:RSP_0033 hypothetical protein; hypothetical protein 1758074 4895826 Rsph17029_1663 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043545.1 1757061 R 349101 CDS YP_001043546.1 126462432 4895801 complement(1758078..1760192) 1 NC_009049.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: rsp:RSP_0034 flagellar biosynthesis protein, FlhA; flagellar biosynthesis protein FlhA 1760192 4895801 Rsph17029_1664 Rhodobacter sphaeroides ATCC 17029 flagellar biosynthesis protein FlhA YP_001043546.1 1758078 R 349101 CDS YP_001043547.1 126462433 4895862 1760380..1760913 1 NC_009049.1 PFAM: protein of unknown function DUF400; KEGG: rsp:RSP_0035 hypothetical protein; hypothetical protein 1760913 4895862 Rsph17029_1665 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043547.1 1760380 D 349101 CDS YP_001043548.1 126462434 4895880 1760910..1761992 1 NC_009049.1 KEGG: rsp:RSP_6086 hypothetical protein; hypothetical protein 1761992 4895880 Rsph17029_1666 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043548.1 1760910 D 349101 CDS YP_001043549.1 126462435 4895998 1761995..1762657 1 NC_009049.1 PFAM: SAF domain; KEGG: rsp:RSP_0036 flagellar basal-body P-ring formation protein FlgA; SAF domain-containing protein 1762657 4895998 Rsph17029_1667 Rhodobacter sphaeroides ATCC 17029 SAF domain-containing protein YP_001043549.1 1761995 D 349101 CDS YP_001043550.1 126462436 4896045 1762694..1762993 1 NC_009049.1 KEGG: rsp:RSP_0037 putative FlgM, negative regulator of flagellin synthesis; putative anti-sigma-28 factor, FlgM 1762993 4896045 Rsph17029_1668 Rhodobacter sphaeroides ATCC 17029 putative anti-sigma-28 factor, FlgM YP_001043550.1 1762694 D 349101 CDS YP_001043551.1 126462437 4896043 1763022..1763393 1 NC_009049.1 KEGG: rsp:RSP_6087 hypothetical protein; hypothetical protein 1763393 4896043 Rsph17029_1669 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043551.1 1763022 D 349101 CDS YP_001043552.1 126462438 4896080 complement(1763412..1764044) 1 NC_009049.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: rsp:RSP_6088 hypothetical protein (Sel1-like repeat); Sel1 domain-containing protein 1764044 4896080 Rsph17029_1670 Rhodobacter sphaeroides ATCC 17029 Sel1 domain-containing protein YP_001043552.1 1763412 R 349101 CDS YP_001043553.1 126462439 4896078 complement(1764041..1764436) 1 NC_009049.1 KEGG: rsp:RSP_6089 hypothetical protein; hypothetical protein 1764436 4896078 Rsph17029_1671 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043553.1 1764041 R 349101 CDS YP_001043554.1 126462440 4896152 1764603..1765088 1 NC_009049.1 KEGG: rsp:RSP_6090 hypothetical protein; hypothetical protein 1765088 4896152 Rsph17029_1672 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043554.1 1764603 D 349101 CDS YP_001043555.1 126462441 4896220 1765142..1765330 1 NC_009049.1 KEGG: rsp:RSP_0038 hypothetical protein; hypothetical protein 1765330 4896220 Rsph17029_1673 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043555.1 1765142 D 349101 CDS YP_001043556.1 126462442 4896129 complement(1765658..1765975) 1 NC_009049.1 KEGG: rsp:RSP_0039 hypothetical protein; hypothetical protein 1765975 4896129 Rsph17029_1674 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043556.1 1765658 R 349101 CDS YP_001043557.1 126462443 4896285 complement(1765972..1766352) 1 NC_009049.1 KEGG: rsp:RSP_0040 putative flagellar protein FliS; putative flagellar protein FliS 1766352 4896285 Rsph17029_1675 Rhodobacter sphaeroides ATCC 17029 putative flagellar protein FliS YP_001043557.1 1765972 R 349101 CDS YP_001043558.1 126462444 4896296 complement(1766636..1767217) 1 NC_009049.1 KEGG: rsp:RSP_0041 hypothetical protein; hypothetical protein 1767217 4896296 Rsph17029_1676 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043558.1 1766636 R 349101 CDS YP_001043559.1 126462445 4896366 complement(1767354..1770641) 1 NC_009049.1 PFAM: CheW domain protein; Hpt domain protein; KEGG: rsp:RSP_0042 chemotaxis histidine protein kinase, CheA3; putative CheA signal transduction histidine kinases 1770641 4896366 Rsph17029_1677 Rhodobacter sphaeroides ATCC 17029 putative CheA signal transduction histidine kinases YP_001043559.1 1767354 R 349101 CDS YP_001043560.1 126462446 4896364 complement(1770667..1771071) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_0043 chemotaxis response regulator, CheY6; response regulator receiver protein 1771071 4896364 Rsph17029_1678 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001043560.1 1770667 R 349101 CDS YP_001043561.1 126462447 4896438 complement(1771275..1772978) 1 NC_009049.1 PFAM: chemotaxis sensory transducer; SMART: histidine kinase, HAMP region domain protein; KEGG: rsp:RSP_0044 putative cytoplasmic chemoreceptor, TlpT; methyl-accepting chemotaxis sensory transducer 1772978 4896438 Rsph17029_1679 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001043561.1 1771275 R 349101 CDS YP_001043562.1 126462448 4896441 complement(1772975..1773700) 1 NC_009049.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rsp:RSP_0045 Slp; cobyrinic acid a,c-diamide synthase 1773700 4896441 Rsph17029_1680 Rhodobacter sphaeroides ATCC 17029 cobyrinic acid a,c-diamide synthase YP_001043562.1 1772975 R 349101 CDS YP_001043563.1 126462449 4896500 complement(1773704..1774213) 1 NC_009049.1 PFAM: CheW domain protein; KEGG: rsp:RSP_0046 chemotaxis protein, CheW4; putative CheW protein 1774213 4896500 Rsph17029_1681 Rhodobacter sphaeroides ATCC 17029 putative CheW protein YP_001043563.1 1773704 R 349101 CDS YP_001043564.1 126462450 4896440 complement(1774232..1775329) 1 NC_009049.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rsp:RSP_0047 chemotaxis methylesterase, CheB2; response regulator receiver modulated CheB methylesterase 1775329 4896440 Rsph17029_1682 Rhodobacter sphaeroides ATCC 17029 response regulator receiver modulated CheB methylesterase YP_001043564.1 1774232 R 349101 CDS YP_001043565.1 126462451 4896581 complement(1775329..1776138) 1 NC_009049.1 PFAM: MCP methyltransferase, CheR-type; KEGG: rsp:RSP_0048 MCP methyltransferase, CheR3; protein-glutamate O-methyltransferase 1776138 4896581 Rsph17029_1683 Rhodobacter sphaeroides ATCC 17029 protein-glutamate O-methyltransferase YP_001043565.1 1775329 R 349101 CDS YP_001043566.1 126462452 4896587 complement(1776135..1777334) 1 NC_009049.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; KEGG: rsp:RSP_0049 chemotaxis histidine protein kinase, CheA4; putative CheA signal transduction histidine kinases 1777334 4896587 Rsph17029_1684 Rhodobacter sphaeroides ATCC 17029 putative CheA signal transduction histidine kinases YP_001043566.1 1776135 R 349101 CDS YP_001043567.1 126462453 4896572 complement(1777479..1777784) 1 NC_009049.1 KEGG: rsp:RSP_6091 hypothetical protein; hypothetical protein 1777784 4896572 Rsph17029_1685 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043567.1 1777479 R 349101 CDS YP_001043568.1 126462454 4896602 1778210..1779346 1 NC_009049.1 PFAM: sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; KEGG: rsp:RSP_0051 TorF protein; sigma-54 factor interaction domain-containing protein 1779346 4896602 Rsph17029_1686 Rhodobacter sphaeroides ATCC 17029 sigma-54 factor interaction domain-containing protein YP_001043568.1 1778210 D 349101 CDS YP_001043569.1 126462455 4896634 1779360..1779683 1 NC_009049.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rsp:RSP_0052 flagellar protein FliE; flagellar hook-basal body complex subunit FliE 1779683 4896634 Rsph17029_1687 Rhodobacter sphaeroides ATCC 17029 flagellar hook-basal body complex subunit FliE YP_001043569.1 1779360 D 349101 CDS YP_001043570.1 126462456 4896623 1779703..1781415 1 NC_009049.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; KEGG: rsp:RSP_0053 flagellar FliF M-ring protein; flagellar M-ring protein FliF 1781415 4896623 Rsph17029_1688 Rhodobacter sphaeroides ATCC 17029 flagellar M-ring protein FliF YP_001043570.1 1779703 D 349101 CDS YP_001043571.1 126462457 4896723 1781417..1782439 1 NC_009049.1 PFAM: flagellar motor switch protein FliG; KEGG: rsp:RSP_0054 probable flagellar motor switch protein FliG; flagellar motor switch protein FliG 1782439 4896723 Rsph17029_1689 Rhodobacter sphaeroides ATCC 17029 flagellar motor switch protein FliG YP_001043571.1 1781417 D 349101 CDS YP_001043572.1 126462458 4896728 1782443..1783258 1 NC_009049.1 KEGG: rsp:RSP_0055 flagellar protein FliH; hypothetical protein 1783258 4896728 Rsph17029_1690 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043572.1 1782443 D 349101 CDS YP_001043573.1 126462459 4896699 1783255..1784583 1 NC_009049.1 KEGG: rsp:RSP_0056 FliI, flagellum-specific ATPase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; FliI/YscN family ATPase 1784583 4896699 Rsph17029_1691 Rhodobacter sphaeroides ATCC 17029 FliI/YscN family ATPase YP_001043573.1 1783255 D 349101 CDS YP_001043574.1 126462460 4896780 1784585..1784992 1 NC_009049.1 KEGG: rsp:RSP_0057 flagellar protein FliJ; hypothetical protein 1784992 4896780 Rsph17029_1692 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043574.1 1784585 D 349101 CDS YP_001043575.1 126462461 4896829 1785047..1787158 1 NC_009049.1 PFAM: flagellar hook-length control protein; KEGG: rsp:RSP_0058 FliK, flagellar hook-length control protein; flagellar hook-length control protein 1787158 4896829 Rsph17029_1693 Rhodobacter sphaeroides ATCC 17029 flagellar hook-length control protein YP_001043575.1 1785047 D 349101 CDS YP_001043576.1 126462462 4896813 1787151..1787741 1 NC_009049.1 PFAM: flagellar basal body-associated protein FliL; KEGG: rsp:RSP_0059 flagellar biosynthesis protein, FliL; flagellar basal body-associated protein FliL 1787741 4896813 Rsph17029_1694 Rhodobacter sphaeroides ATCC 17029 flagellar basal body-associated protein FliL YP_001043576.1 1787151 D 349101 CDS YP_001043577.1 126462463 4896763 1787745..1788716 1 NC_009049.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rsp:RSP_0060 flagellar switch protein FliM; surface presentation of antigens (SPOA) protein 1788716 4896763 Rsph17029_1695 Rhodobacter sphaeroides ATCC 17029 surface presentation of antigens (SPOA) protein YP_001043577.1 1787745 D 349101 CDS YP_001043578.1 126462464 4896832 1788873..1789169 1 NC_009049.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rsp:RSP_0061 flagellar motor switch FliN protein; flagellar motor switch protein FliN 1789169 4896832 Rsph17029_1696 Rhodobacter sphaeroides ATCC 17029 flagellar motor switch protein FliN YP_001043578.1 1788873 D 349101 CDS YP_001043579.1 126462465 4896880 1789302..1789559 1 NC_009049.1 KEGG: rsp:RSP_0062 flagellar protein FliO; flagellar protein FliO 1789559 4896880 Rsph17029_1697 Rhodobacter sphaeroides ATCC 17029 flagellar protein FliO YP_001043579.1 1789302 D 349101 CDS YP_001043580.1 126462466 4896928 1789556..1790461 1 NC_009049.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1790461 fliP 4896928 fliP Rhodobacter sphaeroides ATCC 17029 flagellar biosynthesis protein FliP YP_001043580.1 1789556 D 349101 CDS YP_001043581.1 126462467 4896962 1790461..1790727 1 NC_009049.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: rsp:RSP_0064 flagellar protein FliQ; flagellar biosynthetic protein FliQ 1790727 4896962 Rsph17029_1699 Rhodobacter sphaeroides ATCC 17029 flagellar biosynthetic protein FliQ YP_001043581.1 1790461 D 349101 CDS YP_001043582.1 126462468 4896966 1790727..1791536 1 NC_009049.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rsp:RSP_0065 flagellar protein FliR; flagellar biosynthetic protein FliR 1791536 4896966 Rsph17029_1700 Rhodobacter sphaeroides ATCC 17029 flagellar biosynthetic protein FliR YP_001043582.1 1790727 D 349101 CDS YP_001043583.1 126462469 4896981 1791523..1792665 1 NC_009049.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: rsp:RSP_0066 flagellar protein FlhB; flagellar biosynthetic protein FlhB 1792665 4896981 Rsph17029_1701 Rhodobacter sphaeroides ATCC 17029 flagellar biosynthetic protein FlhB YP_001043583.1 1791523 D 349101 CDS YP_001043584.1 126462470 4897147 1792674..1793438 1 NC_009049.1 KEGG: rsp:RSP_0067 hypothetical protein; hypothetical protein 1793438 4897147 Rsph17029_1702 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043584.1 1792674 D 349101 CDS YP_001043585.1 126462471 4897226 1793446..1794114 1 NC_009049.1 KEGG: rsp:RSP_6092 hypothetical protein; hypothetical protein 1794114 4897226 Rsph17029_1703 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043585.1 1793446 D 349101 CDS YP_001043586.1 126462472 4897364 complement(1794121..1795437) 1 NC_009049.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_0068 sigma-54 factor (RpoN2); RNA polymerase sigma 54 subunit RpoN 1795437 4897364 Rsph17029_1704 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma 54 subunit RpoN YP_001043586.1 1794121 R 349101 CDS YP_001043587.1 126462473 4897383 complement(1795631..1797112) 1 NC_009049.1 PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: rsp:RSP_0069 flagellar filament protein; flagellin domain-containing protein 1797112 4897383 Rsph17029_1705 Rhodobacter sphaeroides ATCC 17029 flagellin domain-containing protein YP_001043587.1 1795631 R 349101 CDS YP_001043588.1 126462474 4897440 1797352..1799007 1 NC_009049.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: rsp:RSP_0070 possible flagellar hook-associated protein 2 (filament cap protein); flagellar hook-associated 2 domain-containing protein 1799007 4897440 Rsph17029_1706 Rhodobacter sphaeroides ATCC 17029 flagellar hook-associated 2 domain-containing protein YP_001043588.1 1797352 D 349101 CDS YP_001043589.1 126462475 4897604 complement(1799038..1800138) 1 NC_009049.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_0071 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 1800138 4897604 Rsph17029_1707 Rhodobacter sphaeroides ATCC 17029 sigma-54 dependent trancsriptional regulator YP_001043589.1 1799038 R 349101 CDS YP_001043590.1 126462476 4897627 complement(1800292..1801089) 1 NC_009049.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_0072 possible invasion protein; lytic transglycosylase, catalytic 1801089 4897627 Rsph17029_1708 Rhodobacter sphaeroides ATCC 17029 lytic transglycosylase, catalytic YP_001043590.1 1800292 R 349101 CDS YP_001043591.1 126462477 4897602 complement(1801096..1802325) 1 NC_009049.1 TIGRFAM: flagellar hook-associated protein 3; KEGG: rsp:RSP_0073 flagellar hook-associated protein 3 FlgL; flagellar hook-associated protein 3 1802325 4897602 Rsph17029_1709 Rhodobacter sphaeroides ATCC 17029 flagellar hook-associated protein 3 YP_001043591.1 1801096 R 349101 CDS YP_001043592.1 126462478 4897628 complement(1802333..1806424) 1 NC_009049.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; flagellin hook IN repeat protein; protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_0074 FlgK flagellar hook-associated protein 1; flagellar hook-associated protein FlgK 1806424 4897628 Rsph17029_1710 Rhodobacter sphaeroides ATCC 17029 flagellar hook-associated protein FlgK YP_001043592.1 1802333 R 349101 CDS YP_001043593.1 126462479 4897756 complement(1806532..1806834) 1 NC_009049.1 KEGG: rsp:RSP_6093 flagellar protein FlgJ; flagellar protein FlgJ 1806834 4897756 Rsph17029_1711 Rhodobacter sphaeroides ATCC 17029 flagellar protein FlgJ YP_001043593.1 1806532 R 349101 CDS YP_001043594.1 126462480 4897755 complement(1806834..1807949) 1 NC_009049.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1807949 flgI 4897755 flgI Rhodobacter sphaeroides ATCC 17029 flagellar basal body P-ring protein YP_001043594.1 1806834 R 349101 CDS YP_001043595.1 126462481 4897778 complement(1807946..1808614) 1 NC_009049.1 PFAM: flagellar L-ring protein; KEGG: rsp:RSP_0077 flagellar L-ring protein; flagellar L-ring protein 1808614 4897778 Rsph17029_1713 Rhodobacter sphaeroides ATCC 17029 flagellar L-ring protein YP_001043595.1 1807946 R 349101 CDS YP_001043596.1 126462482 4897776 complement(1808622..1809410) 1 NC_009049.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_0078 flagellar distal rod protein; flagellar basal-body rod protein FlgG 1809410 4897776 Rsph17029_1714 Rhodobacter sphaeroides ATCC 17029 flagellar basal-body rod protein FlgG YP_001043596.1 1808622 R 349101 CDS YP_001043597.1 126462483 4897763 complement(1809463..1810218) 1 NC_009049.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_0079 flagellar proximal rod protein FlgF; hypothetical protein 1810218 4897763 Rsph17029_1715 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043597.1 1809463 R 349101 CDS YP_001043598.1 126462484 4897818 complement(1810227..1811498) 1 NC_009049.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: rsp:RSP_0080 flagellar hook protein FlgE; flagellar basal body FlaE domain-containing protein 1811498 4897818 Rsph17029_1716 Rhodobacter sphaeroides ATCC 17029 flagellar basal body FlaE domain-containing protein YP_001043598.1 1810227 R 349101 CDS YP_001043599.1 126462485 4897809 complement(1811523..1812194) 1 NC_009049.1 PFAM: flagellar hook capping protein; KEGG: rsp:RSP_0081 flagellar scaffolding protein FlgD; flagellar hook capping protein 1812194 4897809 Rsph17029_1717 Rhodobacter sphaeroides ATCC 17029 flagellar hook capping protein YP_001043599.1 1811523 R 349101 CDS YP_001043600.1 126462486 4897760 complement(1812196..1812612) 1 NC_009049.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; KEGG: rsp:RSP_0082 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 1812612 4897760 Rsph17029_1718 Rhodobacter sphaeroides ATCC 17029 flagellar basal-body rod protein FlgC YP_001043600.1 1812196 R 349101 CDS YP_001043601.1 126462487 4897829 complement(1812612..1812998) 1 NC_009049.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: rsp:RSP_0083 flagellar proximal rod protein FlgB; flagellar basal-body rod protein FlgB 1812998 4897829 Rsph17029_1719 Rhodobacter sphaeroides ATCC 17029 flagellar basal-body rod protein FlgB YP_001043601.1 1812612 R 349101 CDS YP_001043602.1 126462488 4897825 1813088..1814245 1 NC_009049.1 KEGG: rsp:RSP_0084 hypothetical protein; hypothetical protein 1814245 4897825 Rsph17029_1720 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043602.1 1813088 D 349101 CDS YP_001043603.1 126462489 4897823 complement(1814526..1817135) 1 NC_009049.1 KEGG: rsp:RSP_0085 multisensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 1817135 4897823 Rsph17029_1721 Rhodobacter sphaeroides ATCC 17029 multi-sensor hybrid histidine kinase YP_001043603.1 1814526 R 349101 CDS YP_001043604.1 126462490 4897895 complement(1817189..1817716) 1 NC_009049.1 KEGG: rsp:RSP_0086 hypothetical protein; hypothetical protein 1817716 4897895 Rsph17029_1722 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043604.1 1817189 R 349101 CDS YP_001043605.1 126462491 4897888 1817911..1818633 1 NC_009049.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_0087 two component transcriptional regulator, LuxR; two component LuxR family transcriptional regulator 1818633 4897888 Rsph17029_1723 Rhodobacter sphaeroides ATCC 17029 two component LuxR family transcriptional regulator YP_001043605.1 1817911 D 349101 CDS YP_001043606.1 126462492 4897875 complement(1818829..1819329) 1 NC_009049.1 PFAM: protein of unknown function DUF892; KEGG: rsp:RSP_0088 YcfI, putative structural proteins; hypothetical protein 1819329 4897875 Rsph17029_1724 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043606.1 1818829 R 349101 CDS YP_001043607.1 126462493 4897957 1819498..1820184 1 NC_009049.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0089 hypothetical protein; HAD family hydrolase 1820184 4897957 Rsph17029_1725 Rhodobacter sphaeroides ATCC 17029 HAD family hydrolase YP_001043607.1 1819498 D 349101 CDS YP_001043608.1 126462494 4897952 1820181..1821134 1 NC_009049.1 PFAM: putative sugar-binding domain protein; KEGG: rsp:RSP_0090 operon regulator SmoC; DeoR family transcriptional regulator 1821134 4897952 Rsph17029_1726 Rhodobacter sphaeroides ATCC 17029 DeoR family transcriptional regulator YP_001043608.1 1820181 D 349101 CDS YP_001043609.1 126462495 4898068 1821242..1822552 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_0091 ABC sorbitol/mannitol transporter, periplasmic binding protein; extracellular solute-binding protein 1822552 4898068 Rsph17029_1727 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043609.1 1821242 D 349101 CDS YP_001043610.1 126462496 4897655 1822654..1823526 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0092 ABC sorbitol/mannitol transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1823526 4897655 Rsph17029_1728 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043610.1 1822654 D 349101 CDS YP_001043611.1 126462497 4896549 1823528..1824358 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0093 ABC sorbitol/mannitol transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1824358 4896549 Rsph17029_1729 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043611.1 1823528 D 349101 CDS YP_001043612.1 126462498 4896316 1824366..1825364 1 NC_009049.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_0094 ABC sorbitol/mannitol transporter, ATPase subunit; ABC transporter 1825364 4896316 Rsph17029_1730 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043612.1 1824366 D 349101 CDS YP_001043613.1 126462499 4897512 1825366..1826136 1 NC_009049.1 Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 1826136 4897512 Rsph17029_1731 Rhodobacter sphaeroides ATCC 17029 sorbitol dehydrogenase YP_001043613.1 1825366 D 349101 CDS YP_001043614.1 126462500 4897676 1826192..1827625 1 NC_009049.1 PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: rsp:RSP_0096 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein 1827625 4897676 Rsph17029_1732 Rhodobacter sphaeroides ATCC 17029 mannitol dehydrogenase domain-containing protein YP_001043614.1 1826192 D 349101 CDS YP_001043615.1 126462501 4897225 1828141..1829238 1 NC_009049.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0097 TRAP-T family sorbitol/mannitol transporter, periplasmic binding protein, SmoM; TRAP dicarboxylate transporter- DctP subunit 1829238 4897225 Rsph17029_1733 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001043615.1 1828141 D 349101 CDS YP_001043616.1 126462502 4896403 complement(1829389..1831437) 1 NC_009049.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_6094 TRAP-T family sorbitol/mannitol transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM 1831437 4896403 Rsph17029_1734 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001043616.1 1829389 R 349101 CDS YP_001043617.1 126462503 4897535 complement(1831434..1832048) 1 NC_009049.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0099 TRAP-T family sorbitol/mannitol transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ 1832048 4897535 Rsph17029_1735 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001043617.1 1831434 R 349101 CDS YP_001043618.1 126462504 4896566 1832437..1832823 1 NC_009049.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: rsp:RSP_0100 putative NADH dehydrogenase I chain A; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1832823 4896566 Rsph17029_1736 Rhodobacter sphaeroides ATCC 17029 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_001043618.1 1832437 D 349101 CDS YP_001043619.1 126462505 4896525 1832820..1833437 1 NC_009049.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1833437 4896525 Rsph17029_1737 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit B YP_001043619.1 1832820 D 349101 CDS YP_001043620.1 126462506 4897132 1833434..1835176 1 NC_009049.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1835176 4897132 Rsph17029_1738 Rhodobacter sphaeroides ATCC 17029 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_001043620.1 1833434 D 349101 CDS YP_001043621.1 126462507 4896916 1835173..1835646 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1835646 4896916 Rsph17029_1739 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit E YP_001043621.1 1835173 D 349101 CDS YP_001043622.1 126462508 4897599 1835643..1836893 1 NC_009049.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rsp:RSP_0104 respiratory-chain NADH dehydrogenase, 51 kDa subunit; NADH dehydrogenase (quinone) 1836893 4897599 Rsph17029_1740 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase (quinone) YP_001043622.1 1835643 D 349101 CDS YP_001043623.1 126462509 4895776 1836890..1839472 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1839472 4895776 Rsph17029_1741 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit G YP_001043623.1 1836890 D 349101 CDS YP_001043624.1 126462510 4896647 1839669..1840625 1 NC_009049.1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: rsp:RSP_0106 putative NADH dehydrogenase I chain H; respiratory-chain NADH dehydrogenase subunit 1 1840625 4896647 Rsph17029_1742 Rhodobacter sphaeroides ATCC 17029 respiratory-chain NADH dehydrogenase subunit 1 YP_001043624.1 1839669 D 349101 CDS YP_001043625.1 126462511 4897273 1840622..1841116 1 NC_009049.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1841116 4897273 Rsph17029_1743 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase subunit I YP_001043625.1 1840622 D 349101 CDS YP_001043626.1 126462512 4896166 1841113..1841607 1 NC_009049.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: rsp:RSP_0108 NADH dehydrogenase I chain J; NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1841607 4896166 Rsph17029_1744 Rhodobacter sphaeroides ATCC 17029 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_001043626.1 1841113 D 349101 CDS YP_001043627.1 126462513 4897120 1841604..1841912 1 NC_009049.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rsp:RSP_0109 putative NADH dehydrogenase I chain K; NADH-ubiquinone oxidoreductase, chain 4L 1841912 4897120 Rsph17029_1745 Rhodobacter sphaeroides ATCC 17029 NADH-ubiquinone oxidoreductase, chain 4L YP_001043627.1 1841604 D 349101 CDS YP_001043628.1 126462514 4897568 1841914..1844016 1 NC_009049.1 KEGG: rsp:RSP_0110 NADH-ubiquinone oxidoreductase, chain 5; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 1844016 4897568 Rsph17029_1746 Rhodobacter sphaeroides ATCC 17029 proton-translocating NADH-quinone oxidoreductase subunit L YP_001043628.1 1841914 D 349101 CDS YP_001043629.1 126462515 4897555 1843995..1845455 1 NC_009049.1 KEGG: rpb:RPB_1358 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1845455 4897555 Rsph17029_1747 Rhodobacter sphaeroides ATCC 17029 proton-translocating NADH-quinone oxidoreductase subunit M YP_001043629.1 1843995 D 349101 CDS YP_001043630.1 126462516 4897554 1845455..1846798 1 NC_009049.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rsp:RSP_0112 NADH-ubiquinone oxidoreductase, chain 4; NADH dehydrogenase (quinone) 1846798 4897554 Rsph17029_1748 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase (quinone) YP_001043630.1 1845455 D 349101 CDS YP_001043631.1 126462517 4897059 1846876..1848327 1 NC_009049.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: rsp:RSP_0113 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 1848327 4897059 Rsph17029_1749 Rhodobacter sphaeroides ATCC 17029 phospholipase D/transphosphatidylase YP_001043631.1 1846876 D 349101 CDS YP_001043632.1 126462518 4895703 1848324..1848668 1 NC_009049.1 KEGG: rsp:RSP_0114 hypothetical protein; hypothetical protein 1848668 4895703 Rsph17029_1750 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043632.1 1848324 D 349101 CDS YP_001043633.1 126462519 4895549 complement(1848690..1849934) 1 NC_009049.1 PFAM: cytochrome c, class I; KEGG: rsp:RSP_0115 class I triheme cytochrome c; cytochrome c, class I 1849934 4895549 Rsph17029_1751 Rhodobacter sphaeroides ATCC 17029 cytochrome c, class I YP_001043633.1 1848690 R 349101 CDS YP_001043634.1 126462520 4896861 complement(1849960..1850367) 1 NC_009049.1 KEGG: rsp:RSP_0116 hypothetical protein; hypothetical protein 1850367 4896861 Rsph17029_1752 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043634.1 1849960 R 349101 CDS YP_001043635.1 126462521 4896449 complement(1850378..1852951) 1 NC_009049.1 PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_0117 cytochrome c oxidase, subunit I; cytochrome-c oxidase 1852951 4896449 Rsph17029_1753 Rhodobacter sphaeroides ATCC 17029 cytochrome-c oxidase YP_001043635.1 1850378 R 349101 CDS YP_001043636.1 126462522 4896495 complement(1852948..1853922) 1 NC_009049.1 TIGRFAM: cytochrome c, monohaem; PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; KEGG: rsp:RSP_0118 cytochrome c oxidase, subunit IIc; cytochrome c, monoheme 1853922 4896495 Rsph17029_1754 Rhodobacter sphaeroides ATCC 17029 cytochrome c, monoheme YP_001043636.1 1852948 R 349101 CDS YP_001043637.1 126462523 4896735 complement(1854244..1855014) 1 NC_009049.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: rsp:RSP_0119 PA-phosphatase related phosphoesterase; PA-phosphatase-like phosphoesterase 1855014 4896735 Rsph17029_1755 Rhodobacter sphaeroides ATCC 17029 PA-phosphatase-like phosphoesterase YP_001043637.1 1854244 R 349101 CDS YP_001043638.1 126462524 4896410 complement(1855267..1855749) 1 NC_009049.1 PFAM: Autoinducer-binding domain protein; KEGG: rsp:RSP_6095 possible transcriptional activator; autoinducer-binding domain-containing protein 1855749 4896410 Rsph17029_1756 Rhodobacter sphaeroides ATCC 17029 autoinducer-binding domain-containing protein YP_001043638.1 1855267 R 349101 CDS YP_001043639.1 126462525 4897117 1855797..1856456 1 NC_009049.1 PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: rsp:RSP_6096 transcriptional regulator, LuxR family; response regulator receiver protein 1856456 4897117 Rsph17029_1757 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001043639.1 1855797 D 349101 CDS YP_001043640.1 126462526 4896830 1856567..1857268 1 NC_009049.1 PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; Bacterio-opsin activator, HTH domain protein; KEGG: rsp:RSP_0122 transcriptional regulator, LuxR family; autoinducer-binding domain-containing protein 1857268 4896830 Rsph17029_1758 Rhodobacter sphaeroides ATCC 17029 autoinducer-binding domain-containing protein YP_001043640.1 1856567 D 349101 CDS YP_001043641.1 126462527 4896148 1857290..1857448 1 NC_009049.1 KEGG: rsp:RSP_6213 community escape response protein; community escape response protein 1857448 4896148 Rsph17029_1759 Rhodobacter sphaeroides ATCC 17029 community escape response protein YP_001043641.1 1857290 D 349101 CDS YP_001043642.1 126462528 4896993 1857445..1858077 1 NC_009049.1 PFAM: autoinducer synthesis protein; KEGG: rsp:RSP_0123 autoinducer synthesis protein; autoinducer synthesis protein 1858077 4896993 Rsph17029_1760 Rhodobacter sphaeroides ATCC 17029 autoinducer synthesis protein YP_001043642.1 1857445 D 349101 CDS YP_001043643.1 126462529 4896494 1858185..1858457 1 NC_009049.1 KEGG: rsp:RSP_0124 hypothetical protein; hypothetical protein 1858457 4896494 Rsph17029_1761 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043643.1 1858185 D 349101 CDS YP_001043644.1 126462530 4895714 1858778..1860400 1 NC_009049.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1860400 mdoG 4895714 mdoG Rhodobacter sphaeroides ATCC 17029 glucan biosynthesis protein G YP_001043644.1 1858778 D 349101 CDS YP_001043645.1 126462531 4895504 1860400..1860600 1 NC_009049.1 KEGG: rsp:RSP_0126 hypothetical protein; hypothetical protein 1860600 4895504 Rsph17029_1763 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043645.1 1860400 D 349101 CDS YP_001043646.1 126462532 4896422 1860604..1862391 1 NC_009049.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 1862391 4896422 Rsph17029_1764 Rhodobacter sphaeroides ATCC 17029 glucosyltransferase MdoH YP_001043646.1 1860604 D 349101 CDS YP_001043647.1 126462533 4897853 1862384..1863583 1 NC_009049.1 KEGG: rsp:RSP_0128 OpgC protein; OpgC protein 1863583 4897853 Rsph17029_1765 Rhodobacter sphaeroides ATCC 17029 OpgC protein YP_001043647.1 1862384 D 349101 CDS YP_001043648.1 126462534 4897325 1864108..1865169 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0129 ABC D-methionine uptake transporter, ATPase subunit; ABC transporter 1865169 4897325 Rsph17029_1766 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043648.1 1864108 D 349101 CDS YP_001043649.1 126462535 4897022 1865159..1865833 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0130 ABC D-methionine uptake transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1865833 4897022 Rsph17029_1767 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043649.1 1865159 D 349101 CDS YP_001043650.1 126462536 4896467 1865862..1866638 1 NC_009049.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rsp:RSP_0132 ABC D-methionine uptake transporter, substrate-binding protein; YaeC family lipoprotein 1866638 4896467 Rsph17029_1768 Rhodobacter sphaeroides ATCC 17029 YaeC family lipoprotein YP_001043650.1 1865862 D 349101 CDS YP_001043651.1 126462537 4895167 1866874..1868364 1 NC_009049.1 PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: rsp:RSP_0133 Na+/H+ antiporter, NhaC family; Na+/H+ antiporter NhaC 1868364 4895167 Rsph17029_1769 Rhodobacter sphaeroides ATCC 17029 Na+/H+ antiporter NhaC YP_001043651.1 1866874 D 349101 CDS YP_001043652.1 126462538 4895326 complement(1868417..1868695) 1 NC_009049.1 hypothetical protein 1868695 4895326 Rsph17029_1770 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043652.1 1868417 R 349101 CDS YP_001043653.1 126462539 4895920 1870099..1870506 1 NC_009049.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1870506 rpsF 4895920 rpsF Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S6 YP_001043653.1 1870099 D 349101 CDS YP_001043654.1 126462540 4896557 1870527..1870754 1 NC_009049.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1870754 rpsR 4896557 rpsR Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S18 YP_001043654.1 1870527 D 349101 CDS YP_001043655.1 126462541 4895932 1870767..1871336 1 NC_009049.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1871336 rplI 4895932 rplI Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L9 YP_001043655.1 1870767 D 349101 CDS YP_001043656.1 126462542 4896488 complement(1871659..1872993) 1 NC_009049.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1872993 tig 4896488 tig Rhodobacter sphaeroides ATCC 17029 trigger factor YP_001043656.1 1871659 R 349101 CDS YP_001043657.1 126462543 4896805 1873301..1873771 1 NC_009049.1 KEGG: rsp:RSP_6097 hypothetical protein; hypothetical protein 1873771 4896805 Rsph17029_1776 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043657.1 1873301 D 349101 CDS YP_001043658.1 126462544 4896875 1875541..1875879 1 NC_009049.1 PFAM: nitrogen regulatory protein P-II; KEGG: rsp:RSP_0146 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1875879 4896875 Rsph17029_1779 Rhodobacter sphaeroides ATCC 17029 nitrogen regulatory protein P-II YP_001043658.1 1875541 D 349101 CDS YP_001043659.1 126462545 4897236 1875961..1877370 1 NC_009049.1 KEGG: rsp:RSP_0147 glutamine synthetase class-I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I 1877370 4897236 Rsph17029_1780 Rhodobacter sphaeroides ATCC 17029 glutamine synthetase, type I YP_001043659.1 1875961 D 349101 CDS YP_001043660.1 126462546 4897267 complement(1877563..1878615) 1 NC_009049.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_0148 signal transduction histidine kinase; signal transduction histidine kinase 1878615 4897267 Rsph17029_1781 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase YP_001043660.1 1877563 R 349101 CDS YP_001043661.1 126462547 4897354 complement(1878612..1879049) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_0149 CheY-like receiver protein; response regulator receiver protein 1879049 4897354 Rsph17029_1782 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001043661.1 1878612 R 349101 CDS YP_001043662.1 126462548 4897036 complement(1879046..1880530) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: rsp:RSP_0150 CHASE sensor signal transducdtion histidine kinase; multi-sensor signal transduction histidine kinase 1880530 4897036 Rsph17029_1783 Rhodobacter sphaeroides ATCC 17029 multi-sensor signal transduction histidine kinase YP_001043662.1 1879046 R 349101 CDS YP_001043663.1 126462549 4897546 1880847..1881965 1 NC_009049.1 PFAM: ATPase associated with various cellular activities, AAA_3; SMART: AAA ATPase; KEGG: rsp:RSP_0152 P-loop ATPase; ATPase 1881965 4897546 Rsph17029_1784 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001043663.1 1880847 D 349101 CDS YP_001043664.1 126462550 4895452 1881962..1883272 1 NC_009049.1 KEGG: rsp:RSP_0151 hypothetical protein; hypothetical protein 1883272 4895452 Rsph17029_1785 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043664.1 1881962 D 349101 CDS YP_001043665.1 126462551 4895438 complement(1883475..1884152) 1 NC_009049.1 KEGG: rsp:RSP_0153 hypothetical protein; hypothetical protein 1884152 4895438 Rsph17029_1786 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043665.1 1883475 R 349101 CDS YP_001043666.1 126462552 4897934 complement(1884299..1885171) 1 NC_009049.1 KEGG: rsp:RSP_0154 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 1885171 4897934 Rsph17029_1787 Rhodobacter sphaeroides ATCC 17029 3-hydroxyisobutyrate dehydrogenase YP_001043666.1 1884299 R 349101 CDS YP_001043667.1 126462553 4897479 complement(1885168..1886199) 1 NC_009049.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rsp:RSP_0155 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1886199 4897479 Rsph17029_1788 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase/isomerase YP_001043667.1 1885168 R 349101 CDS YP_001043668.1 126462554 4897001 complement(1886196..1887335) 1 NC_009049.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_0156 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1887335 4897001 Rsph17029_1789 Rhodobacter sphaeroides ATCC 17029 acyl-CoA dehydrogenase domain-containing protein YP_001043668.1 1886196 R 349101 CDS YP_001043669.1 126462555 4896919 complement(1887459..1887752) 1 NC_009049.1 KEGG: rsp:RSP_6098 hypothetical protein; hypothetical protein 1887752 4896919 Rsph17029_1790 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043669.1 1887459 R 349101 CDS YP_001043670.1 126462556 4896705 complement(1887960..1888868) 1 NC_009049.1 KEGG: rsp:RSP_0157 beta-mannanase; beta-mannanase 1888868 4896705 Rsph17029_1791 Rhodobacter sphaeroides ATCC 17029 beta-mannanase YP_001043670.1 1887960 R 349101 CDS YP_001043671.1 126462557 4896610 complement(1888873..1890756) 1 NC_009049.1 KEGG: rsp:RSP_0158 cellulose synthase-like protein; cellulose synthase-like protein 1890756 4896610 Rsph17029_1792 Rhodobacter sphaeroides ATCC 17029 cellulose synthase-like protein YP_001043671.1 1888873 R 349101 CDS YP_001043672.1 126462558 4896563 complement(1890740..1891732) 1 NC_009049.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0159 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1891732 4896563 Rsph17029_1793 Rhodobacter sphaeroides ATCC 17029 UDP-glucose 4-epimerase YP_001043672.1 1890740 R 349101 CDS YP_001043673.1 126462559 4896379 complement(1891725..1892762) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0160 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 1892762 4896379 Rsph17029_1794 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001043673.1 1891725 R 349101 CDS YP_001043674.1 126462560 4895874 1893624..1894724 1 NC_009049.1 KEGG: rsp:RSP_0161 spermidine/putrescine-binding periplasmic protein; spermidine/putrescine-binding periplasmic protein 1894724 4895874 Rsph17029_1795 Rhodobacter sphaeroides ATCC 17029 spermidine/putrescine-binding periplasmic protein YP_001043674.1 1893624 D 349101 CDS YP_001043675.1 126462561 4895687 1894841..1895032 1 NC_009049.1 KEGG: rsp:RSP_0162 hypothetical protein; hypothetical protein 1895032 4895687 Rsph17029_1796 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043675.1 1894841 D 349101 CDS YP_001043676.1 126462562 4895626 complement(1895103..1896776) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0163 putative iron(III) ABC transporter, fused inner membrane subunits; binding-protein-dependent transport system inner membrane protein 1896776 4895626 Rsph17029_1797 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043676.1 1895103 R 349101 CDS YP_001043677.1 126462563 4895503 complement(1896929..1897183) 1 NC_009049.1 KEGG: rsp:RSP_0164 hypothetical protein; hypothetical protein 1897183 4895503 Rsph17029_1798 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043677.1 1896929 R 349101 CDS YP_001043678.1 126462564 4895194 1897320..1897535 1 NC_009049.1 KEGG: rsp:RSP_0165 hypothetical protein; hypothetical protein 1897535 4895194 Rsph17029_1799 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043678.1 1897320 D 349101 CDS YP_001043679.1 126462565 4897610 complement(1897942..1898259) 1 NC_009049.1 KEGG: rsp:RSP_0166 DnaK suppressor protein; TraR/DksA family transcriptional regulator 1898259 4897610 Rsph17029_1800 Rhodobacter sphaeroides ATCC 17029 TraR/DksA family transcriptional regulator YP_001043679.1 1897942 R 349101 CDS YP_001043680.1 126462566 4896271 1898585..1899016 1 NC_009049.1 PFAM: protein of unknown function DUF442; KEGG: rsp:RSP_0167 hypothetical protein; hypothetical protein 1899016 4896271 Rsph17029_1801 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043680.1 1898585 D 349101 CDS YP_001043681.1 126462567 4896265 complement(1899277..1900248) 1 NC_009049.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: rsp:RSP_6099 possible flagellar switch protein FliM; surface presentation of antigens (SPOA) protein 1900248 4896265 Rsph17029_1802 Rhodobacter sphaeroides ATCC 17029 surface presentation of antigens (SPOA) protein YP_001043681.1 1899277 R 349101 CDS YP_001043682.1 126462568 4895916 complement(1900373..1903057) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_0169 Na+/solute symporter; integral membrane sensor signal transduction histidine kinase 1903057 4895916 Rsph17029_1803 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001043682.1 1900373 R 349101 CDS YP_001043683.1 126462569 4896172 complement(1903057..1903347) 1 NC_009049.1 KEGG: rsp:RSP_0170 hypothetical protein; hypothetical protein 1903347 4896172 Rsph17029_1804 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043683.1 1903057 R 349101 CDS YP_001043684.1 126462570 4897646 complement(1903344..1903712) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_0171 response regulator receiver protein; response regulator receiver protein 1903712 4897646 Rsph17029_1805 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001043684.1 1903344 R 349101 CDS YP_001043685.1 126462571 4897265 complement(1903874..1905160) 1 NC_009049.1 PFAM: helix-turn-helix domain protein; KEGG: rsp:RSP_0172 predicted transcriptional regulators; helix-turn-helix domain-containing protein 1905160 4897265 Rsph17029_1806 Rhodobacter sphaeroides ATCC 17029 helix-turn-helix domain-containing protein YP_001043685.1 1903874 R 349101 CDS YP_001043686.1 126462572 4895227 complement(1905297..1906142) 1 NC_009049.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rsp:RSP_0173 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1906142 4895227 Rsph17029_1807 Rhodobacter sphaeroides ATCC 17029 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001043686.1 1905297 R 349101 CDS YP_001043687.1 126462573 4895702 complement(1906152..1906892) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_0174 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1906892 4895702 Rsph17029_1808 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001043687.1 1906152 R 349101 CDS YP_001043688.1 126462574 4896249 1907085..1908026 1 NC_009049.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_0175 lactate dehydrogenase and related dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 1908026 4896249 Rsph17029_1809 Rhodobacter sphaeroides ATCC 17029 D-isomer specific 2-hydroxyacid dehydrogenase YP_001043688.1 1907085 D 349101 CDS YP_001043689.1 126462575 4896032 complement(1908063..1909844) 1 NC_009049.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 1909844 4896032 Rsph17029_1810 Rhodobacter sphaeroides ATCC 17029 dihydroxy-acid dehydratase YP_001043689.1 1908063 R 349101 CDS YP_001043690.1 126462576 4896588 1910308..1911690 1 NC_009049.1 PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_0177 FAD/FMN-containing dehydrogenase; FAD linked oxidase domain-containing protein 1911690 4896588 Rsph17029_1811 Rhodobacter sphaeroides ATCC 17029 FAD linked oxidase domain-containing protein YP_001043690.1 1910308 D 349101 CDS YP_001043691.1 126462577 4896912 complement(1911735..1912715) 1 NC_009049.1 KEGG: rsp:RSP_0179 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA 1912715 4896912 Rsph17029_1812 Rhodobacter sphaeroides ATCC 17029 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA YP_001043691.1 1911735 R 349101 CDS YP_001043692.1 126462578 4896811 complement(1912745..1913596) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0180 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1913596 4896811 Rsph17029_1813 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043692.1 1912745 R 349101 CDS YP_001043693.1 126462579 4895349 complement(1913593..1914456) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0181 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1914456 4895349 Rsph17029_1814 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043693.1 1913593 R 349101 CDS YP_001043694.1 126462580 4895508 complement(1914637..1915437) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPO1785 ABC transporter, ATP-binding protein; ABC transporter 1915437 4895508 Rsph17029_1815 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043694.1 1914637 R 349101 CDS YP_001043695.1 126462581 4895492 complement(1915437..1916888) 1 NC_009049.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 1916888 4895492 Rsph17029_1816 Rhodobacter sphaeroides ATCC 17029 phenylhydantoinase YP_001043695.1 1915437 R 349101 CDS YP_001043696.1 126462582 4897355 complement(1917017..1918276) 1 NC_009049.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1918276 4897355 Rsph17029_1817 Rhodobacter sphaeroides ATCC 17029 allantoate amidohydrolase YP_001043696.1 1917017 R 349101 CDS YP_001043697.1 126462583 4897083 1918414..1919046 1 NC_009049.1 PFAM: regulatory protein, TetR; Tetracycline transcriptional regulator YcdC, C-terminal domain protein; KEGG: rsp:RSP_0185 transcriptional regulator, TetR family; TetR family transcriptional regulator 1919046 4897083 Rsph17029_1818 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001043697.1 1918414 D 349101 CDS YP_001043698.1 126462584 4896892 1919236..1919847 1 NC_009049.1 PFAM: regulatory protein, TetR; Tetracycline transcriptional regulator YcdC, C-terminal domain protein; KEGG: rsp:RSP_0186 transcriptional regulator, TetR family; TetR family transcriptional regulator 1919847 4896892 Rsph17029_1819 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001043698.1 1919236 D 349101 CDS YP_001043699.1 126462585 4896415 complement(1919888..1921192) 1 NC_009049.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 1921192 4896415 Rsph17029_1820 Rhodobacter sphaeroides ATCC 17029 dihydropyrimidine dehydrogenase YP_001043699.1 1919888 R 349101 CDS YP_001043700.1 126462586 4895858 complement(1921265..1921804) 1 NC_009049.1 KEGG: rsp:RSP_0188 uncharacterized membrane-associated protein; hypothetical protein 1921804 4895858 Rsph17029_1821 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043700.1 1921265 R 349101 CDS YP_001043701.1 126462587 4895352 complement(1921868..1923199) 1 NC_009049.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1923199 gltD 4895352 gltD Rhodobacter sphaeroides ATCC 17029 glutamate synthase subunit beta YP_001043701.1 1921868 R 349101 CDS YP_001043702.1 126462588 4895268 1923477..1923971 1 NC_009049.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rsp:RSP_0190 biotin carboxyl carrier protein, AccB; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1923971 4895268 Rsph17029_1823 Rhodobacter sphaeroides ATCC 17029 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001043702.1 1923477 D 349101 CDS YP_001043703.1 126462589 4895274 1923979..1925325 1 NC_009049.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1925325 4895274 Rsph17029_1824 Rhodobacter sphaeroides ATCC 17029 acetyl-CoA carboxylase biotin carboxylase subunit YP_001043703.1 1923979 D 349101 CDS YP_001043704.1 126462590 4895392 1925345..1925989 1 NC_009049.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1925989 aat 4895392 aat Rhodobacter sphaeroides ATCC 17029 leucyl/phenylalanyl-tRNA--protein transferase YP_001043704.1 1925345 D 349101 CDS YP_001043705.1 126462591 4896471 complement(1925938..1926309) 1 NC_009049.1 KEGG: rsp:RSP_0193 hypothetical protein; hypothetical protein 1926309 4896471 Rsph17029_1826 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043705.1 1925938 R 349101 CDS YP_001043706.1 126462592 4895809 complement(1926306..1926776) 1 NC_009049.1 PFAM: Mammalian cell entry related domain protein; KEGG: rsp:RSP_0194 possible ABC transporter, substrate-binding protein; hypothetical protein 1926776 4895809 Rsph17029_1827 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043706.1 1926306 R 349101 CDS YP_001043707.1 126462593 4896367 complement(1926776..1927150) 1 NC_009049.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 1927150 4896367 Rsph17029_1828 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase YP_001043707.1 1926776 R 349101 CDS YP_001043708.1 126462594 4896905 complement(1927275..1928540) 1 NC_009049.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1928540 clpX 4896905 clpX Rhodobacter sphaeroides ATCC 17029 ATP-dependent protease ATP-binding subunit ClpX YP_001043708.1 1927275 R 349101 CDS YP_001043709.1 126462595 4896970 complement(1928665..1929297) 1 NC_009049.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1929297 clpP 4896970 clpP Rhodobacter sphaeroides ATCC 17029 ATP-dependent Clp protease proteolytic subunit YP_001043709.1 1928665 R 349101 CDS YP_001043710.1 126462596 4897300 complement(1929464..1930072) 1 NC_009049.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_0198 phosphatidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase 1930072 4897300 Rsph17029_1831 Rhodobacter sphaeroides ATCC 17029 CDP-alcohol phosphatidyltransferase YP_001043710.1 1929464 R 349101 CDS YP_001043711.1 126462597 4895300 1930187..1931392 1 NC_009049.1 KEGG: rsp:RSP_0200 ABC transporter, periplasmic binding protein; putative ABC transporter solute-binding protein 1931392 4895300 Rsph17029_1832 Rhodobacter sphaeroides ATCC 17029 putative ABC transporter solute-binding protein YP_001043711.1 1930187 D 349101 CDS YP_001043712.1 126462598 4895577 1931389..1933077 1 NC_009049.1 KEGG: rsp:RSP_0201 ABC transporter, fused inner membrane subunits; ABC transporter inner membrane protein 1933077 4895577 Rsph17029_1833 Rhodobacter sphaeroides ATCC 17029 ABC transporter inner membrane protein YP_001043712.1 1931389 D 349101 CDS YP_001043713.1 126462599 4895225 1933074..1933718 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_6101 ABC transporter, ATPase subunit; ABC transporter 1933718 4895225 Rsph17029_1834 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043713.1 1933074 D 349101 CDS YP_001043714.1 126462600 4896603 1933851..1934321 1 NC_009049.1 PFAM: Allergen V5/Tpx-1 family protein; KEGG: rsp:RSP_0202 hypothetical protein; Allergen V5/Tpx-1 family protein 1934321 4896603 Rsph17029_1835 Rhodobacter sphaeroides ATCC 17029 Allergen V5/Tpx-1 family protein YP_001043714.1 1933851 D 349101 CDS YP_001043715.1 126462601 4896898 complement(1934398..1935717) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_0203 signal transduction kinase protein; integral membrane sensor signal transduction histidine kinase 1935717 4896898 Rsph17029_1836 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001043715.1 1934398 R 349101 CDS YP_001043716.1 126462602 4896600 1935758..1936669 1 NC_009049.1 PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_0204 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1936669 4896600 Rsph17029_1837 Rhodobacter sphaeroides ATCC 17029 beta-lactamase domain-containing protein YP_001043716.1 1935758 D 349101 CDS YP_001043717.1 126462603 4896465 complement(1937182..1939245) 1 NC_009049.1 PFAM: chemotaxis sensory transducer; KEGG: rsp:RSP_0218 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1939245 4896465 Rsph17029_1839 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001043717.1 1937182 R 349101 CDS YP_001043718.1 126462604 4896219 complement(1939830..1940261) 1 NC_009049.1 KEGG: rsp:RSP_4165 transposase IS66; transposase IS66 1940261 4896219 Rsph17029_1840 Rhodobacter sphaeroides ATCC 17029 transposase IS66 YP_001043718.1 1939830 R 349101 CDS YP_001043719.1 126462605 4896407 complement(1940515..1940856) 1 NC_009049.1 KEGG: rsp:RSP_3313 possible phage integrase family protein; putative phage integrase family protein 1940856 4896407 Rsph17029_1842 Rhodobacter sphaeroides ATCC 17029 putative phage integrase family protein YP_001043719.1 1940515 R 349101 CDS YP_001043720.1 126462606 4897184 1941635..1942522 1 NC_009049.1 KEGG: nar:Saro_2176 hypothetical protein; hypothetical protein 1942522 4897184 Rsph17029_1844 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043720.1 1941635 D 349101 CDS YP_001043721.1 126462607 4897108 1942589..1944514 1 NC_009049.1 PFAM: protein of unknown function DUF262; KEGG: rha:RHA1_ro01680 hypothetical protein; hypothetical protein 1944514 4897108 Rsph17029_1845 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043721.1 1942589 D 349101 CDS YP_001043722.1 126462608 4897145 1944598..1948110 1 NC_009049.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rpa:RPA2218 possible ATP-dependent RNA helicase; helicase domain-containing protein 1948110 4897145 Rsph17029_1846 Rhodobacter sphaeroides ATCC 17029 helicase domain-containing protein YP_001043722.1 1944598 D 349101 CDS YP_001043723.1 126462609 4895305 1948115..1948543 1 NC_009049.1 KEGG: bmb:BruAb1_0743 transcriptional regulator, Cro/CI family; hypothetical protein 1948543 4895305 Rsph17029_1847 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043723.1 1948115 D 349101 CDS YP_001043724.1 126462610 4897233 1948540..1951446 1 NC_009049.1 PFAM: protein of unknown function DUF1156; KEGG: rpa:RPA2220 putative DNA methylase; hypothetical protein 1951446 4897233 Rsph17029_1848 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043724.1 1948540 D 349101 CDS YP_001043725.1 126462611 4897601 1951458..1954754 1 NC_009049.1 KEGG: rpa:RPA2221 hypothetical protein; hypothetical protein 1954754 4897601 Rsph17029_1849 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043725.1 1951458 D 349101 CDS YP_001043726.1 126462612 4897146 complement(1955692..1955949) 1 NC_009049.1 hypothetical protein 1955949 4897146 Rsph17029_1850 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043726.1 1955692 R 349101 CDS YP_001043727.1 126462613 4895393 complement(1955946..1956620) 1 NC_009049.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: sil:SPO3675 hypothetical protein; peptidase M15A 1956620 4895393 Rsph17029_1851 Rhodobacter sphaeroides ATCC 17029 peptidase M15A YP_001043727.1 1955946 R 349101 CDS YP_001043728.1 126462614 4895282 complement(1956693..1956947) 1 NC_009049.1 KEGG: nwi:Nwi_1946 probable transmembrane protein; putative transmembrane protein 1956947 4895282 Rsph17029_1852 Rhodobacter sphaeroides ATCC 17029 putative transmembrane protein YP_001043728.1 1956693 R 349101 CDS YP_001043729.1 126462615 4897550 1957008..1957670 1 NC_009049.1 KEGG: eba:ebA806 hypothetical protein; hypothetical protein 1957670 4897550 Rsph17029_1853 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043729.1 1957008 D 349101 CDS YP_001043730.1 126462616 4897141 complement(1957838..1958782) 1 NC_009049.1 KEGG: rxy:Rxyl_0343 methyltransferase type 12; type 12 methyltransferase 1958782 4897141 Rsph17029_1854 Rhodobacter sphaeroides ATCC 17029 type 12 methyltransferase YP_001043730.1 1957838 R 349101 CDS YP_001043731.1 126462617 4896196 complement(1958793..1959464) 1 NC_009049.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: cph:Cpha266_2236 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 1959464 4896196 Rsph17029_1855 Rhodobacter sphaeroides ATCC 17029 uracil-DNA glycosylase superfamily protein YP_001043731.1 1958793 R 349101 CDS YP_001043732.1 126462618 4897078 complement(1959464..1960120) 1 NC_009049.1 KEGG: aeh:Mlg_0506 hypothetical protein; hypothetical protein 1960120 4897078 Rsph17029_1856 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043732.1 1959464 R 349101 CDS YP_001043733.1 126462619 4897679 1960316..1962151 1 NC_009049.1 PFAM: N-6 DNA methylase; KEGG: ccr:CC0620 type I restriction-modification system, M subunit, putative; N-6 DNA methylase 1962151 4897679 Rsph17029_1857 Rhodobacter sphaeroides ATCC 17029 N-6 DNA methylase YP_001043733.1 1960316 D 349101 CDS YP_001043734.1 126462620 4897276 1962148..1963518 1 NC_009049.1 PFAM: restriction modification system DNA specificity domain; KEGG: syc:syc0484_c type I restriction-modification; restriction modification system DNA specificity subunit 1963518 4897276 Rsph17029_1858 Rhodobacter sphaeroides ATCC 17029 restriction modification system DNA specificity subunit YP_001043734.1 1962148 D 349101 CDS YP_001043735.1 126462621 4896845 1963520..1966621 1 NC_009049.1 PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; KEGG: bps:BPSL0945 type I restriction enzyme, R subunit; hypothetical protein 1966621 4896845 Rsph17029_1859 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043735.1 1963520 D 349101 CDS YP_001043736.1 126462622 4896733 1966658..1967323 1 NC_009049.1 hypothetical protein 1967323 4896733 Rsph17029_1860 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043736.1 1966658 D 349101 CDS YP_001043737.1 126462623 4896537 1967320..1967655 1 NC_009049.1 KEGG: mlo:mlr6150 transposase; hypothetical protein 1967655 4896537 Rsph17029_1861 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043737.1 1967320 D 349101 CDS YP_001043738.1 126462624 4897018 1967738..1968238 1 NC_009049.1 hypothetical protein 1968238 4897018 Rsph17029_1862 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043738.1 1967738 D 349101 CDS YP_001043739.1 126462625 4895403 1968391..1969797 1 NC_009049.1 KEGG: sil:SPO1237 hypothetical protein; hypothetical protein 1969797 4895403 Rsph17029_1863 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043739.1 1968391 D 349101 CDS YP_001043740.1 126462626 4897326 1969977..1971023 1 NC_009049.1 PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 1971023 4897326 Rsph17029_1864 Rhodobacter sphaeroides ATCC 17029 integrase catalytic subunit YP_001043740.1 1969977 D 349101 CDS YP_001043741.1 126462627 4895279 1971598..1972275 1 NC_009049.1 KEGG: pfl:PFL_3336 hypothetical protein; hypothetical protein 1972275 4895279 Rsph17029_1865 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043741.1 1971598 D 349101 CDS YP_001043742.1 126462628 4895840 1972682..1973554 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1649 possible transporter, DMT superfamily; hypothetical protein 1973554 4895840 Rsph17029_1866 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043742.1 1972682 D 349101 CDS YP_001043743.1 126462629 4896599 complement(1975887..1976333) 1 NC_009049.1 KEGG: rsp:RSP_6104 calcium-binding protein; calcium-binding protein 1976333 4896599 Rsph17029_1867 Rhodobacter sphaeroides ATCC 17029 calcium-binding protein YP_001043743.1 1975887 R 349101 CDS YP_001043744.1 126462630 4896235 1976665..1977714 1 NC_009049.1 PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; FAE1/Type III polyketide synthase-like protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: rsp:RSP_0226 naringenin-chalcone synthase; chalcone/stilbene synthase domain-containing protein 1977714 4896235 Rsph17029_1868 Rhodobacter sphaeroides ATCC 17029 chalcone/stilbene synthase domain-containing protein YP_001043744.1 1976665 D 349101 CDS YP_001043745.1 126462631 4896942 1977711..1978214 1 NC_009049.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rsp:RSP_0227 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 1978214 4896942 Rsph17029_1869 Rhodobacter sphaeroides ATCC 17029 isoprenylcysteine carboxyl methyltransferase YP_001043745.1 1977711 D 349101 CDS YP_001043746.1 126462632 4897724 1978201..1979799 1 NC_009049.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_0229 multidrug efflux pump, MF superfamily; EmrB/QacA family drug resistance transporter 1979799 4897724 Rsph17029_1870 Rhodobacter sphaeroides ATCC 17029 EmrB/QacA family drug resistance transporter YP_001043746.1 1978201 D 349101 CDS YP_001043747.1 126462633 4897889 complement(1979747..1980700) 1 NC_009049.1 KEGG: rsp:RSP_0228 putative hemin transport protein; putative hemin transport protein 1980700 4897889 Rsph17029_1871 Rhodobacter sphaeroides ATCC 17029 putative hemin transport protein YP_001043747.1 1979747 R 349101 CDS YP_001043748.1 126462634 4895193 complement(1980787..1982382) 1 NC_009049.1 KEGG: rsp:RSP_0230 neutral zinc metallopeptidase; PFAM: Hemolysin-type calcium-binding region; Peptidase M10, serralysin-like; SMART: peptidase, metallopeptidases; serralysin 1982382 4895193 Rsph17029_1872 Rhodobacter sphaeroides ATCC 17029 serralysin YP_001043748.1 1980787 R 349101 CDS YP_001043749.1 126462635 4896046 complement(1982415..1982822) 1 NC_009049.1 KEGG: rsp:RSP_6105 hypothetical protein; hypothetical protein 1982822 4896046 Rsph17029_1873 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043749.1 1982415 R 349101 CDS YP_001043750.1 126462636 4896597 complement(1982960..1984060) 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_0231 flagellar MotB protein; OmpA/MotB domain-containing protein 1984060 4896597 Rsph17029_1874 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001043750.1 1982960 R 349101 CDS YP_001043751.1 126462637 4895937 complement(1984070..1984831) 1 NC_009049.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rsp:RSP_0233 flagellar motor protein MotA; MotA/TolQ/ExbB proton channel 1984831 4895937 Rsph17029_1875 Rhodobacter sphaeroides ATCC 17029 MotA/TolQ/ExbB proton channel YP_001043751.1 1984070 R 349101 CDS YP_001043752.1 126462638 4895444 complement(1985342..1986454) 1 NC_009049.1 PFAM: chemotaxis sensory transducer; KEGG: rsp:RSP_0234 TlpL, putative cytoplasmic chemoreceptor; methyl-accepting chemotaxis sensory transducer 1986454 4895444 Rsph17029_1876 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001043752.1 1985342 R 349101 CDS YP_001043753.1 126462639 4896616 complement(1986856..1987290) 1 NC_009049.1 KEGG: rsp:RSP_6106 hypothetical protein; hypothetical protein 1987290 4896616 Rsph17029_1877 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043753.1 1986856 R 349101 CDS YP_001043754.1 126462640 4897268 1987344..1988411 1 NC_009049.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1988411 moaA 4897268 moaA Rhodobacter sphaeroides ATCC 17029 molybdenum cofactor biosynthesis protein A YP_001043754.1 1987344 D 349101 CDS YP_001043755.1 126462641 4896189 complement(1988704..1990047) 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0236 AgaE protein; FAD dependent oxidoreductase 1990047 4896189 Rsph17029_1879 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001043755.1 1988704 R 349101 CDS YP_001043756.1 126462642 4895255 complement(1990047..1991210) 1 NC_009049.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 1991210 4895255 Rsph17029_1880 Rhodobacter sphaeroides ATCC 17029 acetylornithine deacetylase YP_001043756.1 1990047 R 349101 CDS YP_001043757.1 126462643 4895267 complement(1991348..1992631) 1 NC_009049.1 KEGG: rsp:RSP_0238 hypothetical protein; hypothetical protein 1992631 4895267 Rsph17029_1881 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043757.1 1991348 R 349101 CDS YP_001043758.1 126462644 4895477 complement(1992916..1994364) 1 NC_009049.1 PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: rsp:RSP_0239 pyridine nucleotide transhydrogenase beta subunit; NAD(P) transhydrogenase subunit beta 1994364 4895477 Rsph17029_1882 Rhodobacter sphaeroides ATCC 17029 NAD(P) transhydrogenase subunit beta YP_001043758.1 1992916 R 349101 CDS YP_001043759.1 126462645 4895635 complement(1994375..1995946) 1 NC_009049.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 1995946 pntA 4895635 pntA Rhodobacter sphaeroides ATCC 17029 NAD(P) transhydrogenase subunit alpha YP_001043759.1 1994375 R 349101 CDS YP_001043760.1 126462646 4895960 complement(1996085..1996528) 1 NC_009049.1 KEGG: rsp:RSP_0241 putative protein-S-isoprenylcysteine methyltransferase; putative protein-S-isoprenylcysteine methyltransferase 1996528 4895960 Rsph17029_1884 Rhodobacter sphaeroides ATCC 17029 putative protein-S-isoprenylcysteine methyltransferase YP_001043760.1 1996085 R 349101 CDS YP_001043761.1 126462647 4895975 1996557..1997840 1 NC_009049.1 TIGRFAM: kynureninase; PFAM: aminotransferase, class V; KEGG: rsp:RSP_0242 probable kyurenine hydrolase; kynureninase 1997840 4895975 Rsph17029_1885 Rhodobacter sphaeroides ATCC 17029 kynureninase YP_001043761.1 1996557 D 349101 CDS YP_001043762.1 126462648 4895994 1998064..1999092 1 NC_009049.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_0243 putative lipoprotein; ErfK/YbiS/YcfS/YnhG family protein 1999092 4895994 Rsph17029_1886 Rhodobacter sphaeroides ATCC 17029 ErfK/YbiS/YcfS/YnhG family protein YP_001043762.1 1998064 D 349101 CDS YP_001043763.1 126462649 4896040 complement(1999479..2000324) 1 NC_009049.1 PFAM: peptidase C26; KEGG: rsp:RSP_0244 predicted glutamine amidotransferase; peptidase C26 2000324 4896040 Rsph17029_1887 Rhodobacter sphaeroides ATCC 17029 peptidase C26 YP_001043763.1 1999479 R 349101 CDS YP_001043764.1 126462650 4896178 complement(2000551..2001753) 1 NC_009049.1 PFAM: aminotransferase, class V; KEGG: rsp:RSP_0245 serine-pyruvate aminotransferase/aspartate aminotransferase; class V aminotransferase 2001753 4896178 Rsph17029_1888 Rhodobacter sphaeroides ATCC 17029 class V aminotransferase YP_001043764.1 2000551 R 349101 CDS YP_001043765.1 126462651 4896305 2001924..2003696 1 NC_009049.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0246 ABC lipid efflux transporter, fused ATPase and inner membrane subunits; ABC transporter 2003696 4896305 Rsph17029_1889 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043765.1 2001924 D 349101 CDS YP_001043766.1 126462652 4896688 2003686..2004453 1 NC_009049.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: rsp:RSP_0247 aminomethyltransferase related to GcvT; glycine cleavage T protein (aminomethyl transferase) 2004453 4896688 Rsph17029_1890 Rhodobacter sphaeroides ATCC 17029 glycine cleavage T protein (aminomethyl transferase) YP_001043766.1 2003686 D 349101 CDS YP_001043767.1 126462653 4896751 complement(2004599..2005162) 1 NC_009049.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2005162 4896751 Rsph17029_1891 Rhodobacter sphaeroides ATCC 17029 elongation factor P YP_001043767.1 2004599 R 349101 CDS YP_001043768.1 126462654 4896863 2005371..2005697 1 NC_009049.1 KEGG: rsp:RSP_6107 hypothetical protein; hypothetical protein 2005697 4896863 Rsph17029_1892 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043768.1 2005371 D 349101 CDS YP_001043769.1 126462655 4897336 complement(2006107..2006811) 1 NC_009049.1 KEGG: rsp:RSP_0250 hypothetical protein; hypothetical protein 2006811 4897336 Rsph17029_1893 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043769.1 2006107 R 349101 CDS YP_001043770.1 126462656 4897469 complement(2006963..2008363) 1 NC_009049.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rsp:RSP_0251 outer membrane efflux protein; TolC family type I secretion outer membrane protein 2008363 4897469 Rsph17029_1894 Rhodobacter sphaeroides ATCC 17029 TolC family type I secretion outer membrane protein YP_001043770.1 2006963 R 349101 CDS YP_001043771.1 126462657 4897677 complement(2008411..2009064) 1 NC_009049.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: rsp:RSP_0252 protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2009064 4897677 Rsph17029_1895 Rhodobacter sphaeroides ATCC 17029 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001043771.1 2008411 R 349101 CDS YP_001043772.1 126462658 4895741 2009232..2010614 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0253 glycine/D-amino acid oxidase (deaminating); FAD dependent oxidoreductase 2010614 4895741 Rsph17029_1896 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001043772.1 2009232 D 349101 CDS YP_001043773.1 126462659 4898064 complement(2010641..2012587) 1 NC_009049.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2012587 4898064 Rsph17029_1897 Rhodobacter sphaeroides ATCC 17029 1-deoxy-D-xylulose-5-phosphate synthase YP_001043773.1 2010641 R 349101 CDS YP_001043774.1 126462660 4897188 complement(2012761..2013009) 1 NC_009049.1 KEGG: rsp:RSP_0255 intrinsic membrane PufX protien; intrinsic membrane PufX protien 2013009 4897188 Rsph17029_1898 Rhodobacter sphaeroides ATCC 17029 intrinsic membrane PufX protien YP_001043774.1 2012761 R 349101 CDS YP_001043775.1 126462661 4897011 complement(2013022..2013948) 1 NC_009049.1 TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: rsp:RSP_0256 PufM, photosynthetic reaction center M subunit; photosynthetic reaction center subunit M 2013948 4897011 Rsph17029_1899 Rhodobacter sphaeroides ATCC 17029 photosynthetic reaction center subunit M YP_001043775.1 2013022 R 349101 CDS YP_001043776.1 126462662 4897387 complement(2013941..2014789) 1 NC_009049.1 TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rsp:RSP_0257 PufL, photosynthetic reaction center L subunit; photosynthetic reaction center subunit L 2014789 4897387 Rsph17029_1900 Rhodobacter sphaeroides ATCC 17029 photosynthetic reaction center subunit L YP_001043776.1 2013941 R 349101 CDS YP_001043777.1 126462663 4897586 complement(2014913..2015089) 1 NC_009049.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_0258 LHI alpha, light-harvesting B875 protein; antenna complex subunit alpha/beta 2015089 4897586 Rsph17029_1901 Rhodobacter sphaeroides ATCC 17029 antenna complex subunit alpha/beta YP_001043777.1 2014913 R 349101 CDS YP_001043778.1 126462664 4895510 complement(2015103..2015252) 1 NC_009049.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_6108 LHI beta, light-harvesting B875 subunit; antenna complex subunit alpha/beta 2015252 4895510 Rsph17029_1902 Rhodobacter sphaeroides ATCC 17029 antenna complex subunit alpha/beta YP_001043778.1 2015103 R 349101 CDS YP_001043779.1 126462665 4896784 complement(2015383..2015616) 1 NC_009049.1 PFAM: PufQ cytochrome subunit; KEGG: rsp:RSP_0259 protein PufQ; PufQ cytochrome subunit 2015616 4896784 Rsph17029_1903 Rhodobacter sphaeroides ATCC 17029 PufQ cytochrome subunit YP_001043779.1 2015383 R 349101 CDS YP_001043780.1 126462666 4895089 complement(2015613..2017088) 1 NC_009049.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase, component 1; protein of unknown function DUF1197; KEGG: rsp:RSP_0260 putative chlorophyllide reductase, BchZ subunit; chlorophyllide reductase subunit Z 2017088 4895089 Rsph17029_1904 Rhodobacter sphaeroides ATCC 17029 chlorophyllide reductase subunit Z YP_001043780.1 2015613 R 349101 CDS YP_001043781.1 126462667 4897757 complement(2017088..2018596) 1 NC_009049.1 TIGRFAM: chlorophyllide reductase subunit Y; KEGG: rsp:RSP_0261 chlorophyllide reductase, BchY subunit; chlorophyllide reductase subunit Y 2018596 4897757 Rsph17029_1905 Rhodobacter sphaeroides ATCC 17029 chlorophyllide reductase subunit Y YP_001043781.1 2017088 R 349101 CDS YP_001043782.1 126462668 4897886 complement(2018672..2019673) 1 NC_009049.1 KEGG: rsp:RSP_0262 chlorophyllide reductase, BchX subunit; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X 2019673 4897886 Rsph17029_1906 Rhodobacter sphaeroides ATCC 17029 chlorophyllide reductase iron protein subunit X YP_001043782.1 2018672 R 349101 CDS YP_001043783.1 126462669 4895137 complement(2019670..2020626) 1 NC_009049.1 TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0263 chlorophyll synthesis pathway, BchC; chlorophyll synthesis pathway protein BchC 2020626 4895137 Rsph17029_1907 Rhodobacter sphaeroides ATCC 17029 chlorophyll synthesis pathway protein BchC YP_001043783.1 2019670 R 349101 CDS YP_001043784.1 126462670 4897237 complement(2020779..2021918) 1 NC_009049.1 PFAM: O-methyltransferase, family 2; KEGG: rsp:RSP_0264 hydroxyneurosporene methyltransferase; O-methyltransferase family protein 2021918 4897237 Rsph17029_1908 Rhodobacter sphaeroides ATCC 17029 O-methyltransferase family protein YP_001043784.1 2020779 R 349101 CDS YP_001043785.1 126462671 4896089 complement(2021971..2022849) 1 NC_009049.1 PFAM: Polyprenyl synthetase; KEGG: rsp:RSP_0265 geranylgeranyl pyrophosphate synthetase; polyprenyl synthetase 2022849 4896089 Rsph17029_1909 Rhodobacter sphaeroides ATCC 17029 polyprenyl synthetase YP_001043785.1 2021971 R 349101 CDS YP_001043786.1 126462672 4897363 2022982..2024469 1 NC_009049.1 TIGRFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rsp:RSP_0266 methoxyneurosporene dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2024469 4897363 Rsph17029_1910 Rhodobacter sphaeroides ATCC 17029 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001043786.1 2022982 D 349101 CDS YP_001043787.1 126462673 4897291 2024535..2025374 1 NC_009049.1 PFAM: hydroxyneurosporene synthase; KEGG: rsp:RSP_0267 hydroxyneurosporene dehydrogenase; hydroxyneurosporene synthase 2025374 4897291 Rsph17029_1911 Rhodobacter sphaeroides ATCC 17029 hydroxyneurosporene synthase YP_001043787.1 2024535 D 349101 CDS YP_001043788.1 126462674 4897077 complement(2025536..2026015) 1 NC_009049.1 PFAM: TspO/MBR family protein; KEGG: rsp:RSP_0269 tryptophan rich sensory protein; TspO and MBR like proteins 2026015 4897077 Rsph17029_1912 Rhodobacter sphaeroides ATCC 17029 TspO and MBR like proteins YP_001043788.1 2025536 R 349101 CDS YP_001043789.1 126462675 4897516 complement(2026044..2027111) 1 NC_009049.1 PFAM: Squalene/phytoene synthase; KEGG: rsp:RSP_0270 squalene/phytoene synthase; squalene/phytoene synthase 2027111 4897516 Rsph17029_1913 Rhodobacter sphaeroides ATCC 17029 squalene/phytoene synthase YP_001043789.1 2026044 R 349101 CDS YP_001043790.1 126462676 4897196 complement(2027108..2028664) 1 NC_009049.1 TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rsp:RSP_0271 phytoene dehydrogenase; phytoene dehydrogenase-related protein 2028664 4897196 Rsph17029_1914 Rhodobacter sphaeroides ATCC 17029 phytoene dehydrogenase-related protein YP_001043790.1 2027108 R 349101 CDS YP_001043791.1 126462677 4897471 2028822..2029796 1 NC_009049.1 KEGG: rsp:RSP_0272 spheroidene monooxygenase; spheroidene monooxygenase 2029796 4897471 Rsph17029_1915 Rhodobacter sphaeroides ATCC 17029 spheroidene monooxygenase YP_001043791.1 2028822 D 349101 CDS YP_001043792.1 126462678 4896869 2029801..2030805 1 NC_009049.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit I 2030805 bchI 4896869 bchI Rhodobacter sphaeroides ATCC 17029 magnesium chelatase subunit I YP_001043792.1 2029801 D 349101 CDS YP_001043793.1 126462679 4897464 2030820..2032496 1 NC_009049.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit D 2032496 bchD 4897464 bchD Rhodobacter sphaeroides ATCC 17029 magnesium chelatase subunit D YP_001043793.1 2030820 D 349101 CDS YP_001043794.1 126462680 4897000 2032499..2033365 1 NC_009049.1 PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_0275 magnesium-chelatase, BchO; alpha/beta hydrolase 2033365 4897000 Rsph17029_1918 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001043794.1 2032499 D 349101 CDS YP_001043795.1 126462681 4897279 complement(2033614..2034159) 1 NC_009049.1 KEGG: rsp:RSP_0276 isopentenyl-diphosphate delta-isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase 2034159 4897279 Rsph17029_1919 Rhodobacter sphaeroides ATCC 17029 isopentenyl-diphosphate delta-isomerase YP_001043795.1 2033614 R 349101 CDS YP_001043796.1 126462682 4896513 complement(2034150..2035334) 1 NC_009049.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; Lycopene beta and epsilon cyclase; KEGG: rsp:RSP_0277 geranylgeranyl hydrogenase; geranylgeranyl reductase 2035334 4896513 Rsph17029_1920 Rhodobacter sphaeroides ATCC 17029 geranylgeranyl reductase YP_001043796.1 2034150 R 349101 CDS YP_001043797.1 126462683 4896798 complement(2035337..2036620) 1 NC_009049.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0278 putative light-harvesting 1 (B870) complex assembly protein PucC; PUCC protein 2036620 4896798 Rsph17029_1921 Rhodobacter sphaeroides ATCC 17029 PUCC protein YP_001043797.1 2035337 R 349101 CDS YP_001043798.1 126462684 4895085 complement(2036617..2037525) 1 NC_009049.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rsp:RSP_0279 bacteriochlorophyll a synthase; bacteriochlorophyll/chlorophyll a synthase 2037525 4895085 Rsph17029_1922 Rhodobacter sphaeroides ATCC 17029 bacteriochlorophyll/chlorophyll a synthase YP_001043798.1 2036617 R 349101 CDS YP_001043799.1 126462685 4895158 complement(2037599..2038219) 1 NC_009049.1 TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase, 4VR; KEGG: rsp:RSP_0280 bacteriochlorophyll synthase, 23 kDa subunit (BchJ); bacteriochlorophyll 4-vinyl reductase 2038219 4895158 Rsph17029_1923 Rhodobacter sphaeroides ATCC 17029 bacteriochlorophyll 4-vinyl reductase YP_001043799.1 2037599 R 349101 CDS YP_001043800.1 126462686 4895094 complement(2038226..2040064) 1 NC_009049.1 KEGG: rsp:RSP_0281 magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66 kDa subunit(BchE); TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2040064 4895094 Rsph17029_1924 Rhodobacter sphaeroides ATCC 17029 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_001043800.1 2038226 R 349101 CDS YP_001043801.1 126462687 4897618 complement(2040212..2041606) 1 NC_009049.1 KEGG: rsp:RSP_0282 transcriptional regulator, PpsR; TIGRFAM: PAS sensor protein; transcriptional regulator PpsR; PFAM: helix-turn-helix, Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; Fis family transcriptional regulator 2041606 4897618 Rsph17029_1925 Rhodobacter sphaeroides ATCC 17029 Fis family transcriptional regulator YP_001043801.1 2040212 R 349101 CDS YP_001043802.1 126462688 4897463 complement(2041665..2042459) 1 NC_009049.1 KEGG: rsp:RSP_0283 regulatory protein, PpaA; regulatory protein, PpaA 2042459 4897463 Rsph17029_1926 Rhodobacter sphaeroides ATCC 17029 regulatory protein, PpaA YP_001043802.1 2041665 R 349101 CDS YP_001043803.1 126462689 4895097 2042787..2043314 1 NC_009049.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rsp:RSP_0284 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 2043314 4895097 Rsph17029_1927 Rhodobacter sphaeroides ATCC 17029 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD YP_001043803.1 2042787 D 349101 CDS YP_001043804.1 126462690 4896974 2043311..2044597 1 NC_009049.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 2044597 4896974 Rsph17029_1928 Rhodobacter sphaeroides ATCC 17029 light-independent protochlorophyllide reductase subunit N YP_001043804.1 2043311 D 349101 CDS YP_001043805.1 126462691 4895064 2044668..2046272 1 NC_009049.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 2046272 4895064 Rsph17029_1929 Rhodobacter sphaeroides ATCC 17029 light-independent protochlorophyllide reductase subunit B YP_001043805.1 2044668 D 349101 CDS YP_001043806.1 126462692 4895098 2046262..2049843 1 NC_009049.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H 2049843 bchH 4895098 bchH Rhodobacter sphaeroides ATCC 17029 magnesium chelatase subunit H YP_001043806.1 2046262 D 349101 CDS YP_001043807.1 126462693 4896997 2049905..2050798 1 NC_009049.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 2050798 chlL 4896997 chlL Rhodobacter sphaeroides ATCC 17029 protochlorophyllide reductase iron-sulfur ATP-binding protein YP_001043807.1 2049905 D 349101 CDS YP_001043808.1 126462694 4897179 2050842..2051510 1 NC_009049.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 2051510 4897179 Rsph17029_1932 Rhodobacter sphaeroides ATCC 17029 Mg-protoporphyrin IX methyl transferase YP_001043808.1 2050842 D 349101 CDS YP_001043809.1 126462695 4896975 2051507..2052946 1 NC_009049.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0290 light-harvesting 1 (B870) complex assembly; PUCC protein 2052946 4896975 Rsph17029_1933 Rhodobacter sphaeroides ATCC 17029 PUCC protein YP_001043809.1 2051507 D 349101 CDS YP_001043810.1 126462696 4897269 2052965..2053747 1 NC_009049.1 TIGRFAM: photosynthetic reaction center H subunit; PFAM: photosynthetic reaction centre, H-chain; PRC-barrel domain protein; KEGG: rsp:RSP_0291 reaction centre H protein; photosynthetic reaction center subunit H 2053747 4897269 Rsph17029_1934 Rhodobacter sphaeroides ATCC 17029 photosynthetic reaction center subunit H YP_001043810.1 2052965 D 349101 CDS YP_001043811.1 126462697 4895735 2053874..2054518 1 NC_009049.1 KEGG: rsp:RSP_0292 hypothetical protein; hypothetical protein 2054518 4895735 Rsph17029_1935 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043811.1 2053874 D 349101 CDS YP_001043812.1 126462698 4896497 2054595..2055059 1 NC_009049.1 KEGG: rsp:RSP_0293 hypothetical protein; hypothetical protein 2055059 4896497 Rsph17029_1936 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043812.1 2054595 D 349101 CDS YP_001043813.1 126462699 4895104 2055081..2055377 1 NC_009049.1 KEGG: rsp:RSP_6110 hypothetical protein; hypothetical protein 2055377 4895104 Rsph17029_1937 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043813.1 2055081 D 349101 CDS YP_001043814.1 126462700 4895112 2055374..2056465 1 NC_009049.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase 2056465 4895112 Rsph17029_1938 Rhodobacter sphaeroides ATCC 17029 magnesium-protoporphyrin IX monomethyl ester cyclase YP_001043814.1 2055374 D 349101 CDS YP_001043815.1 126462701 4895114 2056527..2057399 1 NC_009049.1 KEGG: rsp:RSP_0295 hypothetical protein; hypothetical protein 2057399 4895114 Rsph17029_1939 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043815.1 2056527 D 349101 CDS YP_001043816.1 126462702 4895130 2057739..2058176 1 NC_009049.1 PFAM: cytochrome c, class I; KEGG: rsp:RSP_0296 cytochrome c2; cytochrome c, class I 2058176 4895130 Rsph17029_1940 Rhodobacter sphaeroides ATCC 17029 cytochrome c, class I YP_001043816.1 2057739 D 349101 CDS YP_001043817.1 126462703 4895136 complement(2058579..2059277) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0297 ABC branched chain amino acid transporter, ATPase subunit; ABC transporter 2059277 4895136 Rsph17029_1941 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043817.1 2058579 R 349101 CDS YP_001043818.1 126462704 4895145 complement(2059274..2060017) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0298 ABC branched chain amino acid transporter, ATPase subunit; ABC transporter 2060017 4895145 Rsph17029_1942 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043818.1 2059274 R 349101 CDS YP_001043819.1 126462705 4895156 complement(2060014..2061246) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_0299 ABC branched chain amino acid transporter, inner membrane subunit; inner-membrane translocator 2061246 4895156 Rsph17029_1943 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001043819.1 2060014 R 349101 CDS YP_001043820.1 126462706 4897850 complement(2061613..2063541) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_0300 ABC branched chain amino acid transporter, inner membrane subunit; inner-membrane translocator 2063541 4897850 Rsph17029_1944 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001043820.1 2061613 R 349101 CDS YP_001043821.1 126462707 4895283 complement(2063605..2064885) 1 NC_009049.1 KEGG: rsp:RSP_0301 ABC branched chain amino acid transporter, substrate binding protein; branched chain amino acid ABC transporter substrate-binding protein 2064885 4895283 Rsph17029_1945 Rhodobacter sphaeroides ATCC 17029 branched chain amino acid ABC transporter substrate-binding protein YP_001043821.1 2063605 R 349101 CDS YP_001043822.1 126462708 4895161 complement(2065184..2065807) 1 NC_009049.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: rsp:RSP_0302 urease accessory protein G; urease accessory protein UreG 2065807 4895161 Rsph17029_1946 Rhodobacter sphaeroides ATCC 17029 urease accessory protein UreG YP_001043822.1 2065184 R 349101 CDS YP_001043823.1 126462709 4895217 complement(2065804..2066436) 1 NC_009049.1 PFAM: Urease accessory protein UreF; KEGG: rsp:RSP_0303 urease accessory protein UreF; urease accessory protein UreF 2066436 4895217 Rsph17029_1947 Rhodobacter sphaeroides ATCC 17029 urease accessory protein UreF YP_001043823.1 2065804 R 349101 CDS YP_001043824.1 126462710 4895172 complement(2066433..2066981) 1 NC_009049.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 2066981 ureE 4895172 ureE Rhodobacter sphaeroides ATCC 17029 urease accessory protein UreE YP_001043824.1 2066433 R 349101 CDS YP_001043825.1 126462711 4895189 2067070..2067381 1 NC_009049.1 hypothetical protein 2067381 4895189 Rsph17029_1949 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043825.1 2067070 D 349101 CDS YP_001043826.1 126462712 4895178 complement(2067399..2069105) 1 NC_009049.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 2069105 ureC 4895178 ureC Rhodobacter sphaeroides ATCC 17029 urease subunit alpha YP_001043826.1 2067399 R 349101 CDS YP_001043827.1 126462713 4895168 2069265..2070137 1 NC_009049.1 KEGG: rsp:RSP_0306 class I diheme cytochrome c; class I diheme cytochrome c 2070137 4895168 Rsph17029_1951 Rhodobacter sphaeroides ATCC 17029 class I diheme cytochrome c YP_001043827.1 2069265 D 349101 CDS YP_001043828.1 126462714 4895186 complement(2070193..2070510) 1 NC_009049.1 KEGG: rsp:RSP_0307 antifreeze protein, type I; antifreeze protein, type I 2070510 4895186 Rsph17029_1952 Rhodobacter sphaeroides ATCC 17029 antifreeze protein, type I YP_001043828.1 2070193 R 349101 CDS YP_001043829.1 126462715 4897858 complement(2070535..2070840) 1 NC_009049.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 2070840 ureB 4897858 ureB Rhodobacter sphaeroides ATCC 17029 urease subunit beta YP_001043829.1 2070535 R 349101 CDS YP_001043830.1 126462716 4895198 complement(2070891..2071193) 1 NC_009049.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 2071193 ureA 4895198 ureA Rhodobacter sphaeroides ATCC 17029 urease subunit gamma YP_001043830.1 2070891 R 349101 CDS YP_001043831.1 126462717 4895218 complement(2071205..2072032) 1 NC_009049.1 PFAM: Urease accessory protein UreD; KEGG: rsp:RSP_0310 urease accessory protein UreD; urease accessory protein UreD 2072032 4895218 Rsph17029_1955 Rhodobacter sphaeroides ATCC 17029 urease accessory protein UreD YP_001043831.1 2071205 R 349101 CDS YP_001043832.1 126462718 4895233 2072237..2073274 1 NC_009049.1 PFAM: aminoglycoside phosphotransferase; KEGG: rsp:RSP_0311 putative aminotransferase protein; aminoglycoside phosphotransferase 2073274 4895233 Rsph17029_1956 Rhodobacter sphaeroides ATCC 17029 aminoglycoside phosphotransferase YP_001043832.1 2072237 D 349101 CDS YP_001043833.1 126462719 4895226 2073309..2074619 1 NC_009049.1 PFAM: aminotransferase class-III; KEGG: rsp:RSP_0312 aminotransferase class-III; class III aminotransferase 2074619 4895226 Rsph17029_1957 Rhodobacter sphaeroides ATCC 17029 class III aminotransferase YP_001043833.1 2073309 D 349101 CDS YP_001043834.1 126462720 4895280 2075047..2075202 1 NC_009049.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_0314 LHII beta, light-harvesting B800/850 protein; antenna complex subunit alpha/beta 2075202 4895280 Rsph17029_1958 Rhodobacter sphaeroides ATCC 17029 antenna complex subunit alpha/beta YP_001043834.1 2075047 D 349101 CDS YP_001043835.1 126462721 4896194 2075218..2075382 1 NC_009049.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_6256 LHII alpha, light-harvesting B800/850 protein; antenna complex subunit alpha/beta 2075382 4896194 Rsph17029_1959 Rhodobacter sphaeroides ATCC 17029 antenna complex subunit alpha/beta YP_001043835.1 2075218 D 349101 CDS YP_001043836.1 126462722 4895301 2075577..2076956 1 NC_009049.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0315 light-harvesting 1 (B870) complex assembly; PUCC protein 2076956 4895301 Rsph17029_1960 Rhodobacter sphaeroides ATCC 17029 PUCC protein YP_001043836.1 2075577 D 349101 CDS YP_001043837.1 126462723 4895473 2077354..2078097 1 NC_009049.1 PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_0316 transcriptional regulator, LuxR family; response regulator receiver protein 2078097 4895473 Rsph17029_1961 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001043837.1 2077354 D 349101 CDS YP_001043838.1 126462724 4895077 complement(2078146..2079504) 1 NC_009049.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2079504 4895077 Rsph17029_1962 Rhodobacter sphaeroides ATCC 17029 coproporphyrinogen III oxidase YP_001043838.1 2078146 R 349101 CDS YP_001043839.1 126462725 4895330 complement(2079578..2080273) 1 NC_009049.1 PFAM: NnrUfamily protein; KEGG: rsp:RSP_0318 hypothetical protein; NnrU family protein 2080273 4895330 Rsph17029_1963 Rhodobacter sphaeroides ATCC 17029 NnrU family protein YP_001043839.1 2079578 R 349101 CDS YP_001043840.1 126462726 4895148 complement(2080270..2080491) 1 NC_009049.1 KEGG: rsp:RSP_0319 NnrU; protein NnrU 2080491 4895148 Rsph17029_1964 Rhodobacter sphaeroides ATCC 17029 protein NnrU YP_001043840.1 2080270 R 349101 CDS YP_001043841.1 126462727 4895314 complement(2080488..2080661) 1 NC_009049.1 KEGG: rsp:RSP_0320 NnrT; hypothetical protein 2080661 4895314 Rsph17029_1965 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043841.1 2080488 R 349101 CDS YP_001043842.1 126462728 4897138 complement(2080663..2082537) 1 NC_009049.1 PFAM: von Willebrand factor, type A; KEGG: rsp:RSP_0321 NorD nitric oxide reductase activation protein; von Willebrand factor type A domain-containing protein 2082537 4897138 Rsph17029_1966 Rhodobacter sphaeroides ATCC 17029 von Willebrand factor type A domain-containing protein YP_001043842.1 2080663 R 349101 CDS YP_001043843.1 126462729 4895331 complement(2082542..2083339) 1 NC_009049.1 PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: rsp:RSP_0322 NorQ protein required for nitric oxide reductase activity; ATPase 2083339 4895331 Rsph17029_1967 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001043843.1 2082542 R 349101 CDS YP_001043844.1 126462730 4895259 complement(2083336..2084676) 1 NC_009049.1 PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_0323 nitric oxide reductase large subunit, cytochrome b; cytochrome c oxidase subunit I 2084676 4895259 Rsph17029_1968 Rhodobacter sphaeroides ATCC 17029 cytochrome c oxidase subunit I YP_001043844.1 2083336 R 349101 CDS YP_001043845.1 126462731 4895374 complement(2084690..2085142) 1 NC_009049.1 KEGG: rsp:RSP_0324 nitric oxide reductase subunit C, cytochrome c; nitric-oxide reductase 2085142 4895374 Rsph17029_1969 Rhodobacter sphaeroides ATCC 17029 nitric-oxide reductase YP_001043845.1 2084690 R 349101 CDS YP_001043846.1 126462732 4895402 2085292..2085498 1 NC_009049.1 KEGG: rsp:RSP_0325 hypothetical protein; hypothetical protein 2085498 4895402 Rsph17029_1970 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043846.1 2085292 D 349101 CDS YP_001043847.1 126462733 4895448 2085672..2086208 1 NC_009049.1 KEGG: rsp:RSP_0326 hypothetical protein; hypothetical protein 2086208 4895448 Rsph17029_1971 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043847.1 2085672 D 349101 CDS YP_001043848.1 126462734 4897661 complement(2086216..2086917) 1 NC_009049.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rsp:RSP_0327 Crp-Fnr regulatory protein (NnrR); CRP/FNR family transcriptional regulator 2086917 4897661 Rsph17029_1972 Rhodobacter sphaeroides ATCC 17029 CRP/FNR family transcriptional regulator YP_001043848.1 2086216 R 349101 CDS YP_001043849.1 126462735 4895442 2087129..2088322 1 NC_009049.1 PFAM: NnrS family protein; KEGG: rsp:RSP_0328 hypothetical protein; NnrS family protein 2088322 4895442 Rsph17029_1973 Rhodobacter sphaeroides ATCC 17029 NnrS family protein YP_001043849.1 2087129 D 349101 CDS YP_001043850.1 126462736 4895182 2088456..2089466 1 NC_009049.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rsp:RSP_0329 GAF sensor diguanylate cyclase (GGDEF); diguanylate cyclase 2089466 4895182 Rsph17029_1974 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase YP_001043850.1 2088456 D 349101 CDS YP_001043851.1 126462737 4895333 complement(2089482..2090891) 1 NC_009049.1 KEGG: rsp:RSP_0330 hypothetical protein; hypothetical protein 2090891 4895333 Rsph17029_1975 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043851.1 2089482 R 349101 CDS YP_001043852.1 126462738 4895564 complement(2090876..2091946) 1 NC_009049.1 PFAM: glycoside hydrolase, family 8; KEGG: rsp:RSP_0331 hypothetical protein; cellulase 2091946 4895564 Rsph17029_1976 Rhodobacter sphaeroides ATCC 17029 cellulase YP_001043852.1 2090876 R 349101 CDS YP_001043853.1 126462739 4895187 complement(2091943..2094120) 1 NC_009049.1 KEGG: rsp:RSP_0332 possible cellulose synthase; putative cellulose synthase 2094120 4895187 Rsph17029_1977 Rhodobacter sphaeroides ATCC 17029 putative cellulose synthase YP_001043853.1 2091943 R 349101 CDS YP_001043854.1 126462740 4895183 complement(2094120..2096486) 1 NC_009049.1 PFAM: glycosyl transferase, family 2; type IV pilus assembly PilZ; KEGG: rsp:RSP_0333 possible cellulose synthase; cellulose synthase 2096486 4895183 Rsph17029_1978 Rhodobacter sphaeroides ATCC 17029 cellulose synthase YP_001043854.1 2094120 R 349101 CDS YP_001043855.1 126462741 4895578 complement(2096520..2097191) 1 NC_009049.1 KEGG: rsp:RSP_0334 hypothetical protein; hypothetical protein 2097191 4895578 Rsph17029_1979 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043855.1 2096520 R 349101 CDS YP_001043856.1 126462742 4895629 2097605..2099944 1 NC_009049.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_0335 probable dicyclicGMP cyclasephosphodiesterase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2099944 4895629 Rsph17029_1980 Rhodobacter sphaeroides ATCC 17029 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001043856.1 2097605 D 349101 CDS YP_001043857.1 126462743 4895662 complement(2100035..2100856) 1 NC_009049.1 PFAM: metallophosphoesterase; KEGG: rsp:RSP_0337 possible phospodiesterase; metallophosphoesterase 2100856 4895662 Rsph17029_1981 Rhodobacter sphaeroides ATCC 17029 metallophosphoesterase YP_001043857.1 2100035 R 349101 CDS YP_001043858.1 126462744 4895611 complement(2100853..2101770) 1 NC_009049.1 PFAM: diacylglycerol kinase, catalytic region; KEGG: rsp:RSP_0338 hypothetical protein; diacylglycerol kinase catalytic subunit 2101770 4895611 Rsph17029_1982 Rhodobacter sphaeroides ATCC 17029 diacylglycerol kinase catalytic subunit YP_001043858.1 2100853 R 349101 CDS YP_001043859.1 126462745 4895607 complement(2101845..2102414) 1 NC_009049.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0339 hypothetical protein; type 12 methyltransferase 2102414 4895607 Rsph17029_1983 Rhodobacter sphaeroides ATCC 17029 type 12 methyltransferase YP_001043859.1 2101845 R 349101 CDS YP_001043860.1 126462746 4895582 complement(2102575..2103597) 1 NC_009049.1 PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_0340 hypothetical protein; hypothetical protein 2103597 4895582 Rsph17029_1984 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043860.1 2102575 R 349101 CDS YP_001043861.1 126462747 4895673 complement(2103787..2105064) 1 NC_009049.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 2105064 4895673 Rsph17029_1985 Rhodobacter sphaeroides ATCC 17029 cytosine deaminase YP_001043861.1 2103787 R 349101 CDS YP_001043862.1 126462748 4895667 complement(2105064..2106011) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_0342 putative ABC sugar transporter, inner membrane subunit; inner-membrane translocator 2106011 4895667 Rsph17029_1986 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001043862.1 2105064 R 349101 CDS YP_001043863.1 126462749 4895456 complement(2106103..2107146) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_0343 putative ABC sugar transporter, inner membrane subunit; inner-membrane translocator 2107146 4895456 Rsph17029_1987 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001043863.1 2106103 R 349101 CDS YP_001043864.1 126462750 4895732 complement(2107136..2108656) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0344 putative ABC sugar transporter, fused ATPase subunits; ABC transporter 2108656 4895732 Rsph17029_1988 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043864.1 2107136 R 349101 CDS YP_001043865.1 126462751 4895775 complement(2108653..2109657) 1 NC_009049.1 PFAM: basic membrane lipoprotein; KEGG: rsp:RSP_0345 possible ABC transporter, periplasmic binding protein; basic membrane lipoprotein 2109657 4895775 Rsph17029_1989 Rhodobacter sphaeroides ATCC 17029 basic membrane lipoprotein YP_001043865.1 2108653 R 349101 CDS YP_001043866.1 126462752 4895142 2109928..2111028 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_0346 ABC transporter, substrate binding protein; extracellular solute-binding protein 2111028 4895142 Rsph17029_1990 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043866.1 2109928 D 349101 CDS YP_001043867.1 126462753 4896670 2111183..2112064 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0347 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2112064 4896670 Rsph17029_1991 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043867.1 2111183 D 349101 CDS YP_001043868.1 126462754 4895861 2112061..2112852 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0348 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2112852 4895861 Rsph17029_1992 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043868.1 2112061 D 349101 CDS YP_001043869.1 126462755 4897197 2112869..2113927 1 NC_009049.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_0349 ABC transporter, ATPase subunit; ABC transporter 2113927 4897197 Rsph17029_1993 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043869.1 2112869 D 349101 CDS YP_001043870.1 126462756 4896099 2113981..2114409 1 NC_009049.1 KEGG: rsp:RSP_0350 hypothetical protein; hypothetical protein 2114409 4896099 Rsph17029_1994 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043870.1 2113981 D 349101 CDS YP_001043871.1 126462757 4896113 2114452..2115477 1 NC_009049.1 PFAM: aldo/keto reductase; KEGG: rsp:RSP_0351 D-threo-aldose 1-dehydrogenase; aldo/keto reductase 2115477 4896113 Rsph17029_1995 Rhodobacter sphaeroides ATCC 17029 aldo/keto reductase YP_001043871.1 2114452 D 349101 CDS YP_001043872.1 126462758 4896144 complement(2115635..2115958) 1 NC_009049.1 PFAM: ferredoxin; KEGG: rsp:RSP_0352 probable ferredoxin; ferredoxin 2115958 4896144 Rsph17029_1996 Rhodobacter sphaeroides ATCC 17029 ferredoxin YP_001043872.1 2115635 R 349101 CDS YP_001043873.1 126462759 4896139 2116071..2116493 1 NC_009049.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: rde:RD1_1924 DNA polymerase III alpha subunit, putative; tRNA/helicase-type nucleic acid binding protein 2116493 4896139 Rsph17029_1997 Rhodobacter sphaeroides ATCC 17029 tRNA/helicase-type nucleic acid binding protein YP_001043873.1 2116071 D 349101 CDS YP_001043874.1 126462760 4896153 2116772..2117227 1 NC_009049.1 KEGG: rsp:RSP_0354 hypothetical protein; hypothetical protein 2117227 4896153 Rsph17029_1998 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043874.1 2116772 D 349101 CDS YP_001043875.1 126462761 4896200 complement(2117282..2118802) 1 NC_009049.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rsp:RSP_0355 possible serine protease; protease Do 2118802 4896200 Rsph17029_1999 Rhodobacter sphaeroides ATCC 17029 protease Do YP_001043875.1 2117282 R 349101 CDS YP_001043876.1 126462762 4895184 complement(2118916..2119938) 1 NC_009049.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: rsp:RSP_0356 probable HflC protein; HflC protein 2119938 4895184 Rsph17029_2000 Rhodobacter sphaeroides ATCC 17029 HflC protein YP_001043876.1 2118916 R 349101 CDS YP_001043877.1 126462763 4896341 complement(2119938..2121119) 1 NC_009049.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rsp:RSP_0357 probable HflK protein; HflK protein 2121119 4896341 Rsph17029_2001 Rhodobacter sphaeroides ATCC 17029 HflK protein YP_001043877.1 2119938 R 349101 CDS YP_001043878.1 126462764 4896939 complement(2121175..2122533) 1 NC_009049.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rsp:RSP_0358 probable glutathione reductase; glutathione-disulfide reductase 2122533 4896939 Rsph17029_2002 Rhodobacter sphaeroides ATCC 17029 glutathione-disulfide reductase YP_001043878.1 2121175 R 349101 CDS YP_001043879.1 126462765 4896392 complement(2122538..2123326) 1 NC_009049.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 2123326 4896392 Rsph17029_2003 Rhodobacter sphaeroides ATCC 17029 ribose-5-phosphate isomerase A YP_001043879.1 2122538 R 349101 CDS YP_001043880.1 126462766 4897805 complement(2123465..2123674) 1 NC_009049.1 KEGG: rsp:RSP_0360 hypothetical protein; hypothetical protein 2123674 4897805 Rsph17029_2004 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043880.1 2123465 R 349101 CDS YP_001043881.1 126462767 4896552 2123971..2125350 1 NC_009049.1 KEGG: rsp:RSP_0361 probable L-serine dehydratase protein; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 2125350 4896552 Rsph17029_2005 Rhodobacter sphaeroides ATCC 17029 L-serine dehydratase 1 YP_001043881.1 2123971 D 349101 CDS YP_001043882.1 126462768 4896545 2125719..2126642 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0364 possible transporter, RarD family, DMT superfamily; hypothetical protein 2126642 4896545 Rsph17029_2006 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043882.1 2125719 D 349101 CDS YP_001043883.1 126462769 4897967 complement(2126584..2127282) 1 NC_009049.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; KEGG: rsp:RSP_0363 hypothetical protein; thiamine pyrophosphokinase 2127282 4897967 Rsph17029_2007 Rhodobacter sphaeroides ATCC 17029 thiamine pyrophosphokinase YP_001043883.1 2126584 R 349101 CDS YP_001043884.1 126462770 4896625 complement(2127334..2128215) 1 NC_009049.1 KEGG: rsp:RSP_0365 hypothetical protein; hypothetical protein 2128215 4896625 Rsph17029_2008 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043884.1 2127334 R 349101 CDS YP_001043885.1 126462771 4896731 complement(2128318..2128560) 1 NC_009049.1 KEGG: rsp:RSP_6113 hypothetical protein; hypothetical protein 2128560 4896731 Rsph17029_2009 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043885.1 2128318 R 349101 CDS YP_001043886.1 126462772 4896862 complement(2128640..2129932) 1 NC_009049.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2129932 4896862 Rsph17029_2010 Rhodobacter sphaeroides ATCC 17029 adenylosuccinate synthetase YP_001043886.1 2128640 R 349101 CDS YP_001043887.1 126462773 4896642 2130243..2130854 1 NC_009049.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rsp:RSP_0367 preprotein translocase SecG subunit; preprotein translocase subunit SecG 2130854 secG 4896642 secG Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecG YP_001043887.1 2130243 D 349101 CDS YP_001043888.1 126462774 4896870 2131017..2132660 1 NC_009049.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2132660 pyrG 4896870 pyrG Rhodobacter sphaeroides ATCC 17029 CTP synthetase YP_001043888.1 2131017 D 349101 CDS YP_001043889.1 126462775 4896831 2132839..2133621 1 NC_009049.1 PFAM: protein of unknown function DUF519; KEGG: rsp:RSP_0369 hypothetical protein; hypothetical protein 2133621 4896831 Rsph17029_2013 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043889.1 2132839 D 349101 CDS YP_001043890.1 126462776 4896903 2133699..2134136 1 NC_009049.1 PFAM: protein of unknown function DUF1332; KEGG: rsp:RSP_0370 hypothetical protein; hypothetical protein 2134136 4896903 Rsph17029_2014 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043890.1 2133699 D 349101 CDS YP_001043891.1 126462777 4896931 2134300..2135097 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0371 ABC basic amino acid transporter, ATPase subunit; ABC transporter 2135097 4896931 Rsph17029_2015 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043891.1 2134300 D 349101 CDS YP_001043892.1 126462778 4897845 2135140..2135865 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_0372 ABC basic amino acid transporter, solute-binding protein; extracellular solute-binding protein 2135865 4897845 Rsph17029_2016 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001043892.1 2135140 D 349101 CDS YP_001043893.1 126462779 4897037 2135905..2136786 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0373 ABC basic amino acid transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2136786 4897037 Rsph17029_2017 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043893.1 2135905 D 349101 CDS YP_001043894.1 126462780 4897870 2136783..2137610 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0374 ABC basic amino acid transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2137610 4897870 Rsph17029_2018 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001043894.1 2136783 D 349101 CDS YP_001043895.1 126462781 4895171 2137615..2138952 1 NC_009049.1 PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_0375 probable glutamine synthetase; glutamate--ammonia ligase 2138952 4895171 Rsph17029_2019 Rhodobacter sphaeroides ATCC 17029 glutamate--ammonia ligase YP_001043895.1 2137615 D 349101 CDS YP_001043896.1 126462782 4897171 2139012..2139689 1 NC_009049.1 PFAM: glutamine amidotransferase class-I; KEGG: rsp:RSP_0376 glutamine amidotransferase class-I; glutamine amidotransferase 2139689 4897171 Rsph17029_2020 Rhodobacter sphaeroides ATCC 17029 glutamine amidotransferase YP_001043896.1 2139012 D 349101 CDS YP_001043897.1 126462783 4897216 complement(2139805..2140068) 1 NC_009049.1 KEGG: bam:Bamb_2417 hypothetical protein; hypothetical protein 2140068 4897216 Rsph17029_2021 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043897.1 2139805 R 349101 CDS YP_001043898.1 126462784 4897819 complement(2140292..2140522) 1 NC_009049.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: ngo:NGO1102 hypothetical protein, putative phage associated protein; pathogenesis-related transcriptional factor and ERF protein 2140522 4897819 Rsph17029_2022 Rhodobacter sphaeroides ATCC 17029 pathogenesis-related transcriptional factor and ERF protein YP_001043898.1 2140292 R 349101 CDS YP_001043899.1 126462785 4897429 complement(2140600..2141421) 1 NC_009049.1 PFAM: Integrase, catalytic region; KEGG: bpm:BURPS1710b_1776 integrase core domain protein; integrase catalytic subunit 2141421 4897429 Rsph17029_2023 Rhodobacter sphaeroides ATCC 17029 integrase catalytic subunit YP_001043899.1 2140600 R 349101 CDS YP_001043900.1 126462786 4897508 complement(2141418..2141735) 1 NC_009049.1 PFAM: transposase IS3/IS911 family protein; KEGG: sil:SPOA0091 IS3 family transposase orfA; transposase IS3/IS911 family protein 2141735 4897508 Rsph17029_2024 Rhodobacter sphaeroides ATCC 17029 transposase IS3/IS911 family protein YP_001043900.1 2141418 R 349101 CDS YP_001043901.1 126462787 4896539 2144901..2145833 1 NC_009049.1 KEGG: rsp:RSP_6250 hypothetical protein; hypothetical protein 2145833 4896539 Rsph17029_2026 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043901.1 2144901 D 349101 CDS YP_001043902.1 126462788 4897624 complement(2147151..2147708) 1 NC_009049.1 PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: bms:BR1082 site-specific recombinase, resolvase family; resolvase domain-containing protein 2147708 4897624 Rsph17029_2027 Rhodobacter sphaeroides ATCC 17029 resolvase domain-containing protein YP_001043902.1 2147151 R 349101 CDS YP_001043903.1 126462789 4897788 2148006..2148893 1 NC_009049.1 KEGG: dde:Dde_0780 hypothetical protein; hypothetical protein 2148893 4897788 Rsph17029_2028 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043903.1 2148006 D 349101 CDS YP_001043904.1 126462790 4897657 2148890..2151025 1 NC_009049.1 PFAM: helicase domain protein; KEGG: dde:Dde_0781 helicase-like; helicase domain-containing protein 2151025 4897657 Rsph17029_2029 Rhodobacter sphaeroides ATCC 17029 helicase domain-containing protein YP_001043904.1 2148890 D 349101 CDS YP_001043905.1 126462791 4897744 complement(2151144..2152241) 1 NC_009049.1 PFAM: phage integrase family protein; KEGG: psp:PSPPH_1897 chorismate mutase family protein; phage integrase family protein 2152241 4897744 Rsph17029_2030 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001043905.1 2151144 R 349101 CDS YP_001043906.1 126462792 4897743 2152400..2153755 1 NC_009049.1 PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_0377 probable glutamine synthetase; glutamate--ammonia ligase 2153755 4897743 Rsph17029_2031 Rhodobacter sphaeroides ATCC 17029 glutamate--ammonia ligase YP_001043906.1 2152400 D 349101 CDS YP_001043907.1 126462793 4897780 2153752..2155053 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0378 hypothetical protein; FAD dependent oxidoreductase 2155053 4897780 Rsph17029_2032 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001043907.1 2153752 D 349101 CDS YP_001043908.1 126462794 4897857 2155357..2156724 1 NC_009049.1 PFAM: aminotransferase class-III; KEGG: rsp:RSP_0379 putative aminotransferase protein; class III aminotransferase 2156724 4897857 Rsph17029_2033 Rhodobacter sphaeroides ATCC 17029 class III aminotransferase YP_001043908.1 2155357 D 349101 CDS YP_001043909.1 126462795 4897807 complement(2156787..2157341) 1 NC_009049.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: rsp:RSP_0380 hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR 2157341 4897807 Rsph17029_2034 Rhodobacter sphaeroides ATCC 17029 polyhydroxyalkonate synthesis repressor PhaR YP_001043909.1 2156787 R 349101 CDS YP_001043910.1 126462796 4897862 complement(2157469..2157945) 1 NC_009049.1 KEGG: rsp:RSP_0381 hypothetical protein; hypothetical protein 2157945 4897862 Rsph17029_2035 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043910.1 2157469 R 349101 CDS YP_001043911.1 126462797 4897806 complement(2158072..2159877) 1 NC_009049.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rsp:RSP_0382 poly-beta-hydroxybutyrate polymerase; poly(R)-hydroxyalkanoic acid synthase 2159877 4897806 Rsph17029_2036 Rhodobacter sphaeroides ATCC 17029 poly(R)-hydroxyalkanoic acid synthase YP_001043911.1 2158072 R 349101 CDS YP_001043912.1 126462798 4895522 2159979..2161250 1 NC_009049.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rsp:RSP_0383 hypothetical protein; polyhydroxyalkanoate depolymerase 2161250 4895522 Rsph17029_2037 Rhodobacter sphaeroides ATCC 17029 polyhydroxyalkanoate depolymerase YP_001043912.1 2159979 D 349101 CDS YP_001043913.1 126462799 4897877 complement(2161318..2162064) 1 NC_009049.1 KEGG: rsp:RSP_0384 hypothetical protein; hypothetical protein 2162064 4897877 Rsph17029_2038 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043913.1 2161318 R 349101 CDS YP_001043914.1 126462800 4897922 2162225..2164165 1 NC_009049.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2164165 thrS 4897922 thrS Rhodobacter sphaeroides ATCC 17029 threonyl-tRNA synthetase YP_001043914.1 2162225 D 349101 CDS YP_001043915.1 126462801 4897992 2164675..2164881 1 NC_009049.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_0386 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2164881 4897992 Rsph17029_2040 Rhodobacter sphaeroides ATCC 17029 cold-shock DNA-binding domain-containing protein YP_001043915.1 2164675 D 349101 CDS YP_001043916.1 126462802 4897960 complement(2164942..2165268) 1 NC_009049.1 PFAM: arsenate reductase and related; KEGG: rsp:RSP_0387 hypothetical protein; arsenate reductase-like protein 2165268 4897960 Rsph17029_2041 Rhodobacter sphaeroides ATCC 17029 arsenate reductase-like protein YP_001043916.1 2164942 R 349101 CDS YP_001043917.1 126462803 4896737 complement(2165335..2165739) 1 NC_009049.1 KEGG: rsp:RSP_0388 hypothetical protein; hypothetical protein 2165739 4896737 Rsph17029_2042 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043917.1 2165335 R 349101 CDS YP_001043918.1 126462804 4895417 complement(2165773..2166252) 1 NC_009049.1 PFAM: dihydrofolate reductase region; KEGG: rsp:RSP_0389 dihydrofolate reductase; dihydrofolate reductase 2166252 4895417 Rsph17029_2043 Rhodobacter sphaeroides ATCC 17029 dihydrofolate reductase YP_001043918.1 2165773 R 349101 CDS YP_001043919.1 126462805 4895736 complement(2166252..2167148) 1 NC_009049.1 PFAM: thymidylate synthase; KEGG: rsp:RSP_0390 thymidylate synthase; thymidylate synthase 2167148 4895736 Rsph17029_2044 Rhodobacter sphaeroides ATCC 17029 thymidylate synthase YP_001043919.1 2166252 R 349101 CDS YP_001043920.1 126462806 4895959 2167435..2167863 1 NC_009049.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_0392 probable lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2167863 4895959 Rsph17029_2045 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001043920.1 2167435 D 349101 CDS YP_001043921.1 126462807 4897654 complement(2168025..2169095) 1 NC_009049.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: rsp:RSP_0393 probable riboflavin biosynthesis protein; riboflavin biosynthesis protein RibD 2169095 4897654 Rsph17029_2046 Rhodobacter sphaeroides ATCC 17029 riboflavin biosynthesis protein RibD YP_001043921.1 2168025 R 349101 CDS YP_001043922.1 126462808 4896208 complement(2169110..2169577) 1 NC_009049.1 PFAM: ATP-cone domain protein; KEGG: rsp:RSP_0394 hypothetical protein; transcriptional regulator NrdR 2169577 nrdR 4896208 nrdR Rhodobacter sphaeroides ATCC 17029 transcriptional regulator NrdR YP_001043922.1 2169110 R 349101 CDS YP_001043923.1 126462809 4896734 complement(2169799..2170179) 1 NC_009049.1 KEGG: rsp:RSP_0396 hypothetical protein; hypothetical protein 2170179 4896734 Rsph17029_2048 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043923.1 2169799 R 349101 CDS YP_001043924.1 126462810 4897206 complement(2170191..2172197) 1 NC_009049.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 2172197 4897206 Rsph17029_2049 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma factor RpoD YP_001043924.1 2170191 R 349101 CDS YP_001043925.1 126462811 4896458 complement(2172302..2174233) 1 NC_009049.1 synthesizes RNA primers at the replication forks; DNA primase 2174233 dnaG 4896458 dnaG Rhodobacter sphaeroides ATCC 17029 DNA primase YP_001043925.1 2172302 R 349101 CDS YP_001043926.1 126462812 4897089 complement(2174357..2175784) 1 NC_009049.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: rsp:RSP_0398 dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 2175784 4897089 Rsph17029_2051 Rhodobacter sphaeroides ATCC 17029 Glu/Leu/Phe/Val dehydrogenase YP_001043926.1 2174357 R 349101 CDS YP_001043927.1 126462813 4897499 2176148..2177848 1 NC_009049.1 KEGG: rsp:RSP_0399 hypothetical protein; hypothetical protein 2177848 4897499 Rsph17029_2052 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043927.1 2176148 D 349101 CDS YP_001043928.1 126462814 4896394 2177845..2178402 1 NC_009049.1 KEGG: rsp:RSP_0400 hypothetical protein; hypothetical protein 2178402 4896394 Rsph17029_2053 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043928.1 2177845 D 349101 CDS YP_001043929.1 126462815 4896385 2178406..2178942 1 NC_009049.1 KEGG: rsp:RSP_0401 hypothetical protein; hypothetical protein 2178942 4896385 Rsph17029_2054 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043929.1 2178406 D 349101 CDS YP_001043930.1 126462816 4897421 complement(2178991..2179611) 1 NC_009049.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_0402 transcriptional regulator, TetR family; TetR family transcriptional regulator 2179611 4897421 Rsph17029_2055 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001043930.1 2178991 R 349101 CDS YP_001043931.1 126462817 4896594 2179747..2179989 1 NC_009049.1 hypothetical protein 2179989 4896594 Rsph17029_2056 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043931.1 2179747 D 349101 CDS YP_001043932.1 126462818 4896601 2180079..2181365 1 NC_009049.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2181365 4896601 Rsph17029_2057 Rhodobacter sphaeroides ATCC 17029 homoserine dehydrogenase YP_001043932.1 2180079 D 349101 CDS YP_001043933.1 126462819 4896376 2181428..2182393 1 NC_009049.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2182393 glpX 4896376 glpX Rhodobacter sphaeroides ATCC 17029 fructose 1,6-bisphosphatase II YP_001043933.1 2181428 D 349101 CDS YP_001043934.1 126462820 4896171 2182390..2184141 1 NC_009049.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: rsp:RSP_0405 probable single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 2184141 4896171 Rsph17029_2059 Rhodobacter sphaeroides ATCC 17029 single-stranded-DNA-specific exonuclease RecJ YP_001043934.1 2182390 D 349101 CDS YP_001043935.1 126462821 4895914 complement(2184353..2185432) 1 NC_009049.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: rsp:RSP_0406 periplasmic sensor diguanylate cyclase (GGDEF); diguanylate cyclase 2185432 4895914 Rsph17029_2060 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase YP_001043935.1 2184353 R 349101 CDS YP_001043936.1 126462822 4895499 complement(2185609..2186604) 1 NC_009049.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_0407 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 2186604 4895499 Rsph17029_2061 Rhodobacter sphaeroides ATCC 17029 D-isomer specific 2-hydroxyacid dehydrogenase YP_001043936.1 2185609 R 349101 CDS YP_001043937.1 126462823 4895754 2186806..2187744 1 NC_009049.1 KEGG: rsp:RSP_0408 hypothetical protein; hypothetical protein 2187744 4895754 Rsph17029_2062 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043937.1 2186806 D 349101 CDS YP_001043938.1 126462824 4896871 2187762..2188619 1 NC_009049.1 PFAM: CHAD domain containing protein; KEGG: rsp:RSP_0409 hypothetical protein; CHAD domain-containing protein 2188619 4896871 Rsph17029_2063 Rhodobacter sphaeroides ATCC 17029 CHAD domain-containing protein YP_001043938.1 2187762 D 349101 CDS YP_001043939.1 126462825 4897961 complement(2188640..2189647) 1 NC_009049.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rsp:RSP_0410 sensor diguanylate cyclase (GGDEF); diguanylate cyclase 2189647 4897961 Rsph17029_2064 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase YP_001043939.1 2188640 R 349101 CDS YP_001043940.1 126462826 4895860 complement(2189647..2190234) 1 NC_009049.1 PFAM: Heme NO binding domain protein; KEGG: rsp:RSP_6114 hypothetical protein; heme NO binding domain-containing protein 2190234 4895860 Rsph17029_2065 Rhodobacter sphaeroides ATCC 17029 heme NO binding domain-containing protein YP_001043940.1 2189647 R 349101 CDS YP_001043941.1 126462827 4896420 complement(2190298..2192019) 1 NC_009049.1 KEGG: rsp:RSP_0411 hypothetical protein; hypothetical protein 2192019 4896420 Rsph17029_2066 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043941.1 2190298 R 349101 CDS YP_001043942.1 126462828 4896794 complement(2192142..2192834) 1 NC_009049.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0412 putative phosphatase; HAD family hydrolase 2192834 4896794 Rsph17029_2067 Rhodobacter sphaeroides ATCC 17029 HAD family hydrolase YP_001043942.1 2192142 R 349101 CDS YP_001043943.1 126462829 4897980 complement(2192890..2193168) 1 NC_009049.1 KEGG: rsp:RSP_6115 hypothetical protein; hypothetical protein 2193168 4897980 Rsph17029_2068 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043943.1 2192890 R 349101 CDS YP_001043944.1 126462830 4895128 2193297..2194682 1 NC_009049.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rsp:RSP_0413 two component diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 2194682 4895128 Rsph17029_2069 Rhodobacter sphaeroides ATCC 17029 response regulator receiver modulated diguanylate cyclase YP_001043944.1 2193297 D 349101 CDS YP_001043945.1 126462831 4896112 complement(2194835..2195362) 1 NC_009049.1 KEGG: rsp:RSP_0414 hypothetical protein; hypothetical protein 2195362 4896112 Rsph17029_2070 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043945.1 2194835 R 349101 CDS YP_001043946.1 126462832 4895263 complement(2195364..2195723) 1 NC_009049.1 KEGG: rsp:RSP_6227 hypothetical protein; hypothetical protein 2195723 4895263 Rsph17029_2071 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043946.1 2195364 R 349101 CDS YP_001043947.1 126462833 4898013 complement(2195725..2196318) 1 NC_009049.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2196318 4898013 Rsph17029_2072 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma factor YP_001043947.1 2195725 R 349101 CDS YP_001043948.1 126462834 4896258 complement(2196395..2197033) 1 NC_009049.1 SMART: Calcium-binding EF-hand-containing protein; KEGG: rsp:RSP_0416 putative calcium-binding EF-hand domain protein; signal transduction protein 2197033 4896258 Rsph17029_2073 Rhodobacter sphaeroides ATCC 17029 signal transduction protein YP_001043948.1 2196395 R 349101 CDS YP_001043949.1 126462835 4896752 2197235..2197645 1 NC_009049.1 PFAM: protein of unknown function DUF983; KEGG: rsp:RSP_0418 hypothetical protein; hypothetical protein 2197645 4896752 Rsph17029_2074 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043949.1 2197235 D 349101 CDS YP_001043950.1 126462836 4896470 2197614..2198291 1 NC_009049.1 PFAM: NUDIX hydrolase; KEGG: rsp:RSP_0419 hypothetical protein; NUDIX hydrolase 2198291 4896470 Rsph17029_2075 Rhodobacter sphaeroides ATCC 17029 NUDIX hydrolase YP_001043950.1 2197614 D 349101 CDS YP_001043951.1 126462837 4895628 complement(2198360..2198734) 1 NC_009049.1 KEGG: rsp:RSP_0420 hypothetical protein; hypothetical protein 2198734 4895628 Rsph17029_2076 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043951.1 2198360 R 349101 CDS YP_001043952.1 126462838 4897488 complement(2198750..2199250) 1 NC_009049.1 PFAM: Lipocalin family protein; KEGG: rsp:RSP_0421 putative outer membrane lipoprotein Blc; lipocalin family protein 2199250 4897488 Rsph17029_2077 Rhodobacter sphaeroides ATCC 17029 lipocalin family protein YP_001043952.1 2198750 R 349101 CDS YP_001043953.1 126462839 4896550 complement(2199238..2199684) 1 NC_009049.1 KEGG: rsp:RSP_0422 hypothetical protein; hypothetical protein 2199684 4896550 Rsph17029_2078 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043953.1 2199238 R 349101 CDS YP_001043954.1 126462840 4897979 complement(2199763..2200803) 1 NC_009049.1 PFAM: aldo/keto reductase; KEGG: rsp:RSP_0423 aldo/keto reductase; aldo/keto reductase 2200803 4897979 Rsph17029_2079 Rhodobacter sphaeroides ATCC 17029 aldo/keto reductase YP_001043954.1 2199763 R 349101 CDS YP_001043955.1 126462841 4895749 2201070..2201678 1 NC_009049.1 KEGG: rsp:RSP_0424 hypothetical protein; hypothetical protein 2201678 4895749 Rsph17029_2080 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043955.1 2201070 D 349101 CDS YP_001043956.1 126462842 4896544 2201822..2203540 1 NC_009049.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2203540 4896544 Rsph17029_2081 Rhodobacter sphaeroides ATCC 17029 methionyl-tRNA synthetase YP_001043956.1 2201822 D 349101 CDS YP_001043957.1 126462843 4897016 complement(2203817..2206315) 1 NC_009049.1 PFAM: cyclic nucleotide-binding; sodium/hydrogen exchanger; KEGG: rsp:RSP_0426 putative Na+/H+ antiporter with cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 2206315 4897016 Rsph17029_2082 Rhodobacter sphaeroides ATCC 17029 cyclic nucleotide-binding protein YP_001043957.1 2203817 R 349101 CDS YP_001043958.1 126462844 4896907 complement(2206389..2206718) 1 NC_009049.1 KEGG: rsp:RSP_0427 hypothetical protein; hypothetical protein 2206718 4896907 Rsph17029_2083 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043958.1 2206389 R 349101 CDS YP_001043959.1 126462845 4895310 complement(2207062..2208384) 1 NC_009049.1 KEGG: rsp:RSP_0428 hypothetical protein; hypothetical protein 2208384 4895310 Rsph17029_2084 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043959.1 2207062 R 349101 CDS YP_001043960.1 126462846 4896807 2208647..2210503 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0429 probable ABC drug/toxin efflux transporter; fused ATPase and inner membrane subunits; ABC transporter 2210503 4896807 Rsph17029_2085 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001043960.1 2208647 D 349101 CDS YP_001043961.1 126462847 4897122 complement(2210526..2210747) 1 NC_009049.1 KEGG: rsp:RSP_6228 hypothetical protein; hypothetical protein 2210747 4897122 Rsph17029_2086 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043961.1 2210526 R 349101 CDS YP_001043962.1 126462848 4895765 2210953..2211888 1 NC_009049.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rsp:RSP_0430 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 2211888 4895765 Rsph17029_2087 Rhodobacter sphaeroides ATCC 17029 cobalamin biosynthesis protein CobD YP_001043962.1 2210953 D 349101 CDS YP_001043963.1 126462849 4896117 complement(2212090..2213310) 1 NC_009049.1 TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: rsp:RSP_0431 putative selenocysteine lyase; SufS subfamily cysteine desulfurase 2213310 4896117 Rsph17029_2088 Rhodobacter sphaeroides ATCC 17029 SufS subfamily cysteine desulfurase YP_001043963.1 2212090 R 349101 CDS YP_001043964.1 126462850 4895632 complement(2213320..2213898) 1 NC_009049.1 KEGG: rsp:RSP_0432 hypothetical protein; hypothetical protein 2213898 4895632 Rsph17029_2089 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043964.1 2213320 R 349101 CDS YP_001043965.1 126462851 4897530 complement(2213895..2214374) 1 NC_009049.1 KEGG: rsp:RSP_0433 hypothetical protein; hypothetical protein 2214374 4897530 Rsph17029_2090 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043965.1 2213895 R 349101 CDS YP_001043966.1 126462852 4897562 complement(2214375..2215658) 1 NC_009049.1 PFAM: SufBD protein; KEGG: rde:RD1_2692 FeS assembly protein SufD, putative; SufBD protein 2215658 4897562 Rsph17029_2091 Rhodobacter sphaeroides ATCC 17029 SufBD protein YP_001043966.1 2214375 R 349101 CDS YP_001043967.1 126462853 4896326 complement(2215658..2216416) 1 NC_009049.1 KEGG: rsp:RSP_0437 Suf C, ATPase; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 2216416 4896326 Rsph17029_2092 Rhodobacter sphaeroides ATCC 17029 FeS assembly ATPase SufC YP_001043967.1 2215658 R 349101 CDS YP_001043968.1 126462854 4895867 complement(2216426..2216737) 1 NC_009049.1 PFAM: protein of unknown function DUF74; KEGG: rsp:RSP_0439 hypothetical protein; hypothetical protein 2216737 4895867 Rsph17029_2093 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043968.1 2216426 R 349101 CDS YP_001043969.1 126462855 4895974 complement(2216772..2218301) 1 NC_009049.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2218301 4895974 Rsph17029_2094 Rhodobacter sphaeroides ATCC 17029 cysteine desulfurase activator complex subunit SufB YP_001043969.1 2216772 R 349101 CDS YP_001043970.1 126462856 4897015 complement(2218377..2219423) 1 NC_009049.1 PFAM: aminotransferase, class V; KEGG: rsp:RSP_0442 putative aminotransferase; cysteine desulfurase 2219423 4897015 Rsph17029_2095 Rhodobacter sphaeroides ATCC 17029 cysteine desulfurase YP_001043970.1 2218377 R 349101 CDS YP_001043971.1 126462857 4897920 complement(2219506..2219973) 1 NC_009049.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rsp:RSP_0443 Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2219973 4897920 Rsph17029_2096 Rhodobacter sphaeroides ATCC 17029 BadM/Rrf2 family transcriptional regulator YP_001043971.1 2219506 R 349101 CDS YP_001043972.1 126462858 4895481 2220127..2220786 1 NC_009049.1 KEGG: rsp:RSP_0444 hypothetical protein; hypothetical protein 2220786 4895481 Rsph17029_2097 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043972.1 2220127 D 349101 CDS YP_001043973.1 126462859 4896621 2220783..2221367 1 NC_009049.1 KEGG: rsp:RSP_0445 hypothetical protein; hypothetical protein 2221367 4896621 Rsph17029_2098 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043973.1 2220783 D 349101 CDS YP_001043974.1 126462860 4896564 2221452..2222666 1 NC_009049.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2222666 4896564 Rsph17029_2099 Rhodobacter sphaeroides ATCC 17029 isocitrate dehydrogenase YP_001043974.1 2221452 D 349101 CDS YP_001043975.1 126462861 4896289 2222976..2223578 1 NC_009049.1 PFAM: protein of unknown function DUF161; KEGG: rsp:RSP_0447 hypothetical protein; hypothetical protein 2223578 4896289 Rsph17029_2100 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043975.1 2222976 D 349101 CDS YP_001043976.1 126462862 4896411 2223678..2225498 1 NC_009049.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rsp:RSP_0448 EF-Tu; elongation factor Tu; GTP-binding protein TypA 2225498 4896411 Rsph17029_2101 Rhodobacter sphaeroides ATCC 17029 GTP-binding protein TypA YP_001043976.1 2223678 D 349101 CDS YP_001043977.1 126462863 4897378 complement(2225543..2226337) 1 NC_009049.1 KEGG: rsp:RSP_0449 putative glutamine amidotransferase; putative glutamine amidotransferase 2226337 4897378 Rsph17029_2102 Rhodobacter sphaeroides ATCC 17029 putative glutamine amidotransferase YP_001043977.1 2225543 R 349101 CDS YP_001043978.1 126462864 4897503 complement(2226493..2226783) 1 NC_009049.1 PFAM: protein of unknown function DUF1330; KEGG: rsp:RSP_0450 hypothetical protein; hypothetical protein 2226783 4897503 Rsph17029_2103 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043978.1 2226493 R 349101 CDS YP_001043979.1 126462865 4897394 complement(2226785..2229436) 1 NC_009049.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2229436 alaS 4897394 alaS Rhodobacter sphaeroides ATCC 17029 alanyl-tRNA synthetase YP_001043979.1 2226785 R 349101 CDS YP_001043980.1 126462866 4897662 complement(2229523..2230596) 1 NC_009049.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2230596 recA 4897662 recA Rhodobacter sphaeroides ATCC 17029 recombinase A YP_001043980.1 2229523 R 349101 CDS YP_001043981.1 126462867 4897598 2230791..2231381 1 NC_009049.1 KEGG: rsp:RSP_0453 hypothetical protein; hypothetical protein 2231381 4897598 Rsph17029_2106 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043981.1 2230791 D 349101 CDS YP_001043982.1 126462868 4897474 complement(2231385..2233697) 1 NC_009049.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_0454 multisensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 2233697 4897474 Rsph17029_2107 Rhodobacter sphaeroides ATCC 17029 multi-sensor hybrid histidine kinase YP_001043982.1 2231385 R 349101 CDS YP_001043983.1 126462869 4897393 complement(2233785..2234948) 1 NC_009049.1 PFAM: Fmu (Sun) domain protein; KEGG: rsp:RSP_0455 possible NOL1/NOP2/sun family protein; Fmu (Sun) domain-containing protein 2234948 4897393 Rsph17029_2108 Rhodobacter sphaeroides ATCC 17029 Fmu (Sun) domain-containing protein YP_001043983.1 2233785 R 349101 CDS YP_001043984.1 126462870 4897230 2235039..2235818 1 NC_009049.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_0457 probable glycerol-3-phosphate regulon repressor; DeoR family transcriptional regulator 2235818 4897230 Rsph17029_2109 Rhodobacter sphaeroides ATCC 17029 DeoR family transcriptional regulator YP_001043984.1 2235039 D 349101 CDS YP_001043985.1 126462871 4897033 complement(2235815..2236522) 1 NC_009049.1 KEGG: rsp:RSP_0456 hypothetical protein; hypothetical protein 2236522 4897033 Rsph17029_2110 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043985.1 2235815 R 349101 CDS YP_001043986.1 126462872 4896710 complement(2236500..2236916) 1 NC_009049.1 KEGG: rsp:RSP_0458 hypothetical protein; hypothetical protein 2236916 4896710 Rsph17029_2111 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043986.1 2236500 R 349101 CDS YP_001043987.1 126462873 4896542 2237210..2238292 1 NC_009049.1 PFAM: protein of unknown function DUF475; KEGG: rsp:RSP_0459 hypothetical protein; hypothetical protein 2238292 4896542 Rsph17029_2112 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043987.1 2237210 D 349101 CDS YP_001043988.1 126462874 4896212 complement(2238636..2241827) 1 NC_009049.1 PFAM: acriflavin resistance protein; KEGG: rsp:RSP_0460 AcrB/AcrD/AcrF family cation/multidrug efflux pump; acriflavin resistance protein 2241827 4896212 Rsph17029_2113 Rhodobacter sphaeroides ATCC 17029 acriflavin resistance protein YP_001043988.1 2238636 R 349101 CDS YP_001043989.1 126462875 4896529 complement(2241820..2242773) 1 NC_009049.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rsp:RSP_0461 multidrug/cation efflux pump, membrane fusion protein (MFP) family; RND family efflux transporter MFP subunit 2242773 4896529 Rsph17029_2114 Rhodobacter sphaeroides ATCC 17029 RND family efflux transporter MFP subunit YP_001043989.1 2241820 R 349101 CDS YP_001043990.1 126462876 4895543 complement(2243119..2244006) 1 NC_009049.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rsp:RSP_0463 cation efflux transporter, CDF family; cation diffusion facilitator family transporter 2244006 4895543 Rsph17029_2115 Rhodobacter sphaeroides ATCC 17029 cation diffusion facilitator family transporter YP_001043990.1 2243119 R 349101 CDS YP_001043991.1 126462877 4895554 complement(2244137..2245033) 1 NC_009049.1 PFAM: peptidase U32; KEGG: rsp:RSP_0464 putative protease; peptidase U32 2245033 4895554 Rsph17029_2116 Rhodobacter sphaeroides ATCC 17029 peptidase U32 YP_001043991.1 2244137 R 349101 CDS YP_001043992.1 126462878 4895395 complement(2245038..2246018) 1 NC_009049.1 PFAM: peptidase U32; KEGG: rsp:RSP_0465 putative protease; peptidase U32 2246018 4895395 Rsph17029_2117 Rhodobacter sphaeroides ATCC 17029 peptidase U32 YP_001043992.1 2245038 R 349101 CDS YP_001043993.1 126462879 4896131 complement(2246018..2246542) 1 NC_009049.1 KEGG: rsp:RSP_0466 hypothetical protein; hypothetical protein 2246542 4896131 Rsph17029_2118 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043993.1 2246018 R 349101 CDS YP_001043994.1 126462880 4895601 2246667..2248160 1 NC_009049.1 TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: rsp:RSP_0467 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 2248160 4895601 Rsph17029_2119 Rhodobacter sphaeroides ATCC 17029 UbiD family decarboxylase YP_001043994.1 2246667 D 349101 CDS YP_001043995.1 126462881 4895195 2248157..2248711 1 NC_009049.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: rsp:RSP_0468 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2248711 4895195 Rsph17029_2120 Rhodobacter sphaeroides ATCC 17029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001043995.1 2248157 D 349101 CDS YP_001043996.1 126462882 4895762 complement(2248839..2250029) 1 NC_009049.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 2250029 4895762 Rsph17029_2121 Rhodobacter sphaeroides ATCC 17029 hydroxyglutarate oxidase YP_001043996.1 2248839 R 349101 CDS YP_001043997.1 126462883 4895149 complement(2250144..2251661) 1 NC_009049.1 KEGG: rsp:RSP_0470 hypothetical protein; hypothetical protein 2251661 4895149 Rsph17029_2122 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043997.1 2250144 R 349101 CDS YP_001043998.1 126462884 4896980 2251821..2252153 1 NC_009049.1 KEGG: rsp:RSP_6116 hypothetical protein; hypothetical protein 2252153 4896980 Rsph17029_2123 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001043998.1 2251821 D 349101 CDS YP_001043999.1 126462885 4897254 2252258..2252980 1 NC_009049.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_0472 hypothetical protein; endonuclease/exonuclease/phosphatase 2252980 4897254 Rsph17029_2124 Rhodobacter sphaeroides ATCC 17029 endonuclease/exonuclease/phosphatase YP_001043999.1 2252258 D 349101 CDS YP_001044000.1 126462886 4896374 2252977..2254527 1 NC_009049.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: rsp:RSP_0473 phospholipase-D family protein; phospholipase D/transphosphatidylase 2254527 4896374 Rsph17029_2125 Rhodobacter sphaeroides ATCC 17029 phospholipase D/transphosphatidylase YP_001044000.1 2252977 D 349101 CDS YP_001044001.1 126462887 4897671 2254747..2255196 1 NC_009049.1 PFAM: cytochrome c, class II; KEGG: rsp:RSP_0474 cytochrome c'; cytochrome c, class II 2255196 4897671 Rsph17029_2126 Rhodobacter sphaeroides ATCC 17029 cytochrome c, class II YP_001044001.1 2254747 D 349101 CDS YP_001044002.1 126462888 4896986 2255200..2255799 1 NC_009049.1 PFAM: cytochrome B561; KEGG: rsp:RSP_0475 cytochrome b; cytochrome B561 2255799 4896986 Rsph17029_2127 Rhodobacter sphaeroides ATCC 17029 cytochrome B561 YP_001044002.1 2255200 D 349101 CDS YP_001044003.1 126462889 4897446 complement(2255838..2256482) 1 NC_009049.1 PFAM: class II aldolase/adducin family protein; KEGG: rsp:RSP_0476 L-fuculose-phosphate aldolase; L-fuculose phosphate aldolase 2256482 4897446 Rsph17029_2128 Rhodobacter sphaeroides ATCC 17029 L-fuculose phosphate aldolase YP_001044003.1 2255838 R 349101 CDS YP_001044004.1 126462890 4897374 2256819..2258315 1 NC_009049.1 KEGG: rsp:RSP_0477 hypothetical protein; hypothetical protein 2258315 4897374 Rsph17029_2129 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044004.1 2256819 D 349101 CDS YP_001044005.1 126462891 4897316 complement(2258446..2259573) 1 NC_009049.1 PFAM: tRNA synthetase, class II (D, K and N); KEGG: rsp:RSP_0478 putative lysyl-tRNA synthetase; lysine--tRNA ligase 2259573 4897316 Rsph17029_2130 Rhodobacter sphaeroides ATCC 17029 lysine--tRNA ligase YP_001044005.1 2258446 R 349101 CDS YP_001044006.1 126462892 4897580 2259585..2260151 1 NC_009049.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2260151 4897580 Rsph17029_2131 Rhodobacter sphaeroides ATCC 17029 elongation factor P YP_001044006.1 2259585 D 349101 CDS YP_001044007.1 126462893 4897637 complement(2260239..2261633) 1 NC_009049.1 PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: rsp:RSP_0480 D-mannonate oxidoreductase; fructuronate reductase 2261633 4897637 Rsph17029_2132 Rhodobacter sphaeroides ATCC 17029 fructuronate reductase YP_001044007.1 2260239 R 349101 CDS YP_001044008.1 126462894 4897651 complement(2261623..2262348) 1 NC_009049.1 TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0481 possible 2-deoxy-D-gluconate 3-dehydrogenase; 2-deoxy-D-gluconate 3-dehydrogenase 2262348 4897651 Rsph17029_2133 Rhodobacter sphaeroides ATCC 17029 2-deoxy-D-gluconate 3-dehydrogenase YP_001044008.1 2261623 R 349101 CDS YP_001044009.1 126462895 4897672 complement(2262345..2263169) 1 NC_009049.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2263169 4897672 Rsph17029_2134 Rhodobacter sphaeroides ATCC 17029 5-keto-4-deoxyuronate isomerase YP_001044009.1 2262345 R 349101 CDS YP_001044010.1 126462896 4895531 complement(2263311..2263613) 1 NC_009049.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_0483 hypothetical protein; cupin 2263613 4895531 Rsph17029_2135 Rhodobacter sphaeroides ATCC 17029 cupin YP_001044010.1 2263311 R 349101 CDS YP_001044011.1 126462897 4895338 complement(2263621..2264901) 1 NC_009049.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_0484 TRAP-T family transporter, DctM (12 TMs) subunit; TRAP dicarboxylate transporter subunit DctM 2264901 4895338 Rsph17029_2136 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001044011.1 2263621 R 349101 CDS YP_001044012.1 126462898 4895307 complement(2264904..2265449) 1 NC_009049.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0485 TRAP-T family transporter, DctQ (4 TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ 2265449 4895307 Rsph17029_2137 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001044012.1 2264904 R 349101 CDS YP_001044013.1 126462899 4895223 complement(2265513..2266490) 1 NC_009049.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0487 TRAP-T family transporter, DctP (periplasmic binding) subunit; TRAP dicarboxylate transporter subunit DctP 2266490 4895223 Rsph17029_2138 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctP YP_001044013.1 2265513 R 349101 CDS YP_001044014.1 126462900 4896596 complement(2266516..2267922) 1 NC_009049.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 2267922 4896596 Rsph17029_2139 Rhodobacter sphaeroides ATCC 17029 glucuronate isomerase YP_001044014.1 2266516 R 349101 CDS YP_001044015.1 126462901 4896676 2268026..2268742 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_0489 GntR family transcriptional regulator; GntR family transcriptional regulator 2268742 4896676 Rsph17029_2140 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001044015.1 2268026 D 349101 CDS YP_001044016.1 126462902 4895630 2268724..2269632 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_0490 carbohydrate kinase; ribokinase-like domain-containing protein 2269632 4895630 Rsph17029_2141 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001044016.1 2268724 D 349101 CDS YP_001044017.1 126462903 4895214 2270059..2271390 1 NC_009049.1 KEGG: rsp:RSP_0491 hydrogen uptake histidine-kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2271390 4895214 Rsph17029_2142 Rhodobacter sphaeroides ATCC 17029 PAS/PAC sensor signal transduction histidine kinase YP_001044017.1 2270059 D 349101 CDS YP_001044018.1 126462904 4896234 2271387..2272379 1 NC_009049.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: rsp:RSP_0492 hydrogenase small subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit 2272379 4896234 Rsph17029_2143 Rhodobacter sphaeroides ATCC 17029 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_001044018.1 2271387 D 349101 CDS YP_001044019.1 126462905 4896179 2272376..2273803 1 NC_009049.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rsp:RSP_0493 hydrogenase large subunit; hydrogen:quinone oxidoreductase 2273803 4896179 Rsph17029_2144 Rhodobacter sphaeroides ATCC 17029 hydrogen:quinone oxidoreductase YP_001044019.1 2272376 D 349101 CDS YP_001044020.1 126462906 4897238 2273965..2276241 1 NC_009049.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: rsp:RSP_0494 hydrogenase maturation factor F; (NiFe) hydrogenase maturation protein HypF 2276241 4897238 Rsph17029_2145 Rhodobacter sphaeroides ATCC 17029 (NiFe) hydrogenase maturation protein HypF YP_001044020.1 2273965 D 349101 CDS YP_001044021.1 126462907 4897103 2276478..2277587 1 NC_009049.1 KEGG: rsp:RSP_0495 hydrogenase protein small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 2277587 4897103 Rsph17029_2146 Rhodobacter sphaeroides ATCC 17029 hydrogenase (NiFe) small subunit HydA YP_001044021.1 2276478 D 349101 CDS YP_001044022.1 126462908 4896867 2277591..2279381 1 NC_009049.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rsp:RSP_0496 hydrogenase protein large subunit; nickel-dependent hydrogenase, large subunit 2279381 4896867 Rsph17029_2147 Rhodobacter sphaeroides ATCC 17029 nickel-dependent hydrogenase, large subunit YP_001044022.1 2277591 D 349101 CDS YP_001044023.1 126462909 4896451 2279393..2279968 1 NC_009049.1 PFAM: HupE/UreJ protein; KEGG: rsp:RSP_0497 HupE/UreJ accessory protein; HupE/UreJ protein 2279968 4896451 Rsph17029_2148 Rhodobacter sphaeroides ATCC 17029 HupE/UreJ protein YP_001044023.1 2279393 D 349101 CDS YP_001044024.1 126462910 4896462 2279973..2280758 1 NC_009049.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: rsp:RSP_0498 Ni, Fe hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 2280758 4896462 Rsph17029_2149 Rhodobacter sphaeroides ATCC 17029 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001044024.1 2279973 D 349101 CDS YP_001044025.1 126462911 4896543 2281049..2281669 1 NC_009049.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; KEGG: rsp:RSP_0499 HycI, hydrogenase maturation protease; hydrogenase expression/formation protein 2281669 4896543 Rsph17029_2150 Rhodobacter sphaeroides ATCC 17029 hydrogenase expression/formation protein YP_001044025.1 2281049 D 349101 CDS YP_001044026.1 126462912 4897258 2281669..2281986 1 NC_009049.1 PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rsp:RSP_0500 putative HupF/HypC hydrogenase protein; hydrogenase expression/formation protein HupF/HypC 2281986 4897258 Rsph17029_2151 Rhodobacter sphaeroides ATCC 17029 hydrogenase expression/formation protein HupF/HypC YP_001044026.1 2281669 D 349101 CDS YP_001044027.1 126462913 4895204 2281983..2282369 1 NC_009049.1 PFAM: hydrogenase-1 expression HyaE; KEGG: rsp:RSP_0501 HupG hydrogenase expression/formation protein; hydrogenase-1 expression HyaE 2282369 4895204 Rsph17029_2152 Rhodobacter sphaeroides ATCC 17029 hydrogenase-1 expression HyaE YP_001044027.1 2281983 D 349101 CDS YP_001044028.1 126462914 4896398 2282381..2283199 1 NC_009049.1 PFAM: HupH hydrogenase expression protein; KEGG: rsp:RSP_0502 HupH hydrogenase expression/formation protein; HupH hydrogenase expression protein 2283199 4896398 Rsph17029_2153 Rhodobacter sphaeroides ATCC 17029 HupH hydrogenase expression protein YP_001044028.1 2282381 D 349101 CDS YP_001044029.1 126462915 4896427 2283196..2283954 1 NC_009049.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rsp:RSP_0503 HupJ, contains rubredoxin domain; rubredoxin-type Fe(Cys)4 protein 2283954 4896427 Rsph17029_2154 Rhodobacter sphaeroides ATCC 17029 rubredoxin-type Fe(Cys)4 protein YP_001044029.1 2283196 D 349101 CDS YP_001044030.1 126462916 4897020 2283951..2284763 1 NC_009049.1 KEGG: rsp:RSP_0504 HupK; HupK protein 2284763 4897020 Rsph17029_2155 Rhodobacter sphaeroides ATCC 17029 HupK protein YP_001044030.1 2283951 D 349101 CDS YP_001044031.1 126462917 4897783 2284756..2285097 1 NC_009049.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: rsp:RSP_0505 hydrogenase expression/synthesis, HypA family; hydrogenase nickel incorporation protein HypA 2285097 4897783 Rsph17029_2156 Rhodobacter sphaeroides ATCC 17029 hydrogenase nickel incorporation protein HypA YP_001044031.1 2284756 D 349101 CDS YP_001044032.1 126462918 4898093 2285097..2285966 1 NC_009049.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: rsp:RSP_0506 NI2+-binding GTPase protein HypB; hydrogenase nickel incorporation protein HypB 2285966 4898093 Rsph17029_2157 Rhodobacter sphaeroides ATCC 17029 hydrogenase nickel incorporation protein HypB YP_001044032.1 2285097 D 349101 CDS YP_001044033.1 126462919 4896225 2285966..2287441 1 NC_009049.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; KEGG: rsp:RSP_0507 HupR response regulator; two component, sigma54 specific, Fis family transcriptional regulator 2287441 4896225 Rsph17029_2158 Rhodobacter sphaeroides ATCC 17029 two component, sigma54 specific, Fis family transcriptional regulator YP_001044033.1 2285966 D 349101 CDS YP_001044034.1 126462920 4896237 2287443..2287733 1 NC_009049.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rsp:RSP_0508 hydrogenase expression/formation protein HypC; hydrogenase assembly chaperone HypC/HupF 2287733 4896237 Rsph17029_2159 Rhodobacter sphaeroides ATCC 17029 hydrogenase assembly chaperone HypC/HupF YP_001044034.1 2287443 D 349101 CDS YP_001044035.1 126462921 4895213 2287730..2288869 1 NC_009049.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rsp:RSP_0509 hydrogenase isoenzyme formation protein HypD; hydrogenase expression/formation protein HypD 2288869 4895213 Rsph17029_2160 Rhodobacter sphaeroides ATCC 17029 hydrogenase expression/formation protein HypD YP_001044035.1 2287730 D 349101 CDS YP_001044036.1 126462922 4896222 2288920..2289942 1 NC_009049.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rsp:RSP_0510 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2289942 4896222 Rsph17029_2161 Rhodobacter sphaeroides ATCC 17029 hydrogenase expression/formation protein HypE YP_001044036.1 2288920 D 349101 CDS YP_001044037.1 126462923 4896134 2290010..2290405 1 NC_009049.1 SMART: Rhodanese domain protein; KEGG: rsp:RSP_6117 hypothetical protein containing PspE/rhodanese-related domain; rhodanese domain-containing protein 2290405 4896134 Rsph17029_2162 Rhodobacter sphaeroides ATCC 17029 rhodanese domain-containing protein YP_001044037.1 2290010 D 349101 CDS YP_001044038.1 126462924 4896803 2290458..2291033 1 NC_009049.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_0511 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2291033 4896803 Rsph17029_2163 Rhodobacter sphaeroides ATCC 17029 two component LuxR family transcriptional regulator YP_001044038.1 2290458 D 349101 CDS YP_001044039.1 126462925 4895385 2291247..2294072 1 NC_009049.1 KEGG: rsp:RSP_0512 multisensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 2294072 4895385 Rsph17029_2164 Rhodobacter sphaeroides ATCC 17029 PAS/PAC sensor hybrid histidine kinase YP_001044039.1 2291247 D 349101 CDS YP_001044040.1 126462926 4895484 complement(2294076..2295503) 1 NC_009049.1 PFAM: glycoside hydrolase, family 16; Hemolysin-type calcium-binding region; KEGG: rsp:RSP_0513 hypothetical protein; glycoside hydrolase 2295503 4895484 Rsph17029_2165 Rhodobacter sphaeroides ATCC 17029 glycoside hydrolase YP_001044040.1 2294076 R 349101 CDS YP_001044041.1 126462927 4895513 complement(2295684..2296697) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0514 dTDP-glucose 4,6-dehydratase protein; NAD-dependent epimerase/dehydratase 2296697 4895513 Rsph17029_2166 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001044041.1 2295684 R 349101 CDS YP_001044042.1 126462928 4895532 complement(2296760..2297836) 1 NC_009049.1 KEGG: rsp:RSP_0515 hypothetical protein; hypothetical protein 2297836 4895532 Rsph17029_2167 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044042.1 2296760 R 349101 CDS YP_001044043.1 126462929 4897663 complement(2297833..2298924) 1 NC_009049.1 KEGG: rsp:RSP_0516 hypothetical protein; hypothetical protein 2298924 4897663 Rsph17029_2168 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044043.1 2297833 R 349101 CDS YP_001044044.1 126462930 4897645 complement(2298924..2300033) 1 NC_009049.1 KEGG: rsp:RSP_0517 hypothetical protein; hypothetical protein 2300033 4897645 Rsph17029_2169 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044044.1 2298924 R 349101 CDS YP_001044045.1 126462931 4897616 complement(2300035..2301135) 1 NC_009049.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_0518 putative glycosyltransferase protein; group 1 glycosyl transferase 2301135 4897616 Rsph17029_2170 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001044045.1 2300035 R 349101 CDS YP_001044046.1 126462932 4897527 complement(2301132..2303150) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0519 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2303150 4897527 Rsph17029_2171 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001044046.1 2301132 R 349101 CDS YP_001044047.1 126462933 4897367 complement(2303147..2304253) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KR; KEGG: rsp:RSP_0520 NAD-dependent dehydratase/epimerase; NAD-dependent epimerase/dehydratase 2304253 4897367 Rsph17029_2172 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001044047.1 2303147 R 349101 CDS YP_001044048.1 126462934 4897437 2304542..2305489 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0521 putative Zn-containing dehydrogenase; alcohol dehydrogenase 2305489 4897437 Rsph17029_2173 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001044048.1 2304542 D 349101 CDS YP_001044049.1 126462935 4897485 2305480..2306505 1 NC_009049.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rsp:RSP_0522 putative oxidoreductase; oxidoreductase domain-containing protein 2306505 4897485 Rsph17029_2174 Rhodobacter sphaeroides ATCC 17029 oxidoreductase domain-containing protein YP_001044049.1 2305480 D 349101 CDS YP_001044050.1 126462936 4895943 2306512..2307300 1 NC_009049.1 PFAM: Ku domain protein; KEGG: rsp:RSP_0523 hypothetical protein; Ku domain-containing protein 2307300 4895943 Rsph17029_2175 Rhodobacter sphaeroides ATCC 17029 Ku domain-containing protein YP_001044050.1 2306512 D 349101 CDS YP_001044051.1 126462937 4897311 complement(2307403..2308206) 1 NC_009049.1 PFAM: Ku domain protein; KEGG: rsp:RSP_0524 hypothetical protein; Ku domain-containing protein 2308206 4897311 Rsph17029_2176 Rhodobacter sphaeroides ATCC 17029 Ku domain-containing protein YP_001044051.1 2307403 R 349101 CDS YP_001044052.1 126462938 4895362 2308368..2309027 1 NC_009049.1 PFAM: Hly-III family protein; KEGG: rsp:RSP_0525 hypothetical protein; Hly-III family protein 2309027 4895362 Rsph17029_2177 Rhodobacter sphaeroides ATCC 17029 Hly-III family protein YP_001044052.1 2308368 D 349101 CDS YP_001044053.1 126462939 4896191 2309037..2309468 1 NC_009049.1 KEGG: rsp:RSP_0526 hypothetical protein; hypothetical protein 2309468 4896191 Rsph17029_2178 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044053.1 2309037 D 349101 CDS YP_001044054.1 126462940 4895952 complement(2309501..2310805) 1 NC_009049.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_0527 sigma-54, RpoN; RNA polymerase sigma 54 subunit RpoN 2310805 4895952 Rsph17029_2179 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma 54 subunit RpoN YP_001044054.1 2309501 R 349101 CDS YP_001044055.1 126462941 4895947 complement(2310906..2311232) 1 NC_009049.1 associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage; nitrogenase stabilizing/protective protein 2311232 nifW 4895947 nifW Rhodobacter sphaeroides ATCC 17029 nitrogenase stabilizing/protective protein YP_001044055.1 2310906 R 349101 CDS YP_001044056.1 126462942 4896848 complement(2311243..2312418) 1 NC_009049.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: rsp:RSP_0529 homocitrate synthase; homocitrate synthase 2312418 4896848 Rsph17029_2181 Rhodobacter sphaeroides ATCC 17029 homocitrate synthase YP_001044056.1 2311243 R 349101 CDS YP_001044057.1 126462943 4896150 complement(2312418..2313584) 1 NC_009049.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsp:RSP_0530 cysteine desulfurase; class V aminotransferase 2313584 4896150 Rsph17029_2182 Rhodobacter sphaeroides ATCC 17029 class V aminotransferase YP_001044057.1 2312418 R 349101 CDS YP_001044058.1 126462944 4895946 complement(2313581..2314321) 1 NC_009049.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rsp:RSP_0531 nitrogen fixation protein; NifU domain-containing protein 2314321 4895946 Rsph17029_2183 Rhodobacter sphaeroides ATCC 17029 NifU domain-containing protein YP_001044058.1 2313581 R 349101 CDS YP_001044059.1 126462945 4896902 complement(2314331..2314651) 1 NC_009049.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rsp:RSP_0532 hypothetical protein; iron-sulfur cluster assembly accessory protein 2314651 4896902 Rsph17029_2184 Rhodobacter sphaeroides ATCC 17029 iron-sulfur cluster assembly accessory protein YP_001044059.1 2314331 R 349101 CDS YP_001044060.1 126462946 4895979 complement(2315207..2315746) 1 NC_009049.1 PFAM: NifQ family protein; KEGG: rsp:RSP_0533 putative nitrogen fixation protein NifQ; NifQ family protein 2315746 4895979 Rsph17029_2185 Rhodobacter sphaeroides ATCC 17029 NifQ family protein YP_001044060.1 2315207 R 349101 CDS YP_001044061.1 126462947 4896372 complement(2315727..2316029) 1 NC_009049.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_0534 putative dimeric ferredoxin (FdIII); 4Fe-4S ferredoxin 2316029 4896372 Rsph17029_2186 Rhodobacter sphaeroides ATCC 17029 4Fe-4S ferredoxin YP_001044061.1 2315727 R 349101 CDS YP_001044062.1 126462948 4896806 complement(2316140..2316610) 1 NC_009049.1 PFAM: protein of unknown function DUF269; KEGG: rsp:RSP_0535 hypothetical protein; hypothetical protein 2316610 4896806 Rsph17029_2187 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044062.1 2316140 R 349101 CDS YP_001044063.1 126462949 4896611 complement(2316607..2317041) 1 NC_009049.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: rsp:RSP_0536 putative nitrogenase molybdenum-iron protein NifX; nitrogen fixation protein NifX 2317041 4896611 Rsph17029_2188 Rhodobacter sphaeroides ATCC 17029 nitrogen fixation protein NifX YP_001044063.1 2316607 R 349101 CDS YP_001044064.1 126462950 4895724 complement(2317055..2319886) 1 NC_009049.1 in some organisms the NifE and NifN proteins are encoded separately; functions in assembly of FeMo cofactor; functions in assembly of nitrogenase MoFe; bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN 2319886 4895724 Rsph17029_2189 Rhodobacter sphaeroides ATCC 17029 bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN YP_001044064.1 2317055 R 349101 CDS YP_001044065.1 126462951 4895849 complement(2320133..2321683) 1 NC_009049.1 KEGG: rsp:RSP_0539 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit beta 2321683 4895849 Rsph17029_2190 Rhodobacter sphaeroides ATCC 17029 nitrogenase molybdenum-iron protein subunit beta YP_001044065.1 2320133 R 349101 CDS YP_001044066.1 126462952 4895103 complement(2321754..2323235) 1 NC_009049.1 KEGG: rsp:RSP_0540 nitrogenase iron-molybdenum protein, alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit alpha 2323235 4895103 Rsph17029_2191 Rhodobacter sphaeroides ATCC 17029 nitrogenase molybdenum-iron protein subunit alpha YP_001044066.1 2321754 R 349101 CDS YP_001044067.1 126462953 4897320 complement(2323297..2324172) 1 NC_009049.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 2324172 nifH 4897320 nifH Rhodobacter sphaeroides ATCC 17029 nitrogenase reductase YP_001044067.1 2323297 R 349101 CDS YP_001044068.1 126462954 4895457 complement(2324623..2325453) 1 NC_009049.1 KEGG: rsp:RSP_0542 hypothetical protein; hypothetical protein 2325453 4895457 Rsph17029_2193 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044068.1 2324623 R 349101 CDS YP_001044069.1 126462955 4895224 complement(2325458..2325673) 1 NC_009049.1 PFAM: NifT/FixU family protein; KEGG: rsp:RSP_0543 hypothetical protein; NifT/FixU family protein 2325673 4895224 Rsph17029_2194 Rhodobacter sphaeroides ATCC 17029 NifT/FixU family protein YP_001044069.1 2325458 R 349101 CDS YP_001044070.1 126462956 4895379 complement(2325670..2325954) 1 NC_009049.1 PFAM: NifZ family protein; KEGG: rsp:RSP_0544 probable NifZ; NifZ family protein 2325954 4895379 Rsph17029_2195 Rhodobacter sphaeroides ATCC 17029 NifZ family protein YP_001044070.1 2325670 R 349101 CDS YP_001044071.1 126462957 4895570 complement(2325941..2326708) 1 NC_009049.1 PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: rsp:RSP_0545 hypothetical protein; LRV FeS4 cluster domain-containing protein 2326708 4895570 Rsph17029_2196 Rhodobacter sphaeroides ATCC 17029 LRV FeS4 cluster domain-containing protein YP_001044071.1 2325941 R 349101 CDS YP_001044072.1 126462958 4895691 complement(2326915..2328390) 1 NC_009049.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; Radical SAM domain protein; KEGG: rsp:RSP_0546 NifB family--FeMo cofactor biosynthesis protein; nitrogenase cofactor biosynthesis protein NifB 2328390 4895691 Rsph17029_2197 Rhodobacter sphaeroides ATCC 17029 nitrogenase cofactor biosynthesis protein NifB YP_001044072.1 2326915 R 349101 CDS YP_001044073.1 126462959 4895760 complement(2328638..2330383) 1 NC_009049.1 KEGG: rsp:RSP_0547 NifA transcriptional activator; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; transcriptional regulator NifA 2330383 4895760 Rsph17029_2198 Rhodobacter sphaeroides ATCC 17029 transcriptional regulator NifA YP_001044073.1 2328638 R 349101 CDS YP_001044074.1 126462960 4895968 complement(2330663..2331058) 1 NC_009049.1 PFAM: Rhodanese domain protein; KEGG: rsp:RSP_0548 hypothetical protein; rhodanese domain-containing protein 2331058 4895968 Rsph17029_2199 Rhodobacter sphaeroides ATCC 17029 rhodanese domain-containing protein YP_001044074.1 2330663 R 349101 CDS YP_001044075.1 126462961 4895993 2331371..2332153 1 NC_009049.1 PFAM: Sporulation domain protein; KEGG: rsp:RSP_0549 hypothetical protein; sporulation domain-containing protein 2332153 4895993 Rsph17029_2200 Rhodobacter sphaeroides ATCC 17029 sporulation domain-containing protein YP_001044075.1 2331371 D 349101 CDS YP_001044076.1 126462962 4896193 2332171..2333340 1 NC_009049.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rsp:RSP_0550 putative D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 2333340 4896193 Rsph17029_2201 Rhodobacter sphaeroides ATCC 17029 serine-type D-Ala-D-Ala carboxypeptidase YP_001044076.1 2332171 D 349101 CDS YP_001044077.1 126462963 4896311 2333353..2334006 1 NC_009049.1 PFAM: thymidylate kinase; KEGG: rsp:RSP_0551 putative thymidylate kinase; dTMP kinase 2334006 4896311 Rsph17029_2202 Rhodobacter sphaeroides ATCC 17029 dTMP kinase YP_001044077.1 2333353 D 349101 CDS YP_001044078.1 126462964 4896756 complement(2334192..2334806) 1 NC_009049.1 KEGG: rsp:RSP_6118 hypothetical protein; hypothetical protein 2334806 4896756 Rsph17029_2203 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044078.1 2334192 R 349101 CDS YP_001044079.1 126462965 4896837 2335078..2335419 1 NC_009049.1 PFAM: small multidrug resistance protein; KEGG: rsp:RSP_0552 putative multidrug transporter, SMR family, DMT superfamily; small multidrug resistance protein 2335419 4896837 Rsph17029_2204 Rhodobacter sphaeroides ATCC 17029 small multidrug resistance protein YP_001044079.1 2335078 D 349101 CDS YP_001044080.1 126462966 4897079 complement(2335688..2336713) 1 NC_009049.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2336713 ruvB 4897079 ruvB Rhodobacter sphaeroides ATCC 17029 Holliday junction DNA helicase RuvB YP_001044080.1 2335688 R 349101 CDS YP_001044081.1 126462967 4897202 complement(2336778..2337680) 1 NC_009049.1 putative metalloprotease; heat shock protein HtpX 2337680 4897202 Rsph17029_2206 Rhodobacter sphaeroides ATCC 17029 heat shock protein HtpX YP_001044081.1 2336778 R 349101 CDS YP_001044082.1 126462968 4897718 complement(2337785..2338459) 1 NC_009049.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2338459 ruvA 4897718 ruvA Rhodobacter sphaeroides ATCC 17029 Holliday junction DNA helicase RuvA YP_001044082.1 2337785 R 349101 CDS YP_001044083.1 126462969 4895237 complement(2338456..2338962) 1 NC_009049.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2338962 ruvC 4895237 ruvC Rhodobacter sphaeroides ATCC 17029 Holliday junction resolvase YP_001044083.1 2338456 R 349101 CDS YP_001044084.1 126462970 4895319 2339282..2339494 1 NC_009049.1 PFAM: protein of unknown function DUF1127; KEGG: rsp:RSP_0557 hypothetical protein; hypothetical protein 2339494 4895319 Rsph17029_2209 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044084.1 2339282 D 349101 CDS YP_001044085.1 126462971 4895464 complement(2339846..2340721) 1 NC_009049.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; KEGG: rsp:RSP_0558 possible ribosomal protein L11 methyltransferase; ribosomal L11 methyltransferase 2340721 4895464 Rsph17029_2210 Rhodobacter sphaeroides ATCC 17029 ribosomal L11 methyltransferase YP_001044085.1 2339846 R 349101 CDS YP_001044086.1 126462972 4896742 complement(2340785..2341459) 1 NC_009049.1 KEGG: rsp:RSP_0559 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 2341459 4896742 Rsph17029_2211 Rhodobacter sphaeroides ATCC 17029 peptide methionine sulfoxide reductase YP_001044086.1 2340785 R 349101 CDS YP_001044087.1 126462973 4896782 complement(2341679..2343871) 1 NC_009049.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 2343871 4896782 Rsph17029_2212 Rhodobacter sphaeroides ATCC 17029 primosome assembly protein PriA YP_001044087.1 2341679 R 349101 CDS YP_001044088.1 126462974 4896151 2343966..2344625 1 NC_009049.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 2344625 4896151 Rsph17029_2213 Rhodobacter sphaeroides ATCC 17029 putative translaldolase YP_001044088.1 2343966 D 349101 CDS YP_001044089.1 126462975 4896001 2344648..2345337 1 NC_009049.1 KEGG: rsp:RSP_0562 hypothetical protein; hypothetical protein 2345337 4896001 Rsph17029_2214 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044089.1 2344648 D 349101 CDS YP_001044090.1 126462976 4896604 2345334..2346254 1 NC_009049.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2346254 xerC 4896604 xerC Rhodobacter sphaeroides ATCC 17029 site-specific tyrosine recombinase XerC YP_001044090.1 2345334 D 349101 CDS YP_001044091.1 126462977 4895990 2346363..2347082 1 NC_009049.1 KEGG: rsp:RSP_0564 hypothetical protein; hypothetical protein 2347082 4895990 Rsph17029_2216 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044091.1 2346363 D 349101 CDS YP_001044092.1 126462978 4896348 2347178..2347894 1 NC_009049.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_0565 putative phosphatidylcholine synthase; phosphatidylcholine synthase 2347894 4896348 Rsph17029_2217 Rhodobacter sphaeroides ATCC 17029 phosphatidylcholine synthase YP_001044092.1 2347178 D 349101 CDS YP_001044093.1 126462979 4896067 complement(2347902..2348738) 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0566 possible transporter, DMT superfamily; hypothetical protein 2348738 4896067 Rsph17029_2218 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044093.1 2347902 R 349101 CDS YP_001044094.1 126462980 4896657 complement(2348802..2349245) 1 NC_009049.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rsp:RSP_0567 probable methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2349245 4896657 Rsph17029_2219 Rhodobacter sphaeroides ATCC 17029 methylated-DNA--protein-cysteine methyltransferase YP_001044094.1 2348802 R 349101 CDS YP_001044095.1 126462981 4895455 complement(2349242..2349487) 1 NC_009049.1 KEGG: rsp:RSP_6119 hypothetical protein; hypothetical protein 2349487 4895455 Rsph17029_2220 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044095.1 2349242 R 349101 CDS YP_001044096.1 126462982 4896881 complement(2349471..2352425) 1 NC_009049.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2352425 ileS 4896881 ileS Rhodobacter sphaeroides ATCC 17029 isoleucyl-tRNA synthetase YP_001044096.1 2349471 R 349101 CDS YP_001044097.1 126462983 4897121 complement(2352621..2353676) 1 NC_009049.1 PFAM: conserved hypothetical protein 1620; KEGG: rsp:RSP_0569 hypothetical protein; hypothetical protein 2353676 4897121 Rsph17029_2222 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044097.1 2352621 R 349101 CDS YP_001044098.1 126462984 4897123 complement(2353777..2355207) 1 NC_009049.1 PFAM: protein of unknown function DUF463, YcjX family protein; KEGG: rsp:RSP_0570 hypothetical protein; hypothetical protein 2355207 4897123 Rsph17029_2223 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044098.1 2353777 R 349101 CDS YP_001044099.1 126462985 4897572 2355434..2356201 1 NC_009049.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2356201 truA 4897572 truA Rhodobacter sphaeroides ATCC 17029 tRNA pseudouridine synthase A YP_001044099.1 2355434 D 349101 CDS YP_001044100.1 126462986 4896431 complement(2356414..2358501) 1 NC_009049.1 KEGG: rsp:RSP_0572 putative exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2358501 4896431 Rsph17029_2225 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit epsilon YP_001044100.1 2356414 R 349101 CDS YP_001044101.1 126462987 4897493 complement(2358505..2358894) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_0573 response regulator receiver protein; response regulator receiver protein 2358894 4897493 Rsph17029_2226 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001044101.1 2358505 R 349101 CDS YP_001044102.1 126462988 4897658 complement(2358896..2359417) 1 NC_009049.1 KEGG: rsp:RSP_0574 hypothetical protein; hypothetical protein 2359417 4897658 Rsph17029_2227 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044102.1 2358896 R 349101 CDS YP_001044103.1 126462989 4897447 complement(2359428..2361248) 1 NC_009049.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: rsp:RSP_0575 predicted signal transduction protein containing cyclic nucleotide-binding and CBS domains; cyclic nucleotide-binding protein 2361248 4897447 Rsph17029_2228 Rhodobacter sphaeroides ATCC 17029 cyclic nucleotide-binding protein YP_001044103.1 2359428 R 349101 CDS YP_001044104.1 126462990 4895649 complement(2361312..2363129) 1 NC_009049.1 PFAM: Na+/solute symporter; KEGG: rsp:RSP_0576 Na+/solute symporter; Na+/solute symporter 2363129 4895649 Rsph17029_2229 Rhodobacter sphaeroides ATCC 17029 Na+/solute symporter YP_001044104.1 2361312 R 349101 CDS YP_001044105.1 126462991 4898085 complement(2363145..2363426) 1 NC_009049.1 KEGG: rsp:RSP_0577 hypothetical protein; hypothetical protein 2363426 4898085 Rsph17029_2230 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044105.1 2363145 R 349101 CDS YP_001044106.1 126462992 4896511 complement(2363493..2364182) 1 NC_009049.1 TIGRFAM: adenylate kinases; PFAM: adenylate kinase; adenylate kinase, lid domain protein; KEGG: rsp:RSP_0578 adenylate kinase; adenylate kinase 2364182 4896511 Rsph17029_2231 Rhodobacter sphaeroides ATCC 17029 adenylate kinase YP_001044106.1 2363493 R 349101 CDS YP_001044107.1 126462993 4897712 complement(2364186..2366147) 1 NC_009049.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_0579 acetyl-coenzyme A synthetase; acetate--CoA ligase 2366147 4897712 Rsph17029_2232 Rhodobacter sphaeroides ATCC 17029 acetate--CoA ligase YP_001044107.1 2364186 R 349101 CDS YP_001044108.1 126462994 4897832 complement(2366500..2368137) 1 NC_009049.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rsp:RSP_0580 putative sulfate transporter, SulP family; sulfate transporter 2368137 4897832 Rsph17029_2233 Rhodobacter sphaeroides ATCC 17029 sulfate transporter YP_001044108.1 2366500 R 349101 CDS YP_001044109.1 126462995 4897847 2368210..2368704 1 NC_009049.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rsp:RSP_0581 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2368704 4897847 Rsph17029_2234 Rhodobacter sphaeroides ATCC 17029 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001044109.1 2368210 D 349101 CDS YP_001044110.1 126462996 4897801 2368855..2370312 1 NC_009049.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: rsp:RSP_0582 possible penicillin binding protein; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2370312 4897801 Rsph17029_2235 Rhodobacter sphaeroides ATCC 17029 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001044110.1 2368855 D 349101 CDS YP_001044111.1 126462997 4897869 complement(2370472..2370894) 1 NC_009049.1 KEGG: rsp:RSP_0583 hypothetical protein; hypothetical protein 2370894 4897869 Rsph17029_2236 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044111.1 2370472 R 349101 CDS YP_001044112.1 126462998 4897948 2371153..2372733 1 NC_009049.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 2372733 lysK 4897948 lysK Rhodobacter sphaeroides ATCC 17029 lysyl-tRNA synthetase YP_001044112.1 2371153 D 349101 CDS YP_001044113.1 126462999 4897717 2373192..2373614 1 NC_009049.1 PFAM: OsmC family protein; KEGG: rsp:RSP_0585 osmotically inducible protein OsmC; OsmC family protein 2373614 4897717 Rsph17029_2238 Rhodobacter sphaeroides ATCC 17029 OsmC family protein YP_001044113.1 2373192 D 349101 CDS YP_001044114.1 126463000 4896577 complement(2373942..2374520) 1 NC_009049.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 2374520 nadD 4896577 nadD Rhodobacter sphaeroides ATCC 17029 nicotinic acid mononucleotide adenylyltransferase YP_001044114.1 2373942 R 349101 CDS YP_001044115.1 126463001 4897298 2374701..2376356 1 NC_009049.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 2376356 4897298 Rsph17029_2240 Rhodobacter sphaeroides ATCC 17029 putative ABC transporter ATP-binding protein YP_001044115.1 2374701 D 349101 CDS YP_001044116.1 126463002 4896434 2376353..2376712 1 NC_009049.1 KEGG: rsp:RSP_0588 hypothetical protein; hypothetical protein 2376712 4896434 Rsph17029_2241 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044116.1 2376353 D 349101 CDS YP_001044117.1 126463003 4896328 complement(2376842..2377045) 1 NC_009049.1 KEGG: rsp:RSP_0589 hypothetical protein; hypothetical protein 2377045 4896328 Rsph17029_2242 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044117.1 2376842 R 349101 CDS YP_001044118.1 126463004 4897416 2377190..2377342 1 NC_009049.1 KEGG: rsp:RSP_6120 hypothetical protein; hypothetical protein 2377342 4897416 Rsph17029_2243 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044118.1 2377190 D 349101 CDS YP_001044119.1 126463005 4896809 complement(2377433..2377723) 1 NC_009049.1 KEGG: rsp:RSP_0590 hypothetical protein; hypothetical protein 2377723 4896809 Rsph17029_2244 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044119.1 2377433 R 349101 CDS YP_001044120.1 126463006 4896255 2377974..2378180 1 NC_009049.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_0591 cold-shock protein; cold-shock DNA-binding domain-containing protein 2378180 4896255 Rsph17029_2245 Rhodobacter sphaeroides ATCC 17029 cold-shock DNA-binding domain-containing protein YP_001044120.1 2377974 D 349101 CDS YP_001044121.1 126463007 4897525 2378304..2379242 1 NC_009049.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rsp:RSP_0592 putative lipase/esterase; alpha/beta hydrolase domain-containing protein 2379242 4897525 Rsph17029_2246 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase domain-containing protein YP_001044121.1 2378304 D 349101 CDS YP_001044122.1 126463008 4897353 2379336..2380841 1 NC_009049.1 PFAM: sulfatase; KEGG: rsp:RSP_0594 putative choline sulfatase; sulfatase 2380841 4897353 Rsph17029_2247 Rhodobacter sphaeroides ATCC 17029 sulfatase YP_001044122.1 2379336 D 349101 CDS YP_001044123.1 126463009 4897304 complement(2380924..2381439) 1 NC_009049.1 PFAM: Lipocalin family protein; KEGG: rsp:RSP_0595 putative outer membrane lipoprotein Blc; lipocalin family protein 2381439 4897304 Rsph17029_2248 Rhodobacter sphaeroides ATCC 17029 lipocalin family protein YP_001044123.1 2380924 R 349101 CDS YP_001044124.1 126463010 4896399 complement(2381523..2383541) 1 NC_009049.1 PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: rsp:RSP_0596 putative peptidyl-dipeptidase; peptidyl-dipeptidase Dcp 2383541 4896399 Rsph17029_2249 Rhodobacter sphaeroides ATCC 17029 peptidyl-dipeptidase Dcp YP_001044124.1 2381523 R 349101 CDS YP_001044125.1 126463011 4896738 complement(2383628..2384674) 1 NC_009049.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rsp:RSP_0597 probable molybdopterin biosynthesis protein; UBA/THIF-type NAD/FAD binding protein 2384674 4896738 Rsph17029_2250 Rhodobacter sphaeroides ATCC 17029 UBA/THIF-type NAD/FAD binding protein YP_001044125.1 2383628 R 349101 CDS YP_001044126.1 126463012 4895062 complement(2384674..2385141) 1 NC_009049.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2385141 dut 4895062 dut Rhodobacter sphaeroides ATCC 17029 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001044126.1 2384674 R 349101 CDS YP_001044127.1 126463013 4896453 complement(2385247..2386437) 1 NC_009049.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2386437 4896453 Rsph17029_2252 Rhodobacter sphaeroides ATCC 17029 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001044127.1 2385247 R 349101 CDS YP_001044128.1 126463014 4897659 complement(2386500..2387327) 1 NC_009049.1 KEGG: rsp:RSP_0600 hypothetical protein; hypothetical protein 2387327 4897659 Rsph17029_2253 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044128.1 2386500 R 349101 CDS YP_001044129.1 126463015 4896822 complement(2387324..2388202) 1 NC_009049.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 2388202 rpoH2 4896822 rpoH2 Rhodobacter sphaeroides ATCC 17029 RNA polymerase factor sigma-32 YP_001044129.1 2387324 R 349101 CDS YP_001044130.1 126463016 4897165 2388257..2388811 1 NC_009049.1 PFAM: cobalbumin biosynthesis enzyme; KEGG: rsp:RSP_0602 possible adenosyl cobinamide kinase/cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase 2388811 4897165 Rsph17029_2255 Rhodobacter sphaeroides ATCC 17029 adenosylcobinamide kinase YP_001044130.1 2388257 D 349101 CDS YP_001044131.1 126463017 4897333 2388808..2389386 1 NC_009049.1 PFAM: Phosphoglycerate mutase; KEGG: rsp:RSP_0603 hypothetical protein; phosphoglycerate mutase 2389386 4897333 Rsph17029_2256 Rhodobacter sphaeroides ATCC 17029 phosphoglycerate mutase YP_001044131.1 2388808 D 349101 CDS YP_001044132.1 126463018 4897407 complement(2389681..2390772) 1 NC_009049.1 PFAM: phage integrase family protein; KEGG: mag:amb3645 integrase; phage integrase family protein 2390772 4897407 Rsph17029_2257 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001044132.1 2389681 R 349101 CDS YP_001044133.1 126463019 4896909 complement(2390917..2392740) 1 NC_009049.1 PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_2079 hypothetical protein; nuclease 2392740 4896909 Rsph17029_2258 Rhodobacter sphaeroides ATCC 17029 nuclease YP_001044133.1 2390917 R 349101 CDS YP_001044134.1 126463020 4897207 complement(2392864..2393130) 1 NC_009049.1 KEGG: rsp:RSP_3610 hypothetical protein; hypothetical protein 2393130 4897207 Rsph17029_2259 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044134.1 2392864 R 349101 CDS YP_001044135.1 126463021 4896300 2393358..2393474 1 NC_009049.1 KEGG: rsp:RSP_1651 hypothetical protein; hypothetical protein 2393474 4896300 Rsph17029_2260 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044135.1 2393358 D 349101 CDS YP_001044136.1 126463022 4897231 2393461..2393856 1 NC_009049.1 KEGG: rsp:RSP_1650 hypothetical protein; hypothetical protein 2393856 4897231 Rsph17029_2261 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044136.1 2393461 D 349101 CDS YP_001044137.1 126463023 4897706 2393978..2395024 1 NC_009049.1 PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 2395024 4897706 Rsph17029_2262 Rhodobacter sphaeroides ATCC 17029 integrase catalytic subunit YP_001044137.1 2393978 D 349101 CDS YP_001044138.1 126463024 4896821 2395075..2396022 1 NC_009049.1 KEGG: bur:Bcep18194_B1501 alpha/beta hydrolase; alpha/beta hydrolase 2396022 4896821 Rsph17029_2263 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001044138.1 2395075 D 349101 CDS YP_001044139.1 126463025 4897356 2397201..2397794 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: rsp:RSP_0615 putative oxidoreductase; alcohol dehydrogenase 2397794 4897356 Rsph17029_2265 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001044139.1 2397201 D 349101 CDS YP_001044140.1 126463026 4897368 complement(2398566..2402243) 1 NC_009049.1 TIGRFAM: pentatricopeptide repeat containing protein; KEGG: osa:4331201 Os02g0824000; pentapeptide repeat-containing protein 2402243 4897368 Rsph17029_2266 Rhodobacter sphaeroides ATCC 17029 pentapeptide repeat-containing protein YP_001044140.1 2398566 R 349101 CDS YP_001044141.1 126463027 4895939 2402962..2403594 1 NC_009049.1 PFAM: phage integrase family protein; KEGG: sit:TM1040_3118 phage integrase; phage integrase family protein 2403594 4895939 Rsph17029_2267 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001044141.1 2402962 D 349101 CDS YP_001044142.1 126463028 4895230 2403681..2404286 1 NC_009049.1 PFAM: helix-turn-helix domain protein; plasmid stabilization system; KEGG: sme:SMc00089 hypothetical protein; XRE family transcriptional regulator 2404286 4895230 Rsph17029_2268 Rhodobacter sphaeroides ATCC 17029 XRE family transcriptional regulator YP_001044142.1 2403681 D 349101 CDS YP_001044143.1 126463029 4895244 2404563..2405036 1 NC_009049.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_0606 putative redox protein; alkylhydroperoxidase 2405036 4895244 Rsph17029_2269 Rhodobacter sphaeroides ATCC 17029 alkylhydroperoxidase YP_001044143.1 2404563 D 349101 CDS YP_001044144.1 126463030 4896936 2405026..2405886 1 NC_009049.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 2405886 4896936 Rsph17029_2270 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma factor SigJ YP_001044144.1 2405026 D 349101 CDS YP_001044145.1 126463031 4896079 complement(2406211..2406759) 1 NC_009049.1 KEGG: sma:SAV1564 putative ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase and permease components-like 2406759 4896079 Rsph17029_2271 Rhodobacter sphaeroides ATCC 17029 ABC-type multidrug transport system ATPase and permease components-like YP_001044145.1 2406211 R 349101 CDS YP_001044146.1 126463032 4895273 complement(2406765..2407847) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpe:RPE_3323 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2407847 4895273 Rsph17029_2272 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001044146.1 2406765 R 349101 CDS YP_001044147.1 126463033 4896175 complement(2407837..2408301) 1 NC_009049.1 PFAM: transcriptional regulator domain protein; KEGG: rpe:RPE_3324 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2408301 4896175 Rsph17029_2273 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001044147.1 2407837 R 349101 CDS YP_001044148.1 126463034 4895262 2408365..2408754 1 NC_009049.1 KEGG: rsp:RSP_0621 possible DNA helicase; putative DNA helicase 2408754 4895262 Rsph17029_2274 Rhodobacter sphaeroides ATCC 17029 putative DNA helicase YP_001044148.1 2408365 D 349101 CDS YP_001044149.1 126463035 4897664 complement(2408955..2409137) 1 NC_009049.1 PFAM: protein of unknown function DUF329; KEGG: rsp:RSP_0623 hypothetical protein; hypothetical protein 2409137 4897664 Rsph17029_2275 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044149.1 2408955 R 349101 CDS YP_001044150.1 126463036 4895321 complement(2409134..2410177) 1 NC_009049.1 KEGG: rsp:RSP_0624 ribonuclease; ribonuclease 2410177 4895321 Rsph17029_2276 Rhodobacter sphaeroides ATCC 17029 ribonuclease YP_001044150.1 2409134 R 349101 CDS YP_001044151.1 126463037 4895297 complement(2410174..2410752) 1 NC_009049.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rsp:RSP_0625 putative Maf-like protein; maf protein 2410752 4895297 Rsph17029_2277 Rhodobacter sphaeroides ATCC 17029 maf protein YP_001044151.1 2410174 R 349101 CDS YP_001044152.1 126463038 4897155 complement(2410753..2410971) 1 NC_009049.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2410971 infA 4897155 infA Rhodobacter sphaeroides ATCC 17029 translation initiation factor IF-1 YP_001044152.1 2410753 R 349101 CDS YP_001044153.1 126463039 4895318 complement(2411146..2412021) 1 NC_009049.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_0627 putative amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2412021 4895318 Rsph17029_2279 Rhodobacter sphaeroides ATCC 17029 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001044153.1 2411146 R 349101 CDS YP_001044154.1 126463040 4895332 complement(2412041..2412628) 1 NC_009049.1 KEGG: rsp:RSP_0628 hypothetical protein; hypothetical protein 2412628 4895332 Rsph17029_2280 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044154.1 2412041 R 349101 CDS YP_001044155.1 126463041 4895536 complement(2412625..2413029) 1 NC_009049.1 PFAM: protein of unknown function DUF1486; KEGG: rsp:RSP_0629 hypothetical protein; hypothetical protein 2413029 4895536 Rsph17029_2281 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044155.1 2412625 R 349101 CDS YP_001044156.1 126463042 4895576 complement(2413013..2413498) 1 NC_009049.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rsp:RSP_0630 hypothetical protein; protein tyrosine phosphatase 2413498 4895576 Rsph17029_2282 Rhodobacter sphaeroides ATCC 17029 protein tyrosine phosphatase YP_001044156.1 2413013 R 349101 CDS YP_001044157.1 126463043 4896827 complement(2413501..2413977) 1 NC_009049.1 PFAM: Uncharacterised conserved protein UCP032146; KEGG: rsp:RSP_0631 hypothetical protein; hypothetical protein 2413977 4896827 Rsph17029_2283 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044157.1 2413501 R 349101 CDS YP_001044158.1 126463044 4895413 complement(2413981..2415285) 1 NC_009049.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2415285 hisD 4895413 hisD Rhodobacter sphaeroides ATCC 17029 histidinol dehydrogenase YP_001044158.1 2413981 R 349101 CDS YP_001044159.1 126463045 4895399 complement(2415507..2415986) 1 NC_009049.1 KEGG: rsp:RSP_6122 hypothetical protein; hypothetical protein 2415986 4895399 Rsph17029_2285 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044159.1 2415507 R 349101 CDS YP_001044160.1 126463046 4897904 complement(2415986..2417254) 1 NC_009049.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2417254 4897904 Rsph17029_2286 Rhodobacter sphaeroides ATCC 17029 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001044160.1 2415986 R 349101 CDS YP_001044161.1 126463047 4897782 complement(2418057..2419364) 1 NC_009049.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_0634 TRAP-T family transporter, DctM (12 TMs) subunit; TRAP dicarboxylate transporter subunit DctM 2419364 4897782 Rsph17029_2287 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001044161.1 2418057 R 349101 CDS YP_001044162.1 126463048 4897715 complement(2419374..2419892) 1 NC_009049.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0635 TRAP-T family transporter, DctQ (4 TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ 2419892 4897715 Rsph17029_2288 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001044162.1 2419374 R 349101 CDS YP_001044163.1 126463049 4895486 complement(2419951..2421075) 1 NC_009049.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0636 TRAP-T family transporter, DctP (periplasmic binding) subunit; TRAP dicarboxylate transporter- DctP subunit 2421075 4895486 Rsph17029_2289 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001044163.1 2419951 R 349101 CDS YP_001044164.1 126463050 4895489 complement(2421162..2421887) 1 NC_009049.1 PFAM: protein of unknown function DUF861, cupin_3; KEGG: rsp:RSP_0637 hypothetical protein; hypothetical protein 2421887 4895489 Rsph17029_2290 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044164.1 2421162 R 349101 CDS YP_001044165.1 126463051 4895520 complement(2421884..2423176) 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0638 putative FAD dependent oxidoreductase protein; FAD dependent oxidoreductase 2423176 4895520 Rsph17029_2291 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001044165.1 2421884 R 349101 CDS YP_001044166.1 126463052 4895552 complement(2423178..2424854) 1 NC_009049.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rsp:RSP_0639 putative N-methylhydantoinase B; 5-oxoprolinase 2424854 4895552 Rsph17029_2292 Rhodobacter sphaeroides ATCC 17029 5-oxoprolinase YP_001044166.1 2423178 R 349101 CDS YP_001044167.1 126463053 4897721 complement(2424858..2426876) 1 NC_009049.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rsp:RSP_0640 putative N-methylhydantoinase A; 5-oxoprolinase 2426876 4897721 Rsph17029_2293 Rhodobacter sphaeroides ATCC 17029 5-oxoprolinase YP_001044167.1 2424858 R 349101 CDS YP_001044168.1 126463054 4895598 2427116..2427751 1 NC_009049.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_0641 transcriptional regulator, XRE family; XRE family transcriptional regulator 2427751 4895598 Rsph17029_2294 Rhodobacter sphaeroides ATCC 17029 XRE family transcriptional regulator YP_001044168.1 2427116 D 349101 CDS YP_001044169.1 126463055 4897918 2427758..2428702 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0642 possible transporter, RhaT family, DMT superfamily; hypothetical protein 2428702 4897918 Rsph17029_2295 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044169.1 2427758 D 349101 CDS YP_001044170.1 126463056 4895816 2429232..2430857 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; MASE1 domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_0643 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase 2430857 4895816 Rsph17029_2296 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase YP_001044170.1 2429232 D 349101 CDS YP_001044171.1 126463057 4895670 complement(2430861..2431577) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0644 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2431577 4895670 Rsph17029_2297 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001044171.1 2430861 R 349101 CDS YP_001044172.1 126463058 4895471 complement(2431574..2432254) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0645 ABC transporter, ATPase subunit; ABC transporter 2432254 4895471 Rsph17029_2298 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044172.1 2431574 R 349101 CDS YP_001044173.1 126463059 4895983 complement(2432254..2433189) 1 NC_009049.1 KEGG: rsp:RSP_0646 ABC transporter, substrate-binding protein; ABC transporter substrate-binding protein 2433189 4895983 Rsph17029_2299 Rhodobacter sphaeroides ATCC 17029 ABC transporter substrate-binding protein YP_001044173.1 2432254 R 349101 CDS YP_001044174.1 126463060 4895804 complement(2433186..2433989) 1 NC_009049.1 KEGG: rsp:RSP_0647 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 2433989 4895804 Rsph17029_2300 Rhodobacter sphaeroides ATCC 17029 phosphomethylpyrimidine kinase YP_001044174.1 2433186 R 349101 CDS YP_001044175.1 126463061 4896628 complement(2433986..2434597) 1 NC_009049.1 KEGG: rsp:RSP_0648 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2434597 4896628 Rsph17029_2301 Rhodobacter sphaeroides ATCC 17029 thiamine-phosphate pyrophosphorylase YP_001044175.1 2433986 R 349101 CDS YP_001044176.1 126463062 4895846 complement(2434594..2435382) 1 NC_009049.1 PFAM: hydroxyethylthiazole kinase; KEGG: rsp:RSP_0649 putative hydoxyethylthiazole kinase; hydroxyethylthiazole kinase 2435382 4895846 Rsph17029_2302 Rhodobacter sphaeroides ATCC 17029 hydroxyethylthiazole kinase YP_001044176.1 2434594 R 349101 CDS YP_001044177.1 126463063 4896353 complement(2435760..2436212) 1 NC_009049.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_0650 probable transglycosylase; lytic transglycosylase, catalytic 2436212 4896353 Rsph17029_2303 Rhodobacter sphaeroides ATCC 17029 lytic transglycosylase, catalytic YP_001044177.1 2435760 R 349101 CDS YP_001044178.1 126463064 4895903 complement(2436209..2437003) 1 NC_009049.1 PFAM: inositol monophosphatase; KEGG: rsp:RSP_0651 putative inositol monophosphatase protein; inositol-phosphate phosphatase 2437003 4895903 Rsph17029_2304 Rhodobacter sphaeroides ATCC 17029 inositol-phosphate phosphatase YP_001044178.1 2436209 R 349101 CDS YP_001044179.1 126463065 4895737 complement(2437014..2438000) 1 NC_009049.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0652 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2438000 4895737 Rsph17029_2305 Rhodobacter sphaeroides ATCC 17029 UDP-glucose 4-epimerase YP_001044179.1 2437014 R 349101 CDS YP_001044180.1 126463066 4895951 complement(2438010..2439314) 1 NC_009049.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: rsp:RSP_0653 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 2439314 4895951 Rsph17029_2306 Rhodobacter sphaeroides ATCC 17029 UDP-glucose 6-dehydrogenase YP_001044180.1 2438010 R 349101 CDS YP_001044181.1 126463067 4895940 complement(2439382..2440293) 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0654 possible transporter, DMT superfamily; hypothetical protein 2440293 4895940 Rsph17029_2307 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044181.1 2439382 R 349101 CDS YP_001044182.1 126463068 4897940 complement(2440470..2441216) 1 NC_009049.1 PFAM: protein of unknown function DUF28; KEGG: rsp:RSP_0655 hypothetical protein; hypothetical protein 2441216 4897940 Rsph17029_2308 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044182.1 2440470 R 349101 CDS YP_001044183.1 126463069 4895954 complement(2441311..2443089) 1 NC_009049.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: rsp:RSP_0656 probable sodium/sulphate symporter; TrkA domain-containing protein 2443089 4895954 Rsph17029_2309 Rhodobacter sphaeroides ATCC 17029 TrkA domain-containing protein YP_001044183.1 2441311 R 349101 CDS YP_001044184.1 126463070 4895969 complement(2443202..2444047) 1 NC_009049.1 PFAM: metallophosphoesterase; KEGG: rsp:RSP_0657 hypothetical protein; metallophosphoesterase 2444047 4895969 Rsph17029_2310 Rhodobacter sphaeroides ATCC 17029 metallophosphoesterase YP_001044184.1 2443202 R 349101 CDS YP_001044185.1 126463071 4895977 2444096..2446495 1 NC_009049.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_0658 probable ATP-dependent helicase; DEAD/DEAH box helicase 2446495 4895977 Rsph17029_2311 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001044185.1 2444096 D 349101 CDS YP_001044186.1 126463072 4895962 2446601..2447287 1 NC_009049.1 PFAM: metallophosphoesterase; KEGG: rsp:RSP_0659 putative metallo-phosphoesterase; metallophosphoesterase 2447287 4895962 Rsph17029_2312 Rhodobacter sphaeroides ATCC 17029 metallophosphoesterase YP_001044186.1 2446601 D 349101 CDS YP_001044187.1 126463073 4897413 complement(2447251..2447970) 1 NC_009049.1 PFAM: LytTr DNA-binding region; KEGG: rsp:RSP_0660 hypothetical protein; response regulator receiver protein 2447970 4897413 Rsph17029_2313 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001044187.1 2447251 R 349101 CDS YP_001044188.1 126463074 4896056 complement(2448085..2448975) 1 NC_009049.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2448975 4896056 Rsph17029_2314 Rhodobacter sphaeroides ATCC 17029 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001044188.1 2448085 R 349101 CDS YP_001044189.1 126463075 4897327 complement(2448972..2449289) 1 NC_009049.1 PFAM: Chorismate mutase; KEGG: rsp:RSP_0662 putative chorismate mutase; chorismate mutase 2449289 4897327 Rsph17029_2315 Rhodobacter sphaeroides ATCC 17029 chorismate mutase YP_001044189.1 2448972 R 349101 CDS YP_001044190.1 126463076 4895996 complement(2449364..2451037) 1 NC_009049.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 2451037 4895996 Rsph17029_2316 Rhodobacter sphaeroides ATCC 17029 formate--tetrahydrofolate ligase YP_001044190.1 2449364 R 349101 CDS YP_001044191.1 126463077 4897950 complement(2451118..2451810) 1 NC_009049.1 KEGG: rsp:RSP_0664 hypothetical protein; hypothetical protein 2451810 4897950 Rsph17029_2317 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044191.1 2451118 R 349101 CDS YP_001044192.1 126463078 4895581 complement(2452315..2454216) 1 NC_009049.1 KEGG: rsp:RSP_0665 FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 2454216 4895581 Rsph17029_2318 Rhodobacter sphaeroides ATCC 17029 ATP-dependent metalloprotease FtsH YP_001044192.1 2452315 R 349101 CDS YP_001044193.1 126463079 4897053 complement(2454295..2455533) 1 NC_009049.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: ExsB family protein; PP-loop domain protein; KEGG: rsp:RSP_0666 probable cell cycle protein; tRNA(Ile)-lysidine synthetase 2455533 4897053 Rsph17029_2319 Rhodobacter sphaeroides ATCC 17029 tRNA(Ile)-lysidine synthetase YP_001044193.1 2454295 R 349101 CDS YP_001044194.1 126463080 4896145 complement(2455533..2456357) 1 NC_009049.1 KEGG: rsp:RSP_0667 hypothetical protein; hypothetical protein 2456357 4896145 Rsph17029_2320 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044194.1 2455533 R 349101 CDS YP_001044195.1 126463081 4897874 complement(2456362..2456910) 1 NC_009049.1 TIGRFAM: OmpA domain protein; PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_0668 OmpA/MotB family protein; OmpA domain-containing protein 2456910 4897874 Rsph17029_2321 Rhodobacter sphaeroides ATCC 17029 OmpA domain-containing protein YP_001044195.1 2456362 R 349101 CDS YP_001044196.1 126463082 4897505 complement(2456995..2458329) 1 NC_009049.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 2458329 tolB 4897505 tolB Rhodobacter sphaeroides ATCC 17029 translocation protein TolB YP_001044196.1 2456995 R 349101 CDS YP_001044197.1 126463083 4896239 complement(2458399..2459643) 1 NC_009049.1 KEGG: rsp:RSP_0670 possible TolA protein; hypothetical protein 2459643 4896239 Rsph17029_2323 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044197.1 2458399 R 349101 CDS YP_001044198.1 126463084 4895651 complement(2459654..2460124) 1 NC_009049.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rsp:RSP_0671 ExbD/TolR family protein; biopolymer transport protein ExbD/TolR 2460124 4895651 Rsph17029_2324 Rhodobacter sphaeroides ATCC 17029 biopolymer transport protein ExbD/TolR YP_001044198.1 2459654 R 349101 CDS YP_001044199.1 126463085 4896252 complement(2460128..2460826) 1 NC_009049.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rsp:RSP_0672 biopolymer transport protein, TolQ; MotA/TolQ/ExbB proton channel 2460826 4896252 Rsph17029_2325 Rhodobacter sphaeroides ATCC 17029 MotA/TolQ/ExbB proton channel YP_001044199.1 2460128 R 349101 CDS YP_001044200.1 126463086 4896291 complement(2460953..2461351) 1 NC_009049.1 TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_0673 putative thioesterase; 4-hydroxybenzoyl-CoA thioesterase 2461351 4896291 Rsph17029_2326 Rhodobacter sphaeroides ATCC 17029 4-hydroxybenzoyl-CoA thioesterase YP_001044200.1 2460953 R 349101 CDS YP_001044201.1 126463087 4897767 2461619..2461912 1 NC_009049.1 KEGG: rsp:RSP_6124 hypothetical protein; hypothetical protein 2461912 4897767 Rsph17029_2327 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044201.1 2461619 D 349101 CDS YP_001044202.1 126463088 4897361 2462323..2463435 1 NC_009049.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2463435 4897361 Rsph17029_2328 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit delta' YP_001044202.1 2462323 D 349101 CDS YP_001044203.1 126463089 4896334 2463447..2464244 1 NC_009049.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rsp:RSP_0675 putative TatD-related deoxyribonuclease; TatD family hydrolase 2464244 4896334 Rsph17029_2329 Rhodobacter sphaeroides ATCC 17029 TatD family hydrolase YP_001044203.1 2463447 D 349101 CDS YP_001044204.1 126463090 4896325 2464244..2465041 1 NC_009049.1 KEGG: rsp:RSP_0676 PhnP-like protein; PhnP-like protein 2465041 4896325 Rsph17029_2330 Rhodobacter sphaeroides ATCC 17029 PhnP-like protein YP_001044204.1 2464244 D 349101 CDS YP_001044205.1 126463091 4896323 2465038..2465976 1 NC_009049.1 PFAM: Auxin Efflux Carrier; KEGG: rsp:RSP_0677 putative malonate transporter, MdcF, AEC family; auxin efflux carrier 2465976 4896323 Rsph17029_2331 Rhodobacter sphaeroides ATCC 17029 auxin efflux carrier YP_001044205.1 2465038 D 349101 CDS YP_001044206.1 126463092 4896878 complement(2465961..2468708) 1 NC_009049.1 KEGG: rsp:RSP_0678 hypothetical protein; hypothetical protein 2468708 4896878 Rsph17029_2332 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044206.1 2465961 R 349101 CDS YP_001044207.1 126463093 4896406 complement(2469139..2469894) 1 NC_009049.1 KEGG: rsp:RSP_6125 hypothetical protein; Mn2+-dependent serine/threonine protein kinase 2469894 4896406 Rsph17029_2333 Rhodobacter sphaeroides ATCC 17029 Mn2+-dependent serine/threonine protein kinase YP_001044207.1 2469139 R 349101 CDS YP_001044208.1 126463094 4896430 complement(2470072..2471040) 1 NC_009049.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2471040 hemC 4896430 hemC Rhodobacter sphaeroides ATCC 17029 porphobilinogen deaminase YP_001044208.1 2470072 R 349101 CDS YP_001044209.1 126463095 4896506 2471118..2472149 1 NC_009049.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2472149 hemE 4896506 hemE Rhodobacter sphaeroides ATCC 17029 uroporphyrinogen decarboxylase YP_001044209.1 2471118 D 349101 CDS YP_001044210.1 126463096 4895883 2472249..2472875 1 NC_009049.1 KEGG: rsp:RSP_0681 hypothetical protein; hypothetical protein 2472875 4895883 Rsph17029_2336 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044210.1 2472249 D 349101 CDS YP_001044211.1 126463097 4896938 complement(2473016..2473891) 1 NC_009049.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2473891 4896938 Rsph17029_2337 Rhodobacter sphaeroides ATCC 17029 coproporphyrinogen III oxidase YP_001044211.1 2473016 R 349101 CDS YP_001044212.1 126463098 4896680 2474008..2474421 1 NC_009049.1 KEGG: rsp:RSP_0683 hypothetical protein; hypothetical protein 2474421 4896680 Rsph17029_2338 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044212.1 2474008 D 349101 CDS YP_001044213.1 126463099 4896700 complement(2474440..2475249) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0684 possible oxidoreductase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2475249 4896700 Rsph17029_2339 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001044213.1 2474440 R 349101 CDS YP_001044214.1 126463100 4896698 complement(2475262..2476263) 1 NC_009049.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0685 possible ribosomal RNA small subunit methyltransferase C RsmC; methyltransferase small 2476263 4896698 Rsph17029_2340 Rhodobacter sphaeroides ATCC 17029 methyltransferase small YP_001044214.1 2475262 R 349101 CDS YP_001044215.1 126463101 4896760 complement(2476280..2476600) 1 NC_009049.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rsp:RSP_0686 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2476600 4896760 Rsph17029_2341 Rhodobacter sphaeroides ATCC 17029 ATP-dependent Clp protease adaptor protein ClpS YP_001044215.1 2476280 R 349101 CDS YP_001044216.1 126463102 4896790 2476772..2477485 1 NC_009049.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0687 predicted hydrolase (haloacid dehalogenase (HAD) superfamily); hydrolase 2477485 4896790 Rsph17029_2342 Rhodobacter sphaeroides ATCC 17029 hydrolase YP_001044216.1 2476772 D 349101 CDS YP_001044217.1 126463103 4897168 2477665..2479089 1 NC_009049.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: rsp:RSP_0688 probable penicillin-binding protein; serine-type D-Ala-D-Ala carboxypeptidase 2479089 4897168 Rsph17029_2343 Rhodobacter sphaeroides ATCC 17029 serine-type D-Ala-D-Ala carboxypeptidase YP_001044217.1 2477665 D 349101 CDS YP_001044218.1 126463104 4897118 complement(2479197..2479355) 1 NC_009049.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rsp:RSP_0689 RdxS, cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 2479355 4897118 Rsph17029_2344 Rhodobacter sphaeroides ATCC 17029 cbb3-type cytochrome oxidase maturation protein YP_001044218.1 2479197 R 349101 CDS YP_001044219.1 126463105 4896854 complement(2479355..2481568) 1 NC_009049.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_0690 copper-translocating P-type ATPase, RdxI; heavy metal translocating P-type ATPase 2481568 4896854 Rsph17029_2345 Rhodobacter sphaeroides ATCC 17029 heavy metal translocating P-type ATPase YP_001044219.1 2479355 R 349101 CDS YP_001044220.1 126463106 4896828 complement(2481572..2482030) 1 NC_009049.1 PFAM: FixH family protein; KEGG: rsp:RSP_0691 RdxH; FixH family protein 2482030 4896828 Rsph17029_2346 Rhodobacter sphaeroides ATCC 17029 FixH family protein YP_001044220.1 2481572 R 349101 CDS YP_001044221.1 126463107 4896538 complement(2482032..2483465) 1 NC_009049.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_0692 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 2483465 4896538 Rsph17029_2347 Rhodobacter sphaeroides ATCC 17029 4Fe-4S ferredoxin YP_001044221.1 2482032 R 349101 CDS YP_001044222.1 126463108 4896895 complement(2483700..2484572) 1 NC_009049.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: rsp:RSP_0693 Cbb3-type cytochrome c oxidase CcoP subunit; cytochrome c oxidase, cbb3-type subunit III 2484572 4896895 Rsph17029_2348 Rhodobacter sphaeroides ATCC 17029 cytochrome c oxidase, cbb3-type subunit III YP_001044222.1 2483700 R 349101 CDS YP_001044223.1 126463109 4896932 complement(2484569..2484772) 1 NC_009049.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: rsp:RSP_0694 Cbb3-type cytochrome c oxidase CcoQ subunit; cbb3-type cytochrome oxidase subunit 2484772 4896932 Rsph17029_2349 Rhodobacter sphaeroides ATCC 17029 cbb3-type cytochrome oxidase subunit YP_001044223.1 2484569 R 349101 CDS YP_001044224.1 126463110 4896724 complement(2484785..2485510) 1 NC_009049.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 2485510 4896724 Rsph17029_2350 Rhodobacter sphaeroides ATCC 17029 cbb3-type cytochrome c oxidase subunit II YP_001044224.1 2484785 R 349101 CDS YP_001044225.1 126463111 4896949 complement(2485527..2487134) 1 NC_009049.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 2487134 4896949 Rsph17029_2351 Rhodobacter sphaeroides ATCC 17029 cbb3-type cytochrome c oxidase subunit I YP_001044225.1 2485527 R 349101 CDS YP_001044226.1 126463112 4896978 2487330..2488178 1 NC_009049.1 PFAM: UspA domain protein; KEGG: rsp:RSP_0697 universal stress protein (Usp); UspA domain-containing protein 2488178 4896978 Rsph17029_2352 Rhodobacter sphaeroides ATCC 17029 UspA domain-containing protein YP_001044226.1 2487330 D 349101 CDS YP_001044227.1 126463113 4897928 complement(2488258..2489004) 1 NC_009049.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rsp:RSP_0698 Crp-Fnr regulatory protein (FnrL); CRP/FNR family transcriptional regulator 2489004 4897928 Rsph17029_2353 Rhodobacter sphaeroides ATCC 17029 CRP/FNR family transcriptional regulator YP_001044227.1 2488258 R 349101 CDS YP_001044228.1 126463114 4897966 2489067..2490419 1 NC_009049.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2490419 4897966 Rsph17029_2354 Rhodobacter sphaeroides ATCC 17029 coproporphyrinogen III oxidase YP_001044228.1 2489067 D 349101 CDS YP_001044229.1 126463115 4895141 complement(2490430..2491653) 1 NC_009049.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_0700 probable glycosyltransferase; group 1 glycosyl transferase 2491653 4895141 Rsph17029_2355 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001044229.1 2490430 R 349101 CDS YP_001044230.1 126463116 4897051 complement(2491659..2493290) 1 NC_009049.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_0701 ABC peptide transporter, fused ATPase domains; ABC transporter 2493290 4897051 Rsph17029_2356 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044230.1 2491659 R 349101 CDS YP_001044231.1 126463117 4897049 complement(2493287..2494393) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0702 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2494393 4897049 Rsph17029_2357 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001044231.1 2493287 R 349101 CDS YP_001044232.1 126463118 4897042 complement(2494395..2495483) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0703 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2495483 4897042 Rsph17029_2358 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001044232.1 2494395 R 349101 CDS YP_001044233.1 126463119 4897098 complement(2495499..2497436) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_0704 ABC peptide transporter, substrate binding protein; extracellular solute-binding protein 2497436 4897098 Rsph17029_2359 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001044233.1 2495499 R 349101 CDS YP_001044234.1 126463120 4897761 complement(2497605..2498129) 1 NC_009049.1 PFAM: cytochrome c, class I; KEGG: rsp:RSP_0705 cytochrome cy; cytochrome c, class I 2498129 4897761 Rsph17029_2360 Rhodobacter sphaeroides ATCC 17029 cytochrome c, class I YP_001044234.1 2497605 R 349101 CDS YP_001044235.1 126463121 4897968 2498250..2499083 1 NC_009049.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 2499083 4897968 Rsph17029_2361 Rhodobacter sphaeroides ATCC 17029 prephenate dehydratase YP_001044235.1 2498250 D 349101 CDS YP_001044236.1 126463122 4897109 complement(2499114..2499620) 1 NC_009049.1 KEGG: rsp:RSP_0707 hypothetical protein; hypothetical protein 2499620 4897109 Rsph17029_2362 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044236.1 2499114 R 349101 CDS YP_001044237.1 126463123 4897156 complement(2499658..2500611) 1 NC_009049.1 PFAM: NUDIX hydrolase; KEGG: rsp:RSP_0708 NUDIX hydrolase; NUDIX hydrolase 2500611 4897156 Rsph17029_2363 Rhodobacter sphaeroides ATCC 17029 NUDIX hydrolase YP_001044237.1 2499658 R 349101 CDS YP_001044238.1 126463124 4897167 2500845..2502737 1 NC_009049.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rsp:RSP_0709 2',3'-cyclic-nucleotide 2'-phosphodiesterase; 5'-nucleotidase domain-containing protein 2502737 4897167 Rsph17029_2364 Rhodobacter sphaeroides ATCC 17029 5'-nucleotidase domain-containing protein YP_001044238.1 2500845 D 349101 CDS YP_001044239.1 126463125 4896669 2503060..2504802 1 NC_009049.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 2504802 4896669 Rsph17029_2365 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunits gamma and tau YP_001044239.1 2503060 D 349101 CDS YP_001044240.1 126463126 4897185 2504815..2505159 1 NC_009049.1 PFAM: conserved hypothetical protein 103; KEGG: rsp:RSP_0711 hypothetical protein; hypothetical protein 2505159 4897185 Rsph17029_2366 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044240.1 2504815 D 349101 CDS YP_001044241.1 126463127 4897183 2505161..2505760 1 NC_009049.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2505760 recR 4897183 recR Rhodobacter sphaeroides ATCC 17029 recombination protein RecR YP_001044241.1 2505161 D 349101 CDS YP_001044242.1 126463128 4897161 complement(2505840..2507060) 1 NC_009049.1 KEGG: rsp:RSP_0713 hypothetical protein; hypothetical protein 2507060 4897161 Rsph17029_2368 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044242.1 2505840 R 349101 CDS YP_001044243.1 126463129 4897220 complement(2507256..2508002) 1 NC_009049.1 PFAM: protein of unknown function DUF1013; KEGG: rsp:RSP_0714 hypothetical protein; hypothetical protein 2508002 4897220 Rsph17029_2369 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044243.1 2507256 R 349101 CDS YP_001044244.1 126463130 4897773 2508124..2508744 1 NC_009049.1 PFAM: ribonuclease T2; KEGG: rsp:RSP_0715 ribonuclease T2; ribonuclease T2 2508744 4897773 Rsph17029_2370 Rhodobacter sphaeroides ATCC 17029 ribonuclease T2 YP_001044244.1 2508124 D 349101 CDS YP_001044245.1 126463131 4897200 complement(2509047..2510033) 1 NC_009049.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0716 NADPH/quinone reductase and related Zn-dependent oxidoreductase; alcohol dehydrogenase 2510033 4897200 Rsph17029_2371 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001044245.1 2509047 R 349101 CDS YP_001044246.1 126463132 4897191 complement(2510177..2510869) 1 NC_009049.1 TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein; KEGG: rsp:RSP_0717 hypothetical protein; rpsU-divergently transcribed protein 2510869 4897191 Rsph17029_2372 Rhodobacter sphaeroides ATCC 17029 rpsU-divergently transcribed protein YP_001044246.1 2510177 R 349101 CDS YP_001044247.1 126463133 4897297 2511076..2511282 1 NC_009049.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2511282 rpsU 4897297 rpsU Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S21 YP_001044247.1 2511076 D 349101 CDS YP_001044248.1 126463134 4897222 2511556..2512254 1 NC_009049.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2512254 4897222 Rsph17029_2374 Rhodobacter sphaeroides ATCC 17029 phosphatidylserine decarboxylase YP_001044248.1 2511556 D 349101 CDS YP_001044249.1 126463135 4897308 2512258..2512995 1 NC_009049.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_0720 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2512995 4897308 Rsph17029_2375 Rhodobacter sphaeroides ATCC 17029 CDP-alcohol phosphatidyltransferase YP_001044249.1 2512258 D 349101 CDS YP_001044250.1 126463136 4897317 2513019..2513633 1 NC_009049.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0721 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 2513633 4897317 Rsph17029_2376 Rhodobacter sphaeroides ATCC 17029 phosphatidylethanolamine N-methyltransferase YP_001044250.1 2513019 D 349101 CDS YP_001044251.1 126463137 4897302 complement(2513672..2514130) 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; regulatory protein, MarR; KEGG: rsp:RSP_0722 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2514130 4897302 Rsph17029_2377 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001044251.1 2513672 R 349101 CDS YP_001044252.1 126463138 4897215 2514270..2515388 1 NC_009049.1 TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; alanine dehydrogenase/PNT domain protein; KEGG: rsp:RSP_0723 alanine dehydrogenase; alanine dehydrogenase 2515388 4897215 Rsph17029_2378 Rhodobacter sphaeroides ATCC 17029 alanine dehydrogenase YP_001044252.1 2514270 D 349101 CDS YP_001044253.1 126463139 4897338 complement(2515662..2516102) 1 NC_009049.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2516102 mscL 4897338 mscL Rhodobacter sphaeroides ATCC 17029 large-conductance mechanosensitive channel YP_001044253.1 2515662 R 349101 CDS YP_001044254.1 126463140 4897381 complement(2516566..2517117) 1 NC_009049.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_0725 thioredoxin, thioldisulfide interchange protein; alkyl hydroperoxide reductase 2517117 4897381 Rsph17029_2380 Rhodobacter sphaeroides ATCC 17029 alkyl hydroperoxide reductase YP_001044254.1 2516566 R 349101 CDS YP_001044255.1 126463141 4897833 2517139..2518554 1 NC_009049.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2518554 4897833 Rsph17029_2381 Rhodobacter sphaeroides ATCC 17029 argininosuccinate lyase YP_001044255.1 2517139 D 349101 CDS YP_001044256.1 126463142 4895987 2518706..2518924 1 NC_009049.1 KEGG: rsp:RSP_0727 hypothetical protein; hypothetical protein 2518924 4895987 Rsph17029_2382 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044256.1 2518706 D 349101 CDS YP_001044257.1 126463143 4897938 2518926..2519243 1 NC_009049.1 KEGG: rsp:RSP_0728 hypothetical protein; hypothetical protein 2519243 4897938 Rsph17029_2383 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044257.1 2518926 D 349101 CDS YP_001044258.1 126463144 4897404 2519439..2520704 1 NC_009049.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rsp:RSP_0729 Orn/DAP/Arg decarboxylase, family 2; diaminopimelate decarboxylase 2520704 4897404 Rsph17029_2384 Rhodobacter sphaeroides ATCC 17029 diaminopimelate decarboxylase YP_001044258.1 2519439 D 349101 CDS YP_001044259.1 126463145 4897428 2520733..2523237 1 NC_009049.1 KEGG: rsp:RSP_0730 hypothetical protein; hypothetical protein 2523237 4897428 Rsph17029_2385 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044259.1 2520733 D 349101 CDS YP_001044260.1 126463146 4897467 complement(2523421..2524527) 1 NC_009049.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: rsp:RSP_0732 hypothetical protein; Zinc finger-domain-containing protein 2524527 4897467 Rsph17029_2386 Rhodobacter sphaeroides ATCC 17029 Zinc finger-domain-containing protein YP_001044260.1 2523421 R 349101 CDS YP_001044261.1 126463147 4897436 2524691..2525362 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0733 cell division ATP-binding protein FtsE; ABC transporter 2525362 4897436 Rsph17029_2387 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044261.1 2524691 D 349101 CDS YP_001044262.1 126463148 4897473 2525359..2526261 1 NC_009049.1 PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_0734 cell division protein FtsX; hypothetical protein 2526261 4897473 Rsph17029_2388 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044262.1 2525359 D 349101 CDS YP_001044263.1 126463149 4895065 2526263..2526988 1 NC_009049.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rsp:RSP_0735 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2526988 4895065 Rsph17029_2389 Rhodobacter sphaeroides ATCC 17029 phospholipid/glycerol acyltransferase YP_001044263.1 2526263 D 349101 CDS YP_001044264.1 126463150 4897483 complement(2527001..2527591) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0736 MobC protein; N-acetyltransferase GCN5 2527591 4897483 Rsph17029_2390 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044264.1 2527001 R 349101 CDS YP_001044265.1 126463151 4897541 complement(2527588..2528946) 1 NC_009049.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rsp:RSP_0737 molybdopterin guanine dinucleotide synthesis; putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/hypothetical protein 2528946 4897541 Rsph17029_2391 Rhodobacter sphaeroides ATCC 17029 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/hypothetical protein YP_001044265.1 2527588 R 349101 CDS YP_001044266.1 126463152 4897540 complement(2528943..2529524) 1 NC_009049.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: rsp:RSP_0738 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2529524 4897540 Rsph17029_2392 Rhodobacter sphaeroides ATCC 17029 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_001044266.1 2528943 R 349101 CDS YP_001044267.1 126463153 4897553 2529600..2530307 1 NC_009049.1 PFAM: AzlC family protein; KEGG: rsp:RSP_0739 branched chain amino acid efflux pump, large (AzlC) subunit; AzlC family protein 2530307 4897553 Rsph17029_2393 Rhodobacter sphaeroides ATCC 17029 AzlC family protein YP_001044267.1 2529600 D 349101 CDS YP_001044268.1 126463154 4897551 2530304..2530636 1 NC_009049.1 PFAM: branched-chain amino acid transport; KEGG: rsp:RSP_6126 putative transmembrane protein; branched-chain amino acid transport 2530636 4897551 Rsph17029_2394 Rhodobacter sphaeroides ATCC 17029 branched-chain amino acid transport YP_001044268.1 2530304 D 349101 CDS YP_001044269.1 126463155 4897549 complement(2530665..2531276) 1 NC_009049.1 KEGG: rsp:RSP_6127 hypothetical protein; hypothetical protein 2531276 4897549 Rsph17029_2395 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044269.1 2530665 R 349101 CDS YP_001044270.1 126463156 4897579 complement(2531311..2531496) 1 NC_009049.1 PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: rsp:RSP_6128 Aa3-type cytochrome c oxidase subunit IV; aa3 type cytochrome c oxidase subunit IV 2531496 4897579 Rsph17029_2396 Rhodobacter sphaeroides ATCC 17029 aa3 type cytochrome c oxidase subunit IV YP_001044270.1 2531311 R 349101 CDS YP_001044271.1 126463157 4897584 complement(2531556..2532590) 1 NC_009049.1 PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_0741 putative metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 2532590 4897584 Rsph17029_2397 Rhodobacter sphaeroides ATCC 17029 beta-lactamase domain-containing protein YP_001044271.1 2531556 R 349101 CDS YP_001044272.1 126463158 4897701 complement(2532587..2534275) 1 NC_009049.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_0742 probable acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2534275 4897701 Rsph17029_2398 Rhodobacter sphaeroides ATCC 17029 acyl-CoA dehydrogenase domain-containing protein YP_001044272.1 2532587 R 349101 CDS YP_001044273.1 126463159 4897693 2534384..2535322 1 NC_009049.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: rsp:RSP_0743 putative translation factor; Sua5/YciO/YrdC/YwlC family protein 2535322 4897693 Rsph17029_2399 Rhodobacter sphaeroides ATCC 17029 Sua5/YciO/YrdC/YwlC family protein YP_001044273.1 2534384 D 349101 CDS YP_001044274.1 126463160 4897856 complement(2535465..2536112) 1 NC_009049.1 KEGG: rsp:RSP_0744 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 2536112 4897856 Rsph17029_2400 Rhodobacter sphaeroides ATCC 17029 DNA-3-methyladenine glycosylase I YP_001044274.1 2535465 R 349101 CDS YP_001044275.1 126463161 4897740 2536322..2537497 1 NC_009049.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 2537497 4897740 Rsph17029_2401 Rhodobacter sphaeroides ATCC 17029 acetyl-CoA acetyltransferase YP_001044275.1 2536322 D 349101 CDS YP_001044276.1 126463162 4897739 2537597..2538319 1 NC_009049.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0747 short-chain dehydrogenase/reductase; acetoacetyl-CoA reductase 2538319 4897739 Rsph17029_2402 Rhodobacter sphaeroides ATCC 17029 acetoacetyl-CoA reductase YP_001044276.1 2537597 D 349101 CDS YP_001044277.1 126463163 4897753 complement(2538462..2538647) 1 NC_009049.1 PFAM: protein of unknown function DUF465; KEGG: pde:Pden_2028 protein of unknown function DUF465; hypothetical protein 2538647 4897753 Rsph17029_2403 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044277.1 2538462 R 349101 CDS YP_001044278.1 126463164 4897751 complement(2538728..2539489) 1 NC_009049.1 PFAM: methyltransferase small; Methyltransferase type 11; KEGG: rsp:RSP_0748 N-6 adenine-specific DNA methylase; methyltransferase small 2539489 4897751 Rsph17029_2404 Rhodobacter sphaeroides ATCC 17029 methyltransferase small YP_001044278.1 2538728 R 349101 CDS YP_001044279.1 126463165 4897747 complement(2539489..2539704) 1 NC_009049.1 KEGG: rsp:RSP_0749 hypothetical protein; hypothetical protein 2539704 4897747 Rsph17029_2405 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044279.1 2539489 R 349101 CDS YP_001044280.1 126463166 4897765 2539773..2540774 1 NC_009049.1 PFAM: Polyprenyl synthetase; KEGG: rsp:RSP_0750 geranylgeranyl pyrophosphate synthase/polyprenyl synthetase; trans-hexaprenyltranstransferase 2540774 4897765 Rsph17029_2406 Rhodobacter sphaeroides ATCC 17029 trans-hexaprenyltranstransferase YP_001044280.1 2539773 D 349101 CDS YP_001044281.1 126463167 4897781 2541096..2541563 1 NC_009049.1 PFAM: protein of unknown function DUF1052; KEGG: rsp:RSP_0751 hypothetical protein; hypothetical protein 2541563 4897781 Rsph17029_2407 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044281.1 2541096 D 349101 CDS YP_001044282.1 126463168 4897716 complement(2541564..2541785) 1 NC_009049.1 KEGG: rsp:RSP_6129 hypothetical protein; hypothetical protein 2541785 4897716 Rsph17029_2408 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044282.1 2541564 R 349101 CDS YP_001044283.1 126463169 4897770 2541901..2542386 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0752 acetyltransferase (GNAT) family; N-acetyltransferase GCN5 2542386 4897770 Rsph17029_2409 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044283.1 2541901 D 349101 CDS YP_001044284.1 126463170 4896484 complement(2543156..2544028) 1 NC_009049.1 PFAM: protein of unknown function DUF481; KEGG: rsp:RSP_0753 salt-stress induced outer membrane protein; hypothetical protein 2544028 4896484 Rsph17029_2410 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044284.1 2543156 R 349101 CDS YP_001044285.1 126463171 4897797 complement(2544236..2544556) 1 NC_009049.1 KEGG: rsp:RSP_0754 hypothetical protein; hypothetical protein 2544556 4897797 Rsph17029_2411 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044285.1 2544236 R 349101 CDS YP_001044286.1 126463172 4897791 complement(2544872..2545345) 1 NC_009049.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rsp:RSP_0755 putative N utilization substance protein B; NusB antitermination factor 2545345 4897791 Rsph17029_2412 Rhodobacter sphaeroides ATCC 17029 NusB antitermination factor YP_001044286.1 2544872 R 349101 CDS YP_001044287.1 126463173 4897769 complement(2545342..2545878) 1 NC_009049.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2545878 ribH 4897769 ribH Rhodobacter sphaeroides ATCC 17029 6,7-dimethyl-8-ribityllumazine synthase YP_001044287.1 2545342 R 349101 CDS YP_001044288.1 126463174 4897808 complement(2545882..2546985) 1 NC_009049.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: rsp:RSP_0757 bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2546985 4897808 Rsph17029_2414 Rhodobacter sphaeroides ATCC 17029 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001044288.1 2545882 R 349101 CDS YP_001044289.1 126463175 4896865 2547032..2547319 1 NC_009049.1 hypothetical protein 2547319 4896865 Rsph17029_2415 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044289.1 2547032 D 349101 CDS YP_001044290.1 126463176 4897800 complement(2547301..2547861) 1 NC_009049.1 KEGG: rsp:RSP_6130 hypothetical protein; hypothetical protein 2547861 4897800 Rsph17029_2416 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044290.1 2547301 R 349101 CDS YP_001044291.1 126463177 4897799 complement(2547863..2548459) 1 NC_009049.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2548459 4897799 Rsph17029_2417 Rhodobacter sphaeroides ATCC 17029 riboflavin synthase subunit alpha YP_001044291.1 2547863 R 349101 CDS YP_001044292.1 126463178 4897930 2548671..2549807 1 NC_009049.1 PFAM: polysaccharide export protein; KEGG: rsp:RSP_0759 putative capsule polysaccharide exporter; polysaccharide export protein 2549807 4897930 Rsph17029_2418 Rhodobacter sphaeroides ATCC 17029 polysaccharide export protein YP_001044292.1 2548671 D 349101 CDS YP_001044293.1 126463179 4897814 complement(2550238..2550735) 1 NC_009049.1 PFAM: regulatory protein, MarR; KEGG: rsp:RSP_0760 transcriptional regulator, MarR family; MarR family transcriptional regulator 2550735 4897814 Rsph17029_2419 Rhodobacter sphaeroides ATCC 17029 MarR family transcriptional regulator YP_001044293.1 2550238 R 349101 CDS YP_001044294.1 126463180 4897812 complement(2550825..2551094) 1 NC_009049.1 PFAM: protein of unknown function DUF339; KEGG: rsp:RSP_0761 hypothetical protein; hypothetical protein 2551094 4897812 Rsph17029_2420 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044294.1 2550825 R 349101 CDS YP_001044295.1 126463181 4897154 complement(2551091..2551489) 1 NC_009049.1 PFAM: helix-turn-helix domain protein; KEGG: rsp:RSP_0762 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 2551489 4897154 Rsph17029_2421 Rhodobacter sphaeroides ATCC 17029 helix-turn-helix domain-containing protein YP_001044295.1 2551091 R 349101 CDS YP_001044296.1 126463182 4897826 2551604..2552806 1 NC_009049.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2552806 4897826 Rsph17029_2422 Rhodobacter sphaeroides ATCC 17029 aspartate aminotransferase YP_001044296.1 2551604 D 349101 CDS YP_001044297.1 126463183 4897824 complement(2552878..2554233) 1 NC_009049.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rsp:RSP_0764 multi antimicrobial extrusion (MATE) family efflux pump NorM; MATE efflux family protein 2554233 4897824 Rsph17029_2423 Rhodobacter sphaeroides ATCC 17029 MATE efflux family protein YP_001044297.1 2552878 R 349101 CDS YP_001044298.1 126463184 4897842 complement(2554284..2554925) 1 NC_009049.1 PFAM: Methyltransferase type 11; KEGG: rsp:RSP_0765 SAM-dependent methyltransferase; type 11 methyltransferase 2554925 4897842 Rsph17029_2424 Rhodobacter sphaeroides ATCC 17029 type 11 methyltransferase YP_001044298.1 2554284 R 349101 CDS YP_001044299.1 126463185 4897840 complement(2554922..2555944) 1 NC_009049.1 PFAM: protein of unknown function DUF344; KEGG: rsp:RSP_0766 hypothetical protein; hypothetical protein 2555944 4897840 Rsph17029_2425 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044299.1 2554922 R 349101 CDS YP_001044300.1 126463186 4897838 complement(2556183..2557919) 1 NC_009049.1 PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_0768 transcriptional regulator, LuxR family; regulatory protein LuxR 2557919 4897838 Rsph17029_2426 Rhodobacter sphaeroides ATCC 17029 regulatory protein LuxR YP_001044300.1 2556183 R 349101 CDS YP_001044301.1 126463187 4897821 2558008..2558667 1 NC_009049.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_0769 glutathione S-transferase; glutathione S-transferase domain-containing protein 2558667 4897821 Rsph17029_2427 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase domain-containing protein YP_001044301.1 2558008 D 349101 CDS YP_001044302.1 126463188 4897887 2558728..2560719 1 NC_009049.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2560719 4897887 Rsph17029_2428 Rhodobacter sphaeroides ATCC 17029 DNA topoisomerase IV subunit B YP_001044302.1 2558728 D 349101 CDS YP_001044303.1 126463189 4897879 complement(2560938..2562158) 1 NC_009049.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 2562158 4897879 Rsph17029_2429 Rhodobacter sphaeroides ATCC 17029 mannonate dehydratase YP_001044303.1 2560938 R 349101 CDS YP_001044304.1 126463190 4897846 complement(2562650..2564971) 1 NC_009049.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: rsp:RSP_0774 RNA binding protein; RNA-binding S1 domain-containing protein 2564971 4897846 Rsph17029_2430 Rhodobacter sphaeroides ATCC 17029 RNA-binding S1 domain-containing protein YP_001044304.1 2562650 R 349101 CDS YP_001044305.1 126463191 4897907 complement(2565055..2565444) 1 NC_009049.1 KEGG: rsp:RSP_0775 class I monoheme cytochrome c; class I monoheme cytochrome c 2565444 4897907 Rsph17029_2431 Rhodobacter sphaeroides ATCC 17029 class I monoheme cytochrome c YP_001044305.1 2565055 R 349101 CDS YP_001044306.1 126463192 4897893 complement(2565503..2566177) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0776 ABC lipoprotein efflux transporter, ATPase subunit, LolD; ABC transporter 2566177 4897893 Rsph17029_2432 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044306.1 2565503 R 349101 CDS YP_001044307.1 126463193 4897931 complement(2566170..2567456) 1 NC_009049.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_0777 ABC lipoprotein efflux transporter, inner membrane subunit, LolE; LolC/E family lipoprotein releasing system, transmembrane protein 2567456 4897931 Rsph17029_2433 Rhodobacter sphaeroides ATCC 17029 LolC/E family lipoprotein releasing system, transmembrane protein YP_001044307.1 2566170 R 349101 CDS YP_001044308.1 126463194 4897929 complement(2567572..2568909) 1 NC_009049.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2568909 4897929 Rsph17029_2434 Rhodobacter sphaeroides ATCC 17029 prolyl-tRNA synthetase YP_001044308.1 2567572 R 349101 CDS YP_001044309.1 126463195 4897926 2569361..2570437 1 NC_009049.1 PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_0779 lipocalin-related protein and Bos/Can/Equ allergen; hypothetical protein 2570437 4897926 Rsph17029_2435 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044309.1 2569361 D 349101 CDS YP_001044310.1 126463196 4897912 2570434..2571114 1 NC_009049.1 PFAM: Chromosomal replication initiator, DnaA; KEGG: rsp:RSP_0780 hypothetical protein with ATP/GTP-binding site; chromosomal replication initiator DnaA 2571114 4897912 Rsph17029_2436 Rhodobacter sphaeroides ATCC 17029 chromosomal replication initiator DnaA YP_001044310.1 2570434 D 349101 CDS YP_001044311.1 126463197 4897964 2571174..2573360 1 NC_009049.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2573360 4897964 Rsph17029_2437 Rhodobacter sphaeroides ATCC 17029 polyphosphate kinase YP_001044311.1 2571174 D 349101 CDS YP_001044312.1 126463198 4897958 2573497..2575038 1 NC_009049.1 PFAM: Ppx/GppA phosphatase; KEGG: rsp:RSP_0782 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2575038 4897958 Rsph17029_2438 Rhodobacter sphaeroides ATCC 17029 Ppx/GppA phosphatase YP_001044312.1 2573497 D 349101 CDS YP_001044313.1 126463199 4897956 2575035..2575637 1 NC_009049.1 KEGG: rsp:RSP_0783 hypothetical protein; hypothetical protein 2575637 4897956 Rsph17029_2439 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044313.1 2575035 D 349101 CDS YP_001044314.1 126463200 4897955 2575660..2576136 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0784 putative acetyltransferase, GNAT family; N-acetyltransferase GCN5 2576136 4897955 Rsph17029_2440 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044314.1 2575660 D 349101 CDS YP_001044315.1 126463201 4897971 2576168..2576851 1 NC_009049.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rsp:RSP_0785 putative heat shock protein DnaJ; heat shock protein DnaJ domain-containing protein 2576851 4897971 Rsph17029_2441 Rhodobacter sphaeroides ATCC 17029 heat shock protein DnaJ domain-containing protein YP_001044315.1 2576168 D 349101 CDS YP_001044316.1 126463202 4895219 2576852..2577871 1 NC_009049.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_0786 possible endonuclease/exonuclease/phosphatase fa; endonuclease/exonuclease/phosphatase 2577871 4895219 Rsph17029_2442 Rhodobacter sphaeroides ATCC 17029 endonuclease/exonuclease/phosphatase YP_001044316.1 2576852 D 349101 CDS YP_001044317.1 126463203 4897970 2578390..2578806 1 NC_009049.1 KEGG: rsp:RSP_0787 hypothetical protein; hypothetical protein 2578806 4897970 Rsph17029_2443 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044317.1 2578390 D 349101 CDS YP_001044318.1 126463204 4897944 2578803..2579636 1 NC_009049.1 KEGG: rsp:RSP_0788 hypothetical protein; hypothetical protein 2579636 4897944 Rsph17029_2444 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044318.1 2578803 D 349101 CDS YP_001044319.1 126463205 4897954 2579646..2580620 1 NC_009049.1 PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_0789 aminotransferase, class-I; class I and II aminotransferase 2580620 4897954 Rsph17029_2445 Rhodobacter sphaeroides ATCC 17029 class I and II aminotransferase YP_001044319.1 2579646 D 349101 CDS YP_001044320.1 126463206 4897898 complement(2580721..2581863) 1 NC_009049.1 KEGG: rsp:RSP_0790 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE 2581863 4897898 Rsph17029_2446 Rhodobacter sphaeroides ATCC 17029 pyrroloquinoline quinone biosynthesis protein PqqE YP_001044320.1 2580721 R 349101 CDS YP_001044321.1 126463207 4897736 complement(2581863..2582159) 1 NC_009049.1 PFAM: coenzyme PQQ synthesis D; KEGG: rsp:RSP_0791 putative pyrroloquinoline quinone synthesis protein D; coenzyme PQQ biosynthesis protein PqqD 2582159 4897736 Rsph17029_2447 Rhodobacter sphaeroides ATCC 17029 coenzyme PQQ biosynthesis protein PqqD YP_001044321.1 2581863 R 349101 CDS YP_001044322.1 126463208 4897720 complement(2582156..2582923) 1 NC_009049.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 2582923 4897720 Rsph17029_2448 Rhodobacter sphaeroides ATCC 17029 pyrroloquinoline quinone biosynthesis protein PqqC YP_001044322.1 2582156 R 349101 CDS YP_001044323.1 126463209 4897177 complement(2582920..2583822) 1 NC_009049.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 2583822 4897177 Rsph17029_2449 Rhodobacter sphaeroides ATCC 17029 pyrroloquinoline quinone biosynthesis protein PqqB YP_001044323.1 2582920 R 349101 CDS YP_001044324.1 126463210 4895992 complement(2583841..2583921) 1 NC_009049.1 Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme; coenzyme PQQ synthesis protein PqqA 2583921 pqqA 4895992 pqqA Rhodobacter sphaeroides ATCC 17029 coenzyme PQQ synthesis protein PqqA YP_001044324.1 2583841 R 349101 CDS YP_001044325.1 126463211 4896534 complement(2584153..2585109) 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_0794 transcriptional regulator, LysR family; LysR family transcriptional regulator 2585109 4896534 Rsph17029_2451 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044325.1 2584153 R 349101 CDS YP_001044326.1 126463212 4896613 complement(2585456..2585875) 1 NC_009049.1 PFAM: DGPFAETKE family protein; KEGG: rsp:RSP_0795 hypothetical protein; DGPFAETKE family protein 2585875 4896613 Rsph17029_2452 Rhodobacter sphaeroides ATCC 17029 DGPFAETKE family protein YP_001044326.1 2585456 R 349101 CDS YP_001044327.1 126463213 4896954 2586021..2587466 1 NC_009049.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2587466 4896954 Rsph17029_2453 Rhodobacter sphaeroides ATCC 17029 cobyric acid synthase YP_001044327.1 2586021 D 349101 CDS YP_001044328.1 126463214 4897656 2587517..2587900 1 NC_009049.1 KEGG: rsp:RSP_6229 hypothetical protein; hypothetical protein 2587900 4897656 Rsph17029_2454 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044328.1 2587517 D 349101 CDS YP_001044329.1 126463215 4897091 complement(2587901..2589226) 1 NC_009049.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2589226 gltX 4897091 gltX Rhodobacter sphaeroides ATCC 17029 glutamyl-tRNA synthetase YP_001044329.1 2587901 R 349101 CDS YP_001044330.1 126463216 4897494 2589518..2589928 1 NC_009049.1 PFAM: protein of unknown function DUF1025; KEGG: rsp:RSP_0798 neutral zinc metallopeptidase; hypothetical protein 2589928 4897494 Rsph17029_2456 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044330.1 2589518 D 349101 CDS YP_001044331.1 126463217 4896578 2590022..2590945 1 NC_009049.1 PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_0799 hypothetical protein; beta-lactamase domain-containing protein 2590945 4896578 Rsph17029_2457 Rhodobacter sphaeroides ATCC 17029 beta-lactamase domain-containing protein YP_001044331.1 2590022 D 349101 CDS YP_001044332.1 126463218 4895978 complement(2591164..2591421) 1 NC_009049.1 PFAM: protein of unknown function DUF167; KEGG: rsp:RSP_0800 hypothetical protein; hypothetical protein 2591421 4895978 Rsph17029_2458 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044332.1 2591164 R 349101 CDS YP_001044333.1 126463219 4897143 2591481..2592620 1 NC_009049.1 PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_0801 deacetylase / probable acetylpolyamine aminohydrolase; histone deacetylase superfamily protein 2592620 4897143 Rsph17029_2459 Rhodobacter sphaeroides ATCC 17029 histone deacetylase superfamily protein YP_001044333.1 2591481 D 349101 CDS YP_001044334.1 126463220 4895933 complement(2592962..2594029) 1 NC_009049.1 PFAM: peptidase M19, renal dipeptidase; KEGG: rsp:RSP_0802 dipeptidase; peptidase M19 2594029 4895933 Rsph17029_2460 Rhodobacter sphaeroides ATCC 17029 peptidase M19 YP_001044334.1 2592962 R 349101 CDS YP_001044335.1 126463221 4897270 complement(2594026..2594781) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0803 ABC dipeptide transporter, ATPase subunit DppF; ABC transporter 2594781 4897270 Rsph17029_2461 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044335.1 2594026 R 349101 CDS YP_001044336.1 126463222 4897565 complement(2594781..2595605) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0804 ABC dipeptide transporter, ATPase subunit DppD; ABC transporter 2595605 4897565 Rsph17029_2462 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044336.1 2594781 R 349101 CDS YP_001044337.1 126463223 4897450 complement(2595706..2596608) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0805 ABC dipeptide transporter, inner membrane subunit DppC; binding-protein-dependent transport system inner membrane protein 2596608 4897450 Rsph17029_2463 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001044337.1 2595706 R 349101 CDS YP_001044338.1 126463224 4895678 complement(2596605..2597675) 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0806 ABC dipeptide transporter, inner membrane subunit DppB; binding-protein-dependent transport system inner membrane protein 2597675 4895678 Rsph17029_2464 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001044338.1 2596605 R 349101 CDS YP_001044339.1 126463225 4897342 complement(2597676..2599265) 1 NC_009049.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_0807 ABC dipeptide transporter, substrate-binding subunit DdpA; extracellular solute-binding protein 2599265 4897342 Rsph17029_2465 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001044339.1 2597676 R 349101 CDS YP_001044340.1 126463226 4896118 2599593..2600171 1 NC_009049.1 PFAM: nitroreductase; KEGG: rsp:RSP_0809 hypothetical protein; nitroreductase 2600171 4896118 Rsph17029_2466 Rhodobacter sphaeroides ATCC 17029 nitroreductase YP_001044340.1 2599593 D 349101 CDS YP_001044341.1 126463227 4896624 2600168..2600860 1 NC_009049.1 KEGG: rsp:RSP_0810 hypothetical protein; hypothetical protein 2600860 4896624 Rsph17029_2467 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044341.1 2600168 D 349101 CDS YP_001044342.1 126463228 4897124 complement(2600875..2601156) 1 NC_009049.1 PFAM: protein of unknown function DUF1467; KEGG: rsp:RSP_0811 hypothetical protein; hypothetical protein 2601156 4897124 Rsph17029_2468 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044342.1 2600875 R 349101 CDS YP_001044343.1 126463229 4897307 complement(2601153..2601557) 1 NC_009049.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_0812 glyoxalase I (lactoylglutathione lyase); glyoxalase/bleomycin resistance protein/dioxygenase 2601557 4897307 Rsph17029_2469 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001044343.1 2601153 R 349101 CDS YP_001044344.1 126463230 4895497 2601814..2602515 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_0813 response regulator receiver protein; response regulator receiver protein 2602515 4895497 Rsph17029_2470 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001044344.1 2601814 D 349101 CDS YP_001044345.1 126463231 4895803 complement(2602783..2603496) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0814 acetyltransferase; N-acetyltransferase GCN5 2603496 4895803 Rsph17029_2471 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044345.1 2602783 R 349101 CDS YP_001044346.1 126463232 4895882 complement(2603500..2605275) 1 NC_009049.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2605275 aspS 4895882 aspS Rhodobacter sphaeroides ATCC 17029 aspartyl-tRNA synthetase YP_001044346.1 2603500 R 349101 CDS YP_001044347.1 126463233 4896548 complement(2605491..2606132) 1 NC_009049.1 KEGG: rsp:RSP_0816 putative aminotransferase, class IV; hypothetical protein 2606132 4896548 Rsph17029_2473 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044347.1 2605491 R 349101 CDS YP_001044348.1 126463234 4896725 complement(2606084..2607229) 1 NC_009049.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase 2607229 4896725 Rsph17029_2474 Rhodobacter sphaeroides ATCC 17029 aminodeoxychorismate synthase YP_001044348.1 2606084 R 349101 CDS YP_001044349.1 126463235 4897495 2607418..2610747 1 NC_009049.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 2610747 carB 4897495 carB Rhodobacter sphaeroides ATCC 17029 carbamoyl phosphate synthase large subunit YP_001044349.1 2607418 D 349101 CDS YP_001044350.1 126463236 4897614 2611350..2612735 1 NC_009049.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_0819 DEAD/DEAH box helicase; DEAD/DEAH box helicase 2612735 4897614 Rsph17029_2476 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001044350.1 2611350 D 349101 CDS YP_001044351.1 126463237 4895915 2613097..2613273 1 NC_009049.1 KEGG: rsp:RSP_6134 hypothetical protein; hypothetical protein 2613273 4895915 Rsph17029_2477 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044351.1 2613097 D 349101 CDS YP_001044352.1 126463238 4897221 2613303..2613812 1 NC_009049.1 PFAM: cytochrome B561; KEGG: rsp:RSP_0820 putative cytochrome b561; cytochrome B561 2613812 4897221 Rsph17029_2478 Rhodobacter sphaeroides ATCC 17029 cytochrome B561 YP_001044352.1 2613303 D 349101 CDS YP_001044353.1 126463239 4895373 complement(2613853..2614623) 1 NC_009049.1 PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_0821 esterase/lipase/thioesterase; alpha/beta hydrolase 2614623 4895373 Rsph17029_2479 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001044353.1 2613853 R 349101 CDS YP_001044354.1 126463240 4898081 2614717..2615088 1 NC_009049.1 KEGG: rsp:RSP_0822 hypothetical protein; hypothetical protein 2615088 4898081 Rsph17029_2480 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044354.1 2614717 D 349101 CDS YP_001044355.1 126463241 4895199 complement(2615161..2616456) 1 NC_009049.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2616456 glyA 4895199 glyA Rhodobacter sphaeroides ATCC 17029 serine hydroxymethyltransferase YP_001044355.1 2615161 R 349101 CDS YP_001044356.1 126463242 4897400 2616623..2617387 1 NC_009049.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2617387 ppnK 4897400 ppnK Rhodobacter sphaeroides ATCC 17029 inorganic polyphosphate/ATP-NAD kinase YP_001044356.1 2616623 D 349101 CDS YP_001044357.1 126463243 4897622 complement(2617384..2618061) 1 NC_009049.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2618061 4897622 Rsph17029_2483 Rhodobacter sphaeroides ATCC 17029 peptidyl-tRNA hydrolase YP_001044357.1 2617384 R 349101 CDS YP_001044358.1 126463244 4897638 2618194..2618508 1 NC_009049.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rsp:RSP_0826 hypothetical protein; antibiotic biosynthesis monooxygenase 2618508 4897638 Rsph17029_2484 Rhodobacter sphaeroides ATCC 17029 antibiotic biosynthesis monooxygenase YP_001044358.1 2618194 D 349101 CDS YP_001044359.1 126463245 4895682 complement(2618799..2619410) 1 NC_009049.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 2619410 4895682 Rsph17029_2485 Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L25/general stress protein Ctc YP_001044359.1 2618799 R 349101 CDS YP_001044360.1 126463246 4896054 2619698..2620855 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_0828 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 2620855 4896054 Rsph17029_2486 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001044360.1 2619698 D 349101 CDS YP_001044361.1 126463247 4897923 complement(2620860..2622023) 1 NC_009049.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rsp:RSP_0829 lactate dehydrogenase; L-lactate dehydrogenase (cytochrome) 2622023 4897923 Rsph17029_2487 Rhodobacter sphaeroides ATCC 17029 L-lactate dehydrogenase (cytochrome) YP_001044361.1 2620860 R 349101 CDS YP_001044362.1 126463248 4895789 complement(2622368..2623468) 1 NC_009049.1 PFAM: CBS domain containing protein; HPP family protein+B94; KEGG: rsp:RSP_0830 CBS-domain-containing membrane protein; hypothetical protein 2623468 4895789 Rsph17029_2488 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044362.1 2622368 R 349101 CDS YP_001044363.1 126463249 4896167 complement(2623513..2624304) 1 NC_009049.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2624304 trpA 4896167 trpA Rhodobacter sphaeroides ATCC 17029 tryptophan synthase subunit alpha YP_001044363.1 2623513 R 349101 CDS YP_001044364.1 126463250 4895234 2624808..2625905 1 NC_009049.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2625905 4895234 Rsph17029_2490 Rhodobacter sphaeroides ATCC 17029 GTP-dependent nucleic acid-binding protein EngD YP_001044364.1 2624808 D 349101 CDS YP_001044365.1 126463251 4895249 2626245..2627699 1 NC_009049.1 KEGG: rsp:RSP_0834 mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2627699 4895249 Rsph17029_2491 Rhodobacter sphaeroides ATCC 17029 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001044365.1 2626245 D 349101 CDS YP_001044366.1 126463252 4895717 2627696..2629072 1 NC_009049.1 PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rsp:RSP_0835 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 2629072 4895717 Rsph17029_2492 Rhodobacter sphaeroides ATCC 17029 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_001044366.1 2627696 D 349101 CDS YP_001044367.1 126463253 4896244 2629438..2631819 1 NC_009049.1 KEGG: rsp:RSP_6136 hypothetical protein; hypothetical protein 2631819 4896244 Rsph17029_2493 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044367.1 2629438 D 349101 CDS YP_001044368.1 126463254 4896747 2631981..2633159 1 NC_009049.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_0836 putative flavoprotein; hypothetical protein 2633159 4896747 Rsph17029_2494 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044368.1 2631981 D 349101 CDS YP_001044369.1 126463255 4896998 complement(2633134..2633829) 1 NC_009049.1 KEGG: rsp:RSP_0837 hypothetical protein; hypothetical protein 2633829 4896998 Rsph17029_2495 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044369.1 2633134 R 349101 CDS YP_001044370.1 126463256 4895325 complement(2633935..2634927) 1 NC_009049.1 PFAM: DNA polymerase III, delta; KEGG: rsp:RSP_0838 putative DNA polymerase III, delta subunit / DNA binding; DNA polymerase III subunit delta' 2634927 4895325 Rsph17029_2496 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit delta' YP_001044370.1 2633935 R 349101 CDS YP_001044371.1 126463257 4896464 complement(2634924..2635412) 1 NC_009049.1 KEGG: rsp:RSP_0839 predicted secreted periplasmic protein; secreted periplasmic protein 2635412 4896464 Rsph17029_2497 Rhodobacter sphaeroides ATCC 17029 secreted periplasmic protein YP_001044371.1 2634924 R 349101 CDS YP_001044372.1 126463258 4895451 complement(2635399..2637942) 1 NC_009049.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 2637942 leuS 4895451 leuS Rhodobacter sphaeroides ATCC 17029 leucyl-tRNA synthetase YP_001044372.1 2635399 R 349101 CDS YP_001044373.1 126463259 4895461 complement(2638063..2638599) 1 NC_009049.1 KEGG: rsp:RSP_0841 hypothetical protein; hypothetical protein 2638599 4895461 Rsph17029_2499 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044373.1 2638063 R 349101 CDS YP_001044374.1 126463260 4896754 2638883..2639872 1 NC_009049.1 KEGG: rsp:RSP_0842 putative porin; putative porin 2639872 4896754 Rsph17029_2500 Rhodobacter sphaeroides ATCC 17029 putative porin YP_001044374.1 2638883 D 349101 CDS YP_001044375.1 126463261 4897668 2640027..2642180 1 NC_009049.1 PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_0843 conserved protein containing sulfotransfer domain; sulfotransferase 2642180 4897668 Rsph17029_2501 Rhodobacter sphaeroides ATCC 17029 sulfotransferase YP_001044375.1 2640027 D 349101 CDS YP_001044376.1 126463262 4897373 2642173..2642838 1 NC_009049.1 PFAM: alanine racemase domain protein; KEGG: rsp:RSP_0844 hypothetical protein; alanine racemase domain-containing protein 2642838 4897373 Rsph17029_2502 Rhodobacter sphaeroides ATCC 17029 alanine racemase domain-containing protein YP_001044376.1 2642173 D 349101 CDS YP_001044377.1 126463263 4897405 complement(2642858..2643352) 1 NC_009049.1 KEGG: rsp:RSP_0845 hypothetical protein; hypothetical protein 2643352 4897405 Rsph17029_2503 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044377.1 2642858 R 349101 CDS YP_001044378.1 126463264 4897099 complement(2643349..2644437) 1 NC_009049.1 PFAM: GTP cyclohydrolase II; KEGG: rsp:RSP_0846 GTP cyclohydrolase II; GTP cyclohydrolase II 2644437 4897099 Rsph17029_2504 Rhodobacter sphaeroides ATCC 17029 GTP cyclohydrolase II YP_001044378.1 2643349 R 349101 CDS YP_001044379.1 126463265 4895076 2644590..2645276 1 NC_009049.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_0847 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2645276 4895076 Rsph17029_2505 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001044379.1 2644590 D 349101 CDS YP_001044380.1 126463266 4895625 2645579..2646367 1 NC_009049.1 TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_0848 exodeoxyribonuclease III; exodeoxyribonuclease III Xth 2646367 4895625 Rsph17029_2506 Rhodobacter sphaeroides ATCC 17029 exodeoxyribonuclease III Xth YP_001044380.1 2645579 D 349101 CDS YP_001044381.1 126463267 4897321 complement(2646398..2647021) 1 NC_009049.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_6137 transcriptional regulator, TetR family; TetR family transcriptional regulator 2647021 4897321 Rsph17029_2507 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001044381.1 2646398 R 349101 CDS YP_001044382.1 126463268 4895875 complement(2647073..2647201) 1 NC_009049.1 KEGG: rsp:RSP_6138 hypothetical protein; hypothetical protein 2647201 4895875 Rsph17029_2508 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044382.1 2647073 R 349101 CDS YP_001044383.1 126463269 4897227 2647367..2648344 1 NC_009049.1 PFAM: Rubrerythrin; protein of unknown function DUF125, transmembrane; KEGG: rsp:RSP_0850 hypothetical protein; rubrerythrin 2648344 4897227 Rsph17029_2509 Rhodobacter sphaeroides ATCC 17029 rubrerythrin YP_001044383.1 2647367 D 349101 CDS YP_001044384.1 126463270 4896247 2648703..2649632 1 NC_009049.1 PFAM: Auxin Efflux Carrier; KEGG: rsp:RSP_0851 putative transporter, AEC family; auxin efflux carrier 2649632 4896247 Rsph17029_2510 Rhodobacter sphaeroides ATCC 17029 auxin efflux carrier YP_001044384.1 2648703 D 349101 CDS YP_001044385.1 126463271 4897385 2649648..2650478 1 NC_009049.1 PFAM: putative esterase; KEGG: rsp:RSP_0852 S-formylglutathione hydrolase; carboxylesterase 2650478 4897385 Rsph17029_2511 Rhodobacter sphaeroides ATCC 17029 carboxylesterase YP_001044385.1 2649648 D 349101 CDS YP_001044386.1 126463272 4895624 2650471..2650959 1 NC_009049.1 PFAM: protein of unknown function DUF188; KEGG: rsp:RSP_0853 hypothetical protein; hypothetical protein 2650959 4895624 Rsph17029_2512 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044386.1 2650471 D 349101 CDS YP_001044387.1 126463273 4896701 2650956..2651867 1 NC_009049.1 PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: rsp:RSP_0854 predicted ornithine cyclodeaminase; ornithine cyclodeaminase 2651867 4896701 Rsph17029_2513 Rhodobacter sphaeroides ATCC 17029 ornithine cyclodeaminase YP_001044387.1 2650956 D 349101 CDS YP_001044388.1 126463274 4895082 complement(2651872..2652516) 1 NC_009049.1 KEGG: rsp:RSP_0855 hypothetical protein; hypothetical protein 2652516 4895082 Rsph17029_2514 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044388.1 2651872 R 349101 CDS YP_001044389.1 126463275 4897698 2652895..2654139 1 NC_009049.1 KEGG: rsp:RSP_0856 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase 2654139 4897698 Rsph17029_2515 Rhodobacter sphaeroides ATCC 17029 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase YP_001044389.1 2652895 D 349101 CDS YP_001044390.1 126463276 4897634 2654136..2654768 1 NC_009049.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0857 S-adenosylmethionine-diacylgycerolhomoserine-N- methlytransferase; type 11 methyltransferase 2654768 4897634 Rsph17029_2516 Rhodobacter sphaeroides ATCC 17029 type 11 methyltransferase YP_001044390.1 2654136 D 349101 CDS YP_001044391.1 126463277 4895923 complement(2655174..2656127) 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0858 putative transporter, RhaT family, DMT superfamily; hypothetical protein 2656127 4895923 Rsph17029_2517 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044391.1 2655174 R 349101 CDS YP_001044392.1 126463278 4895083 complement(2656490..2657599) 1 NC_009049.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2657599 4895083 Rsph17029_2518 Rhodobacter sphaeroides ATCC 17029 3-isopropylmalate dehydrogenase YP_001044392.1 2656490 R 349101 CDS YP_001044393.1 126463279 4895150 complement(2657696..2658625) 1 NC_009049.1 KEGG: rsp:RSP_0860 hypothetical protein; hypothetical protein 2658625 4895150 Rsph17029_2519 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044393.1 2657696 R 349101 CDS YP_001044394.1 126463280 4897303 complement(2658712..2659548) 1 NC_009049.1 KEGG: rsp:RSP_0861 putative transmembrane hypothetical protein; hypothetical protein 2659548 4897303 Rsph17029_2520 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044394.1 2658712 R 349101 CDS YP_001044395.1 126463281 4895111 complement(2659787..2660392) 1 NC_009049.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2660392 leuD 4895111 leuD Rhodobacter sphaeroides ATCC 17029 isopropylmalate isomerase small subunit YP_001044395.1 2659787 R 349101 CDS YP_001044396.1 126463282 4895728 complement(2660396..2660920) 1 NC_009049.1 KEGG: rsp:RSP_6139 hypothetical protein; hypothetical protein 2660920 4895728 Rsph17029_2522 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044396.1 2660396 R 349101 CDS YP_001044397.1 126463283 4896667 complement(2660984..2662411) 1 NC_009049.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2662411 4896667 Rsph17029_2523 Rhodobacter sphaeroides ATCC 17029 isopropylmalate isomerase large subunit YP_001044397.1 2660984 R 349101 CDS YP_001044398.1 126463284 4897426 2662658..2663197 1 NC_009049.1 PFAM: SOUL heme-binding protein; KEGG: rsp:RSP_0864 putative heme-binding hypothetical protein; SOUL heme-binding protein 2663197 4897426 Rsph17029_2524 Rhodobacter sphaeroides ATCC 17029 SOUL heme-binding protein YP_001044398.1 2662658 D 349101 CDS YP_001044399.1 126463285 4895185 2663410..2663730 1 NC_009049.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rsp:RSP_0865 hypothetical protein; iojap family protein 2663730 4895185 Rsph17029_2525 Rhodobacter sphaeroides ATCC 17029 iojap family protein YP_001044399.1 2663410 D 349101 CDS YP_001044400.1 126463286 4895191 2663730..2664197 1 NC_009049.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2664197 4895191 Rsph17029_2526 Rhodobacter sphaeroides ATCC 17029 rRNA large subunit methyltransferase YP_001044400.1 2663730 D 349101 CDS YP_001044401.1 126463287 4895459 2664298..2664753 1 NC_009049.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2664753 rnhA 4895459 rnhA Rhodobacter sphaeroides ATCC 17029 ribonuclease H YP_001044401.1 2664298 D 349101 CDS YP_001044402.1 126463288 4895270 2664786..2665277 1 NC_009049.1 KEGG: rsp:RSP_0868 putative transcriptional regulator; putative transcriptional regulator 2665277 4895270 Rsph17029_2528 Rhodobacter sphaeroides ATCC 17029 putative transcriptional regulator YP_001044402.1 2664786 D 349101 CDS YP_001044403.1 126463289 4895222 2665516..2665878 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_0869 response regulator receive protein; response regulator receiver protein 2665878 4895222 Rsph17029_2529 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001044403.1 2665516 D 349101 CDS YP_001044404.1 126463290 4896017 2665990..2666340 1 NC_009049.1 KEGG: rsp:RSP_0870 hypothetical protein; hypothetical protein 2666340 4896017 Rsph17029_2530 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044404.1 2665990 D 349101 CDS YP_001044405.1 126463291 4895308 complement(2666347..2667519) 1 NC_009049.1 PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_0871 putative aminotransferase; class I and II aminotransferase 2667519 4895308 Rsph17029_2531 Rhodobacter sphaeroides ATCC 17029 class I and II aminotransferase YP_001044405.1 2666347 R 349101 CDS YP_001044406.1 126463292 4895370 2667660..2668193 1 NC_009049.1 KEGG: rsp:RSP_0872 formylmethionine deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 2668193 4895370 Rsph17029_2532 Rhodobacter sphaeroides ATCC 17029 peptide deformylase YP_001044406.1 2667660 D 349101 CDS YP_001044407.1 126463293 4895394 2668193..2668684 1 NC_009049.1 KEGG: rsp:RSP_0873 N-formylmethionyl tRNA deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 2668684 4895394 Rsph17029_2533 Rhodobacter sphaeroides ATCC 17029 peptide deformylase YP_001044407.1 2668193 D 349101 CDS YP_001044408.1 126463294 4895431 2668681..2669184 1 NC_009049.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: rsp:RSP_0874 formylmethionine deformylase; peptide deformylase 2669184 4895431 Rsph17029_2534 Rhodobacter sphaeroides ATCC 17029 peptide deformylase YP_001044408.1 2668681 D 349101 CDS YP_001044409.1 126463295 4895430 2669187..2670095 1 NC_009049.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: rsp:RSP_0875 methionyl-tRNA formyl transferase; methionyl-tRNA formyltransferase 2670095 4895430 Rsph17029_2535 Rhodobacter sphaeroides ATCC 17029 methionyl-tRNA formyltransferase YP_001044409.1 2669187 D 349101 CDS YP_001044410.1 126463296 4895432 complement(2670188..2673700) 1 NC_009049.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rsp:RSP_0876 chromosome segregation protein SMC2; chromosome segregation protein SMC 2673700 4895432 Rsph17029_2536 Rhodobacter sphaeroides ATCC 17029 chromosome segregation protein SMC YP_001044410.1 2670188 R 349101 CDS YP_001044411.1 126463297 4895428 2673781..2674266 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0878 putative acetyltransferase protein; N-acetyltransferase GCN5 2674266 4895428 Rsph17029_2537 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044411.1 2673781 D 349101 CDS YP_001044412.1 126463298 4895648 complement(2674217..2675101) 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0877 putative transporter, RhaT family, DMT superfamily; hypothetical protein 2675101 4895648 Rsph17029_2538 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044412.1 2674217 R 349101 CDS YP_001044413.1 126463299 4897649 complement(2675098..2675898) 1 NC_009049.1 PFAM: protein of unknown function DUF752; KEGG: rsp:RSP_0879 hypothetical protein; hypothetical protein 2675898 4897649 Rsph17029_2539 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044413.1 2675098 R 349101 CDS YP_001044414.1 126463300 4897330 2675953..2677014 1 NC_009049.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0880 putative oxidoreductase, possibly D-amino acid oxidase protein; FAD dependent oxidoreductase 2677014 4897330 Rsph17029_2540 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001044414.1 2675953 D 349101 CDS YP_001044415.1 126463301 4895540 complement(2677310..2679343) 1 NC_009049.1 PFAM: Lytic transglycosylase, catalytic; Tetratricopeptide TPR_4; KEGG: rsp:RSP_0881 putative soluble lytic transglycosylase; lytic transglycosylase, catalytic 2679343 4895540 Rsph17029_2541 Rhodobacter sphaeroides ATCC 17029 lytic transglycosylase, catalytic YP_001044415.1 2677310 R 349101 CDS YP_001044416.1 126463302 4895643 2679424..2680296 1 NC_009049.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2680296 4895643 Rsph17029_2542 Rhodobacter sphaeroides ATCC 17029 dihydrodipicolinate synthase YP_001044416.1 2679424 D 349101 CDS YP_001044417.1 126463303 4896037 2680557..2681030 1 NC_009049.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2681030 smpB 4896037 smpB Rhodobacter sphaeroides ATCC 17029 SsrA-binding protein YP_001044417.1 2680557 D 349101 CDS YP_001044418.1 126463304 4895646 2681316..2682164 1 NC_009049.1 PFAM: Rhodanese domain protein; KEGG: rsp:RSP_0885 thiosulfate sulfurtransferase, rhodanese-like; 3-mercaptopyruvate sulfurtransferase 2682164 4895646 Rsph17029_2544 Rhodobacter sphaeroides ATCC 17029 3-mercaptopyruvate sulfurtransferase YP_001044418.1 2681316 D 349101 CDS YP_001044419.1 126463305 4895668 2682136..2683356 1 NC_009049.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2683356 4895668 Rsph17029_2545 Rhodobacter sphaeroides ATCC 17029 aromatic amino acid aminotransferase YP_001044419.1 2682136 D 349101 CDS YP_001044420.1 126463306 4895690 complement(2683542..2684894) 1 NC_009049.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rsp:RSP_0888 ammonium transporter, AmtB; ammonium transporter 2684894 4895690 Rsph17029_2546 Rhodobacter sphaeroides ATCC 17029 ammonium transporter YP_001044420.1 2683542 R 349101 CDS YP_001044421.1 126463307 4897969 complement(2684921..2685259) 1 NC_009049.1 PFAM: nitrogen regulatory protein P-II; KEGG: rsp:RSP_0889 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2685259 4897969 Rsph17029_2547 Rhodobacter sphaeroides ATCC 17029 nitrogen regulatory protein P-II YP_001044421.1 2684921 R 349101 CDS YP_001044422.1 126463308 4895721 2685421..2687787 1 NC_009049.1 KEGG: rsp:RSP_0887 glycosyl transferase, family 51; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 2687787 4895721 Rsph17029_2548 Rhodobacter sphaeroides ATCC 17029 1A family penicillin-binding protein YP_001044422.1 2685421 D 349101 CDS YP_001044423.1 126463309 4895722 complement(2687964..2688587) 1 NC_009049.1 PFAM: toluene tolerance family protein; KEGG: rsp:RSP_0890 possible protein YrbC precursor; toluene tolerance family protein 2688587 4895722 Rsph17029_2549 Rhodobacter sphaeroides ATCC 17029 toluene tolerance family protein YP_001044423.1 2687964 R 349101 CDS YP_001044424.1 126463310 4897415 complement(2688577..2689365) 1 NC_009049.1 PFAM: VacJ family lipoprotein; KEGG: rsp:RSP_0891 putative lipoprotein; VacJ family lipoprotein 2689365 4897415 Rsph17029_2550 Rhodobacter sphaeroides ATCC 17029 VacJ family lipoprotein YP_001044424.1 2688577 R 349101 CDS YP_001044425.1 126463311 4895822 2689575..2691311 1 NC_009049.1 KEGG: rsp:RSP_0892 ABC protein toxin exporter, fused ATPase and inner membrane domain; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 2691311 4895822 Rsph17029_2551 Rhodobacter sphaeroides ATCC 17029 type I secretion system ATPase YP_001044425.1 2689575 D 349101 CDS YP_001044426.1 126463312 4895881 2691308..2692609 1 NC_009049.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_0893 RTX secretion protein D, HlyD family; HlyD family type I secretion membrane fusion protein 2692609 4895881 Rsph17029_2552 Rhodobacter sphaeroides ATCC 17029 HlyD family type I secretion membrane fusion protein YP_001044426.1 2691308 D 349101 CDS YP_001044427.1 126463313 4897424 2692733..2693191 1 NC_009049.1 PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_0894 hypothetical protein; endoribonuclease L-PSP 2693191 4897424 Rsph17029_2553 Rhodobacter sphaeroides ATCC 17029 endoribonuclease L-PSP YP_001044427.1 2692733 D 349101 CDS YP_001044428.1 126463314 4895941 2693191..2693961 1 NC_009049.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rsp:RSP_0895 phosphodiesterase-like; glycerophosphoryl diester phosphodiesterase 2693961 4895941 Rsph17029_2554 Rhodobacter sphaeroides ATCC 17029 glycerophosphoryl diester phosphodiesterase YP_001044428.1 2693191 D 349101 CDS YP_001044429.1 126463315 4895936 2694031..2695275 1 NC_009049.1 PFAM: protein of unknown function DUF482; KEGG: rsp:RSP_0896 hypothetical protein; hypothetical protein 2695275 4895936 Rsph17029_2555 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044429.1 2694031 D 349101 CDS YP_001044430.1 126463316 4895955 2695272..2695904 1 NC_009049.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_0897 glutathione S-transferase; glutathione S-transferase domain-containing protein 2695904 4895955 Rsph17029_2556 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase domain-containing protein YP_001044430.1 2695272 D 349101 CDS YP_001044431.1 126463317 4895984 2695897..2696175 1 NC_009049.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rsp:RSP_0898 pterin dehydratase; transcriptional coactivator/pterin dehydratase 2696175 4895984 Rsph17029_2557 Rhodobacter sphaeroides ATCC 17029 transcriptional coactivator/pterin dehydratase YP_001044431.1 2695897 D 349101 CDS YP_001044432.1 126463318 4895970 complement(2696329..2696817) 1 NC_009049.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_0899 AhpC/TSA family protein; redoxin domain-containing protein 2696817 4895970 Rsph17029_2558 Rhodobacter sphaeroides ATCC 17029 redoxin domain-containing protein YP_001044432.1 2696329 R 349101 CDS YP_001044433.1 126463319 4895988 2696918..2698123 1 NC_009049.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_0900 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2698123 4895988 Rsph17029_2559 Rhodobacter sphaeroides ATCC 17029 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001044433.1 2696918 D 349101 CDS YP_001044434.1 126463320 4895991 2698120..2698674 1 NC_009049.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: rsp:RSP_0901 N-6 adenine-specific DNA methylase; putative methyltransferase 2698674 4895991 Rsph17029_2560 Rhodobacter sphaeroides ATCC 17029 putative methyltransferase YP_001044434.1 2698120 D 349101 CDS YP_001044435.1 126463321 4897397 2698671..2699315 1 NC_009049.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0902 hydrolase, haloacid dehalogenase-like hydrolase; HAD family hydrolase 2699315 4897397 Rsph17029_2561 Rhodobacter sphaeroides ATCC 17029 HAD family hydrolase YP_001044435.1 2698671 D 349101 CDS YP_001044436.1 126463322 4897519 2699388..2700467 1 NC_009049.1 KEGG: rsp:RSP_0903 catalase; catalase 2700467 4897519 Rsph17029_2562 Rhodobacter sphaeroides ATCC 17029 catalase YP_001044436.1 2699388 D 349101 CDS YP_001044437.1 126463323 4896155 2700550..2701443 1 NC_009049.1 PFAM: periplasmic solute binding protein; KEGG: rsp:RSP_0904 ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA; periplasmic solute binding protein 2701443 4896155 Rsph17029_2563 Rhodobacter sphaeroides ATCC 17029 periplasmic solute binding protein YP_001044437.1 2700550 D 349101 CDS YP_001044438.1 126463324 4896301 2701440..2702333 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0905 ABC Mn+2/Fe+2 transporter, ATPase subunit SitB; ABC transporter 2702333 4896301 Rsph17029_2564 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044438.1 2701440 D 349101 CDS YP_001044439.1 126463325 4896675 2702320..2703180 1 NC_009049.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: rsp:RSP_0906 ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC; ABC-3 protein 2703180 4896675 Rsph17029_2565 Rhodobacter sphaeroides ATCC 17029 ABC-3 protein YP_001044439.1 2702320 D 349101 CDS YP_001044440.1 126463326 4897335 2703177..2704025 1 NC_009049.1 PFAM: ABC-3 protein; KEGG: rsp:RSP_0908 ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD; ABC-3 protein 2704025 4897335 Rsph17029_2566 Rhodobacter sphaeroides ATCC 17029 ABC-3 protein YP_001044440.1 2703177 D 349101 CDS YP_001044441.1 126463327 4896221 complement(2704000..2704608) 1 NC_009049.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rsp:RSP_0907 two component transcriptional regulator, LuxR family; response regulator receiver protein 2704608 4896221 Rsph17029_2567 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001044441.1 2704000 R 349101 CDS YP_001044442.1 126463328 4897509 complement(2704605..2706590) 1 NC_009049.1 KEGG: rsp:RSP_0909 multisensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 2706590 4897509 Rsph17029_2568 Rhodobacter sphaeroides ATCC 17029 multi-sensor signal transduction histidine kinase YP_001044442.1 2704605 R 349101 CDS YP_001044443.1 126463329 4895814 2706730..2707734 1 NC_009049.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0910 TRAP-T family transporter, C4-dicarboxylate-binding protein DctP; TRAP dicarboxylate transporter subunit DctP 2707734 4895814 Rsph17029_2569 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctP YP_001044443.1 2706730 D 349101 CDS YP_001044444.1 126463330 4896342 2707820..2708503 1 NC_009049.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0911 TRAP-T family C4-dicarboxylate transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ 2708503 4896342 Rsph17029_2570 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001044444.1 2707820 D 349101 CDS YP_001044445.1 126463331 4896362 2708505..2709830 1 NC_009049.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_0912 TRAP-T family C4-dicarboxylate transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM 2709830 4896362 Rsph17029_2571 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001044445.1 2708505 D 349101 CDS YP_001044446.1 126463332 4897789 complement(2709958..2710578) 1 NC_009049.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rsp:RSP_0913 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2710578 4897789 Rsph17029_2572 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase/isomerase YP_001044446.1 2709958 R 349101 CDS YP_001044447.1 126463333 4897386 complement(2710575..2711327) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0914 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2711327 4897386 Rsph17029_2573 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001044447.1 2710575 R 349101 CDS YP_001044448.1 126463334 4897480 2711451..2712980 1 NC_009049.1 KEGG: rsp:RSP_0915 hypothetical protein; hypothetical protein 2712980 4897480 Rsph17029_2574 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044448.1 2711451 D 349101 CDS YP_001044449.1 126463335 4897261 2713251..2714594 1 NC_009049.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rsp:RSP_0916 putative PmbA/TldD protein invoved in modulation of DNA gyrase; C69 family peptidase 2714594 4897261 Rsph17029_2575 Rhodobacter sphaeroides ATCC 17029 C69 family peptidase YP_001044449.1 2713251 D 349101 CDS YP_001044450.1 126463336 4896556 2714581..2715357 1 NC_009049.1 PFAM: inositol monophosphatase; KEGG: rsp:RSP_0917 inositol monophosphatase; inositol monophosphatase 2715357 4896556 Rsph17029_2576 Rhodobacter sphaeroides ATCC 17029 inositol monophosphatase YP_001044450.1 2714581 D 349101 CDS YP_001044451.1 126463337 4896553 complement(2715605..2715802) 1 NC_009049.1 KEGG: rsp:RSP_0918 hypothetical protein; hypothetical protein 2715802 4896553 Rsph17029_2577 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044451.1 2715605 R 349101 CDS YP_001044452.1 126463338 4897125 2715952..2716809 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0919 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2716809 4897125 Rsph17029_2578 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001044452.1 2715952 D 349101 CDS YP_001044453.1 126463339 4896576 2717073..2718164 1 NC_009049.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rsp:RSP_0920 biopolymer transport protein, ExbB; MotA/TolQ/ExbB proton channel 2718164 4896576 Rsph17029_2579 Rhodobacter sphaeroides ATCC 17029 MotA/TolQ/ExbB proton channel YP_001044453.1 2717073 D 349101 CDS YP_001044454.1 126463340 4897666 2718168..2718593 1 NC_009049.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rsp:RSP_0921 biopolymer transport protein, ExbD; biopolymer transport protein ExbD/TolR 2718593 4897666 Rsph17029_2580 Rhodobacter sphaeroides ATCC 17029 biopolymer transport protein ExbD/TolR YP_001044454.1 2718168 D 349101 CDS YP_001044455.1 126463341 4897402 2718590..2719474 1 NC_009049.1 TIGRFAM: TonB family protein; KEGG: rsp:RSP_0922 putative TonB protein; TonB family protein 2719474 4897402 Rsph17029_2581 Rhodobacter sphaeroides ATCC 17029 TonB family protein YP_001044455.1 2718590 D 349101 CDS YP_001044456.1 126463342 4896961 complement(2719668..2720549) 1 NC_009049.1 KEGG: rsp:RSP_0923 methionine aminopeptidase, subfamily 1; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 2720549 4896961 Rsph17029_2582 Rhodobacter sphaeroides ATCC 17029 methionine aminopeptidase YP_001044456.1 2719668 R 349101 CDS YP_001044457.1 126463343 4896656 2720624..2721355 1 NC_009049.1 PFAM: molybdopterin binding domain; KEGG: rsp:RSP_0924 predicted nucleotide-utilizing enzyme/competence-damage associated protein; molybdopterin binding domain-containing protein 2721355 4896656 Rsph17029_2583 Rhodobacter sphaeroides ATCC 17029 molybdopterin binding domain-containing protein YP_001044457.1 2720624 D 349101 CDS YP_001044458.1 126463344 4896778 2721359..2722069 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0925 putative acetyl transferase; N-acetyltransferase GCN5 2722069 4896778 Rsph17029_2584 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044458.1 2721359 D 349101 CDS YP_001044459.1 126463345 4896696 2722066..2722998 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_0926 OmpA/MotB family protein; OmpA/MotB domain-containing protein 2722998 4896696 Rsph17029_2585 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001044459.1 2722066 D 349101 CDS YP_001044460.1 126463346 4897194 complement(2723021..2723926) 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_0927 transcriptional regulator, LyrR family; LysR family transcriptional regulator 2723926 4897194 Rsph17029_2586 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044460.1 2723021 R 349101 CDS YP_001044461.1 126463347 4896818 complement(2724552..2725076) 1 NC_009049.1 KEGG: rsp:RSP_0928 hypothetical protein; hypothetical protein 2725076 4896818 Rsph17029_2587 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044461.1 2724552 R 349101 CDS YP_001044462.1 126463348 4897212 2725463..2726416 1 NC_009049.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rsp:RSP_0929 acetyl-CoA carboxylase carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 2726416 4897212 Rsph17029_2588 Rhodobacter sphaeroides ATCC 17029 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001044462.1 2725463 D 349101 CDS YP_001044463.1 126463349 4896753 2726413..2727687 1 NC_009049.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rsp:RSP_0930 folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 2727687 4896753 Rsph17029_2589 Rhodobacter sphaeroides ATCC 17029 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_001044463.1 2726413 D 349101 CDS YP_001044464.1 126463350 4896817 complement(2727822..2728310) 1 NC_009049.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 2728310 4896817 Rsph17029_2590 Rhodobacter sphaeroides ATCC 17029 dinucleoside polyphosphate hydrolase YP_001044464.1 2727822 R 349101 CDS YP_001044465.1 126463351 4897635 complement(2728318..2729664) 1 NC_009049.1 KEGG: rsp:RSP_0932 peptidase family S41; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 2729664 4897635 Rsph17029_2591 Rhodobacter sphaeroides ATCC 17029 carboxyl-terminal protease YP_001044465.1 2728318 R 349101 CDS YP_001044466.1 126463352 4897619 complement(2729672..2730784) 1 NC_009049.1 PFAM: peptidase M23B; KEGG: rsp:RSP_0933 hypothetical protein; peptidase M23B 2730784 4897619 Rsph17029_2592 Rhodobacter sphaeroides ATCC 17029 peptidase M23B YP_001044466.1 2729672 R 349101 CDS YP_001044467.1 126463353 4897600 complement(2730781..2732301) 1 NC_009049.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 2732301 4897600 Rsph17029_2593 Rhodobacter sphaeroides ATCC 17029 phosphoglyceromutase YP_001044467.1 2730781 R 349101 CDS YP_001044468.1 126463354 4897435 complement(2732332..2733609) 1 NC_009049.1 KEGG: rsp:RSP_0935 MiaB-like radical SAM protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme 2733609 4897435 Rsph17029_2594 Rhodobacter sphaeroides ATCC 17029 MiaB-like tRNA modifying enzyme YP_001044468.1 2732332 R 349101 CDS YP_001044469.1 126463355 4896899 complement(2733606..2734442) 1 NC_009049.1 PFAM: diaminopimelate epimerase; KEGG: rsp:RSP_0936 diaminopimelate epimerase; diaminopimelate epimerase 2734442 4896899 Rsph17029_2595 Rhodobacter sphaeroides ATCC 17029 diaminopimelate epimerase YP_001044469.1 2733606 R 349101 CDS YP_001044470.1 126463356 4895113 2734813..2736489 1 NC_009049.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rsp:RSP_0937 alpha amylase, catalytic subdomain; alpha amylase 2736489 4895113 Rsph17029_2596 Rhodobacter sphaeroides ATCC 17029 alpha amylase YP_001044470.1 2734813 D 349101 CDS YP_001044471.1 126463357 4896917 2736583..2736810 1 NC_009049.1 KEGG: rsp:RSP_0938 hypothetical protein; hypothetical protein 2736810 4896917 Rsph17029_2597 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044471.1 2736583 D 349101 CDS YP_001044472.1 126463358 4896976 2736978..2737787 1 NC_009049.1 PFAM: protein of unknown function DUF72; KEGG: rsp:RSP_0939 hypothetical protein; hypothetical protein 2737787 4896976 Rsph17029_2598 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044472.1 2736978 D 349101 CDS YP_001044473.1 126463359 4897943 2737936..2738943 1 NC_009049.1 KEGG: rsp:RSP_0940 ABC transporter, periplasmic substrate binding protein; ABC transporter substrate-binding protein 2738943 4897943 Rsph17029_2599 Rhodobacter sphaeroides ATCC 17029 ABC transporter substrate-binding protein YP_001044473.1 2737936 D 349101 CDS YP_001044474.1 126463360 4897043 2739001..2739897 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0941 ABC transporter, ATPase subunit; ABC transporter 2739897 4897043 Rsph17029_2600 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044474.1 2739001 D 349101 CDS YP_001044475.1 126463361 4897039 2739897..2740661 1 NC_009049.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0942 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2740661 4897039 Rsph17029_2601 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001044475.1 2739897 D 349101 CDS YP_001044476.1 126463362 4897112 2740773..2742152 1 NC_009049.1 PFAM: aminotransferase class-III; KEGG: rsp:RSP_0943 probable adenosylmethionine-8-amino-7-oxononanoate aminotransferase; class III aminotransferase 2742152 4897112 Rsph17029_2602 Rhodobacter sphaeroides ATCC 17029 class III aminotransferase YP_001044476.1 2740773 D 349101 CDS YP_001044477.1 126463363 4897699 2742471..2743355 1 NC_009049.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2743355 purU 4897699 purU Rhodobacter sphaeroides ATCC 17029 formyltetrahydrofolate deformylase YP_001044477.1 2742471 D 349101 CDS YP_001044478.1 126463364 4897137 complement(2743426..2745051) 1 NC_009049.1 PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0945 major facilitator superfamily (MFS) transporter; hypothetical protein 2745051 4897137 Rsph17029_2604 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044478.1 2743426 R 349101 CDS YP_001044479.1 126463365 4897136 2745378..2746385 1 NC_009049.1 KEGG: rsp:RSP_0946 putative DNA topoisomerase I protein; putative DNA topoisomerase I protein 2746385 4897136 Rsph17029_2605 Rhodobacter sphaeroides ATCC 17029 putative DNA topoisomerase I protein YP_001044479.1 2745378 D 349101 CDS YP_001044480.1 126463366 4897164 complement(2746520..2746705) 1 NC_009049.1 KEGG: rsp:RSP_0947 hypothetical protein; hypothetical protein 2746705 4897164 Rsph17029_2606 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044480.1 2746520 R 349101 CDS YP_001044481.1 126463367 4897813 2746961..2747485 1 NC_009049.1 KEGG: rsp:RSP_6141 hypothetical outer membrane protein; outer membrane protein 2747485 4897813 Rsph17029_2607 Rhodobacter sphaeroides ATCC 17029 outer membrane protein YP_001044481.1 2746961 D 349101 CDS YP_001044482.1 126463368 4897190 complement(2747538..2748950) 1 NC_009049.1 KEGG: rsp:RSP_0948 probable OtsA trehalose-6-phosphate synthase; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase, family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) 2748950 4897190 Rsph17029_2608 Rhodobacter sphaeroides ATCC 17029 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_001044482.1 2747538 R 349101 CDS YP_001044483.1 126463369 4897229 complement(2748947..2749729) 1 NC_009049.1 KEGG: rsp:RSP_0949 putative trehalose-6-phosphate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase 2749729 4897229 Rsph17029_2609 Rhodobacter sphaeroides ATCC 17029 HAD family hydrolase YP_001044483.1 2748947 R 349101 CDS YP_001044484.1 126463370 4897217 complement(2749899..2751509) 1 NC_009049.1 PFAM: peptidase M20; KEGG: rsp:RSP_0950 arginine utilization protein RocB; peptidase M20 2751509 4897217 Rsph17029_2610 Rhodobacter sphaeroides ATCC 17029 peptidase M20 YP_001044484.1 2749899 R 349101 CDS YP_001044485.1 126463371 4897239 complement(2751855..2752076) 1 NC_009049.1 KEGG: rsp:RSP_0951 hypothetical protein; hypothetical protein 2752076 4897239 Rsph17029_2611 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044485.1 2751855 R 349101 CDS YP_001044486.1 126463372 4897294 complement(2752108..2752992) 1 NC_009049.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rsp:RSP_0952 transglutaminase-like protein; transglutaminase domain-containing protein 2752992 4897294 Rsph17029_2612 Rhodobacter sphaeroides ATCC 17029 transglutaminase domain-containing protein YP_001044486.1 2752108 R 349101 CDS YP_001044487.1 126463373 4897578 complement(2752993..2755377) 1 NC_009049.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rsp:RSP_0953 hypothetical protein; hypothetical protein 2755377 4897578 Rsph17029_2613 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044487.1 2752993 R 349101 CDS YP_001044488.1 126463374 4897377 complement(2755377..2758700) 1 NC_009049.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rsp:RSP_0954 transglutaminase-like domain; transglutaminase domain-containing protein 2758700 4897377 Rsph17029_2614 Rhodobacter sphaeroides ATCC 17029 transglutaminase domain-containing protein YP_001044488.1 2755377 R 349101 CDS YP_001044489.1 126463375 4897359 complement(2758923..2760494) 1 NC_009049.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rsp:RSP_0955 5'-nucleotidase; 5'-nucleotidase domain-containing protein 2760494 4897359 Rsph17029_2615 Rhodobacter sphaeroides ATCC 17029 5'-nucleotidase domain-containing protein YP_001044489.1 2758923 R 349101 CDS YP_001044490.1 126463376 4897438 2760653..2760991 1 NC_009049.1 PFAM: protein of unknown function DUF952; KEGG: rsp:RSP_0956 hypothetical protein; hypothetical protein 2760991 4897438 Rsph17029_2616 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044490.1 2760653 D 349101 CDS YP_001044491.1 126463377 4897375 2760988..2762052 1 NC_009049.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2762052 4897375 Rsph17029_2617 Rhodobacter sphaeroides ATCC 17029 dihydroorotate dehydrogenase 2 YP_001044491.1 2760988 D 349101 CDS YP_001044492.1 126463378 4897371 complement(2762227..2762463) 1 NC_009049.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_0958 RAM domain protein; AsnC family transcriptional regulator 2762463 4897371 Rsph17029_2618 Rhodobacter sphaeroides ATCC 17029 AsnC family transcriptional regulator YP_001044492.1 2762227 R 349101 CDS YP_001044493.1 126463379 4897389 complement(2762757..2764457) 1 NC_009049.1 SMART: AAA ATPase; KEGG: rsp:RSP_0959 ATPase; ATPase AAA 2764457 4897389 Rsph17029_2619 Rhodobacter sphaeroides ATCC 17029 ATPase AAA YP_001044493.1 2762757 R 349101 CDS YP_001044494.1 126463380 4897380 complement(2764674..2765966) 1 NC_009049.1 TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0960 alcohol dehydrogenase; crotonyl-CoA reductase 2765966 4897380 Rsph17029_2620 Rhodobacter sphaeroides ATCC 17029 crotonyl-CoA reductase YP_001044494.1 2764674 R 349101 CDS YP_001044495.1 126463381 4897420 2766338..2768296 1 NC_009049.1 KEGG: rsp:RSP_0961 similiar to methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 2768296 4897420 Rsph17029_2621 Rhodobacter sphaeroides ATCC 17029 methylmalonyl-CoA mutase large subunit YP_001044495.1 2766338 D 349101 CDS YP_001044496.1 126463382 4897434 complement(2768497..2769885) 1 NC_009049.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: rsp:RSP_0962 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2769885 4897434 Rsph17029_2622 Rhodobacter sphaeroides ATCC 17029 dihydrolipoamide dehydrogenase YP_001044496.1 2768497 R 349101 CDS YP_001044497.1 126463383 4897414 complement(2770000..2770395) 1 NC_009049.1 KEGG: rsp:RSP_0963 inner membrane protein; inner membrane protein 2770395 4897414 Rsph17029_2623 Rhodobacter sphaeroides ATCC 17029 inner membrane protein YP_001044497.1 2770000 R 349101 CDS YP_001044498.1 126463384 4897462 complement(2770451..2771980) 1 NC_009049.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rsp:RSP_0964 dihydrolipoamide acetyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2771980 4897462 Rsph17029_2624 Rhodobacter sphaeroides ATCC 17029 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001044498.1 2770451 R 349101 CDS YP_001044499.1 126463385 4897461 complement(2771983..2774946) 1 NC_009049.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2774946 sucA 4897461 sucA Rhodobacter sphaeroides ATCC 17029 2-oxoglutarate dehydrogenase E1 component YP_001044499.1 2771983 R 349101 CDS YP_001044500.1 126463386 4897466 complement(2775001..2775885) 1 NC_009049.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rsp:RSP_0966 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 2775885 4897466 Rsph17029_2626 Rhodobacter sphaeroides ATCC 17029 succinyl-CoA synthetase subunit alpha YP_001044500.1 2775001 R 349101 CDS YP_001044501.1 126463387 4897491 complement(2775890..2777083) 1 NC_009049.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2777083 sucC 4897491 sucC Rhodobacter sphaeroides ATCC 17029 succinyl-CoA synthetase subunit beta YP_001044501.1 2775890 R 349101 CDS YP_001044502.1 126463388 4897511 complement(2777313..2778275) 1 NC_009049.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 2778275 4897511 Rsph17029_2628 Rhodobacter sphaeroides ATCC 17029 malate dehydrogenase YP_001044502.1 2777313 R 349101 CDS YP_001044503.1 126463389 4897545 2778478..2779215 1 NC_009049.1 PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_0969 putative integral membrane protein; hypothetical protein 2779215 4897545 Rsph17029_2629 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044503.1 2778478 D 349101 CDS YP_001044504.1 126463390 4897538 2779302..2780159 1 NC_009049.1 PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_0970 putative citrate lyase beta chain; citrate (pro-3S)-lyase 2780159 4897538 Rsph17029_2630 Rhodobacter sphaeroides ATCC 17029 citrate (pro-3S)-lyase YP_001044504.1 2779302 D 349101 CDS YP_001044505.1 126463391 4897590 2780168..2780722 1 NC_009049.1 PFAM: NnrUfamily protein; KEGG: rsp:RSP_0971 hypothetical protein; NnrU family protein 2780722 4897590 Rsph17029_2631 Rhodobacter sphaeroides ATCC 17029 NnrU family protein YP_001044505.1 2780168 D 349101 CDS YP_001044506.1 126463392 4897544 2780719..2780922 1 NC_009049.1 KEGG: rsp:RSP_0972 hypothetical protein; hypothetical protein 2780922 4897544 Rsph17029_2632 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044506.1 2780719 D 349101 CDS YP_001044507.1 126463393 4897605 2780923..2781954 1 NC_009049.1 PFAM: MaoC domain protein dehydratase; KEGG: rsp:RSP_0973 MaoC family protein; dehydratase 2781954 4897605 Rsph17029_2633 Rhodobacter sphaeroides ATCC 17029 dehydratase YP_001044507.1 2780923 D 349101 CDS YP_001044508.1 126463394 4897612 2782165..2782548 1 NC_009049.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rsp:RSP_0974 succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase, cytochrome b subunit 2782548 4897612 Rsph17029_2634 Rhodobacter sphaeroides ATCC 17029 succinate dehydrogenase, cytochrome b subunit YP_001044508.1 2782165 D 349101 CDS YP_001044509.1 126463395 4897615 2782560..2782931 1 NC_009049.1 KEGG: rsp:RSP_0975 putative succinate dehydrogenase, hydrophobic membrane anchor protein; putative succinate dehydrogenase, hydrophobic membrane anchor protein 2782931 4897615 Rsph17029_2635 Rhodobacter sphaeroides ATCC 17029 putative succinate dehydrogenase, hydrophobic membrane anchor protein YP_001044509.1 2782560 D 349101 CDS YP_001044510.1 126463396 4897670 2782943..2784745 1 NC_009049.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2784745 sdhA 4897670 sdhA Rhodobacter sphaeroides ATCC 17029 succinate dehydrogenase flavoprotein subunit YP_001044510.1 2782943 D 349101 CDS YP_001044511.1 126463397 4897667 2784745..2785065 1 NC_009049.1 KEGG: rsp:RSP_0977 hypothetical protein; hypothetical protein 2785065 4897667 Rsph17029_2637 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044511.1 2784745 D 349101 CDS YP_001044512.1 126463398 4897695 2785069..2785347 1 NC_009049.1 KEGG: rsp:RSP_0978 hypothetical protein; hypothetical protein 2785347 4897695 Rsph17029_2638 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044512.1 2785069 D 349101 CDS YP_001044513.1 126463399 4897534 2785366..2786145 1 NC_009049.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2786145 sdhB 4897534 sdhB Rhodobacter sphaeroides ATCC 17029 succinate dehydrogenase iron-sulfur subunit YP_001044513.1 2785366 D 349101 CDS YP_001044514.1 126463400 4896286 complement(2786431..2786793) 1 NC_009049.1 KEGG: rsp:RSP_6142 hypothetical protein; hypothetical protein 2786793 4896286 Rsph17029_2640 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044514.1 2786431 R 349101 CDS YP_001044515.1 126463401 4896396 complement(2786889..2787539) 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_0981 transcriptional regulator, GntR family; GntR family transcriptional regulator 2787539 4896396 Rsph17029_2641 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001044515.1 2786889 R 349101 CDS YP_001044516.1 126463402 4897648 complement(2787572..2788258) 1 NC_009049.1 PFAM: protein of unknown function DUF45; KEGG: rsp:RSP_0982 zinc metallopeptidase-like protein; hypothetical protein 2788258 4897648 Rsph17029_2642 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044516.1 2787572 R 349101 CDS YP_001044517.1 126463403 4895241 2788370..2788750 1 NC_009049.1 KEGG: rsp:RSP_0983 hypothetical protein; hypothetical protein 2788750 4895241 Rsph17029_2643 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044517.1 2788370 D 349101 CDS YP_001044518.1 126463404 4895944 2789207..2789461 1 NC_009049.1 PFAM: 17 kDa surface antigen; KEGG: rsp:RSP_6143 hypothetical protein; 17 kDa surface antigen 2789461 4895944 Rsph17029_2644 Rhodobacter sphaeroides ATCC 17029 17 kDa surface antigen YP_001044518.1 2789207 D 349101 CDS YP_001044519.1 126463405 4896185 complement(2789528..2791225) 1 NC_009049.1 KEGG: rsp:RSP_0985 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; adenine deaminase 2791225 4896185 Rsph17029_2645 Rhodobacter sphaeroides ATCC 17029 adenine deaminase YP_001044519.1 2789528 R 349101 CDS YP_001044520.1 126463406 4897626 2791360..2792316 1 NC_009049.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0987 putative transporter, RarD family, DMT superfamily; hypothetical protein 2792316 4897626 Rsph17029_2646 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044520.1 2791360 D 349101 CDS YP_001044521.1 126463407 4897306 complement(2792313..2792909) 1 NC_009049.1 KEGG: rsp:RSP_0986 hypothetical protein; putative fructose transport system kinase 2792909 frcK 4897306 frcK Rhodobacter sphaeroides ATCC 17029 putative fructose transport system kinase YP_001044521.1 2792313 R 349101 CDS YP_001044522.1 126463408 4896963 complement(2792906..2793682) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0988 ABC sugar transporter, ATPase subunit; ABC transporter 2793682 4896963 Rsph17029_2648 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044522.1 2792906 R 349101 CDS YP_001044523.1 126463409 4895865 complement(2793682..2794773) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_0989 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 2794773 4895865 Rsph17029_2649 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001044523.1 2793682 R 349101 CDS YP_001044524.1 126463410 4896749 complement(2794948..2795970) 1 NC_009049.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_0990 ABC sugar transporter, periplasmic sugar binding subunit; periplasmic binding protein/LacI transcriptional regulator 2795970 4896749 Rsph17029_2650 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001044524.1 2794948 R 349101 CDS YP_001044525.1 126463411 4897243 2796168..2797391 1 NC_009049.1 PFAM: ROK family protein; KEGG: rsp:RSP_0991 putative transcriptional regulator, ROK family; ROK family protein 2797391 4897243 Rsph17029_2651 Rhodobacter sphaeroides ATCC 17029 ROK family protein YP_001044525.1 2796168 D 349101 CDS YP_001044526.1 126463412 4897557 2797516..2800365 1 NC_009049.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 2800365 4897557 Rsph17029_2652 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit A YP_001044526.1 2797516 D 349101 CDS YP_001044527.1 126463413 4897422 2800365..2800700 1 NC_009049.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 2800700 4897422 Rsph17029_2653 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit C YP_001044527.1 2800365 D 349101 CDS YP_001044528.1 126463414 4897608 2800697..2802208 1 NC_009049.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 2802208 4897608 Rsph17029_2654 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit D YP_001044528.1 2800697 D 349101 CDS YP_001044529.1 126463415 4898061 2802205..2802696 1 NC_009049.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 2802696 4898061 Rsph17029_2655 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit E YP_001044529.1 2802205 D 349101 CDS YP_001044530.1 126463416 4898023 2802693..2802962 1 NC_009049.1 PFAM: multiple resistance and pH regulation protein F; KEGG: rsp:RSP_0996 pH adaption potassium efflux system, PhaF subunit; multiple resistance and pH regulation protein F 2802962 4898023 Rsph17029_2656 Rhodobacter sphaeroides ATCC 17029 multiple resistance and pH regulation protein F YP_001044530.1 2802693 D 349101 CDS YP_001044531.1 126463417 4896791 2802968..2803354 1 NC_009049.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rsp:RSP_0997 pH adaption potassium efflux system, PhaG subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2803354 4896791 Rsph17029_2657 Rhodobacter sphaeroides ATCC 17029 monovalent cation/proton antiporter subunit MnhG/PhaG YP_001044531.1 2802968 D 349101 CDS YP_001044532.1 126463418 4897526 2803488..2804786 1 NC_009049.1 PFAM: Citrate transporter; KEGG: rsp:RSP_0998 Na+/H+ antiporter, NhaD; citrate transporter 2804786 4897526 Rsph17029_2658 Rhodobacter sphaeroides ATCC 17029 citrate transporter YP_001044532.1 2803488 D 349101 CDS YP_001044533.1 126463419 4896551 complement(2804836..2805390) 1 NC_009049.1 PFAM: protein of unknown function DUF179; KEGG: rsp:RSP_0999 hypothetical protein; hypothetical protein 2805390 4896551 Rsph17029_2659 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044533.1 2804836 R 349101 CDS YP_001044534.1 126463420 4896245 2805529..2806326 1 NC_009049.1 KEGG: rsp:RSP_1000 hypothetical protein; hypothetical protein 2806326 4896245 Rsph17029_2660 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044534.1 2805529 D 349101 CDS YP_001044535.1 126463421 4898087 complement(2806504..2807286) 1 NC_009049.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rsp:RSP_1001 putative DNA polymerase bacteriophage-type; phage SPO1 DNA polymerase-related protein 2807286 4898087 Rsph17029_2661 Rhodobacter sphaeroides ATCC 17029 phage SPO1 DNA polymerase-related protein YP_001044535.1 2806504 R 349101 CDS YP_001044536.1 126463422 4896579 2807403..2808365 1 NC_009049.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2808365 pyrB 4896579 pyrB Rhodobacter sphaeroides ATCC 17029 aspartate carbamoyltransferase catalytic subunit YP_001044536.1 2807403 D 349101 CDS YP_001044537.1 126463423 4897988 2808362..2809639 1 NC_009049.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: rsp:RSP_1003 dihydroorotase and related cyclic amidohydrolase; dihydroorotase, multifunctional complex type 2809639 4897988 Rsph17029_2663 Rhodobacter sphaeroides ATCC 17029 dihydroorotase, multifunctional complex type YP_001044537.1 2808362 D 349101 CDS YP_001044538.1 126463424 4896063 2809862..2810467 1 NC_009049.1 PFAM: protein of unknown function DUF205; KEGG: rsp:RSP_1004 hypothetical protein; hypothetical protein 2810467 4896063 Rsph17029_2664 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044538.1 2809862 D 349101 CDS YP_001044539.1 126463425 4897983 complement(2810571..2811935) 1 NC_009049.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase, GCS2; KEGG: rsp:RSP_1005 putative glutathione synthetase; glutamate--cysteine ligase 2811935 4897983 Rsph17029_2665 Rhodobacter sphaeroides ATCC 17029 glutamate--cysteine ligase YP_001044539.1 2810571 R 349101 CDS YP_001044540.1 126463426 4897052 complement(2811988..2812554) 1 NC_009049.1 KEGG: rsp:RSP_1006 hypothetical protein; hypothetical protein 2812554 4897052 Rsph17029_2666 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044540.1 2811988 R 349101 CDS YP_001044541.1 126463427 4896290 complement(2812551..2813324) 1 NC_009049.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2813324 4896290 Rsph17029_2667 Rhodobacter sphaeroides ATCC 17029 16S ribosomal RNA methyltransferase RsmE YP_001044541.1 2812551 R 349101 CDS YP_001044542.1 126463428 4896472 2813336..2814337 1 NC_009049.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 2814337 ubiA 4896472 ubiA Rhodobacter sphaeroides ATCC 17029 4-hydroxybenzoate polyprenyltransferase YP_001044542.1 2813336 D 349101 CDS YP_001044543.1 126463429 4897573 2814407..2816365 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1009 possible outer membrane protein, OmpA family / putative chemotaxis MotB protein; OmpA/MotB domain-containing protein 2816365 4897573 Rsph17029_2669 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001044543.1 2814407 D 349101 CDS YP_001044544.1 126463430 4895634 2816485..2816808 1 NC_009049.1 KEGG: rsp:RSP_1011 hypothetical protein; hypothetical protein 2816808 4895634 Rsph17029_2670 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044544.1 2816485 D 349101 CDS YP_001044545.1 126463431 4895197 complement(2816795..2817649) 1 NC_009049.1 KEGG: rsp:RSP_1010 possible esterase/lipase/thioesterase; putative esterase/lipase/thioesterase 2817649 4895197 Rsph17029_2671 Rhodobacter sphaeroides ATCC 17029 putative esterase/lipase/thioesterase YP_001044545.1 2816795 R 349101 CDS YP_001044546.1 126463432 4897069 2817736..2819214 1 NC_009049.1 KEGG: rsp:RSP_1012 succinate-semialdehyde dehdyrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 2819214 4897069 Rsph17029_2672 Rhodobacter sphaeroides ATCC 17029 succinate-semialdehyde dehydrogenase YP_001044546.1 2817736 D 349101 CDS YP_001044547.1 126463433 4895290 2819279..2820553 1 NC_009049.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rsp:RSP_1013 possible hemolysin; hypothetical protein 2820553 4895290 Rsph17029_2673 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044547.1 2819279 D 349101 CDS YP_001044548.1 126463434 4895345 2820596..2821135 1 NC_009049.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rsp:RSP_1014 sigma24; ECF subfamily RNA polymerase sigma-24 factor 2821135 4895345 Rsph17029_2674 Rhodobacter sphaeroides ATCC 17029 ECF subfamily RNA polymerase sigma-24 factor YP_001044548.1 2820596 D 349101 CDS YP_001044549.1 126463435 4897513 2821132..2823087 1 NC_009049.1 PFAM: von Willebrand factor, type A; KEGG: rsp:RSP_1015 putative membrane protein with von Willebrand (VWA) domain; von Willebrand factor type A domain-containing protein 2823087 4897513 Rsph17029_2675 Rhodobacter sphaeroides ATCC 17029 von Willebrand factor type A domain-containing protein YP_001044549.1 2821132 D 349101 CDS YP_001044550.1 126463436 4896620 complement(2823340..2823816) 1 NC_009049.1 PFAM: heat shock protein Hsp20; KEGG: rsp:RSP_1016 small heat shock protein; heat shock protein Hsp20 2823816 4896620 Rsph17029_2676 Rhodobacter sphaeroides ATCC 17029 heat shock protein Hsp20 YP_001044550.1 2823340 R 349101 CDS YP_001044551.1 126463437 4896558 complement(2824108..2824908) 1 NC_009049.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: rsp:RSP_1017 hypothetical protein; peptidase S1 and S6, chymotrypsin/Hap 2824908 4896558 Rsph17029_2677 Rhodobacter sphaeroides ATCC 17029 peptidase S1 and S6, chymotrypsin/Hap YP_001044551.1 2824108 R 349101 CDS YP_001044552.1 126463438 4897987 complement(2824966..2826267) 1 NC_009049.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: rsp:RSP_1018 glycolate oxidase iron-sulfur subunit; hypothetical protein 2826267 4897987 Rsph17029_2678 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044552.1 2824966 R 349101 CDS YP_001044553.1 126463439 4897506 complement(2826280..2827356) 1 NC_009049.1 PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_1019 putative glycolate oxidase subunit protein; FAD linked oxidase domain-containing protein 2827356 4897506 Rsph17029_2679 Rhodobacter sphaeroides ATCC 17029 FAD linked oxidase domain-containing protein YP_001044553.1 2826280 R 349101 CDS YP_001044554.1 126463440 4896740 complement(2827421..2828854) 1 NC_009049.1 PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_1020 putative glycolate oxidase subunit protein; FAD linked oxidase domain-containing protein 2828854 4896740 Rsph17029_2680 Rhodobacter sphaeroides ATCC 17029 FAD linked oxidase domain-containing protein YP_001044554.1 2827421 R 349101 CDS YP_001044555.1 126463441 4896213 2828936..2829691 1 NC_009049.1 PFAM: protein of unknown function DUF599; KEGG: rsp:RSP_1021 hypothetical protein; hypothetical protein 2829691 4896213 Rsph17029_2681 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044555.1 2828936 D 349101 CDS YP_001044556.1 126463442 4897376 complement(2829694..2831757) 1 NC_009049.1 KEGG: rsp:RSP_6144 conserved hypothetical protein (possible transmembrane); hypothetical protein 2831757 4897376 Rsph17029_2682 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044556.1 2829694 R 349101 CDS YP_001044557.1 126463443 4897251 complement(2831754..2834531) 1 NC_009049.1 TIGRFAM: conserved hypothetical membrane protein; KEGG: rsp:RSP_1022 conserved hypothetical protein (possibly transmembrane); hypothetical protein 2834531 4897251 Rsph17029_2683 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044557.1 2831754 R 349101 CDS YP_001044558.1 126463444 4897178 complement(2834531..2835403) 1 NC_009049.1 KEGG: rsp:RSP_1023 hypothetical protein; hypothetical protein 2835403 4897178 Rsph17029_2684 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044558.1 2834531 R 349101 CDS YP_001044559.1 126463445 4897395 complement(2835400..2836416) 1 NC_009049.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: rsp:RSP_1024 putative MoxR family protein; ATPase 2836416 4897395 Rsph17029_2685 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001044559.1 2835400 R 349101 CDS YP_001044560.1 126463446 4898054 2836499..2837065 1 NC_009049.1 PFAM: protein of unknown function DUF1285; KEGG: rsp:RSP_1025 hypothetical protein; hypothetical protein 2837065 4898054 Rsph17029_2686 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044560.1 2836499 D 349101 CDS YP_001044561.1 126463447 4896188 2837062..2837286 1 NC_009049.1 KEGG: rsp:RSP_1026 hypothetical protein; hypothetical protein 2837286 4896188 Rsph17029_2687 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044561.1 2837062 D 349101 CDS YP_001044562.1 126463448 4897592 2837385..2837564 1 NC_009049.1 KEGG: rsp:RSP_1027 hypothetical protein; hypothetical protein 2837564 4897592 Rsph17029_2688 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044562.1 2837385 D 349101 CDS YP_001044563.1 126463449 4896469 2837611..2840424 1 NC_009049.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 2840424 4896469 Rsph17029_2689 Rhodobacter sphaeroides ATCC 17029 DNA polymerase I YP_001044563.1 2837611 D 349101 CDS YP_001044564.1 126463450 4897062 complement(2840552..2840935) 1 NC_009049.1 PFAM: histidine triad (HIT) protein; KEGG: rsp:RSP_1029 possible histidine triad (HIT) protein; histidine triad (HIT) protein 2840935 4897062 Rsph17029_2690 Rhodobacter sphaeroides ATCC 17029 histidine triad (HIT) protein YP_001044564.1 2840552 R 349101 CDS YP_001044565.1 126463451 4895221 complement(2841396..2842388) 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_1030 putative PfkB family carbohydrate kinase; ribokinase-like domain-containing protein 2842388 4895221 Rsph17029_2691 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001044565.1 2841396 R 349101 CDS YP_001044566.1 126463452 4895405 complement(2842385..2843029) 1 NC_009049.1 KEGG: rsp:RSP_1031 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 2843029 4895405 Rsph17029_2692 Rhodobacter sphaeroides ATCC 17029 endonuclease III YP_001044566.1 2842385 R 349101 CDS YP_001044567.1 126463453 4895419 2843142..2843990 1 NC_009049.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rsp:RSP_1032 possible O6-methylguanine-DNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2843990 4895419 Rsph17029_2693 Rhodobacter sphaeroides ATCC 17029 methylated-DNA--protein-cysteine methyltransferase YP_001044567.1 2843142 D 349101 CDS YP_001044568.1 126463454 4895441 2844105..2844791 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1033 OmpA family protein; OmpA/MotB domain-containing protein 2844791 4895441 Rsph17029_2694 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001044568.1 2844105 D 349101 CDS YP_001044569.1 126463455 4895467 2845032..2845799 1 NC_009049.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_1034 pyruvate dehydrogenase complex repressor; GntR family transcriptional regulator 2845799 4895467 Rsph17029_2695 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001044569.1 2845032 D 349101 CDS YP_001044570.1 126463456 4895530 complement(2846029..2846583) 1 NC_009049.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 2846583 4895530 Rsph17029_2696 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit B YP_001044570.1 2846029 R 349101 CDS YP_001044571.1 126463457 4895655 complement(2846589..2847131) 1 NC_009049.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 2847131 4895655 Rsph17029_2697 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit B' YP_001044571.1 2846589 R 349101 CDS YP_001044572.1 126463458 4896157 complement(2847201..2847416) 1 NC_009049.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 2847416 4896157 Rsph17029_2698 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit C YP_001044572.1 2847201 R 349101 CDS YP_001044573.1 126463459 4896373 complement(2847490..2848275) 1 NC_009049.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 2848275 4896373 Rsph17029_2699 Rhodobacter sphaeroides ATCC 17029 F0F1 ATP synthase subunit A YP_001044573.1 2847490 R 349101 CDS YP_001044574.1 126463460 4896404 complement(2848279..2848614) 1 NC_009049.1 KEGG: rsp:RSP_1039 FoF1 ATP synthase, subunit I; FoF1 ATP synthase subunit I 2848614 4896404 Rsph17029_2700 Rhodobacter sphaeroides ATCC 17029 FoF1 ATP synthase subunit I YP_001044574.1 2848279 R 349101 CDS YP_001044575.1 126463461 4896443 2848822..2849175 1 NC_009049.1 PFAM: regulatory protein, ArsR; KEGG: rsp:RSP_1040 transcriptional regulator, ArsR family; regulatory protein ArsR 2849175 4896443 Rsph17029_2701 Rhodobacter sphaeroides ATCC 17029 regulatory protein ArsR YP_001044575.1 2848822 D 349101 CDS YP_001044576.1 126463462 4896893 complement(2849210..2850715) 1 NC_009049.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 2850715 4896893 Rsph17029_2702 Rhodobacter sphaeroides ATCC 17029 malonyl-CoA synthase YP_001044576.1 2849210 R 349101 CDS YP_001044577.1 126463463 4896935 complement(2850743..2851552) 1 NC_009049.1 KEGG: rsp:RSP_1042 chromosome partitioning protein; chromosome partitioning protein 2851552 4896935 Rsph17029_2703 Rhodobacter sphaeroides ATCC 17029 chromosome partitioning protein YP_001044577.1 2850743 R 349101 CDS YP_001044578.1 126463464 4897126 complement(2851761..2851982) 1 NC_009049.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2851982 rpmE 4897126 rpmE Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L31 YP_001044578.1 2851761 R 349101 CDS YP_001044579.1 126463465 4897174 complement(2851995..2852369) 1 NC_009049.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2852369 rplS 4897174 rplS Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L19 YP_001044579.1 2851995 R 349101 CDS YP_001044580.1 126463466 4897643 complement(2852418..2853254) 1 NC_009049.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 2853254 trmD 4897643 trmD Rhodobacter sphaeroides ATCC 17029 tRNA (guanine-N(1)-)-methyltransferase YP_001044580.1 2852418 R 349101 CDS YP_001044581.1 126463467 4897617 complement(2853313..2854179) 1 NC_009049.1 KEGG: rsp:RSP_1046 hypothetical protein; hypothetical protein 2854179 4897617 Rsph17029_2707 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044581.1 2853313 R 349101 CDS YP_001044582.1 126463468 4897837 complement(2854333..2854842) 1 NC_009049.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 2854842 rimM 4897837 rimM Rhodobacter sphaeroides ATCC 17029 16S rRNA-processing protein RimM YP_001044582.1 2854333 R 349101 CDS YP_001044583.1 126463469 4895569 complement(2854943..2855293) 1 NC_009049.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2855293 rpsP 4895569 rpsP Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S16 YP_001044583.1 2854943 R 349101 CDS YP_001044584.1 126463470 4896514 complement(2855333..2855632) 1 NC_009049.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 2855632 4896514 Rsph17029_2710 Rhodobacter sphaeroides ATCC 17029 chorismate mutase YP_001044584.1 2855333 R 349101 CDS YP_001044585.1 126463471 4897991 complement(2855671..2856231) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1050 acetyltransferase (GNAT) family; N-acetyltransferase GCN5 2856231 4897991 Rsph17029_2711 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044585.1 2855671 R 349101 CDS YP_001044586.1 126463472 4895277 complement(2856228..2856758) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1051 hypothetical protein; N-acetyltransferase GCN5 2856758 4895277 Rsph17029_2712 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044586.1 2856228 R 349101 CDS YP_001044587.1 126463473 4895637 complement(2856755..2857291) 1 NC_009049.1 KEGG: rsp:RSP_1052 possible acetyltransferase; putative acetyltransferase 2857291 4895637 Rsph17029_2713 Rhodobacter sphaeroides ATCC 17029 putative acetyltransferase YP_001044587.1 2856755 R 349101 CDS YP_001044588.1 126463474 4896727 complement(2857368..2858885) 1 NC_009049.1 KEGG: rsp:RSP_1053 signal recognition particle protein ffh; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein 2858885 4896727 Rsph17029_2714 Rhodobacter sphaeroides ATCC 17029 signal recognition particle protein YP_001044588.1 2857368 R 349101 CDS YP_001044589.1 126463475 4895683 complement(2859166..2859666) 1 NC_009049.1 KEGG: rsp:RSP_6230 hypothetical protein; hypothetical protein 2859666 4895683 Rsph17029_2715 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044589.1 2859166 R 349101 CDS YP_001044590.1 126463476 4895593 2859880..2860758 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1055 transcriptional regulator, LysR family; LysR family transcriptional regulator 2860758 4895593 Rsph17029_2716 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044590.1 2859880 D 349101 CDS YP_001044591.1 126463477 4896964 complement(2861269..2862669) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1056 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2862669 4896964 Rsph17029_2717 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001044591.1 2861269 R 349101 CDS YP_001044592.1 126463478 4896922 complement(2862727..2864139) 1 NC_009049.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rsp:RSP_1057 putative mercuric reductase protein; pyridine nucleotide-disulfide oxidoreductase dimerisation subunit 2864139 4896922 Rsph17029_2718 Rhodobacter sphaeroides ATCC 17029 pyridine nucleotide-disulfide oxidoreductase dimerisation subunit YP_001044592.1 2862727 R 349101 CDS YP_001044593.1 126463479 4896996 complement(2864140..2864856) 1 NC_009049.1 KEGG: rsp:RSP_1058 hypothetical transmemebrane protein; hypothetical protein 2864856 4896996 Rsph17029_2719 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044593.1 2864140 R 349101 CDS YP_001044594.1 126463480 4897081 2865050..2865184 1 NC_009049.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 2865184 rpmH 4897081 rpmH Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L34 YP_001044594.1 2865050 D 349101 CDS YP_001044595.1 126463481 4897607 2865207..2865620 1 NC_009049.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rsp:RSP_1060 ribonuclease P protein component; ribonuclease P protein component 2865620 4897607 Rsph17029_2721 Rhodobacter sphaeroides ATCC 17029 ribonuclease P protein component YP_001044595.1 2865207 D 349101 CDS YP_001044596.1 126463482 4898019 2865617..2865871 1 NC_009049.1 PFAM: protein of unknown function DUF37; KEGG: rsp:RSP_1061 hypothetical protein; hypothetical protein 2865871 4898019 Rsph17029_2722 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044596.1 2865617 D 349101 CDS YP_001044597.1 126463483 4898011 2865898..2866776 1 NC_009049.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2866776 4898011 Rsph17029_2723 Rhodobacter sphaeroides ATCC 17029 C32 tRNA thiolase YP_001044597.1 2865898 D 349101 CDS YP_001044598.1 126463484 4898040 2866849..2868375 1 NC_009049.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rsp:RSP_1063 putative cyclic-diGMP cyclase/phophodiesterase; diguanylate cyclase/phosphodiesterase 2868375 4898040 Rsph17029_2724 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase/phosphodiesterase YP_001044598.1 2866849 D 349101 CDS YP_001044599.1 126463485 4896272 2868485..2870356 1 NC_009049.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 2870356 4896272 Rsph17029_2725 Rhodobacter sphaeroides ATCC 17029 putative inner membrane protein translocase component YidC YP_001044599.1 2868485 D 349101 CDS YP_001044600.1 126463486 4897460 2870353..2871096 1 NC_009049.1 PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein; MOSC domain-containing protein 2871096 4897460 Rsph17029_2726 Rhodobacter sphaeroides ATCC 17029 MOSC domain-containing protein YP_001044600.1 2870353 D 349101 CDS YP_001044601.1 126463487 4896400 2871093..2871746 1 NC_009049.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2871746 engB 4896400 engB Rhodobacter sphaeroides ATCC 17029 ribosome biogenesis GTP-binding protein YsxC YP_001044601.1 2871093 D 349101 CDS YP_001044602.1 126463488 4896502 complement(2871750..2872481) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_1067 short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR 2872481 4896502 Rsph17029_2728 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001044602.1 2871750 R 349101 CDS YP_001044603.1 126463489 4896519 2872614..2873495 1 NC_009049.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 2873495 4896519 Rsph17029_2729 Rhodobacter sphaeroides ATCC 17029 acetylglutamate kinase YP_001044603.1 2872614 D 349101 CDS YP_001044604.1 126463490 4897114 2873495..2874139 1 NC_009049.1 KEGG: rsp:RSP_1069 hypothetical protein; hypothetical protein 2874139 4897114 Rsph17029_2730 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044604.1 2873495 D 349101 CDS YP_001044605.1 126463491 4896527 2874136..2874642 1 NC_009049.1 PFAM: Phosphoglycerate mutase; KEGG: rsp:RSP_1070 hypothetical protein; putative phosphohistidine phosphatase, SixA 2874642 4896527 Rsph17029_2731 Rhodobacter sphaeroides ATCC 17029 putative phosphohistidine phosphatase, SixA YP_001044605.1 2874136 D 349101 CDS YP_001044606.1 126463492 4898017 complement(2874726..2875166) 1 NC_009049.1 PFAM: molybdopterin biosynthesis MoaE; KEGG: rsp:RSP_1071 molybdopterin converting factor subunit 2; molybdopterin biosynthesis MoaE 2875166 4898017 Rsph17029_2732 Rhodobacter sphaeroides ATCC 17029 molybdopterin biosynthesis MoaE YP_001044606.1 2874726 R 349101 CDS YP_001044607.1 126463493 4896873 complement(2875168..2875416) 1 NC_009049.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rsp:RSP_1072 putative molybdopterin MPT converting factor, subunit 1 protein; molybdopterin converting factor subunit 1 2875416 4896873 Rsph17029_2733 Rhodobacter sphaeroides ATCC 17029 molybdopterin converting factor subunit 1 YP_001044607.1 2875168 R 349101 CDS YP_001044608.1 126463494 4897110 complement(2875413..2876078) 1 NC_009049.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_1073 phosphatidylglycerol phosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2876078 4897110 Rsph17029_2734 Rhodobacter sphaeroides ATCC 17029 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001044608.1 2875413 R 349101 CDS YP_001044609.1 126463495 4897201 complement(2876158..2878029) 1 NC_009049.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2878029 uvrC 4897201 uvrC Rhodobacter sphaeroides ATCC 17029 excinuclease ABC subunit C YP_001044609.1 2876158 R 349101 CDS YP_001044610.1 126463496 4895594 complement(2878332..2879105) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1075 short chain dehydrogenase; short chain dehydrogenase 2879105 4895594 Rsph17029_2736 Rhodobacter sphaeroides ATCC 17029 short chain dehydrogenase YP_001044610.1 2878332 R 349101 CDS YP_001044611.1 126463497 4895685 complement(2879287..2880084) 1 NC_009049.1 PFAM: peptidase S49; KEGG: rsp:RSP_1076 peptidase family S49; peptidase S49 2880084 4895685 Rsph17029_2737 Rhodobacter sphaeroides ATCC 17029 peptidase S49 YP_001044611.1 2879287 R 349101 CDS YP_001044612.1 126463498 4897945 2880558..2881448 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1077 transcriptional regulator, LysR family; LysR family transcriptional regulator 2881448 4897945 Rsph17029_2738 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044612.1 2880558 D 349101 CDS YP_001044613.1 126463499 4897917 2881549..2882022 1 NC_009049.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 2882022 4897917 Rsph17029_2739 Rhodobacter sphaeroides ATCC 17029 formate dehydrogenase subunit gamma YP_001044613.1 2881549 D 349101 CDS YP_001044614.1 126463500 4897902 2882019..2883548 1 NC_009049.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rsp:RSP_1079 NAD dependent formate dehydrogenase, beta subunit (51 kDa); NADH dehydrogenase (quinone) 2883548 4897902 Rsph17029_2740 Rhodobacter sphaeroides ATCC 17029 NADH dehydrogenase (quinone) YP_001044614.1 2882019 D 349101 CDS YP_001044615.1 126463501 4897707 2883545..2886427 1 NC_009049.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rsp:RSP_1080 NAD-dependent formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 2886427 4897707 Rsph17029_2741 Rhodobacter sphaeroides ATCC 17029 formate dehydrogenase subunit alpha YP_001044615.1 2883545 D 349101 CDS YP_001044616.1 126463502 4897262 2886424..2887239 1 NC_009049.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 2887239 4897262 Rsph17029_2742 Rhodobacter sphaeroides ATCC 17029 formate dehydrogenase accessory protein YP_001044616.1 2886424 D 349101 CDS YP_001044617.1 126463503 4896973 2887229..2887450 1 NC_009049.1 KEGG: rsp:RSP_1082 NAD-dependent formate dehydrogenase, delta subunit; NAD-dependent formate dehydrogenase subunit delta 2887450 4896973 Rsph17029_2743 Rhodobacter sphaeroides ATCC 17029 NAD-dependent formate dehydrogenase subunit delta YP_001044617.1 2887229 D 349101 CDS YP_001044618.1 126463504 4897240 complement(2887472..2887681) 1 NC_009049.1 KEGG: rsp:RSP_6146 hypothetical protein; hypothetical protein 2887681 4897240 Rsph17029_2744 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044618.1 2887472 R 349101 CDS YP_001044619.1 126463505 4897559 2887899..2889116 1 NC_009049.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1084 putative glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 2889116 4897559 Rsph17029_2745 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001044619.1 2887899 D 349101 CDS YP_001044620.1 126463506 4897520 complement(2889098..2889799) 1 NC_009049.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1083 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2889799 4897520 Rsph17029_2746 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001044620.1 2889098 R 349101 CDS YP_001044621.1 126463507 4896609 complement(2890302..2890592) 1 NC_009049.1 hypothetical protein 2890592 4896609 Rsph17029_2747 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044621.1 2890302 R 349101 CDS YP_001044622.1 126463508 4895523 2890645..2890890 1 NC_009049.1 SMART: WGR domain protein; KEGG: rsp:RSP_1085 hypothetical protein; WGR domain-containing protein 2890890 4895523 Rsph17029_2748 Rhodobacter sphaeroides ATCC 17029 WGR domain-containing protein YP_001044622.1 2890645 D 349101 CDS YP_001044623.1 126463509 4897977 2890887..2891942 1 NC_009049.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rsp:RSP_1086 saccharopine dehydrogenase (NAD+, L-lysine forming); NAD(P) transhydrogenase subunit alpha 2891942 4897977 Rsph17029_2749 Rhodobacter sphaeroides ATCC 17029 NAD(P) transhydrogenase subunit alpha YP_001044623.1 2890887 D 349101 CDS YP_001044624.1 126463510 4897040 complement(2891989..2892726) 1 NC_009049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1087 short-chain dehydrogenase/reductase family member; short-chain dehydrogenase/reductase SDR 2892726 4897040 Rsph17029_2750 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001044624.1 2891989 R 349101 CDS YP_001044625.1 126463511 4897348 complement(2892723..2893283) 1 NC_009049.1 KEGG: rsp:RSP_1088 hypothetical protein; hypothetical protein 2893283 4897348 Rsph17029_2751 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044625.1 2892723 R 349101 CDS YP_001044626.1 126463512 4896580 complement(2893287..2894492) 1 NC_009049.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1089 sugar/cation symporter, GPH family; major facilitator superfamily transporter 2894492 4896580 Rsph17029_2752 Rhodobacter sphaeroides ATCC 17029 major facilitator superfamily transporter YP_001044626.1 2893287 R 349101 CDS YP_001044627.1 126463513 4897406 complement(2894489..2895238) 1 NC_009049.1 PFAM: protein of unknown function DUF1365; KEGG: rsp:RSP_1090 putative cyclopropane/cyclopropene fatty acid synthesis protein; hypothetical protein 2895238 4897406 Rsph17029_2753 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044627.1 2894489 R 349101 CDS YP_001044628.1 126463514 4895099 complement(2895249..2896541) 1 NC_009049.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rsp:RSP_1091 putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase; amine oxidase 2896541 4895099 Rsph17029_2754 Rhodobacter sphaeroides ATCC 17029 amine oxidase YP_001044628.1 2895249 R 349101 CDS YP_001044629.1 126463515 4897702 2896795..2897301 1 NC_009049.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 2897301 4897702 Rsph17029_2755 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma factor RpoE YP_001044629.1 2896795 D 349101 CDS YP_001044630.1 126463516 4895563 2897310..2897951 1 NC_009049.1 TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: rsp:RSP_1093 anti-sigma factor ChrR; anti-ECF sigma factor ChrR 2897951 4895563 Rsph17029_2756 Rhodobacter sphaeroides ATCC 17029 anti-ECF sigma factor ChrR YP_001044630.1 2897310 D 349101 CDS YP_001044631.1 126463517 4897340 complement(2898007..2899143) 1 NC_009049.1 PFAM: protein of unknown function DUF195; KEGG: rsp:RSP_1094 hypothetical protein; hypothetical protein 2899143 4897340 Rsph17029_2757 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044631.1 2898007 R 349101 CDS YP_001044632.1 126463518 4898056 complement(2899154..2901004) 1 NC_009049.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 2901004 mutL 4898056 mutL Rhodobacter sphaeroides ATCC 17029 DNA mismatch repair protein YP_001044632.1 2899154 R 349101 CDS YP_001044633.1 126463519 4896114 complement(2901090..2902397) 1 NC_009049.1 PFAM: peptidase M16 domain protein; KEGG: rsp:RSP_1096 putative zinc protease; peptidase M16 domain-containing protein 2902397 4896114 Rsph17029_2759 Rhodobacter sphaeroides ATCC 17029 peptidase M16 domain-containing protein YP_001044633.1 2901090 R 349101 CDS YP_001044634.1 126463520 4897344 complement(2902394..2903740) 1 NC_009049.1 PFAM: peptidase M16 domain protein; KEGG: rsp:RSP_1097 putative zinc protease; peptidase M16 domain-containing protein 2903740 4897344 Rsph17029_2760 Rhodobacter sphaeroides ATCC 17029 peptidase M16 domain-containing protein YP_001044634.1 2902394 R 349101 CDS YP_001044635.1 126463521 4897412 complement(2903820..2904347) 1 NC_009049.1 KEGG: rsp:RSP_1098 hypothetical protein; hypothetical protein 2904347 4897412 Rsph17029_2761 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044635.1 2903820 R 349101 CDS YP_001044636.1 126463522 4897284 complement(2904401..2904958) 1 NC_009049.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2904958 4897284 Rsph17029_2762 Rhodobacter sphaeroides ATCC 17029 lipoprotein signal peptidase YP_001044636.1 2904401 R 349101 CDS YP_001044637.1 126463523 4897104 complement(2904960..2906549) 1 NC_009049.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2906549 purH 4897104 purH Rhodobacter sphaeroides ATCC 17029 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001044637.1 2904960 R 349101 CDS YP_001044638.1 126463524 4897256 complement(2906587..2908290) 1 NC_009049.1 PFAM: Heparinase II/III family protein; KEGG: rsp:RSP_1101 hypothetical protein; heparinase II/III family protein 2908290 4897256 Rsph17029_2764 Rhodobacter sphaeroides ATCC 17029 heparinase II/III family protein YP_001044638.1 2906587 R 349101 CDS YP_001044639.1 126463525 4897046 complement(2908324..2909556) 1 NC_009049.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; methyltransferase small; KEGG: rsp:RSP_6147 rRNA methyltransferase RsmB-like; Fmu (Sun) domain-containing protein 2909556 4897046 Rsph17029_2765 Rhodobacter sphaeroides ATCC 17029 Fmu (Sun) domain-containing protein YP_001044639.1 2908324 R 349101 CDS YP_001044640.1 126463526 4897418 2909616..2909804 1 NC_009049.1 PFAM: protein of unknown function DUF1674; KEGG: rsp:RSP_1104 hypothetical protein; hypothetical protein 2909804 4897418 Rsph17029_2766 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044640.1 2909616 D 349101 CDS YP_001044641.1 126463527 4897445 complement(2910017..2910826) 1 NC_009049.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2910826 4897445 Rsph17029_2767 Rhodobacter sphaeroides ATCC 17029 dihydrodipicolinate reductase YP_001044641.1 2910017 R 349101 CDS YP_001044642.1 126463528 4897919 2911073..2911486 1 NC_009049.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2911486 rbfA 4897919 rbfA Rhodobacter sphaeroides ATCC 17029 ribosome-binding factor A YP_001044642.1 2911073 D 349101 CDS YP_001044643.1 126463529 4895328 2911476..2912213 1 NC_009049.1 KEGG: rsp:RSP_1107 hypothetical protein; hypothetical protein 2912213 4895328 Rsph17029_2769 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044643.1 2911476 D 349101 CDS YP_001044644.1 126463530 4897790 2912281..2913186 1 NC_009049.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 2913186 truB 4897790 truB Rhodobacter sphaeroides ATCC 17029 tRNA pseudouridine synthase B YP_001044644.1 2912281 D 349101 CDS YP_001044645.1 126463531 4897881 2913406..2914482 1 NC_009049.1 TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rsp:RSP_1109 cysteine synthase; cysteine synthase A 2914482 4897881 Rsph17029_2771 Rhodobacter sphaeroides ATCC 17029 cysteine synthase A YP_001044645.1 2913406 D 349101 CDS YP_001044646.1 126463532 4895488 2914883..2915395 1 NC_009049.1 PFAM: protein of unknown function DUF1643; KEGG: rsp:RSP_1110 hypothetical protein; hypothetical protein 2915395 4895488 Rsph17029_2772 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044646.1 2914883 D 349101 CDS YP_001044647.1 126463533 4897863 2915636..2915905 1 NC_009049.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2915905 rpsO 4897863 rpsO Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S15 YP_001044647.1 2915636 D 349101 CDS YP_001044648.1 126463534 4897713 2916086..2918236 1 NC_009049.1 KEGG: rsp:RSP_1112 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 2918236 4897713 Rsph17029_2774 Rhodobacter sphaeroides ATCC 17029 polynucleotide phosphorylase/polyadenylase YP_001044648.1 2916086 D 349101 CDS YP_001044649.1 126463535 4895329 complement(2918558..2919871) 1 NC_009049.1 PFAM: Hemolysin-type calcium-binding region; KEGG: rsp:RSP_1113 hemolysin-type calcium-binding region; RTX toxin; hemolysin-type calcium-binding protein 2919871 4895329 Rsph17029_2775 Rhodobacter sphaeroides ATCC 17029 hemolysin-type calcium-binding protein YP_001044649.1 2918558 R 349101 CDS YP_001044650.1 126463536 4895351 2920091..2920933 1 NC_009049.1 KEGG: rsp:RSP_1114 hemolysin-type calcium-binding toxin; hemolysin-type calcium-binding toxin 2920933 4895351 Rsph17029_2776 Rhodobacter sphaeroides ATCC 17029 hemolysin-type calcium-binding toxin YP_001044650.1 2920091 D 349101 CDS YP_001044651.1 126463537 4895553 2920994..2923039 1 NC_009049.1 KEGG: rsp:RSP_1115 hypothetical protein; hypothetical protein 2923039 4895553 Rsph17029_2777 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044651.1 2920994 D 349101 CDS YP_001044652.1 126463538 4895400 2923039..2924280 1 NC_009049.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1116 glycosyltransferase; group 1 glycosyl transferase 2924280 4895400 Rsph17029_2778 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001044652.1 2923039 D 349101 CDS YP_001044653.1 126463539 4895463 2924277..2926463 1 NC_009049.1 KEGG: rsp:RSP_1117 hypothetical protein; hypothetical protein 2926463 4895463 Rsph17029_2779 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044653.1 2924277 D 349101 CDS YP_001044654.1 126463540 4895421 2926460..2927737 1 NC_009049.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1118 group 1 glycosyltransferase; group 1 glycosyl transferase 2927737 4895421 Rsph17029_2780 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001044654.1 2926460 D 349101 CDS YP_001044655.1 126463541 4895512 2927730..2929451 1 NC_009049.1 KEGG: rsp:RSP_1119 ABC protein exporter, fused ATPase and inner membrane subunits; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 2929451 4895512 Rsph17029_2781 Rhodobacter sphaeroides ATCC 17029 type I secretion system ATPase YP_001044655.1 2927730 D 349101 CDS YP_001044656.1 126463542 4895534 2929448..2930749 1 NC_009049.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_1120 protein secretion protein, HlyD family, membrane fusion protein; HlyD family type I secretion membrane fusion protein 2930749 4895534 Rsph17029_2782 Rhodobacter sphaeroides ATCC 17029 HlyD family type I secretion membrane fusion protein YP_001044656.1 2929448 D 349101 CDS YP_001044657.1 126463543 4895163 2930819..2931625 1 NC_009049.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rsp:RSP_1121 acetyl transferase, isoleucine patch superfamily; hexapaptide repeat-containing transferase 2931625 4895163 Rsph17029_2783 Rhodobacter sphaeroides ATCC 17029 hexapaptide repeat-containing transferase YP_001044657.1 2930819 D 349101 CDS YP_001044658.1 126463544 4897750 2931629..2932216 1 NC_009049.1 KEGG: rsp:RSP_1122 hypothetical protein; hypothetical protein 2932216 4897750 Rsph17029_2784 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044658.1 2931629 D 349101 CDS YP_001044659.1 126463545 4897841 complement(2932228..2935050) 1 NC_009049.1 KEGG: rsp:RSP_1123 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 2935050 4897841 Rsph17029_2785 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit alpha YP_001044659.1 2932228 R 349101 CDS YP_001044660.1 126463546 4897410 complement(2935095..2936354) 1 NC_009049.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1125 membrane bound lytic murein transglycosylase B; lytic murein transglycosylase 2936354 4897410 Rsph17029_2786 Rhodobacter sphaeroides ATCC 17029 lytic murein transglycosylase YP_001044660.1 2935095 R 349101 CDS YP_001044661.1 126463547 4895885 complement(2936538..2938796) 1 NC_009049.1 KEGG: rsp:RSP_1126 exoribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R 2938796 4895885 Rsph17029_2787 Rhodobacter sphaeroides ATCC 17029 ribonuclease R YP_001044661.1 2936538 R 349101 CDS YP_001044662.1 126463548 4895893 complement(2938842..2939258) 1 NC_009049.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1127 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2939258 4895893 Rsph17029_2788 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001044662.1 2938842 R 349101 CDS YP_001044663.1 126463549 4895892 complement(2939255..2940397) 1 NC_009049.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2940397 4895892 Rsph17029_2789 Rhodobacter sphaeroides ATCC 17029 succinyl-diaminopimelate desuccinylase YP_001044663.1 2939255 R 349101 CDS YP_001044664.1 126463550 4897101 complement(2940448..2940780) 1 NC_009049.1 KEGG: rsp:RSP_1129 hypothetical protein; hypothetical protein 2940780 4897101 Rsph17029_2790 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044664.1 2940448 R 349101 CDS YP_001044665.1 126463551 4896295 complement(2940704..2941522) 1 NC_009049.1 KEGG: rsp:RSP_1130 hypothetical membrane protein; hypothetical protein 2941522 4896295 Rsph17029_2791 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044665.1 2940704 R 349101 CDS YP_001044666.1 126463552 4897703 complement(2941633..2942457) 1 NC_009049.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2942457 dapD 4897703 dapD Rhodobacter sphaeroides ATCC 17029 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001044666.1 2941633 R 349101 CDS YP_001044667.1 126463553 4896586 2942542..2943348 1 NC_009049.1 PFAM: conserved hypothetical protein 730; KEGG: rsp:RSP_1132 hypothetical protein; hypothetical protein 2943348 4896586 Rsph17029_2793 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044667.1 2942542 D 349101 CDS YP_001044668.1 126463554 4896638 complement(2943352..2943810) 1 NC_009049.1 KEGG: rsp:RSP_1133 hypothetical protein; hypothetical protein 2943810 4896638 Rsph17029_2794 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044668.1 2943352 R 349101 CDS YP_001044669.1 126463555 4896646 complement(2943973..2945886) 1 NC_009049.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2945886 4896646 Rsph17029_2795 Rhodobacter sphaeroides ATCC 17029 1-deoxy-D-xylulose-5-phosphate synthase YP_001044669.1 2943973 R 349101 CDS YP_001044670.1 126463556 4896633 complement(2945896..2946765) 1 NC_009049.1 PFAM: Polyprenyl synthetase; KEGG: rsp:RSP_1135 geranylgeranyl pyrophosphate synthetase; polyprenyl synthetase 2946765 4896633 Rsph17029_2796 Rhodobacter sphaeroides ATCC 17029 polyprenyl synthetase YP_001044670.1 2945896 R 349101 CDS YP_001044671.1 126463557 4896713 complement(2946762..2947001) 1 NC_009049.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: rsp:RSP_1136 exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 2947001 4896713 Rsph17029_2797 Rhodobacter sphaeroides ATCC 17029 exodeoxyribonuclease VII small subunit YP_001044671.1 2946762 R 349101 CDS YP_001044672.1 126463558 4896665 complement(2946998..2947972) 1 NC_009049.1 PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_1137 histone deacetylase family protein; histone deacetylase superfamily protein 2947972 4896665 Rsph17029_2798 Rhodobacter sphaeroides ATCC 17029 histone deacetylase superfamily protein YP_001044672.1 2946998 R 349101 CDS YP_001044673.1 126463559 4896718 complement(2948042..2948740) 1 NC_009049.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1138 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2948740 4896718 Rsph17029_2799 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001044673.1 2948042 R 349101 CDS YP_001044674.1 126463560 4896709 complement(2948737..2949246) 1 NC_009049.1 PFAM: regulatory protein, MarR; KEGG: rsp:RSP_1139 transcriptional regulator, MarR family; MarR family transcriptional regulator 2949246 4896709 Rsph17029_2800 Rhodobacter sphaeroides ATCC 17029 MarR family transcriptional regulator YP_001044674.1 2948737 R 349101 CDS YP_001044675.1 126463561 4896767 2949401..2950267 1 NC_009049.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2950267 4896767 Rsph17029_2801 Rhodobacter sphaeroides ATCC 17029 branched-chain amino acid aminotransferase YP_001044675.1 2949401 D 349101 CDS YP_001044676.1 126463562 4896785 complement(2950353..2950523) 1 NC_009049.1 KEGG: rsp:RSP_1141 hypothetical protein; hypothetical protein 2950523 4896785 Rsph17029_2802 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044676.1 2950353 R 349101 CDS YP_001044677.1 126463563 4896769 complement(2950762..2950998) 1 NC_009049.1 KEGG: rsp:RSP_1142 hypothetical membrane protein; hypothetical protein 2950998 4896769 Rsph17029_2803 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044677.1 2950762 R 349101 CDS YP_001044678.1 126463564 4896787 complement(2951026..2952072) 1 NC_009049.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: rsp:RSP_1143 4Fe-4S ferredoxin, iron-sulfur cluster binding protein; hypothetical protein 2952072 4896787 Rsph17029_2804 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044678.1 2951026 R 349101 CDS YP_001044679.1 126463565 4896786 complement(2952132..2952809) 1 NC_009049.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rsp:RSP_1144 glutathione S-transferase; glutathione S-transferase domain-containing protein 2952809 4896786 Rsph17029_2805 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase domain-containing protein YP_001044679.1 2952132 R 349101 CDS YP_001044680.1 126463566 4896820 complement(2952878..2953618) 1 NC_009049.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase, family 51; KEGG: rsp:RSP_1145 peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 2953618 4896820 Rsph17029_2806 Rhodobacter sphaeroides ATCC 17029 monofunctional biosynthetic peptidoglycan transglycosylase YP_001044680.1 2952878 R 349101 CDS YP_001044681.1 126463567 4896839 complement(2953872..2958410) 1 NC_009049.1 PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rsp:RSP_1146 glutamine-pyruvate aminotransferase; glutamate synthase 2958410 4896839 Rsph17029_2807 Rhodobacter sphaeroides ATCC 17029 glutamate synthase YP_001044681.1 2953872 R 349101 CDS YP_001044682.1 126463568 4896850 complement(2958414..2958851) 1 NC_009049.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_1147 hypothetical protein; glutathione-dependent formaldehyde-activating protein 2958851 4896850 Rsph17029_2808 Rhodobacter sphaeroides ATCC 17029 glutathione-dependent formaldehyde-activating protein YP_001044682.1 2958414 R 349101 CDS YP_001044683.1 126463569 4896915 complement(2958841..2959575) 1 NC_009049.1 KEGG: rsp:RSP_1148 hypothetical protein; hypothetical protein 2959575 4896915 Rsph17029_2809 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044683.1 2958841 R 349101 CDS YP_001044684.1 126463570 4896913 complement(2959665..2961092) 1 NC_009049.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 2961092 4896913 Rsph17029_2810 Rhodobacter sphaeroides ATCC 17029 putative oxidoreductase YP_001044684.1 2959665 R 349101 CDS YP_001044685.1 126463571 4897063 complement(2961257..2962063) 1 NC_009049.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2962063 4897063 Rsph17029_2811 Rhodobacter sphaeroides ATCC 17029 undecaprenyl pyrophosphate phosphatase YP_001044685.1 2961257 R 349101 CDS YP_001044686.1 126463572 4897068 complement(2962096..2963082) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: rsp:RSP_1151 NADH-ubiquinone oxidoreductase; NAD-dependent epimerase/dehydratase 2963082 4897068 Rsph17029_2812 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001044686.1 2962096 R 349101 CDS YP_001044687.1 126463573 4895857 2963352..2963966 1 NC_009049.1 PFAM: 3'-5' exonuclease; KEGG: rsp:RSP_1152 ribonuclease D; 3'-5' exonuclease 2963966 4895857 Rsph17029_2813 Rhodobacter sphaeroides ATCC 17029 3'-5' exonuclease YP_001044687.1 2963352 D 349101 CDS YP_001044688.1 126463574 4897092 2963947..2964912 1 NC_009049.1 KEGG: rsp:RSP_1153 sugar phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 2964912 4897092 Rsph17029_2814 Rhodobacter sphaeroides ATCC 17029 KpsF/GutQ family protein YP_001044688.1 2963947 D 349101 CDS YP_001044689.1 126463575 4897388 2964916..2965530 1 NC_009049.1 PFAM: protein of unknown function DUF1239; KEGG: rsp:RSP_1154 hypothetical protein; hypothetical protein 2965530 4897388 Rsph17029_2815 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044689.1 2964916 D 349101 CDS YP_001044690.1 126463576 4897072 2965554..2966045 1 NC_009049.1 PFAM: OstA family protein; KEGG: rsp:RSP_1155 OstA-like protein; OstA family protein 2966045 4897072 Rsph17029_2816 Rhodobacter sphaeroides ATCC 17029 OstA family protein YP_001044690.1 2965554 D 349101 CDS YP_001044691.1 126463577 4897157 2966042..2966803 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1156 ABC transporter, ATPase subunit; ABC transporter 2966803 4897157 Rsph17029_2817 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044691.1 2966042 D 349101 CDS YP_001044692.1 126463578 4895316 2967029..2967604 1 NC_009049.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rsp:RSP_1157 ribosomal subunit interface protein Y; sigma 54 modulation protein/ribosomal protein S30EA 2967604 4895316 Rsph17029_2818 Rhodobacter sphaeroides ATCC 17029 sigma 54 modulation protein/ribosomal protein S30EA YP_001044692.1 2967029 D 349101 CDS YP_001044693.1 126463579 4897208 2967638..2968102 1 NC_009049.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: rsp:RSP_1158 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2968102 4897208 Rsph17029_2819 Rhodobacter sphaeroides ATCC 17029 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001044693.1 2967638 D 349101 CDS YP_001044694.1 126463580 4897235 complement(2968512..2969405) 1 NC_009049.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_1159 UDP-glucose pyrophosphate; UTP-glucose-1-phosphate uridylyltransferase GalU 2969405 4897235 Rsph17029_2820 Rhodobacter sphaeroides ATCC 17029 UTP-glucose-1-phosphate uridylyltransferase GalU YP_001044694.1 2968512 R 349101 CDS YP_001044695.1 126463581 4897263 complement(2969819..2970616) 1 NC_009049.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2970616 4897263 Rsph17029_2821 Rhodobacter sphaeroides ATCC 17029 3-deoxy-manno-octulosonate cytidylyltransferase YP_001044695.1 2969819 R 349101 CDS YP_001044696.1 126463582 4897257 complement(2970651..2971445) 1 NC_009049.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: rsp:RSP_1161 3'-phosphadenosine 5'-phosphosulfate 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase 2971445 4897257 Rsph17029_2822 Rhodobacter sphaeroides ATCC 17029 3'(2'),5'-bisphosphate nucleotidase YP_001044696.1 2970651 R 349101 CDS YP_001044697.1 126463583 4897070 2971710..2972324 1 NC_009049.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2972324 4897070 Rsph17029_2823 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044697.1 2971710 D 349101 CDS YP_001044698.1 126463584 4897290 2972361..2973968 1 NC_009049.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2973968 nusA 4897290 nusA Rhodobacter sphaeroides ATCC 17029 transcription elongation factor NusA YP_001044698.1 2972361 D 349101 CDS YP_001044699.1 126463585 4897283 2974007..2974615 1 NC_009049.1 PFAM: protein of unknown function DUF448; KEGG: rsp:RSP_1164 hypothetical protein; hypothetical protein 2974615 4897283 Rsph17029_2825 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044699.1 2974007 D 349101 CDS YP_001044700.1 126463586 4897399 2974612..2977122 1 NC_009049.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2977122 infB 4897399 infB Rhodobacter sphaeroides ATCC 17029 translation initiation factor IF-2 YP_001044700.1 2974612 D 349101 CDS YP_001044701.1 126463587 4897292 complement(2977234..2977374) 1 NC_009049.1 hypothetical protein 2977374 4897292 Rsph17029_2827 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044701.1 2977234 R 349101 CDS YP_001044702.1 126463588 4897334 complement(2977511..2977909) 1 NC_009049.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: rsp:RSP_1166 NTP pyrophosphohydrolase; mutator MutT protein 2977909 4897334 Rsph17029_2828 Rhodobacter sphaeroides ATCC 17029 mutator MutT protein YP_001044702.1 2977511 R 349101 CDS YP_001044703.1 126463589 4897331 complement(2977906..2979243) 1 NC_009049.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 2979243 argJ 4897331 argJ Rhodobacter sphaeroides ATCC 17029 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001044703.1 2977906 R 349101 CDS YP_001044704.1 126463590 4897329 complement(2979266..2980120) 1 NC_009049.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rsp:RSP_1168 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2980120 4897329 Rsph17029_2830 Rhodobacter sphaeroides ATCC 17029 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001044704.1 2979266 R 349101 CDS YP_001044705.1 126463591 4897323 2980320..2983046 1 NC_009049.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2983046 4897323 Rsph17029_2831 Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecA YP_001044705.1 2980320 D 349101 CDS YP_001044706.1 126463592 4897341 2983161..2984699 1 NC_009049.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1170 OmpA family protein; OmpA/MotB domain-containing protein 2984699 4897341 Rsph17029_2832 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001044706.1 2983161 D 349101 CDS YP_001044707.1 126463593 4897339 complement(2984770..2985441) 1 NC_009049.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2985441 radC 4897339 radC Rhodobacter sphaeroides ATCC 17029 DNA repair protein RadC YP_001044707.1 2984770 R 349101 CDS YP_001044708.1 126463594 4897390 complement(2985709..2986857) 1 NC_009049.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2986857 4897390 Rsph17029_2834 Rhodobacter sphaeroides ATCC 17029 chaperone protein DnaJ YP_001044708.1 2985709 R 349101 CDS YP_001044709.1 126463595 4897352 complement(2986930..2988840) 1 NC_009049.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2988840 dnaK 4897352 dnaK Rhodobacter sphaeroides ATCC 17029 molecular chaperone DnaK YP_001044709.1 2986930 R 349101 CDS YP_001044710.1 126463596 4897366 complement(2989052..2990017) 1 NC_009049.1 KEGG: rsp:RSP_1174 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 2990017 4897366 Rsph17029_2836 Rhodobacter sphaeroides ATCC 17029 proline iminopeptidase YP_001044710.1 2989052 R 349101 CDS YP_001044711.1 126463597 4897365 2990079..2990822 1 NC_009049.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2990822 4897365 Rsph17029_2837 Rhodobacter sphaeroides ATCC 17029 3-demethylubiquinone-9 3-methyltransferase YP_001044711.1 2990079 D 349101 CDS YP_001044712.1 126463598 4897392 complement(2990864..2992165) 1 NC_009049.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 2992165 4897392 Rsph17029_2838 Rhodobacter sphaeroides ATCC 17029 xylose isomerase YP_001044712.1 2990864 R 349101 CDS YP_001044713.1 126463599 4897391 complement(2992162..2993598) 1 NC_009049.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_1177 xylulose kinase; xylulokinase 2993598 4897391 Rsph17029_2839 Rhodobacter sphaeroides ATCC 17029 xylulokinase YP_001044713.1 2992162 R 349101 CDS YP_001044714.1 126463600 4897419 complement(2993598..2994380) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1178 ABC sugar (xylose) transporter, ATPase subunit; ABC transporter 2994380 4897419 Rsph17029_2840 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044714.1 2993598 R 349101 CDS YP_001044715.1 126463601 4897411 complement(2994377..2995675) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_1179 ABC sugar (xylose) transporter, inner membrane subunit; inner-membrane translocator 2995675 4897411 Rsph17029_2841 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001044715.1 2994377 R 349101 CDS YP_001044716.1 126463602 4897432 complement(2995763..2996788) 1 NC_009049.1 TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; KEGG: rsp:RSP_1180 ABC sugar (xylose) transporter, periplasmic binding protein; D-xylose ABC transporter periplasmic substrate-binding protein 2996788 4897432 Rsph17029_2842 Rhodobacter sphaeroides ATCC 17029 D-xylose ABC transporter periplasmic substrate-binding protein YP_001044716.1 2995763 R 349101 CDS YP_001044717.1 126463603 4897439 2996980..2998257 1 NC_009049.1 PFAM: ROK family protein; KEGG: rsp:RSP_1181 xylose operon repressor; ROK family protein 2998257 4897439 Rsph17029_2843 Rhodobacter sphaeroides ATCC 17029 ROK family protein YP_001044717.1 2996980 D 349101 CDS YP_001044718.1 126463604 4897452 2998446..3000269 1 NC_009049.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rsp:RSP_1182 putative outer membrane protein; surface antigen (D15) 3000269 4897452 Rsph17029_2844 Rhodobacter sphaeroides ATCC 17029 surface antigen (D15) YP_001044718.1 2998446 D 349101 CDS YP_001044719.1 126463605 4897454 3000269..3004099 1 NC_009049.1 PFAM: protein of unknown function DUF490; KEGG: rsp:RSP_1183 hypothetical protein; hypothetical protein 3004099 4897454 Rsph17029_2845 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044719.1 3000269 D 349101 CDS YP_001044720.1 126463606 4897472 complement(3004266..3005102) 1 NC_009049.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rsp:RSP_1184 ribonuclease BN; putative ribonuclease BN 3005102 4897472 Rsph17029_2846 Rhodobacter sphaeroides ATCC 17029 putative ribonuclease BN YP_001044720.1 3004266 R 349101 CDS YP_001044721.1 126463607 4897465 complement(3005177..3005407) 1 NC_009049.1 hypothetical protein 3005407 4897465 Rsph17029_2847 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044721.1 3005177 R 349101 CDS YP_001044722.1 126463608 4897490 complement(3005496..3006158) 1 NC_009049.1 KEGG: rsp:RSP_1186 hypothetical protein; hypothetical protein 3006158 4897490 Rsph17029_2848 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044722.1 3005496 R 349101 CDS YP_001044723.1 126463609 4897423 complement(3006158..3008326) 1 NC_009049.1 PFAM: protein of unknown function DUF940, membrane lipoprotein putative; KEGG: rsp:RSP_1187 hypothetical protein; hypothetical protein 3008326 4897423 Rsph17029_2849 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044723.1 3006158 R 349101 CDS YP_001044724.1 126463610 4897487 complement(3008402..3010369) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_1188 nucleotide sugar epimerase/dehydratase; polysaccharide biosynthesis protein CapD 3010369 4897487 Rsph17029_2850 Rhodobacter sphaeroides ATCC 17029 polysaccharide biosynthesis protein CapD YP_001044724.1 3008402 R 349101 CDS YP_001044725.1 126463611 4897517 complement(3010436..3011095) 1 NC_009049.1 PFAM: sugar transferase; KEGG: rsp:RSP_1189 sugar transferase; sugar transferase 3011095 4897517 Rsph17029_2851 Rhodobacter sphaeroides ATCC 17029 sugar transferase YP_001044725.1 3010436 R 349101 CDS YP_001044726.1 126463612 4897507 complement(3011077..3011910) 1 NC_009049.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: rsp:RSP_1190 hypothetical protein; NAD-dependent epimerase/dehydratase 3011910 4897507 Rsph17029_2852 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001044726.1 3011077 R 349101 CDS YP_001044727.1 126463613 4897501 complement(3011910..3012353) 1 NC_009049.1 PFAM: regulatory protein, MarR; KEGG: rsp:RSP_1191 transcriptional regulator, MarR family; MarR family transcriptional regulator 3012353 4897501 Rsph17029_2853 Rhodobacter sphaeroides ATCC 17029 MarR family transcriptional regulator YP_001044727.1 3011910 R 349101 CDS YP_001044728.1 126463614 4897537 complement(3012353..3013183) 1 NC_009049.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sil:SPO0069 hydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3013183 4897537 Rsph17029_2854 Rhodobacter sphaeroides ATCC 17029 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001044728.1 3012353 R 349101 CDS YP_001044729.1 126463615 4897522 complement(3013188..3013445) 1 NC_009049.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 2; KEGG: rsp:RSP_1194 glutaredoxin; glutaredoxin 3 3013445 4897522 Rsph17029_2855 Rhodobacter sphaeroides ATCC 17029 glutaredoxin 3 YP_001044729.1 3013188 R 349101 CDS YP_001044730.1 126463616 4897533 complement(3013481..3014203) 1 NC_009049.1 KEGG: rsp:RSP_1195 competence protein F; competence protein F 3014203 4897533 Rsph17029_2856 Rhodobacter sphaeroides ATCC 17029 competence protein F YP_001044730.1 3013481 R 349101 CDS YP_001044731.1 126463617 4897532 3014236..3015048 1 NC_009049.1 KEGG: rsp:RSP_1196 SAM-dependent methyltransferase; SAM-dependent methyltransferase 3015048 4897532 Rsph17029_2857 Rhodobacter sphaeroides ATCC 17029 SAM-dependent methyltransferase YP_001044731.1 3014236 D 349101 CDS YP_001044732.1 126463618 4897575 3015086..3016219 1 NC_009049.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3016219 hemH 4897575 hemH Rhodobacter sphaeroides ATCC 17029 ferrochelatase YP_001044732.1 3015086 D 349101 CDS YP_001044733.1 126463619 4897560 complement(3016386..3016562) 1 NC_009049.1 hypothetical protein 3016562 4897560 Rsph17029_2859 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044733.1 3016386 R 349101 CDS YP_001044734.1 126463620 4897588 complement(3016711..3017313) 1 NC_009049.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_1199 secreted conserved hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3017313 4897588 Rsph17029_2860 Rhodobacter sphaeroides ATCC 17029 ErfK/YbiS/YcfS/YnhG family protein YP_001044734.1 3016711 R 349101 CDS YP_001044735.1 126463621 4897587 3017491..3018030 1 NC_009049.1 PFAM: Allergen V5/Tpx-1 family protein; KEGG: rsp:RSP_1200 hypothetical protein; Allergen V5/Tpx-1 family protein 3018030 4897587 Rsph17029_2861 Rhodobacter sphaeroides ATCC 17029 Allergen V5/Tpx-1 family protein YP_001044735.1 3017491 D 349101 CDS YP_001044736.1 126463622 4897632 complement(3018080..3018574) 1 NC_009049.1 KEGG: rsp:RSP_1201 hypothetical protein; hypothetical protein 3018574 4897632 Rsph17029_2862 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044736.1 3018080 R 349101 CDS YP_001044737.1 126463623 4897629 complement(3018678..3019892) 1 NC_009049.1 KEGG: rsp:RSP_1202 putative RNA SAM-dependent methyltransferase, TrmA family; RNA SAM-dependent methyltransferase 3019892 4897629 Rsph17029_2863 Rhodobacter sphaeroides ATCC 17029 RNA SAM-dependent methyltransferase YP_001044737.1 3018678 R 349101 CDS YP_001044738.1 126463624 4897611 complement(3019889..3021733) 1 NC_009049.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1203 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; ABC transporter 3021733 4897611 Rsph17029_2864 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044738.1 3019889 R 349101 CDS YP_001044739.1 126463625 4897644 complement(3021730..3023574) 1 NC_009049.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1204 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; ABC transporter 3023574 4897644 Rsph17029_2865 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044739.1 3021730 R 349101 CDS YP_001044740.1 126463626 4897639 complement(3023637..3024779) 1 NC_009049.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: rsp:RSP_1205 poly A polymerase family protein; polynucleotide adenylyltransferase 3024779 4897639 Rsph17029_2866 Rhodobacter sphaeroides ATCC 17029 polynucleotide adenylyltransferase YP_001044740.1 3023637 R 349101 CDS YP_001044741.1 126463627 4897594 complement(3024776..3025363) 1 NC_009049.1 PFAM: NUDIX hydrolase; KEGG: rsp:RSP_1206 putative phosphohydrolase (MutT/NUDIX family protein); NUDIX hydrolase 3025363 4897594 Rsph17029_2867 Rhodobacter sphaeroides ATCC 17029 NUDIX hydrolase YP_001044741.1 3024776 R 349101 CDS YP_001044742.1 126463628 4897653 complement(3025356..3026345) 1 NC_009049.1 PFAM: Hsp33 protein; KEGG: rsp:RSP_1207 putative HSP33 protein; Hsp33 protein 3026345 4897653 Rsph17029_2868 Rhodobacter sphaeroides ATCC 17029 Hsp33 protein YP_001044742.1 3025356 R 349101 CDS YP_001044743.1 126463629 4897652 3026418..3026855 1 NC_009049.1 PFAM: NUDIX hydrolase; KEGG: rsp:RSP_1208 NUDIX hydrolase; NUDIX hydrolase 3026855 4897652 Rsph17029_2869 Rhodobacter sphaeroides ATCC 17029 NUDIX hydrolase YP_001044743.1 3026418 D 349101 CDS YP_001044744.1 126463630 4897719 complement(3026883..3028139) 1 NC_009049.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rsp:RSP_1210 response regulator receiver protein; response regulator receiver protein 3028139 4897719 Rsph17029_2870 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001044744.1 3026883 R 349101 CDS YP_001044745.1 126463631 4897681 3028397..3028654 1 NC_009049.1 PFAM: Hpt domain protein; KEGG: rsp:RSP_6148 putative HPT, histidine phosphotransfer domain; Hpt protein 3028654 4897681 Rsph17029_2871 Rhodobacter sphaeroides ATCC 17029 Hpt protein YP_001044745.1 3028397 D 349101 CDS YP_001044746.1 126463632 4897901 complement(3028651..3029898) 1 NC_009049.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 3029898 4897901 Rsph17029_2872 Rhodobacter sphaeroides ATCC 17029 threonine dehydratase YP_001044746.1 3028651 R 349101 CDS YP_001044747.1 126463633 4897689 3030020..3031246 1 NC_009049.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3031246 4897689 Rsph17029_2873 Rhodobacter sphaeroides ATCC 17029 argininosuccinate synthase YP_001044747.1 3030020 D 349101 CDS YP_001044748.1 126463634 4897684 3031310..3031987 1 NC_009049.1 PFAM: protein of unknown function DUF533; KEGG: rsp:RSP_1213 hypothetical protein; hypothetical protein 3031987 4897684 Rsph17029_2874 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044748.1 3031310 D 349101 CDS YP_001044749.1 126463635 4897697 complement(3031977..3032687) 1 NC_009049.1 KEGG: rsp:RSP_1214 putative branched-chain amino acid aminotransferase; putative branched-chain amino acid aminotransferase 3032687 4897697 Rsph17029_2875 Rhodobacter sphaeroides ATCC 17029 putative branched-chain amino acid aminotransferase YP_001044749.1 3031977 R 349101 CDS YP_001044750.1 126463636 4897274 complement(3032696..3033595) 1 NC_009049.1 PFAM: aminotransferase, class IV; KEGG: rsp:RSP_1215 putative IlvE, branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; aminotransferase, class IV 3033595 4897274 Rsph17029_2876 Rhodobacter sphaeroides ATCC 17029 aminotransferase, class IV YP_001044750.1 3032696 R 349101 CDS YP_001044751.1 126463637 4897694 complement(3033662..3034516) 1 NC_009049.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_1216 putative RbsK, carbohydrate kinase, ribokinase family; ribokinase-like domain-containing protein 3034516 4897694 Rsph17029_2877 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001044751.1 3033662 R 349101 CDS YP_001044752.1 126463638 4897700 complement(3034516..3036771) 1 NC_009049.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3036771 4897700 Rsph17029_2878 Rhodobacter sphaeroides ATCC 17029 malic enzyme YP_001044752.1 3034516 R 349101 CDS YP_001044753.1 126463639 4897705 3036888..3039530 1 NC_009049.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3039530 4897705 Rsph17029_2879 Rhodobacter sphaeroides ATCC 17029 DNA mismatch repair protein MutS YP_001044753.1 3036888 D 349101 CDS YP_001044754.1 126463640 4897714 complement(3039641..3040201) 1 NC_009049.1 PFAM: GrpE protein; KEGG: rsp:RSP_1219 putative chaperone protein GrpE (heat shock protein); Fis family transcriptional regulator 3040201 4897714 Rsph17029_2880 Rhodobacter sphaeroides ATCC 17029 Fis family transcriptional regulator YP_001044754.1 3039641 R 349101 CDS YP_001044755.1 126463641 4897839 complement(3040207..3041247) 1 NC_009049.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 3041247 hrcA 4897839 hrcA Rhodobacter sphaeroides ATCC 17029 heat-inducible transcription repressor YP_001044755.1 3040207 R 349101 CDS YP_001044756.1 126463642 4897732 3041411..3042124 1 NC_009049.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3042124 rph 4897732 rph Rhodobacter sphaeroides ATCC 17029 ribonuclease PH YP_001044756.1 3041411 D 349101 CDS YP_001044757.1 126463643 4897726 3042121..3042732 1 NC_009049.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 3042732 4897726 Rsph17029_2883 Rhodobacter sphaeroides ATCC 17029 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001044757.1 3042121 D 349101 CDS YP_001044758.1 126463644 4897725 3042729..3043103 1 NC_009049.1 PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_1223 putative translation initiation inhibitor, YjgF family / putative endoribonuclease L-PSP; endoribonuclease L-PSP 3043103 4897725 Rsph17029_2884 Rhodobacter sphaeroides ATCC 17029 endoribonuclease L-PSP YP_001044758.1 3042729 D 349101 CDS YP_001044759.1 126463645 4897735 3043106..3044263 1 NC_009049.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3044263 4897735 Rsph17029_2885 Rhodobacter sphaeroides ATCC 17029 coproporphyrinogen III oxidase YP_001044759.1 3043106 D 349101 CDS YP_001044760.1 126463646 4897213 3044265..3044618 1 NC_009049.1 PFAM: protein of unknown function DUF454; KEGG: rsp:RSP_1226 hypothetical protein; hypothetical protein 3044618 4897213 Rsph17029_2886 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044760.1 3044265 D 349101 CDS YP_001044761.1 126463647 4897759 complement(3044593..3045483) 1 NC_009049.1 TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_1225 ParB-like partition protein; parB-like partition proteins 3045483 4897759 Rsph17029_2887 Rhodobacter sphaeroides ATCC 17029 parB-like partition proteins YP_001044761.1 3044593 R 349101 CDS YP_001044762.1 126463648 4897746 complement(3045495..3046319) 1 NC_009049.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rsp:RSP_1227 putative chromosome partitioning protein, ParA; cobyrinic acid a,c-diamide synthase 3046319 4897746 Rsph17029_2888 Rhodobacter sphaeroides ATCC 17029 cobyrinic acid a,c-diamide synthase YP_001044762.1 3045495 R 349101 CDS YP_001044763.1 126463649 4897775 complement(3046312..3046932) 1 NC_009049.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: rsp:RSP_1228 putative GidB, glucose inhibited division protein; methyltransferase GidB 3046932 4897775 Rsph17029_2889 Rhodobacter sphaeroides ATCC 17029 methyltransferase GidB YP_001044763.1 3046312 R 349101 CDS YP_001044764.1 126463650 4897864 complement(3046929..3048794) 1 NC_009049.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3048794 4897864 Rsph17029_2890 Rhodobacter sphaeroides ATCC 17029 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001044764.1 3046929 R 349101 CDS YP_001044765.1 126463651 4897768 complement(3048806..3050092) 1 NC_009049.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 3050092 trmE 4897768 trmE Rhodobacter sphaeroides ATCC 17029 tRNA modification GTPase TrmE YP_001044765.1 3048806 R 349101 CDS YP_001044766.1 126463652 4897792 complement(3050118..3051386) 1 NC_009049.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3051386 rho 4897792 rho Rhodobacter sphaeroides ATCC 17029 transcription termination factor Rho YP_001044766.1 3050118 R 349101 CDS YP_001044767.1 126463653 4897965 complement(3051528..3052025) 1 NC_009049.1 PFAM: conserved hypothetical protein 701; KEGG: rsp:RSP_1232 putative integral membrane protein; hypothetical protein 3052025 4897965 Rsph17029_2893 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044767.1 3051528 R 349101 CDS YP_001044768.1 126463654 4897852 3052408..3053001 1 NC_009049.1 PFAM: Maf family protein; KEGG: rsp:RSP_1233 putative Maf/YceF/YhdE family protein; Maf family protein 3053001 4897852 Rsph17029_2894 Rhodobacter sphaeroides ATCC 17029 Maf family protein YP_001044768.1 3052408 D 349101 CDS YP_001044769.1 126463655 4897848 3052998..3053837 1 NC_009049.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3053837 aroE 4897848 aroE Rhodobacter sphaeroides ATCC 17029 shikimate 5-dehydrogenase YP_001044769.1 3052998 D 349101 CDS YP_001044770.1 126463656 4897882 3053834..3054427 1 NC_009049.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3054427 coaE 4897882 coaE Rhodobacter sphaeroides ATCC 17029 dephospho-CoA kinase YP_001044770.1 3053834 D 349101 CDS YP_001044771.1 126463657 4897909 3054420..3055109 1 NC_009049.1 KEGG: rsp:RSP_1236 putative DNA polymerase III, epsilon subunit and related 3'-5' exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 3055109 4897909 Rsph17029_2897 Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit epsilon YP_001044771.1 3054420 D 349101 CDS YP_001044772.1 126463658 4897176 complement(3055113..3055613) 1 NC_009049.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 3055613 4897176 Rsph17029_2898 Rhodobacter sphaeroides ATCC 17029 preprotein translocase subunit SecB YP_001044772.1 3055113 R 349101 CDS YP_001044773.1 126463659 4897883 complement(3055674..3056150) 1 NC_009049.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: rsp:RSP_1238 putative FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 3056150 4897883 Rsph17029_2899 Rhodobacter sphaeroides ATCC 17029 FxsA cytoplasmic membrane protein YP_001044773.1 3055674 R 349101 CDS YP_001044774.1 126463660 4897867 3056294..3056953 1 NC_009049.1 PFAM: import inner membrane translocase, subunit Tim44; KEGG: rsp:RSP_1239 hypothetical protein; import inner membrane translocase subunit Tim44 3056953 4897867 Rsph17029_2900 Rhodobacter sphaeroides ATCC 17029 import inner membrane translocase subunit Tim44 YP_001044774.1 3056294 D 349101 CDS YP_001044775.1 126463661 4897913 3056953..3057978 1 NC_009049.1 PFAM: MltA domain protein; 3D domain protein; KEGG: rsp:RSP_1240 putative membrane-bound lytic murein transglycosylase A transmembrane protein; MltA domain-containing protein 3057978 4897913 Rsph17029_2901 Rhodobacter sphaeroides ATCC 17029 MltA domain-containing protein YP_001044775.1 3056953 D 349101 CDS YP_001044776.1 126463662 4897897 3057978..3058574 1 NC_009049.1 PFAM: Smr protein/MutS2; KEGG: rsp:RSP_1241 putative Smr protein/MutS2; Smr protein/MutS2 3058574 4897897 Rsph17029_2902 Rhodobacter sphaeroides ATCC 17029 Smr protein/MutS2 YP_001044776.1 3057978 D 349101 CDS YP_001044777.1 126463663 4897892 complement(3058602..3059015) 1 NC_009049.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1242 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3059015 4897892 Rsph17029_2903 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001044777.1 3058602 R 349101 CDS YP_001044778.1 126463664 4897947 complement(3059012..3060031) 1 NC_009049.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1243 transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator 3060031 4897947 Rsph17029_2904 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001044778.1 3059012 R 349101 CDS YP_001044779.1 126463665 4897946 3060182..3061240 1 NC_009049.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_1244 putative IolE, sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 3061240 4897946 Rsph17029_2905 Rhodobacter sphaeroides ATCC 17029 xylose isomerase domain-containing protein YP_001044779.1 3060182 D 349101 CDS YP_001044780.1 126463666 4897981 3061237..3062382 1 NC_009049.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rsp:RSP_1245 predicted oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 3062382 4897981 Rsph17029_2906 Rhodobacter sphaeroides ATCC 17029 oxidoreductase domain-containing protein YP_001044780.1 3061237 D 349101 CDS YP_001044781.1 126463667 4897974 3062379..3063878 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1247 ABC sugar transporter, ATPase subunit; ABC transporter 3063878 4897974 Rsph17029_2907 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044781.1 3062379 D 349101 CDS YP_001044782.1 126463668 4897899 3063875..3064867 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_6150 ABC sugar (ribose) transporter, inner membrane subunit; inner-membrane translocator 3064867 4897899 Rsph17029_2908 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001044782.1 3063875 D 349101 CDS YP_001044783.1 126463669 4897985 3064886..3065848 1 NC_009049.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1249 ABC ribose transporter, periplasmic solute-binding protein; periplasmic binding protein/LacI transcriptional regulator 3065848 4897985 Rsph17029_2909 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001044783.1 3064886 D 349101 CDS YP_001044784.1 126463670 4897984 3066377..3066778 1 NC_009049.1 KEGG: rsp:RSP_6151 hypothetical protein; hypothetical protein 3066778 4897984 Rsph17029_2910 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044784.1 3066377 D 349101 CDS YP_001044785.1 126463671 4896990 3067075..3067353 1 NC_009049.1 hypothetical protein 3067353 4896990 Rsph17029_2911 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044785.1 3067075 D 349101 CDS YP_001044786.1 126463672 4897771 complement(3067409..3068350) 1 NC_009049.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rsp:RSP_1252 2-nitropropane dioxygenase-like protein; 2-nitropropane dioxygenase 3068350 4897771 Rsph17029_2912 Rhodobacter sphaeroides ATCC 17029 2-nitropropane dioxygenase YP_001044786.1 3067409 R 349101 CDS YP_001044787.1 126463673 4897082 3068450..3068914 1 NC_009049.1 KEGG: rsp:RSP_1253 hypothetical protein; hypothetical protein 3068914 4897082 Rsph17029_2913 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044787.1 3068450 D 349101 CDS YP_001044788.1 126463674 4895868 complement(3068995..3070185) 1 NC_009049.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rsp:RSP_1254 putative acetate kinase (acetokinase; acetate kinase 3070185 4895868 Rsph17029_2914 Rhodobacter sphaeroides ATCC 17029 acetate kinase YP_001044788.1 3068995 R 349101 CDS YP_001044789.1 126463675 4896992 complement(3070182..3071603) 1 NC_009049.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rsp:RSP_1255 phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 3071603 4896992 Rsph17029_2915 Rhodobacter sphaeroides ATCC 17029 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_001044789.1 3070182 R 349101 CDS YP_001044790.1 126463676 4896650 complement(3071590..3072348) 1 NC_009049.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 3072348 4896650 Rsph17029_2916 Rhodobacter sphaeroides ATCC 17029 enoyl-ACP reductase YP_001044790.1 3071590 R 349101 CDS YP_001044791.1 126463677 4895147 complement(3072361..3074082) 1 NC_009049.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rsp:RSP_1257 putative polyhydroxyalkanoic synthase, PHA synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein 3074082 4895147 Rsph17029_2917 Rhodobacter sphaeroides ATCC 17029 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_001044791.1 3072361 R 349101 CDS YP_001044792.1 126463678 4896126 3074389..3075327 1 NC_009049.1 PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_1258 putative hydrolase; alpha/beta hydrolase 3075327 4896126 Rsph17029_2918 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase YP_001044792.1 3074389 D 349101 CDS YP_001044793.1 126463679 4895315 3075409..3075612 1 NC_009049.1 KEGG: rsp:RSP_1259 hypothetical protein; hypothetical protein 3075612 4895315 Rsph17029_2919 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044793.1 3075409 D 349101 CDS YP_001044794.1 126463680 4897878 3075668..3076129 1 NC_009049.1 KEGG: rsp:RSP_1260 hypothetical protein; hypothetical protein 3076129 4897878 Rsph17029_2920 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044794.1 3075668 D 349101 CDS YP_001044795.1 126463681 4896337 complement(3076176..3076598) 1 NC_009049.1 PFAM: BLUF domain protein; KEGG: rsp:RSP_1261 blue-light receptor of the BLUF-family; BLUF domain-containing protein 3076598 4896337 Rsph17029_2921 Rhodobacter sphaeroides ATCC 17029 BLUF domain-containing protein YP_001044795.1 3076176 R 349101 CDS YP_001044796.1 126463682 4895376 complement(3076670..3077257) 1 NC_009049.1 PFAM: response regulator receiver; KEGG: rsp:RSP_1262 response regulator receiver protein; response regulator receiver/SARP domain-containing protein 3077257 4895376 Rsph17029_2922 Rhodobacter sphaeroides ATCC 17029 response regulator receiver/SARP domain-containing protein YP_001044796.1 3076670 R 349101 CDS YP_001044797.1 126463683 4895294 3078081..3079736 1 NC_009049.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3079736 4895294 Rsph17029_2923 Rhodobacter sphaeroides ATCC 17029 potassium-transporting ATPase subunit A YP_001044797.1 3078081 D 349101 CDS YP_001044798.1 126463684 4895901 3079745..3081772 1 NC_009049.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_1266 potassium-transporting P-type ATPase, B chain, KdpB; K+-transporting ATPase subunit B 3081772 4895901 Rsph17029_2924 Rhodobacter sphaeroides ATCC 17029 K+-transporting ATPase subunit B YP_001044798.1 3079745 D 349101 CDS YP_001044799.1 126463685 4896052 3081785..3082342 1 NC_009049.1 KEGG: rsp:RSP_1267 potassium-transporting P-type ATPase C chain, KdpC; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+ transporting ATPase, KdpC subunit; potassium-transporting ATPase subunit C 3082342 4896052 Rsph17029_2925 Rhodobacter sphaeroides ATCC 17029 potassium-transporting ATPase subunit C YP_001044799.1 3081785 D 349101 CDS YP_001044800.1 126463686 4897691 3082346..3085009 1 NC_009049.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: rsp:RSP_1268 osmosensitive K+ channel histidine kinase; osmosensitive K+ channel signal transduction histidine kinase 3085009 4897691 Rsph17029_2926 Rhodobacter sphaeroides ATCC 17029 osmosensitive K+ channel signal transduction histidine kinase YP_001044800.1 3082346 D 349101 CDS YP_001044801.1 126463687 4897731 3085006..3085692 1 NC_009049.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1269 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3085692 4897731 Rsph17029_2927 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001044801.1 3085006 D 349101 CDS YP_001044802.1 126463688 4896795 complement(3085769..3085966) 1 NC_009049.1 PFAM: CsbD family protein; KEGG: rsp:RSP_1270 hypothetical protein; CsbD family protein 3085966 4896795 Rsph17029_2928 Rhodobacter sphaeroides ATCC 17029 CsbD family protein YP_001044802.1 3085769 R 349101 CDS YP_001044803.1 126463689 4895934 complement(3086072..3087853) 1 NC_009049.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_1271 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase 3087853 4895934 Rsph17029_2929 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase YP_001044803.1 3086072 R 349101 CDS YP_001044804.1 126463690 4895919 complement(3087850..3088434) 1 NC_009049.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3088434 4895919 Rsph17029_2930 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma factor YP_001044804.1 3087850 R 349101 CDS YP_001044805.1 126463691 4897774 complement(3088431..3088637) 1 NC_009049.1 KEGG: rsp:RSP_1273 hypothetical protein; hypothetical protein 3088637 4897774 Rsph17029_2931 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044805.1 3088431 R 349101 CDS YP_001044806.1 126463692 4897861 3088740..3089549 1 NC_009049.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3089549 4897861 Rsph17029_2932 Rhodobacter sphaeroides ATCC 17029 two-component response regulator YP_001044806.1 3088740 D 349101 CDS YP_001044807.1 126463693 4896618 complement(3089563..3089922) 1 NC_009049.1 KEGG: rsp:RSP_6152 hypothetical protein; hypothetical protein 3089922 4896618 Rsph17029_2933 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044807.1 3089563 R 349101 CDS YP_001044808.1 126463694 4896951 3089997..3090746 1 NC_009049.1 PFAM: cyclic nucleotide-binding; KEGG: rsp:RSP_1275 Crp-Fnr family transciptional regulator; cyclic nucleotide-binding protein 3090746 4896951 Rsph17029_2934 Rhodobacter sphaeroides ATCC 17029 cyclic nucleotide-binding protein YP_001044808.1 3089997 D 349101 CDS YP_001044809.1 126463695 4896926 3090844..3091338 1 NC_009049.1 KEGG: rsp:RSP_1276 hypothetical protein; hypothetical protein 3091338 4896926 Rsph17029_2935 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044809.1 3090844 D 349101 CDS YP_001044810.1 126463696 4896072 complement(3091641..3092897) 1 NC_009049.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: rsp:RSP_1277 hypothetical protein; N-acylglucosamine 2-epimerase 3092897 4896072 Rsph17029_2936 Rhodobacter sphaeroides ATCC 17029 N-acylglucosamine 2-epimerase YP_001044810.1 3091641 R 349101 CDS YP_001044811.1 126463697 4896146 complement(3092945..3093601) 1 NC_009049.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 3093601 4896146 Rsph17029_2937 Rhodobacter sphaeroides ATCC 17029 phosphoglycolate phosphatase YP_001044811.1 3092945 R 349101 CDS YP_001044812.1 126463698 4895371 complement(3093601..3094293) 1 NC_009049.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_1279 CbbY family protein; HAD family hydrolase 3094293 4895371 Rsph17029_2938 Rhodobacter sphaeroides ATCC 17029 HAD family hydrolase YP_001044812.1 3093601 R 349101 CDS YP_001044813.1 126463699 4896275 complement(3094290..3095219) 1 NC_009049.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1280 CbbX protein; ATPase central domain-containing protein 3095219 4896275 Rsph17029_2939 Rhodobacter sphaeroides ATCC 17029 ATPase central domain-containing protein YP_001044813.1 3094290 R 349101 CDS YP_001044814.1 126463700 4896147 complement(3095390..3095779) 1 NC_009049.1 PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: rsp:RSP_1281 ribulose bisphosphate carboxylase, small subunit; ribulose-bisphosphate carboxylase 3095779 4896147 Rsph17029_2940 Rhodobacter sphaeroides ATCC 17029 ribulose-bisphosphate carboxylase YP_001044814.1 3095390 R 349101 CDS YP_001044815.1 126463701 4896035 complement(3095791..3097251) 1 NC_009049.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 3097251 rbcL 4896035 rbcL Rhodobacter sphaeroides ATCC 17029 ribulose bisophosphate carboxylase YP_001044815.1 3095791 R 349101 CDS YP_001044816.1 126463702 4895997 complement(3097266..3098345) 1 NC_009049.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 3098345 4895997 Rsph17029_2942 Rhodobacter sphaeroides ATCC 17029 fructose-1,6-bisphosphate aldolase YP_001044816.1 3097266 R 349101 CDS YP_001044817.1 126463703 4896345 complement(3098469..3099341) 1 NC_009049.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: rsp:RSP_1284 phosphoribulokinase; phosphoribulokinase 3099341 4896345 Rsph17029_2943 Rhodobacter sphaeroides ATCC 17029 phosphoribulokinase YP_001044817.1 3098469 R 349101 CDS YP_001044818.1 126463704 4896060 complement(3099348..3100349) 1 NC_009049.1 PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: rsp:RSP_1285 fructose-1,6-bisphosphatase I; inositol phosphatase/fructose-1,6-bisphosphatase 3100349 4896060 Rsph17029_2944 Rhodobacter sphaeroides ATCC 17029 inositol phosphatase/fructose-1,6-bisphosphatase YP_001044818.1 3099348 R 349101 CDS YP_001044819.1 126463705 4895382 3100440..3101372 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1286 RuBisCO operon transcriptional regulator, CbbR; LysR family transcriptional regulator 3101372 4895382 Rsph17029_2945 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044819.1 3100440 D 349101 CDS YP_001044820.1 126463706 4895878 complement(3101377..3102072) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1287 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter 3102072 4895878 Rsph17029_2946 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044820.1 3101377 R 349101 CDS YP_001044821.1 126463707 4895698 complement(3102074..3102775) 1 NC_009049.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1288 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter 3102775 4895698 Rsph17029_2947 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044821.1 3102074 R 349101 CDS YP_001044822.1 126463708 4895544 complement(3102772..3103704) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_1289 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 3103704 4895544 Rsph17029_2948 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001044822.1 3102772 R 349101 CDS YP_001044823.1 126463709 4897937 complement(3103701..3104579) 1 NC_009049.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_1290 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 3104579 4897937 Rsph17029_2949 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001044823.1 3103701 R 349101 CDS YP_001044824.1 126463710 4897728 complement(3104582..3105862) 1 NC_009049.1 KEGG: rsp:RSP_1291 ABC branched chain amino acid family transporter, periplasmic substrate binding protein; branched chain amino acid ABC transporter substrate-binding protein 3105862 4897728 Rsph17029_2950 Rhodobacter sphaeroides ATCC 17029 branched chain amino acid ABC transporter substrate-binding protein YP_001044824.1 3104582 R 349101 CDS YP_001044825.1 126463711 4895764 3106109..3106633 1 NC_009049.1 KEGG: rsp:RSP_6153 hypothetical protein; hypothetical protein 3106633 4895764 Rsph17029_2951 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044825.1 3106109 D 349101 CDS YP_001044826.1 126463712 4898096 complement(3106617..3108101) 1 NC_009049.1 PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_1292 putative aldehyde dehydrogenase; aldehyde dehydrogenase 3108101 4898096 Rsph17029_2952 Rhodobacter sphaeroides ATCC 17029 aldehyde dehydrogenase YP_001044826.1 3106617 R 349101 CDS YP_001044827.1 126463713 4897727 complement(3108098..3109132) 1 NC_009049.1 KEGG: rsp:RSP_1293 putative acyl-carrier protein; putative acyl-carrier protein 3109132 4897727 Rsph17029_2953 Rhodobacter sphaeroides ATCC 17029 putative acyl-carrier protein YP_001044827.1 3108098 R 349101 CDS YP_001044828.1 126463714 4895786 complement(3109129..3111312) 1 NC_009049.1 PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; KEGG: rsp:RSP_1294 possible 2-oxoisovalerate dehydrogenase; E1 component, alpha and beta subunit; transketolase, central region 3111312 4895786 Rsph17029_2954 Rhodobacter sphaeroides ATCC 17029 transketolase, central region YP_001044828.1 3109129 R 349101 CDS YP_001044829.1 126463715 4897900 complement(3111388..3112599) 1 NC_009049.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_1295 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3112599 4897900 Rsph17029_2955 Rhodobacter sphaeroides ATCC 17029 acyl-CoA dehydrogenase domain-containing protein YP_001044829.1 3111388 R 349101 CDS YP_001044830.1 126463716 4896211 3112679..3113593 1 NC_009049.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1297 transcriptional regulator, LysR family; LysR family transcriptional regulator 3113593 4896211 Rsph17029_2956 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044830.1 3112679 D 349101 CDS YP_001044831.1 126463717 4895855 complement(3113565..3114698) 1 NC_009049.1 KEGG: rsp:RSP_1296 putative N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 3114698 4895855 Rsph17029_2957 Rhodobacter sphaeroides ATCC 17029 N-acetylglucosamine-6-phosphate deacetylase YP_001044831.1 3113565 R 349101 CDS YP_001044832.1 126463718 4895699 3114820..3116754 1 NC_009049.1 KEGG: rsp:RSP_1299 putative binding domain; SARP family transcriptional regulator 3116754 4895699 Rsph17029_2958 Rhodobacter sphaeroides ATCC 17029 SARP family transcriptional regulator YP_001044832.1 3114820 D 349101 CDS YP_001044833.1 126463719 4895610 3116782..3117714 1 NC_009049.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: rsp:RSP_1300 hypothetical protein; PA-phosphatase-like phosphoesterase 3117714 4895610 Rsph17029_2959 Rhodobacter sphaeroides ATCC 17029 PA-phosphatase-like phosphoesterase YP_001044833.1 3116782 D 349101 CDS YP_001044834.1 126463720 4897678 3117716..3119386 1 NC_009049.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: rsp:RSP_1301 putative peptidase; peptidase S8/S53 subtilisin kexin sedolisin 3119386 4897678 Rsph17029_2960 Rhodobacter sphaeroides ATCC 17029 peptidase S8/S53 subtilisin kexin sedolisin YP_001044834.1 3117716 D 349101 CDS YP_001044835.1 126463721 4895608 3119517..3120410 1 NC_009049.1 KEGG: rsp:RSP_6154 hypothetical protein; hypothetical protein 3120410 4895608 Rsph17029_2961 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044835.1 3119517 D 349101 CDS YP_001044836.1 126463722 4897766 3120485..3121321 1 NC_009049.1 KEGG: rsp:RSP_1302 putative chemotaxis MotB protein; putative chemotaxis MotB protein 3121321 4897766 Rsph17029_2962 Rhodobacter sphaeroides ATCC 17029 putative chemotaxis MotB protein YP_001044836.1 3120485 D 349101 CDS YP_001044837.1 126463723 4897972 3121416..3122813 1 NC_009049.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_1303 putative flagellar hook protein; hypothetical protein 3122813 4897972 Rsph17029_2963 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044837.1 3121416 D 349101 CDS YP_001044838.1 126463724 4896350 3122826..3124271 1 NC_009049.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 3124271 flgK 4896350 flgK Rhodobacter sphaeroides ATCC 17029 flagellar hook-associated protein FlgK YP_001044838.1 3122826 D 349101 CDS YP_001044839.1 126463725 4895619 3124272..3125273 1 NC_009049.1 KEGG: rsp:RSP_1305 putative flagellar hook-associated protein; putative flagellar hook-associated protein 3125273 4895619 Rsph17029_2965 Rhodobacter sphaeroides ATCC 17029 putative flagellar hook-associated protein YP_001044839.1 3124272 D 349101 CDS YP_001044840.1 126463726 4895752 3125273..3126364 1 NC_009049.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3126364 flgI 4895752 flgI Rhodobacter sphaeroides ATCC 17029 flagellar basal body P-ring protein YP_001044840.1 3125273 D 349101 CDS YP_001044841.1 126463727 4896308 complement(3126340..3129189) 1 NC_009049.1 KEGG: rsp:RSP_1306 PAS sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 3129189 4896308 Rsph17029_2967 Rhodobacter sphaeroides ATCC 17029 PAS/PAC sensor hybrid histidine kinase YP_001044841.1 3126340 R 349101 CDS YP_001044842.1 126463728 4897976 3129253..3130335 1 NC_009049.1 KEGG: rsp:RSP_1308 hypothetical protein; hypothetical protein 3130335 4897976 Rsph17029_2968 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044842.1 3129253 D 349101 CDS YP_001044843.1 126463729 4895726 complement(3130326..3131042) 1 NC_009049.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3131042 fliP 4895726 fliP Rhodobacter sphaeroides ATCC 17029 flagellar biosynthesis protein FliP YP_001044843.1 3130326 R 349101 CDS YP_001044844.1 126463730 4896024 complement(3131042..3131308) 1 NC_009049.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: rsp:RSP_1310 putative flagellar motor switch protein FliN/FliY; surface presentation of antigens (SPOA) protein 3131308 4896024 Rsph17029_2970 Rhodobacter sphaeroides ATCC 17029 surface presentation of antigens (SPOA) protein YP_001044844.1 3131042 R 349101 CDS YP_001044845.1 126463731 4895375 complement(3131301..3131891) 1 NC_009049.1 KEGG: rsp:RSP_1311 putative flagellar biosynthesis/type III secretory pathway protein; putative flagellar biosynthesis/type III secretory pathway protein 3131891 4895375 Rsph17029_2971 Rhodobacter sphaeroides ATCC 17029 putative flagellar biosynthesis/type III secretory pathway protein YP_001044845.1 3131301 R 349101 CDS YP_001044846.1 126463732 4895795 complement(3131891..3133519) 1 NC_009049.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 3133519 fliF 4895795 fliF Rhodobacter sphaeroides ATCC 17029 flagellar MS-ring protein YP_001044846.1 3131891 R 349101 CDS YP_001044847.1 126463733 4895675 3133589..3134077 1 NC_009049.1 PFAM: flagellar basal body-associated protein FliL; KEGG: rsp:RSP_1313 possible flagellar synthesis protein; flagellar basal body-associated protein FliL 3134077 4895675 Rsph17029_2973 Rhodobacter sphaeroides ATCC 17029 flagellar basal body-associated protein FliL YP_001044847.1 3133589 D 349101 CDS YP_001044848.1 126463734 4895127 3134081..3134473 1 NC_009049.1 KEGG: rsp:RSP_1314 hypothetical protein; hypothetical protein 3134473 4895127 Rsph17029_2974 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044848.1 3134081 D 349101 CDS YP_001044849.1 126463735 4896262 3134470..3135027 1 NC_009049.1 KEGG: rsp:RSP_1315 hypothetical protein; hypothetical protein 3135027 4896262 Rsph17029_2975 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044849.1 3134470 D 349101 CDS YP_001044850.1 126463736 4895819 3135084..3135953 1 NC_009049.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3135953 4895819 Rsph17029_2976 Rhodobacter sphaeroides ATCC 17029 flagellar motor protein MotA YP_001044850.1 3135084 D 349101 CDS YP_001044851.1 126463737 4896047 3135950..3137908 1 NC_009049.1 KEGG: rsp:RSP_1318 hypothetical protein; hypothetical protein 3137908 4896047 Rsph17029_2977 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044851.1 3135950 D 349101 CDS YP_001044852.1 126463738 4895834 3138205..3138885 1 NC_009049.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_1319 possible invasion protein; lytic transglycosylase, catalytic 3138885 4895834 Rsph17029_2978 Rhodobacter sphaeroides ATCC 17029 lytic transglycosylase, catalytic YP_001044852.1 3138205 D 349101 CDS YP_001044853.1 126463739 4897742 3138889..3140955 1 NC_009049.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3140955 flhA 4897742 flhA Rhodobacter sphaeroides ATCC 17029 flagellar biosynthesis protein FlhA YP_001044853.1 3138889 D 349101 CDS YP_001044854.1 126463740 4896093 3140952..3141734 1 NC_009049.1 PFAM: type III secretion system inner membrane R protein; KEGG: rsp:RSP_1321 flagellar biosynthesis pathway, component FliR; type III secretion system inner membrane R protein 3141734 4896093 Rsph17029_2980 Rhodobacter sphaeroides ATCC 17029 type III secretion system inner membrane R protein YP_001044854.1 3140952 D 349101 CDS YP_001044855.1 126463741 4897734 3141731..3142810 1 NC_009049.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3142810 flhB 4897734 flhB Rhodobacter sphaeroides ATCC 17029 flagellar biosynthesis protein FlhB YP_001044855.1 3141731 D 349101 CDS YP_001044856.1 126463742 4897951 3142807..3143136 1 NC_009049.1 KEGG: rsp:RSP_6155 hypothetical protein; hypothetical protein 3143136 4897951 Rsph17029_2982 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044856.1 3142807 D 349101 CDS YP_001044857.1 126463743 4895985 3143510..3143701 1 NC_009049.1 hypothetical protein 3143701 4895985 Rsph17029_2984 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044857.1 3143510 D 349101 CDS YP_001044858.1 126463744 4895823 complement(3143685..3144404) 1 NC_009049.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 3144404 flgH 4895823 flgH Rhodobacter sphaeroides ATCC 17029 flagellar basal body L-ring protein YP_001044858.1 3143685 R 349101 CDS YP_001044859.1 126463745 4897975 complement(3144415..3144834) 1 NC_009049.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 3144834 flgA 4897975 flgA Rhodobacter sphaeroides ATCC 17029 flagellar basal body P-ring biosynthesis protein FlgA YP_001044859.1 3144415 R 349101 CDS YP_001044860.1 126463746 4897073 complement(3144834..3145619) 1 NC_009049.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 3145619 flgG 4897073 flgG Rhodobacter sphaeroides ATCC 17029 flagellar basal body rod protein FlgG YP_001044860.1 3144834 R 349101 CDS YP_001044861.1 126463747 4897730 complement(3145616..3146335) 1 NC_009049.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Rhodobacter sphaeroides has 2 copies of this and other flagella genes; flagellar basal body rod protein FlgF 3146335 flgF 4897730 flgF Rhodobacter sphaeroides ATCC 17029 flagellar basal body rod protein FlgF YP_001044861.1 3145616 R 349101 CDS YP_001044862.1 126463748 4897745 complement(3146337..3146603) 1 NC_009049.1 PFAM: export protein FliQ, family 3; KEGG: rsp:RSP_1328 flagellar biosynthetic protein FliQ; export protein FliQ 3146603 4897745 Rsph17029_2989 Rhodobacter sphaeroides ATCC 17029 export protein FliQ YP_001044862.1 3146337 R 349101 CDS YP_001044863.1 126463749 4897737 complement(3146603..3146893) 1 NC_009049.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar hook-basal body protein FliE 3146893 fliE 4897737 fliE Rhodobacter sphaeroides ATCC 17029 flagellar hook-basal body protein FliE YP_001044863.1 3146603 R 349101 CDS YP_001044864.1 126463750 4895953 complement(3146907..3147287) 1 NC_009049.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 3147287 flgC 4895953 flgC Rhodobacter sphaeroides ATCC 17029 flagellar basal body rod protein FlgC YP_001044864.1 3146907 R 349101 CDS YP_001044865.1 126463751 4895930 complement(3147290..3147673) 1 NC_009049.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 3147673 flgB 4895930 flgB Rhodobacter sphaeroides ATCC 17029 flagellar basal body rod protein FlgB YP_001044865.1 3147290 R 349101 CDS YP_001044866.1 126463753 4898432 444..941 1 NC_009050.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: rsp:RSP_3342 bacterioferritin; bacterioferritin 941 4898432 Rsph17029_2993 Rhodobacter sphaeroides ATCC 17029 bacterioferritin YP_001044866.1 444 D 349101 CDS YP_001044867.1 126463754 4899017 1624..2730 1 NC_009050.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_3343 putative glycosyl transferase; group 1 glycosyl transferase 2730 4899017 Rsph17029_2994 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001044867.1 1624 D 349101 CDS YP_001044868.1 126463755 4899018 complement(2737..4209) 1 NC_009050.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rsp:RSP_3344 PAS sensor diguanylate cyclase; diguanylate cyclase 4209 4899018 Rsph17029_2995 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase YP_001044868.1 2737 R 349101 CDS YP_001044869.1 126463756 4898353 4526..5770 1 NC_009050.1 PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_3345 hypothetical protein; hypothetical protein 5770 4898353 Rsph17029_2996 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044869.1 4526 D 349101 CDS YP_001044870.1 126463757 4898354 complement(5780..8506) 1 NC_009050.1 KEGG: rsp:RSP_3346 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase, DHPS; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein; methionine synthase 8506 4898354 Rsph17029_2997 Rhodobacter sphaeroides ATCC 17029 methionine synthase YP_001044870.1 5780 R 349101 CDS YP_001044871.1 126463758 4898355 complement(8503..9582) 1 NC_009050.1 PFAM: homocysteine S-methyltransferase; KEGG: rsp:RSP_3347 methionine synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase 9582 4898355 Rsph17029_2998 Rhodobacter sphaeroides ATCC 17029 methionine synthase YP_001044871.1 8503 R 349101 CDS YP_001044872.1 126463759 4899149 9857..10735 1 NC_009050.1 KEGG: rsp:RSP_3349 hypothetical protein; hypothetical protein 10735 4899149 Rsph17029_2999 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044872.1 9857 D 349101 CDS YP_001044873.1 126463760 4899150 10732..11775 1 NC_009050.1 KEGG: rsp:RSP_3350 lipocalin-related protein; lipocalin-related protein 11775 4899150 Rsph17029_3000 Rhodobacter sphaeroides ATCC 17029 lipocalin-related protein YP_001044873.1 10732 D 349101 CDS YP_001044874.1 126463761 4899151 12127..12360 1 NC_009050.1 KEGG: rsp:RSP_3351 hypothetical protein; hypothetical protein 12360 4899151 Rsph17029_3001 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044874.1 12127 D 349101 CDS YP_001044875.1 126463762 4898890 12750..13724 1 NC_009050.1 PFAM: phage late control D family protein; KEGG: rsp:RSP_3359 phage tail protein D; phage late control D family protein 13724 4898890 Rsph17029_3003 Rhodobacter sphaeroides ATCC 17029 phage late control D family protein YP_001044875.1 12750 D 349101 CDS YP_001044876.1 126463763 4899153 13784..14749 1 NC_009050.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rsp:RSP_3360 adenine specific DNA methyltransferase, D12 class; D12 class N6 adenine-specific DNA methyltransferase 14749 4899153 Rsph17029_3004 Rhodobacter sphaeroides ATCC 17029 D12 class N6 adenine-specific DNA methyltransferase YP_001044876.1 13784 D 349101 CDS YP_001044877.1 126463764 4898496 15035..16090 1 NC_009050.1 PFAM: protein of unknown function DUF450; KEGG: rsp:RSP_3361 putative restriction endonuclease or methylase; hypothetical protein 16090 4898496 Rsph17029_3005 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044877.1 15035 D 349101 CDS YP_001044878.1 126463765 4898497 16135..16467 1 NC_009050.1 hypothetical protein 16467 4898497 Rsph17029_3006 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044878.1 16135 D 349101 CDS YP_001044879.1 126463766 4898498 16464..17030 1 NC_009050.1 hypothetical protein 17030 4898498 Rsph17029_3007 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044879.1 16464 D 349101 CDS YP_001044880.1 126463767 4898499 17433..17936 1 NC_009050.1 KEGG: rsp:RSP_3363 hypothetical protein; hypothetical protein 17936 4898499 Rsph17029_3008 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044880.1 17433 D 349101 CDS YP_001044881.1 126463768 4898500 17964..18785 1 NC_009050.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 18785 4898500 Rsph17029_3009 Rhodobacter sphaeroides ATCC 17029 pyrroline-5-carboxylate reductase YP_001044881.1 17964 D 349101 CDS YP_001044882.1 126463769 4898209 18782..19114 1 NC_009050.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: rsp:RSP_3365 protein secretion chaperonine; export-related chaperone CsaA 19114 4898209 Rsph17029_3010 Rhodobacter sphaeroides ATCC 17029 export-related chaperone CsaA YP_001044882.1 18782 D 349101 CDS YP_001044883.1 126463770 4898210 19111..20058 1 NC_009050.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3366 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 20058 4898210 Rsph17029_3011 Rhodobacter sphaeroides ATCC 17029 D-isomer specific 2-hydroxyacid dehydrogenase YP_001044883.1 19111 D 349101 CDS YP_001044884.1 126463771 4898330 20267..20932 1 NC_009050.1 KEGG: rsp:RSP_3367 hypothetical protein; hypothetical protein 20932 4898330 Rsph17029_3012 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044884.1 20267 D 349101 CDS YP_001044885.1 126463772 4898891 complement(21233..22552) 1 NC_009050.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rsp:RSP_3368 periplasmic sensor diguanylate cyclase; diguanylate cyclase 22552 4898891 Rsph17029_3013 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase YP_001044885.1 21233 R 349101 CDS YP_001044886.1 126463773 4898332 complement(22684..22839) 1 NC_009050.1 KEGG: rsp:RSP_6179 hypothetical protein; hypothetical protein 22839 4898332 Rsph17029_3014 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044886.1 22684 R 349101 CDS YP_001044887.1 126463774 4898790 complement(22836..24194) 1 NC_009050.1 PFAM: Amidase; KEGG: rsp:RSP_3369 Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A; amidase 24194 4898790 Rsph17029_3015 Rhodobacter sphaeroides ATCC 17029 amidase YP_001044887.1 22836 R 349101 CDS YP_001044888.1 126463775 4898791 complement(24181..25602) 1 NC_009050.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_3370 TRAP-T family transporter, DctM (12 TMs) subunit; TRAP C4-dicarboxylate transport system permease DctM subunit 25602 4898791 Rsph17029_3016 Rhodobacter sphaeroides ATCC 17029 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001044888.1 24181 R 349101 CDS YP_001044889.1 126463776 4898792 complement(25784..26356) 1 NC_009050.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_3371 TRAP-T family transporter, small (4 TMs) inner membrane subunit; tripartite ATP-independent periplasmic transporter DctQ 26356 4898792 Rsph17029_3017 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001044889.1 25784 R 349101 CDS YP_001044890.1 126463777 4898651 complement(26408..27547) 1 NC_009050.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_3372 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter- DctP subunit 27547 4898651 Rsph17029_3018 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001044890.1 26408 R 349101 CDS YP_001044891.1 126463778 4898652 complement(27725..28930) 1 NC_009050.1 PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_3373 ABC efflux transporter, inner membrane subunit; hypothetical protein 28930 4898652 Rsph17029_3019 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044891.1 27725 R 349101 CDS YP_001044892.1 126463779 4898653 complement(28932..29633) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3374 ABC efflux transporter, ATPase subunit; ABC transporter 29633 4898653 Rsph17029_3020 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044892.1 28932 R 349101 CDS YP_001044893.1 126463780 4898553 complement(29630..30886) 1 NC_009050.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_3375 membrane fusion protein, HlyD family; RND family efflux transporter MFP subunit 30886 4898553 Rsph17029_3021 Rhodobacter sphaeroides ATCC 17029 RND family efflux transporter MFP subunit YP_001044893.1 29630 R 349101 CDS YP_001044894.1 126463781 4898554 complement(30974..31417) 1 NC_009050.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 31417 4898554 Rsph17029_3022 Rhodobacter sphaeroides ATCC 17029 3-dehydroquinate dehydratase YP_001044894.1 30974 R 349101 CDS YP_001044895.1 126463782 4898555 31597..32481 1 NC_009050.1 KEGG: rsp:RSP_3377 glutathione S-transferase family protein; glutathione S-transferase family protein 32481 4898555 Rsph17029_3023 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase family protein YP_001044895.1 31597 D 349101 CDS YP_001044896.1 126463783 4898445 32545..33156 1 NC_009050.1 KEGG: rsp:RSP_3378 hypothetical protein; hypothetical protein 33156 4898445 Rsph17029_3024 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044896.1 32545 D 349101 CDS YP_001044897.1 126463784 4898446 33156..33806 1 NC_009050.1 KEGG: rsp:RSP_3379 hypothetical protein; hypothetical protein 33806 4898446 Rsph17029_3025 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044897.1 33156 D 349101 CDS YP_001044898.1 126463785 4898447 34042..34707 1 NC_009050.1 PFAM: protein of unknown function DUF1236; SH3, type 3 domain protein; KEGG: rsp:RSP_3380 hypothetical protein; hypothetical protein 34707 4898447 Rsph17029_3026 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044898.1 34042 D 349101 CDS YP_001044899.1 126463786 4898968 complement(34788..35762) 1 NC_009050.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_3381 NAD(P)H -dependent quinone oxidoreductase; alcohol dehydrogenase 35762 4898968 Rsph17029_3027 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001044899.1 34788 R 349101 CDS YP_001044900.1 126463787 4898181 complement(35759..36115) 1 NC_009050.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_3382 hypothetical protein; alkylhydroperoxidase 36115 4898181 Rsph17029_3028 Rhodobacter sphaeroides ATCC 17029 alkylhydroperoxidase YP_001044900.1 35759 R 349101 CDS YP_001044901.1 126463788 4898182 complement(36202..37020) 1 NC_009050.1 PFAM: cyclase family protein; KEGG: rsp:RSP_3383 hypothetical protein; cyclase family protein 37020 4898182 Rsph17029_3029 Rhodobacter sphaeroides ATCC 17029 cyclase family protein YP_001044901.1 36202 R 349101 CDS YP_001044902.1 126463789 4898183 complement(37191..38354) 1 NC_009050.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rsp:RSP_3384 mandelate racemase/muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein 38354 4898183 Rsph17029_3030 Rhodobacter sphaeroides ATCC 17029 mandelate racemase/muconate lactonizing protein YP_001044902.1 37191 R 349101 CDS YP_001044903.1 126463790 4898612 complement(38432..39379) 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3385 transcriptional regulator, LysR family; LysR family transcriptional regulator 39379 4898612 Rsph17029_3031 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044903.1 38432 R 349101 CDS YP_001044904.1 126463791 4898613 39640..40596 1 NC_009050.1 PFAM: Uncharacterized protein UPF0065; KEGG: rsp:RSP_3386 TRAP-T family transporter, periplasmic binding protein; hypothetical protein 40596 4898613 Rsph17029_3032 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044904.1 39640 D 349101 CDS YP_001044905.1 126463792 4898614 40606..42582 1 NC_009050.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: rsp:RSP_3387 TRAP-T family transporter, fused small and large inner membrane subunits; hypothetical protein 42582 4898614 Rsph17029_3033 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044905.1 40606 D 349101 CDS YP_001044906.1 126463793 4898112 42597..43679 1 NC_009050.1 KEGG: rsp:RSP_3388 putative isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase TtuC; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 43679 4898112 Rsph17029_3034 Rhodobacter sphaeroides ATCC 17029 tartrate dehydrogenase YP_001044906.1 42597 D 349101 CDS YP_001044907.1 126463794 4898113 43690..44763 1 NC_009050.1 KEGG: rsp:RSP_3389 isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 44763 4898113 Rsph17029_3035 Rhodobacter sphaeroides ATCC 17029 tartrate dehydrogenase YP_001044907.1 43690 D 349101 CDS YP_001044908.1 126463795 4898114 complement(44936..45718) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3390 ABC Fe3+-siderophores transporter, ATPase subunit; ABC transporter 45718 4898114 Rsph17029_3036 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044908.1 44936 R 349101 CDS YP_001044909.1 126463796 4899135 complement(45715..46749) 1 NC_009050.1 PFAM: transport system permease protein; KEGG: rsp:RSP_3391 ABC Fe3+-siderophores transporter, inner membrane subunit; transport system permease protein 46749 4899135 Rsph17029_3037 Rhodobacter sphaeroides ATCC 17029 transport system permease protein YP_001044909.1 45715 R 349101 CDS YP_001044910.1 126463797 4899136 complement(46746..47750) 1 NC_009050.1 PFAM: periplasmic binding protein; KEGG: rsp:RSP_3392 ABC Fe3+-siderophores transporter, periplasmic binding protein; periplasmic binding protein 47750 4899136 Rsph17029_3038 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein YP_001044910.1 46746 R 349101 CDS YP_001044911.1 126463798 4899137 complement(48221..49015) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3393 ABC opine/polyamine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 49015 4899137 Rsph17029_3039 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001044911.1 48221 R 349101 CDS YP_001044912.1 126463799 4898594 complement(49026..49898) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3395 ABC opine/polyamine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 49898 4898594 Rsph17029_3040 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001044912.1 49026 R 349101 CDS YP_001044913.1 126463800 4898595 complement(49895..51013) 1 NC_009050.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3396 ABC opine/polyamine transporter, ATPase subunit; ABC transporter 51013 4898595 Rsph17029_3041 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044913.1 49895 R 349101 CDS YP_001044914.1 126463801 4898596 complement(51015..52058) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3397 ABC opine/polyamine transporter, periplasmic binding protein; extracellular solute-binding protein 52058 4898596 Rsph17029_3042 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001044914.1 51015 R 349101 CDS YP_001044915.1 126463802 4899022 complement(52132..52785) 1 NC_009050.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3398 hypothetical protein; dimethylmenaquinone methyltransferase 52785 4899022 Rsph17029_3043 Rhodobacter sphaeroides ATCC 17029 dimethylmenaquinone methyltransferase YP_001044915.1 52132 R 349101 CDS YP_001044916.1 126463803 4899023 complement(52795..53598) 1 NC_009050.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3399 carbon-nitrogen hydrolase family protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 53598 4899023 Rsph17029_3044 Rhodobacter sphaeroides ATCC 17029 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001044916.1 52795 R 349101 CDS YP_001044917.1 126463804 4899159 complement(53688..54578) 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3400 transcriptional regulator, LysR family; LysR family transcriptional regulator 54578 4899159 Rsph17029_3045 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044917.1 53688 R 349101 CDS YP_001044918.1 126463805 4899160 54802..56490 1 NC_009050.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rsp:RSP_6180 hypothetical protein; diguanylate cyclase 56490 4899160 Rsph17029_3046 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase YP_001044918.1 54802 D 349101 CDS YP_001044919.1 126463806 4899161 56506..59142 1 NC_009050.1 KEGG: rsp:RSP_3402 multisensor diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 59142 4899161 Rsph17029_3047 Rhodobacter sphaeroides ATCC 17029 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001044919.1 56506 D 349101 CDS YP_001044920.1 126463807 4898671 complement(59149..59991) 1 NC_009050.1 PFAM: protein of unknown function DUF218; KEGG: rsp:RSP_3403 hypothetical protein; hypothetical protein 59991 4898671 Rsph17029_3048 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044920.1 59149 R 349101 CDS YP_001044921.1 126463808 4898672 60243..61340 1 NC_009050.1 KEGG: rsp:RSP_3404 hypothetical protein; hypothetical protein 61340 4898672 Rsph17029_3049 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044921.1 60243 D 349101 CDS YP_001044922.1 126463809 4898673 61373..62092 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3405 transcriptional regulator, GntR family; GntR family transcriptional regulator 62092 4898673 Rsph17029_3050 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001044922.1 61373 D 349101 CDS YP_001044923.1 126463810 4898457 complement(62137..63123) 1 NC_009050.1 KEGG: rsp:RSP_3406 4-hydroxythreonine-4-phosphate dehydrogenase 2; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 63123 4898457 Rsph17029_3051 Rhodobacter sphaeroides ATCC 17029 4-hydroxythreonine-4-phosphate dehydrogenase YP_001044923.1 62137 R 349101 CDS YP_001044924.1 126463811 4898458 complement(63149..64099) 1 NC_009050.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3407 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding subunit; D-isomer specific 2-hydroxyacid dehydrogenase 64099 4898458 Rsph17029_3052 Rhodobacter sphaeroides ATCC 17029 D-isomer specific 2-hydroxyacid dehydrogenase YP_001044924.1 63149 R 349101 CDS YP_001044925.1 126463812 4898459 complement(64096..64980) 1 NC_009050.1 PFAM: dihydrodipicolinate synthetase; KEGG: rsp:RSP_3408 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 64980 4898459 Rsph17029_3053 Rhodobacter sphaeroides ATCC 17029 dihydrodipicolinate synthetase YP_001044925.1 64096 R 349101 CDS YP_001044926.1 126463813 4898526 complement(64984..66480) 1 NC_009050.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: rsp:RSP_3409 TRAP-T family transporter, large (12 TMs) inner membrane subunit; hypothetical protein 66480 4898526 Rsph17029_3054 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044926.1 64984 R 349101 CDS YP_001044927.1 126463814 4898527 complement(66541..67494) 1 NC_009050.1 PFAM: Uncharacterized protein UPF0065; KEGG: rsp:RSP_3410 TRAP-T family transporter, periplasmic binding protein; hypothetical protein 67494 4898527 Rsph17029_3055 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044927.1 66541 R 349101 CDS YP_001044928.1 126463815 4898528 complement(67530..67994) 1 NC_009050.1 KEGG: rsp:RSP_3411 TRAP-T family transporter, small (4 TMs) inner membrane subunit; TRAP-T family transporter small inner membrane subunit 67994 4898528 Rsph17029_3056 Rhodobacter sphaeroides ATCC 17029 TRAP-T family transporter small inner membrane subunit YP_001044928.1 67530 R 349101 CDS YP_001044929.1 126463816 4899069 68255..69376 1 NC_009050.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rsp:RSP_3412 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 69376 4899069 Rsph17029_3057 Rhodobacter sphaeroides ATCC 17029 iron-containing alcohol dehydrogenase YP_001044929.1 68255 D 349101 CDS YP_001044930.1 126463817 4899070 complement(69424..70224) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit; ABC transporter 70224 4899070 Rsph17029_3058 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044930.1 69424 R 349101 CDS YP_001044931.1 126463818 4899071 complement(70221..71261) 1 NC_009050.1 PFAM: transport system permease protein; KEGG: rsp:RSP_3414 ABC Fe+3-siderophore transporter, inner membrane subunit; transport system permease protein 71261 4899071 Rsph17029_3059 Rhodobacter sphaeroides ATCC 17029 transport system permease protein YP_001044931.1 70221 R 349101 CDS YP_001044932.1 126463819 4898965 complement(71258..72436) 1 NC_009050.1 PFAM: transport system permease protein; KEGG: rsp:RSP_3415 ABC Fe+3-siderophore transporter, inner membrane subunit; transport system permease 72436 4898965 Rsph17029_3060 Rhodobacter sphaeroides ATCC 17029 transport system permease YP_001044932.1 71258 R 349101 CDS YP_001044933.1 126463820 4898966 complement(72433..73410) 1 NC_009050.1 PFAM: periplasmic binding protein; KEGG: rsp:RSP_3416 ABC Fe+3-siderophore transporter, periplasmic binding protein; periplasmic binding protein 73410 4898966 Rsph17029_3061 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein YP_001044933.1 72433 R 349101 CDS YP_001044934.1 126463821 4898967 73737..75884 1 NC_009050.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_3417 TonB dependent outer membrane ferrichrome-iron receptor; TonB-dependent siderophore receptor 75884 4898967 Rsph17029_3062 Rhodobacter sphaeroides ATCC 17029 TonB-dependent siderophore receptor YP_001044934.1 73737 D 349101 CDS YP_001044935.1 126463822 4898991 complement(75998..76918) 1 NC_009050.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: pde:Pden_3520 helix-turn-helix-domain containing protein, AraC type; helix-turn-helix domain-containing protein 76918 4898991 Rsph17029_3063 Rhodobacter sphaeroides ATCC 17029 helix-turn-helix domain-containing protein YP_001044935.1 75998 R 349101 CDS YP_001044936.1 126463823 4898992 77717..78295 1 NC_009050.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_3419 hypothetical protein; peroxidase-like protein 78295 4898992 Rsph17029_3064 Rhodobacter sphaeroides ATCC 17029 peroxidase-like protein YP_001044936.1 77717 D 349101 CDS YP_001044937.1 126463824 4898993 78516..80090 1 NC_009050.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3420 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 80090 4898993 Rsph17029_3065 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001044937.1 78516 D 349101 CDS YP_001044938.1 126463825 4899089 80087..80662 1 NC_009050.1 KEGG: rsp:RSP_3421 hypothetical protein; hypothetical protein 80662 4899089 Rsph17029_3066 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044938.1 80087 D 349101 CDS YP_001044939.1 126463826 4899090 80674..81252 1 NC_009050.1 KEGG: rsp:RSP_3422 hypothetical protein; hypothetical protein 81252 4899090 Rsph17029_3067 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044939.1 80674 D 349101 CDS YP_001044940.1 126463827 4899091 complement(81431..82198) 1 NC_009050.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_3423 probable exodeoxyribonuclease III; exodeoxyribonuclease III Xth 82198 4899091 Rsph17029_3068 Rhodobacter sphaeroides ATCC 17029 exodeoxyribonuclease III Xth YP_001044940.1 81431 R 349101 CDS YP_001044941.1 126463828 4898475 82380..83033 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3424 hypothetical protein; short-chain dehydrogenase/reductase SDR 83033 4898475 Rsph17029_3069 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001044941.1 82380 D 349101 CDS YP_001044942.1 126463829 4898476 complement(83146..83724) 1 NC_009050.1 KEGG: rsp:RSP_3425 hypothetical protein; hypothetical protein 83724 4898476 Rsph17029_3070 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044942.1 83146 R 349101 CDS YP_001044943.1 126463830 4898477 complement(83721..84923) 1 NC_009050.1 PFAM: glutathionylspermidine synthase; KEGG: rsp:RSP_3426 hypothetical protein; glutathionylspermidine synthase 84923 4898477 Rsph17029_3071 Rhodobacter sphaeroides ATCC 17029 glutathionylspermidine synthase YP_001044943.1 83721 R 349101 CDS YP_001044944.1 126463831 4898949 85376..87100 1 NC_009050.1 PFAM: Animal haem peroxidase; KEGG: rsp:RSP_3427 hypothetical protein; heme peroxidase 87100 4898949 Rsph17029_3072 Rhodobacter sphaeroides ATCC 17029 heme peroxidase YP_001044944.1 85376 D 349101 CDS YP_001044945.1 126463832 4898950 87151..89109 1 NC_009050.1 KEGG: rsp:RSP_3428 hypothetical protein; hypothetical protein 89109 4898950 Rsph17029_3073 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044945.1 87151 D 349101 CDS YP_001044946.1 126463833 4898589 89081..90919 1 NC_009050.1 PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rsp:RSP_3429 hypothetical protein; peptidase C14, caspase catalytic subunit p20 90919 4898589 Rsph17029_3074 Rhodobacter sphaeroides ATCC 17029 peptidase C14, caspase catalytic subunit p20 YP_001044946.1 89081 D 349101 CDS YP_001044947.1 126463834 4898590 91007..91669 1 NC_009050.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3430 transcriptional regulator, winged helix family; two component transcriptional regulator 91669 4898590 Rsph17029_3075 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001044947.1 91007 D 349101 CDS YP_001044948.1 126463835 4898591 91666..93018 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3431 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 93018 4898591 Rsph17029_3076 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001044948.1 91666 D 349101 CDS YP_001044949.1 126463836 4898759 93196..94755 1 NC_009050.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3432 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 94755 4898759 Rsph17029_3077 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001044949.1 93196 D 349101 CDS YP_001044950.1 126463837 4898760 94820..95293 1 NC_009050.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: rsp:RSP_3433 transcriptionalregulator, CopG family; CopG family transcriptional regulator 95293 4898760 Rsph17029_3078 Rhodobacter sphaeroides ATCC 17029 CopG family transcriptional regulator YP_001044950.1 94820 D 349101 CDS YP_001044951.1 126463838 4898761 complement(95584..95952) 1 NC_009050.1 KEGG: rsp:RSP_3434 hypothetical protein; hypothetical protein 95952 4898761 Rsph17029_3079 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044951.1 95584 R 349101 CDS YP_001044952.1 126463839 4898175 96053..96385 1 NC_009050.1 KEGG: rsp:RSP_3435 possible DNA-binding protein; putative DNA-binding protein 96385 4898175 Rsph17029_3080 Rhodobacter sphaeroides ATCC 17029 putative DNA-binding protein YP_001044952.1 96053 D 349101 CDS YP_001044953.1 126463840 4898176 complement(96472..97353) 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3436 transcriptional regulator, LysR-family; LysR family transcriptional regulator 97353 4898176 Rsph17029_3081 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044953.1 96472 R 349101 CDS YP_001044954.1 126463841 4898177 97473..98693 1 NC_009050.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 98693 4898177 Rsph17029_3082 Rhodobacter sphaeroides ATCC 17029 aspartate aminotransferase YP_001044954.1 97473 D 349101 CDS YP_001044955.1 126463842 4898166 98690..99115 1 NC_009050.1 PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_3438 translation initiation inhibitor; endoribonuclease L-PSP 99115 4898166 Rsph17029_3083 Rhodobacter sphaeroides ATCC 17029 endoribonuclease L-PSP YP_001044955.1 98690 D 349101 CDS YP_001044956.1 126463843 4898167 99164..100372 1 NC_009050.1 PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_3439 aspartate aminotransferase; class I and II aminotransferase 100372 4898167 Rsph17029_3084 Rhodobacter sphaeroides ATCC 17029 class I and II aminotransferase YP_001044956.1 99164 D 349101 CDS YP_001044957.1 126463844 4898168 100438..101223 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3440 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 101223 4898168 Rsph17029_3085 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001044957.1 100438 D 349101 CDS YP_001044958.1 126463845 4898744 101239..101961 1 NC_009050.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3441 hypothetical protein; hypothetical protein 101961 4898744 Rsph17029_3086 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044958.1 101239 D 349101 CDS YP_001044959.1 126463846 4898745 102056..102997 1 NC_009050.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3442 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 102997 4898745 Rsph17029_3087 Rhodobacter sphaeroides ATCC 17029 D-isomer specific 2-hydroxyacid dehydrogenase YP_001044959.1 102056 D 349101 CDS YP_001044960.1 126463847 4898746 complement(103225..104190) 1 NC_009050.1 PFAM: Acetamidase/Formamidase; KEGG: rsp:RSP_3443 putative acetamidase/formamidase; acetamidase/formamidase 104190 4898746 Rsph17029_3088 Rhodobacter sphaeroides ATCC 17029 acetamidase/formamidase YP_001044960.1 103225 R 349101 CDS YP_001044961.1 126463848 4898190 complement(104202..105386) 1 NC_009050.1 PFAM: creatinase; peptidase M24; KEGG: rsp:RSP_3444 putative Xaa-Pro aminopeptidase; creatinase 105386 4898190 Rsph17029_3089 Rhodobacter sphaeroides ATCC 17029 creatinase YP_001044961.1 104202 R 349101 CDS YP_001044962.1 126463849 4898191 complement(105391..106026) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3445 transcriptional regulator, GntR family; GntR family transcriptional regulator 106026 4898191 Rsph17029_3090 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001044962.1 105391 R 349101 CDS YP_001044963.1 126463850 4898192 complement(106023..107303) 1 NC_009050.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 107303 4898192 Rsph17029_3091 Rhodobacter sphaeroides ATCC 17029 allantoate amidohydrolase YP_001044963.1 106023 R 349101 CDS YP_001044964.1 126463851 4898390 complement(107300..108295) 1 NC_009050.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3447 putative dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 108295 4898390 Rsph17029_3092 Rhodobacter sphaeroides ATCC 17029 D-isomer specific 2-hydroxyacid dehydrogenase YP_001044964.1 107300 R 349101 CDS YP_001044965.1 126463852 4898391 complement(108292..108954) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3448 transcriptional regulator, GntR-family; GntR family transcriptional regulator 108954 4898391 Rsph17029_3093 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001044965.1 108292 R 349101 CDS YP_001044966.1 126463853 4899083 complement(108951..110015) 1 NC_009050.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: rsp:RSP_3449 putative allophanate hydrolase subunit 2; urea amidolyase-like protein 110015 4899083 Rsph17029_3094 Rhodobacter sphaeroides ATCC 17029 urea amidolyase-like protein YP_001044966.1 108951 R 349101 CDS YP_001044967.1 126463854 4899084 complement(110012..110746) 1 NC_009050.1 PFAM: Allophanate hydrolase subunit 1; KEGG: rsp:RSP_3450 hypothetical protein; allophanate hydrolase subunit 1 110746 4899084 Rsph17029_3095 Rhodobacter sphaeroides ATCC 17029 allophanate hydrolase subunit 1 YP_001044967.1 110012 R 349101 CDS YP_001044968.1 126463855 4899085 complement(110806..112107) 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_3451 TRAP-T family transporter, large (12TMs) inner membrane subunit; TRAP dicarboxylate transporter subunit DctM 112107 4899085 Rsph17029_3096 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001044968.1 110806 R 349101 CDS YP_001044969.1 126463856 4898674 complement(112117..112737) 1 NC_009050.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_3452 TRAP-T family transporter, small (4TMs) inner membrane subunit; tripartite ATP-independent periplasmic transporter DctQ 112737 4898674 Rsph17029_3097 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001044969.1 112117 R 349101 CDS YP_001044970.1 126463857 4898675 complement(112748..113731) 1 NC_009050.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_3453 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter- DctP subunit 113731 4898675 Rsph17029_3098 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001044970.1 112748 R 349101 CDS YP_001044971.1 126463858 4898676 113906..114676 1 NC_009050.1 PFAM: LamB/YcsF family protein; KEGG: rsp:RSP_3454 hypothetical protein; LamB/YcsF family protein 114676 4898676 Rsph17029_3099 Rhodobacter sphaeroides ATCC 17029 LamB/YcsF family protein YP_001044971.1 113906 D 349101 CDS YP_001044972.1 126463859 4899096 114688..115545 1 NC_009050.1 PFAM: aminotransferase, class IV; KEGG: rsp:RSP_3455 D-alanine aminotransferase; aminotransferase, class IV 115545 4899096 Rsph17029_3100 Rhodobacter sphaeroides ATCC 17029 aminotransferase, class IV YP_001044972.1 114688 D 349101 CDS YP_001044973.1 126463860 4899097 115557..116483 1 NC_009050.1 PFAM: dihydrodipicolinate synthetase; KEGG: rsp:RSP_3456 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase 116483 4899097 Rsph17029_3101 Rhodobacter sphaeroides ATCC 17029 dihydrodipicolinate synthetase YP_001044973.1 115557 D 349101 CDS YP_001044974.1 126463861 4899098 116990..117853 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_3457 ABC polar amino acid transporter, periplasmic binding protein; extracellular solute-binding protein 117853 4899098 Rsph17029_3102 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001044974.1 116990 D 349101 CDS YP_001044975.1 126463862 4898196 117923..118663 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3458 ABC polar amino acid transporter, ATPase subunit; ABC transporter 118663 4898196 Rsph17029_3103 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001044975.1 117923 D 349101 CDS YP_001044976.1 126463863 4898197 118668..119348 1 NC_009050.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3459 ABC polar amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 119348 4898197 Rsph17029_3104 Rhodobacter sphaeroides ATCC 17029 polar amino acid ABC transporter inner membrane subunit YP_001044976.1 118668 D 349101 CDS YP_001044977.1 126463864 4898198 119352..120017 1 NC_009050.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3460 ABC polar amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 120017 4898198 Rsph17029_3105 Rhodobacter sphaeroides ATCC 17029 polar amino acid ABC transporter inner membrane subunit YP_001044977.1 119352 D 349101 CDS YP_001044978.1 126463865 4898140 120056..120982 1 NC_009050.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3461 N-carbamyl-D-amino acid amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 120982 4898140 Rsph17029_3106 Rhodobacter sphaeroides ATCC 17029 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001044978.1 120056 D 349101 CDS YP_001044979.1 126463866 4898141 120995..122452 1 NC_009050.1 catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides; dihydropyrimidinase 122452 4898141 Rsph17029_3107 Rhodobacter sphaeroides ATCC 17029 dihydropyrimidinase YP_001044979.1 120995 D 349101 CDS YP_001044980.1 126463867 4898142 122449..123090 1 NC_009050.1 PFAM: Asp/Glu racemase; KEGG: rsp:RSP_3463 putative hydantoin racemase; Asp/Glu racemase 123090 4898142 Rsph17029_3108 Rhodobacter sphaeroides ATCC 17029 Asp/Glu racemase YP_001044980.1 122449 D 349101 CDS YP_001044981.1 126463868 4898532 123087..124016 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3464 transcriptional regulator, LysR-family; LysR family transcriptional regulator 124016 4898532 Rsph17029_3109 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001044981.1 123087 D 349101 CDS YP_001044982.1 126463869 4898533 124013..124621 1 NC_009050.1 KEGG: rsp:RSP_3465 hypothetical protein; hypothetical protein 124621 4898533 Rsph17029_3110 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044982.1 124013 D 349101 CDS YP_001044983.1 126463870 4898534 124979..126268 1 NC_009050.1 KEGG: rsp:RSP_3466 hypothetical protein; hypothetical protein 126268 4898534 Rsph17029_3111 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044983.1 124979 D 349101 CDS YP_001044984.1 126463871 4898368 126270..127292 1 NC_009050.1 KEGG: rsp:RSP_3467 hypothetical protein; hypothetical protein 127292 4898368 Rsph17029_3112 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044984.1 126270 D 349101 CDS YP_001044985.1 126463872 4898369 127285..128376 1 NC_009050.1 catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase 128376 4898369 Rsph17029_3113 Rhodobacter sphaeroides ATCC 17029 3-oxoacyl-(acyl carrier protein) synthase YP_001044985.1 127285 D 349101 CDS YP_001044986.1 126463873 4898384 128373..129374 1 NC_009050.1 KEGG: rsp:RSP_3469 hypothetical protein; hypothetical protein 129374 4898384 Rsph17029_3114 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044986.1 128373 D 349101 CDS YP_001044987.1 126463874 4898385 129371..130150 1 NC_009050.1 KEGG: rsp:RSP_3470 hypothetical protein; hypothetical protein 130150 4898385 Rsph17029_3115 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044987.1 129371 D 349101 CDS YP_001044988.1 126463875 4898386 130173..130859 1 NC_009050.1 KEGG: rsp:RSP_3471 hypothetical protein; hypothetical protein 130859 4898386 Rsph17029_3116 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044988.1 130173 D 349101 CDS YP_001044989.1 126463876 4898918 complement(130856..131254) 1 NC_009050.1 KEGG: rsp:RSP_3472 hypothetical protein; hypothetical protein 131254 4898918 Rsph17029_3117 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044989.1 130856 R 349101 CDS YP_001044990.1 126463877 4898919 complement(131247..133916) 1 NC_009050.1 PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3474 hypothetical protein; ATPase 133916 4898919 Rsph17029_3118 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001044990.1 131247 R 349101 CDS YP_001044991.1 126463878 4898920 134030..136036 1 NC_009050.1 PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rsp:RSP_3475 serine/threonine protein kinase; protein kinase 136036 4898920 Rsph17029_3119 Rhodobacter sphaeroides ATCC 17029 protein kinase YP_001044991.1 134030 D 349101 CDS YP_001044992.1 126463879 4898359 136135..137208 1 NC_009050.1 PFAM: ImpA domain protein; KEGG: rsp:RSP_3476 hypothetical protein; ImpA domain-containing protein 137208 4898359 Rsph17029_3120 Rhodobacter sphaeroides ATCC 17029 ImpA domain-containing protein YP_001044992.1 136135 D 349101 CDS YP_001044993.1 126463880 4898360 137227..137757 1 NC_009050.1 PFAM: Uncharacterised conserved protein UCP028301; KEGG: rsp:RSP_3477 hypothetical protein; hypothetical protein 137757 4898360 Rsph17029_3121 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044993.1 137227 D 349101 CDS YP_001044994.1 126463881 4898361 137760..139271 1 NC_009050.1 PFAM: protein of unknown function DUF877; KEGG: rsp:RSP_3478 hypothetical protein; hypothetical protein 139271 4898361 Rsph17029_3122 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044994.1 137760 D 349101 CDS YP_001044995.1 126463882 4898716 139323..139814 1 NC_009050.1 PFAM: protein of unknown function DUF796; KEGG: rsp:RSP_3479 hypothetical protein; hypothetical protein 139814 4898716 Rsph17029_3123 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044995.1 139323 D 349101 CDS YP_001044996.1 126463883 4898717 139847..140554 1 NC_009050.1 PFAM: GPW/gp25 family protein; KEGG: rsp:RSP_3480 hypothetical protein; GPW/gp25 family protein 140554 4898717 Rsph17029_3124 Rhodobacter sphaeroides ATCC 17029 GPW/gp25 family protein YP_001044996.1 139847 D 349101 CDS YP_001044997.1 126463884 4898718 140554..142419 1 NC_009050.1 PFAM: protein of unknown function DUF879; KEGG: rsp:RSP_3481 hypothetical protein; hypothetical protein 142419 4898718 Rsph17029_3125 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044997.1 140554 D 349101 CDS YP_001044998.1 126463885 4898701 142383..143381 1 NC_009050.1 PFAM: protein of unknown function DUF1305; KEGG: rsp:RSP_3482 hypothetical protein; hypothetical protein 143381 4898701 Rsph17029_3126 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001044998.1 142383 D 349101 CDS YP_001044999.1 126463886 4898702 143375..144604 1 NC_009050.1 PFAM: Forkhead-associated protein; KEGG: rsp:RSP_3483 FHA domain-containing protein; FHA domain-containing protein 144604 4898702 Rsph17029_3127 Rhodobacter sphaeroides ATCC 17029 FHA domain-containing protein YP_001044999.1 143375 D 349101 CDS YP_001045000.1 126463887 4898703 144597..145049 1 NC_009050.1 KEGG: rsp:RSP_3484 hypothetical protein; hypothetical protein 145049 4898703 Rsph17029_3128 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045000.1 144597 D 349101 CDS YP_001045001.1 126463888 4899187 145058..146386 1 NC_009050.1 PFAM: protein of unknown function DUF876; KEGG: rsp:RSP_3485 hypothetical protein; hypothetical protein 146386 4899187 Rsph17029_3129 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045001.1 145058 D 349101 CDS YP_001045002.1 126463889 4899188 146451..147812 1 NC_009050.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_3486 possible outer membrane protein, OmpA family; OmpA/MotB domain-containing protein 147812 4899188 Rsph17029_3130 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001045002.1 146451 D 349101 CDS YP_001045003.1 126463890 4899189 147812..151333 1 NC_009050.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: rsp:RSP_3487 hypothetical protein; ImcF domain-containing protein 151333 4899189 Rsph17029_3131 Rhodobacter sphaeroides ATCC 17029 ImcF domain-containing protein YP_001045003.1 147812 D 349101 CDS YP_001045004.1 126463891 4898273 151323..151814 1 NC_009050.1 KEGG: rsp:RSP_3488 hypothetical protein; hypothetical protein 151814 4898273 Rsph17029_3132 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045004.1 151323 D 349101 CDS YP_001045005.1 126463892 4898274 complement(151824..154127) 1 NC_009050.1 PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: rsp:RSP_3489 hypothetical protein; Rhs element Vgr protein 154127 4898274 Rsph17029_3133 Rhodobacter sphaeroides ATCC 17029 Rhs element Vgr protein YP_001045005.1 151824 R 349101 CDS YP_001045006.1 126463893 4898145 complement(154144..156552) 1 NC_009050.1 PFAM: protein of unknown function DUF1215; KEGG: rsp:RSP_3490 hypothetical protein; hypothetical protein 156552 4898145 Rsph17029_3134 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045006.1 154144 R 349101 CDS YP_001045007.1 126463894 4898146 complement(156552..157400) 1 NC_009050.1 KEGG: rsp:RSP_3491 hypothetical protein; hypothetical protein 157400 4898146 Rsph17029_3135 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045007.1 156552 R 349101 CDS YP_001045008.1 126463895 4898147 complement(157404..158159) 1 NC_009050.1 PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: rsp:RSP_3492 protein phosphatase 2C-like; protein phosphatase 2C domain-containing protein 158159 4898147 Rsph17029_3136 Rhodobacter sphaeroides ATCC 17029 protein phosphatase 2C domain-containing protein YP_001045008.1 157404 R 349101 CDS YP_001045009.1 126463896 4898710 158302..159066 1 NC_009050.1 PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_3494 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 159066 4898710 Rsph17029_3137 Rhodobacter sphaeroides ATCC 17029 OmpA/MotB domain-containing protein YP_001045009.1 158302 D 349101 CDS YP_001045010.1 126463897 4898711 complement(159063..159989) 1 NC_009050.1 KEGG: rsp:RSP_3493 hypothetical protein; hypothetical protein 159989 4898711 Rsph17029_3138 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045010.1 159063 R 349101 CDS YP_001045011.1 126463898 4898712 complement(159986..160396) 1 NC_009050.1 KEGG: rsp:RSP_3495 hypothetical protein; hypothetical protein 160396 4898712 Rsph17029_3139 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045011.1 159986 R 349101 CDS YP_001045012.1 126463899 4899055 complement(160396..161469) 1 NC_009050.1 KEGG: rsp:RSP_3496 zinc carboxypeptidase A metalloprotease (M14); zinc carboxypeptidase A metalloprotease (M14) 161469 4899055 Rsph17029_3140 Rhodobacter sphaeroides ATCC 17029 zinc carboxypeptidase A metalloprotease (M14) YP_001045012.1 160396 R 349101 CDS YP_001045013.1 126463900 4899056 161704..162018 1 NC_009050.1 hypothetical protein 162018 4899056 Rsph17029_3141 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045013.1 161704 D 349101 CDS YP_001045014.1 126463901 4899057 162028..164943 1 NC_009050.1 PFAM: Sel1 domain protein repeat-containing protein; peptidase C14, caspase catalytic subunit p20; KEGG: rsp:RSP_3497 caspase-1, P20; peptidase C14, caspase catalytic subunit p20 164943 4899057 Rsph17029_3142 Rhodobacter sphaeroides ATCC 17029 peptidase C14, caspase catalytic subunit p20 YP_001045014.1 162028 D 349101 CDS YP_001045015.1 126463902 4899086 164940..165398 1 NC_009050.1 KEGG: rsp:RSP_6182 hypothetical protein; hypothetical protein 165398 4899086 Rsph17029_3143 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045015.1 164940 D 349101 CDS YP_001045016.1 126463903 4899087 165400..167568 1 NC_009050.1 KEGG: rsp:RSP_3498 antifreeze protein, type I; antifreeze protein, type I 167568 4899087 Rsph17029_3144 Rhodobacter sphaeroides ATCC 17029 antifreeze protein, type I YP_001045016.1 165400 D 349101 CDS YP_001045017.1 126463904 4899088 complement(167590..168831) 1 NC_009050.1 KEGG: rsp:RSP_3499 short chain dehydrogenase; short chain dehydrogenase 168831 4899088 Rsph17029_3145 Rhodobacter sphaeroides ATCC 17029 short chain dehydrogenase YP_001045017.1 167590 R 349101 CDS YP_001045018.1 126463905 4898609 complement(168895..169911) 1 NC_009050.1 KEGG: rsp:RSP_3500 ABC sugar transporter, periplasmic binding protein; ABC sugar transporter, periplasmic binding protein 169911 4898609 Rsph17029_3146 Rhodobacter sphaeroides ATCC 17029 ABC sugar transporter, periplasmic binding protein YP_001045018.1 168895 R 349101 CDS YP_001045019.1 126463906 4898610 complement(169946..170929) 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3501 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 170929 4898610 Rsph17029_3147 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045019.1 169946 R 349101 CDS YP_001045020.1 126463907 4898611 complement(170926..171936) 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3502 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 171936 4898611 Rsph17029_3148 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045020.1 170926 R 349101 CDS YP_001045021.1 126463908 4898103 complement(171929..173404) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3503 ABC sugar transporter, fused ATPase domains; ABC transporter 173404 4898103 Rsph17029_3149 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045021.1 171929 R 349101 CDS YP_001045022.1 126463909 4898104 173620..174558 1 NC_009050.1 PFAM: putative sugar-binding domain protein; KEGG: rsp:RSP_3505 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 174558 4898104 Rsph17029_3150 Rhodobacter sphaeroides ATCC 17029 DeoR family transcriptional regulator YP_001045022.1 173620 D 349101 CDS YP_001045023.1 126463910 4898105 174562..176091 1 NC_009050.1 PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_3506 probable sugar kinase, EGGY family protein; autoinducer-2 (AI-2) kinase 176091 4898105 Rsph17029_3151 Rhodobacter sphaeroides ATCC 17029 autoinducer-2 (AI-2) kinase YP_001045023.1 174562 D 349101 CDS YP_001045024.1 126463911 4898905 176121..176429 1 NC_009050.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rsp:RSP_3507 hypothetical protein; antibiotic biosynthesis monooxygenase 176429 4898905 Rsph17029_3152 Rhodobacter sphaeroides ATCC 17029 antibiotic biosynthesis monooxygenase YP_001045024.1 176121 D 349101 CDS YP_001045025.1 126463912 4898906 176855..178177 1 NC_009050.1 PFAM: Acetamidase/Formamidase; KEGG: rsp:RSP_3508 predicted acetamidase/formamidase; acetamidase/formamidase 178177 4898906 Rsph17029_3153 Rhodobacter sphaeroides ATCC 17029 acetamidase/formamidase YP_001045025.1 176855 D 349101 CDS YP_001045026.1 126463913 4898620 complement(178385..178993) 1 NC_009050.1 PFAM: Hemolysin-type calcium-binding region; KEGG: rsp:RSP_3509 hemolysin-type calcium-binding region, RTX; hemolysin-type calcium-binding region 178993 4898620 Rsph17029_3154 Rhodobacter sphaeroides ATCC 17029 hemolysin-type calcium-binding region YP_001045026.1 178385 R 349101 CDS YP_001045027.1 126463914 4898621 179127..179480 1 NC_009050.1 KEGG: rsp:RSP_3510 hypothetical protein; hypothetical protein 179480 4898621 Rsph17029_3155 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045027.1 179127 D 349101 CDS YP_001045028.1 126463915 4898622 179480..180142 1 NC_009050.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3511 two component transcriptional regulator, winged helix family family; two component transcriptional regulator 180142 4898622 Rsph17029_3156 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001045028.1 179480 D 349101 CDS YP_001045029.1 126463916 4898719 180139..181482 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3512 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 181482 4898719 Rsph17029_3157 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001045029.1 180139 D 349101 CDS YP_001045030.1 126463917 4898720 182060..183037 1 NC_009050.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rsp:RSP_3513 GAF sensor diguanylate cyclase; diguanylate cyclase 183037 4898720 Rsph17029_3158 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase YP_001045030.1 182060 D 349101 CDS YP_001045031.1 126463918 4898721 complement(183130..184134) 1 NC_009050.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: rsp:RSP_3514 transcriptional regulator, AraC family; AraC family transcriptional regulator 184134 4898721 Rsph17029_3159 Rhodobacter sphaeroides ATCC 17029 AraC family transcriptional regulator YP_001045031.1 183130 R 349101 CDS YP_001045032.1 126463919 4898924 184269..185306 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3515 ABC polyamine/opine transporter, periplasmic binding protein; extracellular solute-binding protein 185306 4898924 Rsph17029_3160 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045032.1 184269 D 349101 CDS YP_001045033.1 126463920 4898925 185313..186302 1 NC_009050.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3516 ABC polyamine/opine transporter, ATPase subunit; ABC transporter 186302 4898925 Rsph17029_3161 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045033.1 185313 D 349101 CDS YP_001045034.1 126463921 4898926 186307..187155 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3517 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 187155 4898926 Rsph17029_3162 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045034.1 186307 D 349101 CDS YP_001045035.1 126463922 4898178 187157..187942 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3518 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 187942 4898178 Rsph17029_3163 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045035.1 187157 D 349101 CDS YP_001045036.1 126463923 4898179 187985..188998 1 NC_009050.1 PFAM: proline racemase; KEGG: rsp:RSP_3519 putative proline racemase; proline racemase 188998 4898179 Rsph17029_3164 Rhodobacter sphaeroides ATCC 17029 proline racemase YP_001045036.1 187985 D 349101 CDS YP_001045037.1 126463924 4898180 complement(189293..190915) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3520 ABC peptide transporter, fused ATPase domains; ABC transporter 190915 4898180 Rsph17029_3165 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045037.1 189293 R 349101 CDS YP_001045038.1 126463925 4899165 complement(190919..191797) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3522 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 191797 4899165 Rsph17029_3166 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045038.1 190919 R 349101 CDS YP_001045039.1 126463926 4899166 complement(191808..192773) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3523 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 192773 4899166 Rsph17029_3167 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045039.1 191808 R 349101 CDS YP_001045040.1 126463927 4899167 complement(192839..194443) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3524 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein 194443 4899167 Rsph17029_3168 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045040.1 192839 R 349101 CDS YP_001045041.1 126463928 4898881 complement(194533..196140) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3525 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein 196140 4898881 Rsph17029_3169 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045041.1 194533 R 349101 CDS YP_001045042.1 126463929 4898882 196302..197774 1 NC_009050.1 PFAM: Amidase; KEGG: rsp:RSP_3526 amidase; amidase 197774 4898882 Rsph17029_3170 Rhodobacter sphaeroides ATCC 17029 amidase YP_001045042.1 196302 D 349101 CDS YP_001045043.1 126463930 4898883 197782..198816 1 NC_009050.1 PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_3527 probable acetylpolyamine aminohydrolase; histone deacetylase superfamily protein 198816 4898883 Rsph17029_3171 Rhodobacter sphaeroides ATCC 17029 histone deacetylase superfamily protein YP_001045043.1 197782 D 349101 CDS YP_001045044.1 126463931 4898957 complement(198840..199490) 1 NC_009050.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3528 transcriptional regulator, TetR family; TetR family transcriptional regulator 199490 4898957 Rsph17029_3172 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001045044.1 198840 R 349101 CDS YP_001045045.1 126463932 4898958 complement(199566..200429) 1 NC_009050.1 PFAM: amidohydrolase 2; KEGG: rsp:RSP_3529 hypothetical protein; amidohydrolase 2 200429 4898958 Rsph17029_3173 Rhodobacter sphaeroides ATCC 17029 amidohydrolase 2 YP_001045045.1 199566 R 349101 CDS YP_001045046.1 126463933 4899156 complement(200434..202029) 1 NC_009050.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_3530 oxidoreductase; FAD dependent oxidoreductase 202029 4899156 Rsph17029_3174 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001045046.1 200434 R 349101 CDS YP_001045047.1 126463934 4899157 complement(202026..203690) 1 NC_009050.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_3532 AMP-binding enzyme; AMP-dependent synthetase and ligase 203690 4899157 Rsph17029_3175 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001045047.1 202026 R 349101 CDS YP_001045048.1 126463935 4899158 complement(203759..205246) 1 NC_009050.1 PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_3533 aldehyde dehydrogenase family protein; betaine-aldehyde dehydrogenase 205246 4899158 Rsph17029_3176 Rhodobacter sphaeroides ATCC 17029 betaine-aldehyde dehydrogenase YP_001045048.1 203759 R 349101 CDS YP_001045049.1 126463936 4898762 complement(205284..206687) 1 NC_009050.1 PFAM: aminotransferase class-III; KEGG: rsp:RSP_3534 hypothetical protein; hypothetical protein 206687 4898762 Rsph17029_3177 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045049.1 205284 R 349101 CDS YP_001045050.1 126463937 4898763 206929..208896 1 NC_009050.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rsp:RSP_3535 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase bifunctional enzyme; 3-hydroxyacyl-CoA dehydrogenase 208896 4898763 Rsph17029_3178 Rhodobacter sphaeroides ATCC 17029 3-hydroxyacyl-CoA dehydrogenase YP_001045050.1 206929 D 349101 CDS YP_001045051.1 126463938 4898764 208961..210160 1 NC_009050.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 210160 4898764 Rsph17029_3179 Rhodobacter sphaeroides ATCC 17029 beta-ketoadipyl CoA thiolase YP_001045051.1 208961 D 349101 CDS YP_001045052.1 126463939 4898962 210364..211392 1 NC_009050.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: rsp:RSP_3537 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 211392 4898962 Rsph17029_3180 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001045052.1 210364 D 349101 CDS YP_001045053.1 126463940 4898963 complement(211444..212196) 1 NC_009050.1 KEGG: rsp:RSP_3538 hypothetical protein; hypothetical protein 212196 4898963 Rsph17029_3181 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045053.1 211444 R 349101 CDS YP_001045054.1 126463941 4898964 complement(212270..220306) 1 NC_009050.1 TIGRFAM: putative outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: rsp:RSP_3540 putative adhesin or RTX toxin; outer membrane adhesin-like protein 220306 4898964 Rsph17029_3182 Rhodobacter sphaeroides ATCC 17029 outer membrane adhesin-like protein YP_001045054.1 212270 R 349101 CDS YP_001045055.1 126463942 4898172 220757..221824 1 NC_009050.1 KEGG: rsp:RSP_3542 hypothetical protein; hypothetical protein 221824 4898172 Rsph17029_3183 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045055.1 220757 D 349101 CDS YP_001045056.1 126463943 4898987 complement(222955..223107) 1 NC_009050.1 KEGG: sil:SPOA0091 IS3 family transposase orfA; hypothetical protein 223107 4898987 Rsph17029_3185 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045056.1 222955 R 349101 CDS YP_001045057.1 126463944 4898174 223159..224205 1 NC_009050.1 PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 224205 4898174 Rsph17029_3186 Rhodobacter sphaeroides ATCC 17029 integrase catalytic subunit YP_001045057.1 223159 D 349101 CDS YP_001045058.1 126463945 4898550 complement(224189..224383) 1 NC_009050.1 KEGG: sil:SPOA0091 IS3 family transposase orfA; IS3 family transposase orfA 224383 4898550 Rsph17029_3187 Rhodobacter sphaeroides ATCC 17029 IS3 family transposase orfA YP_001045058.1 224189 R 349101 CDS YP_001045059.1 126463946 4898551 224763..225797 1 NC_009050.1 KEGG: mgm:Mmc1_0568 putative ATP-binding protein; putative ATP-binding protein 225797 4898551 Rsph17029_3188 Rhodobacter sphaeroides ATCC 17029 putative ATP-binding protein YP_001045059.1 224763 D 349101 CDS YP_001045060.1 126463947 4898552 225814..226335 1 NC_009050.1 KEGG: eli:ELI_14740 hypothetical protein; hypothetical protein 226335 4898552 Rsph17029_3189 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045060.1 225814 D 349101 CDS YP_001045061.1 126463948 4898704 complement(226416..228542) 1 NC_009050.1 KEGG: mmc:Mmcs_4842 hypothetical protein; hypothetical protein 228542 4898704 Rsph17029_3190 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045061.1 226416 R 349101 CDS YP_001045062.1 126463949 4898705 complement(228667..229713) 1 NC_009050.1 PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 229713 4898705 Rsph17029_3191 Rhodobacter sphaeroides ATCC 17029 integrase catalytic subunit YP_001045062.1 228667 R 349101 CDS YP_001045063.1 126463950 4898706 complement(229955..232741) 1 NC_009050.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sfu:Sfum_1438 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 232741 4898706 Rsph17029_3192 Rhodobacter sphaeroides ATCC 17029 type III restriction enzyme, res subunit YP_001045063.1 229955 R 349101 CDS YP_001045064.1 126463951 4898680 233396..233866 1 NC_009050.1 hypothetical protein 233866 4898680 Rsph17029_3193 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045064.1 233396 D 349101 CDS YP_001045065.1 126463952 4898681 233973..235844 1 NC_009050.1 KEGG: rpb:RPB_2536 hypothetical protein; hypothetical protein 235844 4898681 Rsph17029_3194 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045065.1 233973 D 349101 CDS YP_001045066.1 126463953 4898910 complement(237743..238093) 1 NC_009050.1 PFAM: IS66 Orf2 family protein; KEGG: rle:pRL70161 putative transposase-related protein; IS66 Orf2 family protein 238093 4898910 Rsph17029_3197 Rhodobacter sphaeroides ATCC 17029 IS66 Orf2 family protein YP_001045066.1 237743 R 349101 CDS YP_001045067.1 126463954 4898911 complement(238090..238497) 1 NC_009050.1 PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PA00103 putative insertion sequence transposase protein; transposase IS3/IS911 family protein 238497 4898911 Rsph17029_3198 Rhodobacter sphaeroides ATCC 17029 transposase IS3/IS911 family protein YP_001045067.1 238090 R 349101 CDS YP_001045068.1 126463955 4898685 238713..240041 1 NC_009050.1 KEGG: bja:bll1926 hypothetical protein; hypothetical protein 240041 4898685 Rsph17029_3199 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045068.1 238713 D 349101 CDS YP_001045069.1 126463956 4898686 240038..242017 1 NC_009050.1 KEGG: xac:XAC2444 hypothetical protein; ATPase-like protein 242017 4898686 Rsph17029_3200 Rhodobacter sphaeroides ATCC 17029 ATPase-like protein YP_001045069.1 240038 D 349101 CDS YP_001045070.1 126463957 4898687 complement(242521..244353) 1 NC_009050.1 KEGG: rsp:RSP_2500 hypothetical protein; hypothetical protein 244353 4898687 Rsph17029_3201 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045070.1 242521 R 349101 CDS YP_001045071.1 126463958 4898562 complement(244614..245642) 1 NC_009050.1 KEGG: rde:RD1_4047 transposition protein, putative; transposition protein 245642 4898562 Rsph17029_3202 Rhodobacter sphaeroides ATCC 17029 transposition protein YP_001045071.1 244614 R 349101 CDS YP_001045072.1 126463959 4898563 complement(246234..252605) 1 NC_009050.1 KEGG: rle:RL2132 hypothetical protein; superfamily I DNA/RNA helicase 252605 4898563 Rsph17029_3203 Rhodobacter sphaeroides ATCC 17029 superfamily I DNA/RNA helicase YP_001045072.1 246234 R 349101 CDS YP_001045073.1 126463960 4898564 complement(253005..253358) 1 NC_009050.1 hypothetical protein 253358 4898564 Rsph17029_3204 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045073.1 253005 R 349101 CDS YP_001045074.1 126463961 4898214 complement(253793..254848) 1 NC_009050.1 KEGG: rpc:RPC_3216 hypothetical protein; hypothetical protein 254848 4898214 Rsph17029_3205 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045074.1 253793 R 349101 CDS YP_001045075.1 126463962 4898215 complement(255005..256669) 1 NC_009050.1 KEGG: mca:MCA0474 ATP-dependent DNA helicase, UvrD/REP family; superfamily I DNA/RNA helicase-like protein 256669 4898215 Rsph17029_3206 Rhodobacter sphaeroides ATCC 17029 superfamily I DNA/RNA helicase-like protein YP_001045075.1 255005 R 349101 CDS YP_001045076.1 126463963 4898216 256771..258030 1 NC_009050.1 KEGG: ppu:PP_4447 hypothetical protein; hypothetical protein 258030 4898216 Rsph17029_3207 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045076.1 256771 D 349101 CDS YP_001045077.1 126463964 4898157 258040..259779 1 NC_009050.1 KEGG: ppu:PP_4448 hypothetical protein; hypothetical protein 259779 4898157 Rsph17029_3208 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045077.1 258040 D 349101 CDS YP_001045078.1 126463965 4898158 261366..262058 1 NC_009050.1 KEGG: rde:RD1_4051 hypothetical protein; hypothetical protein 262058 4898158 Rsph17029_3209 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045078.1 261366 D 349101 CDS YP_001045079.1 126463966 4898159 262055..264403 1 NC_009050.1 PFAM: Integrase, catalytic region; KEGG: rde:RD1_4048 transposase, putative; integrase catalytic subunit 264403 4898159 Rsph17029_3210 Rhodobacter sphaeroides ATCC 17029 integrase catalytic subunit YP_001045079.1 262055 D 349101 CDS YP_001045080.1 126463967 4898505 complement(264580..265005) 1 NC_009050.1 hypothetical protein 265005 4898505 Rsph17029_3211 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045080.1 264580 R 349101 CDS YP_001045081.1 126463968 4898506 complement(265078..265566) 1 NC_009050.1 hypothetical protein 265566 4898506 Rsph17029_3212 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045081.1 265078 R 349101 CDS YP_001045082.1 126463969 4898507 complement(265995..266948) 1 NC_009050.1 KEGG: rde:RD1_0796 transposition protein, putative; hypothetical protein 266948 4898507 Rsph17029_3213 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045082.1 265995 R 349101 CDS YP_001045083.1 126463970 4898688 complement(266945..269287) 1 NC_009050.1 KEGG: rde:RD1_0797 transposase, putative; hypothetical protein 269287 4898688 Rsph17029_3214 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045083.1 266945 R 349101 CDS YP_001045084.1 126463971 4898689 complement(269284..270189) 1 NC_009050.1 KEGG: bms:BR0728 hypothetical protein; hypothetical protein 270189 4898689 Rsph17029_3215 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045084.1 269284 R 349101 CDS YP_001045085.1 126463972 4898730 complement(270597..271697) 1 NC_009050.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: rde:RD1_4059 Lon protease, putative; ATPase central domain-containing protein 271697 4898730 Rsph17029_3216 Rhodobacter sphaeroides ATCC 17029 ATPase central domain-containing protein YP_001045085.1 270597 R 349101 CDS YP_001045086.1 126463973 4898731 271707..272129 1 NC_009050.1 hypothetical protein 272129 4898731 Rsph17029_3217 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045086.1 271707 D 349101 CDS YP_001045087.1 126463974 4898732 272126..272704 1 NC_009050.1 hypothetical protein 272704 4898732 Rsph17029_3218 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045087.1 272126 D 349101 CDS YP_001045088.1 126463975 4898796 complement(272921..273742) 1 NC_009050.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: bbr:BB4812 hypothetical protein; hypothetical protein 273742 4898796 Rsph17029_3219 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045088.1 272921 R 349101 CDS YP_001045089.1 126463976 4898797 273863..275152 1 NC_009050.1 KEGG: neu:NE1882 hypothetical protein; hypothetical protein 275152 4898797 Rsph17029_3220 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045089.1 273863 D 349101 CDS YP_001045090.1 126463977 4898798 275149..275676 1 NC_009050.1 KEGG: net:Neut_1966 conserved hypothetical protein; hypothetical protein 275676 4898798 Rsph17029_3221 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045090.1 275149 D 349101 CDS YP_001045091.1 126463978 4898577 275968..276525 1 NC_009050.1 KEGG: sil:SPO0624 hypothetical protein; hypothetical protein 276525 4898577 Rsph17029_3222 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045091.1 275968 D 349101 CDS YP_001045092.1 126463979 4898578 complement(276807..278189) 1 NC_009050.1 PFAM: transposase, IS4 family protein; KEGG: rde:RD1_3444 transposase, putative; transposase, IS4 family protein 278189 4898578 Rsph17029_3223 Rhodobacter sphaeroides ATCC 17029 transposase, IS4 family protein YP_001045092.1 276807 R 349101 CDS YP_001045093.1 126463980 4898579 279523..280839 1 NC_009050.1 KEGG: rpe:RPE_1034 hypothetical protein; hypothetical protein 280839 4898579 Rsph17029_3224 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045093.1 279523 D 349101 CDS YP_001045094.1 126463981 4898580 282043..284490 1 NC_009050.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; EcoEI R, C-terminal domain protein; SMART: DEAD-like helicases-like; KEGG: nwi:Nwi_1255 DEAD/DEAH box helicase; EcoEI R domain-containing protein 284490 4898580 Rsph17029_3225 Rhodobacter sphaeroides ATCC 17029 EcoEI R domain-containing protein YP_001045094.1 282043 D 349101 CDS YP_001045095.1 126463982 4898581 284495..285940 1 NC_009050.1 PFAM: N-6 DNA methylase; KEGG: nwi:Nwi_1254 N-6 DNA methylase; N-6 DNA methylase 285940 4898581 Rsph17029_3226 Rhodobacter sphaeroides ATCC 17029 N-6 DNA methylase YP_001045095.1 284495 D 349101 CDS YP_001045096.1 126463983 4898582 285937..287664 1 NC_009050.1 PFAM: restriction modification system DNA specificity domain; KEGG: nwi:Nwi_1253 type I restriction enzyme EcoAI specificity protein; restriction modification system DNA specificity subunit 287664 4898582 Rsph17029_3227 Rhodobacter sphaeroides ATCC 17029 restriction modification system DNA specificity subunit YP_001045096.1 285937 D 349101 CDS YP_001045097.1 126463984 4898682 287661..288602 1 NC_009050.1 hypothetical protein 288602 4898682 Rsph17029_3228 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045097.1 287661 D 349101 CDS YP_001045098.1 126463985 4898683 288903..290735 1 NC_009050.1 KEGG: nha:Nham_2090 hypothetical protein; hypothetical protein 290735 4898683 Rsph17029_3229 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045098.1 288903 D 349101 CDS YP_001045099.1 126463986 4898684 complement(290885..293152) 1 NC_009050.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit, N terminal domain protein; KEGG: rsp:RSP_3547 ribonucleotide reductase; ribonucleoside-diphosphate reductase 293152 4898684 Rsph17029_3230 Rhodobacter sphaeroides ATCC 17029 ribonucleoside-diphosphate reductase YP_001045099.1 290885 R 349101 CDS YP_001045100.1 126463987 4898230 293304..293735 1 NC_009050.1 PFAM: Uncharacterised conserved protein UCP032025; KEGG: rsp:RSP_3548 hypothetical protein; hypothetical protein 293735 4898230 Rsph17029_3231 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045100.1 293304 D 349101 CDS YP_001045101.1 126463988 4898231 complement(293728..294438) 1 NC_009050.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 294438 hisG 4898231 hisG Rhodobacter sphaeroides ATCC 17029 ATP phosphoribosyltransferase catalytic subunit YP_001045101.1 293728 R 349101 CDS YP_001045102.1 126463989 4898988 complement(295530..297161) 1 NC_009050.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 297161 hisS 4898988 hisS Rhodobacter sphaeroides ATCC 17029 histidyl-tRNA synthetase YP_001045102.1 295530 R 349101 CDS YP_001045103.1 126463990 4898138 297249..297449 1 NC_009050.1 KEGG: rsp:RSP_3552 SlyX protein; SlyX protein 297449 4898138 Rsph17029_3235 Rhodobacter sphaeroides ATCC 17029 SlyX protein YP_001045103.1 297249 D 349101 CDS YP_001045104.1 126463991 4898139 complement(297592..301083) 1 NC_009050.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 301083 dnaE 4898139 dnaE Rhodobacter sphaeroides ATCC 17029 DNA polymerase III subunit alpha YP_001045104.1 297592 R 349101 CDS YP_001045105.1 126463992 4898148 301266..302723 1 NC_009050.1 PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: rsp:RSP_3554 xanthine dehydrogenase, small subunit; molybdopterin dehydrogenase 302723 4898148 Rsph17029_3237 Rhodobacter sphaeroides ATCC 17029 molybdopterin dehydrogenase YP_001045105.1 301266 D 349101 CDS YP_001045106.1 126463993 4898149 302720..305197 1 NC_009050.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_3555 xanthine dehydrogenase, large subunit; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 305197 4898149 Rsph17029_3238 Rhodobacter sphaeroides ATCC 17029 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_001045106.1 302720 D 349101 CDS YP_001045107.1 126463994 4898150 305190..306131 1 NC_009050.1 PFAM: protein of unknown function DUF182; KEGG: rsp:RSP_3556 xanthine dehydrogenase chaperone/MPT insertion protein; hypothetical protein 306131 4898150 Rsph17029_3239 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045107.1 305190 D 349101 CDS YP_001045108.1 126463995 4898217 306128..307651 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3557 ABC transporter, fused ATPase domains; ABC transporter 307651 4898217 Rsph17029_3240 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045108.1 306128 D 349101 CDS YP_001045109.1 126463996 4898218 307670..308752 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3558 ABC transporter, inner membrane subunit; inner-membrane translocator 308752 4898218 Rsph17029_3241 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045109.1 307670 D 349101 CDS YP_001045110.1 126463997 4898219 308752..309684 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3559 ABC transporter, inner membrane subunit; inner-membrane translocator 309684 4898219 Rsph17029_3242 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045110.1 308752 D 349101 CDS YP_001045111.1 126463998 4899032 309731..310825 1 NC_009050.1 PFAM: basic membrane lipoprotein; KEGG: rsp:RSP_3560 possible ABC transporter, periplasmic binding protein; basic membrane lipoprotein 310825 4899032 Rsph17029_3243 Rhodobacter sphaeroides ATCC 17029 basic membrane lipoprotein YP_001045111.1 309731 D 349101 CDS YP_001045112.1 126463999 4899033 311053..311610 1 NC_009050.1 KEGG: rsp:RSP_3561 hypothetical protein; hypothetical protein 311610 4899033 Rsph17029_3244 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045112.1 311053 D 349101 CDS YP_001045113.1 126464000 4899034 311643..312923 1 NC_009050.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3562 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 312923 4899034 Rsph17029_3245 Rhodobacter sphaeroides ATCC 17029 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001045113.1 311643 D 349101 CDS YP_001045114.1 126464001 4898115 312928..314034 1 NC_009050.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_3563 putative FAD-dependent glycerol-3-phosphate dehydrogenase protein; FAD dependent oxidoreductase 314034 4898115 Rsph17029_3246 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001045114.1 312928 D 349101 CDS YP_001045115.1 126464002 4898116 314031..314666 1 NC_009050.1 PFAM: protein of unknown function DUF938; KEGG: rsp:RSP_3564 generic methyltransferase; hypothetical protein 314666 4898116 Rsph17029_3247 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045115.1 314031 D 349101 CDS YP_001045116.1 126464003 4898117 314933..315724 1 NC_009050.1 PFAM: glycoside hydrolase, family 25; KEGG: rsp:RSP_3565 glycoside hydrolase, family 25; glycoside hydrolase family protein 315724 4898117 Rsph17029_3248 Rhodobacter sphaeroides ATCC 17029 glycoside hydrolase family protein YP_001045116.1 314933 D 349101 CDS YP_001045117.1 126464004 4898275 complement(315809..318304) 1 NC_009050.1 PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: rsp:RSP_3566 dimethylglycine dehydrogenase; FAD dependent oxidoreductase 318304 4898275 Rsph17029_3249 Rhodobacter sphaeroides ATCC 17029 FAD dependent oxidoreductase YP_001045117.1 315809 R 349101 CDS YP_001045118.1 126464005 4898276 complement(318539..319321) 1 NC_009050.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: rsp:RSP_3567 ABC zinc tranporter, inner membrane subunit ZnuB; ABC-3 protein 319321 4898276 Rsph17029_3250 Rhodobacter sphaeroides ATCC 17029 ABC-3 protein YP_001045118.1 318539 R 349101 CDS YP_001045119.1 126464006 4898277 complement(319314..320045) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3568 ABC zinc transporter, ATPase subunit ZnuC; ABC transporter 320045 4898277 Rsph17029_3251 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045119.1 319314 R 349101 CDS YP_001045120.1 126464007 4899190 complement(320042..320533) 1 NC_009050.1 KEGG: rsp:RSP_3569 zinc-uptake regulator, Zur; ferric uptake regulator family protein 320533 4899190 Rsph17029_3252 Rhodobacter sphaeroides ATCC 17029 ferric uptake regulator family protein YP_001045120.1 320042 R 349101 CDS YP_001045121.1 126464008 4899191 320602..321645 1 NC_009050.1 PFAM: periplasmic solute binding protein; KEGG: rsp:RSP_3571 ABC zinc transporter, periplasmic binding protein ZnuA; periplasmic solute binding protein 321645 4899191 Rsph17029_3253 Rhodobacter sphaeroides ATCC 17029 periplasmic solute binding protein YP_001045121.1 320602 D 349101 CDS YP_001045122.1 126464009 4899192 321694..322677 1 NC_009050.1 PFAM: Aldose 1-epimerase; KEGG: rsp:RSP_3572 putative aldose 1-epimerase protein; aldose 1-epimerase 322677 4899192 Rsph17029_3254 Rhodobacter sphaeroides ATCC 17029 aldose 1-epimerase YP_001045122.1 321694 D 349101 CDS YP_001045123.1 126464010 4899142 322891..323103 1 NC_009050.1 involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins; gas vesicle synthesis protein GvpA 323103 4899142 Rsph17029_3255 Rhodobacter sphaeroides ATCC 17029 gas vesicle synthesis protein GvpA YP_001045123.1 322891 D 349101 CDS YP_001045124.1 126464011 4899183 complement(323112..324683) 1 NC_009050.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rsp:RSP_3574 putative histidine ammonia-lyase; histidine ammonia-lyase 324683 4899183 Rsph17029_3256 Rhodobacter sphaeroides ATCC 17029 histidine ammonia-lyase YP_001045124.1 323112 R 349101 CDS YP_001045125.1 126464012 4899184 complement(324747..325079) 1 NC_009050.1 PFAM: Gas vesicle K; KEGG: rsp:RSP_3575 putative gas vesicle synthesis protein; gas vesicle K 325079 4899184 Rsph17029_3257 Rhodobacter sphaeroides ATCC 17029 gas vesicle K YP_001045125.1 324747 R 349101 CDS YP_001045126.1 126464013 4899029 complement(325076..325702) 1 NC_009050.1 KEGG: rsp:RSP_6183 hypothetical protein; hypothetical protein 325702 4899029 Rsph17029_3258 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045126.1 325076 R 349101 CDS YP_001045127.1 126464014 4899030 complement(325895..326593) 1 NC_009050.1 KEGG: rsp:RSP_6233 gas vesicle operon protein; gas vesicle operon protein 326593 4899030 Rsph17029_3259 Rhodobacter sphaeroides ATCC 17029 gas vesicle operon protein YP_001045127.1 325895 R 349101 CDS YP_001045128.1 126464015 4899031 complement(326590..327465) 1 NC_009050.1 PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: rsp:RSP_3576 hypothetical protein; gas vesicle synthesis GvpLGvpF 327465 4899031 Rsph17029_3260 Rhodobacter sphaeroides ATCC 17029 gas vesicle synthesis GvpLGvpF YP_001045128.1 326590 R 349101 CDS YP_001045129.1 126464016 4898825 complement(327719..327952) 1 NC_009050.1 KEGG: rsp:RSP_3577 putative gas vesicle synthesis protein; putative gas vesicle synthesis protein 327952 4898825 Rsph17029_3261 Rhodobacter sphaeroides ATCC 17029 putative gas vesicle synthesis protein YP_001045129.1 327719 R 349101 CDS YP_001045130.1 126464017 4898826 complement(327952..328716) 1 NC_009050.1 PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: rsp:RSP_3578 putative gas vesicle synthesis protein; gas vesicle synthesis GvpLGvpF 328716 4898826 Rsph17029_3262 Rhodobacter sphaeroides ATCC 17029 gas vesicle synthesis GvpLGvpF YP_001045130.1 327952 R 349101 CDS YP_001045131.1 126464018 4898827 complement(328713..329246) 1 NC_009050.1 KEGG: rsp:RSP_3579 heat shock protein HSP20; heat shock protein HSP20 329246 4898827 Rsph17029_3263 Rhodobacter sphaeroides ATCC 17029 heat shock protein HSP20 YP_001045131.1 328713 R 349101 CDS YP_001045132.1 126464019 4898439 complement(329248..329562) 1 NC_009050.1 PFAM: gas vesicle protein GVPa; KEGG: rsp:RSP_3580 gas vesicle protein GVPa; gas vesicle protein GvpA 329562 4898439 Rsph17029_3264 Rhodobacter sphaeroides ATCC 17029 gas vesicle protein GvpA YP_001045132.1 329248 R 349101 CDS YP_001045133.1 126464020 4898440 complement(329559..329870) 1 NC_009050.1 PFAM: Gas vesicle synthesis family protein; KEGG: rsp:RSP_3581 hypothetical protein; gas vesicle synthesis family protein 329870 4898440 Rsph17029_3265 Rhodobacter sphaeroides ATCC 17029 gas vesicle synthesis family protein YP_001045133.1 329559 R 349101 CDS YP_001045134.1 126464021 4898441 complement(329884..330108) 1 NC_009050.1 KEGG: rsp:RSP_6184 hypothetical protein; hypothetical protein 330108 4898441 Rsph17029_3266 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045134.1 329884 R 349101 CDS YP_001045135.1 126464022 4898133 complement(330105..331055) 1 NC_009050.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_3582 ATPase; ATPase 331055 4898133 Rsph17029_3267 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001045135.1 330105 R 349101 CDS YP_001045136.1 126464023 4898134 complement(331163..332383) 1 NC_009050.1 PFAM: protein of unknown function DUF989; KEGG: rsp:RSP_3583 class I monoheme cytochrome c; hypothetical protein 332383 4898134 Rsph17029_3268 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045136.1 331163 R 349101 CDS YP_001045137.1 126464024 4898724 332588..332959 1 NC_009050.1 KEGG: rsp:RSP_3584 hypothetical protein; hypothetical protein 332959 4898724 Rsph17029_3269 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045137.1 332588 D 349101 CDS YP_001045138.1 126464025 4898725 complement(333049..334278) 1 NC_009050.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 334278 4898725 Rsph17029_3270 Rhodobacter sphaeroides ATCC 17029 tryptophan synthase subunit beta YP_001045138.1 333049 R 349101 CDS YP_001045139.1 126464026 4898726 complement(334293..334739) 1 NC_009050.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_3586 putative aromatic pathway regulator; N-acetyltransferase GCN5 334739 4898726 Rsph17029_3271 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001045139.1 334293 R 349101 CDS YP_001045140.1 126464027 4898895 complement(334736..335374) 1 NC_009050.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 335374 4898895 Rsph17029_3272 Rhodobacter sphaeroides ATCC 17029 N-(5'-phosphoribosyl)anthranilate isomerase YP_001045140.1 334736 R 349101 CDS YP_001045141.1 126464028 4898896 complement(335374..335754) 1 NC_009050.1 KEGG: rsp:RSP_3588 hypothetical protein; hypothetical protein 335754 4898896 Rsph17029_3273 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045141.1 335374 R 349101 CDS YP_001045142.1 126464029 4898897 complement(335795..336076) 1 NC_009050.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 336076 ihfB 4898897 ihfB Rhodobacter sphaeroides ATCC 17029 integration host factor subunit beta YP_001045142.1 335795 R 349101 CDS YP_001045143.1 126464030 4898278 complement(336251..337936) 1 NC_009050.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 337936 rpsA 4898278 rpsA Rhodobacter sphaeroides ATCC 17029 30S ribosomal protein S1 YP_001045143.1 336251 R 349101 CDS YP_001045144.1 126464031 4898279 complement(338044..338679) 1 NC_009050.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 338679 cmk 4898279 cmk Rhodobacter sphaeroides ATCC 17029 cytidylate kinase YP_001045144.1 338044 R 349101 CDS YP_001045145.1 126464032 4898280 complement(338736..340073) 1 NC_009050.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 340073 4898280 Rsph17029_3277 Rhodobacter sphaeroides ATCC 17029 3-phosphoshikimate 1-carboxyvinyltransferase YP_001045145.1 338736 R 349101 CDS YP_001045146.1 126464033 4898281 complement(340290..341015) 1 NC_009050.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 341015 trmB 4898281 trmB Rhodobacter sphaeroides ATCC 17029 tRNA (guanine-N(7)-)-methyltransferase YP_001045146.1 340290 R 349101 CDS YP_001045147.1 126464034 4898282 341281..341817 1 NC_009050.1 KEGG: rsp:RSP_3594 antifreeze protein, type I; antifreeze protein, type I 341817 4898282 Rsph17029_3279 Rhodobacter sphaeroides ATCC 17029 antifreeze protein, type I YP_001045147.1 341281 D 349101 CDS YP_001045148.1 126464035 4898283 complement(341947..343113) 1 NC_009050.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 343113 4898283 Rsph17029_3280 Rhodobacter sphaeroides ATCC 17029 S-adenosylmethionine synthetase YP_001045148.1 341947 R 349101 CDS YP_001045149.1 126464036 4898733 complement(343202..344689) 1 NC_009050.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3596 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 344689 4898733 Rsph17029_3281 Rhodobacter sphaeroides ATCC 17029 apolipoprotein N-acyltransferase YP_001045149.1 343202 R 349101 CDS YP_001045150.1 126464037 4898734 complement(344857..345804) 1 NC_009050.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: rsp:RSP_3597 CorC/HlyC family protein with CBS domains; hypothetical protein 345804 4898734 Rsph17029_3282 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045150.1 344857 R 349101 CDS YP_001045151.1 126464038 4898735 complement(345844..346347) 1 NC_009050.1 PFAM: protein of unknown function UPF0054; KEGG: rsp:RSP_3598 hypothetical protein; hypothetical protein 346347 4898735 Rsph17029_3283 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045151.1 345844 R 349101 CDS YP_001045152.1 126464039 4898848 complement(346331..347371) 1 NC_009050.1 PFAM: PhoH family protein; KEGG: rsp:RSP_3599 hypothetical protein; PhoH family protein 347371 4898848 Rsph17029_3284 Rhodobacter sphaeroides ATCC 17029 PhoH family protein YP_001045152.1 346331 R 349101 CDS YP_001045153.1 126464040 4898849 complement(347514..348824) 1 NC_009050.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 348824 4898849 Rsph17029_3285 Rhodobacter sphaeroides ATCC 17029 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001045153.1 347514 R 349101 CDS YP_001045154.1 126464041 4898850 complement(348996..349622) 1 NC_009050.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rsp:RSP_3601 lipolytic enzyme, G-D-S-L family; GDSL family lipase 349622 4898850 Rsph17029_3286 Rhodobacter sphaeroides ATCC 17029 GDSL family lipase YP_001045154.1 348996 R 349101 CDS YP_001045155.1 126464042 4898779 349681..350370 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3602 ABC efflux transporter, ATPase subunit; ABC transporter 350370 4898779 Rsph17029_3287 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045155.1 349681 D 349101 CDS YP_001045156.1 126464043 4898780 350367..352874 1 NC_009050.1 PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_3603 possible ABC efflux tranporter, fused inner membrane domains; hypothetical protein 352874 4898780 Rsph17029_3288 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045156.1 350367 D 349101 CDS YP_001045157.1 126464044 4898493 352876..353292 1 NC_009050.1 KEGG: rsp:RSP_6185 hypothetical protein; hypothetical protein 353292 4898493 Rsph17029_3289 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045157.1 352876 D 349101 CDS YP_001045158.1 126464045 4898494 353614..354666 1 NC_009050.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 354666 4898494 Rsph17029_3290 Rhodobacter sphaeroides ATCC 17029 tRNA 2-selenouridine synthase YP_001045158.1 353614 D 349101 CDS YP_001045159.1 126464046 4898495 354667..355767 1 NC_009050.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3605 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 355767 4898495 Rsph17029_3291 Rhodobacter sphaeroides ATCC 17029 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001045159.1 354667 D 349101 CDS YP_001045160.1 126464047 4898312 355855..357153 1 NC_009050.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_3606 sigma54-2 (RNA polymerase sigma-54 factor); RNA polymerase sigma 54 subunit RpoN 357153 4898312 Rsph17029_3292 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma 54 subunit RpoN YP_001045160.1 355855 D 349101 CDS YP_001045161.1 126464048 4898313 357253..359280 1 NC_009050.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rsp:RSP_3607 hypothetical protein; hydantoinase/oxoprolinase 359280 4898313 Rsph17029_3293 Rhodobacter sphaeroides ATCC 17029 hydantoinase/oxoprolinase YP_001045161.1 357253 D 349101 CDS YP_001045162.1 126464049 4898245 complement(359389..360471) 1 NC_009050.1 PFAM: phage integrase family protein; KEGG: rsp:RSP_3623 putative integrase; phage integrase family protein 360471 4898245 Rsph17029_3294 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001045162.1 359389 R 349101 CDS YP_001045163.1 126464050 4898130 complement(360652..360906) 1 NC_009050.1 hypothetical protein 360906 4898130 Rsph17029_3295 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045163.1 360652 R 349101 CDS YP_001045164.1 126464051 4898131 complement(360903..361664) 1 NC_009050.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: nwi:Nwi_0847 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein 361664 4898131 Rsph17029_3296 Rhodobacter sphaeroides ATCC 17029 DNA methylase N-4/N-6 domain-containing protein YP_001045164.1 360903 R 349101 CDS YP_001045165.1 126464052 4898132 complement(361661..362320) 1 NC_009050.1 KEGG: rsp:RSP_3624 hypothetical protein; hypothetical protein 362320 4898132 Rsph17029_3297 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045165.1 361661 R 349101 CDS YP_001045166.1 126464053 4899108 complement(362495..362737) 1 NC_009050.1 hypothetical protein 362737 4899108 Rsph17029_3298 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045166.1 362495 R 349101 CDS YP_001045167.1 126464054 4899109 complement(362742..363002) 1 NC_009050.1 KEGG: rsp:RSP_3794 hypothetical protein; hypothetical protein 363002 4899109 Rsph17029_3299 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045167.1 362742 R 349101 CDS YP_001045168.1 126464055 4899110 complement(363489..363767) 1 NC_009050.1 hypothetical protein 363767 4899110 Rsph17029_3300 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045168.1 363489 R 349101 CDS YP_001045169.1 126464056 4898972 complement(363764..364027) 1 NC_009050.1 KEGG: nwi:Nwi_1563 hypothetical protein; hypothetical protein 364027 4898972 Rsph17029_3301 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045169.1 363764 R 349101 CDS YP_001045170.1 126464057 4898973 complement(364267..365115) 1 NC_009050.1 KEGG: rsp:RSP_3796 hypothetical protein; hypothetical protein 365115 4898973 Rsph17029_3302 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045170.1 364267 R 349101 CDS YP_001045171.1 126464058 4898974 complement(365138..365464) 1 NC_009050.1 KEGG: rsp:RSP_3797 hypothetical protein; hypothetical protein 365464 4898974 Rsph17029_3303 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045171.1 365138 R 349101 CDS YP_001045172.1 126464059 4898160 complement(365577..365909) 1 NC_009050.1 KEGG: rsp:RSP_3799 hypothetical protein; hypothetical protein 365909 4898160 Rsph17029_3304 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045172.1 365577 R 349101 CDS YP_001045173.1 126464060 4898161 367132..367392 1 NC_009050.1 KEGG: rsp:RSP_3772 hypothetical protein; hypothetical protein 367392 4898161 Rsph17029_3305 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045173.1 367132 D 349101 CDS YP_001045174.1 126464061 4898162 367389..367640 1 NC_009050.1 KEGG: rsp:RSP_3773 hypothetical protein; hypothetical protein 367640 4898162 Rsph17029_3306 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045174.1 367389 D 349101 CDS YP_001045175.1 126464062 4899044 367783..368301 1 NC_009050.1 KEGG: rsp:RSP_3774 hypothetical protein; hypothetical protein 368301 4899044 Rsph17029_3307 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045175.1 367783 D 349101 CDS YP_001045176.1 126464063 4899045 368298..368765 1 NC_009050.1 KEGG: rsp:RSP_3775 hypothetical protein; hypothetical protein 368765 4899045 Rsph17029_3308 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045176.1 368298 D 349101 CDS YP_001045177.1 126464064 4898356 368762..369055 1 NC_009050.1 PFAM: Chromosomal replication initiator, DnaA C-terminal domain; KEGG: rsp:RSP_6202 hypothetical protein; chromosomal replication initiator DnaA domain-containing protein 369055 4898356 Rsph17029_3309 Rhodobacter sphaeroides ATCC 17029 chromosomal replication initiator DnaA domain-containing protein YP_001045177.1 368762 D 349101 CDS YP_001045178.1 126464065 4898357 369045..369689 1 NC_009050.1 KEGG: rsp:RSP_2074 hypothetical protein; hypothetical protein 369689 4898357 Rsph17029_3310 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045178.1 369045 D 349101 CDS YP_001045179.1 126464066 4898358 369898..370482 1 NC_009050.1 KEGG: rsp:RSP_3777 hypothetical protein; hypothetical protein 370482 4898358 Rsph17029_3311 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045179.1 369898 D 349101 CDS YP_001045180.1 126464067 4898109 370479..371141 1 NC_009050.1 KEGG: rsp:RSP_6033 hypothetical protein; hypothetical protein 371141 4898109 Rsph17029_3312 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045180.1 370479 D 349101 CDS YP_001045181.1 126464068 4898110 371248..372147 1 NC_009050.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsp:RSP_2072 putative phage-related holin protein; HNH endonuclease 372147 4898110 Rsph17029_3313 Rhodobacter sphaeroides ATCC 17029 HNH endonuclease YP_001045181.1 371248 D 349101 CDS YP_001045182.1 126464069 4898111 372190..372666 1 NC_009050.1 KEGG: rsp:RSP_2071 hypothetical protein; hypothetical protein 372666 4898111 Rsph17029_3314 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045182.1 372190 D 349101 CDS YP_001045183.1 126464070 4898268 372668..374377 1 NC_009050.1 PFAM: phage Terminase; KEGG: rsp:RSP_2070 putative phage-related terminase; phage terminase 374377 4898268 Rsph17029_3315 Rhodobacter sphaeroides ATCC 17029 phage terminase YP_001045183.1 372668 D 349101 CDS YP_001045184.1 126464071 4898269 374377..375627 1 NC_009050.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: rsp:RSP_2069 putative phage portal protein, HK97 family; HK97 family phage portal protein 375627 4898269 Rsph17029_3316 Rhodobacter sphaeroides ATCC 17029 HK97 family phage portal protein YP_001045184.1 374377 D 349101 CDS YP_001045185.1 126464072 4898270 375624..376463 1 NC_009050.1 PFAM: peptidase S14, ClpP; KEGG: rsp:RSP_2068 putative ClpP-like protease; peptidase S14, ClpP 376463 4898270 Rsph17029_3317 Rhodobacter sphaeroides ATCC 17029 peptidase S14, ClpP YP_001045185.1 375624 D 349101 CDS YP_001045186.1 126464073 4898538 376476..377777 1 NC_009050.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: rsp:RSP_2067 putative prophage LambdaSo, major capsid protein, HK97 family; HK97 family phage major capsid protein 377777 4898538 Rsph17029_3318 Rhodobacter sphaeroides ATCC 17029 HK97 family phage major capsid protein YP_001045186.1 376476 D 349101 CDS YP_001045187.1 126464074 4898539 377848..378258 1 NC_009050.1 KEGG: rsp:RSP_6032 potential TolA; hypothetical protein 378258 4898539 Rsph17029_3319 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045187.1 377848 D 349101 CDS YP_001045188.1 126464075 4898540 378255..378596 1 NC_009050.1 KEGG: rsp:RSP_6031 hypothetical protein; hypothetical protein 378596 4898540 Rsph17029_3320 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045188.1 378255 D 349101 CDS YP_001045189.1 126464076 4898370 378593..378928 1 NC_009050.1 TIGRFAM: phage head-tail adaptor, putative; KEGG: rsp:RSP_2066 hypothetical protein; phage head-tail adaptor, putative 378928 4898370 Rsph17029_3321 Rhodobacter sphaeroides ATCC 17029 phage head-tail adaptor, putative YP_001045189.1 378593 D 349101 CDS YP_001045190.1 126464077 4898371 379043..379603 1 NC_009050.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: rsp:RSP_2065 hypothetical protein; HK97 family phage protein 379603 4898371 Rsph17029_3322 Rhodobacter sphaeroides ATCC 17029 HK97 family phage protein YP_001045190.1 379043 D 349101 CDS YP_001045191.1 126464078 4898372 379600..379749 1 NC_009050.1 KEGG: rsp:RSP_6013 hypothetical protein; hypothetical protein 379749 4898372 Rsph17029_3323 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045191.1 379600 D 349101 CDS YP_001045192.1 126464079 4899072 379935..380315 1 NC_009050.1 KEGG: rsp:RSP_2064 hypothetical protein; hypothetical protein 380315 4899072 Rsph17029_3324 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045192.1 379935 D 349101 CDS YP_001045193.1 126464080 4899073 380325..380768 1 NC_009050.1 KEGG: rsp:RSP_2063 hypothetical protein; hypothetical protein 380768 4899073 Rsph17029_3325 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045193.1 380325 D 349101 CDS YP_001045194.1 126464081 4899074 380765..381145 1 NC_009050.1 KEGG: rsp:RSP_2062 hypothetical protein; hypothetical protein 381145 4899074 Rsph17029_3326 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045194.1 380765 D 349101 CDS YP_001045195.1 126464082 4898271 381220..381465 1 NC_009050.1 KEGG: rsp:RSP_1637 hypothetical protein; hypothetical protein 381465 4898271 Rsph17029_3327 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045195.1 381220 D 349101 CDS YP_001045196.1 126464083 4898272 381827..386725 1 NC_009050.1 KEGG: rsp:RSP_3791 hypothetical protein; hypothetical protein 386725 4898272 Rsph17029_3328 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045196.1 381827 D 349101 CDS YP_001045197.1 126464084 4899105 386725..387615 1 NC_009050.1 KEGG: rsp:RSP_1635 hypothetical protein; hypothetical protein 387615 4899105 Rsph17029_3329 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045197.1 386725 D 349101 CDS YP_001045198.1 126464085 4899106 387632..389116 1 NC_009050.1 KEGG: rsp:RSP_1633 hypothetical protein; hypothetical protein 389116 4899106 Rsph17029_3330 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045198.1 387632 D 349101 CDS YP_001045199.1 126464086 4899107 389123..389440 1 NC_009050.1 KEGG: rsp:RSP_1632 hypothetical protein; hypothetical protein 389440 4899107 Rsph17029_3331 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045199.1 389123 D 349101 CDS YP_001045200.1 126464087 4898878 389444..389782 1 NC_009050.1 KEGG: rsp:RSP_1631 hypothetical protein; hypothetical protein 389782 4898878 Rsph17029_3332 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045200.1 389444 D 349101 CDS YP_001045201.1 126464088 4898879 389779..390147 1 NC_009050.1 hypothetical protein 390147 4898879 Rsph17029_3333 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045201.1 389779 D 349101 CDS YP_001045202.1 126464089 4898880 390150..390602 1 NC_009050.1 hypothetical protein 390602 4898880 Rsph17029_3334 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045202.1 390150 D 349101 CDS YP_001045203.1 126464090 4899171 390606..390959 1 NC_009050.1 hypothetical protein 390959 4899171 Rsph17029_3335 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045203.1 390606 D 349101 CDS YP_001045204.1 126464091 4899172 391026..391826 1 NC_009050.1 KEGG: rsp:RSP_2050 hypothetical protein; hypothetical protein 391826 4899172 Rsph17029_3336 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045204.1 391026 D 349101 CDS YP_001045205.1 126464092 4899173 391839..392336 1 NC_009050.1 KEGG: rsp:RSP_3761 hypothetical protein; hypothetical protein 392336 4899173 Rsph17029_3337 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045205.1 391839 D 349101 CDS YP_001045206.1 126464093 4898765 392481..392825 1 NC_009050.1 hypothetical protein 392825 4898765 Rsph17029_3338 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045206.1 392481 D 349101 CDS YP_001045207.1 126464094 4898766 392827..393303 1 NC_009050.1 PFAM: Collagen triple helix repeat; KEGG: rno:353303 procollagen, type XXIII, alpha 1; triple helix repeat-containing collagen 393303 4898766 Rsph17029_3339 Rhodobacter sphaeroides ATCC 17029 triple helix repeat-containing collagen YP_001045207.1 392827 D 349101 CDS YP_001045208.1 126464095 4898767 393296..395206 1 NC_009050.1 hypothetical protein 395206 4898767 Rsph17029_3340 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045208.1 393296 D 349101 CDS YP_001045209.1 126464096 4898787 395220..396110 1 NC_009050.1 hypothetical protein 396110 4898787 Rsph17029_3341 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045209.1 395220 D 349101 CDS YP_001045210.1 126464097 4898788 complement(396172..396567) 1 NC_009050.1 PFAM: protein of unknown function UPF0150; KEGG: rsp:RSP_2748 possible transcriptional regulator, CopG family; hypothetical protein 396567 4898788 Rsph17029_3342 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045210.1 396172 R 349101 CDS YP_001045211.1 126464098 4898789 complement(396619..396807) 1 NC_009050.1 PFAM: YcfA family protein; KEGG: mmr:Mmar10_2094 YcfA family protein; hypothetical protein 396807 4898789 Rsph17029_3343 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045211.1 396619 R 349101 CDS YP_001045212.1 126464099 4898406 complement(397065..398147) 1 NC_009050.1 PFAM: phage integrase family protein; KEGG: rsp:RSP_3623 putative integrase; phage integrase family protein 398147 4898406 Rsph17029_3344 Rhodobacter sphaeroides ATCC 17029 phage integrase family protein YP_001045212.1 397065 R 349101 CDS YP_001045213.1 126464100 4898407 complement(398702..400513) 1 NC_009050.1 PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_2079 hypothetical protein; nuclease 400513 4898407 Rsph17029_3345 Rhodobacter sphaeroides ATCC 17029 nuclease YP_001045213.1 398702 R 349101 CDS YP_001045214.1 126464101 4898408 complement(400638..401033) 1 NC_009050.1 KEGG: rsp:RSP_2078 hypothetical protein; hypothetical protein 401033 4898408 Rsph17029_3346 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045214.1 400638 R 349101 CDS YP_001045215.1 126464102 4898382 complement(401033..401365) 1 NC_009050.1 KEGG: rsp:RSP_1658 hypothetical protein; hypothetical protein 401365 4898382 Rsph17029_3347 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045215.1 401033 R 349101 CDS YP_001045216.1 126464103 4898383 complement(401362..401559) 1 NC_009050.1 KEGG: rsp:RSP_6187 hypothetical protein; hypothetical protein 401559 4898383 Rsph17029_3348 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045216.1 401362 R 349101 CDS YP_001045217.1 126464104 4898433 complement(401898..402245) 1 NC_009050.1 PFAM: helix-turn-helix domain protein; KEGG: hch:HCH_06281 predicted transcriptional regulator; XRE family transcriptional regulator 402245 4898433 Rsph17029_3349 Rhodobacter sphaeroides ATCC 17029 XRE family transcriptional regulator YP_001045217.1 401898 R 349101 CDS YP_001045218.1 126464105 4898434 402657..402914 1 NC_009050.1 KEGG: rsp:RSP_6035 hypothetical protein; hypothetical protein 402914 4898434 Rsph17029_3350 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045218.1 402657 D 349101 CDS YP_001045219.1 126464106 4898435 403072..403707 1 NC_009050.1 KEGG: rsp:RSP_3611 hypothetical protein; hypothetical protein 403707 4898435 Rsph17029_3351 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045219.1 403072 D 349101 CDS YP_001045220.1 126464107 4898342 403741..404403 1 NC_009050.1 KEGG: rsp:RSP_3612 hypothetical protein; hypothetical protein 404403 4898342 Rsph17029_3352 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045220.1 403741 D 349101 CDS YP_001045221.1 126464108 4898343 404602..405180 1 NC_009050.1 KEGG: rsp:RSP_1654 hypothetical protein; hypothetical protein 405180 4898343 Rsph17029_3353 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045221.1 404602 D 349101 CDS YP_001045222.1 126464109 4898344 405177..405839 1 NC_009050.1 KEGG: rsp:RSP_6033 hypothetical protein; hypothetical protein 405839 4898344 Rsph17029_3354 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045222.1 405177 D 349101 CDS YP_001045223.1 126464110 4898451 405931..406647 1 NC_009050.1 KEGG: rsp:RSP_3779 hypothetical protein; hypothetical protein 406647 4898451 Rsph17029_3355 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045223.1 405931 D 349101 CDS YP_001045224.1 126464111 4898452 406845..407432 1 NC_009050.1 KEGG: rsp:RSP_3780 hypothetical protein; hypothetical protein 407432 4898452 Rsph17029_3356 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045224.1 406845 D 349101 CDS YP_001045225.1 126464112 4898453 407432..409594 1 NC_009050.1 PFAM: phage terminase GpA; KEGG: rsp:RSP_3781 putative phage terminase large subunit; phage terminase GpA 409594 4898453 Rsph17029_3357 Rhodobacter sphaeroides ATCC 17029 phage terminase GpA YP_001045225.1 407432 D 349101 CDS YP_001045226.1 126464113 4898940 409591..409800 1 NC_009050.1 KEGG: rsp:RSP_3782 hypothetical protein; hypothetical protein 409800 4898940 Rsph17029_3358 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045226.1 409591 D 349101 CDS YP_001045227.1 126464114 4898941 409800..411290 1 NC_009050.1 TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein, lambda; KEGG: rsp:RSP_3783 putative bacteriophage-related protein, phage portal protein, lambda family; lambda family phage portal protein 411290 4898941 Rsph17029_3359 Rhodobacter sphaeroides ATCC 17029 lambda family phage portal protein YP_001045227.1 409800 D 349101 CDS YP_001045228.1 126464115 4898942 411287..412642 1 NC_009050.1 PFAM: peptidase S49; KEGG: rsp:RSP_3627 periplasmic serine protease; peptidase S49 412642 4898942 Rsph17029_3360 Rhodobacter sphaeroides ATCC 17029 peptidase S49 YP_001045228.1 411287 D 349101 CDS YP_001045229.1 126464116 4898236 412775..413164 1 NC_009050.1 KEGG: rsp:RSP_6201 hypothetical protein; hypothetical protein 413164 4898236 Rsph17029_3361 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045229.1 412775 D 349101 CDS YP_001045230.1 126464117 4898237 413245..414267 1 NC_009050.1 KEGG: rsp:RSP_3785 putative bacteriophage-related protein; bacteriophage-like protein 414267 4898237 Rsph17029_3362 Rhodobacter sphaeroides ATCC 17029 bacteriophage-like protein YP_001045230.1 413245 D 349101 CDS YP_001045231.1 126464118 4898238 414278..414604 1 NC_009050.1 KEGG: rsp:RSP_3786 hypothetical protein; hypothetical protein 414604 4898238 Rsph17029_3363 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045231.1 414278 D 349101 CDS YP_001045232.1 126464119 4898163 414601..415023 1 NC_009050.1 KEGG: rsp:RSP_6200 hypothetical protein; hypothetical protein 415023 4898163 Rsph17029_3364 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045232.1 414601 D 349101 CDS YP_001045233.1 126464120 4898164 415134..415604 1 NC_009050.1 KEGG: rsp:RSP_3787 hypothetical protein; hypothetical protein 415604 4898164 Rsph17029_3365 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045233.1 415134 D 349101 CDS YP_001045234.1 126464121 4898165 415706..416146 1 NC_009050.1 KEGG: rsp:RSP_3788 hypothetical protein; hypothetical protein 416146 4898165 Rsph17029_3366 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045234.1 415706 D 349101 CDS YP_001045235.1 126464122 4898623 416209..416571 1 NC_009050.1 KEGG: sit:TM1040_1660 hypothetical protein; hypothetical protein 416571 4898623 Rsph17029_3367 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045235.1 416209 D 349101 CDS YP_001045236.1 126464123 4898624 416620..421794 1 NC_009050.1 KEGG: rsp:RSP_3791 hypothetical protein; hypothetical protein 421794 4898624 Rsph17029_3368 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045236.1 416620 D 349101 CDS YP_001045237.1 126464124 4899035 421794..422684 1 NC_009050.1 KEGG: rsp:RSP_2058 hypothetical protein; hypothetical protein 422684 4899035 Rsph17029_3369 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045237.1 421794 D 349101 CDS YP_001045238.1 126464125 4899036 422700..424184 1 NC_009050.1 KEGG: rsp:RSP_1633 hypothetical protein; hypothetical protein 424184 4899036 Rsph17029_3370 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045238.1 422700 D 349101 CDS YP_001045239.1 126464126 4899037 424191..424508 1 NC_009050.1 KEGG: rsp:RSP_1632 hypothetical protein; hypothetical protein 424508 4899037 Rsph17029_3371 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045239.1 424191 D 349101 CDS YP_001045240.1 126464127 4898836 424512..424847 1 NC_009050.1 KEGG: rsp:RSP_1631 hypothetical protein; hypothetical protein 424847 4898836 Rsph17029_3372 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045240.1 424512 D 349101 CDS YP_001045241.1 126464128 4898837 425080..425397 1 NC_009050.1 KEGG: rsp:RSP_3767 hypothetical protein; hypothetical protein 425397 4898837 Rsph17029_3373 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045241.1 425080 D 349101 CDS YP_001045242.1 126464129 4898838 425596..425973 1 NC_009050.1 hypothetical protein 425973 4898838 Rsph17029_3374 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045242.1 425596 D 349101 CDS YP_001045243.1 126464130 4898535 complement(426231..426728) 1 NC_009050.1 hypothetical protein 426728 4898535 Rsph17029_3375 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045243.1 426231 R 349101 CDS YP_001045244.1 126464131 4898536 427065..427871 1 NC_009050.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rsp:RSP_2052 N6 adenine-specific DNA methyltransferase, D12 class; D12 class N6 adenine-specific DNA methyltransferase 427871 4898536 Rsph17029_3376 Rhodobacter sphaeroides ATCC 17029 D12 class N6 adenine-specific DNA methyltransferase YP_001045244.1 427065 D 349101 CDS YP_001045245.1 126464132 4898537 427926..428735 1 NC_009050.1 KEGG: rsp:RSP_3760 hypothetical protein; hypothetical protein 428735 4898537 Rsph17029_3377 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045245.1 427926 D 349101 CDS YP_001045246.1 126464133 4898547 428748..429230 1 NC_009050.1 KEGG: rsp:RSP_3761 hypothetical protein; hypothetical protein 429230 4898547 Rsph17029_3378 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045246.1 428748 D 349101 CDS YP_001045247.1 126464134 4898548 complement(429480..430289) 1 NC_009050.1 KEGG: aci:ACIAD2953 hypothetical protein; hypothetical protein 430289 4898548 Rsph17029_3379 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045247.1 429480 R 349101 CDS YP_001045248.1 126464135 4898549 complement(430292..433903) 1 NC_009050.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: nha:Nham_4464 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 433903 4898549 Rsph17029_3380 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001045248.1 430292 R 349101 CDS YP_001045249.1 126464136 4899174 complement(433904..434818) 1 NC_009050.1 KEGG: nha:Nham_4463 hypothetical protein; hypothetical protein 434818 4899174 Rsph17029_3381 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045249.1 433904 R 349101 CDS YP_001045250.1 126464137 4899175 435511..436452 1 NC_009050.1 KEGG: rru:Rru_A0512 hypothetical protein; hypothetical protein 436452 4899175 Rsph17029_3382 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045250.1 435511 D 349101 CDS YP_001045251.1 126464138 4899176 436452..439058 1 NC_009050.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rru:Rru_A0511 DEAD/DEAH box helicase; DEAD/DEAH box helicase 439058 4899176 Rsph17029_3383 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001045251.1 436452 D 349101 CDS YP_001045252.1 126464139 4898490 439059..439796 1 NC_009050.1 KEGG: neu:NE2513 putative (AF322013) ID483 [Bradyrhizobium japonicum]; hypothetical protein 439796 4898490 Rsph17029_3384 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045252.1 439059 D 349101 CDS YP_001045253.1 126464140 4898491 440034..440468 1 NC_009050.1 PFAM: DNA mismatch endonuclease vsr; KEGG: nha:Nham_2517 DNA mismatch endonuclease vsr; DNA mismatch endonuclease vsr 440468 4898491 Rsph17029_3385 Rhodobacter sphaeroides ATCC 17029 DNA mismatch endonuclease vsr YP_001045253.1 440034 D 349101 CDS YP_001045254.1 126464141 4898492 complement(440422..441657) 1 NC_009050.1 KEGG: dvu:DVU2841 type II restriction endonuclease, putative; type II restriction endonuclease 441657 4898492 Rsph17029_3386 Rhodobacter sphaeroides ATCC 17029 type II restriction endonuclease YP_001045254.1 440422 R 349101 CDS YP_001045255.1 126464142 4898592 complement(441667..442920) 1 NC_009050.1 KEGG: lpf:lpl0145 DNA (cytosine-5-)-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 442920 4898592 Rsph17029_3387 Rhodobacter sphaeroides ATCC 17029 DNA-cytosine methyltransferase YP_001045255.1 441667 R 349101 CDS YP_001045256.1 126464143 4898246 complement(443458..444018) 1 NC_009050.1 KEGG: rsp:RSP_3646 DNA topology modulation kinase FlaR, putative; DNA topology modulation kinase FlaR 444018 4898246 Rsph17029_3388 Rhodobacter sphaeroides ATCC 17029 DNA topology modulation kinase FlaR YP_001045256.1 443458 R 349101 CDS YP_001045257.1 126464144 4898738 complement(445033..445926) 1 NC_009050.1 KEGG: rsp:RSP_3608 hypothetical protein; hypothetical protein 445926 4898738 Rsph17029_3389 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045257.1 445033 R 349101 CDS YP_001045258.1 126464145 4898395 complement(447128..448033) 1 NC_009050.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 448033 4898395 Rsph17029_3393 Rhodobacter sphaeroides ATCC 17029 5-dehydro-4-deoxyglucarate dehydratase YP_001045258.1 447128 R 349101 CDS YP_001045259.1 126464146 4898740 complement(448152..449678) 1 NC_009050.1 PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_3656 NAD-dependent aldehyde dehydrogenase; aldehyde dehydrogenase 449678 4898740 Rsph17029_3394 Rhodobacter sphaeroides ATCC 17029 aldehyde dehydrogenase YP_001045259.1 448152 R 349101 CDS YP_001045260.1 126464147 4898321 complement(449720..450376) 1 NC_009050.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3657 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase; dimethylmenaquinone methyltransferase 450376 4898321 Rsph17029_3395 Rhodobacter sphaeroides ATCC 17029 dimethylmenaquinone methyltransferase YP_001045260.1 449720 R 349101 CDS YP_001045261.1 126464148 4898322 complement(450373..451173) 1 NC_009050.1 PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_3658 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HpcH/HpaI aldolase 451173 4898322 Rsph17029_3396 Rhodobacter sphaeroides ATCC 17029 HpcH/HpaI aldolase YP_001045261.1 450373 R 349101 CDS YP_001045262.1 126464149 4898323 complement(451170..452012) 1 NC_009050.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3659 predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 452012 4898323 Rsph17029_3397 Rhodobacter sphaeroides ATCC 17029 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001045262.1 451170 R 349101 CDS YP_001045263.1 126464150 4898289 complement(452064..453059) 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_3661 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter, DctP subunit 453059 4898289 Rsph17029_3398 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter, DctP subunit YP_001045263.1 452064 R 349101 CDS YP_001045264.1 126464151 4898290 complement(453127..454407) 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_3662 TRAP-T family transporter, large (12TMs) inner membrane subunit; TRAP dicarboxylate transporter, DctM subunit 454407 4898290 Rsph17029_3399 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter, DctM subunit YP_001045264.1 453127 R 349101 CDS YP_001045265.1 126464152 4898291 complement(454404..454958) 1 NC_009050.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_3663 TRAP-T family transporter, small (4TMs) inner membrane subunit; tripartite ATP-independent periplasmic transporter DctQ 454958 4898291 Rsph17029_3400 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001045265.1 454404 R 349101 CDS YP_001045266.1 126464153 4898253 complement(455163..455864) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3664 transcriptional regulator, GntR family; GntR family transcriptional regulator 455864 4898253 Rsph17029_3401 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045266.1 455163 R 349101 CDS YP_001045267.1 126464154 4898254 complement(456803..457519) 1 NC_009050.1 PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: rsp:RSP_3665 transcriptional regulator, LuxR family; response regulator receiver protein 457519 4898254 Rsph17029_3402 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001045267.1 456803 R 349101 CDS YP_001045268.1 126464155 4898255 457776..468680 1 NC_009050.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rsp:RSP_3667 transcriptional regulator, AraC family with parallel beta-helix repeat; hypothetical protein 468680 4898255 Rsph17029_3403 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045268.1 457776 D 349101 CDS YP_001045269.1 126464156 4898816 468685..472212 1 NC_009050.1 KEGG: rsp:RSP_3669 hypothetical protein; hypothetical protein 472212 4898816 Rsph17029_3404 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045269.1 468685 D 349101 CDS YP_001045270.1 126464157 4898817 complement(472532..473530) 1 NC_009050.1 PFAM: oxidoreductase domain protein; KEGG: rsp:RSP_3670 putative oxidoreductase myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein 473530 4898817 Rsph17029_3405 Rhodobacter sphaeroides ATCC 17029 oxidoreductase domain-containing protein YP_001045270.1 472532 R 349101 CDS YP_001045271.1 126464158 4898818 complement(473530..474417) 1 NC_009050.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_3671 putative D-tagatose 3-epimerase; xylose isomerase domain-containing protein 474417 4898818 Rsph17029_3406 Rhodobacter sphaeroides ATCC 17029 xylose isomerase domain-containing protein YP_001045271.1 473530 R 349101 CDS YP_001045272.1 126464159 4898959 complement(474471..475304) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3672 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 475304 4898959 Rsph17029_3407 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045272.1 474471 R 349101 CDS YP_001045273.1 126464160 4898960 complement(475304..476230) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3673 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 476230 4898960 Rsph17029_3408 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045273.1 475304 R 349101 CDS YP_001045274.1 126464161 4898961 complement(476359..477573) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3674 ABC sugar transporter, periplasmic binding protein; extracellular solute-binding protein 477573 4898961 Rsph17029_3409 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045274.1 476359 R 349101 CDS YP_001045275.1 126464162 4898287 complement(477621..478538) 1 NC_009050.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rsp:RSP_3675 esterase/lipase/thioesterase; alpha/beta hydrolase domain-containing protein 478538 4898287 Rsph17029_3410 Rhodobacter sphaeroides ATCC 17029 alpha/beta hydrolase domain-containing protein YP_001045275.1 477621 R 349101 CDS YP_001045276.1 126464163 4898288 complement(478535..479260) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3676 transcriptional regulator, GntR family; GntR family transcriptional regulator 479260 4898288 Rsph17029_3411 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045276.1 478535 R 349101 CDS YP_001045277.1 126464164 4898472 479387..480466 1 NC_009050.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3677 ABC sugar transporter, ATPase subunit; ABC transporter 480466 4898472 Rsph17029_3412 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045277.1 479387 D 349101 CDS YP_001045278.1 126464165 4898473 481178..482215 1 NC_009050.1 PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rsp:RSP_3678 siderophore-interacting protein; siderophore-interacting protein 482215 4898473 Rsph17029_3413 Rhodobacter sphaeroides ATCC 17029 siderophore-interacting protein YP_001045278.1 481178 D 349101 CDS YP_001045279.1 126464166 4898474 complement(482529..483695) 1 NC_009050.1 KEGG: rsp:RSP_3679 hypothetical protein; hypothetical protein 483695 4898474 Rsph17029_3414 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045279.1 482529 R 349101 CDS YP_001045280.1 126464167 4898845 complement(483934..484557) 1 NC_009050.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3680 transcriptional regulator, TetR family; TetR family transcriptional regulator 484557 4898845 Rsph17029_3415 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001045280.1 483934 R 349101 CDS YP_001045281.1 126464168 4898846 484696..486732 1 NC_009050.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3681 putative NADH-dependent oxidase; NADH:flavin oxidoreductase 486732 4898846 Rsph17029_3416 Rhodobacter sphaeroides ATCC 17029 NADH:flavin oxidoreductase YP_001045281.1 484696 D 349101 CDS YP_001045282.1 126464169 4898847 487159..488145 1 NC_009050.1 KEGG: rsp:RSP_3683 possible FemAB family protein; putative FemAB family protein 488145 4898847 Rsph17029_3417 Rhodobacter sphaeroides ATCC 17029 putative FemAB family protein YP_001045282.1 487159 D 349101 CDS YP_001045283.1 126464170 4899102 488720..489400 1 NC_009050.1 PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: rsp:RSP_3684 transcriptional regulator, LuxR family; response regulator receiver protein 489400 4899102 Rsph17029_3418 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001045283.1 488720 D 349101 CDS YP_001045284.1 126464171 4899103 489494..489940 1 NC_009050.1 KEGG: rsp:RSP_6198 hypothetical protein; hypothetical protein 489940 4899103 Rsph17029_3419 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045284.1 489494 D 349101 CDS YP_001045285.1 126464172 4899104 490233..490604 1 NC_009050.1 KEGG: rsp:RSP_6199 hypothetical protein; hypothetical protein 490604 4899104 Rsph17029_3420 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045285.1 490233 D 349101 CDS YP_001045286.1 126464173 4898284 490993..492033 1 NC_009050.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3686 transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator 492033 4898284 Rsph17029_3421 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001045286.1 490993 D 349101 CDS YP_001045287.1 126464174 4898285 492036..492968 1 NC_009050.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3687 ABC sugar transporter, periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 492968 4898285 Rsph17029_3422 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001045287.1 492036 D 349101 CDS YP_001045288.1 126464175 4898286 492965..493750 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3688 ABC sugar transporter, ATPase subunit; ABC transporter 493750 4898286 Rsph17029_3423 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045288.1 492965 D 349101 CDS YP_001045289.1 126464176 4898872 493750..494754 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3689 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 494754 4898872 Rsph17029_3424 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045289.1 493750 D 349101 CDS YP_001045290.1 126464177 4898873 494751..495815 1 NC_009050.1 PFAM: aryldialkylphosphatase; KEGG: rsp:RSP_3690 resiniferatoxin-binding, phosphotriesterase-related protein; aryldialkylphosphatase 495815 4898873 Rsph17029_3425 Rhodobacter sphaeroides ATCC 17029 aryldialkylphosphatase YP_001045290.1 494751 D 349101 CDS YP_001045291.1 126464178 4898874 495838..496602 1 NC_009050.1 PFAM: protein of unknown function DUF1355; KEGG: rsp:RSP_3691 putative cytoplasmic protein; hypothetical protein 496602 4898874 Rsph17029_3426 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045291.1 495838 D 349101 CDS YP_001045292.1 126464179 4898379 complement(496732..497610) 1 NC_009050.1 PFAM: PfkB domain protein; KEGG: rsp:RSP_3692 carbohydrate kinase, PfkB/ribokinase; ribokinase-like domain-containing protein 497610 4898379 Rsph17029_3427 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001045292.1 496732 R 349101 CDS YP_001045293.1 126464180 4898380 497643..498485 1 NC_009050.1 PFAM: photosystem I assembly BtpA; KEGG: rsp:RSP_3693 BtpA protein; photosystem I assembly BtpA 498485 4898380 Rsph17029_3428 Rhodobacter sphaeroides ATCC 17029 photosystem I assembly BtpA YP_001045293.1 497643 D 349101 CDS YP_001045294.1 126464181 4898381 498478..499143 1 NC_009050.1 PFAM: TENA/THI-4 domain protein; KEGG: rsp:RSP_3694 putative transcription activator; TenA family transcription regulator 499143 4898381 Rsph17029_3429 Rhodobacter sphaeroides ATCC 17029 TenA family transcription regulator YP_001045294.1 498478 D 349101 CDS YP_001045295.1 126464182 4899081 complement(499113..500207) 1 NC_009050.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rsp:RSP_3695 putative acetylornithine deacetylase (acetylornithinase); peptidase M20 500207 4899081 Rsph17029_3430 Rhodobacter sphaeroides ATCC 17029 peptidase M20 YP_001045295.1 499113 R 349101 CDS YP_001045296.1 126464183 4899082 500577..501692 1 NC_009050.1 KEGG: rsp:RSP_3696 ABC sulfate/thiosulfate transporter, ATPase subunit CysA; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 501692 4899082 Rsph17029_3431 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter ATPase YP_001045296.1 500577 D 349101 CDS YP_001045297.1 126464184 4898400 501689..502681 1 NC_009050.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3697 ABC sulfate/thiosulfate transporter, periplasmic binding protein CysP; sulfate ABC transporter, periplasmic sulfate-binding protein 502681 4898400 Rsph17029_3432 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001045297.1 501689 D 349101 CDS YP_001045298.1 126464185 4898401 502678..503535 1 NC_009050.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3698 ABC sulfate/thiosulfate transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit CysT 503535 4898401 Rsph17029_3433 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter, inner membrane subunit CysT YP_001045298.1 502678 D 349101 CDS YP_001045299.1 126464186 4898402 503532..504371 1 NC_009050.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3699 ABC sulfate/thiosulfate transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit CysW 504371 4898402 Rsph17029_3434 Rhodobacter sphaeroides ATCC 17029 sulfate ABC transporter, inner membrane subunit CysW YP_001045299.1 503532 D 349101 CDS YP_001045300.1 126464187 4898529 complement(504461..505525) 1 NC_009050.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3700 transcriptional regulator, LacI family; regulatory protein, LacI 505525 4898529 Rsph17029_3435 Rhodobacter sphaeroides ATCC 17029 regulatory protein, LacI YP_001045300.1 504461 R 349101 CDS YP_001045301.1 126464188 4898530 505695..506744 1 NC_009050.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3701 ABC sugar transporter, periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 506744 4898530 Rsph17029_3436 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001045301.1 505695 D 349101 CDS YP_001045302.1 126464189 4898531 506803..507600 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3702 ABC sugar transporter, ATPase subunit; ABC transporter 507600 4898531 Rsph17029_3437 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045302.1 506803 D 349101 CDS YP_001045303.1 126464190 4898695 507603..508841 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3703 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 508841 4898695 Rsph17029_3438 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045303.1 507603 D 349101 CDS YP_001045304.1 126464191 4898696 508854..509582 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_3704 ribitol 2-dehydrogenase; short-chain dehydrogenase/reductase SDR 509582 4898696 Rsph17029_3439 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045304.1 508854 D 349101 CDS YP_001045305.1 126464192 4898697 509656..511290 1 NC_009050.1 TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_3705 D-ribulokinase; FGGY-family pentulose kinase 511290 4898697 Rsph17029_3440 Rhodobacter sphaeroides ATCC 17029 FGGY-family pentulose kinase YP_001045305.1 509656 D 349101 CDS YP_001045306.1 126464193 4898127 complement(511390..511917) 1 NC_009050.1 KEGG: rsp:RSP_3706 hypothetical protein; hypothetical protein 511917 4898127 Rsph17029_3441 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045306.1 511390 R 349101 CDS YP_001045307.1 126464194 4898128 512224..513915 1 NC_009050.1 PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3707 putative NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 513915 4898128 Rsph17029_3442 Rhodobacter sphaeroides ATCC 17029 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001045307.1 512224 D 349101 CDS YP_001045308.1 126464195 4898129 complement(513950..515611) 1 NC_009050.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3708 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 515611 4898129 Rsph17029_3443 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001045308.1 513950 R 349101 CDS YP_001045309.1 126464196 4898921 complement(515873..516319) 1 NC_009050.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit G 516319 4898921 Rsph17029_3444 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit G YP_001045309.1 515873 R 349101 CDS YP_001045310.1 126464197 4898922 complement(516316..516597) 1 NC_009050.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F 516597 4898922 Rsph17029_3445 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit F YP_001045310.1 516316 R 349101 CDS YP_001045311.1 126464198 4898923 complement(516594..517082) 1 NC_009050.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit E 517082 4898923 Rsph17029_3446 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit E YP_001045311.1 516594 R 349101 CDS YP_001045312.1 126464199 4898478 complement(517079..518701) 1 NC_009050.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 518701 4898478 Rsph17029_3447 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit D YP_001045312.1 517079 R 349101 CDS YP_001045313.1 126464200 4898479 complement(518698..519042) 1 NC_009050.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 519042 4898479 Rsph17029_3448 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit C YP_001045313.1 518698 R 349101 CDS YP_001045314.1 126464201 4898480 complement(519042..521936) 1 NC_009050.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 521936 4898480 Rsph17029_3449 Rhodobacter sphaeroides ATCC 17029 putative monovalent cation/H+ antiporter subunit A YP_001045314.1 519042 R 349101 CDS YP_001045315.1 126464202 4898834 522256..523311 1 NC_009050.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 523311 4898834 Rsph17029_3450 Rhodobacter sphaeroides ATCC 17029 selenophosphate synthetase YP_001045315.1 522256 D 349101 CDS YP_001045316.1 126464203 4898835 complement(523383..523820) 1 NC_009050.1 KEGG: rsp:RSP_3717 hypothetical protein; hypothetical protein 523820 4898835 Rsph17029_3451 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045316.1 523383 R 349101 CDS YP_001045317.1 126464204 4898292 complement(523832..525274) 1 NC_009050.1 KEGG: rsp:RSP_3718 hypothetical protein; hypothetical protein 525274 4898292 Rsph17029_3452 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045317.1 523832 R 349101 CDS YP_001045318.1 126464205 4898293 525608..527122 1 NC_009050.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rsp:RSP_3719 polysaccharide export transporter, PST family; polysaccharide biosynthesis protein 527122 4898293 Rsph17029_3453 Rhodobacter sphaeroides ATCC 17029 polysaccharide biosynthesis protein YP_001045318.1 525608 D 349101 CDS YP_001045319.1 126464206 4898294 527134..528087 1 NC_009050.1 KEGG: rsp:RSP_3720 hypothetical protein; hypothetical protein 528087 4898294 Rsph17029_3454 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045319.1 527134 D 349101 CDS YP_001045320.1 126464207 4898318 528524..529675 1 NC_009050.1 PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_3721 hypothetical protein; group 1 glycosyl transferase 529675 4898318 Rsph17029_3455 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001045320.1 528524 D 349101 CDS YP_001045321.1 126464208 4898319 complement(529842..530792) 1 NC_009050.1 PFAM: phosphoribosyltransferase; KEGG: rsp:RSP_3722 hypothetical protein; phosphoribosyltransferase 530792 4898319 Rsph17029_3456 Rhodobacter sphaeroides ATCC 17029 phosphoribosyltransferase YP_001045321.1 529842 R 349101 CDS YP_001045322.1 126464209 4898320 complement(530889..532043) 1 NC_009050.1 PFAM: acyltransferase 3; KEGG: rsp:RSP_3723 hypothetical protein; acyltransferase 3 532043 4898320 Rsph17029_3457 Rhodobacter sphaeroides ATCC 17029 acyltransferase 3 YP_001045322.1 530889 R 349101 CDS YP_001045323.1 126464210 4898423 complement(532220..533296) 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_3724 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase 533296 4898423 Rsph17029_3458 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase YP_001045323.1 532220 R 349101 CDS YP_001045324.1 126464211 4898424 complement(533576..535282) 1 NC_009050.1 KEGG: rsp:RSP_3725 hypothetical protein; hypothetical protein 535282 4898424 Rsph17029_3459 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045324.1 533576 R 349101 CDS YP_001045325.1 126464212 4898425 complement(535279..537258) 1 NC_009050.1 KEGG: rsp:RSP_3727 hypothetical protein; hypothetical protein 537258 4898425 Rsph17029_3460 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045325.1 535279 R 349101 CDS YP_001045326.1 126464213 4898713 complement(537626..538216) 1 NC_009050.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rsp:RSP_3728 putative acyl carrier protein phosphodiesterase; ACP phosphodiesterase 538216 4898713 Rsph17029_3461 Rhodobacter sphaeroides ATCC 17029 ACP phosphodiesterase YP_001045326.1 537626 R 349101 CDS YP_001045327.1 126464214 4898714 538692..539084 1 NC_009050.1 KEGG: rsp:RSP_3729 hypothetical protein; hypothetical protein 539084 4898714 Rsph17029_3462 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045327.1 538692 D 349101 CDS YP_001045328.1 126464215 4898715 539277..540158 1 NC_009050.1 YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 540158 4898715 Rsph17029_3463 Rhodobacter sphaeroides ATCC 17029 putative glutathione S-transferase YghU YP_001045328.1 539277 D 349101 CDS YP_001045329.1 126464216 4898118 complement(540200..540964) 1 NC_009050.1 PFAM: regulatory protein, DeoR; KEGG: rsp:RSP_3731 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 540964 4898118 Rsph17029_3464 Rhodobacter sphaeroides ATCC 17029 DeoR family transcriptional regulator YP_001045329.1 540200 R 349101 CDS YP_001045330.1 126464217 4898119 541083..542129 1 NC_009050.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3732 ABC sugar transporter, periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 542129 4898119 Rsph17029_3465 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein/LacI transcriptional regulator YP_001045330.1 541083 D 349101 CDS YP_001045331.1 126464218 4898120 542211..543704 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3733 ABC sugar transporter, fused ATPase domains; ABC transporter 543704 4898120 Rsph17029_3466 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045331.1 542211 D 349101 CDS YP_001045332.1 126464219 4898097 543713..544690 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3734 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 544690 4898097 Rsph17029_3467 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045332.1 543713 D 349101 CDS YP_001045333.1 126464220 4898098 544703..545713 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3735 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 545713 4898098 Rsph17029_3468 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045333.1 544703 D 349101 CDS YP_001045334.1 126464221 4898099 545710..546804 1 NC_009050.1 KEGG: rsp:RSP_3736 hypothetical protein; hypothetical protein 546804 4898099 Rsph17029_3469 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045334.1 545710 D 349101 CDS YP_001045335.1 126464222 4898345 546808..547755 1 NC_009050.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: rsp:RSP_3738 carbohydrate kinase, PfkB family; ribokinase 547755 4898345 Rsph17029_3470 Rhodobacter sphaeroides ATCC 17029 ribokinase YP_001045335.1 546808 D 349101 CDS YP_001045336.1 126464223 4898346 547752..548726 1 NC_009050.1 KEGG: rsp:RSP_3739 deoxyribose phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 548726 4898346 Rsph17029_3471 Rhodobacter sphaeroides ATCC 17029 deoxyribose-phosphate aldolase YP_001045336.1 547752 D 349101 CDS YP_001045337.1 126464224 4898854 548738..551113 1 NC_009050.1 PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_3740 aldehyde dehydrogenase; betaine-aldehyde dehydrogenase 551113 4898854 Rsph17029_3472 Rhodobacter sphaeroides ATCC 17029 betaine-aldehyde dehydrogenase YP_001045337.1 548738 D 349101 CDS YP_001045338.1 126464225 4898855 complement(551290..552081) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_3742 ABC amino acid transporter, periplasmic binding protein; extracellular solute-binding protein 552081 4898855 Rsph17029_3473 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045338.1 551290 R 349101 CDS YP_001045339.1 126464226 4898856 complement(552109..553071) 1 NC_009050.1 TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rsp:RSP_3743 putative agmatinase; putative agmatinase 553071 4898856 Rsph17029_3474 Rhodobacter sphaeroides ATCC 17029 putative agmatinase YP_001045339.1 552109 R 349101 CDS YP_001045340.1 126464227 4898776 complement(553075..553734) 1 NC_009050.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3744 ABC amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 553734 4898776 Rsph17029_3475 Rhodobacter sphaeroides ATCC 17029 polar amino acid ABC transporter inner membrane subunit YP_001045340.1 553075 R 349101 CDS YP_001045341.1 126464228 4898777 complement(553731..554531) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3745 ABC amino acid transporter, ATPase subunit; ABC transporter 554531 4898777 Rsph17029_3476 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045341.1 553731 R 349101 CDS YP_001045342.1 126464229 4898778 complement(554528..555142) 1 NC_009050.1 KEGG: rsp:RSP_3746 hypothetical protein; hypothetical protein 555142 4898778 Rsph17029_3477 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045342.1 554528 R 349101 CDS YP_001045343.1 126464230 4898690 555439..556617 1 NC_009050.1 PFAM: peptidase M24; KEGG: rsp:RSP_3747 putative dipeptidase; peptidase M24 556617 4898690 Rsph17029_3478 Rhodobacter sphaeroides ATCC 17029 peptidase M24 YP_001045343.1 555439 D 349101 CDS YP_001045344.1 126464231 4898396 complement(557290..558084) 1 NC_009050.1 PFAM: protein of unknown function DUF849; KEGG: rsp:RSP_3804 hypothetical protein; hypothetical protein 558084 4898396 Rsph17029_3479 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045344.1 557290 R 349101 CDS YP_001045345.1 126464232 4898692 complement(558125..559453) 1 NC_009050.1 PFAM: aminotransferase class-III; KEGG: rsp:RSP_3803 hypothetical protein; hypothetical protein 559453 4898692 Rsph17029_3480 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045345.1 558125 R 349101 CDS YP_001045346.1 126464233 4898520 complement(559458..559883) 1 NC_009050.1 PFAM: UspA domain protein; KEGG: rsp:RSP_3802 hypothetical protein; UspA domain-containing protein 559883 4898520 Rsph17029_3481 Rhodobacter sphaeroides ATCC 17029 UspA domain-containing protein YP_001045346.1 559458 R 349101 CDS YP_001045347.1 126464234 4898521 complement(559846..562458) 1 NC_009050.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1412 TRAP-T family transporter with fused DctQ/DctM subunits; TRAP transporter, 4TM/12TM fusion protein 562458 4898521 Rsph17029_3482 Rhodobacter sphaeroides ATCC 17029 TRAP transporter, 4TM/12TM fusion protein YP_001045347.1 559846 R 349101 CDS YP_001045348.1 126464235 4898522 complement(562537..563511) 1 NC_009050.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rsp:RSP_1413 TRAP-T family transporter, periplasmic binding component; TRAP transporter solute receptor TAXI family protein 563511 4898522 Rsph17029_3483 Rhodobacter sphaeroides ATCC 17029 TRAP transporter solute receptor TAXI family protein YP_001045348.1 562537 R 349101 CDS YP_001045349.1 126464236 4898220 563659..564519 1 NC_009050.1 PFAM: sugar isomerase (SIS); KEGG: rsp:RSP_1414 hypothetical protein; RpiR family transcriptional regulator 564519 4898220 Rsph17029_3484 Rhodobacter sphaeroides ATCC 17029 RpiR family transcriptional regulator YP_001045349.1 563659 D 349101 CDS YP_001045350.1 126464237 4898221 564844..565746 1 NC_009050.1 PFAM: polysaccharide deacetylase; KEGG: rsp:RSP_1415 putative polysaccharide deacetylase; polysaccharide deacetylase 565746 4898221 Rsph17029_3485 Rhodobacter sphaeroides ATCC 17029 polysaccharide deacetylase YP_001045350.1 564844 D 349101 CDS YP_001045351.1 126464238 4898222 565768..566061 1 NC_009050.1 KEGG: rsp:RSP_1416 hypothetical protein; hypothetical protein 566061 4898222 Rsph17029_3486 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045351.1 565768 D 349101 CDS YP_001045352.1 126464239 4899049 566054..567001 1 NC_009050.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rsp:RSP_1417 hypothetical protein; cobalamin synthesis protein, P47K 567001 4899049 Rsph17029_3487 Rhodobacter sphaeroides ATCC 17029 cobalamin synthesis protein, P47K YP_001045352.1 566054 D 349101 CDS YP_001045353.1 126464240 4899050 complement(567209..568726) 1 NC_009050.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: rsp:RSP_1418 TRAP-T family transporter, large (12 TMs) inner membrane subunit; hypothetical protein 568726 4899050 Rsph17029_3488 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045353.1 567209 R 349101 CDS YP_001045354.1 126464241 4899051 complement(568727..569218) 1 NC_009050.1 KEGG: rsp:RSP_1419 TRAP-T family transporter, small (4 TMs) inner membrane subunit; TRAP-T family transporter small inner membrane subunit 569218 4899051 Rsph17029_3489 Rhodobacter sphaeroides ATCC 17029 TRAP-T family transporter small inner membrane subunit YP_001045354.1 568727 R 349101 CDS YP_001045355.1 126464242 4898693 complement(569215..570159) 1 NC_009050.1 PFAM: Uncharacterized protein UPF0065; KEGG: rsp:RSP_1420 TRAP-T family transporter, periplasmic binding protein; hypothetical protein 570159 4898693 Rsph17029_3490 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045355.1 569215 R 349101 CDS YP_001045356.1 126464243 4898694 complement(570398..570595) 1 NC_009050.1 KEGG: rsp:RSP_1421 hypothetical protein; hypothetical protein 570595 4898694 Rsph17029_3491 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045356.1 570398 R 349101 CDS YP_001045357.1 126464244 4898169 complement(571021..572106) 1 NC_009050.1 PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_1422 ParB-like nuclease; nuclease 572106 4898169 Rsph17029_3492 Rhodobacter sphaeroides ATCC 17029 nuclease YP_001045357.1 571021 R 349101 CDS YP_001045358.1 126464245 4898170 complement(572084..573490) 1 NC_009050.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rsp:RSP_1423 ParA family ATPase; cobyrinic acid a,c-diamide synthase 573490 4898170 Rsph17029_3493 Rhodobacter sphaeroides ATCC 17029 cobyrinic acid a,c-diamide synthase YP_001045358.1 572084 R 349101 CDS YP_001045359.1 126464246 4898171 574086..575399 1 NC_009050.1 KEGG: rsp:RSP_1425 plasmid replication initiation protein; plasmid replication initiation protein 575399 4898171 Rsph17029_3494 Rhodobacter sphaeroides ATCC 17029 plasmid replication initiation protein YP_001045359.1 574086 D 349101 CDS YP_001045360.1 126464247 4899092 complement(581669..582757) 1 NC_009050.1 KEGG: rsp:RSP_3806 hypothetical protein; hypothetical protein 582757 4899092 Rsph17029_3495 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045360.1 581669 R 349101 CDS YP_001045361.1 126464248 4898626 complement(582934..583941) 1 NC_009050.1 KEGG: rsp:RSP_3808 hypothetical protein; hypothetical protein 583941 4898626 Rsph17029_3496 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045361.1 582934 R 349101 CDS YP_001045362.1 126464249 4898627 complement(584216..584524) 1 NC_009050.1 PFAM: plasmid stabilization system; KEGG: rsp:RSP_3809 hypothetical protein; plasmid stabilization system protein 584524 4898627 Rsph17029_3497 Rhodobacter sphaeroides ATCC 17029 plasmid stabilization system protein YP_001045362.1 584216 R 349101 CDS YP_001045363.1 126464250 4898350 complement(584529..584783) 1 NC_009050.1 KEGG: rsp:RSP_3810 hypothetical protein; hypothetical protein 584783 4898350 Rsph17029_3498 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045363.1 584529 R 349101 CDS YP_001045364.1 126464251 4898351 complement(584866..585189) 1 NC_009050.1 KEGG: rsp:RSP_3811 hypothetical protein; hypothetical protein 585189 4898351 Rsph17029_3499 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045364.1 584866 R 349101 CDS YP_001045365.1 126464252 4898352 585260..585439 1 NC_009050.1 hypothetical protein 585439 4898352 Rsph17029_3500 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045365.1 585260 D 349101 CDS YP_001045366.1 126464253 4898124 585510..587081 1 NC_009050.1 PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: rsp:RSP_3812 recombinase; recombinase 587081 4898124 Rsph17029_3501 Rhodobacter sphaeroides ATCC 17029 recombinase YP_001045366.1 585510 D 349101 CDS YP_001045367.1 126464254 4898125 587081..587989 1 NC_009050.1 PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: rsp:RSP_3813 ParB-like nuclease; RepB plasmid partition 587989 4898125 Rsph17029_3502 Rhodobacter sphaeroides ATCC 17029 RepB plasmid partition YP_001045367.1 587081 D 349101 CDS YP_001045368.1 126464255 4898126 587986..588903 1 NC_009050.1 PFAM: RepB plasmid partition; SMART: ParB domain protein nuclease; KEGG: rsp:RSP_3814 hypothetical protein; RepB plasmid partition 588903 4898126 Rsph17029_3503 Rhodobacter sphaeroides ATCC 17029 RepB plasmid partition YP_001045368.1 587986 D 349101 CDS YP_001045369.1 126464256 4899168 complement(590256..590540) 1 NC_009050.1 KEGG: sil:SPOA0122 ISSpo9, transposase; hypothetical protein 590540 4899168 Rsph17029_3504 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045369.1 590256 R 349101 CDS YP_001045370.1 126464257 4898811 590707..590979 1 NC_009050.1 hypothetical protein 590979 4898811 Rsph17029_3506 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045370.1 590707 D 349101 CDS YP_001045371.1 126464258 4899170 590979..591326 1 NC_009050.1 hypothetical protein 591326 4899170 Rsph17029_3507 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045371.1 590979 D 349101 CDS YP_001045372.1 126464259 4899066 591525..591812 1 NC_009050.1 hypothetical protein 591812 4899066 Rsph17029_3508 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045372.1 591525 D 349101 CDS YP_001045373.1 126464260 4899067 complement(591994..592566) 1 NC_009050.1 KEGG: rsp:RSP_3313 possible phage integrase family protein; putative phage integrase family protein 592566 4899067 Rsph17029_3509 Rhodobacter sphaeroides ATCC 17029 putative phage integrase family protein YP_001045373.1 591994 R 349101 CDS YP_001045374.1 126464261 4898812 593120..594016 1 NC_009050.1 KEGG: rsp:RSP_6232 hypothetical protein; hypothetical protein 594016 4898812 Rsph17029_3510 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045374.1 593120 D 349101 CDS YP_001045375.1 126464262 4898722 594304..594699 1 NC_009050.1 PFAM: ribosomal protein L21; KEGG: rsp:RSP_3819 ribosomal protein L21; 50S ribosomal protein L21 594699 rplU 4898722 rplU Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L21 YP_001045375.1 594304 D 349101 CDS YP_001045376.1 126464263 4898723 594706..594975 1 NC_009050.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 594975 rpmA 4898723 rpmA Rhodobacter sphaeroides ATCC 17029 50S ribosomal protein L27 YP_001045376.1 594706 D 349101 CDS YP_001045377.1 126464264 4899111 595138..595677 1 NC_009050.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_3821 putative acetyltransferase; N-acetyltransferase GCN5 595677 4899111 Rsph17029_3513 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001045377.1 595138 D 349101 CDS YP_001045378.1 126464265 4899112 595772..596800 1 NC_009050.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 596800 obgE 4899112 obgE Rhodobacter sphaeroides ATCC 17029 GTPase ObgE YP_001045378.1 595772 D 349101 CDS YP_001045379.1 126464266 4899113 596788..597912 1 NC_009050.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 597912 4899113 Rsph17029_3515 Rhodobacter sphaeroides ATCC 17029 gamma-glutamyl kinase YP_001045379.1 596788 D 349101 CDS YP_001045380.1 126464267 4899177 597963..599225 1 NC_009050.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 599225 proA 4899177 proA Rhodobacter sphaeroides ATCC 17029 gamma-glutamyl phosphate reductase YP_001045380.1 597963 D 349101 CDS YP_001045381.1 126464268 4899178 complement(599229..599825) 1 NC_009050.1 KEGG: rsp:RSP_3825 hypothetical protein; hypothetical protein 599825 4899178 Rsph17029_3517 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045381.1 599229 R 349101 CDS YP_001045382.1 126464269 4899179 599859..600038 1 NC_009050.1 KEGG: rsp:RSP_6239 hypothetical protein; hypothetical protein 600038 4899179 Rsph17029_3518 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045382.1 599859 D 349101 CDS YP_001045383.1 126464270 4898315 600206..600991 1 NC_009050.1 KEGG: rsp:RSP_3826 hypothetical protein; hypothetical protein 600991 4898315 Rsph17029_3519 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045383.1 600206 D 349101 CDS YP_001045384.1 126464271 4898316 600988..601812 1 NC_009050.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rsp:RSP_3827 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 601812 4898316 Rsph17029_3520 Rhodobacter sphaeroides ATCC 17029 phospholipid/glycerol acyltransferase YP_001045384.1 600988 D 349101 CDS YP_001045385.1 126464272 4898317 complement(601832..602512) 1 NC_009050.1 PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase 602512 4898317 Rsph17029_3521 Rhodobacter sphaeroides ATCC 17029 thiamine monophosphate synthase YP_001045385.1 601832 R 349101 CDS YP_001045386.1 126464273 4898193 602566..603297 1 NC_009050.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rsp:RSP_3829 tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase 603297 4898193 Rsph17029_3522 Rhodobacter sphaeroides ATCC 17029 RNA methyltransferase YP_001045386.1 602566 D 349101 CDS YP_001045387.1 126464274 4898194 603379..603693 1 NC_009050.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rsp:RSP_3830 hypothetical protein; ethyl tert-butyl ether degradation EthD 603693 4898194 Rsph17029_3523 Rhodobacter sphaeroides ATCC 17029 ethyl tert-butyl ether degradation EthD YP_001045387.1 603379 D 349101 CDS YP_001045388.1 126464275 4898195 603778..604953 1 NC_009050.1 PFAM: cytochrome oxidase assembly; KEGG: rsp:RSP_3831 putative cytochrome oxidase assembly factor; cytochrome oxidase assembly 604953 4898195 Rsph17029_3524 Rhodobacter sphaeroides ATCC 17029 cytochrome oxidase assembly YP_001045388.1 603778 D 349101 CDS YP_001045389.1 126464276 4898831 604950..606431 1 NC_009050.1 PFAM: peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: rsp:RSP_3832 putative thermostable carboxypeptidase 1; carboxypeptidase Taq 606431 4898831 Rsph17029_3525 Rhodobacter sphaeroides ATCC 17029 carboxypeptidase Taq YP_001045389.1 604950 D 349101 CDS YP_001045390.1 126464277 4898832 606439..606693 1 NC_009050.1 hypothetical protein 606693 4898832 Rsph17029_3526 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045390.1 606439 D 349101 CDS YP_001045391.1 126464278 4898833 606833..606982 1 NC_009050.1 hypothetical protein 606982 4898833 Rsph17029_3527 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045391.1 606833 D 349101 CDS YP_001045392.1 126464279 4898466 complement(607303..608088) 1 NC_009050.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 608088 4898466 Rsph17029_3528 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase YP_001045392.1 607303 R 349101 CDS YP_001045393.1 126464280 4898467 608145..608570 1 NC_009050.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_3834 hypothetical protein; hypothetical protein 608570 4898467 Rsph17029_3529 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045393.1 608145 D 349101 CDS YP_001045394.1 126464281 4898468 complement(608577..608936) 1 NC_009050.1 PFAM: protein of unknown function DUF583; KEGG: rsp:RSP_3835 hypothetical protein; hypothetical protein 608936 4898468 Rsph17029_3530 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045394.1 608577 R 349101 CDS YP_001045395.1 126464282 4899058 609091..609387 1 NC_009050.1 KEGG: rsp:RSP_6211 hypothetical protein; hypothetical protein 609387 4899058 Rsph17029_3531 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045395.1 609091 D 349101 CDS YP_001045396.1 126464283 4899059 609384..611036 1 NC_009050.1 PFAM: Amidohydrolase 3; KEGG: rsp:RSP_3836 putative metal-dependent hydrolase; amidohydrolase 3 611036 4899059 Rsph17029_3532 Rhodobacter sphaeroides ATCC 17029 amidohydrolase 3 YP_001045396.1 609384 D 349101 CDS YP_001045397.1 126464284 4899009 617103..617420 1 NC_009050.1 KEGG: sil:SPOA0091 IS3 family transposase orfA; IS3 family transposase orfA 617420 4899009 Rsph17029_3533 Rhodobacter sphaeroides ATCC 17029 IS3 family transposase orfA YP_001045397.1 617103 D 349101 CDS YP_001045398.1 126464285 4899010 complement(618678..619532) 1 NC_009050.1 KEGG: sit:TM1040_3780 conserved hypothetical protein; hypothetical protein 619532 4899010 Rsph17029_3535 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045398.1 618678 R 349101 CDS YP_001045399.1 126464286 4899054 619640..620254 1 NC_009050.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sit:TM1040_3784 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 620254 4899054 Rsph17029_3536 Rhodobacter sphaeroides ATCC 17029 ECF subfamily RNA polymerase sigma-24 factor YP_001045399.1 619640 D 349101 CDS YP_001045400.1 126464287 4898808 620251..620955 1 NC_009050.1 KEGG: sit:TM1040_3783 conserved hypothetical protein; hypothetical protein 620955 4898808 Rsph17029_3537 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045400.1 620251 D 349101 CDS YP_001045401.1 126464288 4898809 621639..621995 1 NC_009050.1 KEGG: mlo:mll1500 glucose dehydrogenase; glucose dehydrogenase-like protein 621995 4898809 Rsph17029_3538 Rhodobacter sphaeroides ATCC 17029 glucose dehydrogenase-like protein YP_001045401.1 621639 D 349101 CDS YP_001045402.1 126464289 4898810 622008..624182 1 NC_009050.1 PFAM: Pyrrolo-quinoline quinone; KEGG: xcb:XC_2659 glucose dehydrogenase; quinoprotein glucose dehydrogenase 624182 4898810 Rsph17029_3539 Rhodobacter sphaeroides ATCC 17029 quinoprotein glucose dehydrogenase YP_001045402.1 622008 D 349101 CDS YP_001045403.1 126464290 4899099 624712..627891 1 NC_009050.1 PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rru:Rru_A1726 transcription-repair coupling factor; DEAD/DEAH box helicase 627891 4899099 Rsph17029_3540 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001045403.1 624712 D 349101 CDS YP_001045404.1 126464291 4899100 complement(627975..628964) 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rde:RD1_0833 periplasmic substrate-binding transport protein, putative; TRAP dicarboxylate transporter, DctP subunit 628964 4899100 Rsph17029_3541 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter, DctP subunit YP_001045404.1 627975 R 349101 CDS YP_001045405.1 126464292 4899101 complement(628996..630288) 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vvy:VVA1579 TRAP-type C4-dicarboxylate transport system, large permease component; TRAP dicarboxylate transporter, DctM subunit 630288 4899101 Rsph17029_3542 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter, DctM subunit YP_001045405.1 628996 R 349101 CDS YP_001045406.1 126464293 4898781 complement(630296..630793) 1 NC_009050.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rde:RD1_0832 C4-dicarboxylate transport system, small permease protein, putative; tripartite ATP-independent periplasmic transporter DctQ 630793 4898781 Rsph17029_3543 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001045406.1 630296 R 349101 CDS YP_001045407.1 126464294 4898782 complement(630787..632187) 1 NC_009050.1 PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mlo:mlr1886 D-mannonate oxidoreductase; mannitol dehydrogenase domain-containing protein 632187 4898782 Rsph17029_3544 Rhodobacter sphaeroides ATCC 17029 mannitol dehydrogenase domain-containing protein YP_001045407.1 630787 R 349101 CDS YP_001045408.1 126464295 4898783 complement(632192..633229) 1 NC_009050.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rde:RD1_1048 L-idonate 5-dehydrogenase, putative; alcohol dehydrogenase 633229 4898783 Rsph17029_3545 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001045408.1 632192 R 349101 CDS YP_001045409.1 126464296 4898301 633405..634247 1 NC_009050.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rle:RL1496 putative sugar isomerase family protein; RpiR family transcriptional regulator 634247 4898301 Rsph17029_3546 Rhodobacter sphaeroides ATCC 17029 RpiR family transcriptional regulator YP_001045409.1 633405 D 349101 CDS YP_001045410.1 126464297 4898302 634348..636288 1 NC_009050.1 PFAM: PfkB domain protein; KEGG: pde:Pden_1676 PfkB domain protein; ribokinase-like domain-containing protein 636288 4898302 Rsph17029_3547 Rhodobacter sphaeroides ATCC 17029 ribokinase-like domain-containing protein YP_001045410.1 634348 D 349101 CDS YP_001045411.1 126464298 4898303 636759..637409 1 NC_009050.1 PFAM: regulatory protein, TetR; KEGG: tfu:Tfu_2799 TetR/AcrR family transcriptional regulator; TetR family transcriptional regulator 637409 4898303 Rsph17029_3548 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001045411.1 636759 D 349101 CDS YP_001045412.1 126464299 4898420 637474..638196 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rxy:Rxyl_0346 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 638196 4898420 Rsph17029_3549 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045412.1 637474 D 349101 CDS YP_001045413.1 126464300 4898421 638186..639748 1 NC_009050.1 PFAM: AMP-dependent synthetase and ligase; KEGG: nfa:nfa55900 acyl-CoA synthase; AMP-dependent synthetase and ligase 639748 4898421 Rsph17029_3550 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001045413.1 638186 D 349101 CDS YP_001045414.1 126464301 4898422 639798..640967 1 NC_009050.1 PFAM: Extracellular ligand-binding receptor; KEGG: fnu:FN1432 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein; extracellular ligand-binding receptor 640967 4898422 Rsph17029_3551 Rhodobacter sphaeroides ATCC 17029 extracellular ligand-binding receptor YP_001045414.1 639798 D 349101 CDS YP_001045415.1 126464302 4899079 640991..641860 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: dge:Dgeo_2166 inner-membrane translocator; inner-membrane translocator 641860 4899079 Rsph17029_3552 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045415.1 640991 D 349101 CDS YP_001045416.1 126464303 4899080 641860..642855 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: gsu:GSU1732 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 642855 4899080 Rsph17029_3553 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045416.1 641860 D 349101 CDS YP_001045417.1 126464304 4898429 642852..643562 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU3392 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter 643562 4898429 Rsph17029_3554 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045417.1 642852 D 349101 CDS YP_001045418.1 126464305 4898430 643555..644253 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1294 ABC-type branched-chain amino acid transport systems ATPase component; ABC transporter 644253 4898430 Rsph17029_3555 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045418.1 643555 D 349101 CDS YP_001045419.1 126464306 4898431 644266..645039 1 NC_009050.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B0420 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 645039 4898431 Rsph17029_3556 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase/isomerase YP_001045419.1 644266 D 349101 CDS YP_001045420.1 126464307 4898932 645039..645752 1 NC_009050.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL0183 putative enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase/isomerase 645752 4898932 Rsph17029_3557 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase/isomerase YP_001045420.1 645039 D 349101 CDS YP_001045421.1 126464308 4898933 645995..646381 1 NC_009050.1 hypothetical protein 646381 4898933 Rsph17029_3558 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045421.1 645995 D 349101 CDS YP_001045422.1 126464309 4898934 646486..648609 1 NC_009050.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpb:RPB_2554 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 648609 4898934 Rsph17029_3559 Rhodobacter sphaeroides ATCC 17029 TonB-dependent siderophore receptor YP_001045422.1 646486 D 349101 CDS YP_001045423.1 126464310 4898741 648959..650356 1 NC_009050.1 PFAM: PepSY-associated TM helix domain protein; KEGG: sit:TM1040_0303 PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 650356 4898741 Rsph17029_3560 Rhodobacter sphaeroides ATCC 17029 PepSY-associated TM helix domain-containing protein YP_001045423.1 648959 D 349101 CDS YP_001045424.1 126464311 4898742 complement(650748..651383) 1 NC_009050.1 KEGG: pde:Pden_0116 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 651383 4898742 Rsph17029_3561 Rhodobacter sphaeroides ATCC 17029 hexapaptide repeat-containing transferase YP_001045424.1 650748 R 349101 CDS YP_001045425.1 126464312 4898743 652052..652429 1 NC_009050.1 KEGG: rru:Rru_A3547 hypothetical protein; hypothetical protein 652429 4898743 Rsph17029_3562 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045425.1 652052 D 349101 CDS YP_001045426.1 126464313 4899193 complement(652686..654140) 1 NC_009050.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 654140 4899193 Rsph17029_3563 Rhodobacter sphaeroides ATCC 17029 cobyric acid synthase YP_001045426.1 652686 R 349101 CDS YP_001045427.1 126464314 4899194 complement(654187..655749) 1 NC_009050.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 655749 4899194 Rsph17029_3564 Rhodobacter sphaeroides ATCC 17029 cobyric acid synthase YP_001045427.1 654187 R 349101 CDS YP_001045428.1 126464315 4899195 complement(656041..656718) 1 NC_009050.1 KEGG: rsp:RSP_3186 hypothetical protein; hypothetical protein 656718 4899195 Rsph17029_3565 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045428.1 656041 R 349101 CDS YP_001045429.1 126464316 4898121 657090..658289 1 NC_009050.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpc:RPC_3502 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 658289 4898121 Rsph17029_3566 Rhodobacter sphaeroides ATCC 17029 cobalamin synthesis protein, P47K YP_001045429.1 657090 D 349101 CDS YP_001045430.1 126464317 4898122 658286..658528 1 NC_009050.1 KEGG: jan:Jann_2252 hypothetical protein; hypothetical protein 658528 4898122 Rsph17029_3567 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045430.1 658286 D 349101 CDS YP_001045431.1 126464318 4898123 complement(658816..659739) 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mlo:mlr7815 transcriptional regulator; LysR family transcriptional regulator 659739 4898123 Rsph17029_3568 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001045431.1 658816 R 349101 CDS YP_001045432.1 126464319 4898376 659831..660643 1 NC_009050.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sme:SMc03185 putative NADPH dehydrogenase quinone reductase transmembrane protein; NAD(P)H dehydrogenase (quinone) 660643 4898376 Rsph17029_3569 Rhodobacter sphaeroides ATCC 17029 NAD(P)H dehydrogenase (quinone) YP_001045432.1 659831 D 349101 CDS YP_001045433.1 126464320 4898377 660974..661633 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sma:SAV7278 GntR-family transcriptional regulator; regulatory protein GntR 661633 4898377 Rsph17029_3570 Rhodobacter sphaeroides ATCC 17029 regulatory protein GntR YP_001045433.1 660974 D 349101 CDS YP_001045434.1 126464321 4898378 661683..662663 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb21438 putative C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide; TRAP dicarboxylate transporter, DctP subunit 662663 4898378 Rsph17029_3571 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter, DctP subunit YP_001045434.1 661683 D 349101 CDS YP_001045435.1 126464322 4898362 662670..663161 1 NC_009050.1 KEGG: bcl:ABC4078 C4-dicarboxylate transport system permease small protein; hypothetical protein 663161 4898362 Rsph17029_3572 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045435.1 662670 D 349101 CDS YP_001045436.1 126464323 4898363 663161..664459 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: csa:Csal_3212 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter, DctM subunit 664459 4898363 Rsph17029_3573 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter, DctM subunit YP_001045436.1 663161 D 349101 CDS YP_001045437.1 126464324 4898295 664475..665638 1 NC_009050.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bxe:Bxe_B0994 putative mandelate racemase / muconatelactonizing enzyme; mandelate racemase/muconate lactonizing protein 665638 4898295 Rsph17029_3574 Rhodobacter sphaeroides ATCC 17029 mandelate racemase/muconate lactonizing protein YP_001045437.1 664475 D 349101 CDS YP_001045438.1 126464325 4898296 665809..666381 1 NC_009050.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_0244 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 666381 4898296 Rsph17029_3575 Rhodobacter sphaeroides ATCC 17029 N-acetyltransferase GCN5 YP_001045438.1 665809 D 349101 CDS YP_001045439.1 126464326 4898297 complement(666439..667356) 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppu:PP_2054 transcriptional regulator, LysR family; LysR family transcriptional regulator 667356 4898297 Rsph17029_3576 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001045439.1 666439 R 349101 CDS YP_001045440.1 126464327 4898387 667469..668548 1 NC_009050.1 PFAM: protein of unknown function DUF453; KEGG: pfl:PFL_2497 protein of unknown function (DUF453) superfamily; hypothetical protein 668548 4898387 Rsph17029_3577 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045440.1 667469 D 349101 CDS YP_001045441.1 126464328 4898388 668586..669671 1 NC_009050.1 PFAM: Uncharacterized protein UPF0065; KEGG: csa:Csal_0164 uncharacterized protein UPF0065; hypothetical protein 669671 4898388 Rsph17029_3578 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045441.1 668586 D 349101 CDS YP_001045442.1 126464329 4898389 669724..671670 1 NC_009050.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: csa:Csal_0165 protein of unknown function DUF112, transmembrane; hypothetical protein 671670 4898389 Rsph17029_3579 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045442.1 669724 D 349101 CDS YP_001045443.1 126464330 4898298 complement(671733..672329) 1 NC_009050.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: bur:Bcep18194_C7686 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 672329 4898298 Rsph17029_3580 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase domain-containing protein YP_001045443.1 671733 R 349101 CDS YP_001045444.1 126464331 4898299 complement(672334..673695) 1 NC_009050.1 PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_B0284 putative MmgE/PRP family protein; MmgE/PrpD family protein 673695 4898299 Rsph17029_3581 Rhodobacter sphaeroides ATCC 17029 MmgE/PrpD family protein YP_001045444.1 672334 R 349101 CDS YP_001045445.1 126464332 4898300 complement(673710..675065) 1 NC_009050.1 PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_B0284 putative MmgE/PRP family protein; MmgE/PrpD family protein 675065 4898300 Rsph17029_3582 Rhodobacter sphaeroides ATCC 17029 MmgE/PrpD family protein YP_001045445.1 673710 R 349101 CDS YP_001045446.1 126464333 4898250 complement(675071..676459) 1 NC_009050.1 PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_B0284 putative MmgE/PRP family protein; MmgE/PrpD family protein 676459 4898250 Rsph17029_3583 Rhodobacter sphaeroides ATCC 17029 MmgE/PrpD family protein YP_001045446.1 675071 R 349101 CDS YP_001045447.1 126464334 4898251 complement(676515..677282) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1750 ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit BztD; ABC transporter 677282 4898251 Rsph17029_3584 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045447.1 676515 R 349101 CDS YP_001045448.1 126464335 4898252 complement(677305..678417) 1 NC_009050.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2913 probable ABC transporter permease protein; polar amino acid ABC transporter, inner membrane subunit 678417 4898252 Rsph17029_3585 Rhodobacter sphaeroides ATCC 17029 polar amino acid ABC transporter, inner membrane subunit YP_001045448.1 677305 R 349101 CDS YP_001045449.1 126464336 4898154 complement(678422..679618) 1 NC_009050.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpa:BPP3974 putative amino acid ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 679618 4898154 Rsph17029_3586 Rhodobacter sphaeroides ATCC 17029 polar amino acid ABC transporter inner membrane subunit YP_001045449.1 678422 R 349101 CDS YP_001045450.1 126464337 4898155 complement(679707..680744) 1 NC_009050.1 SMART: extracellular solute-binding protein, family 3; KEGG: sme:SMc02118 probable general L-amino acid-binding periplasmic ABC transporter protein; extracellular solute-binding protein 680744 4898155 Rsph17029_3587 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045450.1 679707 R 349101 CDS YP_001045451.1 126464338 4898156 680860..682026 1 NC_009050.1 KEGG: rru:Rru_A1613 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; cystathionine beta-lyase 682026 4898156 Rsph17029_3588 Rhodobacter sphaeroides ATCC 17029 cystathionine beta-lyase YP_001045451.1 680860 D 349101 CDS YP_001045452.1 126464339 4898858 682170..682826 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: jan:Jann_1244 transcriptional regulator, GntR family; GntR family transcriptional regulator 682826 4898858 Rsph17029_3589 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045452.1 682170 D 349101 CDS YP_001045453.1 126464340 4899075 683760..684179 1 NC_009050.1 hypothetical protein 684179 4899075 Rsph17029_3591 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045453.1 683760 D 349101 CDS YP_001045454.1 126464341 4898860 complement(684160..685119) 1 NC_009050.1 KEGG: rru:Rru_A2387 ABC transporter, periplasmic substrate-binding protein, putative; ABC transporter, periplasmic substrate-binding protein, putative 685119 4898860 Rsph17029_3592 Rhodobacter sphaeroides ATCC 17029 ABC transporter, periplasmic substrate-binding protein, putative YP_001045454.1 684160 R 349101 CDS YP_001045455.1 126464342 4898366 complement(685116..686003) 1 NC_009050.1 PFAM: ABC-3 protein; KEGG: psb:Psyr_1949 ABC-3; ABC-3 protein 686003 4898366 Rsph17029_3593 Rhodobacter sphaeroides ATCC 17029 ABC-3 protein YP_001045455.1 685116 R 349101 CDS YP_001045456.1 126464343 4898367 complement(686000..686752) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_33550 putative ATP-binding component of ABC transporter; ABC transporter 686752 4898367 Rsph17029_3594 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045456.1 686000 R 349101 CDS YP_001045457.1 126464344 4898517 complement(686749..687669) 1 NC_009050.1 PFAM: periplasmic solute binding protein; KEGG: pst:PSPTO_2141 cation ABC transporter, periplasmic cation-binding protein; periplasmic solute binding protein 687669 4898517 Rsph17029_3595 Rhodobacter sphaeroides ATCC 17029 periplasmic solute binding protein YP_001045457.1 686749 R 349101 CDS YP_001045458.1 126464345 4898518 complement(687666..688220) 1 NC_009050.1 KEGG: pae:PA2406 hypothetical protein; hypothetical protein 688220 4898518 Rsph17029_3596 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045458.1 687666 R 349101 CDS YP_001045459.1 126464346 4898519 complement(688217..688543) 1 NC_009050.1 KEGG: pau:PA14_33580 hypothetical protein; hypothetical protein 688543 4898519 Rsph17029_3597 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045459.1 688217 R 349101 CDS YP_001045460.1 126464347 4898784 complement(688540..689367) 1 NC_009050.1 KEGG: psp:PSPPH_1920 hypothetical protein; hypothetical protein 689367 4898784 Rsph17029_3598 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045460.1 688540 R 349101 CDS YP_001045461.1 126464348 4898785 complement(689364..689660) 1 NC_009050.1 KEGG: pfl:PFL_0985 hypothetical protein; hypothetical protein 689660 4898785 Rsph17029_3599 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045461.1 689364 R 349101 CDS YP_001045462.1 126464349 4898786 complement(689644..691299) 1 NC_009050.1 PFAM: PepSY-associated TM helix domain protein; KEGG: xcv:XCV0278 hypothetical protein; PepSY-associated TM helix domain-containing protein 691299 4898786 Rsph17029_3600 Rhodobacter sphaeroides ATCC 17029 PepSY-associated TM helix domain-containing protein YP_001045462.1 689644 R 349101 CDS YP_001045463.1 126464350 4898448 complement(691370..693880) 1 NC_009050.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; KEGG: nwi:Nwi_1732 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 693880 4898448 Rsph17029_3601 Rhodobacter sphaeroides ATCC 17029 TonB-dependent siderophore receptor YP_001045463.1 691370 R 349101 CDS YP_001045464.1 126464351 4898449 complement(694017..694979) 1 NC_009050.1 PFAM: FecR protein; KEGG: rru:Rru_A1439 putative FecR; putative FecR protein 694979 4898449 Rsph17029_3602 Rhodobacter sphaeroides ATCC 17029 putative FecR protein YP_001045464.1 694017 R 349101 CDS YP_001045465.1 126464352 4898450 complement(695097..695618) 1 NC_009050.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpc:RPC_2994 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 695618 4898450 Rsph17029_3603 Rhodobacter sphaeroides ATCC 17029 ECF subfamily RNA polymerase sigma-24 factor YP_001045465.1 695097 R 349101 CDS YP_001045466.1 126464353 4898339 complement(696149..696793) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: reh:H16_B1722 transcriptional regulator; GntR family transcriptional regulator 696793 4898339 Rsph17029_3604 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045466.1 696149 R 349101 CDS YP_001045467.1 126464354 4898340 697236..698102 1 NC_009050.1 PFAM: transcriptional regulator TrmB; KEGG: bbr:BB3556 putative transcriptional regulator; transcriptional regulator TrmB 698102 4898340 Rsph17029_3605 Rhodobacter sphaeroides ATCC 17029 transcriptional regulator TrmB YP_001045467.1 697236 D 349101 CDS YP_001045468.1 126464355 4898341 complement(698358..698657) 1 NC_009050.1 KEGG: bxe:Bxe_A2050 putative tricarboxylic transporter, TctA (12TM)subunit; hypothetical protein 698657 4898341 Rsph17029_3606 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045468.1 698358 R 349101 CDS YP_001045469.1 126464356 4898409 complement(698976..700184) 1 NC_009050.1 PFAM: protein of unknown function DUF453; KEGG: bbr:BB3558 hypothetical protein; hypothetical protein 700184 4898409 Rsph17029_3607 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045469.1 698976 R 349101 CDS YP_001045470.1 126464357 4898410 complement(700192..701598) 1 NC_009050.1 PFAM: MmgE/PrpD family protein; KEGG: bbr:BB3562 hypothetical protein; MmgE/PrpD family protein 701598 4898410 Rsph17029_3608 Rhodobacter sphaeroides ATCC 17029 MmgE/PrpD family protein YP_001045470.1 700192 R 349101 CDS YP_001045471.1 126464358 4898411 701977..702534 1 NC_009050.1 PFAM: Chromate transporter; KEGG: bch:Bcen2424_3011 chromate transporter; chromate transporter 702534 4898411 Rsph17029_3609 Rhodobacter sphaeroides ATCC 17029 chromate transporter YP_001045471.1 701977 D 349101 CDS YP_001045472.1 126464359 4898392 702537..703064 1 NC_009050.1 PFAM: Chromate transporter; KEGG: rpa:RPA3497 possible chromate transporter related to ChrA; chromate transporter 703064 4898392 Rsph17029_3610 Rhodobacter sphaeroides ATCC 17029 chromate transporter YP_001045472.1 702537 D 349101 CDS YP_001045473.1 126464360 4898393 complement(703106..703933) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB3563 putative ATP-binding protein of a transporter; ABC transporter 703933 4898393 Rsph17029_3611 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045473.1 703106 R 349101 CDS YP_001045474.1 126464361 4898394 complement(703920..704750) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB3564 probable inner membrane component of binding-protein-dependent transport system; binding-protein-dependent transport system inner membrane protein 704750 4898394 Rsph17029_3612 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045474.1 703920 R 349101 CDS YP_001045475.1 126464362 4898225 complement(704747..705880) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB3565 probable inner membrane component of binding-protein-dependent transport system; binding-protein-dependent transport system inner membrane protein 705880 4898225 Rsph17029_3613 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045475.1 704747 R 349101 CDS YP_001045476.1 126464363 4898226 706026..706949 1 NC_009050.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: mlo:mlr4742 2-dehydro-3-deoxygalactonate kinase; 2-keto-3-deoxy-galactonokinase 706949 4898226 Rsph17029_3614 Rhodobacter sphaeroides ATCC 17029 2-keto-3-deoxy-galactonokinase YP_001045476.1 706026 D 349101 CDS YP_001045477.1 126464364 4898187 706957..707583 1 NC_009050.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 707583 4898187 Rsph17029_3615 Rhodobacter sphaeroides ATCC 17029 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_001045477.1 706957 D 349101 CDS YP_001045478.1 126464365 4898188 complement(707605..708363) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: ilo:IL0306 transcriptional regulator, FadR family; GntR family transcriptional regulator 708363 4898188 Rsph17029_3616 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045478.1 707605 R 349101 CDS YP_001045479.1 126464366 4898189 complement(708458..710257) 1 NC_009050.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 710257 4898189 Rsph17029_3617 Rhodobacter sphaeroides ATCC 17029 dihydroxy-acid dehydratase YP_001045479.1 708458 R 349101 CDS YP_001045480.1 126464367 4898662 complement(710324..711640) 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sil:SPOA0333 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 711640 4898662 Rsph17029_3618 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001045480.1 710324 R 349101 CDS YP_001045481.1 126464368 4898663 complement(711637..712233) 1 NC_009050.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: sil:SPOA0334 TRAP dicarboxylate family transporter, DctQ subunit; tripartite ATP-independent periplasmic transporter DctQ 712233 4898663 Rsph17029_3619 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001045481.1 711637 R 349101 CDS YP_001045482.1 126464369 4898664 complement(712331..713422) 1 NC_009050.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sil:SPOA0335 TRAP dicarboxylate family transporter, DctP subunit; TRAP dicarboxylate transporter- DctP subunit 713422 4898664 Rsph17029_3620 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001045482.1 712331 R 349101 CDS YP_001045483.1 126464370 4898100 complement(713403..714446) 1 NC_009050.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 11; KEGG: bja:blr5278 IdnD L-idonate 5-dehydrogenase; alcohol dehydrogenase 714446 4898100 Rsph17029_3621 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001045483.1 713403 R 349101 CDS YP_001045484.1 126464371 4898101 complement(714446..715213) 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: atc:AGR_C_2598 probable gluconate dehydrogenase; short-chain dehydrogenase/reductase SDR 715213 4898101 Rsph17029_3622 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045484.1 714446 R 349101 CDS YP_001045485.1 126464372 4898102 complement(715214..716428) 1 NC_009050.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bja:blr5276 hypothetical protein; mandelate racemase/muconate lactonizing protein 716428 4898102 Rsph17029_3623 Rhodobacter sphaeroides ATCC 17029 mandelate racemase/muconate lactonizing protein YP_001045485.1 715214 R 349101 CDS YP_001045486.1 126464373 4898603 complement(716615..717763) 1 NC_009050.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: sme:SMb20510 probable galactonate dehydratase protein; galactonate dehydratase 717763 4898603 Rsph17029_3624 Rhodobacter sphaeroides ATCC 17029 galactonate dehydratase YP_001045486.1 716615 R 349101 CDS YP_001045487.1 126464374 4898604 complement(718088..718696) 1 NC_009050.1 hypothetical protein 718696 4898604 Rsph17029_3625 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045487.1 718088 R 349101 CDS YP_001045488.1 126464375 4898605 complement(718797..720449) 1 NC_009050.1 PFAM: Animal haem peroxidase; KEGG: rde:RD1_1072 putative cyclooxygenase; heme peroxidase 720449 4898605 Rsph17029_3626 Rhodobacter sphaeroides ATCC 17029 heme peroxidase YP_001045488.1 718797 R 349101 CDS YP_001045489.1 126464376 4898135 complement(720446..721765) 1 NC_009050.1 KEGG: bja:bll0020 hypothetical protein; hypothetical protein 721765 4898135 Rsph17029_3627 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045489.1 720446 R 349101 CDS YP_001045490.1 126464377 4898136 722254..724104 1 NC_009050.1 hypothetical protein 724104 4898136 Rsph17029_3628 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045490.1 722254 D 349101 CDS YP_001045491.1 126464378 4898137 724104..725129 1 NC_009050.1 hypothetical protein 725129 4898137 Rsph17029_3629 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045491.1 724104 D 349101 CDS YP_001045492.1 126464379 4898211 complement(725269..728628) 1 NC_009050.1 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase 728628 4898211 Rsph17029_3630 Rhodobacter sphaeroides ATCC 17029 2-oxoacid ferredoxin oxidoreductase YP_001045492.1 725269 R 349101 CDS YP_001045493.1 126464380 4898212 complement(728625..730016) 1 NC_009050.1 PFAM: FAD linked oxidase domain protein; KEGG: mlo:mlr7184 hypothetical protein; FAD linked oxidase domain-containing protein 730016 4898212 Rsph17029_3631 Rhodobacter sphaeroides ATCC 17029 FAD linked oxidase domain-containing protein YP_001045493.1 728625 R 349101 CDS YP_001045494.1 126464381 4898213 730196..731209 1 NC_009050.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rle:pRL120182 putative alcohol dehydrogenase; alcohol dehydrogenase 731209 4898213 Rsph17029_3632 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001045494.1 730196 D 349101 CDS YP_001045495.1 126464382 4898143 731223..732032 1 NC_009050.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rle:pRL120176 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 732032 4898143 Rsph17029_3633 Rhodobacter sphaeroides ATCC 17029 enoyl-CoA hydratase/isomerase YP_001045495.1 731223 D 349101 CDS YP_001045496.1 126464383 4898144 complement(732049..733731) 1 NC_009050.1 PFAM: AMP-dependent synthetase and ligase; KEGG: psb:Psyr_2726 feruloyl-CoA synthase; AMP-dependent synthetase and ligase 733731 4898144 Rsph17029_3634 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001045496.1 732049 R 349101 CDS YP_001045497.1 126464384 4898643 complement(733740..734486) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: rle:pRL120181 putative GntR family transcriptional regulator; regulatory protein GntR 734486 4898643 Rsph17029_3635 Rhodobacter sphaeroides ATCC 17029 regulatory protein GntR YP_001045497.1 733740 R 349101 CDS YP_001045498.1 126464385 4898644 734649..735680 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rle:pRL120172 putative substrate-binding component of ABC transporter; extracellular solute-binding protein 735680 4898644 Rsph17029_3636 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045498.1 734649 D 349101 CDS YP_001045499.1 126464386 4898645 735774..736817 1 NC_009050.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_4419 ABC transporter related; ABC transporter 736817 4898645 Rsph17029_3637 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045499.1 735774 D 349101 CDS YP_001045500.1 126464387 4899011 736814..737689 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120170 putative permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 737689 4899011 Rsph17029_3638 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045500.1 736814 D 349101 CDS YP_001045501.1 126464388 4899012 737686..738492 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120169 putative permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 738492 4899012 Rsph17029_3639 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045501.1 737686 D 349101 CDS YP_001045502.1 126464389 4899013 complement(738799..739554) 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mes:Meso_3619 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 739554 4899013 Rsph17029_3640 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045502.1 738799 R 349101 CDS YP_001045503.1 126464390 4898597 complement(739545..740549) 1 NC_009050.1 PFAM: Transketolase, central region; Transketolase domain protein; KEGG: mes:Meso_3618 transketolase, central region; transketolase, central region 740549 4898597 Rsph17029_3641 Rhodobacter sphaeroides ATCC 17029 transketolase, central region YP_001045503.1 739545 R 349101 CDS YP_001045504.1 126464391 4898598 complement(740546..741391) 1 NC_009050.1 PFAM: Transketolase domain protein; KEGG: mes:Meso_3617 transketolase-like; transketolase domain-containing protein 741391 4898598 Rsph17029_3642 Rhodobacter sphaeroides ATCC 17029 transketolase domain-containing protein YP_001045504.1 740546 R 349101 CDS YP_001045505.1 126464392 4898599 complement(741408..742271) 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_3616 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 742271 4898599 Rsph17029_3643 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045505.1 741408 R 349101 CDS YP_001045506.1 126464393 4898756 complement(742286..744148) 1 NC_009050.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mes:Meso_3615 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 744148 4898756 Rsph17029_3644 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001045506.1 742286 R 349101 CDS YP_001045507.1 126464394 4898757 complement(744256..745269) 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mes:Meso_3614 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter, DctP subunit 745269 4898757 Rsph17029_3645 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter, DctP subunit YP_001045507.1 744256 R 349101 CDS YP_001045508.1 126464395 4898758 745480..746352 1 NC_009050.1 PFAM: regulatory proteins, IclR; KEGG: mes:Meso_3613 transcriptional regulator, IclR family; regulatory proteins, IclR 746352 4898758 Rsph17029_3646 Rhodobacter sphaeroides ATCC 17029 regulatory proteins, IclR YP_001045508.1 745480 D 349101 CDS YP_001045509.1 126464396 4898201 746336..747223 1 NC_009050.1 KEGG: mes:Meso_3612 hypothetical protein; hypothetical protein 747223 4898201 Rsph17029_3647 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045509.1 746336 D 349101 CDS YP_001045510.1 126464397 4898202 747227..749518 1 NC_009050.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mes:Meso_3611 molybdopterin oxidoreductase; molybdopterin oxidoreductase 749518 4898202 Rsph17029_3648 Rhodobacter sphaeroides ATCC 17029 molybdopterin oxidoreductase YP_001045510.1 747227 D 349101 CDS YP_001045511.1 126464398 4898203 749777..750427 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_1715 transcriptional regulator, GntR family; GntR family transcriptional regulator 750427 4898203 Rsph17029_3649 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045511.1 749777 D 349101 CDS YP_001045512.1 126464399 4898799 750982..751866 1 NC_009050.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 751866 4898799 Rsph17029_3650 Rhodobacter sphaeroides ATCC 17029 3-hydroxybutyryl-CoA dehydrogenase YP_001045512.1 750982 D 349101 CDS YP_001045513.1 126464400 4898800 752043..753098 1 NC_009050.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hch:HCH_04273 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; TRAP dicarboxylate transporter- DctP subunit 753098 4898800 Rsph17029_3651 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter- DctP subunit YP_001045513.1 752043 D 349101 CDS YP_001045514.1 126464401 4898801 753196..753816 1 NC_009050.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: hch:HCH_04274 TRAP-type mannitol/chloroaromatic compound transport system, small permease component; tripartite ATP-independent periplasmic transporter DctQ 753816 4898801 Rsph17029_3652 Rhodobacter sphaeroides ATCC 17029 tripartite ATP-independent periplasmic transporter DctQ YP_001045514.1 753196 D 349101 CDS YP_001045515.1 126464402 4898304 753816..755177 1 NC_009050.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: hch:HCH_04275 TRAP-type mannitol/chloroaromatic compound transport system, large permease component; TRAP dicarboxylate transporter subunit DctM 755177 4898304 Rsph17029_3653 Rhodobacter sphaeroides ATCC 17029 TRAP dicarboxylate transporter subunit DctM YP_001045515.1 753816 D 349101 CDS YP_001045516.1 126464403 4898305 755412..755819 1 NC_009050.1 PFAM: cobalamin B12-binding domain protein; KEGG: nca:Noca_2128 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 755819 4898305 Rsph17029_3654 Rhodobacter sphaeroides ATCC 17029 cobalamin B12-binding domain-containing protein YP_001045516.1 755412 D 349101 CDS YP_001045517.1 126464404 4898631 755819..757264 1 NC_009050.1 KEGG: rru:Rru_A0790 phenylacetate--CoA ligase; phenylacetate--CoA ligase 757264 4898631 Rsph17029_3655 Rhodobacter sphaeroides ATCC 17029 phenylacetate--CoA ligase YP_001045517.1 755819 D 349101 CDS YP_001045518.1 126464405 4898632 757264..758235 1 NC_009050.1 KEGG: ade:Adeh_1649 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 758235 4898632 Rsph17029_3656 Rhodobacter sphaeroides ATCC 17029 LAO/AO transport system ATPase YP_001045518.1 757264 D 349101 CDS YP_001045519.1 126464406 4898633 758228..759919 1 NC_009050.1 KEGG: pab:PAB1800 methylmalonyl-CoA mutase, subunit alpha, N-terminus; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 759919 4898633 Rsph17029_3657 Rhodobacter sphaeroides ATCC 17029 methylmalonyl-CoA mutase large subunit YP_001045519.1 758228 D 349101 CDS YP_001045520.1 126464407 4898306 759923..760210 1 NC_009050.1 hypothetical protein 760210 4898306 Rsph17029_3658 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045520.1 759923 D 349101 CDS YP_001045521.1 126464408 4898307 760203..761246 1 NC_009050.1 KEGG: aeh:Mlg_0205 transferase hexapeptide repeat containing protein; carbonic anhydrase 761246 4898307 Rsph17029_3659 Rhodobacter sphaeroides ATCC 17029 carbonic anhydrase YP_001045521.1 760203 D 349101 CDS YP_001045522.1 126464409 4898308 761247..761822 1 NC_009050.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: psp:PSPPH_4096 ATP:cob(I)alamin adenosyltransferase, putative; ATP--cobalamin adenosyltransferase 761822 4898308 Rsph17029_3660 Rhodobacter sphaeroides ATCC 17029 ATP--cobalamin adenosyltransferase YP_001045522.1 761247 D 349101 CDS YP_001045523.1 126464410 4898606 complement(761911..762777) 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sil:SPOA0344 transcriptional regulator, LysR family; LysR family transcriptional regulator 762777 4898606 Rsph17029_3661 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001045523.1 761911 R 349101 CDS YP_001045524.1 126464411 4898607 762874..763785 1 NC_009050.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: bca:BCE_4826 hypothetical protein; hypothetical protein 763785 4898607 Rsph17029_3662 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045524.1 762874 D 349101 CDS YP_001045525.1 126464412 4898608 763877..764431 1 NC_009050.1 PFAM: protein of unknown function DUF1089; KEGG: mlo:mll3441 hypothetical protein; hypothetical protein 764431 4898608 Rsph17029_3663 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045525.1 763877 D 349101 CDS YP_001045526.1 126464413 4898640 complement(764439..765479) 1 NC_009050.1 PFAM: glycosyl transferase, group 1; KEGG: rde:RD1_2341 glycosyltransferase, putative; group 1 glycosyl transferase 765479 4898640 Rsph17029_3664 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001045526.1 764439 R 349101 CDS YP_001045527.1 126464414 4898641 complement(765476..766999) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2342 ABC transporter, permease protein, putative; binding-protein-dependent transport systems inner membrane component 766999 4898641 Rsph17029_3665 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045527.1 765476 R 349101 CDS YP_001045528.1 126464415 4898642 complement(766996..767796) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: jan:Jann_0307 ABC transporter related; ABC transporter 767796 4898642 Rsph17029_3666 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045528.1 766996 R 349101 CDS YP_001045529.1 126464416 4898657 complement(767789..768796) 1 NC_009050.1 KEGG: rde:RD1_2344 hypothetical protein; hypothetical protein 768796 4898657 Rsph17029_3667 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045529.1 767789 R 349101 CDS YP_001045530.1 126464417 4898658 complement(768911..770437) 1 NC_009050.1 KEGG: pde:Pden_4358 sulfatase; sulfatase 770437 4898658 Rsph17029_3668 Rhodobacter sphaeroides ATCC 17029 sulfatase YP_001045530.1 768911 R 349101 CDS YP_001045531.1 126464418 4898659 complement(770419..771102) 1 NC_009050.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rde:RD1_2347 hypothetical protein; CDP-alcohol phosphatidyltransferase 771102 4898659 Rsph17029_3669 Rhodobacter sphaeroides ATCC 17029 CDP-alcohol phosphatidyltransferase YP_001045531.1 770419 R 349101 CDS YP_001045532.1 126464419 4899014 771633..772169 1 NC_009050.1 PFAM: cytochrome B561; KEGG: jan:Jann_0302 cytochrome b561; cytochrome B561 772169 4899014 Rsph17029_3670 Rhodobacter sphaeroides ATCC 17029 cytochrome B561 YP_001045532.1 771633 D 349101 CDS YP_001045533.1 126464420 4899015 complement(772679..773914) 1 NC_009050.1 TIGRFAM: 4-coumarate--CoA ligase; KEGG: ilo:IL2386 4-coumarate-CoA ligase, putative; 4-coumarate--CoA ligase 773914 4899015 Rsph17029_3671 Rhodobacter sphaeroides ATCC 17029 4-coumarate--CoA ligase YP_001045533.1 772679 R 349101 CDS YP_001045534.1 126464421 4899016 complement(773926..774426) 1 NC_009050.1 hypothetical protein 774426 4899016 Rsph17029_3672 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045534.1 773926 R 349101 CDS YP_001045535.1 126464422 4898364 complement(774423..774989) 1 NC_009050.1 hypothetical protein 774989 4898364 Rsph17029_3673 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045535.1 774423 R 349101 CDS YP_001045536.1 126464423 4898365 complement(775004..775378) 1 NC_009050.1 TIGRFAM: photoactive yellow protein; KEGG: ilo:IL2385 photoactive yellow protein; photoactive yellow protein 775378 4898365 Rsph17029_3674 Rhodobacter sphaeroides ATCC 17029 photoactive yellow protein YP_001045536.1 775004 R 349101 CDS YP_001045537.1 126464424 4898819 complement(775403..775831) 1 NC_009050.1 hypothetical protein 775831 4898819 Rsph17029_3675 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045537.1 775403 R 349101 CDS YP_001045538.1 126464425 4898820 776536..777030 1 NC_009050.1 KEGG: gox:GOX0533 hypothetical protein; hypothetical protein 777030 4898820 Rsph17029_3676 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045538.1 776536 D 349101 CDS YP_001045539.1 126464426 4898821 complement(777038..777931) 1 NC_009050.1 PFAM: protein of unknown function DUF305; KEGG: sde:Sde_1942 hypothetical protein; hypothetical protein 777931 4898821 Rsph17029_3677 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045539.1 777038 R 349101 CDS YP_001045540.1 126464427 4898484 complement(778009..782178) 1 NC_009050.1 PFAM: Cadherin; KEGG: ret:RHE_CH01374 hypothetical protein; cadherin 782178 4898484 Rsph17029_3678 Rhodobacter sphaeroides ATCC 17029 cadherin YP_001045540.1 778009 R 349101 CDS YP_001045541.1 126464428 4898485 complement(782257..783474) 1 NC_009050.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: sit:TM1040_0080 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 783474 4898485 Rsph17029_3679 Rhodobacter sphaeroides ATCC 17029 cobalamin synthesis protein, P47K YP_001045541.1 782257 R 349101 CDS YP_001045542.1 126464429 4898486 784478..785893 1 NC_009050.1 PFAM: sugar transferase; KEGG: ret:RHE_CH01359 putative sugar transferase involved in lipopolysaccharide synthesis, UDP-galactose-lipid carriertransferase protein; undecaprenyl-phosphate galactose phosphotransferase 785893 4898486 Rsph17029_3680 Rhodobacter sphaeroides ATCC 17029 undecaprenyl-phosphate galactose phosphotransferase YP_001045542.1 784478 D 349101 CDS YP_001045543.1 126464430 4898508 785939..786970 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rle:pRL90147 putative epimerase; NAD-dependent epimerase/dehydratase 786970 4898508 Rsph17029_3681 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001045543.1 785939 D 349101 CDS YP_001045544.1 126464431 4898509 787080..788951 1 NC_009050.1 KEGG: rle:pRL90148 hypothetical protein; hypothetical protein 788951 4898509 Rsph17029_3682 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045544.1 787080 D 349101 CDS YP_001045545.1 126464432 4898510 788999..790003 1 NC_009050.1 PFAM: glycosyl transferase, family 8; KEGG: bsu:BG10558 general stress protein A; glycosyl transferase family protein 790003 4898510 Rsph17029_3683 Rhodobacter sphaeroides ATCC 17029 glycosyl transferase family protein YP_001045545.1 788999 D 349101 CDS YP_001045546.1 126464433 4898822 790000..791472 1 NC_009050.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: nha:Nham_3039 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 791472 4898822 Rsph17029_3684 Rhodobacter sphaeroides ATCC 17029 polysaccharide biosynthesis protein YP_001045546.1 790000 D 349101 CDS YP_001045547.1 126464434 4898823 791832..792098 1 NC_009050.1 hypothetical protein 792098 4898823 Rsph17029_3685 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045547.1 791832 D 349101 CDS YP_001045548.1 126464435 4898824 792308..795508 1 NC_009050.1 SMART: Parallel beta-helix repeat; KEGG: rle:pRL90140 putative calcium-binding hemolysin-like protein; parallel beta-helix repeat-containing protein 795508 4898824 Rsph17029_3686 Rhodobacter sphaeroides ATCC 17029 parallel beta-helix repeat-containing protein YP_001045548.1 792308 D 349101 CDS YP_001045549.1 126464436 4898481 795799..796323 1 NC_009050.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mag:amb0106 acetyltransferase; hexapaptide repeat-containing transferase 796323 4898481 Rsph17029_3687 Rhodobacter sphaeroides ATCC 17029 hexapaptide repeat-containing transferase YP_001045549.1 795799 D 349101 CDS YP_001045550.1 126464437 4898482 796320..797339 1 NC_009050.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rle:pRL90151 putative GFO/IDH/MocA family oxidoreductase; oxidoreductase domain-containing protein 797339 4898482 Rsph17029_3688 Rhodobacter sphaeroides ATCC 17029 oxidoreductase domain-containing protein YP_001045550.1 796320 D 349101 CDS YP_001045551.1 126464438 4898483 797336..798466 1 NC_009050.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL90152 putative pleiotropic regulator; DegT/DnrJ/EryC1/StrS aminotransferase 798466 4898483 Rsph17029_3689 Rhodobacter sphaeroides ATCC 17029 DegT/DnrJ/EryC1/StrS aminotransferase YP_001045551.1 797336 D 349101 CDS YP_001045552.1 126464439 4898336 798463..799458 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: nha:Nham_3036 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 799458 4898336 Rsph17029_3690 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001045552.1 798463 D 349101 CDS YP_001045553.1 126464440 4898337 799455..800648 1 NC_009050.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ret:RHE_CH01368 probable aminotransferase protein (involved in cell wall biogenesis); DegT/DnrJ/EryC1/StrS aminotransferase 800648 4898337 Rsph17029_3691 Rhodobacter sphaeroides ATCC 17029 DegT/DnrJ/EryC1/StrS aminotransferase YP_001045553.1 799455 D 349101 CDS YP_001045554.1 126464441 4898338 complement(801005..803215) 1 NC_009050.1 PFAM: lipopolysaccharide biosynthesis; SMART: AAA ATPase; KEGG: rle:pRL90134 putative transmembrane polysaccaride biosynthesis protein; lipopolysaccharide biosynthesis protein 803215 4898338 Rsph17029_3692 Rhodobacter sphaeroides ATCC 17029 lipopolysaccharide biosynthesis protein YP_001045554.1 801005 R 349101 CDS YP_001045555.1 126464442 4898199 complement(803212..804327) 1 NC_009050.1 PFAM: glycosyl transferase, group 1; KEGG: ret:RHE_CH01352 probable glycosyltransferase protein; group 1 glycosyl transferase 804327 4898199 Rsph17029_3693 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001045555.1 803212 R 349101 CDS YP_001045556.1 126464443 4898200 complement(804317..805522) 1 NC_009050.1 PFAM: glycosyl transferase, group 1; KEGG: rle:pRL90136 putative glycosyl transferase; group 1 glycosyl transferase 805522 4898200 Rsph17029_3694 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001045556.1 804317 R 349101 CDS YP_001045557.1 126464444 4898347 complement(805519..806844) 1 NC_009050.1 PFAM: polysaccharide export protein; KEGG: mes:Meso_0652 polysaccharide export protein; polysaccharide export protein 806844 4898347 Rsph17029_3695 Rhodobacter sphaeroides ATCC 17029 polysaccharide export protein YP_001045557.1 805519 R 349101 CDS YP_001045558.1 126464445 4898348 807172..808425 1 NC_009050.1 PFAM: O-antigen polymerase; KEGG: rle:pRL90138 putative transmembrane exopolysaccharide production protein; O-antigen polymerase 808425 4898348 Rsph17029_3696 Rhodobacter sphaeroides ATCC 17029 O-antigen polymerase YP_001045558.1 807172 D 349101 CDS YP_001045559.1 126464446 4898349 808422..809201 1 NC_009050.1 TIGRFAM: methyltransferase FkbM family; KEGG: mpa:MAP0950c hypothetical protein; FkbM family methyltransferase 809201 4898349 Rsph17029_3697 Rhodobacter sphaeroides ATCC 17029 FkbM family methyltransferase YP_001045559.1 808422 D 349101 CDS YP_001045560.1 126464447 4898994 809400..810248 1 NC_009050.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: dge:Dgeo_2647 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 810248 4898994 Rsph17029_3698 Rhodobacter sphaeroides ATCC 17029 WecB/TagA/CpsF family glycosyl transferase YP_001045560.1 809400 D 349101 CDS YP_001045561.1 126464448 4898995 810245..811306 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rba:RB7482 CDP-tyvelose epimerase; NAD-dependent epimerase/dehydratase 811306 4898995 Rsph17029_3699 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001045561.1 810245 D 349101 CDS YP_001045562.1 126464449 4898996 811358..812566 1 NC_009050.1 PFAM: glycosyl transferase, group 1; KEGG: hne:HNE_1287 hypothetical protein; group 1 glycosyl transferase 812566 4898996 Rsph17029_3700 Rhodobacter sphaeroides ATCC 17029 group 1 glycosyl transferase YP_001045562.1 811358 D 349101 CDS YP_001045563.1 126464450 4898600 complement(812764..813525) 1 NC_009050.1 PFAM: regulatory protein, LuxR; KEGG: bmb:BruAb2_0786 transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 813525 4898600 Rsph17029_3701 Rhodobacter sphaeroides ATCC 17029 two component LuxR family transcriptional regulator YP_001045563.1 812764 R 349101 CDS YP_001045564.1 126464451 4898601 813886..814527 1 NC_009050.1 KEGG: ace:Acel_1935 acetyltransferase (the isoleucine patch superfamily); acetyltransferase 814527 4898601 Rsph17029_3702 Rhodobacter sphaeroides ATCC 17029 acetyltransferase YP_001045564.1 813886 D 349101 CDS YP_001045565.1 126464452 4898602 complement(814553..814975) 1 NC_009050.1 hypothetical protein 814975 4898602 Rsph17029_3703 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045565.1 814553 R 349101 CDS YP_001045566.1 126464453 4898151 815184..815621 1 NC_009050.1 PFAM: regulatory protein, MarR; KEGG: pde:Pden_2677 transcriptional regulator, MarR family; MarR family transcriptional regulator 815621 4898151 Rsph17029_3704 Rhodobacter sphaeroides ATCC 17029 MarR family transcriptional regulator YP_001045566.1 815184 D 349101 CDS YP_001045567.1 126464454 4898152 815618..817255 1 NC_009050.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00563 putative transport protein transmembrane; major facilitator transporter 817255 4898152 Rsph17029_3705 Rhodobacter sphaeroides ATCC 17029 major facilitator transporter YP_001045567.1 815618 D 349101 CDS YP_001045568.1 126464455 4898153 817252..818298 1 NC_009050.1 PFAM: secretion protein HlyD family protein; KEGG: pde:Pden_2675 secretion protein HlyD family protein; secretion protein HlyD family protein 818298 4898153 Rsph17029_3706 Rhodobacter sphaeroides ATCC 17029 secretion protein HlyD family protein YP_001045568.1 817252 D 349101 CDS YP_001045569.1 126464456 4898857 824783..825436 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3424 hypothetical protein; short-chain dehydrogenase/reductase SDR 825436 4898857 Rsph17029_3708 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045569.1 824783 D 349101 CDS YP_001045570.1 126464457 4898946 825961..826302 1 NC_009050.1 PFAM: IS66 Orf2 family protein; KEGG: rsp:RSP_4156 transposase, IS66 Orf2; IS66 Orf2 family protein 826302 4898946 Rsph17029_3710 Rhodobacter sphaeroides ATCC 17029 IS66 Orf2 family protein YP_001045570.1 825961 D 349101 CDS YP_001045571.1 126464458 4898948 828105..830114 1 NC_009050.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_0101 radical SAM; radical SAM domain-containing protein 830114 4898948 Rsph17029_3713 Rhodobacter sphaeroides ATCC 17029 radical SAM domain-containing protein YP_001045571.1 828105 D 349101 CDS YP_001045572.1 126464459 4898869 830101..832053 1 NC_009050.1 PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: xcv:XCV0270 putative aminopeptidase precursor; peptidase S9 prolyl oligopeptidase 832053 4898869 Rsph17029_3714 Rhodobacter sphaeroides ATCC 17029 peptidase S9 prolyl oligopeptidase YP_001045572.1 830101 D 349101 CDS YP_001045573.1 126464460 4898870 complement(832054..832698) 1 NC_009050.1 PFAM: nitroreductase; KEGG: tko:TK0840 NAD(P)H-flavin oxidoreductase; nitroreductase 832698 4898870 Rsph17029_3715 Rhodobacter sphaeroides ATCC 17029 nitroreductase YP_001045573.1 832054 R 349101 CDS YP_001045574.1 126464461 4898871 complement(832839..834155) 1 NC_009050.1 TIGRFAM: uncharacterized domain; PFAM: protein of unknown function DUF181; KEGG: sat:SYN_00274 fatty acid binding protein; hypothetical protein 834155 4898871 Rsph17029_3716 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045574.1 832839 R 349101 CDS YP_001045575.1 126464462 4898938 complement(834146..835207) 1 NC_009050.1 KEGG: pde:Pden_4197 UBA/ThiF-type NAD/FAD binding protein; hypothetical protein 835207 4898938 Rsph17029_3717 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045575.1 834146 R 349101 CDS YP_001045576.1 126464463 4898939 complement(835289..835495) 1 NC_009050.1 hypothetical protein 835495 4898939 Rsph17029_3718 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045576.1 835289 R 349101 CDS YP_001045577.1 126464464 4899041 complement(835839..836099) 1 NC_009050.1 hypothetical protein 836099 4899041 Rsph17029_3719 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045577.1 835839 R 349101 CDS YP_001045578.1 126464465 4899042 complement(836135..837169) 1 NC_009050.1 PFAM: Radical SAM domain protein; KEGG: mca:MCA0891 hypothetical protein; radical SAM domain-containing protein 837169 4899042 Rsph17029_3720 Rhodobacter sphaeroides ATCC 17029 radical SAM domain-containing protein YP_001045578.1 836135 R 349101 CDS YP_001045579.1 126464466 4899043 complement(838293..838709) 1 NC_009050.1 PFAM: DNA repair protein RadC; KEGG: rde:RD1_3690 DNA repair protein RadC; DNA repair protein RadC 838709 4899043 Rsph17029_3721 Rhodobacter sphaeroides ATCC 17029 DNA repair protein RadC YP_001045579.1 838293 R 349101 CDS YP_001045580.1 126464467 4898463 838725..838994 1 NC_009050.1 PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_B2715 protein of unknown function DUF1330; hypothetical protein 838994 4898463 Rsph17029_3722 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045580.1 838725 D 349101 CDS YP_001045581.1 126464468 4898464 839006..840115 1 NC_009050.1 PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rde:RD1_3542 ATP-dependent DNA helicase, UvrD/REP family domain; DEAD/DEAH box helicase 840115 4898464 Rsph17029_3723 Rhodobacter sphaeroides ATCC 17029 DEAD/DEAH box helicase YP_001045581.1 839006 D 349101 CDS YP_001045582.1 126464469 4898465 complement(840470..841342) 1 NC_009050.1 KEGG: tfu:Tfu_0899 similar to V8-like Glu-specific endopeptidase; hypothetical protein 841342 4898465 Rsph17029_3724 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045582.1 840470 R 349101 CDS YP_001045583.1 126464470 4898771 842152..843069 1 NC_009050.1 hypothetical protein 843069 4898771 Rsph17029_3725 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045583.1 842152 D 349101 CDS YP_001045584.1 126464471 4898772 843501..844673 1 NC_009050.1 PFAM: transposase, IS4 family protein; KEGG: pde:Pden_2404 hypothetical protein; transposase, IS4 family protein 844673 4898772 Rsph17029_3726 Rhodobacter sphaeroides ATCC 17029 transposase, IS4 family protein YP_001045584.1 843501 D 349101 CDS YP_001045585.1 126464472 4898773 complement(844853..845977) 1 NC_009050.1 KEGG: gox:GOX2571 hypothetical protein; hypothetical protein 845977 4898773 Rsph17029_3727 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045585.1 844853 R 349101 CDS YP_001045586.1 126464473 4898805 complement(846327..849203) 1 NC_009050.1 KEGG: cpf:CPF_1497 ATPase domain protein; HSP90 family molecular chaperone-like protein 849203 4898805 Rsph17029_3728 Rhodobacter sphaeroides ATCC 17029 HSP90 family molecular chaperone-like protein YP_001045586.1 846327 R 349101 CDS YP_001045587.1 126464474 4898806 850422..850787 1 NC_009050.1 KEGG: rde:RD1_C0006 mobilization protein; mobilization protein 850787 4898806 Rsph17029_3729 Rhodobacter sphaeroides ATCC 17029 mobilization protein YP_001045587.1 850422 D 349101 CDS YP_001045588.1 126464475 4898807 851104..852393 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: bca:BCE_1587 sensor histidine kinase; histidine kinase 852393 4898807 Rsph17029_3730 Rhodobacter sphaeroides ATCC 17029 histidine kinase YP_001045588.1 851104 D 349101 CDS YP_001045589.1 126464476 4898324 852399..853253 1 NC_009050.1 hypothetical protein 853253 4898324 Rsph17029_3731 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045589.1 852399 D 349101 CDS YP_001045590.1 126464477 4898325 853253..853873 1 NC_009050.1 hypothetical protein 853873 4898325 Rsph17029_3732 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045590.1 853253 D 349101 CDS YP_001045591.1 126464478 4898326 853943..854989 1 NC_009050.1 PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 854989 4898326 Rsph17029_3733 Rhodobacter sphaeroides ATCC 17029 integrase catalytic subunit YP_001045591.1 853943 D 349101 CDS YP_001045592.1 126464479 4898841 complement(858751..859203) 1 NC_009050.1 KEGG: nwi:Nwi_0831 phage integrase; hypothetical protein 859203 4898841 Rsph17029_3737 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045592.1 858751 R 349101 CDS YP_001045593.1 126464480 4898248 859500..859817 1 NC_009050.1 KEGG: sil:SPOA0091 IS3 family transposase orfA; hypothetical protein 859817 4898248 Rsph17029_3738 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045593.1 859500 D 349101 CDS YP_001045594.1 126464481 4898929 complement(860933..861685) 1 NC_009050.1 PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_3014 putative aldolase protein; HpcH/HpaI aldolase 861685 4898929 Rsph17029_3740 Rhodobacter sphaeroides ATCC 17029 HpcH/HpaI aldolase YP_001045594.1 860933 R 349101 CDS YP_001045595.1 126464482 4898503 complement(861685..862605) 1 NC_009050.1 PFAM: protein of unknown function DUF849; KEGG: rsp:RSP_3015 hypothetical protein; hypothetical protein 862605 4898503 Rsph17029_3741 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045595.1 861685 R 349101 CDS YP_001045596.1 126464483 4898504 complement(862663..863526) 1 NC_009050.1 KEGG: rsp:RSP_3016 possible phenol degradation enzyme; putative phenol degradation enzyme 863526 4898504 Rsph17029_3742 Rhodobacter sphaeroides ATCC 17029 putative phenol degradation enzyme YP_001045596.1 862663 R 349101 CDS YP_001045597.1 126464484 4898634 complement(863563..864081) 1 NC_009050.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: rsp:RSP_3017 nitrilotriacetate monooxygenase; flavin reductase domain-containing protein 864081 4898634 Rsph17029_3743 Rhodobacter sphaeroides ATCC 17029 flavin reductase domain-containing protein YP_001045597.1 863563 R 349101 CDS YP_001045598.1 126464485 4898635 complement(864155..865327) 1 NC_009050.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_3018 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 865327 4898635 Rsph17029_3744 Rhodobacter sphaeroides ATCC 17029 acyl-CoA dehydrogenase type 2 YP_001045598.1 864155 R 349101 CDS YP_001045599.1 126464486 4898636 complement(865351..866025) 1 NC_009050.1 KEGG: rsp:RSP_3019 putative hydrolase; putative hydrolase 866025 4898636 Rsph17029_3745 Rhodobacter sphaeroides ATCC 17029 putative hydrolase YP_001045599.1 865351 R 349101 CDS YP_001045600.1 126464487 4898654 complement(866022..866492) 1 NC_009050.1 KEGG: rsp:RSP_3020 hypothetical protein; hypothetical protein 866492 4898654 Rsph17029_3746 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045600.1 866022 R 349101 CDS YP_001045601.1 126464488 4898655 complement(866489..867403) 1 NC_009050.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3021 putative catechol 2,3-dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 867403 4898655 Rsph17029_3747 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001045601.1 866489 R 349101 CDS YP_001045602.1 126464489 4898656 867761..868588 1 NC_009050.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3022 transcriptional regulator, TetR family; TetR family transcriptional regulator 868588 4898656 Rsph17029_3748 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001045602.1 867761 D 349101 CDS YP_001045603.1 126464490 4899162 complement(868590..869495) 1 NC_009050.1 KEGG: rsp:RSP_3023 hypothetical protein; hypothetical protein 869495 4899162 Rsph17029_3749 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045603.1 868590 R 349101 CDS YP_001045604.1 126464491 4899163 869647..870246 1 NC_009050.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rsp:RSP_3025 possible NAD(P)H oxidoreductase; NAD(P)H dehydrogenase (quinone) 870246 4899163 Rsph17029_3750 Rhodobacter sphaeroides ATCC 17029 NAD(P)H dehydrogenase (quinone) YP_001045604.1 869647 D 349101 CDS YP_001045605.1 126464492 4899164 complement(870219..871055) 1 NC_009050.1 activator of 3-phenylpropionic acid catabolism; DNA-binding transcriptional activator MhpR 871055 4899164 Rsph17029_3751 Rhodobacter sphaeroides ATCC 17029 DNA-binding transcriptional activator MhpR YP_001045605.1 870219 R 349101 CDS YP_001045606.1 126464493 4898930 complement(871575..872945) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rsp:RSP_3026 transcriptional regulator, MocR family; GntR family transcriptional regulator 872945 4898930 Rsph17029_3753 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045606.1 871575 R 349101 CDS YP_001045607.1 126464494 4898542 complement(873073..874482) 1 NC_009050.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_3027 RdxA, iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 874482 4898542 Rsph17029_3754 Rhodobacter sphaeroides ATCC 17029 4Fe-4S ferredoxin YP_001045607.1 873073 R 349101 CDS YP_001045608.1 126464495 4898543 874886..876109 1 NC_009050.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 876109 4898543 Rsph17029_3755 Rhodobacter sphaeroides ATCC 17029 5-aminolevulinate synthase YP_001045608.1 874886 D 349101 CDS YP_001045609.1 126464496 4898403 complement(876482..877213) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3029 transcriptional regulator, GntR family; GntR family transcriptional regulator 877213 4898403 Rsph17029_3756 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045609.1 876482 R 349101 CDS YP_001045610.1 126464497 4898404 877303..878301 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3030 ABC peptide/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 878301 4898404 Rsph17029_3757 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045610.1 877303 D 349101 CDS YP_001045611.1 126464498 4898405 878303..879196 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3031 ABC peptide/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 879196 4898405 Rsph17029_3758 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045611.1 878303 D 349101 CDS YP_001045612.1 126464499 4898309 879193..880164 1 NC_009050.1 KEGG: rsp:RSP_3032 ABC peptide/opine transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 880164 4898309 Rsph17029_3759 Rhodobacter sphaeroides ATCC 17029 oligopeptide/dipeptide ABC transporter ATPase YP_001045612.1 879193 D 349101 CDS YP_001045613.1 126464500 4898310 880161..881162 1 NC_009050.1 KEGG: rsp:RSP_3033 ABC peptide/opine transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 881162 4898310 Rsph17029_3760 Rhodobacter sphaeroides ATCC 17029 oligopeptide/dipeptide ABC transporter ATPase YP_001045613.1 880161 D 349101 CDS YP_001045614.1 126464501 4898311 881200..882759 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3034 ABC peptide/opine transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 882759 4898311 Rsph17029_3761 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045614.1 881200 D 349101 CDS YP_001045615.1 126464502 4898660 882881..884158 1 NC_009050.1 PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: rsp:RSP_3035 putative transporter, major facilitator superfamily (MFS); major facilitator transporter 884158 4898660 Rsph17029_3762 Rhodobacter sphaeroides ATCC 17029 major facilitator transporter YP_001045615.1 882881 D 349101 CDS YP_001045616.1 126464503 4898661 884197..886200 1 NC_009050.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: rsp:RSP_3036 hypothetical protein; peptidase S15 886200 4898661 Rsph17029_3763 Rhodobacter sphaeroides ATCC 17029 peptidase S15 YP_001045616.1 884197 D 349101 CDS YP_001045617.1 126464504 4898750 complement(886344..887102) 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3037 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 887102 4898750 Rsph17029_3764 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045617.1 886344 R 349101 CDS YP_001045618.1 126464505 4898751 complement(887123..887926) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3038 ABC permidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 887926 4898751 Rsph17029_3765 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045618.1 887123 R 349101 CDS YP_001045619.1 126464506 4898752 complement(887935..888786) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3039 ABC permidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 888786 4898752 Rsph17029_3766 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045619.1 887935 R 349101 CDS YP_001045620.1 126464507 4898861 complement(888799..889956) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3040 ABC permidine/putrescine transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 889956 4898861 Rsph17029_3767 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045620.1 888799 R 349101 CDS YP_001045621.1 126464508 4898862 complement(890016..891113) 1 NC_009050.1 KEGG: rsp:RSP_3041 ABC permidine/putrescine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 891113 4898862 Rsph17029_3768 Rhodobacter sphaeroides ATCC 17029 spermidine/putrescine ABC transporter ATPase YP_001045621.1 890016 R 349101 CDS YP_001045622.1 126464509 4898863 891189..891962 1 NC_009050.1 PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_3042 DMSO reductase regulatory protein DorX; regulatory protein LuxR 891962 4898863 Rsph17029_3769 Rhodobacter sphaeroides ATCC 17029 regulatory protein LuxR YP_001045622.1 891189 D 349101 CDS YP_001045623.1 126464510 4898931 893902..895269 1 NC_009050.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: rsp:RSP_3044 DMSO/TMAO-sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 895269 4898931 Rsph17029_3771 Rhodobacter sphaeroides ATCC 17029 Hpt sensor hybrid histidine kinase YP_001045623.1 893902 D 349101 CDS YP_001045624.1 126464511 4898829 complement(895287..895985) 1 NC_009050.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3045 DMSO/TMAO-two component transcriptional regulator, winged helix family; two component transcriptional regulator 895985 4898829 Rsph17029_3772 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001045624.1 895287 R 349101 CDS YP_001045625.1 126464512 4898830 896255..897433 1 NC_009050.1 TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: rsp:RSP_3046 DMSO/TMAO pentaheme cytochrome c subunit; trimethylamine-N-oxide reductase c-type cytochrome TorC 897433 4898830 Rsph17029_3773 Rhodobacter sphaeroides ATCC 17029 trimethylamine-N-oxide reductase c-type cytochrome TorC YP_001045625.1 896255 D 349101 CDS YP_001045626.1 126464513 4898898 897430..898110 1 NC_009050.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: rsp:RSP_3047 DMSO-membrane protein; cytoplasmic chaperone TorD family protein 898110 4898898 Rsph17029_3774 Rhodobacter sphaeroides ATCC 17029 cytoplasmic chaperone TorD family protein YP_001045626.1 897430 D 349101 CDS YP_001045627.1 126464514 4898899 898107..900575 1 NC_009050.1 KEGG: rsp:RSP_3048 DMSO/TMAO-reductase; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductases 900575 4898899 Rsph17029_3775 Rhodobacter sphaeroides ATCC 17029 molybdopterin guanine dinucleotide-containing S/N-oxide reductases YP_001045627.1 898107 D 349101 CDS YP_001045628.1 126464515 4898900 900706..901938 1 NC_009050.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: rsp:RSP_3049 molybdenum cofactor biosynthesis protein; molybdenum cofactor synthesis domain-containing protein 901938 4898900 Rsph17029_3776 Rhodobacter sphaeroides ATCC 17029 molybdenum cofactor synthesis domain-containing protein YP_001045628.1 900706 D 349101 CDS YP_001045629.1 126464516 4898583 901995..903011 1 NC_009050.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 903011 4898583 Rsph17029_3777 Rhodobacter sphaeroides ATCC 17029 molybdenum cofactor biosynthesis protein A YP_001045629.1 901995 D 349101 CDS YP_001045630.1 126464517 4898584 903191..905170 1 NC_009050.1 PFAM: protein of unknown function DUF839; KEGG: rsp:RSP_3051 putative phosphatase; hypothetical protein 905170 4898584 Rsph17029_3778 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045630.1 903191 D 349101 CDS YP_001045631.1 126464518 4898585 complement(905466..906344) 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3052 transcriptional regulator, LysR family; LysR family transcriptional regulator 906344 4898585 Rsph17029_3779 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001045631.1 905466 R 349101 CDS YP_001045632.1 126464519 4898571 906505..907434 1 NC_009050.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3053 possible dioxygenase/glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 907434 4898571 Rsph17029_3780 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001045632.1 906505 D 349101 CDS YP_001045633.1 126464520 4898572 907770..908387 1 NC_009050.1 PFAM: phospholipase/Carboxylesterase; KEGG: rsp:RSP_3054 hypothetical protein; phospholipase/carboxylesterase 908387 4898572 Rsph17029_3781 Rhodobacter sphaeroides ATCC 17029 phospholipase/carboxylesterase YP_001045633.1 907770 D 349101 CDS YP_001045634.1 126464521 4898573 complement(908502..908786) 1 NC_009050.1 PFAM: SH3, type 3 domain protein; KEGG: rsp:RSP_6161 hypothetical protein; SH3 type 3 domain-containing protein 908786 4898573 Rsph17029_3782 Rhodobacter sphaeroides ATCC 17029 SH3 type 3 domain-containing protein YP_001045634.1 908502 R 349101 CDS YP_001045635.1 126464522 4899185 909016..909486 1 NC_009050.1 PFAM: regulatory protein, MarR; KEGG: rsp:RSP_3055 transcriptional regulator, MarR family; MarR family transcriptional regulator 909486 4899185 Rsph17029_3783 Rhodobacter sphaeroides ATCC 17029 MarR family transcriptional regulator YP_001045635.1 909016 D 349101 CDS YP_001045636.1 126464523 4899186 complement(909513..911447) 1 NC_009050.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_3056 TonB dependent-iron siderophore receptor; TonB-dependent receptor 911447 4899186 Rsph17029_3784 Rhodobacter sphaeroides ATCC 17029 TonB-dependent receptor YP_001045636.1 909513 R 349101 CDS YP_001045637.1 126464524 4898665 complement(911950..913041) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3057 ABC proline/glycine betaine transporter, ATPase subunit; ABC transporter 913041 4898665 Rsph17029_3785 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045637.1 911950 R 349101 CDS YP_001045638.1 126464525 4898666 complement(913034..913945) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3058 ABC proline/glycine betaine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 913945 4898666 Rsph17029_3786 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045638.1 913034 R 349101 CDS YP_001045639.1 126464526 4898667 complement(914013..915014) 1 NC_009050.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rsp:RSP_3059 ABC proline/glycine betaine transporter, periplasmic substrate-binding protein; substrate-binding region of ABC-type glycine betaine transport system 915014 4898667 Rsph17029_3787 Rhodobacter sphaeroides ATCC 17029 substrate-binding region of ABC-type glycine betaine transport system YP_001045639.1 914013 R 349101 CDS YP_001045640.1 126464527 4899006 915892..916548 1 NC_009050.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rsp:RSP_3060 possible O-acetylserine synthase; hexapaptide repeat-containing transferase 916548 4899006 Rsph17029_3788 Rhodobacter sphaeroides ATCC 17029 hexapaptide repeat-containing transferase YP_001045640.1 915892 D 349101 CDS YP_001045641.1 126464528 4899007 916575..916886 1 NC_009050.1 KEGG: rsp:RSP_3061 hypothetical protein; hypothetical protein 916886 4899007 Rsph17029_3789 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045641.1 916575 D 349101 CDS YP_001045642.1 126464529 4899008 916883..917578 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3062 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 917578 4899008 Rsph17029_3790 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045642.1 916883 D 349101 CDS YP_001045643.1 126464530 4899003 917580..918920 1 NC_009050.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_3063 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 918920 4899003 Rsph17029_3791 Rhodobacter sphaeroides ATCC 17029 AMP-dependent synthetase and ligase YP_001045643.1 917580 D 349101 CDS YP_001045644.1 126464531 4899004 919053..919835 1 NC_009050.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_3064 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 919835 4899004 Rsph17029_3792 Rhodobacter sphaeroides ATCC 17029 DeoR family transcriptional regulator YP_001045644.1 919053 D 349101 CDS YP_001045645.1 126464532 4899005 920092..921225 1 NC_009050.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_3065 putative transporter, major facilitator superfamily (MFS); major facilitator transporter 921225 4899005 Rsph17029_3793 Rhodobacter sphaeroides ATCC 17029 major facilitator transporter YP_001045645.1 920092 D 349101 CDS YP_001045646.1 126464533 4899093 921364..922656 1 NC_009050.1 KEGG: rsp:RSP_3067 hypothetical protein; hypothetical protein 922656 4899093 Rsph17029_3794 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045646.1 921364 D 349101 CDS YP_001045647.1 126464534 4899094 922653..923375 1 NC_009050.1 KEGG: rsp:RSP_3068 hypothetical protein; hypothetical protein 923375 4899094 Rsph17029_3795 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045647.1 922653 D 349101 CDS YP_001045648.1 126464535 4899095 complement(923673..924230) 1 NC_009050.1 PFAM: NADPH-dependent FMN reductase; KEGG: rsp:RSP_3069 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 924230 4899095 Rsph17029_3796 Rhodobacter sphaeroides ATCC 17029 NADPH-dependent FMN reductase YP_001045648.1 923673 R 349101 CDS YP_001045649.1 126464536 4898262 924632..925903 1 NC_009050.1 PFAM: MOFRL domain protein; KEGG: rsp:RSP_3071 putative hydroxypyruvate reductase/glycerate kinase; hydroxypyruvate reductase 925903 4898262 Rsph17029_3797 Rhodobacter sphaeroides ATCC 17029 hydroxypyruvate reductase YP_001045649.1 924632 D 349101 CDS YP_001045650.1 126464537 4898263 complement(925872..926906) 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: rsp:RSP_3070 hypothetical protein; NAD-dependent epimerase/dehydratase 926906 4898263 Rsph17029_3798 Rhodobacter sphaeroides ATCC 17029 NAD-dependent epimerase/dehydratase YP_001045650.1 925872 R 349101 CDS YP_001045651.1 126464538 4898264 complement(927145..928434) 1 NC_009050.1 KEGG: rsp:RSP_3072 putative L-sorbosone dehydrogenase; putative L-sorbosone dehydrogenase 928434 4898264 Rsph17029_3799 Rhodobacter sphaeroides ATCC 17029 putative L-sorbosone dehydrogenase YP_001045651.1 927145 R 349101 CDS YP_001045652.1 126464539 4898436 928811..929362 1 NC_009050.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_3073 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 929362 4898436 Rsph17029_3800 Rhodobacter sphaeroides ATCC 17029 ErfK/YbiS/YcfS/YnhG family protein YP_001045652.1 928811 D 349101 CDS YP_001045653.1 126464540 4898437 complement(929669..931507) 1 NC_009050.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 931507 4898437 Rsph17029_3801 Rhodobacter sphaeroides ATCC 17029 dihydroxy-acid dehydratase YP_001045653.1 929669 R 349101 CDS YP_001045654.1 126464541 4898438 931746..932993 1 NC_009050.1 PFAM: protein of unknown function DUF323; KEGG: rsp:RSP_3075 hypothetical protein; hypothetical protein 932993 4898438 Rsph17029_3802 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045654.1 931746 D 349101 CDS YP_001045655.1 126464542 4898415 932993..933925 1 NC_009050.1 KEGG: rsp:RSP_3076 hypothetical protein; hypothetical protein 933925 4898415 Rsph17029_3803 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045655.1 932993 D 349101 CDS YP_001045656.1 126464543 4898416 complement(934056..935582) 1 NC_009050.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rsp:RSP_3077 hypothetical protein; deoxyribodipyrimidine photolyase-like protein 935582 4898416 Rsph17029_3804 Rhodobacter sphaeroides ATCC 17029 deoxyribodipyrimidine photolyase-like protein YP_001045656.1 934056 R 349101 CDS YP_001045657.1 126464544 4898668 complement(935687..935971) 1 NC_009050.1 KEGG: rsp:RSP_3078 hypothetical protein; hypothetical protein 935971 4898668 Rsph17029_3805 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045657.1 935687 R 349101 CDS YP_001045658.1 126464545 4898669 936099..936992 1 NC_009050.1 PFAM: periplasmic binding protein; KEGG: rsp:RSP_3079 ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; periplasmic binding protein 936992 4898669 Rsph17029_3806 Rhodobacter sphaeroides ATCC 17029 periplasmic binding protein YP_001045658.1 936099 D 349101 CDS YP_001045659.1 126464546 4898670 complement(937048..938703) 1 NC_009050.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: rsp:RSP_3080 choline/carnitine/betaine transporter, BCCT family; choline/carnitine/betaine transporter 938703 4898670 Rsph17029_3807 Rhodobacter sphaeroides ATCC 17029 choline/carnitine/betaine transporter YP_001045659.1 937048 R 349101 CDS YP_001045660.1 126464547 4898559 complement(939217..940920) 1 NC_009050.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3081 ABC multidrug efflux transporter, fused ATPase and inner membrane subunits; ABC transporter 940920 4898559 Rsph17029_3808 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045660.1 939217 R 349101 CDS YP_001045661.1 126464548 4898560 941490..941837 1 NC_009050.1 KEGG: rsp:RSP_3082 hypothetical protein; hypothetical protein 941837 4898560 Rsph17029_3809 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045661.1 941490 D 349101 CDS YP_001045662.1 126464549 4898561 complement(941938..943623) 1 NC_009050.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3083 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 943623 4898561 Rsph17029_3810 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001045662.1 941938 R 349101 CDS YP_001045663.1 126464550 4899132 complement(943637..944323) 1 NC_009050.1 KEGG: rsp:RSP_3084 hypothetical protein; hypothetical protein 944323 4899132 Rsph17029_3811 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045663.1 943637 R 349101 CDS YP_001045664.1 126464551 4899133 944619..946268 1 NC_009050.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: rsp:RSP_3085 hypothetical protein; sulfatase 946268 4899133 Rsph17029_3812 Rhodobacter sphaeroides ATCC 17029 sulfatase YP_001045664.1 944619 D 349101 CDS YP_001045665.1 126464552 4899134 946279..946659 1 NC_009050.1 PFAM: diacylglycerol kinase; KEGG: rsp:RSP_3087 diacylglycerol kinase; diacylglycerol kinase 946659 4899134 Rsph17029_3813 Rhodobacter sphaeroides ATCC 17029 diacylglycerol kinase YP_001045665.1 946279 D 349101 CDS YP_001045666.1 126464553 4898969 complement(946641..947957) 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3086 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 947957 4898969 Rsph17029_3814 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001045666.1 946641 R 349101 CDS YP_001045667.1 126464554 4898970 complement(947954..948613) 1 NC_009050.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3088 two component transcriptional regulator, winged helix family; two component transcriptional regulator 948613 4898970 Rsph17029_3815 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001045667.1 947954 R 349101 CDS YP_001045668.1 126464555 4898971 complement(948908..949300) 1 NC_009050.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_3089 hypothetical protein; glutathione-dependent formaldehyde-activating protein 949300 4898971 Rsph17029_3816 Rhodobacter sphaeroides ATCC 17029 glutathione-dependent formaldehyde-activating protein YP_001045668.1 948908 R 349101 CDS YP_001045669.1 126464556 4898544 949713..950051 1 NC_009050.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein-like; KEGG: rsp:RSP_3090 putative alkylphosphonate uptake protein, PhnA; alkylphosphonate utilization operon protein PhnA 950051 4898544 Rsph17029_3817 Rhodobacter sphaeroides ATCC 17029 alkylphosphonate utilization operon protein PhnA YP_001045669.1 949713 D 349101 CDS YP_001045670.1 126464557 4898545 complement(950110..950706) 1 NC_009050.1 KEGG: rsp:RSP_3091 conserved hypothetical protein; hypothetical protein 950706 4898545 Rsph17029_3818 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045670.1 950110 R 349101 CDS YP_001045671.1 126464558 4898546 complement(950937..951515) 1 NC_009050.1 KEGG: rsp:RSP_3092 hypothetical protein; hypothetical protein 951515 4898546 Rsph17029_3819 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045671.1 950937 R 349101 CDS YP_001045672.1 126464559 4898586 complement(951540..952253) 1 NC_009050.1 PFAM: protein of unknown function UPF0005; KEGG: rsp:RSP_3093 predicted integral membrane protein; hypothetical protein 952253 4898586 Rsph17029_3820 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045672.1 951540 R 349101 CDS YP_001045673.1 126464560 4898587 complement(952282..953049) 1 NC_009050.1 KEGG: rsp:RSP_3094 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 953049 4898587 Rsph17029_3821 Rhodobacter sphaeroides ATCC 17029 putative transmembrane anti-sigma factor YP_001045673.1 952282 R 349101 CDS YP_001045674.1 126464561 4898588 complement(953042..953572) 1 NC_009050.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; RNA polymerase sigma factor 953572 4898588 Rsph17029_3822 Rhodobacter sphaeroides ATCC 17029 RNA polymerase sigma factor YP_001045674.1 953042 R 349101 CDS YP_001045675.1 126464562 4898907 complement(953638..953946) 1 NC_009050.1 KEGG: rsp:RSP_3096 hypothetical protein; hypothetical protein 953946 4898907 Rsph17029_3823 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045675.1 953638 R 349101 CDS YP_001045676.1 126464563 4898908 complement(953943..956420) 1 NC_009050.1 PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_3097 QoxA, quinol oxidase subunit I; cytochrome-c oxidase 956420 4898908 Rsph17029_3824 Rhodobacter sphaeroides ATCC 17029 cytochrome-c oxidase YP_001045676.1 953943 R 349101 CDS YP_001045677.1 126464564 4898707 complement(956417..956986) 1 NC_009050.1 PFAM: cytochrome c oxidase, subunit II; KEGG: rsp:RSP_3098 QoxB, quinol oxidase subunit II; cytochrome c oxidase, subunit II 956986 4898707 Rsph17029_3825 Rhodobacter sphaeroides ATCC 17029 cytochrome c oxidase, subunit II YP_001045677.1 956417 R 349101 CDS YP_001045678.1 126464565 4898708 957089..957604 1 NC_009050.1 KEGG: rpb:RPB_0157 hypothetical protein; hypothetical protein 957604 4898708 Rsph17029_3826 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045678.1 957089 D 349101 CDS YP_001045679.1 126464566 4898709 complement(957574..958086) 1 NC_009050.1 KEGG: rsp:RSP_3100 hypothetical protein; hypothetical protein 958086 4898709 Rsph17029_3827 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045679.1 957574 R 349101 CDS YP_001045680.1 126464567 4898617 complement(958224..960542) 1 NC_009050.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE4 domain protein; KEGG: rsp:RSP_3101 periplasmic sensor diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 960542 4898617 Rsph17029_3828 Rhodobacter sphaeroides ATCC 17029 diguanylate cyclase/phosphodiesterase YP_001045680.1 958224 R 349101 CDS YP_001045681.1 126464568 4898618 complement(960633..960908) 1 NC_009050.1 hypothetical protein 960908 4898618 Rsph17029_3829 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045681.1 960633 R 349101 CDS YP_001045682.1 126464569 4898619 complement(961011..961202) 1 NC_009050.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rsp:RSP_3102 putative sec-independent protein translocase protein, TatE; sec-independent translocation protein mttA/Hcf106 961202 4898619 Rsph17029_3830 Rhodobacter sphaeroides ATCC 17029 sec-independent translocation protein mttA/Hcf106 YP_001045682.1 961011 R 349101 CDS YP_001045683.1 126464570 4898265 complement(961257..961634) 1 NC_009050.1 hypothetical protein 961634 4898265 Rsph17029_3831 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045683.1 961257 R 349101 CDS YP_001045684.1 126464571 4898266 961769..962407 1 NC_009050.1 PFAM: cyclase/dehydrase; KEGG: rsp:RSP_3103 hypothetical protein; cyclase/dehydrase 962407 4898266 Rsph17029_3832 Rhodobacter sphaeroides ATCC 17029 cyclase/dehydrase YP_001045684.1 961769 D 349101 CDS YP_001045685.1 126464572 4898267 962411..963595 1 NC_009050.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_3104 putative glutathione-dependent formaldehyde dehydrogenase; alcohol dehydrogenase 963595 4898267 Rsph17029_3833 Rhodobacter sphaeroides ATCC 17029 alcohol dehydrogenase YP_001045685.1 962411 D 349101 CDS YP_001045686.1 126464573 4898646 complement(963624..965810) 1 NC_009050.1 KEGG: rsp:RSP_3105 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase 965810 4898646 Rsph17029_3834 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase YP_001045686.1 963624 R 349101 CDS YP_001045687.1 126464574 4898647 complement(965963..966925) 1 NC_009050.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rsp:RSP_3106 cation efflux transporter, CDF family; cation diffusion facilitator family transporter 966925 4898647 Rsph17029_3835 Rhodobacter sphaeroides ATCC 17029 cation diffusion facilitator family transporter YP_001045687.1 965963 R 349101 CDS YP_001045688.1 126464575 4898648 complement(966933..967205) 1 NC_009050.1 PFAM: protein of unknown function DUF156; KEGG: rsp:RSP_3107 hypothetical protein; hypothetical protein 967205 4898648 Rsph17029_3836 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045688.1 966933 R 349101 CDS YP_001045689.1 126464576 4899063 complement(967660..969348) 1 NC_009050.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3108 putative methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 969348 4899063 Rsph17029_3837 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001045689.1 967660 R 349101 CDS YP_001045690.1 126464577 4899064 complement(969501..969965) 1 NC_009050.1 PFAM: regulatory protein, MarR; KEGG: rsp:RSP_3109 transcriptional regulator, MarR family; MarR family transcriptional regulator 969965 4899064 Rsph17029_3838 Rhodobacter sphaeroides ATCC 17029 MarR family transcriptional regulator YP_001045690.1 969501 R 349101 CDS YP_001045691.1 126464578 4899065 970028..970708 1 NC_009050.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_3110 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 970708 4899065 Rsph17029_3839 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase domain-containing protein YP_001045691.1 970028 D 349101 CDS YP_001045692.1 126464579 4898106 970740..971438 1 NC_009050.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_3111 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 971438 4898106 Rsph17029_3840 Rhodobacter sphaeroides ATCC 17029 glutathione S-transferase domain-containing protein YP_001045692.1 970740 D 349101 CDS YP_001045693.1 126464580 4898107 971449..971925 1 NC_009050.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rsp:RSP_3112 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 971925 4898107 Rsph17029_3841 Rhodobacter sphaeroides ATCC 17029 3-demethylubiquinone-9 3-methyltransferase YP_001045693.1 971449 D 349101 CDS YP_001045694.1 126464581 4898108 complement(972051..973361) 1 NC_009050.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 973361 4898108 Rsph17029_3842 Rhodobacter sphaeroides ATCC 17029 D-amino acid dehydrogenase small subunit YP_001045694.1 972051 R 349101 CDS YP_001045695.1 126464582 4898864 complement(973842..974921) 1 NC_009050.1 KEGG: rsp:RSP_3114 hypothetical protein; hypothetical protein 974921 4898864 Rsph17029_3843 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045695.1 973842 R 349101 CDS YP_001045696.1 126464583 4898865 complement(975051..975305) 1 NC_009050.1 PFAM: Transglycosylase-associated protein; KEGG: rsp:RSP_3115 hypothetical protein; transglycosylase-associated protein 975305 4898865 Rsph17029_3844 Rhodobacter sphaeroides ATCC 17029 transglycosylase-associated protein YP_001045696.1 975051 R 349101 CDS YP_001045697.1 126464584 4898574 complement(975363..976583) 1 NC_009050.1 PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_3116 conserved hypothetical membrane/transport protein; hypothetical protein 976583 4898574 Rsph17029_3845 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045697.1 975363 R 349101 CDS YP_001045698.1 126464585 4898885 complement(976979..977260) 1 NC_009050.1 hypothetical protein 977260 4898885 Rsph17029_3846 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045698.1 976979 R 349101 CDS YP_001045699.1 126464586 4898576 977308..977991 1 NC_009050.1 KEGG: rsp:RSP_3117 hypothetical protein; hypothetical protein 977991 4898576 Rsph17029_3847 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045699.1 977308 D 349101 CDS YP_001045700.1 126464587 4898978 complement(978064..979473) 1 NC_009050.1 KEGG: rsp:RSP_3118 hypothetical protein; hypothetical protein 979473 4898978 Rsph17029_3848 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045700.1 978064 R 349101 CDS YP_001045701.1 126464588 4898979 complement(979501..980076) 1 NC_009050.1 PFAM: protein of unknown function DUF1234; KEGG: rsp:RSP_3119 conserved hypothetical protein / putative esterase; hypothetical protein 980076 4898979 Rsph17029_3849 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045701.1 979501 R 349101 CDS YP_001045702.1 126464589 4898980 complement(980544..980993) 1 NC_009050.1 PFAM: DoxX family protein; KEGG: rsp:RSP_3120 hypothetical protein; DoxX family protein 980993 4898980 Rsph17029_3850 Rhodobacter sphaeroides ATCC 17029 DoxX family protein YP_001045702.1 980544 R 349101 CDS YP_001045703.1 126464590 4898565 complement(981076..981381) 1 NC_009050.1 KEGG: rsp:RSP_6238 hypothetical protein; hypothetical protein 981381 4898565 Rsph17029_3851 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045703.1 981076 R 349101 CDS YP_001045704.1 126464591 4898566 complement(981500..982474) 1 NC_009050.1 KEGG: rsp:RSP_3122 putative glutathione S-transferase; putative glutathione S-transferase 982474 4898566 Rsph17029_3852 Rhodobacter sphaeroides ATCC 17029 putative glutathione S-transferase YP_001045704.1 981500 R 349101 CDS YP_001045705.1 126464592 4898567 complement(982485..983315) 1 NC_009050.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: rsp:RSP_3123 hypothetical protein; extradiol ring-cleavage dioxygenase III subunit B 983315 4898567 Rsph17029_3853 Rhodobacter sphaeroides ATCC 17029 extradiol ring-cleavage dioxygenase III subunit B YP_001045705.1 982485 R 349101 CDS YP_001045706.1 126464593 4899000 983583..984479 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3124 transcriptional regulator, LysR family; LysR family transcriptional regulator 984479 4899000 Rsph17029_3854 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001045706.1 983583 D 349101 CDS YP_001045707.1 126464594 4899001 984533..984865 1 NC_009050.1 SMART: regulatory protein, ArsR; KEGG: rsp:RSP_3125 transcriptional regulator, ArsR familyy; regulatory protein ArsR 984865 4899001 Rsph17029_3855 Rhodobacter sphaeroides ATCC 17029 regulatory protein ArsR YP_001045707.1 984533 D 349101 CDS YP_001045708.1 126464595 4899002 984901..985953 1 NC_009050.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: rsp:RSP_3126 arsenite efflux pump, ACR3 family; arsenical-resistance protein 985953 4899002 Rsph17029_3856 Rhodobacter sphaeroides ATCC 17029 arsenical-resistance protein YP_001045708.1 984901 D 349101 CDS YP_001045709.1 126464596 4898242 985950..986381 1 NC_009050.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: rsp:RSP_3127 putative arsenate reductase; arsenate reductase 986381 4898242 Rsph17029_3857 Rhodobacter sphaeroides ATCC 17029 arsenate reductase YP_001045709.1 985950 D 349101 CDS YP_001045710.1 126464597 4898886 complement(986684..987631) 1 NC_009050.1 KEGG: rsp:RSP_3128 hypothetical protein; hypothetical protein 987631 4898886 Rsph17029_3859 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045710.1 986684 R 349101 CDS YP_001045711.1 126464598 4898244 complement(987628..988524) 1 NC_009050.1 hypothetical protein 988524 4898244 Rsph17029_3860 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045711.1 987628 R 349101 CDS YP_001045712.1 126464599 4898802 988802..989533 1 NC_009050.1 hypothetical protein 989533 4898802 Rsph17029_3861 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045712.1 988802 D 349101 CDS YP_001045713.1 126464600 4898803 989593..990051 1 NC_009050.1 hypothetical protein 990051 4898803 Rsph17029_3862 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045713.1 989593 D 349101 CDS YP_001045714.1 126464601 4898804 990065..991576 1 NC_009050.1 PFAM: Forkhead-associated protein; KEGG: sco:SCO6079 hypothetical protein; FHA domain-containing protein 991576 4898804 Rsph17029_3863 Rhodobacter sphaeroides ATCC 17029 FHA domain-containing protein YP_001045714.1 990065 D 349101 CDS YP_001045715.1 126464602 4898649 991598..992176 1 NC_009050.1 KEGG: jan:Jann_1605 FHA domain containing protein; hypothetical protein 992176 4898649 Rsph17029_3864 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045715.1 991598 D 349101 CDS YP_001045716.1 126464603 4898650 992184..993311 1 NC_009050.1 PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: jan:Jann_1606 protein serine/threonine phosphatases; protein phosphatase 2C domain-containing protein 993311 4898650 Rsph17029_3865 Rhodobacter sphaeroides ATCC 17029 protein phosphatase 2C domain-containing protein YP_001045716.1 992184 D 349101 CDS YP_001045717.1 126464604 4898997 993311..994432 1 NC_009050.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rsp:RSP_3129 serine/threonine protein kinase; protein kinase 994432 4898997 Rsph17029_3866 Rhodobacter sphaeroides ATCC 17029 protein kinase YP_001045717.1 993311 D 349101 CDS YP_001045718.1 126464605 4898998 994429..995643 1 NC_009050.1 PFAM: Forkhead-associated protein; peptidase S1 and S6, chymotrypsin/Hap; KEGG: rsp:RSP_3130 putative serine protease; forkhead-associated protein 995643 4898998 Rsph17029_3867 Rhodobacter sphaeroides ATCC 17029 forkhead-associated protein YP_001045718.1 994429 D 349101 CDS YP_001045719.1 126464606 4898999 995640..996359 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3131 ABC (antimicrobial peptide) transporter, ATPase subunit; ABC transporter 996359 4898999 Rsph17029_3868 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045719.1 995640 D 349101 CDS YP_001045720.1 126464607 4898523 996359..997549 1 NC_009050.1 KEGG: rsp:RSP_3132 putative membrane protein; hypothetical protein 997549 4898523 Rsph17029_3869 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045720.1 996359 D 349101 CDS YP_001045721.1 126464608 4898524 997542..999158 1 NC_009050.1 PFAM: protein of unknown function DUF323; KEGG: rsp:RSP_3133 hypothetical protein; hypothetical protein 999158 4898524 Rsph17029_3870 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045721.1 997542 D 349101 CDS YP_001045722.1 126464609 4898525 999177..999440 1 NC_009050.1 KEGG: rsp:RSP_6164 hypothetical protein; hypothetical protein 999440 4898525 Rsph17029_3871 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045722.1 999177 D 349101 CDS YP_001045723.1 126464610 4898875 999457..1000731 1 NC_009050.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rsp:RSP_3134 serine/threonine protein kinase; protein kinase 1000731 4898875 Rsph17029_3872 Rhodobacter sphaeroides ATCC 17029 protein kinase YP_001045723.1 999457 D 349101 CDS YP_001045724.1 126464611 4898876 1000728..1002623 1 NC_009050.1 KEGG: rsp:RSP_3135 PpkA-related protein; PpkA-related protein 1002623 4898876 Rsph17029_3873 Rhodobacter sphaeroides ATCC 17029 PpkA-related protein YP_001045724.1 1000728 D 349101 CDS YP_001045725.1 126464612 4898877 complement(1003056..1005419) 1 NC_009050.1 PFAM: Carbohydrate-binding, CenC domain protein domain protein; protein of unknown function DUF1593; KEGG: rsp:RSP_3136 hypothetical protein; hypothetical protein 1005419 4898877 Rsph17029_3874 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045725.1 1003056 R 349101 CDS YP_001045726.1 126464613 4898460 complement(1006044..1007648) 1 NC_009050.1 PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_3137 hypothetical protein; hypothetical protein 1007648 4898460 Rsph17029_3875 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045726.1 1006044 R 349101 CDS YP_001045727.1 126464614 4898461 1008307..1009146 1 NC_009050.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rsp:RSP_3138 Smp-30/Cgr1 family protein; SMP-30/gluconolaconase/LRE domain-containing protein 1009146 4898461 Rsph17029_3876 Rhodobacter sphaeroides ATCC 17029 SMP-30/gluconolaconase/LRE domain-containing protein YP_001045727.1 1008307 D 349101 CDS YP_001045728.1 126464615 4898462 1009745..1010326 1 NC_009050.1 KEGG: rsp:RSP_3140 hypothetical protein; hypothetical protein 1010326 4898462 Rsph17029_3877 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045728.1 1009745 D 349101 CDS YP_001045729.1 126464616 4898426 1010977..1011285 1 NC_009050.1 PFAM: protein of unknown function DUF485; KEGG: rsp:RSP_3141 hypothetical protein; hypothetical protein 1011285 4898426 Rsph17029_3878 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045729.1 1010977 D 349101 CDS YP_001045730.1 126464617 4898427 1011282..1013012 1 NC_009050.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 1013012 actP 4898427 actP Rhodobacter sphaeroides ATCC 17029 acetate permease YP_001045730.1 1011282 D 349101 CDS YP_001045731.1 126464618 4898428 complement(1013076..1013417) 1 NC_009050.1 PFAM: NIPSNAP family containing protein; KEGG: rsp:RSP_3143 hypothetical protein; NIPSNAP family protein 1013417 4898428 Rsph17029_3880 Rhodobacter sphaeroides ATCC 17029 NIPSNAP family protein YP_001045731.1 1013076 R 349101 CDS YP_001045732.1 126464619 4898511 complement(1013427..1014425) 1 NC_009050.1 PFAM: conserved hypothetical protein 698; KEGG: rsp:RSP_3144 hypothetical protein; hypothetical protein 1014425 4898511 Rsph17029_3881 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045732.1 1013427 R 349101 CDS YP_001045733.1 126464620 4898512 complement(1014422..1015102) 1 NC_009050.1 PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: rsp:RSP_3145 putative tartrate dehydratase beta subunit; Fe-S type hydro-lyases tartrate/fumarate beta region 1015102 4898512 Rsph17029_3882 Rhodobacter sphaeroides ATCC 17029 Fe-S type hydro-lyases tartrate/fumarate beta region YP_001045733.1 1014422 R 349101 CDS YP_001045734.1 126464621 4898513 complement(1015066..1016028) 1 NC_009050.1 TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: rsp:RSP_3146 putative tartrate dehydratase alpha subunit; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 1016028 4898513 Rsph17029_3883 Rhodobacter sphaeroides ATCC 17029 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_001045734.1 1015066 R 349101 CDS YP_001045735.1 126464622 4898774 complement(1016025..1017788) 1 NC_009050.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rsp:RSP_3147 putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit; L-aspartate oxidase 1017788 4898774 Rsph17029_3884 Rhodobacter sphaeroides ATCC 17029 L-aspartate oxidase YP_001045735.1 1016025 R 349101 CDS YP_001045736.1 126464623 4898775 complement(1017790..1018134) 1 NC_009050.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rsp:RSP_3148 putative succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase, cytochrome b subunit 1018134 4898775 Rsph17029_3885 Rhodobacter sphaeroides ATCC 17029 succinate dehydrogenase, cytochrome b subunit YP_001045736.1 1017790 R 349101 CDS YP_001045737.1 126464624 4898892 complement(1018131..1018466) 1 NC_009050.1 KEGG: rsp:RSP_3149 putative succinate dehydrogenase membrane anchor; putative succinate dehydrogenase membrane anchor 1018466 4898892 Rsph17029_3886 Rhodobacter sphaeroides ATCC 17029 putative succinate dehydrogenase membrane anchor YP_001045737.1 1018131 R 349101 CDS YP_001045738.1 126464625 4898893 complement(1018470..1019198) 1 NC_009050.1 KEGG: rsp:RSP_3150 succinate dehydrogenase/fumarate reductase Fe-S protein subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 1019198 4898893 Rsph17029_3887 Rhodobacter sphaeroides ATCC 17029 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_001045738.1 1018470 R 349101 CDS YP_001045739.1 126464626 4898894 complement(1019476..1020468) 1 NC_009050.1 KEGG: rsp:RSP_3151 ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 1020468 4898894 Rsph17029_3888 Rhodobacter sphaeroides ATCC 17029 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_001045739.1 1019476 R 349101 CDS YP_001045740.1 126464627 4898333 complement(1020468..1021475) 1 NC_009050.1 KEGG: rsp:RSP_3152 ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 1021475 4898333 Rsph17029_3889 Rhodobacter sphaeroides ATCC 17029 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_001045740.1 1020468 R 349101 CDS YP_001045741.1 126464628 4898334 complement(1021624..1022535) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3153 ABC nitrate/sulfonate/bicarbonate transporter family, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1022535 4898334 Rsph17029_3890 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045741.1 1021624 R 349101 CDS YP_001045742.1 126464629 4898335 complement(1022528..1023304) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3154 ABC nitrate/sulfonate/bicarbonate transporter family, ATPase subunit; ABC transporter 1023304 4898335 Rsph17029_3891 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045742.1 1022528 R 349101 CDS YP_001045743.1 126464630 4899180 complement(1023355..1025007) 1 NC_009050.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rsp:RSP_3155 thiamine pyrophosphate-requiring enzyme; thiamine pyrophosphate binding domain-containing protein 1025007 4899180 Rsph17029_3892 Rhodobacter sphaeroides ATCC 17029 thiamine pyrophosphate binding domain-containing protein YP_001045743.1 1023355 R 349101 CDS YP_001045744.1 126464631 4899181 1025189..1026085 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_6165 transcriptional regulator, LysR family; LysR family transcriptional regulator 1026085 4899181 Rsph17029_3893 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001045744.1 1025189 D 349101 CDS YP_001045745.1 126464632 4899182 1026098..1026859 1 NC_009050.1 PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_6166 hypothetical membrane protein; hypothetical protein 1026859 4899182 Rsph17029_3894 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045745.1 1026098 D 349101 CDS YP_001045746.1 126464633 4898851 complement(1026982..1028106) 1 NC_009050.1 PFAM: ABC-2 type transporter; KEGG: rsp:RSP_3157 ABC transporter, inner membrane subunit; ABC-2 type transporter 1028106 4898851 Rsph17029_3895 Rhodobacter sphaeroides ATCC 17029 ABC-2 type transporter YP_001045746.1 1026982 R 349101 CDS YP_001045747.1 126464634 4898852 complement(1028108..1030813) 1 NC_009050.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rsp:RSP_3159 ABC transporter, 2 fused ATPase and 1 inner membrane subunits; ABC transporter 1030813 4898852 Rsph17029_3896 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045747.1 1028108 R 349101 CDS YP_001045748.1 126464635 4898853 complement(1030818..1031813) 1 NC_009050.1 PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_3160 membrane fusion protein, HlyD family; secretion protein HlyD family protein 1031813 4898853 Rsph17029_3897 Rhodobacter sphaeroides ATCC 17029 secretion protein HlyD family protein YP_001045748.1 1030818 R 349101 CDS YP_001045749.1 126464636 4899146 complement(1032046..1034661) 1 NC_009050.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: rsp:RSP_3161 hypothetical protein; hypothetical protein 1034661 4899146 Rsph17029_3898 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045749.1 1032046 R 349101 CDS YP_001045750.1 126464637 4898904 complement(1035794..1036381) 1 NC_009050.1 KEGG: rsp:RSP_3162 hypothetical protein; hypothetical protein 1036381 4898904 Rsph17029_3900 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045750.1 1035794 R 349101 CDS YP_001045751.1 126464638 4899148 complement(1036389..1038524) 1 NC_009050.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_3163 probable oxidoreductase; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1038524 4899148 Rsph17029_3901 Rhodobacter sphaeroides ATCC 17029 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001045751.1 1036389 R 349101 CDS YP_001045752.1 126464639 4899114 complement(1038528..1038986) 1 NC_009050.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rsp:RSP_3164 ferredoxin like protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1038986 4899114 Rsph17029_3902 Rhodobacter sphaeroides ATCC 17029 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001045752.1 1038528 R 349101 CDS YP_001045753.1 126464640 4899115 complement(1039072..1039812) 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3165 transcriptional regulator, GntR family; GntR family transcriptional regulator 1039812 4899115 Rsph17029_3903 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045753.1 1039072 R 349101 CDS YP_001045754.1 126464641 4899116 complement(1039812..1040657) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3166 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1040657 4899116 Rsph17029_3904 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045754.1 1039812 R 349101 CDS YP_001045755.1 126464642 4898736 complement(1040654..1041469) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3167 ABC transporter, ATPase subunit; ABC transporter 1041469 4898736 Rsph17029_3905 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045755.1 1040654 R 349101 CDS YP_001045756.1 126464643 4898737 complement(1041469..1042500) 1 NC_009050.1 PFAM: WD-40 repeat protein; KEGG: rsp:RSP_3168 ABC transporter, periplasmic binding protein; WD-40 repeat-containing protein 1042500 4898737 Rsph17029_3906 Rhodobacter sphaeroides ATCC 17029 WD-40 repeat-containing protein YP_001045756.1 1041469 R 349101 CDS YP_001045757.1 126464644 4899038 1042722..1043420 1 NC_009050.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rsp:RSP_3169 FAA-hydrolase-family protein; fumarylacetoacetate (FAA) hydrolase 1043420 4899038 Rsph17029_3907 Rhodobacter sphaeroides ATCC 17029 fumarylacetoacetate (FAA) hydrolase YP_001045757.1 1042722 D 349101 CDS YP_001045758.1 126464645 4899039 1043426..1044037 1 NC_009050.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3170 demethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 1044037 4899039 Rsph17029_3908 Rhodobacter sphaeroides ATCC 17029 dimethylmenaquinone methyltransferase YP_001045758.1 1043426 D 349101 CDS YP_001045759.1 126464646 4899040 1044038..1044904 1 NC_009050.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rsp:RSP_3171 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 1044904 4899040 Rsph17029_3909 Rhodobacter sphaeroides ATCC 17029 6-phosphogluconate dehydrogenase YP_001045759.1 1044038 D 349101 CDS YP_001045760.1 126464647 4898981 1044904..1045737 1 NC_009050.1 PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_3172 hypothetical protein; hypothetical protein 1045737 4898981 Rsph17029_3910 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045760.1 1044904 D 349101 CDS YP_001045761.1 126464648 4898982 complement(1045760..1047259) 1 NC_009050.1 PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: rsp:RSP_3174 nucleoside transporter, NCS1 family; cytosine/purines uracil thiamine allantoin permease 1047259 4898982 Rsph17029_3911 Rhodobacter sphaeroides ATCC 17029 cytosine/purines uracil thiamine allantoin permease YP_001045761.1 1045760 R 349101 CDS YP_001045762.1 126464649 4898983 complement(1047492..1047917) 1 NC_009050.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3175 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1047917 4898983 Rsph17029_3912 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001045762.1 1047492 R 349101 CDS YP_001045763.1 126464650 4898206 complement(1048091..1048879) 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3176 enoyl-(acyl-carrier protein) reductase (NADH); short-chain dehydrogenase/reductase SDR 1048879 4898206 Rsph17029_3913 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045763.1 1048091 R 349101 CDS YP_001045764.1 126464651 4898207 complement(1048890..1050119) 1 NC_009050.1 PFAM: beta-ketoacyl synthase; KEGG: rsp:RSP_3177 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase 1050119 4898207 Rsph17029_3914 Rhodobacter sphaeroides ATCC 17029 beta-ketoacyl synthase YP_001045764.1 1048890 R 349101 CDS YP_001045765.1 126464652 4898208 complement(1050139..1050648) 1 NC_009050.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1050648 4898208 Rsph17029_3915 Rhodobacter sphaeroides ATCC 17029 3-hydroxydecanoyl-ACP dehydratase YP_001045765.1 1050139 R 349101 CDS YP_001045766.1 126464653 4898866 1050798..1051238 1 NC_009050.1 PFAM: ferric-uptake regulator; KEGG: rsp:RSP_3179 probable ferric-uptake regulator; ferric uptake regulator family protein 1051238 4898866 Rsph17029_3916 Rhodobacter sphaeroides ATCC 17029 ferric uptake regulator family protein YP_001045766.1 1050798 D 349101 CDS YP_001045767.1 126464654 4898867 1051369..1052181 1 NC_009050.1 PFAM: transglutaminase domain protein; KEGG: rsp:RSP_3180 transglutaminase-like enzyme; transglutaminase domain-containing protein 1052181 4898867 Rsph17029_3917 Rhodobacter sphaeroides ATCC 17029 transglutaminase domain-containing protein YP_001045767.1 1051369 D 349101 CDS YP_001045768.1 126464655 4898868 complement(1052185..1053366) 1 NC_009050.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rsp:RSP_3181 putative fatty-acyl-CoA racemase; CoA-transferase family III; L-carnitine dehydratase/bile acid-inducible protein F 1053366 4898868 Rsph17029_3918 Rhodobacter sphaeroides ATCC 17029 L-carnitine dehydratase/bile acid-inducible protein F YP_001045768.1 1052185 R 349101 CDS YP_001045769.1 126464656 4898943 complement(1053363..1054496) 1 NC_009050.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_3182 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1054496 4898943 Rsph17029_3919 Rhodobacter sphaeroides ATCC 17029 acyl-CoA dehydrogenase domain-containing protein YP_001045769.1 1053363 R 349101 CDS YP_001045770.1 126464657 4898944 complement(1054493..1055254) 1 NC_009050.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_3183 3-hydroxyacyl-CoA dehydrogenase type II; short-chain dehydrogenase/reductase SDR 1055254 4898944 Rsph17029_3920 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045770.1 1054493 R 349101 CDS YP_001045771.1 126464658 4898945 complement(1055254..1056414) 1 NC_009050.1 KEGG: rsp:RSP_3184 putative thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase 1056414 4898945 Rsph17029_3921 Rhodobacter sphaeroides ATCC 17029 acetyl-CoA acetyltransferase YP_001045771.1 1055254 R 349101 CDS YP_001045772.1 126464659 4898887 complement(1056575..1057900) 1 NC_009050.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1057900 4898887 Rsph17029_3922 Rhodobacter sphaeroides ATCC 17029 cobyrinic acid a,c-diamide synthase YP_001045772.1 1056575 R 349101 CDS YP_001045773.1 126464660 4898888 complement(1058130..1058807) 1 NC_009050.1 KEGG: rsp:RSP_3186 hypothetical protein; hypothetical protein 1058807 4898888 Rsph17029_3923 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045773.1 1058130 R 349101 CDS YP_001045774.1 126464661 4898889 1059360..1059770 1 NC_009050.1 KEGG: rsp:RSP_6237 hypothetical protein; hypothetical protein 1059770 4898889 Rsph17029_3924 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045774.1 1059360 D 349101 CDS YP_001045775.1 126464662 4898793 complement(1059859..1061442) 1 NC_009050.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 1061442 mdoD 4898793 mdoD Rhodobacter sphaeroides ATCC 17029 glucan biosynthesis protein D YP_001045775.1 1059859 R 349101 CDS YP_001045776.1 126464663 4898794 complement(1061708..1062808) 1 NC_009050.1 PFAM: ApbE family lipoprotein; KEGG: rsp:RSP_3188 ApbE family protein; ApbE family lipoprotein 1062808 4898794 Rsph17029_3926 Rhodobacter sphaeroides ATCC 17029 ApbE family lipoprotein YP_001045776.1 1061708 R 349101 CDS YP_001045777.1 126464664 4898795 complement(1062796..1063281) 1 NC_009050.1 PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: rsp:RSP_3188 ApbE family protein; sigma E positive regulator RseC/MucC 1063281 4898795 Rsph17029_3927 Rhodobacter sphaeroides ATCC 17029 sigma E positive regulator RseC/MucC YP_001045777.1 1062796 R 349101 CDS YP_001045778.1 126464665 4898442 complement(1063286..1063483) 1 NC_009050.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_3189 4Fe-4S ferredoxin; 4Fe-4S ferredoxin 1063483 4898442 Rsph17029_3928 Rhodobacter sphaeroides ATCC 17029 4Fe-4S ferredoxin YP_001045778.1 1063286 R 349101 CDS YP_001045779.1 126464666 4898443 complement(1063534..1063821) 1 NC_009050.1 PFAM: ferredoxin; KEGG: rsp:RSP_3190 2Fe-2S ferredoxin; ferredoxin 1063821 4898443 Rsph17029_3929 Rhodobacter sphaeroides ATCC 17029 ferredoxin YP_001045779.1 1063534 R 349101 CDS YP_001045780.1 126464667 4898444 complement(1063851..1065116) 1 NC_009050.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: rsp:RSP_3191 flavodoxin; beta-lactamase domain-containing protein 1065116 4898444 Rsph17029_3930 Rhodobacter sphaeroides ATCC 17029 beta-lactamase domain-containing protein YP_001045780.1 1063851 R 349101 CDS YP_001045781.1 126464668 4898487 1065632..1066213 1 NC_009050.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: rsp:RSP_3192 predicted NADH-ubiquinone oxidoreductase; subunit RnfA; Na(+)-translocating NADH-quinone reductase subunit E 1066213 4898487 Rsph17029_3931 Rhodobacter sphaeroides ATCC 17029 Na(+)-translocating NADH-quinone reductase subunit E YP_001045781.1 1065632 D 349101 CDS YP_001045782.1 126464669 4898488 1066233..1066799 1 NC_009050.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: rsp:RSP_3193 electron transport complex protein RnfB; RnfABCDGE type electron transport complex subunit B 1066799 4898488 Rsph17029_3932 Rhodobacter sphaeroides ATCC 17029 RnfABCDGE type electron transport complex subunit B YP_001045782.1 1066233 D 349101 CDS YP_001045783.1 126464670 4898489 1066796..1068349 1 NC_009050.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rsp:RSP_3194 4Fe-4S ferredoxin, RnfC; RnfABCDGE type electron transport complex subunit C 1068349 4898489 Rsph17029_3933 Rhodobacter sphaeroides ATCC 17029 RnfABCDGE type electron transport complex subunit C YP_001045783.1 1066796 D 349101 CDS YP_001045784.1 126464671 4898901 1068346..1069434 1 NC_009050.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: rsp:RSP_3195 RnfD protein; electron transport complex, RnfABCDGE type, D subunit 1069434 4898901 Rsph17029_3934 Rhodobacter sphaeroides ATCC 17029 electron transport complex, RnfABCDGE type, D subunit YP_001045784.1 1068346 D 349101 CDS YP_001045785.1 126464672 4898902 1069431..1070090 1 NC_009050.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: rsp:RSP_3196 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 1070090 4898902 Rsph17029_3935 Rhodobacter sphaeroides ATCC 17029 RnfABCDGE type electron transport complex subunit G YP_001045785.1 1069431 D 349101 CDS YP_001045786.1 126464673 4898903 1070107..1070841 1 NC_009050.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 1070841 4898903 Rsph17029_3936 Rhodobacter sphaeroides ATCC 17029 electron transport complex protein RsxE YP_001045786.1 1070107 D 349101 CDS YP_001045787.1 126464674 4898239 1070838..1071095 1 NC_009050.1 PFAM: protein of unknown function UPF0125; KEGG: rsp:RSP_3198 probable RnfH protein; hypothetical protein 1071095 4898239 Rsph17029_3937 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045787.1 1070838 D 349101 CDS YP_001045788.1 126464675 4898240 1071145..1072167 1 NC_009050.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3199 hypothetical protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1072167 4898240 Rsph17029_3938 Rhodobacter sphaeroides ATCC 17029 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001045788.1 1071145 D 349101 CDS YP_001045789.1 126464676 4898241 1072308..1073552 1 NC_009050.1 KEGG: rsp:RSP_3200 molecular chaperone, DnaK; molecular chaperone, DnaK 1073552 4898241 Rsph17029_3939 Rhodobacter sphaeroides ATCC 17029 molecular chaperone, DnaK YP_001045789.1 1072308 D 349101 CDS YP_001045790.1 126464677 4898327 complement(1073702..1074721) 1 NC_009050.1 PFAM: aldo/keto reductase; KEGG: rsp:RSP_3201 putative oxidoreductase; aldo/keto reductase 1074721 4898327 Rsph17029_3940 Rhodobacter sphaeroides ATCC 17029 aldo/keto reductase YP_001045790.1 1073702 R 349101 CDS YP_001045791.1 126464678 4898328 1074890..1075801 1 NC_009050.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; KEGG: rsp:RSP_3202 transcriptional regulator, AraC family; AraC-like transcriptional regulator 1075801 4898328 Rsph17029_3941 Rhodobacter sphaeroides ATCC 17029 AraC-like transcriptional regulator YP_001045791.1 1074890 D 349101 CDS YP_001045792.1 126464679 4898329 1076056..1077066 1 NC_009050.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: rsp:RSP_3203 transcriptional regulator, AraC family; AraC family transcriptional regulator 1077066 4898329 Rsph17029_3942 Rhodobacter sphaeroides ATCC 17029 AraC family transcriptional regulator YP_001045792.1 1076056 D 349101 CDS YP_001045793.1 126464680 4899120 1077230..1077751 1 NC_009050.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rsp:RSP_3204 putative oxidoreductase; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1077751 4899120 Rsph17029_3943 Rhodobacter sphaeroides ATCC 17029 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001045793.1 1077230 D 349101 CDS YP_001045794.1 126464681 4899121 1077748..1078731 1 NC_009050.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rsp:RSP_3205 putative oxidoreductase subunit; molybdopterin dehydrogenase 1078731 4899121 Rsph17029_3944 Rhodobacter sphaeroides ATCC 17029 molybdopterin dehydrogenase YP_001045794.1 1077748 D 349101 CDS YP_001045795.1 126464682 4899122 1078728..1080947 1 NC_009050.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_3206 putative xanthine dehydrogenase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1080947 4899122 Rsph17029_3945 Rhodobacter sphaeroides ATCC 17029 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_001045795.1 1078728 D 349101 CDS YP_001045796.1 126464683 4898412 1081212..1081982 1 NC_009050.1 KEGG: rsp:RSP_6168 ABC cobalt transporter, periplasmic binding protein CbiN; ABC cobalt transporter, periplasmic binding protein CbiN 1081982 4898412 Rsph17029_3946 Rhodobacter sphaeroides ATCC 17029 ABC cobalt transporter, periplasmic binding protein CbiN YP_001045796.1 1081212 D 349101 CDS YP_001045797.1 126464684 4898413 1081984..1082601 1 NC_009050.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1082601 4898413 Rsph17029_3947 Rhodobacter sphaeroides ATCC 17029 cobalt transport protein CbiM YP_001045797.1 1081984 D 349101 CDS YP_001045798.1 126464685 4898414 1082601..1083194 1 NC_009050.1 KEGG: rsp:RSP_3208 putative CbiL protein; putative CbiL protein 1083194 4898414 Rsph17029_3948 Rhodobacter sphaeroides ATCC 17029 putative CbiL protein YP_001045798.1 1082601 D 349101 CDS YP_001045799.1 126464686 4899076 1083191..1083901 1 NC_009050.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rsp:RSP_3209 ABC cobalt transporter, inner membrane subunit, CbiQ; cobalt ABC transporter, inner membrane subunit CbiQ 1083901 4899076 Rsph17029_3949 Rhodobacter sphaeroides ATCC 17029 cobalt ABC transporter, inner membrane subunit CbiQ YP_001045799.1 1083191 D 349101 CDS YP_001045800.1 126464687 4899077 1083898..1084662 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3211 ABC cobalt transporter, ATPase subunit, CbiO; ABC transporter 1084662 4899077 Rsph17029_3950 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045800.1 1083898 D 349101 CDS YP_001045801.1 126464688 4899078 complement(1084656..1085663) 1 NC_009050.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: rsp:RSP_3210 quinol oxidase subunit II QxtB; cytochrome d ubiquinol oxidase, subunit II 1085663 4899078 Rsph17029_3951 Rhodobacter sphaeroides ATCC 17029 cytochrome d ubiquinol oxidase, subunit II YP_001045801.1 1084656 R 349101 CDS YP_001045802.1 126464689 4899126 complement(1085665..1087062) 1 NC_009050.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: rsp:RSP_3212 quinol oxidase subunit I QxtA; cytochrome bd ubiquinol oxidase, subunit I 1087062 4899126 Rsph17029_3952 Rhodobacter sphaeroides ATCC 17029 cytochrome bd ubiquinol oxidase, subunit I YP_001045802.1 1085665 R 349101 CDS YP_001045803.1 126464690 4899127 complement(1087429..1088643) 1 NC_009050.1 KEGG: rsp:RSP_3213 hypothetical protein; hypothetical protein 1088643 4899127 Rsph17029_3953 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045803.1 1087429 R 349101 CDS YP_001045804.1 126464691 4899128 complement(1088884..1092264) 1 NC_009050.1 KEGG: rsp:RSP_3215 hypothetical protein; hypothetical protein 1092264 4899128 Rsph17029_3954 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045804.1 1088884 R 349101 CDS YP_001045805.1 126464692 4898768 complement(1092264..1093520) 1 NC_009050.1 PFAM: metallophosphoesterase; KEGG: rsp:RSP_3216 putative DNA repair exonuclease; metallophosphoesterase 1093520 4898768 Rsph17029_3955 Rhodobacter sphaeroides ATCC 17029 metallophosphoesterase YP_001045805.1 1092264 R 349101 CDS YP_001045806.1 126464693 4898769 1093866..1094558 1 NC_009050.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: rsp:RSP_3218 putative oxidoreductase NAD protein; cob(II)yrinic acid a,c-diamide reductase 1094558 4898769 Rsph17029_3956 Rhodobacter sphaeroides ATCC 17029 cob(II)yrinic acid a,c-diamide reductase YP_001045806.1 1093866 D 349101 CDS YP_001045807.1 126464694 4898770 complement(1094713..1094904) 1 NC_009050.1 KEGG: rsp:RSP_6169 hypothetical protein; hypothetical protein 1094904 4898770 Rsph17029_3957 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045807.1 1094713 R 349101 CDS YP_001045808.1 126464695 4898417 complement(1094989..1097088) 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Cache domain protein; KEGG: rsp:RSP_3217 cache sensor protein; multi-sensor signal transduction histidine kinase 1097088 4898417 Rsph17029_3958 Rhodobacter sphaeroides ATCC 17029 multi-sensor signal transduction histidine kinase YP_001045808.1 1094989 R 349101 CDS YP_001045809.1 126464696 4898418 1097717..1098664 1 NC_009050.1 PFAM: transport system permease protein; KEGG: rsp:RSP_3220 ABC ferric siderophore transporter, inner membrane subunit; transport system permease protein 1098664 4898418 Rsph17029_3959 Rhodobacter sphaeroides ATCC 17029 transport system permease protein YP_001045809.1 1097717 D 349101 CDS YP_001045810.1 126464697 4898419 1098657..1099601 1 NC_009050.1 PFAM: transport system permease protein; KEGG: rsp:RSP_3221 ABC ferric siderophore transporter, inner membrane subunit; transport system permease protein 1099601 4898419 Rsph17029_3960 Rhodobacter sphaeroides ATCC 17029 transport system permease protein YP_001045810.1 1098657 D 349101 CDS YP_001045811.1 126464698 4898753 1099598..1100356 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3222 ABC ferric siderophore transporter, ATPase subunit; ABC transporter 1100356 4898753 Rsph17029_3961 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045811.1 1099598 D 349101 CDS YP_001045812.1 126464699 4898754 1100467..1102563 1 NC_009050.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: atc:AGR_L_1858 outer membrane protein irgA precursor; TonB-dependent receptor 1102563 4898754 Rsph17029_3962 Rhodobacter sphaeroides ATCC 17029 TonB-dependent receptor YP_001045812.1 1100467 D 349101 CDS YP_001045813.1 126464700 4898755 1102670..1104286 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_3225 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase 1104286 4898755 Rsph17029_3963 Rhodobacter sphaeroides ATCC 17029 signal transduction histidine kinase YP_001045813.1 1102670 D 349101 CDS YP_001045814.1 126464701 4898454 1104595..1105287 1 NC_009050.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 1105287 4898454 Rsph17029_3964 Rhodobacter sphaeroides ATCC 17029 NAD-dependent deacetylase YP_001045814.1 1104595 D 349101 CDS YP_001045815.1 126464702 4898455 1105382..1106419 1 NC_009050.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: rsp:RSP_3227 lysine 2,3-aminomutase; lysine 2,3-aminomutase YodO family protein 1106419 4898455 Rsph17029_3965 Rhodobacter sphaeroides ATCC 17029 lysine 2,3-aminomutase YodO family protein YP_001045815.1 1105382 D 349101 CDS YP_001045816.1 126464703 4898456 1106475..1106870 1 NC_009050.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_3228 predicted mannose-6-phosphate isomerase; cupin 1106870 4898456 Rsph17029_3966 Rhodobacter sphaeroides ATCC 17029 cupin YP_001045816.1 1106475 D 349101 CDS YP_001045817.1 126464704 4898259 complement(1106905..1108146) 1 NC_009050.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_3229 membrane-bound lytic murein transglycosylase B; lytic murein transglycosylase 1108146 4898259 Rsph17029_3967 Rhodobacter sphaeroides ATCC 17029 lytic murein transglycosylase YP_001045817.1 1106905 R 349101 CDS YP_001045818.1 126464705 4898260 complement(1108488..1108697) 1 NC_009050.1 KEGG: rsp:RSP_3230 hypothetical protein; hypothetical protein 1108697 4898260 Rsph17029_3968 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045818.1 1108488 R 349101 CDS YP_001045819.1 126464706 4898261 1108929..1110527 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3231 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein 1110527 4898261 Rsph17029_3969 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045819.1 1108929 D 349101 CDS YP_001045820.1 126464707 4898915 1110595..1111602 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3232 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1111602 4898915 Rsph17029_3970 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045820.1 1110595 D 349101 CDS YP_001045821.1 126464708 4898916 1111610..1112512 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3233 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1112512 4898916 Rsph17029_3971 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045821.1 1111610 D 349101 CDS YP_001045822.1 126464709 4898917 1112517..1113365 1 NC_009050.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3235 ABC peptide transporter, ATPase subunit; ABC transporter 1113365 4898917 Rsph17029_3972 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045822.1 1112517 D 349101 CDS YP_001045823.1 126464710 4898637 1113365..1114213 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3236 ABC peptide transporter, ATPase subunit; ABC transporter 1114213 4898637 Rsph17029_3973 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045823.1 1113365 D 349101 CDS YP_001045824.1 126464711 4898638 1114367..1114762 1 NC_009050.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3237 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 1114762 4898638 Rsph17029_3974 Rhodobacter sphaeroides ATCC 17029 glyoxalase/bleomycin resistance protein/dioxygenase YP_001045824.1 1114367 D 349101 CDS YP_001045825.1 126464712 4898639 1114832..1116235 1 NC_009050.1 KEGG: rsp:RSP_3238 hypothetical protein; hypothetical protein 1116235 4898639 Rsph17029_3975 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045825.1 1114832 D 349101 CDS YP_001045826.1 126464713 4898813 complement(1116535..1117929) 1 NC_009050.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3240 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1117929 4898813 Rsph17029_3976 Rhodobacter sphaeroides ATCC 17029 integral membrane sensor signal transduction histidine kinase YP_001045826.1 1116535 R 349101 CDS YP_001045827.1 126464714 4898814 complement(1117926..1118600) 1 NC_009050.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3241 two-component transcriptional regulator, winged helix family; two component transcriptional regulator 1118600 4898814 Rsph17029_3977 Rhodobacter sphaeroides ATCC 17029 two component transcriptional regulator YP_001045827.1 1117926 R 349101 CDS YP_001045828.1 126464715 4898815 1118845..1120296 1 NC_009050.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rsp:RSP_3242 putative trypsin-like serine protease; protease Do 1120296 4898815 Rsph17029_3978 Rhodobacter sphaeroides ATCC 17029 protease Do YP_001045828.1 1118845 D 349101 CDS YP_001045829.1 126464716 4898184 1120523..1121215 1 NC_009050.1 hypothetical protein 1121215 4898184 Rsph17029_3979 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045829.1 1120523 D 349101 CDS YP_001045830.1 126464717 4898185 1121388..1122623 1 NC_009050.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_3245 possible transporter, major facilitator superfamily (MFS); major facilitator transporter 1122623 4898185 Rsph17029_3980 Rhodobacter sphaeroides ATCC 17029 major facilitator transporter YP_001045830.1 1121388 D 349101 CDS YP_001045831.1 126464718 4898186 1122747..1124297 1 NC_009050.1 intracellular enzymes acting on low molecular weight D-amino acid amides, esters and oligopeptides containing D-amino acids; these proteases release the N-terminal D-amino acid from a peptide, and show higher affinity for D-Ala, D-Ser or D-Thr; no preference for the stereochemistry of the second amino acid; D-aminopeptidase 1124297 4898186 Rsph17029_3981 Rhodobacter sphaeroides ATCC 17029 D-aminopeptidase YP_001045831.1 1122747 D 349101 CDS YP_001045832.1 126464719 4899129 complement(1124354..1125865) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3248 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein 1125865 4899129 Rsph17029_3982 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045832.1 1124354 R 349101 CDS YP_001045833.1 126464720 4899130 complement(1125862..1127535) 1 NC_009050.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3249 ABC peptide transporter, duplicated ATPase domains; ABC transporter 1127535 4899130 Rsph17029_3983 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045833.1 1125862 R 349101 CDS YP_001045834.1 126464721 4899131 complement(1127532..1128359) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3250 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 1128359 4899131 Rsph17029_3984 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045834.1 1127532 R 349101 CDS YP_001045835.1 126464722 4898256 complement(1128356..1129294) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3251 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1129294 4898256 Rsph17029_3985 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045835.1 1128356 R 349101 CDS YP_001045836.1 126464723 4898257 complement(1129562..1131340) 1 NC_009050.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3252 ABC peptide transporter, fused ATPase domains; ABC transporter related 1131340 4898257 Rsph17029_3986 Rhodobacter sphaeroides ATCC 17029 ABC transporter related YP_001045836.1 1129562 R 349101 CDS YP_001045837.1 126464724 4898258 complement(1131337..1132296) 1 NC_009050.1 PFAM: Acetamidase/Formamidase; KEGG: rsp:RSP_3253 predicted acetamidase / formamidase; acetamidase/formamidase 1132296 4898258 Rsph17029_3987 Rhodobacter sphaeroides ATCC 17029 acetamidase/formamidase YP_001045837.1 1131337 R 349101 CDS YP_001045838.1 126464725 4898698 complement(1132302..1133924) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3255 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein 1133924 4898698 Rsph17029_3988 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045838.1 1132302 R 349101 CDS YP_001045839.1 126464726 4898699 complement(1133946..1134866) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3257 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1134866 4898699 Rsph17029_3989 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045839.1 1133946 R 349101 CDS YP_001045840.1 126464727 4898700 complement(1134866..1135753) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3258 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1135753 4898700 Rsph17029_3990 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045840.1 1134866 R 349101 CDS YP_001045841.1 126464728 4898397 complement(1135731..1136330) 1 NC_009050.1 PFAM: ANTAR domain protein; KEGG: rsp:RSP_3259 transcription antitermination protein; response regulator receiver/ANTAR domain-containing protein 1136330 4898397 Rsph17029_3991 Rhodobacter sphaeroides ATCC 17029 response regulator receiver/ANTAR domain-containing protein YP_001045841.1 1135731 R 349101 CDS YP_001045842.1 126464729 4898398 complement(1136327..1137388) 1 NC_009050.1 KEGG: rsp:RSP_3260 putative negative amidase regulator, AmiC; putative negative amidase regulator, AmiC 1137388 4898398 Rsph17029_3992 Rhodobacter sphaeroides ATCC 17029 putative negative amidase regulator, AmiC YP_001045842.1 1136327 R 349101 CDS YP_001045843.1 126464730 4898399 1137723..1139105 1 NC_009050.1 PFAM: aminotransferase class-III; KEGG: rsp:RSP_3261 hypothetical protein; aminotransferase 1139105 4898399 Rsph17029_3993 Rhodobacter sphaeroides ATCC 17029 aminotransferase YP_001045843.1 1137723 D 349101 CDS YP_001045844.1 126464731 4898227 1139109..1139540 1 NC_009050.1 PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_3262 putative thioesterase; thioesterase superfamily protein 1139540 4898227 Rsph17029_3994 Rhodobacter sphaeroides ATCC 17029 thioesterase superfamily protein YP_001045844.1 1139109 D 349101 CDS YP_001045845.1 126464732 4898228 complement(1139722..1140264) 1 NC_009050.1 PFAM: blue (type 1) copper domain protein; KEGG: rsp:RSP_3263 putative copper binding protein; blue (type1) copper domain-containing protein 1140264 4898228 Rsph17029_3995 Rhodobacter sphaeroides ATCC 17029 blue (type1) copper domain-containing protein YP_001045845.1 1139722 R 349101 CDS YP_001045846.1 126464733 4898229 complement(1140360..1140791) 1 NC_009050.1 PFAM: cytochrome c, class I; KEGG: rsp:RSP_3264 probable C-type cytochrome; cytochrome c, class I 1140791 4898229 Rsph17029_3996 Rhodobacter sphaeroides ATCC 17029 cytochrome c, class I YP_001045846.1 1140360 R 349101 CDS YP_001045847.1 126464734 4898842 complement(1140951..1141337) 1 NC_009050.1 KEGG: rsp:RSP_3265 hypothetical protein; hypothetical protein 1141337 4898842 Rsph17029_3997 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045847.1 1140951 R 349101 CDS YP_001045848.1 126464735 4898843 complement(1141345..1141836) 1 NC_009050.1 KEGG: rsp:RSP_6171 hypothetical protein; hypothetical protein 1141836 4898843 Rsph17029_3998 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045848.1 1141345 R 349101 CDS YP_001045849.1 126464736 4898844 1141949..1142944 1 NC_009050.1 PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: rsp:RSP_3266 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-1,6-bisphosphatase 1142944 4898844 Rsph17029_3999 Rhodobacter sphaeroides ATCC 17029 inositol phosphatase/fructose-1,6-bisphosphatase YP_001045849.1 1141949 D 349101 CDS YP_001045850.1 126464737 4899139 1142948..1143826 1 NC_009050.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: rsp:RSP_3267 phosphoribulokinase; phosphoribulokinase 1143826 4899139 Rsph17029_4000 Rhodobacter sphaeroides ATCC 17029 phosphoribulokinase YP_001045850.1 1142948 D 349101 CDS YP_001045851.1 126464738 4899140 1143907..1145880 1 NC_009050.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1145880 4899140 Rsph17029_4001 Rhodobacter sphaeroides ATCC 17029 transketolase YP_001045851.1 1143907 D 349101 CDS YP_001045852.1 126464739 4899141 1145891..1146892 1 NC_009050.1 KEGG: rsp:RSP_3269 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 1146892 4899141 Rsph17029_4002 Rhodobacter sphaeroides ATCC 17029 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001045852.1 1145891 D 349101 CDS YP_001045853.1 126464740 4899143 1146974..1148038 1 NC_009050.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 1148038 4899143 Rsph17029_4003 Rhodobacter sphaeroides ATCC 17029 fructose-1,6-bisphosphate aldolase YP_001045853.1 1146974 D 349101 CDS YP_001045854.1 126464741 4899144 1148065..1149444 1 NC_009050.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 1149444 4899144 Rsph17029_4004 Rhodobacter sphaeroides ATCC 17029 ribulose bisphosphate carboxylase YP_001045854.1 1148065 D 349101 CDS YP_001045855.1 126464742 4899145 complement(1149521..1151302) 1 NC_009050.1 KEGG: rsp:RSP_3272 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1151302 4899145 Rsph17029_4005 Rhodobacter sphaeroides ATCC 17029 gamma-glutamyltransferase YP_001045855.1 1149521 R 349101 CDS YP_001045856.1 126464743 4898469 complement(1151381..1152142) 1 NC_009050.1 PFAM: ABC-2 type transporter; KEGG: rsp:RSP_3273 ABC multidrug/carbohydrate efflux transporter, inner membrane subunit; ABC-2 type transporter 1152142 4898469 Rsph17029_4006 Rhodobacter sphaeroides ATCC 17029 ABC-2 type transporter YP_001045856.1 1151381 R 349101 CDS YP_001045857.1 126464744 4898470 complement(1152139..1153065) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3274 ABC multidrug/carbohydrate efflux transporter, ATPase subunit; ABC transporter 1153065 4898470 Rsph17029_4007 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045857.1 1152139 R 349101 CDS YP_001045858.1 126464745 4898471 1153281..1154252 1 NC_009050.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_3275 MoxR-like ATPase; ATPase 1154252 4898471 Rsph17029_4008 Rhodobacter sphaeroides ATCC 17029 ATPase YP_001045858.1 1153281 D 349101 CDS YP_001045859.1 126464746 4898912 1154252..1155103 1 NC_009050.1 KEGG: rsp:RSP_3276 hypothetical protein; hypothetical protein 1155103 4898912 Rsph17029_4009 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045859.1 1154252 D 349101 CDS YP_001045860.1 126464747 4898913 1155100..1155459 1 NC_009050.1 KEGG: rsp:RSP_6252 hypothetical protein; hypothetical protein 1155459 4898913 Rsph17029_4010 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045860.1 1155100 D 349101 CDS YP_001045861.1 126464748 4898914 1155452..1156438 1 NC_009050.1 PFAM: von Willebrand factor, type A; KEGG: rsp:RSP_3278 Von Willebrand domain containing protein; von Willebrand factor, type A 1156438 4898914 Rsph17029_4011 Rhodobacter sphaeroides ATCC 17029 von Willebrand factor, type A YP_001045861.1 1155452 D 349101 CDS YP_001045862.1 126464749 4899046 1156435..1157370 1 NC_009050.1 KEGG: rsp:RSP_3280 hypothetical protein; hypothetical protein 1157370 4899046 Rsph17029_4012 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045862.1 1156435 D 349101 CDS YP_001045863.1 126464750 4899047 1157370..1157966 1 NC_009050.1 KEGG: rsp:RSP_3281 hypothetical protein; hypothetical protein 1157966 4899047 Rsph17029_4013 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045863.1 1157370 D 349101 CDS YP_001045864.1 126464751 4899048 1157960..1159120 1 NC_009050.1 KEGG: rsp:RSP_3282 hypothetical protein; hypothetical protein 1159120 4899048 Rsph17029_4014 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045864.1 1157960 D 349101 CDS YP_001045865.1 126464752 4898568 1159184..1160188 1 NC_009050.1 PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rsp:RSP_3283 myo-inositol 2-dehydrogenase; inositol 2-dehydrogenase 1160188 4898568 Rsph17029_4015 Rhodobacter sphaeroides ATCC 17029 inositol 2-dehydrogenase YP_001045865.1 1159184 D 349101 CDS YP_001045866.1 126464753 4898569 1160350..1162194 1 NC_009050.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rsp:RSP_3284 acetolactate synthase; thiamine pyrophosphate enzyme, central region 1162194 4898569 Rsph17029_4016 Rhodobacter sphaeroides ATCC 17029 thiamine pyrophosphate enzyme, central region YP_001045866.1 1160350 D 349101 CDS YP_001045867.1 126464754 4898570 1162204..1163112 1 NC_009050.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_3285 possible sugar phosphate isomerase/epimerase, IolE; xylose isomerase domain-containing protein 1163112 4898570 Rsph17029_4017 Rhodobacter sphaeroides ATCC 17029 xylose isomerase domain-containing protein YP_001045867.1 1162204 D 349101 CDS YP_001045868.1 126464755 4898954 1163207..1164013 1 NC_009050.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rsp:RSP_3286 uncharacterized enzyme involved in inositol metabolism, IolB; myo-inositol catabolism IolB domain-containing protein 1164013 4898954 Rsph17029_4018 Rhodobacter sphaeroides ATCC 17029 myo-inositol catabolism IolB domain-containing protein YP_001045868.1 1163207 D 349101 CDS YP_001045869.1 126464756 4898955 complement(1164296..1165345) 1 NC_009050.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 1165345 ugpC 4898955 ugpC Rhodobacter sphaeroides ATCC 17029 glycerol-3-phosphate transporter ATP-binding subunit YP_001045869.1 1164296 R 349101 CDS YP_001045870.1 126464757 4898956 complement(1165346..1166194) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3288 ABC glycerol-3-phosphate transporter, inner membrane subunit UgpE; binding-protein-dependent transport system inner membrane protein 1166194 4898956 Rsph17029_4020 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045870.1 1165346 R 349101 CDS YP_001045871.1 126464758 4898727 complement(1166202..1167083) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3289 ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA; binding-protein-dependent transport system inner membrane protein 1167083 4898727 Rsph17029_4021 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045871.1 1166202 R 349101 CDS YP_001045872.1 126464759 4898728 complement(1167130..1168425) 1 NC_009050.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3290 ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB; extracellular solute-binding protein 1168425 4898728 Rsph17029_4022 Rhodobacter sphaeroides ATCC 17029 extracellular solute-binding protein YP_001045872.1 1167130 R 349101 CDS YP_001045873.1 126464760 4898729 complement(1168625..1170310) 1 NC_009050.1 PFAM: Na+/Pi-cotransporter; PhoU family protein; KEGG: rsp:RSP_3291 putative Na+/phosphate symporter; Na+/Pi-cotransporter 1170310 4898729 Rsph17029_4023 Rhodobacter sphaeroides ATCC 17029 Na+/Pi-cotransporter YP_001045873.1 1168625 R 349101 CDS YP_001045874.1 126464761 4899060 complement(1170380..1171981) 1 NC_009050.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rsp:RSP_3292 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 1171981 4899060 Rsph17029_4024 Rhodobacter sphaeroides ATCC 17029 glucose-methanol-choline oxidoreductase YP_001045874.1 1170380 R 349101 CDS YP_001045875.1 126464762 4899061 complement(1171983..1172981) 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3293 ABC branched-chain amino acid transporter, inner membrane subunit; inner-membrane translocator 1172981 4899061 Rsph17029_4025 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045875.1 1171983 R 349101 CDS YP_001045876.1 126464763 4899062 complement(1172983..1173870) 1 NC_009050.1 PFAM: inner-membrane translocator; KEGG: rsp:RSP_3294 ABC branched-chain amino acid transporter, inner membrane subunit; inner-membrane translocator 1173870 4899062 Rsph17029_4026 Rhodobacter sphaeroides ATCC 17029 inner-membrane translocator YP_001045876.1 1172983 R 349101 CDS YP_001045877.1 126464764 4898628 complement(1173872..1174570) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3295 ABC branched-chain amino acid transporter, ATPase subunit; ABC transporter 1174570 4898628 Rsph17029_4027 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045877.1 1173872 R 349101 CDS YP_001045878.1 126464765 4898629 complement(1174567..1175340) 1 NC_009050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3296 ABC branched-chain amino acid transporter, ATPase subunit; ABC transporter 1175340 4898629 Rsph17029_4028 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045878.1 1174567 R 349101 CDS YP_001045879.1 126464766 4898630 complement(1175343..1176545) 1 NC_009050.1 KEGG: rsp:RSP_3297 ABC branched-chain amino acid transporter, periplasmic binding protein; ABC branched-chain amino acid transporter, periplasmic binding protein 1176545 4898630 Rsph17029_4029 Rhodobacter sphaeroides ATCC 17029 ABC branched-chain amino acid transporter, periplasmic binding protein YP_001045879.1 1175343 R 349101 CDS YP_001045880.1 126464767 4898951 1176752..1177693 1 NC_009050.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3298 transcriptional regulator, LysR family; LysR family transcriptional regulator 1177693 4898951 Rsph17029_4030 Rhodobacter sphaeroides ATCC 17029 LysR family transcriptional regulator YP_001045880.1 1176752 D 349101 CDS YP_001045881.1 126464768 4898952 1177773..1179782 1 NC_009050.1 KEGG: rsp:RSP_6235 hypothetical protein; hypothetical protein 1179782 4898952 Rsph17029_4031 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045881.1 1177773 D 349101 CDS YP_001045882.1 126464769 4898953 1179816..1180862 1 NC_009050.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rsp:RSP_3299 TRAP-T family transporter, periplasmic binding component; TRAP transporter solute receptor TAXI family protein 1180862 4898953 Rsph17029_4032 Rhodobacter sphaeroides ATCC 17029 TRAP transporter solute receptor TAXI family protein YP_001045882.1 1179816 D 349101 CDS YP_001045883.1 126464770 4898373 1180999..1181754 1 NC_009050.1 PFAM: protein of unknown function DUF1194; KEGG: rsp:RSP_6253 hypothetical protein; hypothetical protein 1181754 4898373 Rsph17029_4033 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045883.1 1180999 D 349101 CDS YP_001045884.1 126464771 4898374 1181813..1182421 1 NC_009050.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 1182421 4898374 Rsph17029_4034 Rhodobacter sphaeroides ATCC 17029 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_001045884.1 1181813 D 349101 CDS YP_001045885.1 126464772 4898375 1182581..1182946 1 NC_009050.1 PFAM: response regulator receiver; KEGG: rsp:RSP_3302 chemotaxis response regulator, CheY4; response regulator receiver protein 1182946 4898375 Rsph17029_4035 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001045885.1 1182581 D 349101 CDS YP_001045886.1 126464773 4898975 1183047..1184651 1 NC_009050.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3303 putative methyl accepting chemotaxis protein, McpG; methyl-accepting chemotaxis sensory transducer 1184651 4898975 Rsph17029_4036 Rhodobacter sphaeroides ATCC 17029 methyl-accepting chemotaxis sensory transducer YP_001045886.1 1183047 D 349101 CDS YP_001045887.1 126464774 4898976 complement(1184685..1184981) 1 NC_009050.1 KEGG: rsp:RSP_6236 hypothetical protein; hypothetical protein 1184981 4898976 Rsph17029_4037 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045887.1 1184685 R 349101 CDS YP_001045888.1 126464775 4898977 1185206..1186561 1 NC_009050.1 PFAM: ABC-1 domain protein; KEGG: rsp:RSP_3305 putative ubiquinol-cytochrome-c reductase assembly protein; hypothetical protein 1186561 4898977 Rsph17029_4038 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045888.1 1185206 D 349101 CDS YP_001045889.1 126464776 4899019 1186673..1187185 1 NC_009050.1 KEGG: rsp:RSP_3306 hypothetical protein; hypothetical protein 1187185 4899019 Rsph17029_4039 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045889.1 1186673 D 349101 CDS YP_001045890.1 126464777 4899020 1187438..1187698 1 NC_009050.1 PFAM: WGR domain protein; KEGG: rsp:RSP_3307 hypothetical protein; WGR domain-containing protein 1187698 4899020 Rsph17029_4040 Rhodobacter sphaeroides ATCC 17029 WGR domain-containing protein YP_001045890.1 1187438 D 349101 CDS YP_001045891.1 126464778 4899021 complement(1188239..1189162) 1 NC_009050.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_3308 possible transporter, DME family, DMT superfamily; hypothetical protein 1189162 4899021 Rsph17029_4041 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045891.1 1188239 R 349101 CDS YP_001045892.1 126464779 4898233 complement(1189235..1190026) 1 NC_009050.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rsp:RSP_3309 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 1190026 4898233 Rsph17029_4042 Rhodobacter sphaeroides ATCC 17029 helix-turn-helix domain-containing protein YP_001045892.1 1189235 R 349101 CDS YP_001045893.1 126464780 4898234 1190069..1190746 1 NC_009050.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: eli:ELI_13810 hypothetical oxidoreductase, short chaindehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 1190746 4898234 Rsph17029_4043 Rhodobacter sphaeroides ATCC 17029 short-chain dehydrogenase/reductase SDR YP_001045893.1 1190069 D 349101 CDS YP_001045894.1 126464781 4899138 complement(1191685..1192329) 1 NC_009050.1 PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3317 transcriptional regulator, TetR family; TetR family transcriptional regulator 1192329 4899138 Rsph17029_4044 Rhodobacter sphaeroides ATCC 17029 TetR family transcriptional regulator YP_001045894.1 1191685 R 349101 CDS YP_001045895.1 126464782 4898677 complement(1192354..1195473) 1 NC_009050.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rsp:RSP_3318 cation/multidrug efflux pump, RND family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1195473 4898677 Rsph17029_4045 Rhodobacter sphaeroides ATCC 17029 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001045895.1 1192354 R 349101 CDS YP_001045896.1 126464783 4898678 complement(1195490..1196653) 1 NC_009050.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_3321 cation/multidrug efflux pump, membrane-fusion protein; RND family efflux transporter MFP subunit 1196653 4898678 Rsph17029_4046 Rhodobacter sphaeroides ATCC 17029 RND family efflux transporter MFP subunit YP_001045896.1 1195490 R 349101 CDS YP_001045897.1 126464784 4898679 complement(1196750..1198585) 1 NC_009050.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_3322 acetoin transcriptional regulator, sigma54 specific, AcoR; Fis family GAF modulated sigma54 specific transcriptional regulator 1198585 4898679 Rsph17029_4047 Rhodobacter sphaeroides ATCC 17029 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001045897.1 1196750 R 349101 CDS YP_001045898.1 126464785 4899026 1198821..1200623 1 NC_009050.1 KEGG: rsp:RSP_3323 putative flavoprotein containing monooxygenase involved in K+ transport; putative flavoprotein containing monooxygenase involved in K+ transport 1200623 4899026 Rsph17029_4048 Rhodobacter sphaeroides ATCC 17029 putative flavoprotein containing monooxygenase involved in K+ transport YP_001045898.1 1198821 D 349101 CDS YP_001045899.1 126464786 4899027 1201137..1201964 1 NC_009050.1 PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_3324 transcriptional regulator, LuxR family; response regulator receiver protein 1201964 4899027 Rsph17029_4049 Rhodobacter sphaeroides ATCC 17029 response regulator receiver protein YP_001045899.1 1201137 D 349101 CDS YP_001045900.1 126464787 4899028 1202114..1203619 1 NC_009050.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rsp:RSP_3325 polysaccharide export transporter, PST family; polysaccharide biosynthesis protein 1203619 4899028 Rsph17029_4050 Rhodobacter sphaeroides ATCC 17029 polysaccharide biosynthesis protein YP_001045900.1 1202114 D 349101 CDS YP_001045901.1 126464788 4898556 complement(1203633..1204106) 1 NC_009050.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rsp:RSP_3326 low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 1204106 4898556 Rsph17029_4051 Rhodobacter sphaeroides ATCC 17029 protein tyrosine phosphatase YP_001045901.1 1203633 R 349101 CDS YP_001045902.1 126464789 4898557 complement(1204250..1204909) 1 NC_009050.1 PFAM: Rhomboid family protein; KEGG: rsp:RSP_3327 possible rhomboid family membrane protein; rhomboid family protein 1204909 4898557 Rsph17029_4052 Rhodobacter sphaeroides ATCC 17029 rhomboid family protein YP_001045902.1 1204250 R 349101 CDS YP_001045903.1 126464790 4898558 complement(1205057..1205968) 1 NC_009050.1 KEGG: rsp:RSP_3328 hypothetical protein; hypothetical protein 1205968 4898558 Rsph17029_4053 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045903.1 1205057 R 349101 CDS YP_001045904.1 126464791 4898935 complement(1206209..1206382) 1 NC_009050.1 PFAM: protein of unknown function DUF465; KEGG: rsp:RSP_6254 hypothetical protein; hypothetical protein 1206382 4898935 Rsph17029_4054 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045904.1 1206209 R 349101 CDS YP_001045905.1 126464792 4898936 1206907..1207596 1 NC_009050.1 KEGG: rsp:RSP_3329 hypothetical protein; hypothetical protein 1207596 4898936 Rsph17029_4055 Rhodobacter sphaeroides ATCC 17029 hypothetical protein YP_001045905.1 1206907 D 349101 CDS YP_001045906.1 126464793 4898937 1208099..1209877 1 NC_009050.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: rsp:RSP_3330 putative sodium/sulfate transporter, DASS family; TrkA domain-containing protein 1209877 4898937 Rsph17029_4056 Rhodobacter sphaeroides ATCC 17029 TrkA domain-containing protein YP_001045906.1 1208099 D 349101 CDS YP_001045907.1 126464794 4898514 complement(1210011..1210475) 1 NC_009050.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_3331 cupin domain containg protein; cupin 1210475 4898514 Rsph17029_4057 Rhodobacter sphaeroides ATCC 17029 cupin YP_001045907.1 1210011 R 349101 CDS YP_001045908.1 126464795 4898515 complement(1210533..1211249) 1 NC_009050.1 PFAM: LrgB family protein; KEGG: rsp:RSP_3332 putative transmembrane protein; LrgB family protein 1211249 4898515 Rsph17029_4058 Rhodobacter sphaeroides ATCC 17029 LrgB family protein YP_001045908.1 1210533 R 349101 CDS YP_001045909.1 126464796 4898516 complement(1211242..1211595) 1 NC_009050.1 PFAM: LrgA family protein; KEGG: rsp:RSP_3333 putative holin-like protein; LrgA family protein 1211595 4898516 Rsph17029_4059 Rhodobacter sphaeroides ATCC 17029 LrgA family protein YP_001045909.1 1211242 R 349101 CDS YP_001045910.1 126464797 4898747 complement(1211705..1212361) 1 NC_009050.1 PFAM: Asp/Glu racemase; KEGG: rsp:RSP_3334 HyuE hydantoin racemase; Asp/Glu racemase 1212361 4898747 Rsph17029_4060 Rhodobacter sphaeroides ATCC 17029 Asp/Glu racemase YP_001045910.1 1211705 R 349101 CDS YP_001045911.1 126464798 4898748 complement(1212362..1213198) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3335 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1213198 4898748 Rsph17029_4061 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport system inner membrane protein YP_001045911.1 1212362 R 349101 CDS YP_001045912.1 126464799 4898749 complement(1213200..1214063) 1 NC_009050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3336 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 1214063 4898749 Rsph17029_4062 Rhodobacter sphaeroides ATCC 17029 binding-protein-dependent transport systems inner membrane component YP_001045912.1 1213200 R 349101 CDS YP_001045913.1 126464800 4898984 complement(1214297..1215562) 1 NC_009050.1 KEGG: rsp:RSP_3337 ABC spermidine/putrescine transporter, periplasmic binding protein; ABC spermidine/putrescine transporter, periplasmic binding protein 1215562 4898984 Rsph17029_4063 Rhodobacter sphaeroides ATCC 17029 ABC spermidine/putrescine transporter, periplasmic binding protein YP_001045913.1 1214297 R 349101 CDS YP_001045914.1 126464801 4898985 complement(1215588..1216565) 1 NC_009050.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3338 ABC spermidine/putrescine transporter, ATPase subunit; ABC transporter 1216565 4898985 Rsph17029_4064 Rhodobacter sphaeroides ATCC 17029 ABC transporter YP_001045914.1 1215588 R 349101 CDS YP_001045915.1 126464802 4898986 1216777..1217490 1 NC_009050.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3339 transcriptional regulator, GntR family; GntR family transcriptional regulator 1217490 4898986 Rsph17029_4065 Rhodobacter sphaeroides ATCC 17029 GntR family transcriptional regulator YP_001045915.1 1216777 D 349101 CDS YP_001045916.1 126464803 4898223 1217669..1218106 1 NC_009050.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rsp:RSP_3341 hypothetical protein; BadM/Rrf2 family transcriptional regulator 1218106 4898223 Rsph17029_4066 Rhodobacter sphaeroides ATCC 17029 BadM/Rrf2 family transcriptional regulator YP_001045916.1 1217669 D 349101 CDS YP_001045917.1 126464804 4898224 complement(1218103..1219002) 1 NC_009050.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_3340 possible transporter, RarD, DMT superfamily; transporter DMT superfamily protein 1219002 4898224 Rsph17029_4067 Rhodobacter sphaeroides ATCC 17029 transporter DMT superfamily protein YP_001045917.1 1218103 R 349101 CDS